Revision of the genus Placospongia (Porifera, Demospongiae, Hadromerida, Placospongiidae in the Indo-West Pacific

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Leontine Becking

2013-05-01

Full Text Available Species of the genus Placospongia are common within the tropical Indo-West Pacific, demonstrating a wide variety of colors and either branching or encrusting growth forms. A revision of Indo-West Pacific Placospongia was undertaken based on a redescription of the holotypes of species of Placospongia from the Indian Ocean and Western Pacific and an examination of an additional 103 specimens of Placospongia ssp. collected from Indonesia (including Vosmaer and Vernhout 1902 material, Seychelles, India, Singapore and Micronesia. One mitochondrial (COI and one nuclear (ITS marker were subsequently used to differentiate species. All Placospongia species are characterized by selenasters and tylostyles in two size classes. The combination of microsclere diversity and morphology as well as megasclere size were shown to be informative morphometric characters, supported by molecular evidence. Live coloration and growth form is shown to be unreliable for diagnoses. The study of holotypes found that P. mixta is a valid species and that two genus transfers are necessary: Geodinella anthosigma is a Placospongia and P. labyrinthica is a Geodia. A new species is also described from an anchialine pool in Indonesia, Placospongia santodomingoae sp. n.; bringing the total fauna of Placospongia species in the Indo-West Pacific to five: Placospongia anthosigma, Placospongia carinata, Placospongia mixta, Placospongia melobesioides, and Placospongia santodomingoae sp.n. An identification key is given. Two additional species, possibly morphologically cryptic, have been identified by molecular markers.

Revision of the genus Placospongia (Porifera, Demospongiae, Hadromerida, Placospongiidae) in the Indo-West Pacific.

Science.gov (United States)

Becking, Leontine E

2013-01-01

Species of the genus Placospongia are common within the tropical Indo-West Pacific, demonstrating a wide variety of colors and either branching or encrusting growth forms. A revision of Indo-West Pacific Placospongia was undertaken based on a redescription of the holotypes of species of Placospongia from the Indian Ocean and Western Pacific and an examination of an additional 103 specimens of Placospongia ssp. collected from Indonesia (including Vosmaer and Vernhout 1902 material), Seychelles, India, Singapore and Micronesia. One mitochondrial (COI) and one nuclear (ITS) marker were subsequently used to differentiate species. All Placospongia species are characterized by selenasters and tylostyles in two size classes. The combination of microsclere diversity and morphology as well as megasclere size were shown to be informative morphometric characters, supported by molecular evidence. Live coloration and growth form is shown to be unreliable for diagnoses. The study of holotypes found that Placospongia mixta is a valid species and that two genus transfers are necessary: Geodinella anthosigma is a Placospongia and Placospongia labyrinthica is a Geodia. A new species is also described from an anchialine pool in Indonesia, Placospongia santodomingoae sp. n.; bringing the total fauna of Placospongia species in the Indo-West Pacific to five: Placospongia anthosigma, Placospongia carinata, Placospongia mixta, Placospongia melobesioides, and Placospongia santodomingoae sp. n. An identification key is given. Two additional species, possibly morphologically cryptic, have been identified by molecular markers.

Forced Climate Changes in West Antarctica and the Indo-Pacific by Northern Hemisphere Ice Sheet Topography

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Jones, T. R.; Roberts, W. H. G.; Steig, E. J.; Cuffey, K. M.; Markle, B. R.; White, J. W. C.

2017-12-01

The behavior of the Indo-Pacific climate system across the last deglaciation is widely debated. Resolving these debates requires long term and continuous climate proxy records. Here, we use an ultra-high resolution and continuous water isotope record from an ice core in the Pacific sector of West Antarctica. In conjunction with the HadCM3 coupled ocean-atmosphere GCM, we demonstrate that the climate of both West Antarctica and the Indo-Pacific were substantially altered during the last deglaciation by the same forcing mechanism. Critically, these changes are not dependent on ENSO strength, but rather the location of deep tropical convection, which shifts at 16 ka in response to climate perturbations induced by the Laurentide Ice Sheet. The changed rainfall patterns in the tropics explain the deglacial shift from expanded-grasslands to rainforest-dominated ecosystems in Indonesia. High-frequency climate variability in the Southern Hemisphere is also changed, through a tropical Pacific teleconnection link dependent on the propogration of Rossby Waves.

Integrative approach revises the frequently misidentified species of Sardinella (Clupeidae) of the Indo-West Pacific Ocean.

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Stern, N; Rinkevich, B; Goren, M

2016-11-01

To deal with the difficulties of species differentiation and delimitation among the commercially important sardines from the genus Sardinella, an integrative approach was adopted, incorporating traditional taxonomy with four DNA markers (coI, cytb, 16s and nuclear rag2). Combining these methodologies has enabled a thorough re-description of three of the most common species of Sardinella of the Indo-west Pacific Ocean: white sardinella Sardinella albella, fringescale sardinella Sardinella fimbriata and the goldstripe sardinella Sardinella gibbosa, as well as a description of a new species, Gon's sardinella Sardinella goni, from the island of Boracay, Philippines. In addition, extensive widespread sampling of S. gibbosa reveals a significant genetic separation between the populations from the western Indian Ocean and the west Pacific Ocean, despite no supporting morphological differentiation. An updated morphological key of the species of Sardinella of the Indo-west Pacific Ocean is also provided in order to minimize future misidentifications within these economically important taxa. Finally, the genetic and morphological variabilities within and between the investigated species are used to discuss their biogeographical distribution and possible processes of speciation. © 2016 The Fisheries Society of the British Isles.

Three new stingrays (Myliobatiformes: Dasyatidae) from the Indo-West Pacific.

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Last, Peter R; White, William T; Naylor, Gavin

2016-08-05

Three undescribed stingrays were discovered as part of a broader revision of the family Dasyatidae that formed part of the Chondrichthyan Tree of Life project. This research forms part of a sequence of papers on rays aimed at describing unnamed species for inclusion in a multi-authored guide to rays of the world. The first part of this series focused on a redefinition of genera of the family Dasyatidae. The new Indo-West Pacific taxa are represented by separate genera from three dasyatid subfamilies: Himantura australis sp. nov. (northern Australia and Papua New Guinea), Taeniura lessoni sp. nov. (Melanesia) and Telatrygon biasa sp. nov. (Indo-Malay Archipelago). Himantura australis sp. nov., which belongs to a complex of four closely related reticulate whiprays, differs subtly from its congeners in coloration, morphometrics and distribution. Taeniura lessoni sp. nov. is the second species in a genus containing the widely-distributed T. lymma, which is possibly the most abundant stingray in shallow coral-reef habitats of the Indo-Pacific, with the new species apparently restricted to Melanesia. Taeniura lessoni sp. nov. is distinguishable by the absence of a distinctive pair of vivid blue longitudinal stripes on the dorsolateral edges of the tail which is one of the most distinctive features of T. lymma. Telatrygon biasa sp. nov. belongs to a small, recently designated genus of stingrays represented by four species in the tropical Indo-West Pacific. Telatrygon biasa sp. nov. differs from these species in morphometrics. The new species differs markedly from T. zugei in its NADH2 sequence. Telatrygon crozieri is resurrected as a valid northern Indian Ocean representative of the T. zugei complex.

Molecular exploration of hidden diversity in the Indo-West Pacific sciaenid clade.

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Lo, Pei-Chun; Liu, Shu-Hui; Nor, Siti Azizah Mohd; Chen, Wei-Jen

2017-01-01

The family Sciaenidae, known as croakers or drums, is one of the largest perciform fish families. A recent multi-gene based study investigating the phylogeny and biogeography of global sciaenids revealed that the origin and early diversification of this family occurred in tropical America during the Late Oligocene-Early Miocene before undergoing range expansions to other seas including the Indo-West Pacific, where high species richness is observed. Despite this clarification of the overall evolutionary history of the family, knowledge of the taxonomy and phylogeny of sciaenid genera endemic to the Indo-West Pacific is still limited due to lack of a thorough survey of all taxa. In this study, we used DNA-based approaches to investigate the evolutionary relationships, to explore the species diversity, and to elucidate the taxonomic status of sciaenid species/genera within the Indo-West Pacific clade. Three datasets were herein built for the above objectives: the combined dataset (248 samples from 45 currently recognized species) from one nuclear gene (RAG1) and one mitochondrial gene (COI); the dataset with only RAG1 gene sequences (245 samples from 44 currently recognized species); and the dataset with only COI gene sequences (308 samples from 51 currently recognized species). The latter was primarily used for our biodiversity exploration with two different species delimitation methods (Automatic Barcode Gap Discovery, ABGD and Generalized Mixed Yule Coalescent, GMYC). The results were further evaluated with help of four supplementary criteria for species delimitation (genetic similarity, monophyly inferred from individual gene and combined data trees, geographic distribution, and morphology). Our final results confirmed the validity of 32 currently recognized species and identified several potential new species waiting for formal descriptions. We also reexamined the taxonomic status of the genera, Larimichthys, Nibea, Protonibea and Megalonibea, and suggested a

Molecular exploration of hidden diversity in the Indo-West Pacific sciaenid clade.

Directory of Open Access Journals (Sweden)

Pei-Chun Lo

Full Text Available The family Sciaenidae, known as croakers or drums, is one of the largest perciform fish families. A recent multi-gene based study investigating the phylogeny and biogeography of global sciaenids revealed that the origin and early diversification of this family occurred in tropical America during the Late Oligocene-Early Miocene before undergoing range expansions to other seas including the Indo-West Pacific, where high species richness is observed. Despite this clarification of the overall evolutionary history of the family, knowledge of the taxonomy and phylogeny of sciaenid genera endemic to the Indo-West Pacific is still limited due to lack of a thorough survey of all taxa. In this study, we used DNA-based approaches to investigate the evolutionary relationships, to explore the species diversity, and to elucidate the taxonomic status of sciaenid species/genera within the Indo-West Pacific clade. Three datasets were herein built for the above objectives: the combined dataset (248 samples from 45 currently recognized species from one nuclear gene (RAG1 and one mitochondrial gene (COI; the dataset with only RAG1 gene sequences (245 samples from 44 currently recognized species; and the dataset with only COI gene sequences (308 samples from 51 currently recognized species. The latter was primarily used for our biodiversity exploration with two different species delimitation methods (Automatic Barcode Gap Discovery, ABGD and Generalized Mixed Yule Coalescent, GMYC. The results were further evaluated with help of four supplementary criteria for species delimitation (genetic similarity, monophyly inferred from individual gene and combined data trees, geographic distribution, and morphology. Our final results confirmed the validity of 32 currently recognized species and identified several potential new species waiting for formal descriptions. We also reexamined the taxonomic status of the genera, Larimichthys, Nibea, Protonibea and Megalonibea, and

Composite and case study analyses of the large-scale environments associated with West Pacific Polar and subtropical vertical jet superposition events

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Handlos, Zachary J.

Though considerable research attention has been devoted to examination of the Northern Hemispheric polar and subtropical jet streams, relatively little has been directed toward understanding the circumstances that conspire to produce the relatively rare vertical superposition of these usually separate features. This dissertation investigates the structure and evolution of large-scale environments associated with jet superposition events in the northwest Pacific. An objective identification scheme, using NCEP/NCAR Reanalysis 1 data, is employed to identify all jet superpositions in the west Pacific (30-40°N, 135-175°E) for boreal winters (DJF) between 1979/80 - 2009/10. The analysis reveals that environments conducive to west Pacific jet superposition share several large-scale features usually associated with East Asian Winter Monsoon (EAWM) northerly cold surges, including the presence of an enhanced Hadley Cell-like circulation within the jet entrance region. It is further demonstrated that several EAWM indices are statistically significantly correlated with jet superposition frequency in the west Pacific. The life cycle of EAWM cold surges promotes interaction between tropical convection and internal jet dynamics. Low potential vorticity (PV), high theta e tropical boundary layer air, exhausted by anomalous convection in the west Pacific lower latitudes, is advected poleward towards the equatorward side of the jet in upper tropospheric isentropic layers resulting in anomalous anticyclonic wind shear that accelerates the jet. This, along with geostrophic cold air advection in the left jet entrance region that drives the polar tropopause downward through the jet core, promotes the development of the deep, vertical PV wall characteristic of superposed jets. West Pacific jet superpositions preferentially form within an environment favoring the aforementioned characteristics regardless of EAWM seasonal strength. Post-superposition, it is shown that the west Pacific

Strain characterization of West African Dwarf goats of Ogun State II ...

African Journals Online (AJOL)

The West African Dwarf (WAD) goat presents variable coat colours, ranging from black, brown, gray, red and white and sometimes combinations of these variety of patterns. In this study, strains of West African Dwarf (WAD) goat were characterized using linear body measurement. The WAD goat included the chocolate, white ...

CRED 1 meter resolution Reson 8101 multibeam backscatter data of Wake Island, West Central Pacific, 2007.

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Multibeam backscatter imagery extracted from gridded bathymetry of Wake Island, West Central Pacific.These data provide coverage between 0 and 200m meters. The...

Revealing the distinct habitat ranges and hybrid zone of genetic sub-populations within Pseudo-nitzschia pungens (Bacillariophyceae) in the West Pacific area.

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Kim, Jin Ho; Wang, Pengbin; Park, Bum Soo; Kim, Joo-Hwan; Patidar, Shailesh Kumar; Han, Myung-Soo

2018-03-01

Genetic sub-populations (clades) of cosmopolitan marine diatom Pseudo-nitzschia pungens might have distinct habitats, and their hybrid zone is suspected in higher latitude area of the West Pacific area, however, it is still unrevealed because of technical difficulties and lack of evidences in natural environments. The aim of this study is to investigate the habitat characteristics of each clade of P. pungens on geographical distribution with the habitat temperature ranges of each clade and to reveal their hybrid zone in the West Pacific area. We employed the 137 number of nucleotide sequences of P. pungens and its sampling data (spatial and temporal scale) originated from the West Pacific area, and used field application of qPCR assay for intra-specific level of P. pungens. Only two genotypes, clade I and III, were identified in the West Pacific area. Clade I was distributed from 39 to 32.3°N, and clade III were from 1.4 to 34.4°N. The estimated habitat temperature for the clade I and clade III ranges were 8.1-26.9 °C and 24.2-31.2 °C, respectively. The latitudinal distributions and temperature ranges of each clade were significantly different. The qPCR assay employed, and results suggested that the hybrid zone for clade I and III has been observed in the southern Korean coasts, and clade III might be introduced from the Southern Pacific area. The cell abundances of clade III were strongly related with the higher seawater temperature and warm current force. This study has defined distinct habitat characteristics of genetically different sub-populations of P. pungens, and revealed its hybrid zone in natural environment for the first time. We also provided strong evidences about dispersion of the population of clade III to higher latitude in the West Pacific area. Copyright © 2018. Published by Elsevier B.V.

Genetic Population Structure of the Coral Reef Sea Star Linckia laevigata in the Western Indian Ocean and Indo-West Pacific.

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Otwoma, Levy Michael; Kochzius, Marc

2016-01-01

The coral reef sea star Linckia laevigata is common on shallow water coral reefs of the Indo-West Pacific. Its large geographic distribution and comprehensive data from previous studies makes it suitable to examine genetic differentiation and connectivity over large geographical scales. Based on partial sequences of the mitochondrial cytochrome oxidase I (COI) gene this study investigates the genetic population structure and connectivity of L. laevigata in the Western Indian Ocean (WIO) and compares it to previous studies in the Indo-Malay-Philippines Archipelago (IMPA). A total of 138 samples were collected from nine locations in the WIO. AMOVA revealed a low but significant ΦST-value of 0.024 for the WIO populations. In the hierarchical AMOVA, the following grouping rejected the hypothesis of panmixia: (1) Kenya (Watamu, Mombasa, Diani) and Tanzanian Island populations (Misali and Jambiani) and (2) the rest of the WIO sites (mainland Tanzania and Madagascar; ΦCT = 0.03). The genetic population structure was stronger and more significant (ΦST = 0.13) in the comparative analysis of WIO and IMPA populations. Three clades were identified in the haplotype network. The strong genetic differentiation (ΦCT = 0.199, P Indo-West Pacific populations of L. laevigata can be grouped into four biogeographic regions: (1) WIO (2) Eastern Indian Ocean (3) IMPA and (4) Western Pacific. The findings of this study support the existence of a genetic break in the Indo-West Pacific consistent with the effect of lowered sea level during the Pleistocene, which limited gene flow between the Pacific and Indian Ocean.

Anomalous South Pacific lithosphere dynamics derived from new total sediment thickness estimates off the West Antarctic margin

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Wobbe, Florian; Lindeque, Ansa; Gohl, Karsten

2014-12-01

Paleotopographic models of the West Antarctic margin, which are essential for robust simulations of paleoclimate scenarios, lack information on sediment thickness and geodynamic conditions, resulting in large uncertainties. A new total sediment thickness grid spanning the Ross Sea-Amundsen Sea-Bellingshausen Sea basins is presented and is based on all the available seismic reflection, borehole, and gravity modeling data offshore West Antarctica. This grid was combined with NGDC's global 5 arc minute grid of ocean sediment thickness (Whittaker et al., 2013) and extends the NGDC grid further to the south. Sediment thickness along the West Antarctic margin tends to be 3-4 km larger than previously assumed. The sediment volume in the Bellingshausen, Amundsen, and Ross Sea basins amounts to 3.61, 3.58, and 2.78 million km3, respectively. The residual basement topography of the South Pacific has been revised and the new data show an asymmetric trend over the Pacific-Antarctic Ridge. Values are anomalously high south of the spreading ridge and in the Ross Sea area, where the topography seems to be affected by persistent mantle processes. In contrast, the basement topography offshore Marie Byrd Land cannot be attributed to dynamic topography, but rather to crustal thickening due to intraplate volcanism. Present-day dynamic topography models disagree with the presented revised basement topography of the South Pacific, rendering paleotopographic reconstructions with such a limited dataset still fairly uncertain.

A Geodetic Strain Rate Model for the Pacific-North American Plate Boundary, western United States

Science.gov (United States)

Kreemer, C.; Hammond, W. C.; Blewitt, G.; Holland, A. A.; Bennett, R. A.

2012-04-01

We present a model of crustal strain rates derived from GPS measurements of horizontal station velocities in the Pacific-North American plate boundary in the western United States. The model reflects a best estimate of present-day deformation from the San Andreas fault system in the west to the Basin and Range province in the east. Of the total 2,846 GPS velocities used in the model, 1,197 are derived by ourselves, and 1,649 are taken from (mostly) published results. The velocities derived by ourselves (the "UNR solution") are estimated from GPS position time-series of continuous and semi-continuous stations for which data are publicly available. We estimated ITRF2005 positions from 2002-2011.5 using JPL's GIPSY-OASIS II software with ambiguity resolution applied using our custom Ambizap software. Only stations with time-series that span at least 2.25 years are considered. We removed from the time-series continental-scale common-mode errors using a spatially-varying filtering technique. Velocity uncertainties (typically 0.1-0.3 mm/yr) assume that the time-series contain flicker plus white noise. We used a subset of stations on the stable parts of the Pacific and North American plates to estimate the Pacific-North American pole of rotation. This pole is applied as a boundary condition to the model and the North American - ITRF2005 pole is used to rotate our velocities into a North America fixed reference frame. We do not include parts of the time-series that show curvature due to post-seismic deformation after major earthquakes and we also exclude stations whose time-series display a significant unexplained non-linearity or that are near volcanic centers. Transient effects longer than the observation period (i.e., slow viscoelastic relaxation) are left in the data. We added to the UNR solution velocities from 12 other studies. The velocities are transformed onto the UNR solution's reference frame by estimating and applying a translation and rotation that minimizes

Geographic variation in the damselfish-red alga cultivation mutualism in the Indo-West Pacific

Science.gov (United States)

2010-01-01

Background On coral reefs, damselfish defend their territories from invading herbivores and maintain algal turfs, from which they harvest filamentous algae. In southern Japan, intensive weeding of indigestible algae by Stegastes nigricans results in overgrowth by one filamentous alga, Polysiphonia sp. 1. Because this alga is highly susceptible to grazing and is competitively inferior to other algae, it survives only within the protective territories of this fish species, suggesting an obligate mutualism between damselfish and their cultivated alga. The wide distribution of damselfish species through the Indo-Central Pacific raises the question of whether this species-specific mutualism is maintained throughout the geographic range of the fish. To address this question, from all 18 damselfish species we conducted comprehensive surveys of algal flora within their territories throughout the Indo-West Pacific, and identified species of Polysiphonia using morphological examination and gene sequencing data. Results Several species of the genus Polysiphonia were observed as a major crop in territories throughout the geographic range of S. nigricans. Polysiphonia sp. 1 occurred only in territories of S. nigricans in central areas of the Indo-Pacific. However, its occurrence was low from the Great Barrier Reef and Mauritius. In contrast, other indigenous Polysiphonia species, which formed a clade with Polysiphonia sp. 1, occurred in the territories of fishes from Egypt, Kenya, and the Maldives. The other Polysiphonia species in the clade only inhabited damselfish territories and were never found elsewhere. Conclusions Cultivation mutualism between the damselfish S. nigricans and algae of Polysiphonia was maintained throughout the Indo-West Pacific, although algal crop species and the mode of cultivation (e.g., presence/absence of selective weeding, the species composition of algal turfs) varied among localities. This finding implies that damselfish utilize indigenous

Geographic variation in the damselfish-red alga cultivation mutualism in the Indo-West Pacific

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Watanabe Katsutoshi

2010-06-01

Full Text Available Abstract Background On coral reefs, damselfish defend their territories from invading herbivores and maintain algal turfs, from which they harvest filamentous algae. In southern Japan, intensive weeding of indigestible algae by Stegastes nigricans results in overgrowth by one filamentous alga, Polysiphonia sp. 1. Because this alga is highly susceptible to grazing and is competitively inferior to other algae, it survives only within the protective territories of this fish species, suggesting an obligate mutualism between damselfish and their cultivated alga. The wide distribution of damselfish species through the Indo-Central Pacific raises the question of whether this species-specific mutualism is maintained throughout the geographic range of the fish. To address this question, from all 18 damselfish species we conducted comprehensive surveys of algal flora within their territories throughout the Indo-West Pacific, and identified species of Polysiphonia using morphological examination and gene sequencing data. Results Several species of the genus Polysiphonia were observed as a major crop in territories throughout the geographic range of S. nigricans. Polysiphonia sp. 1 occurred only in territories of S. nigricans in central areas of the Indo-Pacific. However, its occurrence was low from the Great Barrier Reef and Mauritius. In contrast, other indigenous Polysiphonia species, which formed a clade with Polysiphonia sp. 1, occurred in the territories of fishes from Egypt, Kenya, and the Maldives. The other Polysiphonia species in the clade only inhabited damselfish territories and were never found elsewhere. Conclusions Cultivation mutualism between the damselfish S. nigricans and algae of Polysiphonia was maintained throughout the Indo-West Pacific, although algal crop species and the mode of cultivation (e.g., presence/absence of selective weeding, the species composition of algal turfs varied among localities. This finding implies that

Trade in value added in the West Pacific: An input-output analysis

OpenAIRE

Nakamura, Yoichi

2015-01-01

The evolution of trade between the four regions in the West Pacific in both gross and value added terms is analyzed using international input-output tables. It is found that value added exports of computers and electronic equipment of the Asian economies are very limited in comparison with their gross exports, and that the largest shares of value added exports were accounted for by the services sectors in every region, particularly so in Japan and the US. Surpluses and deficits in bilateral t...

Genetic Population Structure of the Coral Reef Sea Star Linckia laevigata in the Western Indian Ocean and Indo-West Pacific.

Directory of Open Access Journals (Sweden)

Levy Michael Otwoma

Full Text Available The coral reef sea star Linckia laevigata is common on shallow water coral reefs of the Indo-West Pacific. Its large geographic distribution and comprehensive data from previous studies makes it suitable to examine genetic differentiation and connectivity over large geographical scales. Based on partial sequences of the mitochondrial cytochrome oxidase I (COI gene this study investigates the genetic population structure and connectivity of L. laevigata in the Western Indian Ocean (WIO and compares it to previous studies in the Indo-Malay-Philippines Archipelago (IMPA. A total of 138 samples were collected from nine locations in the WIO. AMOVA revealed a low but significant ΦST-value of 0.024 for the WIO populations. In the hierarchical AMOVA, the following grouping rejected the hypothesis of panmixia: (1 Kenya (Watamu, Mombasa, Diani and Tanzanian Island populations (Misali and Jambiani and (2 the rest of the WIO sites (mainland Tanzania and Madagascar; ΦCT = 0.03. The genetic population structure was stronger and more significant (ΦST = 0.13 in the comparative analysis of WIO and IMPA populations. Three clades were identified in the haplotype network. The strong genetic differentiation (ΦCT = 0.199, P < 0.001 suggests that Indo-West Pacific populations of L. laevigata can be grouped into four biogeographic regions: (1 WIO (2 Eastern Indian Ocean (3 IMPA and (4 Western Pacific. The findings of this study support the existence of a genetic break in the Indo-West Pacific consistent with the effect of lowered sea level during the Pleistocene, which limited gene flow between the Pacific and Indian Ocean.

Strain Variation along Cimandiri Fault, West Java Based on Continuous and Campaign GPS Observation From 2006-2016

Science.gov (United States)

Safitri, A. A.; Meilano, I.; Gunawan, E.; Abidin, H. Z.; Efendi, J.; Kriswati, E.

2018-03-01

The Cimandiri fault which is running in the direction from Pelabuhan Ratu to Padalarang is the longest fault in West Java with several previous shallow earthquakes in the last 20 years. By using continues and campaign GPS observation from 2006-2016, we obtain the deformation pattern along the fault through the variation of strain tensor. We use the velocity vector of GPS station which is fixed in stable International Terrestrial Reference Frame 2008 to calculate horizontal strain tensor. Least Square Collocation is applied to produce widely dense distributed velocity vector and optimum scale factor for the Least Square Weighting matrix. We find that the strain tensor tend to change from dominantly contraction in the west to dominantly extension to the east of fault. Both the maximum shear strain and dilatation show positive value along the fault and increasing from the west to the east. The findings of strain tensor variation along Cimandiri Fault indicate the post seismic effect of the 2006 Java Earthquake.

Moisture dynamics of the northward and eastward propagating boreal summer intraseasonal oscillations: possible role of tropical Indo-west Pacific SST and circulation

Science.gov (United States)

Pillai, Prasanth A.; Sahai, A. K.

2016-08-01

Boreal summer intraseasonal oscillation (BSISO) has complex spatial structure due to the co-existence of equatorial eastward and off-equatorial northward propagation in the equatorial Indian Ocean. As a result, equatorial Indian Ocean convection has simultaneous northward and eastward (NE), northward only (N-only) and eastward only (E-only) propagations. It is well established that the convection propagates in the direction of increasing moist static energy (MSE). The moisture and MSE budget analysis reveals that the horizontal advection of anomalous MSE contributes to positive MSE tendency, which is in agreement with the horizontal advection of column integrated moisture anomaly. Northward movement of warm SST and the anomalous moisture advected by zonal wind are the major initiative for the northward propagation of convection from the equatorial Indian Ocean in both NE and N-only category. At the same time warm SST anomaly in the equatorial west Pacific along with moisture advection caused by anomalous meridional wind is important for the equatorial eastward branch of NE propagation. As these anomalies in the west Pacific moves northward, equatorial Indian Ocean convection establishes over the equatorial west Pacific. The absence of these processes confines the BSISO in northward direction for N-only category. In the case of E-only movement, warm SST anomaly and moisture advection by zonal component of wind causes the eastward propagation of convection. Boundary layer moisture convergence always remains east of convection center in E-only propagation, while it coincides with convection centre in other two categories. Thus the present study concludes that the difference in underlying SST and atmospheric circulation in tropical Indo-west Pacific oceanic regions encourage the differential propagation of BSISO convection through moisture dynamics.

Global species delimitation and phylogeography of the circumtropical ‘sexy shrimp’ Thor amboinensis reveals a cryptic species complex and secondary contact in the Indo-West Pacific

KAUST Repository

Titus, Benjamin M.

2018-04-27

Aim The “sexy shrimp” Thor amboinensis is currently considered a single circumtropical species. However, the tropical oceans are partitioned by hard and soft barriers to dispersal, providing ample opportunity for allopatric speciation. Herein, we test the null hypothesis that T. amboinensis is a single global species, reconstruct its global biogeographical history, and comment on population‐level patterns throughout the Tropical Western Atlantic. Location Coral reefs in all tropical oceans. Methods Specimens of Thor amboinensis were obtained through field collection and museum holdings. We used one mitochondrial (COI) and two nuclear (NaK, enolase) gene fragments for global species delimitation and phylogenetic analyses (n = 83 individuals, 30 sample localities), while phylogeographical reconstruction in the TWA was based on COI only (n = 303 individuals, 10 sample localities). Results We found evidence for at least five cryptic lineages (9%–22% COI pairwise sequence divergence): four in the Indo‐West Pacific and one in the Tropical Western Atlantic. Phylogenetic reconstruction revealed that endemic lineages from Japan and the South Central Pacific are more closely related to the Tropical Western Atlantic lineage than to a co‐occurring lineage that is widespread throughout the Indo‐West Pacific. Concatenated and species tree phylogenetic analyses differ in the placement of an endemic Red Sea lineage and suggest alternate dispersal pathways into the Atlantic. Phylogeographical reconstruction throughout the Tropical Western Atlantic reveals little genetic structure over more than 3,000 km. Main conclusions Thor amboinensis is a species complex that has undergone a series of allopatric speciation events and whose members are in secondary contact in the Indo‐West Pacific. Nuclear‐ and mitochondrial‐ gene phylogenies show evidence of introgression between lineages inferred to have been separated more than 20 Ma. Phylogenetic discordance between

Basic survey for Joint Implementation on West Pacific Petrochemical Co., Ltd., Dalian, China. Energy conservation project for West Pacific Oil Refinery

Energy Technology Data Exchange (ETDEWEB)

NONE

2000-03-01

For the purpose of reducing greenhouse effect gas emissions, a potential survey was conducted of energy conservation at West Pacific Oil Refinery, Dalian, China. In the survey, studies were made of energy conservation by introducing the hydrogen recovery equipment and the gas turbine generation system using exhaust gas as fuel, and of potentiality of reducing greenhouse effect gas emissions. As a result of the survey, a gas turbine generator of about 29MW using the surplus gas as fuel can be installed. By this, approximately 71% of the power used in refinery is to be supplied as against 25% of the power presently used. The technology was proposed on the hydrogen recovery equipment and the gas turbine generation system to discuss the revision plan with the Chinese partner. When this project is realized, the reduction amount of CO2 will be 136,000 ton/y. The Chinese side highly estimated not only the remarkable reduction in CO2, but the reduction in purchased power from outside which is to be brought by realization of this project. (NEDO)

Strain characterization of West African Dwarf Goats of Ogun State I ...

African Journals Online (AJOL)

Characterization of West African Dwarf goat is an approach to a sustainable use of its great potentials. In this study, strains of WAD goat were characterized using linear body measurement. The WAD goat included the gold (brown), black, buckskin and chaimose of ages 1, 2, 3 and 4 years,raised under extensive system of ...

Paleocene Pacific Plate reorganization mirrored in formation of the Suvarov Trough, Manihiki Plateau

Science.gov (United States)

Pietsch, Ricarda; Uenzelmann-Neben, Gabriele

2016-10-01

The Suvarov Trough is a graben structure that deviates from the Danger Islands Troughs within the Manihiki Plateau, a Large Igneous Province (LIP) located in the Central Pacific. New high-resolution seismic reflection data provide evidence that the graben formed in two phases during the Paleocene (65-45 Ma). In a first phase extension occurred in southwestward direction, pulling apart the northern part of the Suvarov Trough and a parallel trending unnamed trough. In a second phase a change of extensional force direction occurred from southwest to west-northwest, forming the southern part of the Suvarov Trough that extends onto the High Plateau. The formation of the Suvarov Trough is accompanied by a series of normal fault systems that apparently formed simultaneously. Comparing the seismic results to existing Pacific paleo strain reconstructions, the timing of increased strain and local deformation direction fits well to our findings. We thus suggest that the multiple strike directions of the Suvarov Trough represent an extensional structure that was caused by the major, stepwise Pacific Plate reorganization during the Paleocene.

A Triassic to Cretaceous Sundaland-Pacific subduction margin in West Sarawak, Borneo

Science.gov (United States)

Breitfeld, H. Tim; Hall, Robert; Galin, Thomson; Forster, Margaret A.; BouDagher-Fadel, Marcelle K.

2017-01-01

Metamorphic rocks in West Sarawak are poorly exposed and studied. They were previously assumed to be pre-Carboniferous basement but had never been dated. New 40Ar/39Ar ages from white mica in quartz-mica schists reveal metamorphism between c. 216 to 220 Ma. The metamorphic rocks are associated with Triassic acid and basic igneous rocks, which indicate widespread magmatism. New U-Pb dating of zircons from the Jagoi Granodiorite indicates Triassic magmatism at c. 208 Ma and c. 240 Ma. U-Pb dating of zircons from volcaniclastic sediments of the Sadong and Kuching Formations confirms contemporaneous volcanism. The magmatic activity is interpreted to represent a Triassic subduction margin in westernmost West Sarawak with sediments deposited in a forearc basin derived from the magmatic arc at the Sundaland-Pacific margin. West Sarawak and NW Kalimantan are underlain by continental crust that was already part of Sundaland or accreted to Sundaland in the Triassic. One metabasite sample, also previously assumed to be pre-Carboniferous basement, yielded Early Cretaceous 40Ar/39Ar ages. They are interpreted to indicate resumption of subduction which led to deposition of volcaniclastic sediments and widespread magmatism. U-Pb ages from detrital zircons in the Cretaceous Pedawan Formation are similar to those from the Schwaner granites of NW Kalimantan, and the Pedawan Formation is interpreted as part of a Cretaceous forearc basin containing material eroded from a magmatic arc that extended from Vietnam to west Borneo. The youngest U-Pb ages from zircons in a tuff layer from the uppermost part of the Pedawan Formation indicate that volcanic activity continued until c. 86 to 88 Ma when subduction terminated.

Re-Evaluation of Phylogenetic Relationships among Species of the Mangrove Genus Avicennia from Indo-West Pacific Based on Multilocus Analyses.

Science.gov (United States)

Li, Xinnian; Duke, Norman C; Yang, Yuchen; Huang, Lishi; Zhu, Yuxiang; Zhang, Zhang; Zhou, Renchao; Zhong, Cairong; Huang, Yelin; Shi, Suhua

2016-01-01

Avicennia L. (Avicenniaceae), one of the most diverse mangrove genera, is distributed widely in tropical and subtropical intertidal zones worldwide. Five species of Avicennia in the Indo-West Pacific region have been previously described. However, their phylogenetic relationships were determined based on morphological and allozyme data. To enhance our understanding of evolutionary patterns in the clade, we carried out a molecular phylogenetic study using wide sampling and multiple loci. Our results support two monophyletic clades across all species worldwide in Avicennia: an Atlantic-East Pacific (AEP) lineage and an Indo-West Pacific (IWP) lineage. This split is in line with biogeographic distribution of the clade. Focusing on the IWP branch, we reconstructed a detailed phylogenetic tree based on sequences from 25 nuclear genes. The results identified three distinct subclades, (1) A. rumphiana and A. alba, (2) A. officinalis and A. integra, and (3) the A. marina complex, with high bootstrap support. The results strongly corresponded to two morphological traits in floral structure: stigma position in relation to the anthers and style length. Using Bayesian dating methods we estimated diversification of the IWP lineage was dated to late Miocene (c. 6.0 million years ago) and may have been driven largely by the fluctuating sea levels since that time.

Re-Evaluation of Phylogenetic Relationships among Species of the Mangrove Genus Avicennia from Indo-West Pacific Based on Multilocus Analyses.

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Xinnian Li

Full Text Available Avicennia L. (Avicenniaceae, one of the most diverse mangrove genera, is distributed widely in tropical and subtropical intertidal zones worldwide. Five species of Avicennia in the Indo-West Pacific region have been previously described. However, their phylogenetic relationships were determined based on morphological and allozyme data. To enhance our understanding of evolutionary patterns in the clade, we carried out a molecular phylogenetic study using wide sampling and multiple loci. Our results support two monophyletic clades across all species worldwide in Avicennia: an Atlantic-East Pacific (AEP lineage and an Indo-West Pacific (IWP lineage. This split is in line with biogeographic distribution of the clade. Focusing on the IWP branch, we reconstructed a detailed phylogenetic tree based on sequences from 25 nuclear genes. The results identified three distinct subclades, (1 A. rumphiana and A. alba, (2 A. officinalis and A. integra, and (3 the A. marina complex, with high bootstrap support. The results strongly corresponded to two morphological traits in floral structure: stigma position in relation to the anthers and style length. Using Bayesian dating methods we estimated diversification of the IWP lineage was dated to late Miocene (c. 6.0 million years ago and may have been driven largely by the fluctuating sea levels since that time.

Mitogenomic evidence for an Indo-West Pacific origin of the Clupeoidei (Teleostei: Clupeiformes.

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Sébastien Lavoué

Full Text Available The clupeoid fishes are distributed worldwide, with marine, freshwater and euryhaline species living in either tropical or temperate environments. Regional endemism is important at the species and genus levels, and the highest species diversity is found in the tropical marine Indo-West Pacific region. The clupeoid distribution follows two general pattern of species richness, the longitudinal and latitudinal gradients. To test historical hypotheses explaining the formation of these two gradients, we have examined the early biogeography of the Clupeoidei in reconstructing the evolution of their habitat preferences along with their ancestral range distributions on a time-calibrated mitogenomic phylogeny. The phylogenetic results support the distinction of nine main lineages within the Clupeoidei, five of them new. We infer several independent transitions from a marine to freshwater environment and from a tropical to temperate environment that occurred after the initial diversification period of the Clupeoidei. These results combined with our ancestral range reconstruction hypothesis suggest that the probable region of origin and diversification of the Clupeoidei during the Cretaceous period was the tropical marine precursor to the present Indo-West Pacific region. Thus, our study favors the hypotheses of "Region of origin" and "Tropical conservatism" to explain the origins of the longitudinal and latitudinal gradients of clupeoid species richness, respectively. Additional geological and paleontological evidence further define the tropical marine paleo-region of origin as the eastern Tethys Sea region. The Cretaceous fossil record of the Clupeoidei is partially incongruent with the results here as it contains taxa found outside this region. We discuss three possible causes of conflict between our biogeographical hypothesis and the distributions of the Cretaceous clupeoid fossils: regional extinction, incomplete taxonomic sampling and incorrect

Contrasting rainfall declines in northern and southern Tanzania: Potential differential impacts of west Pacific warming and east Pacific cooling

Science.gov (United States)

Harrison, L.; Funk, C. C.; Verdin, J. P.; Pedreros, D. H.; Shukla, S.; Husak, G. J.

2015-12-01

Here, we present analysis of a new 1900-2014 rainfall record for the Greater Horn of Africa with high station density (CenTrends), and evaluate potential climate change "hot spots" in Tanzania. We identify recent (1981-2014) downward trends in Tanzanian rainfall, use CenTrends to place these in a longer historical context, and relate rainfall in these regions to decadal changes in global sea surface temperatures (SSTs). To identify areas of concern, we consider the potential food security impacts of the recent rainfall declines and also rapid population growth. Looking forward, we consider what the links to SSTs might mean for rainfall in the next several decades based on SST projections. In addition to CenTrends, we use a variety of geographic data sets, including 1981-2014 rainfall from the Climate Hazards group InfraRed Precipitation with Stations (CHIRPSv2.0), simulated crop stress from the USGS Geospatial Water Requirement Satisfaction Index (GeoWRSI) model, NOAA Extended Reconstructed SSTs (ERSST v4), SST projections from the Coupled Model Intercomparison Project (CMIP5), and land cover and population maps from SERVIR, WorldPOP, and CIESIN's Gridded Population of the World. The long-term CenTrends record allows us to suggest an interesting dichotomy in decadal rainfall forcing. During the March to June season, SSTs in the west Pacific appear to be driving post-1980 rainfall reductions in northern Tanzania. In the 2000s, northern Tanzania's densely populated Pangani River, Internal Drainage, and Lake Victoria basins experienced the driest period in more than a century. During summer, negative trends in southern Tanzania appear linked to a negative SST trend in the Nino3.4 region. Since the SST trend in the west (east) Pacific appears strongly influenced by global warming (natural decadal variability), we suggest that water resources in northern Tanzania may face increasing challenges, but that this will be less the case in southern Tanzania.

Monorchiids (Platyhelminthes: Digenea) of chaetodontid fishes (Perciformes): biogeographical patterns in the tropical Indo-West Pacific.

Science.gov (United States)

McNamara, M K A; Adlard, R D; Bray, R A; Sasal, P; Cribb, T H

2012-06-01

Species richness and biogeography of the monorchiid genus Hurleytrematoides was studied by the examination of 2834 individuals of 45 species of Chaetodontidae at six major sites in the tropical Indo-West Pacific: Heron Island, Lizard Island, Ningaloo (Western Australia), Palau, New Caledonia and Moorea (French Polynesia). In total, 18 species were distributed among six sites; descriptions are provided for eight new species: H. boucheti n. sp., H. combesi n. sp., H. deblocki n. sp., H. dollfusi n. sp., H. euzeti n. sp., H. kulbickii n. sp., H. pasteuri n. sp., and H. planesi n. sp. Overall richness ranged from zero to five Hurleytrematoides species per chaetodontid species. Seven Hurleytrematoides species were found at only one locality and eleven were found at multiple localities. Only one species, H. morandi, was found at all localities. Individual localities had between six (Moorea) and 10 (Heron Island) species; we attribute Moorea's depauperate parasite fauna to its isolation and distance from the Indo-Philippine centre of biological diversity. Using cluster analysis of 18 species of Hurleytrematoides and 45 species of chaetodontids sampled in the Indo-West Pacific, we show that the localities on the Great Barrier Reef (Heron Island and Lizard Island) and New Caledonia have the most similar chaetodontid and parasite fauna of any locality pairs. Cluster analysis results also show that the similarity of the chaetodontid assemblages at five of the six localities is relatively high and that Ningaloo has the most distinct fauna. Similarity values based on sharing of species of Hurleytrematoides are generally lower than those for their hosts; Moorea, Ningaloo and Palau all have low similarity to New Caledonia and Great Barrier Reef sites. We attribute these distinctions to the differential dispersal capability of the fish and their parasites. Chaetodontids have long-lived mobile pelagic larvae, the dispersal of which would be most affected by prominent

Occupational Stress and Strain of Support Staff at a Higher Education Institution in the North West Province

Science.gov (United States)

Mahomed, F. E.; Naude, J. L. P.

2006-01-01

The aim of this study was to determine the occupational stressors and strains for support staff at a higher education institution in the North West Province, and to assess the differences between the stressors and strains of different biographical groups. A cross-sectional survey design (N = 315) was used. The ASSET and a biographical…

Did biogeographical processes shape the monogenean community of butterflyfishes in the tropical Indo-west Pacific region?

Science.gov (United States)

Reverter, M; Cribb, T H; Cutmore, S C; Bray, R A; Parravicini, V; Sasal, P

2017-07-01

Geographical distribution of parasite species can provide insights into the evolution and diversity of parasitic communities. Biogeography of marine parasites is poorly known, especially because it requires an understanding of host-parasite interactions, information that is rare, especially over large spatial scales. Here, we have studied the biogeographical patterns of dactylogyrid parasites of chaetodontids, one of the most well-studied fish families, in the tropical Indo-west Pacific region. Dactylogyrid parasites were collected from gills of 34 butterflyfish species (n=560) at nine localities within an approximate area of 62millionkm 2 . Thirteen dactylogyrid species were identified, with richness ranging from 6 to 12 species at individual localities. Most dactylogyrid communities were dominated by Haliotrema angelopterum or Haliotrema aurigae, for which relative abundance was negatively correlated (ρ=-0.59). Parasite richness and diversity were highest in French Polynesia and the Great Barrier Reef (Australia) and lowest in Palau. Three biogeographic regions were identified based on dactylogyrid dissimilarities: French Polynesia, characterised by the dominance of H. angelopterum, the western Pacific region dominated by H. aurigae, and Ningaloo Reef (Australia), dominated by Euryhaliotrema berenguelae. Structure of host assemblages was the main factor explaining the dissimilarity (turnover and nestedness components of the Bray-Curtis dissimilarity and overall Bray-Curtis dissimilarity) of parasite communities between localities, while environment was only significant in the turnover of parasite communities and overall dissimilarity. Spatial structure of localities explained only 10% of the turnover of parasite communities. The interaction of the three factors (host assemblages, environment and spatial structure), however, explained the highest amounts of variance of the dactylogyrid communities, indicating a strong colinearity between the factors. Our findings

ENSO and interdecadal climate variability over the last century documented by geochemical records of two coral cores from the South West Pacific

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T. Ourbak

2006-01-01

Full Text Available The south west Pacific is affected by climatic phenomena such as ENSO (El Niño Southern Oscillation or the PDO (Pacific Decadal Oscillation. Near-monthly resolution calibrations of Sr/Ca, U/Ca and δ18Oc were made on corals taken from New Caledonia and Wallis Island. These geochemical variations could be linked to SST (sea surface temperature and SSS (sea surface salinity variations over the last two decades, itselves dependent on ENSO occurrences. On the other hand, near-half-yearly resolution over the last century smoothes seasonal and interannual climate signals, but emphasizes low frequency climate variability.

Photophore counts in the deep-sea commercial shrimp Aristeus alcocki Ramadan, 1938 (Crustacea: Decapoda: Aristeidae), with a revised key to the Indo-West Pacific species of the genus.

Science.gov (United States)

Chan, Tin-Yam; Kumar, Appukuttannair Biju; Yang, Chien-Hui

2017-10-06

The availability of abundant fresh material of Aristeus alcocki Ramadan, 1938 from India allowed the evaluation of the variation in the numbers of photophores on the pereiopods in this species, as well as other diagnostic characters for species discrimination. Although the pereiopodal photophore counts in A. alcocki largely overlap with those of A. semidentatus Bate, 1888, it is found that A. alcocki is unique in the Indo-West Pacific species of the genus by the lower end of the cervical carina considerably farther away from the branchiostegal carina. Molecular genetic analysis confirmed the distinct taxonomic status of the six currently known species in this genus from the Indo-West Pacific and a revised key is provided for distinguishing them.

Indo-Pacific echinoids in the tropical eastern Pacific

Science.gov (United States)

Lessios, H. A.; Kessing, B. D.; Wellington, G. M.; Graybeal, A.

1996-06-01

The existing literature reports that only one species of Indo-Pacific echinoid ( Echinometra oblonga), occurs in the eastern Pacific. In this study we confirm the presence of this species at Islas Revillagigedo and also report the presence of two species of Echinothrix (a genus hitherto unknown outside the Indo-Pacific) at Isla del Coco and at Clipperton Island. We also present evidence from isozymes and from mitochondrial DNA sequences indicating that at least one individual of Diadema at Clipperton may belong to a maternal lineage characteristic of the west Pacific species D. savignyi. These data are consistent with the hypothesis that the observed populations of Indo-Pacific echinoid species are recent arrivals to the eastern Pacific, as opposed to the view that they are relicts of Tethyan pan-tropical distributions. Echinothrix diadema, in particular, may have arrived at Isla del Coco during the 1982-1983 El Nifio. In addition to Indo-Pacific species, Clipperton, Isla del Coco and the Revillagigedos contain a complement of eastern Pacific echinoids. The echinoid faunas of these islands should, therefore, be regarded as mixtures of two biogeographic provinces. Though none of the Indo-Pacific species are known to have reached the coast of the American mainland, their presence at the offshore islands of the eastern Pacific suggests that, for some echinoids, the East Pacific Barrier is not as formidable an obstacle to migration as was previously thought.

Taxonomic status of maskrays of the Neotrygon kuhlii species complex (Myliobatoidei: Dasyatidae) with the description of three new species from the Indo-West Pacific.

Science.gov (United States)

Last, Peter R; White, William T; Séret, Bernard

2016-02-23

The bluespotted maskray, Neotrygon kuhlii (Müller & Henle, 1841), once thought to be widely distributed in the Indo-West Pacific, consists of a complex of several species and the type series consists of multiple species; its nomenclature is discussed. A lectotype and paralectotype are designated and the species rediagnosed based on the types and a fresh specimen from Honiara (Solomon Islands), near to the collection locality of the lectotype (Vanikoro, Solomon Islands). Molecular and morphological data provide confirmatory evidence that this maskray is distinct from some other regional forms. Three members of the complex from the Western Pacific identified in earlier studies are confirmed to be new species; Neotrygon australiae sp. nov. (Australia, New Guinea and eastern Indonesia), N. caeruleopunctata sp. nov. (Indian Ocean), and N. orientale sp. nov. (North-West Pacific). These species differ from each other and N. kuhlii in their adult size, anterior angle of the disc, number and distribution of blue spots on the dorsal disc, and other more subtle morphometric and meristic characters. Another largely plain-coloured Neotrygon, also currently misidentified as N. kuhlii, is sympatric with N. orientale sp. nov. in the South China Sea and off Taiwan. Neotrygon varidens (Garman) is resurrected as the valid name for this ray. A key is provided to species of the genus.

Distribution, Condition and Gonad Maturity of the Invasive Pacific Oysters (Crassostrea Gigas, Thunberg 1793 in Cimanuk Delta, Indramayu, West Java, Indonesia

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Selia Hermawati

2017-11-01

Full Text Available Pacific oyster (Crassostrea gigas is an invasive species which is able to adapt a wide range of environmental conditions. The study was conducted from August to October 2014. Objective of this study was to asses the distribution pattern, condition and gonad maturity length (Lm 50% of the Pacific oysters in mangrove ecosystem of Cimanuk Delta, Indramayu, West Java, Indonesia.  This study was conducted in two adjacent areas:  Pabean Ilir and Pagirikan subdeltas. The oysters were collected from the estuary, brackish water ponds and the coastal flat, and  observed for their abundance, total length (mm and weight (g. Morphological and histological methods were used to estimate the gonad maturity stage. Analysis were carried out to estimate distribution pattern and condition factor. According to the study, the Pacific oyster distribution pattern was clumped. The condition factor of the oyster was higher in the brackish water pond and estuary than in the coastal flat.  The Pacific oyster was found in gonad maturity stage (GMS I – IV. The oyster was hermaprodit protandry and had length maturity (Lm 50% of 47,46-48,43 mm (male and 75,27-75,50  mm (female.

Mortalities of Eastern and Pacific oyster Larvae caused by the pathogens Vibrio coralliilyticus and Vibrio tubiashii.

Science.gov (United States)

Richards, Gary P; Watson, Michael A; Needleman, David S; Church, Karlee M; Häse, Claudia C

2015-01-01

Vibrio tubiashii is reported to be a bacterial pathogen of larval Eastern oysters (Crassostrea virginica) and Pacific oysters (Crassostrea gigas) and has been associated with major hatchery crashes, causing shortages in seed oysters for commercial shellfish producers. Another bacterium, Vibrio coralliilyticus, a well-known coral pathogen, has recently been shown to elicit mortality in fish and shellfish. Several strains of V. coralliilyticus, such as ATCC 19105 and Pacific isolates RE22 and RE98, were misidentified as V. tubiashii until recently. We compared the mortalities caused by two V. tubiashii and four V. coralliilyticus strains in Eastern and Pacific oyster larvae. The 50% lethal dose (LD50) of V. coralliilyticus in Eastern oysters (defined here as the dose required to kill 50% of the population in 6 days) ranged from 1.1 × 10(4) to 3.0 × 10(4) CFU/ml seawater; strains RE98 and RE22 were the most virulent. This study shows that V. coralliilyticus causes mortality in Eastern oyster larvae. Results for Pacific oysters were similar, with LD50s between 1.2 × 10(4) and 4.0 × 10(4) CFU/ml. Vibrio tubiashii ATCC 19106 and ATCC 19109 were highly infectious toward Eastern oyster larvae but were essentially nonpathogenic toward healthy Pacific oyster larvae at dosages of ≥1.1 × 10(4) CFU/ml. These data, coupled with the fact that several isolates originally thought to be V. tubiashii are actually V. coralliilyticus, suggest that V. coralliilyticus has been a more significant pathogen for larval bivalve shellfish than V. tubiashii, particularly on the U.S. West Coast, contributing to substantial hatchery-associated morbidity and mortality in recent years. Copyright © 2015, American Society for Microbiology. All Rights Reserved.

The role of the tropical West Pacific in the extreme northern hemisphere winter of 2013/14

Science.gov (United States)

Watson, Peter; Weisheimer, Antje; Knight, Jeff; Palmer, Tim

2016-04-01

In the 2013/14 winter, the eastern USA was exceptionally cold, the Bering Strait region was exceptionally warm, California was in the midst of drought and the UK suffered severe flooding. It has been suggested that elevated SSTs in the tropical West Pacific (TWPAC) were partly to blame due to their producing a Rossby wavetrain that propagated into the extratropics. We find that seasonal forecasts with the tropical atmosphere relaxed towards a reanalysis give 2013/14 winter-mean anomalies with strong similarities to those observed in the Northern Hemisphere, indicating that low-latitude anomalies had a role in the development of the extremes. Relaxing just the TWPAC produces a strong wavetrain over the North Pacific and North America in January, but not in the winter-mean. This suggests that anomalies in this region alone had a large influence, but cannot explain the extremes through the whole winter. We also examine the response to applying the observed TWPAC SST anomalies in two atmospheric general circulation models. We find that this does produce winter-mean anomalies in the North Pacific and North America resembling those observed, but that the tropical forcing of Rossby waves due to the applied SST anomalies appears stronger than that in reanalysis, except in January. Therefore both experiments indicate that the TWPAC influence was important, but the true strength of the TWPAC influence is uncertain. None of the experiments indicate a strong systematic impact of the TWPAC anomalies on Europe.

77 FR 75101 - Fisheries Off West Coast States; West Coast Salmon Fisheries; Amendment 17 to the Salmon Fishery...

Science.gov (United States)

2012-12-19

.... 120813333-2647-01] RIN 0648-BC28 Fisheries Off West Coast States; West Coast Salmon Fisheries; Amendment 17 to the Salmon Fishery Management Plan AGENCY: National Marine Fisheries Service (NMFS), National.... SUMMARY: NMFS proposes regulations to implement Amendment 17 to the Pacific Coast Salmon Fishery...

Exploring the Diversity of Field Strains of Brucella abortus Biovar 3 Isolated in West Africa

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Moussa Sanogo

2017-06-01

Full Text Available Brucellosis is one of the most widespread bacterial zoonotic diseases in the world, affecting both humans and domestic and wild animals. Identification and biotyping of field strains of Brucella are of key importance for a better knowledge of the epidemiology of brucellosis, for identifying appropriate antigens, for managing disease outbreaks and for setting up efficient preventive and control programmes. Such data are required both at national and regional level to assess potential threats for public health. Highly discriminative genotyping methods such as the multiple locus variable number of tandem repeats analysis (MLVA allow the comparison and assessment of genetic relatedness between field strains of Brucella within the same geographical area. In this study, MLVA biotyping data retrieved from the literature using a systematic review were compared using a clustering analysis and the Hunter-Gaston diversity index (HGDI. Thus, the analysis of the 42 MLVA genotyping results found in the literature on West Africa [i.e., from Ivory Coast (1, Niger (1, Nigeria (34, The Gambia (3, and Togo (3] did not allow a complete assessment of the actual diversity among field strains of Brucella. However, it provided some preliminary indications on the co-existence of 25 distinct genotypes of Brucella abortus biovar 3 in this region with 19 genotypes from Nigeria, three from Togo and one from Ivory Coast, The Gambia, and Niger. The strong and urgent need for more sustainable molecular data on prevailing strains of Brucella in this sub-region of Africa and also on all susceptible species including humans is therefore highlighted. This remains a necessary stage to allow a comprehensive understanding of the relatedness between field strains of Brucella and the epidemiology of brucellosis within West Africa countries.

Genetic Structure and Population Demographic History of a Widespread Mangrove Plant Xylocarpus granatum J. Koenig across the Indo-West Pacific Region

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Yuki Tomizawa

2017-12-01

Full Text Available Xylocarpus granatum J. Koenig is one of the most widespread core component species of mangrove forests in the Indo-West Pacific (IWP region, and as such is suitable for examining how genetic structure is generated across spatiotemporal scales. We evaluated the genetic structure of this species using maternally inherited chloroplast (cp and bi-parentally inherited nuclear DNA markers, with samples collected across the species range. Both cp and nuclear DNA showed generally similar patterns, revealing three genetic groups in the Indian Ocean, South China Sea (with Palau, and Oceania, respectively. The genetic diversity of the Oceania group was significantly lower, and the level of population differentiation within the Oceania group was significantly higher, than in the South China Sea group. These results revealed that in addition to the Malay Peninsula—a common land barrier for mangroves—there is a genetic barrier in an oceanic region of the West Pacific that prevents gene flow among populations. Moreover, demographic inference suggested that these patterns were generated in relation to sea level changes during the last glacial period and the emergence of Sahul Shelf which lied northwest of Australia. We propose that the three genetic groups should be considered independent conservation units, and that the Oceania group has a higher conservation priority.

A decadal tropical Pacific condition unfavorable to central Pacific El Niño

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Zhong, Wenxiu; Zheng, Xiao-Tong; Cai, Wenju

2017-08-01

The frequency of central Pacific (CP) El Niño events displays strong decadal variability but the associated dynamics are unclear. The Interdecadal Pacific Oscillation (IPO) and the tropical Pacific decadal variability (TPDV) are two dominant modes of tropical Pacific decadal variability that can interact with high-frequency activities. Using a 500 year control integration from the Geophysical Fluid Dynamics Laboratory Earth System Model, we find that the difference in mean state between the low-frequency and high-frequency CP El Niño periods is similar to the decadal background condition concurrently contributed by a negative IPO and a positive TPDV. This decadal state features strengthened trade winds west of the International Date Line and anomalous cool sea surface temperatures across the central tropical Pacific. As such, positive zonal advection feedback is difficult to be generated over the central to western tropical Pacific during the CP El Niño developing season, resulting in the low CP El Niño frequency.

50 CFR 660.412 - EFH identifications and descriptions for Pacific salmon.

Science.gov (United States)

2010-10-01

... Pacific salmon. 660.412 Section 660.412 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT... COAST STATES West Coast Salmon Fisheries § 660.412 EFH identifications and descriptions for Pacific salmon. Pacific salmon essential fish habitat (EFH) includes all those water bodies occupied or...

A geographically-restricted but prevalent Mycobacterium tuberculosis strain identified in the West Midlands Region of the UK between 1995 and 2008.

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Jason T Evans

2011-03-01

Full Text Available We describe the identification of, and risk factors for, the single most prevalent Mycobacterium tuberculosis strain in the West Midlands region of the UK.Prospective 15-locus MIRU-VNTR genotyping of all M. tuberculosis isolates in the West Midlands between 2004 and 2008 was undertaken. Two retrospective epidemiological investigations were also undertaken using univariable and multivariable logistic regression analysis. The first study of all TB patients in the West Midlands between 2004 and 2008 identified a single prevalent strain in each of the study years (total 155/3,056 (5% isolates. This prevalent MIRU-VNTR profile (32333 2432515314 434443183 remained clustered after typing with an additional 9-loci MIRU-VNTR and spoligotyping. The majority of these patients (122/155, 79% resided in three major cities located within a 40 km radius. From the apparent geographical restriction, we have named this the "Mercian" strain. A multivariate analysis of all TB patients in the West Midlands identified that infection with a Mercian strain was significantly associated with being UK-born (OR =  9.03, 95%CI = 4.56-17.87, p65 years old (OR = 0.25, 95% CI = 0.09-0.67, p < 0.01. A second more detailed investigation analyzed a cohort of 82 patients resident in Wolverhampton between 2003 and 2006. A significant association with being born in the UK remained after a multivariate analysis (OR = 9.68, 95% CI = 2.00-46.78, p < 0.01 and excess alcohol intake and cannabis use (OR = 6.26, 95%CI = 1.45-27.02, p =  .01 were observed as social risk factors for infection.The continued consistent presence of the Mercian strain suggests ongoing community transmission. Whilst significant associations have been found, there may be other common risk factors yet to be identified. Future investigations should focus on targeting the relevant risk groups and elucidating the biological factors that mediate continued transmission of this strain.

76 FR 81851 - Fisheries Off West Coast States; West Coast Salmon Fisheries; Amendment 16 to the Salmon Fishery...

Science.gov (United States)

2011-12-29

.... 101206604-1758-02] RIN 0648-BA55 Fisheries Off West Coast States; West Coast Salmon Fisheries; Amendment 16 to the Salmon Fishery Management Plan AGENCY: National Marine Fisheries Service (NMFS), National...) to implement Amendment 16 to the Pacific Coast Salmon Fishery Management Plan for Commercial and...

76 FR 65673 - Fisheries Off West Coast States; West Coast Salmon Fisheries; Amendment 16 to the Salmon Fishery...

Science.gov (United States)

2011-10-24

.... 101206604-1620-01] RIN 0648-BA55 Fisheries Off West Coast States; West Coast Salmon Fisheries; Amendment 16 to the Salmon Fishery Management Plan AGENCY: National Marine Fisheries Service (NMFS), National... implement Amendment 16 to the Pacific Coast Salmon Fishery Management Plan for Commercial and Recreational...

78 FR 10557 - Fisheries Off West Coast States; West Coast Salmon Fisheries; Amendment 17 to the Salmon Fishery...

Science.gov (United States)

2013-02-14

.... 120813333-3107-02] RIN 0648-BC28 Fisheries Off West Coast States; West Coast Salmon Fisheries; Amendment 17 to the Salmon Fishery Management Plan AGENCY: National Marine Fisheries Service (NMFS), National... implement Amendment 17 to the Pacific Coast Salmon Fishery Management Plan for Commercial and Recreational...

78 FR 77658 - Pacific Fishery Management Council; Public Meeting

Science.gov (United States)

2013-12-24

... Pacific Fishery Management Council's (Pacific Council) Highly Migratory Species Management Team (HMSMT... Fishery Management Council; Public Meeting AGENCY: National Marine Fisheries Service (NMFS), National.... Potential changes to management measures for the west coast drift gillnet fishery. 2. Developments to...

78 FR 78824 - North Pacific Fishery Management Council; Public Meeting

Science.gov (United States)

2013-12-27

...-17 at the Hilton Hotel, 500 West Third Avenue, Katmai/King Salmon, Anchorage, AK. DATES: The workshop... Anchorage Hilton Hotel, 500 West Third Avenue, Anchorage, AK. Council address: North Pacific Fishery...

A new skate genus Orbiraja (Rajiformes: Rajidae) from the Indo-West Pacific.

Science.gov (United States)

Last, Peter R; Weigmann, Simon; Dumale, Don

2016-11-02

Molecular analyses and information gleaned from an examination of the newly available adult male of the North-West Pacific skate, Okamejei jensenae Last & Lim, supported earlier concerns that the species might be mis-assigned. Morphological data based on this specimen supported its placement in a new genus Orbiraja that is assigned to the recently named Rostrorajini based on molecular evidence. This subgroup of the family Rajidae also includes Malacoraja, Neoraja, Rostroraja and an unresolved 'amphi-American Assemblage' (sensu McEachran & Dunn, 1998). Orbiraja is unique within the rajids in having the combination of three, very closely spaced median thorn rows on the tail, no dark-edged ventral pores, and a clasper skeleton with a prominent accessory terminal 3 cartilage formed by a medio-distal extension of the accessory terminal 2 cartilage. Its spiracle appears to be situated posteriorly with respect to the orbit. The group contains two other nominal species, Orbiraja powelli (Alcock) and O. philipi (Lloyd), and an un-named species from Indonesia that needs further investigation. Orbiraja jensenae is rediagnosed based on characteristics of the adult male.

Strong trans-Pacific break and local conservation units in the Galapagos shark (Carcharhinus galapagensis) revealed by genome-wide cytonuclear markers.

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Pazmiño, Diana A; Maes, Gregory E; Green, Madeline E; Simpfendorfer, Colin A; Hoyos-Padilla, E Mauricio; Duffy, Clinton J A; Meyer, Carl G; Kerwath, Sven E; Salinas-de-León, Pelayo; van Herwerden, Lynne

2018-05-01

The application of genome-wide cytonuclear molecular data to identify management and adaptive units at various spatio-temporal levels is particularly important for overharvested large predatory organisms, often characterized by smaller, localized populations. Despite being "near threatened", current understanding of habitat use and population structure of Carcharhinus galapagensis is limited to specific areas within its distribution. We evaluated population structure and connectivity across the Pacific Ocean using genome-wide single-nucleotide polymorphisms (~7200 SNPs) and mitochondrial control region sequences (945 bp) for 229 individuals. Neutral SNPs defined at least two genetically discrete geographic groups: an East Tropical Pacific (Mexico, east and west Galapagos Islands), and another central-west Pacific (Lord Howe Island, Middleton Reef, Norfolk Island, Elizabeth Reef, Kermadec, Hawaii and Southern Africa). More fine-grade population structure was suggested using outlier SNPs: west Pacific, Hawaii, Mexico, and Galapagos. Consistently, mtDNA pairwise Φ ST defined three regional stocks: east, central and west Pacific. Compared to neutral SNPs (F ST  = 0.023-0.035), mtDNA exhibited more divergence (Φ ST  = 0.258-0.539) and high overall genetic diversity (h = 0.794 ± 0.014; π = 0.004 ± 0.000), consistent with the longstanding eastern Pacific barrier between the east and central-west Pacific. Hawaiian and Southern African populations group within the west Pacific cluster. Effective population sizes were moderate/high for east/west populations (738 and 3421, respectively). Insights into the biology, connectivity, genetic diversity, and population demographics informs for improved conservation of this species, by delineating three to four conservation units across their Pacific distribution. Implementing such conservation management may be challenging, but is necessary to achieve long-term population resilience at basin and

Molecular Phylogeny Of Microbes In The Deep-Sea Sediments From Tropical West Pacific Warm Pool

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Wang, F.; Xiao, X.; Wang, P.

2005-12-01

The presence and phylogeny of bacteria and archaea in five deep-sea sediment samples collected from west Pacific Warm Pool area (WP-0, WP-1, WP-2, WP-3, WP-4), and in five sediment layers (1cm-, 3cm-, 6cm-, 10cm-, 12cm- layer) of the 12-cm sediment core of WP-0 were checked and compared. The microbial diversity in the five deep-sea sediments were similar as revealed by denaturing gradient gel electrophoresis, and all of them contained members of non-thermophilic marine group I crenarchaeota as the predominant archaeal group. The composition of methylotrophs including methanotrophs, sulfate reducing bacteria in the WP-0 sediment core were further investigated by molecular marker based analysis of mxaF, pmoA, dsrAB, specific anoxic methane oxidation archaeal and sulfate reducing bacterial 16S rRNA genes. From MxaF amino acid sequence analysis, it was demonstrated that microbes belonging to α - Proteobacteria most related to Hyphomicrobium and Methylobacterium were dominant aerobic methylotrophs in this deep-sea sediment; and small percentage of type II methanotrophs affiliating closest to Methylocystis and Methylosinus were also detected in this environment. mxaF quantitative PCR results showed that in the west Pacific WP sediment there existed around 3× 10 4-5 methylotrophs per gram sediment, 10-100 times more than that in samples collected from several other deep-sea Pacific sediment sample, but about 10 times less than that present in samples collected from rice and flower garden soil. Diverse groups of novel archaea (named as WPA), not belonging to any known archaeal lineages were checked out. They could be placed in the euryarchaeota kingdom, separated into two distinct groups, the main group was peripherally related with methanogens, the other group related with Thermoplasma. Possible sulfate reducing bacterial related with Desulfotomaculum, Desulfacinum, Desulfomonile and Desulfanuticus were also detected in our study. The vertical distributions of WPA

Rapid estimation of the moment magnitude of the 2011 off the Pacific coast of Tohoku earthquake from coseismic strain steps

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Itaba, S.; Matsumoto, N.; Kitagawa, Y.; Koizumi, N.

2012-12-01

The 2011 off the Pacific coast of Tohoku earthquake, of moment magnitude (Mw) 9.0, occurred at 14:46 Japan Standard Time (JST) on March 11, 2011. The coseismic strain steps caused by the fault slip of this earthquake were observed in the Tokai, Kii Peninsula and Shikoku by the borehole strainmeters which were carefully set by Geological Survey of Japan, AIST. Using these strain steps, we estimated a fault model for the earthquake on the boundary between the Pacific and North American plates. Our model, which is estimated only from several minutes' strain data, is largely consistent with the final fault models estimated from GPS and seismic wave data. The moment magnitude can be estimated about 6 minutes after the origin time, and 4 minutes after wave arrival. According to the fault model, the moment magnitude of the earthquake is 8.7. On the other hand, based on the seismic wave, the prompt report of the magnitude which the Japan Meteorological Agency announced just after earthquake occurrence was 7.9. Generally coseismic strain steps are considered to be less reliable than seismic waves and GPS data. However our results show that the coseismic strain steps observed by the borehole strainmeters, which were carefully set and monitored, can be relied enough to decide the earthquake magnitude precisely and rapidly. In order to grasp the magnitude of a great earthquake earlier, several methods are now being suggested to reduce the earthquake disasters including tsunami. Our simple method of using strain steps is one of the strong methods for rapid estimation of the magnitude of great earthquakes.

Redescription of the Indo-West Pacific cardinalfishes (Perciformes: Apogonidae) Rhabdamia spilota Allen Kuiter 1994 and R. gracilis (Bleeker 1856).

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Yoshida, Tomohiro; Motomura, Hiroyuki

2018-01-31

Rhabdamia spilota Allen Kuiter 1994 (Apogonidae), a poorly known cardinalfish previously known only from the Philippines, Indonesia and the Red Sea, is redescribed on the basis of 70 specimens (20.9-61.2 mm standard length) (including types), from the Indo-West Pacific (Red Sea, Andaman Sea, Japan, South China Sea, the Philippines, Indonesia, New Caledonia, and Australia). Because most reports of the similar species R. gracilis (Bleeker 1856), following its original description, were based on misidentifications, R. gracilis is also redescribed (based on 98 Indo-West Pacific specimens from Seychelles, Maldives, Andaman Sea, Japan, Malaysia, Indonesia, New Caledonia, and Australia, 27.9-59.3 mm standard length); a lectotype is designated for it. Rhabdamia spilota differs from R. gracilis in having 27-33 (mode 30-31) developed gill rakers [vs. 22-27 (mode 24) in the latter], 27-33 (30) gill rakers including rudiments [vs. 23-27 (24-25)], a black stripe from the jaw tips to the anterior margin of the orbit (vs. black pigments only at snout and tip of lower jaw), 3-6 reddish brown to blackish blotches on the opercle and anterior of body (vs. blotches absent), and indistinct black pigment restricted to caudal fin outer margins (vs. pigment scattered over entire fin). Rhabdamia gracilis exhibits sexual dichromatism, female specimens larger than 41.3 mm SL having one or two black stripes on the lateral surface of the body; the stripes are absent in males and smaller females. No evidence of sexual dichromatism was found in R. spilota.

PODs cruise - Pacific Orcinus Distrbution Survey

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Orcinus spp. occur in the Pacific Ocean throughout the West Coast of North America. Data concerning their precise locations and abundance are critical to...

Cloud structure evolution of heavy rain events from the East-West Pacific Ocean: a combined global observation analysis

Science.gov (United States)

Sekaranom, A. B.; Nurjani, E.; Pujiastuti, I.

2018-04-01

Heavy rain events are often associated with flood hazards as one of the most devastating events across the globe. It is therefore essential to identify the evolution of heavy rainfall cloud structures, primarily from global satellite observation, as a tool to provide better disaster early warning systems. To identify the mechanism of heavy rainfall systems and its relationship with cloud development, especially over The Pacific Ocean, we aim to study the westward evolution of the convective systems over this area. Several datasets from Tropical Rainfall Measuring Mission (TRMM), CloudSat GEOPROF product, and ECMWF-reanalysis (ERA) interim were utilized to characterize the evolution. Geolocation and orbital time-lag analysis of the three different datasets for more than 8 years (2006-2014) could provide information related to the evolution of cloud structures associated with heavy rain events. In the first step, a heavy rainfall database was generated from TRMM. The CloudSat coordinate and time position were then matched with TRMM coordinate and time position. All of the processes were programatically conducted in fortran programming language. The result shows a transition between East and West Pacific ocean for TMI data.

The Indo-West Pacific alpheid shrimp Athanas dimorphus Ortmann, 1894: first record for Brazil and the western Atlantic

Directory of Open Access Journals (Sweden)

Paulo P. G. Pachelle

Full Text Available The alpheid shrimp Athanas dimorphus Ortmann, 1894, common and widespread throughout the Indo-West Pacific, is reported for the first time from Brazil, representing the first invasive alpheid species in Brazil, and the first species of the genus Athanas Leach, 1816 introduced to the western Atlantic. The present record is based on several specimens collected at two localities in Ceará, Pedra Rachada beach near the town of Paracuru, and Meireles beach in Fortaleza. Athanas dimorphus is very common at the second site, suggesting that a population of this species is now established in northwestern Brazil. An updated list of marine and freshwater decapods accidentally or voluntarily introduced to Brazil is provided.

Indian Ocean warming modulates Pacific climate change.

Science.gov (United States)

Luo, Jing-Jia; Sasaki, Wataru; Masumoto, Yukio

2012-11-13

It has been widely believed that the tropical Pacific trade winds weakened in the last century and would further decrease under a warmer climate in the 21st century. Recent high-quality observations, however, suggest that the tropical Pacific winds have actually strengthened in the past two decades. Precise causes of the recent Pacific climate shift are uncertain. Here we explore how the enhanced tropical Indian Ocean warming in recent decades favors stronger trade winds in the western Pacific via the atmosphere and hence is likely to have contributed to the La Niña-like state (with enhanced east-west Walker circulation) through the Pacific ocean-atmosphere interactions. Further analysis, based on 163 climate model simulations with centennial historical and projected external radiative forcing, suggests that the Indian Ocean warming relative to the Pacific's could play an important role in modulating the Pacific climate changes in the 20th and 21st centuries.

Indian Ocean warming modulates Pacific climate change

Science.gov (United States)

Luo, Jing-Jia; Sasaki, Wataru; Masumoto, Yukio

2012-01-01

It has been widely believed that the tropical Pacific trade winds weakened in the last century and would further decrease under a warmer climate in the 21st century. Recent high-quality observations, however, suggest that the tropical Pacific winds have actually strengthened in the past two decades. Precise causes of the recent Pacific climate shift are uncertain. Here we explore how the enhanced tropical Indian Ocean warming in recent decades favors stronger trade winds in the western Pacific via the atmosphere and hence is likely to have contributed to the La Niña-like state (with enhanced east–west Walker circulation) through the Pacific ocean–atmosphere interactions. Further analysis, based on 163 climate model simulations with centennial historical and projected external radiative forcing, suggests that the Indian Ocean warming relative to the Pacific’s could play an important role in modulating the Pacific climate changes in the 20th and 21st centuries. PMID:23112174

Himantura tutul sp. nov. (Myliobatoidei: Dasyatidae), a new ocellated whipray from the tropical Indo-West Pacific, described from its cytochrome-oxidase I gene sequence.

Science.gov (United States)

Borsa, Philippe; Durand, Jean-Dominique; Shen, Kang-Ning; Arlyza, Irma S; Solihin, Dedy D; Berrebi, Patrick

2013-02-01

It has been previously established that the Leopard Whipray, Himantura leoparda, consists of two genetically isolated, cryptic species, provisionally designated as 'Cluster 1' and 'Cluster 4' (Arlyza et al., Mol. Phylogenet. Evol. 65 (2013) [1]). Here, we show that the two cryptic species differ by the spotting patterns on the dorsal surface of adults: Cluster-4 individuals tend to have larger-ocellated spots, which also more often have a continuous contour than Cluster-1 individuals. We show that H. leoparda's holotype has the typical larger-ocellated spot pattern, designating Cluster 4 as the actual H. leoparda. The other species (Cluster 1) is described as Himantura tutul sp. nov. on the basis of the nucleotide sequence of a 655-base pair fragment of its cytochrome-oxidase I gene (GenBank accession No. JX263335). Nucleotide synapomorphies at this locus clearly distinguish H. tutul sp. nov. from all three other valid species in the H. uarnak species complex, namely H. leoparda, H. uarnak, and H. undulata. H. tutul sp. nov. has a wide distribution in the Indo-West Pacific, from the shores of eastern Africa to the Indo-Malay archipelago. H. leoparda under its new definition has a similarly wide Indo-West Pacific distribution. Copyright © 2013 Académie des sciences. Published by Elsevier SAS. All rights reserved.

Analysis of longitudinal variations in North Pacific alkalinity

Science.gov (United States)

Fry, C.; Tyrrell, T.; Achterberg, E. P.

2016-02-01

Carbon measurements in the ocean lack the coverage of physical measurements, so approximate alkalinity is predicted where data is unavailable. Surface alkalinity in the North Pacific is poorly characterised by predictive algorithms. Understanding the processes affecting alkalinity in this area can improve the equations. We investigated the causes of regional variations in alkalinity using GLODAPv2. We tested different hypotheses for the causes of three longitudinal phenomena in surface ocean values of Alk*, a tracer of calcium carbonate cycling. These phenomena are: (a) an increase in Alk* from east to west at 50°N, (b) an increase in Alk* from west to east at 30°N, and (c) a lack of a strong increase in Alk* from west to east in the equatorial upwelling area. We found that the most likely cause of higher Alk* on the western side of the subpolar North Pacific (at 50°N) is that denser isopycnals with higher Alk* lie at shallower depths on the western side than the eastern side. At 30°N, the main cause of higher Alk* on the eastern side of the basin is upwelling along the continental shelf of southwestern North America. Along the equator, our analyses suggest that the absence of a strong east-west trend is because the more intense upwelling on the eastern side of the basin does not, under normal conditions, lead to strong elevation of Alk*. However, surface Alk* is more strongly elevated in the eastern Equatorial Pacific during negative phases of the El-Nino-Southern Oscillation, probably because the upwelled water comes from greater depth at these times.

Decadal atmosphere-ocean variations in the Pacific

Science.gov (United States)

Trenberth, Kevin E.; Hurrell, James W.

1994-03-01

Considerable evidence has emerged of a substantial decade-long change in the north Pacific atmosphere and ocean lasting from about 1976 to 1988. Observed significant changes in the atmospheric circulation throughout the troposphere revealed a deeper and eastward shifted Aleutian low pressure system in the winter half year which advected warmer and moister air along the west coast of North America and into Alaska and colder air over the north Pacific. Consequently, there were increases in temperatures and sea surface temperatures (SSTs) along the west coast of North America and Alaska but decreases in SSTs over the central north Pacific, as well as changes in coastal rainfall and streamflow, and decreases in sea ice in the Bering Sea. Associated changes occurred in the surface wind stress, and, by inference, in the Sverdrup transport in the north Pacific Ocean. Changes in the monthly mean flow were accompanied by a southward shift in the storm tracks and associated synoptic eddy activity and in the surface ocean sensible and latent heat fluxes. In addition to the changes in the physical environment, the deeper Aleutian low increased the nutrient supply as seen through increases in total chlorophyll in the water column, phytoplankton and zooplankton. These changes, along with the altered ocean currents and temperatures, changed the migration patterns and increased the stock of many fish species. A north Pacific (NP) index is defined to measure the decadal variations, and the temporal variability of the index is explored on daily, annual, interannual and decadal time scales. The dominant atmosphere-ocean relation in the north Pacific is one where atmospheric changes lead SSTs by one to two months. However, strong ties are revealed with events in the tropical Pacific, with changes in tropical Pacific SSTs leading SSTs in the north Pacific by three months. Changes in the storm tracks in the north Pacific help to reinforce and maintain the anomalous circulation in the

Global phylogeography of the widely introduced North West Pacific ascidian Styela clava.

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Goldstien, Sharyn J; Dupont, Lise; Viard, Frédérique; Hallas, Paul J; Nishikawa, Teruaki; Schiel, David R; Gemmell, Neil J; Bishop, John D D

2011-02-22

The solitary ascidian Styela clava Herdman, 1882 is considered to be native to Japan, Korea, northern China and the Russian Federation in the NW Pacific, but it has spread globally over the last 80 years and is now established as an introduced species on the east and west coasts of North America, Europe, Australia and New Zealand. In eastern Canada it reaches sufficient density to be a serious pest to aquaculture concerns. We sequenced a fragment of the cytochrome oxidase subunit I mitochondrial gene (COI) from a total of 554 individuals to examine the genetic relationships of 20 S. clava populations sampled throughout the introduced and native ranges, in order to investigate invasive population characteristics. The data presented here show a moderate level of genetic diversity throughout the northern hemisphere. The southern hemisphere (particularly New Zealand) displays a greater amount of haplotype and nucleotide diversity in comparison. This species, like many other invasive species, shows a range of genetic diversities among introduced populations independent of the age of incursion. The successful establishment of this species appears to be associated with multiple incursions in many locations, while other locations appear to have experienced rapid expansion from a potentially small population with reduced genetic diversity. These contrasting patterns create difficulties when attempting to manage and mitigate a species that continues to spread among ports and marinas around the world.

Ground Level Ozone Regional Background Characteristics In North-west Pacific Rim

Science.gov (United States)

Chiang, C.; Fan, J.; Chang, J. S.

2007-12-01

Understanding the ground level ozone regional background characteristics is essential in understanding the contribution of long-range transport of pollutants from Asia Mainland to air quality in downwind areas. In order to understand this characteristic in north-west Pacific Rim, we conducted a coupled study using ozone observation from regional background stations and 3-D regional-scale chemical transport model simulations. We used O3, CO, wind speed and wind direction data from two regional background stations and ¡§other stations¡¨ over a ten year period and organized several numerical experiments to simulate one spring month in 2003 to obtain a deeper understanding. The so called ¡§other stations¡¨ had actually been named as background stations under various governmental auspices. But we found them to be often under strong influence of local pollution sources with strong diurnal or slightly longer time variations. We found that the Yonagunijima station (24.74 N, 123.02 E) and Heng-Chuen station (21.96 N,120.78 E), about a distance of 400 km apart, have almost the same ozone time series pattern. For these two stations in 2003, correlation coefficients (R2) for annual observed ozone concentration is about 0.64, in the springtime it is about 0.7, and in a one-month period at simulation days it is about 0.76. These two stations have very little small scale variations in all the variables studied. All variations are associated with large scale circulation changes. This is especially so at Yonagunijima station. Using a 3-D regional-scale chemical transport model for East Asia region including contribution from Asia continental outflow and neighboring island pollution areas we found that the Yonagunijima and HengChuen station are indeed free of pollutants from all neighboring areas keeping in mind that pollutants from Taiwan area is never far away. Ozone concentrations in these two stations are dominated by synoptic scale weather patterns, with diffused

Impacts of Pacific SSTs on California Winter Precipitation

Science.gov (United States)

Myoung, B.; Kafatos, M.

2017-12-01

Consecutive below-normal precipitation years and resulted multi-year droughts are critical issues as the recent 2012-2015 drought of California caused tremendous socio-economic damages. However, studies on the causes of the multi-year droughts lack. In this study, focusing on the three multi-year droughts (1999-2002, 2007-2009, and 2012-2015) in California during the last two decades, we investigated the atmospheric and oceanic characteristics of the three drought events for winter (December-February, DJF) in order to understand large-scale circulations that are responsible for initiation, maintenance, and termination of the droughts. It was found that abnormally developed upper-tropospheric ridges over the North Pacific are primarily responsible for precipitation deficits and then droughts. These ridges developed when negative sea surface temperature anomalies (SSTs) including La Niña events are pervasive in the tropical Pacific. After 3 or 4 years, the droughts ended under the opposite conditions; upper-tropospheric troughs in the North Pacific with El Niño events in the tropics. Results of Empirical Orthogonal Function (EOF) analysis for the 41-year (1974/75-2014/15) 500 hPa geopotential height in DJF revealed that, during the drought periods, the positive phases of the first and second EOF mode (EOF1+ and EOF2+, respectively) were active one by one, positioning upper-tropospheric ridges over the North Pacific. While EOF1+ is associated with cold tropical central Pacific and negative Pacific Decadal Oscillation (PDO), EOF2+ is associated with the tropical east-west SST dipole pattern (i.e., warm western tropical Pacific and cool eastern tropical Pacific near the southern Peru). Based on these results, we developed a regression model for winter precipitation. While dominant SST factors differ by decades, for the recent two decades (1994/1995-2014/2015), 56% variability of DJF precipitation is explained by the tropical east-west SST dipole pattern and PDO (NINO3

Indo-Pacific sea surface temperature influences on failed consecutive rainy seasons over eastern Africa

Science.gov (United States)

Hoell, Andrew; Funk, Christopher C.

2014-01-01

Rainfall over eastern Africa (10°S–10°N; 35°E–50°E) is bimodal, with seasonal maxima during the "long rains" of March–April–May (MAM) and the "short rains" of October–November–December (OND). Below average precipitation during consecutive long and short rains seasons over eastern Africa can have devastating long-term impacts on water availability and agriculture. Here, we examine the forcing of drought during consecutive long and short rains seasons over eastern Africa by Indo-Pacific sea surface temperatures (SSTs). The forcing of eastern Africa precipitation and circulation by SSTs is tested using ten ensemble simulations of a global weather forecast model forced by 1950–2010 observed global SSTs. Since the 1980s, Indo-Pacific SSTs have forced more frequent droughts spanning consecutive long and short rains seasons over eastern Africa. The increased frequency of dry conditions is linked to warming SSTs over the Indo-west Pacific and to a lesser degree to Pacific Decadal Variability. During MAM, long-term warming of tropical west Pacific SSTs from 1950–2010 has forced statistically significant precipitation reductions over eastern Africa. The warming west Pacific SSTs have forced changes in the regional lower tropospheric circulation by weakening the Somali Jet, which has reduced moisture and rainfall over the Horn of Africa. During OND, reductions in precipitation over recent decades are oftentimes overshadowed by strong year-to-year precipitation variability forced by the Indian Ocean Dipole and the El Niño–Southern Oscillation.

High-resolution ocean and atmosphere pCO2 time-series measurements from mooring WA_125W_47N in the North Pacific Ocean, US West Coast from 2006-06-23 to 2015-03-05 (NODC Accession 0115322)

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National Oceanic and Atmospheric Administration, Department of Commerce — NCEI Accession 0115322 includes chemical, meteorological, physical and time series data collected from MOORING_WA_125W_47N in the North Pacific Ocean, US West Coast...

Analysis of longitudinal variations in North Pacific alkalinity to improve predictive algorithms

Science.gov (United States)

Fry, Claudia H.; Tyrrell, Toby; Achterberg, Eric P.

2016-10-01

The causes of natural variation in alkalinity in the North Pacific surface ocean need to be investigated to understand the carbon cycle and to improve predictive algorithms. We used GLODAPv2 to test hypotheses on the causes of three longitudinal phenomena in Alk*, a tracer of calcium carbonate cycling. These phenomena are (a) an increase from east to west between 45°N and 55°N, (b) an increase from west to east between 25°N and 40°N, and (c) a minor increase from west to east in the equatorial upwelling region. Between 45°N and 55°N, Alk* is higher on the western than on the eastern side, and this is associated with denser isopycnals with higher Alk* lying at shallower depths. Between 25°N and 40°N, upwelling along the North American continental shelf causes higher Alk* in the east. Along the equator, a strong east-west trend was not observed, even though the upwelling on the eastern side of the basin is more intense, because the water brought to the surface is not high in Alk*. We created two algorithms to predict alkalinity, one for the entire Pacific Ocean north of 30°S and one for the eastern margin. The Pacific Ocean algorithm is more accurate than the commonly used algorithm published by Lee et al. (2006), of similar accuracy to the best previously published algorithm by Sasse et al. (2013), and is less biased with longitude than other algorithms in the subpolar North Pacific. Our eastern margin algorithm is more accurate than previously published algorithms.

Status of coral reefs of Upolu (Independent State of Samoa) in the South West Pacific and recommendations to promote resilience and recovery of coastal ecosystems

KAUST Repository

Ziegler, Maren

2018-03-23

Coral reef ecosystems worldwide are immediately threatened by the impacts of climate change. Here we report on the condition of coral reefs over 83 km of coastline at the island of Upolu, Samoa in the remote South West Pacific in 2016 during the Tara Pacific Expedition. Despite the distance to large urban centers, coral cover was extremely low (<1%) at approximately half of the sites and below 10% at 78% of sites. Two reef fish species, Acanthurus triostegus and Zanclus cornutus, were 10% smaller at Upolu than at neighboring islands. Importantly, coral cover was higher within marine protected areas, indicating that local management action remains a useful tool to support the resilience of local reef ecosystems to anthropogenic impacts. This study may be interpreted as cautionary sign for reef ecosystem health in remote locations on this planet, reinforcing the need to immediately reduce anthropogenic impacts on a global scale.

Status of coral reefs of Upolu (Independent State of Samoa) in the South West Pacific and recommendations to promote resilience and recovery of coastal ecosystems

KAUST Repository

Ziegler, Maren; Qué ré , Gaë lle; Ghiglione, Jean-Franç ois; Iwankow, Guillaume; Barbe, Valé rie; Boissin, Emilie; Wincker, Patrick; Planes, Serge; Voolstra, Christian R.

2018-01-01

Coral reef ecosystems worldwide are immediately threatened by the impacts of climate change. Here we report on the condition of coral reefs over 83 km of coastline at the island of Upolu, Samoa in the remote South West Pacific in 2016 during the Tara Pacific Expedition. Despite the distance to large urban centers, coral cover was extremely low (<1%) at approximately half of the sites and below 10% at 78% of sites. Two reef fish species, Acanthurus triostegus and Zanclus cornutus, were 10% smaller at Upolu than at neighboring islands. Importantly, coral cover was higher within marine protected areas, indicating that local management action remains a useful tool to support the resilience of local reef ecosystems to anthropogenic impacts. This study may be interpreted as cautionary sign for reef ecosystem health in remote locations on this planet, reinforcing the need to immediately reduce anthropogenic impacts on a global scale.

Boundary scavenging in the Pacific Ocean

International Nuclear Information System (INIS)

Anderson, R.F.; Lao, Y.; Broecker, W.S.; Trumbore, S.E.; Hofmann, H.J.; Wolfli, W.

1990-01-01

Concentrations of U, Th, 231 Pa and 10 Be were measured in Holocene sediments from two cores collected off the west coast of South America, two cores from the East Pacific Rise, two from the equatorial Pacific and one from the south Pacific central gyre. Our results, together with data from 5 cores reported in the literature, show that boundary scavenging plays a major role in the removal of 10 Be from the Pacific Ocean. Deposition rates of 10 Be at three margin sites are more than an order of magnitude greater than at sites of red clay accumulation in the deep central Pacific. Deposition of 231 Pa is 4 to 5-fold greater at the margin sites. The residence time of 10 Be with respect to chemical scavenging, defined as its inventory in the water column divided by its rate of removal to the sediments, varies regionally from >1000 years at the red-clay sites in the deep central Pacific to ∝100 years at the margin sites. Different factors control boundary scavenging of Pa and Be. For example, scavenging of 231 Pa is enhanced by metal-oxide coatings of particles, whereas this seems to have little influence on the scavenging of 10 Be. (orig.)

Antibody responses in humans infected with newly emerging strains of West Nile Virus in Europe.

Directory of Open Access Journals (Sweden)

Stefan Chabierski

Full Text Available Infection with West Nile Virus (WNV affects an increasing number of countries worldwide. Although most human infections result in no or mild flu-like symptoms, the elderly and those with a weakened immune system are at higher risk for developing severe neurological disease. Since its introduction into North America in 1999, WNV has spread across the continental United States and caused annual outbreaks with a total of 36,000 documented clinical cases and ∼1,500 deaths. In recent years, outbreaks of neuroinvasive disease also have been reported in Europe. The WNV strains isolated during these outbreaks differ from those in North America, as sequencing has revealed that distinct phylogenetic lineages of WNV concurrently circulate in Europe, which has potential implications for the development of vaccines, therapeutics, and diagnostic tests. Here, we studied the human antibody response to European WNV strains responsible for outbreaks in Italy and Greece in 2010, caused by lineage 1 and 2 strains, respectively. The WNV structural proteins were expressed as a series of overlapping fragments fused to a carrier-protein, and binding of IgG in sera from infected persons was analyzed. The results demonstrate that, although the humoral immune response to WNV in humans is heterogeneous, several dominant peptides are recognized.

700 fathom Depth Contour for Pacific Fishery Management Council's June 2005 Preferred Alternative, Groundfish EFH Final EIS

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Pacific States Marine Fisheries Commission — These data depict the primary 700 fathom isobath within the West Coast Exclusive Economic Zone (EEZ). The area to the west of this depth contour was designated by...

Interannual variability of western North Pacific SST anomalies and its impact on North Pacific and North America

Science.gov (United States)

Park, Jae-Heung; An, Soon-Il; Kug, Jong-Seong

2017-12-01

In this study, the interannual variability of sea surface temperature (SST) and its atmospheric teleconnection over the western North Pacific (WNP) toward the North Pacific/North America during boreal winter are investigated. First, we defined the WNP mode as the first empirical orthogonal function (EOF) mode of SST anomalies over the WNP region (100-165°E, 0-35°N), of which the principle component time-series are significantly correlated with several well-known climate modes such as the warm pool mode which is the second EOF mode of the tropical to North Pacific SST anomalies, North Pacific oscillation (NPO), North Pacific gyre oscillation (NPGO), and central Pacific (CP)-El Niño at 95% confidence level, but not correlated with the eastern Pacific (EP)-El Niño. The warm phase of the WNP mode (sea surface warming) is initiated by anomalous southerly winds through reduction of wind speed with the background of northerly mean winds over the WNP during boreal winter, i.e., reduced evaporative cooling. Meanwhile, the atmospheric response to the SST warming pattern and its diabatic heating further enhance the southerly wind anomaly, referred to the wind-evaporation-SST (WES) feedback. Thus, the WNP mode is developed and maintained through winter until spring, when the northerly mean wind disappears. Furthermore, it is also known that anomalous upper-level divergence associated with WNP mode leads to the NPO-like structure over the North Pacific and the east-west pressure contrast pattern over the North America through Rossby wave propagation, impacting the climate over the North Pacific and North America.

Gill monogenean communities (Platyhelminthes, Monogenea, Dactylogyridae) of butterflyfishes from tropical Indo-West Pacific Islands.

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Reverter, Miriam; Cutmore, Scott C; Bray, Rodney; Cribb, Thomas H; Sasal, Pierre

2016-10-01

We studied the monogenean communities of 34 species of butterflyfish from the tropical Indo-West Pacific, identifying 13 dactylogyrid species (including two species that are presently undescribed). Monogenean assemblages differed significantly between host species in terms of taxonomic structure, intensity and prevalence. Parasite richness ranged from 0 (Chaetodon lunulatus) to 11 (C. auriga, C. citrinellus and C. lunula). Host specificity varied between the dactylogyrids species, being found on 2-29 of the 34 chaetodontid species examined. Sympatric butterflyfish species were typically parasitized by different combinations of dactylogyrid species, suggesting the existence of complex host-parasite interactions. We identified six clusters of butterflyfish species based on the similarities of their dactylogyrid communities. Dactylogyrid richness and diversity were not related to host size, diet specialization, depth range or phylogeny of butterflyfish species. However, there was a weak positive correlation between monogenean richness and diversity and host geographical range. Most communities of dactylogyrids were dominated by Haliotrema aurigae and H. angelopterum, indicating the importance of the genus Haliotrema in shaping monogenean communities of butterflyfishes. This study casts light on the structure of the monogenean communities of butterflyfishes, suggesting that the diversity and complexity of community structures arises from a combination of host species-specific parameters.

Evidence of strain structure in Plasmodium falciparum var gene repertoires in children from Gabon, West Africa.

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Day, Karen P; Artzy-Randrup, Yael; Tiedje, Kathryn E; Rougeron, Virginie; Chen, Donald S; Rask, Thomas S; Rorick, Mary M; Migot-Nabias, Florence; Deloron, Philippe; Luty, Adrian J F; Pascual, Mercedes

2017-05-16

Existing theory on competition for hosts between pathogen strains has proposed that immune selection can lead to the maintenance of strain structure consisting of discrete, weakly overlapping antigenic repertoires. This prediction of strain theory has conceptual overlap with fundamental ideas in ecology on niche partitioning and limiting similarity between coexisting species in an ecosystem, which oppose the hypothesis of neutral coexistence. For Plasmodium falciparum , strain theory has been specifically proposed in relation to the major surface antigen of the blood stage, known as Pf EMP1 and encoded by the multicopy multigene family known as the var genes. Deep sampling of the DBLα domain of var genes in the local population of Bakoumba, West Africa, was completed to define whether patterns of repertoire overlap support a role of immune selection under the opposing force of high outcrossing, a characteristic of areas of intense malaria transmission. Using a 454 high-throughput sequencing protocol, we report extremely high diversity of the DBLα domain and a large parasite population with DBLα repertoires structured into nonrandom patterns of overlap. Such population structure, significant for the high diversity of var genes that compose it at a local level, supports the existence of "strains" characterized by distinct var gene repertoires. Nonneutral, frequency-dependent competition would be at play and could underlie these patterns. With a computational experiment that simulates an intervention similar to mass drug administration, we argue that the observed repertoire structure matters for the antigenic var diversity of the parasite population remaining after intervention.

Sea-Level Trend Uncertainty With Pacific Climatic Variability and Temporally-Correlated Noise

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Royston, Sam; Watson, Christopher S.; Legrésy, Benoît; King, Matt A.; Church, John A.; Bos, Machiel S.

2018-03-01

Recent studies have identified climatic drivers of the east-west see-saw of Pacific Ocean satellite altimetry era sea level trends and a number of sea-level trend and acceleration assessments attempt to account for this. We investigate the effect of Pacific climate variability, together with temporally-correlated noise, on linear trend error estimates and determine new time-of-emergence (ToE) estimates across the Indian and Pacific Oceans. Sea-level trend studies often advocate the use of auto-regressive (AR) noise models to adequately assess formal uncertainties, yet sea level often exhibits colored but non-AR(1) noise. Standard error estimates are over- or under-estimated by an AR(1) model for much of the Indo-Pacific sea level. Allowing for PDO and ENSO variability in the trend estimate only reduces standard errors across the tropics and we find noise characteristics are largely unaffected. Of importance for trend and acceleration detection studies, formal error estimates remain on average up to 1.6 times those from an AR(1) model for long-duration tide gauge data. There is an even chance that the observed trend from the satellite altimetry era exceeds the noise in patches of the tropical Pacific and Indian Oceans and the south-west and north-east Pacific gyres. By including climate indices in the trend analysis, the time it takes for the observed linear sea-level trend to emerge from the noise reduces by up to 2 decades.

Two new species of the stenopodidean shrimp genus Spongiocaris Bruce & Baba, 1973 (Crustacea: Decapoda: Spongicolidae) from the Indo-West Pacific.

Science.gov (United States)

Komai, Tomoyuki; Grave, Sammy De; Saito, Tomomi

2016-05-17

Two new species of the deep-water spongicolid genus Spongiocaris Bruce & Baba, 1973, are described and illustrated from two localities in the Indo-West Pacific. Spongiocaris panglao n. sp. is described on the basis of material from the Bohol Sea, the Philippines, at depths of 220-731 m. Spongiocaris tuerkayi n. sp. is described on the basis of material from Atlantis Bank in the southwestern Indian Ocean at depths of 743-1053 m. Among eight known congeners, both new species appear close to S. semiteres Bruce & Baba, 1973, differing in the rostral length and armature, shape of the carapace, telsonal armature, development of the grooming apparatus of the first pereopod and shape of the third pereopod chela. An identification key to the species currently assigned to Spongiocaris is presented.

NOAA/WEST COAST AND ALASKA TSUNAMI WARNING CENTER PACIFIC OCEAN RESPONSE CRITERIA

Directory of Open Access Journals (Sweden)

Garry Rogers

2008-01-01

Full Text Available New West Coast/Alaska Tsunami Warning Center (WCATWC response criteria for earthquakes occurring in the Pacific basin are presented. Initial warning decisions are based on earthquake location, magnitude, depth, and - dependent on magnitude - either distance from source or pre- computed threat estimates generated from tsunami models. The new criteria will help limit the geographical extent of warnings and advisories to threatened regions, and complement the new operational tsunami product suite.Changes to the previous criteria include: adding hypocentral depth dependence, reducing geographical warning extent for the lower magnitude ranges, setting special criteria for areas not well-connected to the open ocean, basing warning extent on pre-computed threat levels versus tsunami travel time for very large events, including the new advisory product, using the advisory product for far-offshore events in the lower magnitude ranges, and specifying distances from the coast for on-shore events which may be tsunamigenic.This report sets a baseline for response criteria used by the WCATWC considering its processing and observational data capabilities as well as its organizational requirements. Criteria are set for tsunamis generated by earthquakes, which are by far the main cause of tsunami generation (either directly through sea floor displacement or indirectly by triggering of slumps. As further research and development provides better tsunami source definition, observational data streams, and improved analysis tools, the criteria will continue to adjust. Future lines of research and development capable of providing operational tsunami warning centers with better tools are discussed.

Evolutionary relationship between Old World West Nile virus strains Evidence for viral gene flow between africa, the middle east, and europe

International Nuclear Information System (INIS)

Charrel, R.N.; Brault, A.C.; Gallian, P.; Lemasson, J.-J.; Murgue, B.; Murri, S.; Pastorino, B.; Zeller, H.; Chesse, R. de; Micco, P. de; Lamballerie, X. de

2003-01-01

Little is known about the genetic relationships between European and other Old-World strains of West Nile virus (WNV) and persistence of WNV North of Mediterranean. We characterized the complete genomes of three WNV strains from France (horse-2000), Tunisia (human-1997) and Kenya (mosquito-1998), and the envelope, NS3 and NS5 genes of the Koutango virus. Phylogenetic analyses including all available full-length sequences showed that: (1) Koutango virus is a distant variant of WNV; (2) the three characterized strains belong to lineage 1, clade 1a; (3) the Tunisian strain roots the lineage of viruses introduced in North America. We established that currently available partial envelope sequences do not generate reliable phylogenies. Accordingly, establishing a large WNV sequence database is pivotal for the understanding of spatial and temporal epidemiology of this virus. For rapid completion of that purpose, colinearized E-NS3-NS5 gene sequences were shown to constitute a valuable surrogate for complete sequences

76 FR 24465 - Pacific Gas and Electric Company

Science.gov (United States)

2011-05-02

... Electric Company Notice of Application Tendered for Filing With the Commission and Establishing Procedural... Gas and Electric Company. e. Name of Project: Drum-Spaulding Project. f. Location: The west slope of..., Pacific Gas and Electric Company, P.O. Box 770000, San Francisco, CA 94177-0001, (415) 973-4481, or e-mail...

Description of a new species of Petrolisthes in the Indo-West Pacific with a redefinition of P.hastatus Stimpson, 1858 and resurrection of P.inermis (Heller, 1862) (Crustacea, Anomura, Porcellanidae).

Science.gov (United States)

Werding, Bernd; Hiller, Alexandra

2015-01-01

The porcellanid crab Petrolistheshastatus Stimpson, 1858, has been traditionally viewed as a highly variable species with a wide distribution in the West Pacific. For more than a century there has been taxonomic confusion of this species with morphologically similar taxa, some of which were synonymized with Stimpson's taxon. We redefine Petrolistheshastatus, resurrect Petrolisthesinermis as a valid species, discuss the status of Petrolisthestenkatei De Man, 1893, and describe a new species as Petrolistheselegantissimus from Indonesia.

Evolution of dissolved and particulate chromophoric materials during the VAHINE mesocosm experiment in the New Caledonian coral lagoon (South West Pacific)

Science.gov (United States)

Tedetti, M.; Marie, L.; Röttgers, R.; Rodier, M.; Van Wambeke, F.; Helias, S.; Caffin, M.; Cornet-Barthaux, V.; Dupouy, C.

2015-10-01

In the framework of the VAHINE project, we investigated the spectral characteristics and the variability of dissolved and particulate chromophoric materials throughout a 23 day mesocosm experiment conducted in the South West Pacific at the exit of the New Caledonian coral lagoon (22°29.073 S-166°26.905 E) from 13 January to 4 February 2013. Samples were collected in a mesocosm fertilized with phosphorus at 1, 6 and 12 m depth and in the surrounding waters. Light absorption coefficients of chromophoric dissolved organic matter (CDOM) (ag(λ)), particulate matter (ap(λ)) and CDOM + particulate matter (ag+p(λ)) were measured using a point-source integrating-cavity absorption meter (PSICAM), while fluorescent DOM (FDOM) components were determined from excitation-emission matrices (EEMs) combined with parallel factor analysis (PARAFAC). The evolutions of ag(λ), ap(λ) and ag+p(λ) in the mesocosm were similar to those of total chlorophyll a concentration, Synechococcus spp. and picoeukaryote abundances, bacterial production, particulate organic nitrogen and total organic carbon concentrations, with roughly a decrease from the beginning of the experiment to days 9-10, and an increase from days 9-10 to the end of the experiment. In the surrounding waters, the same trend was observed but the increase was much less pronounced, emphasizing the effect of the phosphorus fertilization on the mesocosm's plankton community. Correlations suggested that both Synechococcus cyanobacteria and heterotrophic bacteria were strongly involved in the production of CDOM and absorption of particulate matter. The increase in phytoplankton activities during the second part of the experiment led to a higher contribution of particulate material in the absorption budget at 442 nm. The three FDOM components identified (tryptophan-, tyrosine- and UVC humic-like fluorophores) did not follow the evolution of CDOM and particulate matter, proving that these were driven by different production

Malaria survey and malaria control detachments in the South-West Pacific Area in World War 2.

Science.gov (United States)

Crocker, Denton W

2009-01-01

Malaria among troops in the South-West Pacific Area (SWPA) in World War 2 affected the military effort to the degree that special units were formed to combat it. These malaria survey detachments (MSDs) and malaria control detachments (MCDs) were self-contained and so could move quickly to wherever their services were needed. In SWPA by 25 September 1944 there were 32 MSDs and 65 MCDs. Tables of organization called for 11 enlisted men in MSDs and MCDs, two officers in MSDs and one in MCDs. Detachments served throughout the SWPA. Detailed records of the 31st MSD show that in addition to antimalarial efforts it worked at control of scrub typhus, dengue and venereal disease, at reduction of rat populations and in experimental work involving DDT and schistosomiasis. Specific locations of the 31st MSD were New Guinea (3 sites), Morotai, Leyte, Mindoro, Okinawa and Japan. The detachment served overseas for 21 months. Experience in combating malaria in SWPA in World War 2 points to the need for better and continuous training of both medical and line officers in malaria prevention and control.

NGA-West2 Research Project

Science.gov (United States)

Bozorgnia, Yousef; Abrahamson, Norman A.; Al Atik, Linda; Ancheta, Timothy D.; Atkinson, Gail M.; Baker, Jack W.; Baltay, Annemarie S.; Boore, David M.; Campbell, Kenneth W.; Chiou, Brian S.J.; Darragh, Robert B.; Day, Steve; Donahue, Jennifer; Graves, Robert W.; Gregor, Nick; Hanks, Thomas C.; Idriss, I. M.; Kamai, Ronnie; Kishida, Tadahiro; Kottke, Albert; Mahin, Stephen A.; Rezaeian, Sanaz; Rowshandel, Badie; Seyhan, Emel; Shahi, Shrey; Shantz, Tom; Silva, Walter; Spudich, Paul A.; Stewart, Jonathan P.; Watson-Lamprey, Jennie; Wooddell, Kathryn; Youngs, Robert

2014-01-01

The NGA-West2 project is a large multidisciplinary, multi-year research program on the Next Generation Attenuation (NGA) models for shallow crustal earthquakes in active tectonic regions. The research project has been coordinated by the Pacific Earthquake Engineering Research Center (PEER), with extensive technical interactions among many individuals and organizations. NGA-West2 addresses several key issues in ground-motion seismic hazard, including updating the NGA database for a magnitude range of 3.0–7.9; updating NGA ground-motion prediction equations (GMPEs) for the “average” horizontal component; scaling response spectra for damping values other than 5%; quantifying the effects of directivity and directionality for horizontal ground motion; resolving discrepancies between the NGA and the National Earthquake Hazards Reduction Program (NEHRP) site amplification factors; analysis of epistemic uncertainty for NGA GMPEs; and developing GMPEs for vertical ground motion. This paper presents an overview of the NGA-West2 research program and its subprojects.

Isolation and characterization of Staphylococcus sp. strain NBRIEAG-8 from arsenic contaminated site of West Bengal

Energy Technology Data Exchange (ETDEWEB)

Srivastava, Shubhi; Singh, Namrata; Singh, Nandita [CSIR - National Botanical Research Institute, Lucknow, UP (India). Eco-auditing Lab.; Verma, Praveen C.; Singh, Ankit; Mishra, Manisha [CSIR - National Botanical Research Institute, Lucknow, UP (India). Plant Molecular Biology and Genetic Engineering; Sharma, Neeta [Lucknow Univ., UP (India). Plant Pathology Lab.

2012-09-15

Arsenic contaminated rhizospheric soils of West Bengal, India were sampled for arsenic resistant bacteria that could transform different arsenic forms. Staphylococcus sp. NBRIEAG-8 was identified by16S rDNA ribotyping, which was capable of growing at 30,000 mg l{sup -1} arsenate [As(V)] and 1,500 mg l{sup -1} arsenite [As(III)]. This bacterial strain was also characterized for arsenical resistance (ars) genes which may be associated with the high-level resistance in the ecosystems of As-contaminated areas. A comparative proteome analysis was conducted with this strain treated with 1,000 mg l{sup -1} As(V) to identify changes in their protein expression profiles. A 2D gel analysis showed a significant difference in the proteome of arsenic treated and untreated bacterial culture. The change in pH of cultivating growth medium, bacterial growth pattern (kinetics), and uptake of arsenic were also evaluated. After 72 h of incubation, the strain was capable of removing arsenic from the culture medium amended with arsenate and arsenite [12% from As(V) and 9% from As(III)]. The rate of biovolatilization of As(V) was 23% while As(III) was 26%, which was determined indirectly by estimating the sum of arsenic content in bacterial biomass and medium. This study demonstrates that the isolated strain, Staphylococcus sp., is capable for uptake and volatilization of arsenic by expressing ars genes and 8 new upregulated proteins which may have played an important role in reducing arsenic toxicity in bacterial cells and can be used in arsenic bioremediation. (orig.)

Decadal Shift in West China Autumn Precipitation and its Association With Sea Surface Temperature

Science.gov (United States)

Wei, Ting; He, Shengping; Yan, Qing; Dong, Wenjie; Wen, Xiaohang

2018-01-01

West China autumn precipitation (WCAP) is the final stage of the rainy season in mainland China and is characterized as the secondary peak in annual cycle of precipitation in West China. This study reveals that WCAP experienced a significant interdecadal shift around the mid-1980s, with greatly reduced precipitation after this shift. Features related to the decrease in WCAP include the weakening of warm, wet southerlies prevailing from the oceans to inland China, the weakened Eurasian pattern, and the southward displacement of the East Asian jet stream (EAJS). Further analysis indicates that the interdecadal changes in WCAP may be attributed to the interdecadal increasing of sea surface temperature (SST) in the Indo-Pacific warm pool (SSTIOP), North Pacific (SSTNP), and central equatorial Pacific (SSTCEP) after the 1980s. The warmer SSTIOP contributes to a weaker meridional land-sea thermal contrast, which inducts an anomalous local meridional circulation and northerly. The warmer SSTNP stimulates a Rossby wave train that leads to weakened West Pacific subtropical high and accompanying cyclonic circulation anomaly, hindering the transport of water vapor inland from the oceans. The increased SSTCEP leads to the southward displacement of the EAJS and its secondary circulation, generating an anomalous descending branch and reduced WCAP. Numerical simulations further support the conclusions derived from the diagnostic analysis that the decadal warming of the SSTIOP, SSTNP, and SSTCEP synergistically contributes to the reduction of WCAP after the 1980s.

Air-sea interaction in the tropical Pacific Ocean

Science.gov (United States)

Allison, L. J.; Steranka, J.; Holub, R. J.; Hansen, J.; Godshall, F. A.; Prabhakara, C.

1972-01-01

Charts of 3-month sea surface temperature (SST) anomalies in the eastern tropical Pacific Ocean were produced for the period 1949 to 1970. The anomalies along the United States and South American west coasts and in the eastern tropical Pacific appeared to be oscillating in phase during this period. Similarly, the satellite-derived cloudiness for each of four quadrants of the Pacific Ocean (130 deg E to 100 deg W, 30 deg N to 25 deg S) appeared to be oscillating in phase. In addition, a global tropical cloudiness oscillation from 30 deg N to 30 deg S was noted from 1965 to 1970, by using monthly satellite television nephanalyses. The SST anomalies were found to have a good degree of correlation both positive and negative with the following monthly geophysical parameters: (1) satellite-derived cloudiness, (2) strength of the North and South Pacific semipermanent anticyclones, (3) tropical Pacific island rainfall, and (4) Darwin surface pressure. Several strong direct local and crossequatorial relationships were noted. In particular, the high degree of correlation between the tropical island rainfall and the SST anomalies (r = +0.93) permitted the derivation of SST's for the tropical Pacific back to 1905. The close occurrence of cold tropical SST and North Pacific 700-mb positive height anomalies with central United States drought conditions was noted.

Thermoluminescence dating in the South-West Pacific region

International Nuclear Information System (INIS)

Prescott, J.R.

1982-01-01

The archaeometry laboratory of the University of Adelaide has undertaken a variety of dating projects for archaeologists in the region. For example, a survey of Pacific Island pottery has shown that themoluminescence dating is likely to be severely limited in usefulness on islands remote from the continental shelf i.e., the andesitic island arcs and oceanic islands. On the mainland of Australia, we have dated prehistoric campsites using ovenstones from fireplaces and have compared C-14 ages with themoluminescent ages. Where there is a close stratigraphic association of the C-14 and TL materials, there is good agreement between the two methods. (author)

Comparative Analysis of the Pattern of Population Genetic Diversity in Three Indo-West Pacific Rhizophora Mangrove Species.

Science.gov (United States)

Yan, Yu-Bin; Duke, Norm C; Sun, Mei

2016-01-01

Rhizophora species are the most widely distributed mangrove trees in the Indo-West Pacific (IWP) region. Comparative studies of these species with shared life history traits can help identify evolutionary factors that have played most important roles in determining genetic diversity within and between populations in ocean-current dispersed mangrove tree species. We sampled 935 individuals from 54 natural populations for genotyping with 13 microsatellite markers to investigate the level of genetic variation, population structure, and gene flow on a broad geographic scale in Rhizophora apiculata, Rhizophora mucronata , and Rhizophora stylosa across the IWP region. In contrast to the pattern expected of long-lived woody plants with predominant wind-pollination, water-dispersed seeds and wide geographic range, genetic variation within populations was generally low in all the three species, especially in those peripheral populations from geographic range limits. Although the large water-buoyant propagules of Rhizophora have capacity for long distance dispersal, such events might be rare in reality, as reflected by the low level of gene flow and high genetic differentiation between most of population pairs within each species. Phylogeographic separation of Australian and Pacific island populations from SE Asian lineages previously revealed with DNA sequence data was still detectable in R. apiculata based on genetic distances, but this pattern of disjunction was not always evident in R. mucronata and R. stylosa , suggesting that fast-evolving molecular markers could be more suitable for detecting contemporary genetic structure but not deep evolutionary divergence caused by historical vicariance. Given that mangrove species generally have small effective population sizes, we conclude that genetic drift coupled with limited gene flow have played a dominant role in producing the current pattern of population genetic diversity in the IWP Rhizophora species, overshadowing the

West Coast Estuaries for Groundfish Essential Fish Habitat (EFH) Environmental Impact Statement

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Pacific States Marine Fisheries Commission — These data depict the boundaries of estuaries along the West Coast of the United States. The estuary boundaries are delineated according to the U.S. Fish and...

Coastal Pacific Doctor Associates: Implementation of a Purchased System

Science.gov (United States)

Schwieger, Dana; McDonald, Michael

2015-01-01

Coastal Pacific Doctor Associates (CPDA) is a multi-physician medical practice located along the west coast. CPDA decided to replace their inadequate and outdated medical office system during a time of tremendous restructuring in the medical software industry. In their impatience, CPDA chose an electronic medical record (EMR) and practice…

Factors affecting finite strain estimation in low-grade, low-strain clastic rocks

Science.gov (United States)

Pastor-Galán, Daniel; Gutiérrez-Alonso, Gabriel; Meere, Patrick A.; Mulchrone, Kieran F.

2009-12-01

The computer strain analysis methods SAPE, MRL and DTNNM have permitted the characterization of finite strain in two different regions with contrasting geodynamic scenarios; (1) the Talas Ala Tau (Tien Shan, Kyrgyzs Republic) and (2) the Somiedo Nappe and Narcea Antiform (Cantabrian to West Asturian-Leonese Zone boundary, Variscan Belt, NW of Iberia). The performed analyses have revealed low-strain values and the regional strain trend in both studied areas. This study also investigates the relationship between lithology (grain size and percentage of matrix) and strain estimates the two methodologies used. The results show that these methods are comparable and the absence of significant finite strain lithological control in rocks deformed under low metamorphic and low-strain conditions.

A new species of Labidocera (Copepoda, Calanoida, Pontellidae) collected from Okinawa, southwestern Japan, with establishment of five Indo-West Pacific species groups in the L.detruncata species complex.

Science.gov (United States)

Hirabayashi, Takeshi; Ohtsuka, Susumu

2014-01-01

Labidocerachuraumi sp. n. is described from Okinawa, southwestern Japan. The female of the new species differs from other congeners in genital compound somite with right postero-lateral and left antero-lateral processes. The male is distinguished from other congeners by the structure of the fifth leg. This new species is assigned to a newly proposed species group, the Labidoceramadurae species group, within the Labidoceradetruncata species complex. In this species complex five Indo-West Pacific species groups are recognized (cervi, detruncata, gangetica, madurae, and pavo) and defined on the basis of difference in sexual dimorphism.

Seussapex, a new genus of lecanicephalidean tapeworm (Platyhelminthes: Cestoda) from the stingray genus Himantura (Myliobatiformes: Dasyatidae) in the Indo-West Pacific with investigation of mode of attachment.

Science.gov (United States)

Jensen, Kirsten; Russell, Shelbi L

2014-06-01

A new lecanicephalidean genus, Seussapex gen. n., is erected for specimens collected from stingrays from the Indo-West Pacific resembling the little known species Tenia [sic] narinari MacCallum, 1917 from the spotted eagle ray, Aetobatus narinari (Euphrasen). Members of this new genus are unique in their possession of a multi-tiered apical structure comprising a bipartite apical modification of the scolex proper, and an externally bipartite apical organ with anterior and posterior glandular compartments internally. The appearance of the scolex varies dramatically depending on state of protrusion and/or evagination of these different parts which appear to be able to function independently. Seussapex karybares sp. n. parasitizing Himantura uarnak 2 (sensu Naylor et al., 2012) in northern Australia is described as the type species and Tenia [sic] narinari is transferred to the new genus. The two species differ in scolex length and width of the posterior dome-shaped portion of the apical organ. Histological sections of scoleces stained using the periodic acid-Schiff(PAS) reaction showed the surface of the anterior part of the apical organ and the anterior glandular compartment to stain PAS positive, suggesting a chemical mode of attachment to the host's intestinal mucosal surface. Extensive collecting efforts of stingrays in the Indo-West Pacific shows Seussapex gen. n. to be restricted to species of Himantura Miller et Henle and suggests additional diversity in this group of hosts. In addition, the host identity of Seussapex narinari (MacCallum, 1917) comb. n. is called into question.

Description of a new species of Petrolisthes in the Indo-West Pacific with a redefinition of P. hastatus Stimpson, 1858 and resurrection of P. inermis (Heller, 1862 (Crustacea, Anomura, Porcellanidae

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Bernd Werding

2015-08-01

Full Text Available The porcellanid crab Petrolisthes hastatus Stimpson, 1858, has been traditionally viewed as a highly variable species with a wide distribution in the West Pacific. For more than a century there has been taxonomic confusion of this species with morphologically similar taxa, some of which were synonymized with Stimpson’s taxon. We redefine P. hastatus, resurrect P. inermis as a valid species, discuss the status of P. tenkatei De Man, 1893, and describe a new species as P. elegantissimus from Indonesia.

Indo-Pacific ENSO modes in a double-basin Zebiak-Cane model

Science.gov (United States)

Wieners, Claudia; de Ruijter, Will; Dijkstra, Henk

2016-04-01

We study Indo-Pacific interactions on ENSO timescales in a double-basin version of the Zebiak-Cane ENSO model, employing both time integrations and bifurcation analysis (continuation methods). The model contains two oceans (the Indian and Pacific Ocean) separated by a meridional wall. Interaction between the basins is possible via the atmosphere overlaying both basins. We focus on the effect of the Indian Ocean (both its mean state and its variability) on ENSO stability. In addition, inspired by analysis of observational data (Wieners et al, Coherent tropical Indo-Pacific interannual climate variability, in review), we investigate the effect of state-dependent atmospheric noise. Preliminary results include the following: 1) The background state of the Indian Ocean stabilises the Pacific ENSO (i.e. the Hopf bifurcation is shifted to higher values of the SST-atmosphere coupling), 2) the West Pacific cooling (warming) co-occurring with El Niño (La Niña) is essential to simulate the phase relations between Pacific and Indian SST anomalies, 3) a non-linear atmosphere is needed to simulate the effect of the Indian Ocean variability onto the Pacific ENSO that is suggested by observations.

Varied representation of the West Pacific pattern in multiple dynamical seasonal predictions of APCC-MME

Science.gov (United States)

Lee, Yun-Young

2017-04-01

West Pacific (WP) teleconnection pattern is one of the well-known primary modes of boreal winter low-frequency variability (LFV) resolved in 500 hPa geopotential height and its phase and amplitude strongly influence regional weather conditions including temperature and rainfall extremes [Baxter and Nigam, 2015; Hsu and Wallace, 1985; Linkin and Nigam, 2008; Mo and Livezey, 1986; Thompson and Wallace, 1998; Wallace and Gutzler, 1981]. This study primary aims to evaluate individual 11 GCMs seasonal hindcasts employed as members of multi-model ensemble (MME) produced in APEC Climate Center (APCC) in representing WP. For the extensive and comprehensive evaluation, this study applied seven verification metrics in three scopes: (a) temporal representation of observed indices, (b) spatial mode separation in the Northern Hemisphere (NH), and (c) regional mode isolated in the preset longitudinal domain. Verification results display quite large inter-model spread. Some models mimic observed index variability while others display large bias of index variability compared to climatology. Basic north-south dipole pattern is mostly well reproduced in both rotated and unrotated loading modes. However, each individual seasonal forecast model exhibits slightly different behavior (e.g. amplification/weakening, zonal and meridional shift, downstream extension and so forth) in representing spatial structure of WP. When taking all 7 metrics into account, one Europe (CMCC) model, one Oceania (POAMA) model and two North America (NASA and NCEP) models are classified as relatively good performers while PNU is classified as a matchless poor performer out of 11. Least WP representing skill of PNU is sort of consistent with the largest bias of NH total variability. This study further tries to examine winter mean biases of individual models and figure out how mean bias is linked to WP representation in model world. Model bias of winter climatology is investigated focusing on six large scale

A 3-D Model Analysis of The Impact of Asian Anthropogenic Emissions on the Sulfur Cycle Over the Pacific Ocean

Science.gov (United States)

Chin, Mian; Thornton, Donald; Bandy, Alan; Huebert, Barry; Einaudi, Franco (Technical Monitor)

2000-01-01

The impact of anthropogenic activities on the SO2 and sulfate aerosol levels over the Pacific region is examined in the Georgia Tech/Goddard Global Ozone Chemistry Aerosol Radiation and Transport (GOCART) model. We focus on the analysis of the data from the NASA Pacific Exploratory Missions (PEM) over the western North Pacific and the tropical Pacific. These missions include PEM-West A in September-October 1991, when the Asian outflow was at the minimum but the upper atmosphere was heavily influenced by the Pinatubo volcanic eruption, and PEM-West B in March-April 1994 when the Asian outflow was at the maximum, and PEM-Tropics A in August-September at a region relatively free of direct anthropogenic influences. Specifically, we will examine the relative importance of anthropogenic, volcanic and biogenic sources to the SO2 and sulfate concentrations over the Pacific, and quantify the processes controlling the distributions of SO2 and sulfate in both the boundary layer and the free troposphere. We will also assess the global impact of SO2 emission in Asia on the sulfate aerosol loading.

A Review of Vaccine Approaches for West Nile Virus

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Konstantin G. Kousoulas

2013-09-01

Full Text Available The West Nile virus (WNC first appeared in North America in 1999. The North American lineages of WNV were characterized by the presence of neuroinvasive and neurovirulent strains causing disease and death in humans, birds and horses. The 2012 WNV season in the United States saw a massive spike in the number of neuroinvasive cases and deaths similar to what was seen in the 2002–2003 season, according to the West Nile virus disease cases and deaths reported to the CDC by year and clinical presentation, 1999–2012, by ArboNET (Arboviral Diseases Branch, Centers for Disease Control and Prevention. In addition, the establishment and recent spread of lineage II WNV virus strains into Western Europe and the presence of neurovirulent and neuroinvasive strains among them is a cause of major concern. This review discusses the advances in the development of vaccines and biologicals to combat human and veterinary West Nile disease.

100% of the World Ocean Floor Mapped by 2030 - Contribution of the South and West Pacific Regional Data Assembly and Coordination Centre to the Seabed 2030 Initiative

Science.gov (United States)

Lamarche, G.; Neil, H.; Stagpoole, V. M.; Greenland, A.; Mackay, K.; Black, J.; Griffin, E.

2017-12-01

The Seabed 2030 SaWPac Centre (South and West Pacific Ocean Regional Data Assembly and Coordination Centre) has been formed to generate new high resolution ocean floor maps of the western and southern Pacific Ocean. The centre is part of the joint Nippon Foundation and the General Bathymetric Chart of the Oceans (GEBCO) initiative to produce a definitive map of the World Ocean floor by 2030, empowering the world to make policy decisions, use the ocean sustainability and undertake scientific research based on detailed bathymetric information of the Earth's seabed. The SaWPac Centre is based at NIWA Wellington (New Zealand) and includes a collaborative partnership with GNS Science and Land Information New Zealand. It is responsible for the region from South America to Australia, north of latitude 50°S to 10° north of the Equator and the western part of the Northern Pacific Ocean to Russia. The region includes the world's deepest trenches and also covers some of the remotest oceans where bathymetric data form existing ship tracks is spaced up to 100 km apart. The challenge for the SaWPac Centre is to collate and combine all the available bathymetric data from the numerous nations that have surveyed in the region. The centre will also promote efforts to collect new data and contribute to map products generated by the Seabed 2030 global mapping project.

A skilful prediction scheme for West China autumn precipitation

Science.gov (United States)

Wei, Ting; Song, Wenling; Dong, Wenjie; Ke, Zongjian; Sun, Linhai; Wen, Xiaohang

2018-01-01

West China is one of the country's largest precipitation centres in autumn. This region's agriculture and people are highly vulnerable to the variability in the autumn rain. This study documents that the water vapour for West China autumn precipitation (WCAP) is from the Bay of Bengal, the South China Sea and the Western Pacific. A strong convergence of the three water vapour transports (WVTs) and their encounter with the cold air from the northern trough over Lake Barkersh-Lake Baikal result in the intense WCAP. Three predictors in the preceding spring or summer are identified for the interannual variability of WCAP: (1) sea surface temperature in the Indo-Pacific warm pool in summer, (2) soil moisture from the Hexi Corridor to the Hetao Plain in summer and (3) snow cover extent over East Europe and West Siberian in spring. The cold SSTAs contribute to an abnormal regional meridional circulation and intensified WVTs. The wet soil results in greater air humidity and anomalous southerly emerging over East Asia. Reduced snow cover stimulates a Rossby wave train that weakens the cold air, favouring autumn rainfall in West China. The three predictors, which demonstrate the influences of air-sea interaction, land surface processes and the cryosphere on the WCAP, have clear physical significance and are independent with each other. We then develop a new statistical prediction model with these predictors and the multilinear regression analysis method. The predicted and observed WCAP shows high correlation coefficients of 0.63 and 0.51 using cross-validation tests and independent hindcasts, respectively.

The genus Pirenella Gray, 1847 (= Cerithideopsilla Thiele, 1929) (Gastropoda: Potamididae) in the Indo-West Pacific region and Mediterranean Sea.

Science.gov (United States)

Reid, David G; Ozawa, Tomowo

2016-02-05

Members of the genus Pirenella are abundant inhabitants of intertidal sedimentary shores, often found in association with mangroves, on the continental margins of the western Pacific and Indian Oceans, and eastern Mediterranean Sea. Until recently, four morphological species were recognised in the tropical Indo-West Pacific region and classified in the genus Cerithideopsilla, while another species occupying the Mediterranean and Indian Ocean was classified as Pirenella conica. Molecular phylogenetic analysis has demonstrated that all these species are congeneric and here it is shown that the valid name for the genus is Pirenella. A recently published molecular study recognised a total of 16 species and the present work is a systematic account of these species. Of the 16, nine are described as new. Other significant nomenclatural acts are: fixation of type species of Pirenella as Pirenella mammillata J.E. Gray, 1847; designation of neotypes for Cerithium alatum Philippi, 1849, Cerithium microptera Kiener, 1841, Cerithium conicum Blainville, 1829, Pirenella mammillata J.E. Gray, 1847 and Murex cingulatus Gmelin, 1791; designation of lectotype for Cerithium retiferum G.B. Sowerby II, 1855. The species accounts include full synonymies, detailed descriptions of shells (based on 831 museum samples), distribution records and maps, reviews of life history, of habitat and of ecology, and some images of radulae. Details of shell sculpture are adequate for the diagnosis of most species. Distorted shells are common in some populations and are suggested to represent parasitised individuals. Some species are pests of fishponds in Southeast Asia and P. conica is the intermediate host of a trematode responsible for the human disease heterophyiasis, while others are threatened by habitat destruction.

Molecular evidence for long-distance colonization in an Indo-Pacific seahorse lineage

Digital Repository Service at National Institute of Oceanography (India)

Teske, P.R.; Hamilton, H.; Palsboll, P.J.; Choo, C.K.; Gabr, H.; Lourie, S.A.; Santos, M.; Sreepada, R.A.; Cherry, M.I.; Matthee, C.A.

Island, Mozambique 2 Pemba, Tanzania* 1 H. kuda Tayabas Bay, Quezon, the Philippines 35(+3) (West Pacific lineage) Fiji 10 Taiwan* 1 H. fuscus Gulf of Suez, Red Sea, Egypt* 35 H. capensis Knysna Estuary, South Africa 35 Outgroup H. reidi Gulf of Mexico..., Mexico* 1 H. ingens East Pacific coast, Mexico* 1 H. hilonis Hawaii* 1 H. capensis (South Africa) H. kuda (South Africa) H. kuda (Mozambique) H. kuda (Tanzania) H. kuda (western India) H. kuda (southeastern India) H. kuda (Malaysia) H. kuda (Lombok) H...

A new species of Labidocera (Copepoda, Calanoida, Pontellidae collected from Okinawa, southwestern Japan, with establishment of five Indo-West Pacific species groups in the L. detruncata species complex

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Takeshi Hirabayashi

2014-10-01

Full Text Available Labidocera churaumi sp. n. is described from Okinawa, southwestern Japan. The female of the new species differs from other congeners in genital compound somite with right postero-lateral and left antero-lateral processes. The male is distinguished from other congeners by the structure of the fifth leg. This new species is assigned to a newly proposed species group, the L. madurae species group, within the L. detruncata species complex. In this species complex five Indo-West Pacific species groups are recognized (cervi, detruncata, gangetica, madurae, and pavo and defined on the basis of difference in sexual dimorphism.

A new species of Labidocera (Copepoda, Calanoida, Pontellidae) collected from Okinawa, southwestern Japan, with establishment of five Indo-West Pacific species groups in the L. detruncata species complex

Science.gov (United States)

Hirabayashi, Takeshi; Ohtsuka, Susumu

2014-01-01

Abstract Labidocera churaumi sp. n. is described from Okinawa, southwestern Japan. The female of the new species differs from other congeners in genital compound somite with right postero-lateral and left antero-lateral processes. The male is distinguished from other congeners by the structure of the fifth leg. This new species is assigned to a newly proposed species group, the Labidocera madurae species group, within the Labidocera detruncata species complex. In this species complex five Indo-West Pacific species groups are recognized (cervi, detruncata, gangetica, madurae, and pavo) and defined on the basis of difference in sexual dimorphism. PMID:25349514

Insight into the Pacific Sea Surface Temperature- North American Hydroclimate Connection from an Eastern Tropical North Pacific Coral Record

Science.gov (United States)

Sanchez, S. C.; Charles, C. D.; Carriquiry, J. D.

2015-12-01

The last few years of record-breaking climate anomalies across North America--a resilient atmospheric ridge and extreme drought over the West Coast, and severe winters across the Midwest and East Coast regions--have been linked to anomalous Pacific sea surface temperatures (Seager et al. 2014, Wang et al. 2014, Hartmann 2015). The synoptic associations prompt important questions on the relation between these unusual phenomena and extreme expressions of known Pacific decadal modes, such as the North Pacific Gyre Oscillation (NPGO). These questions motivate our pursuit to document multiple realizations of decadal variability in the Pacific-North American region through periods of varied radiative forcing. Here we introduce a 178 year, seasonally resolved Porites coral record from Clarion Island (18N, 115W), the westernmost island of the Revillagigedo Archipelago, a region both highly influenced by NPGO SST and SSS variability and critical for NPGO tropical-extratropical communication via the Seasonal Footprinting Mechanism (Vimont et al. 2003). When coupled with tree ring records from the western United States (Griffin and Anchukaitis 2014, MacDonald and Case 2005) and coral records from the central tropical Pacific (Cobb et al. 2001), the δ18O signal from the Clarion coral offers an extended framework of coherent continental hydroclimate and oceanic variability across the Pacific basin beyond the instrumental record. Over the last 200 years, we find clear commonality in the timing, magnitude and spatial expression of variability (illustrated through the NADA Atlas, Cook et al. 2004) amongst the proxy records. The strong relationship between Northeastern Pacific Clarion and the Central Pacific Palmyra record with the North American hydroclimate records can be viewed within the mechanistic framework of the NPGO; this framework is then explored over the last millennium across intervals of varied radiative forcing.

Characterization of genome-wide microsatellite markers in rabbitfishes, an important resource for artisanal fisheries in the Indo-West Pacific.

Science.gov (United States)

Kiper, Ilkser Erdem; Bloomer, Paulette; Borsa, Philippe; Hoareau, Thierry Bernard

2018-02-01

Rabbitfishes are reef-associated fishes that support local fisheries throughout the Indo-West Pacific region. Sound management of the resource requires the development of molecular tools for appropriate stock delimitation of the different species in the family. Microsatellite markers were developed for the cordonnier, Siganus sutor, and their potential for cross-amplification was investigated in 12 congeneric species. A library of 792 repeat-containing sequences was built. Nineteen sets of newly developed primers, and 14 universal finfish microsatellites were tested in S. sutor. Amplification success of the 19 Siganus-specific markers ranged from 32 to 79% in the 12 other Siganus species, slightly decreasing when the genetic distance of the target species to S. sutor increased. Seventeen of these markers were polymorphic in S. sutor and were further assayed in S. luridus, S. rivulatus, and S. spinus, of which respectively 9, 10 and 8 were polymorphic. Statistical power analysis and an analysis of molecular variance showed that subtle genetic differentiation can be detected using these markers, highlighting their utility for the study of genetic diversity and population genetic structure in rabbitfishes.

Two new species and new records of Microprosthema Stimpson, 1860 (Crustacea: Decapoda: Stenopodidea: Spongicolidae) from the Indo-West Pacific.

Science.gov (United States)

Saito, Tomomi; Anker, Arthur

2014-08-28

Two new species of the spongicolid shrimp genus Microprosthema Stimpson, 1860 are described and illustrated on the basis of material collected recently in Australia and Japan. Type specimens of Microprosthema ningaloo sp. nov. were collected on Ningaloo Reef, Western Australia, whereas type specimens of Microprosthema pallidum sp. nov. were collected on a coral reef off Ishigaki Island, Ryukyu Archipelago, southern Japan. Microprosthema ningaloo sp. nov. and M. pallidum sp. nov. differ from all other species of the genus by a combination of morphological characters, including the gill-exopod formulae, and by their diagnostic colour patterns. This study increases the total number of species described in the genus Microprosthema to 16, nine of them in the Indo-West Pacific. In addition, new records are provided for M. lubricum Saito & Okuno, 2011 (Guam), M. plumicorne (Richters, 1880) (Red Sea, Mariana and Marshall Islands, French Polynesia), M. scabricaudatum (Richters, 1880) (Red Sea, Glorieuses and Tuamotu Islands), and M. validum Stimpson, 1860 (Red Sea, Madagascar, Singapore, French Polynesia), significantly extending their previously known distribution ranges. 

India: Asia-Pacific energy series country report

Energy Technology Data Exchange (ETDEWEB)

Gazdar, M.N.

1992-03-01

As part of our continuing assessment of Asia-Pacific energy markets, the Resources Programs of the East-West Center series of country studies that discuss in detail the structure of the energy sector. To date, our reports to the US Department of Energy, Assistant Secretary for International Affairs and Energy Emergencies, have covered Australia, China, India, Indonesia, Japan, Malaysia, New Zealand, Pakistan, the Philippines, Singapore, South Korea, Taiwan, and Thailand. The country studies provide an overview of the economic and political situation in the various countries. We have highlighted petroleum and gas issues in the country studies and have attempted to show the foreign trade implications of oil and gas trade. To the greatest extent possible, we have provided the latest available statistics. Staff members have traveled extensively in-and at times have lived in-the countries under review and have held discussions with senior policymakers in government and industry. Thus, these reports provide not only information but also the latest thinking on energy issues in the various countries. Over the next few years these country studies can be updated and will provide a continuous, long-term source of energy sector analysis for the Asia-Pacific region. This India Asia-Pacific Energy Series Country Report is the follow-on to a study by Victor Lobo, Energy in India: The Oil Sector, which was published by the East-West Center in December 1989. The study focused on the petroleum industry, particularly refining, infrastructure, marketing and distribution, specifications of products, demand structure and pricing. This current study, must be seen as a supplement to our 1989 study and, as such, does not cover the petroleum sector in depth.

India: Asia-Pacific energy series country report

International Nuclear Information System (INIS)

Gazdar, M.N.

1992-03-01

As part of our continuing assessment of Asia-Pacific energy markets, the Resources Programs of the East-West Center series of country studies that discuss in detail the structure of the energy sector. To date, our reports to the US Department of Energy, Assistant Secretary for International Affairs and Energy Emergencies, have covered Australia, China, India, Indonesia, Japan, Malaysia, New Zealand, Pakistan, the Philippines, Singapore, South Korea, Taiwan, and Thailand. The country studies provide an overview of the economic and political situation in the various countries. We have highlighted petroleum and gas issues in the country studies and have attempted to show the foreign trade implications of oil and gas trade. To the greatest extent possible, we have provided the latest available statistics. Staff members have traveled extensively in-and at times have lived in-the countries under review and have held discussions with senior policymakers in government and industry. Thus, these reports provide not only information but also the latest thinking on energy issues in the various countries. Over the next few years these country studies can be updated and will provide a continuous, long-term source of energy sector analysis for the Asia-Pacific region. This India Asia-Pacific Energy Series Country Report is the follow-on to a study by Victor Lobo, Energy in India: The Oil Sector, which was published by the East-West Center in December 1989. The study focused on the petroleum industry, particularly refining, infrastructure, marketing and distribution, specifications of products, demand structure and pricing. This current study, must be seen as a supplement to our 1989 study and, as such, does not cover the petroleum sector in depth

Pacific Northern Gas Ltd. annual report 2002

International Nuclear Information System (INIS)

2003-01-01

Pacific Northern Gas Ltd. operates in west-central and northeast British Columbia. The company delivers natural gas to customers through a transmission pipeline connected to Duke Energy system near Summit Lake, British Columbia. This report states that in 2002 financial results were disappointing. The company's net income in 2002 was lower than it was in 2001 ($4.6 million versus $5.7 million). In December 2002, Pacific Northern Gas Ltd. completed $15 million in financing. Additions to property, plant and equipment reached a total of $6 million in 2002. A new, seven-year contract with Methanex Corporation was successfully negotiated. Pacific Northern Gas Ltd. filed revenue requirements applications with the British Columbia Utilities Commission, seeking the Commission's approval of rates for 2003 and requesting approval of a new deferral account in all divisions. A settlement of the western system 2003 revenue requirements application was negotiated with its customers. The annual report presented a highlight of all activities, including corporate governance and management discussions and analysis. Consolidated financial statements were also provided. tabs

Comparative Analysis of the Pattern of Population Genetic Diversity in Three Indo-West Pacific Rhizophora Mangrove Species

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Yu-Bin Yan

2016-09-01

Full Text Available Rhizophora species are the most widely distributed mangrove trees in the Indo-West Pacific (IWP region. Comparative studies of these species with shared life history traits can help identify evolutionary factors that have played most important roles in determining genetic diversity within and between populations in ocean-current dispersed mangrove tree species. We sampled 935 individuals from 54 natural populations for genotyping with 13 microsatellite markers to investigate the level of genetic variation, population structure, and gene flow on a broad geographic scale in Rhizophora apiculata, R. mucronata, and R. stylosa across the IWP region. In contrast to the pattern expected of long-lived woody plants with predominant wind-pollination, water-dispersed seeds and wide geographic range, genetic variation within populations was generally low in all the three species, especially in those peripheral populations from geographic range limits. Although the large water-buoyant propagules of Rhizophora have capacity for long distance dispersal, such events might be rare in reality, as reflected by the low level of gene flow and high genetic differentiation between most of population pairs within each species. Phylogeographic separation of Australian and Pacific island populations from SE Asian lineages previously revealed with DNA sequence data was still detectable in R. apiculata based on genetic distances, but this pattern of disjunction was not always evident in R. mucronata and R. stylosa, suggesting that fast-evolving molecular markers could be more suitable for detecting contemporary genetic structure but not deep evolutionary divergence caused by historical vicariance. Given that mangrove species generally have small effective population sizes, we conclude that genetic drift coupled with limited gene flow have played a dominant role in producing the current pattern of population genetic diversity in the IWP Rhizophora species, overshadowing the

76 FR 82031 - Public Notice for Waiver of Aeronautical Land-use Assurance; DuPage Airport, West Chicago, IL

Science.gov (United States)

2011-12-29

... retained by the DAA. Parcel A includes portions of Parcels 209A (SOUTH OF THE Union Pacific Railroad, 231 (south of the Union Pacific Railroad) and all of Parcels 217, 218, 219, 220, 221, 314 and 315 as per the... AT THE FOUND CAST IRON MONUMENT MARKING THE WEST QUARTER CORNER OF SAID SECTION 18, PER DOCUMENT NO...

Phenotypic and Genotypic Evaluation of Pseudomonas syringae pv. syringae Strains, Causing Citrus Blast in the West of Mazandaran and the East of Guilan

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S. Sameie-Shirkadeh

2017-01-01

Full Text Available Introduction: P. syringae pv. syringae (P.s.s, the causal agent of blast of citrus trees, is one of the most important plant pathogens in the world. P.s.s is unique among most P. syringae pathovars according to its ability to cause disease in over 180 species of plants in several unrelated genera. Traditionally, Strains of P.s.s are identified on the basis of biochemical and nutritional tests and symptom expression in host plants. Genomic fingerprinting methods based on the polymerase chain reaction (PCR have been applied for identification and classification of plant-associated bacteria to the subspecies level. The objectives of this study were the phenotypic and molecular evaluation of P.s. pv. syringae strains causing citrus blast in the West of Mazandaran and the East of Guilan, and study of genetic diversity of P.s.s isolates of citrus by using ERIC and REP-PCR markers. Materials and Methods: During 2011 to 2012, citrus infected tissues were sampled from different orchards in the West of Mazandaran and the East of Guilan. Bacterial phenotypes were studied based on standard physiological and biochemical tests. Gram reaction was determined by potassium hydroxide solubility test (KOH test. Strains were grown on King'B medium (KB and fluorescent pigment production was evaluated. Levan formation, oxidase reaction, potato soft rot, Arginine dihydrolase and induction of the hypersensitive reaction in tobacco leaves (LOPAT tests, were done as described by Schadd et al. The standard strains of P.s. pv. syringae form IVIA were used as reference strains in this study. Pathogenicity Test was done as described by Yessad et al. Citrus seedlings were maintained in a greenhouse at 20°C. In addition, a PCR-based method was used to confirm the genus and species of bacteria by using bacterial specific primer pair’s designed for a specific gene of syringomycin B. Genetic diversity among the strains, was studied by rep-PCR fingerprinting. Genomic

The Index of Asia-Pacific Regional Integration Effort

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Victor Yifan Ye

2016-06-01

Full Text Available The Asia-Pacific region is not typically seen as one geographic or socio-economic space. Yet, 58 regional economies occupying the space of 28 million square kilometers from Turkey in the West, Russian Federation in the North, French Polynesia in the East and New Zealand in the South belong to the Economic and Social Commission of Asia and the Pacific (ESCAP. This commission provides a forum for member states that "promotes regional cooperation and collective action, assisting countries in building and sustaining shared economic growth and social equity". In 2013, ESCAP's members adopted the Bangkok Declaration to enhance efforts towards deeper regional economic integration. Yet this document neither proposes a concrete modality or modalities of achieving deeper integration, nor provides a sense of distance of individual countries to a "perceived" integrated Asia-Pacific.This paper aims to comprehensively quantify recent integration efforts of economies in the Asia-Pacific region. We provide an "index of integration effort" based on twelve metrics that measure the relative distance of a given economy to the region as an economic entity. Generally, we find that while the region has trended towards becoming integrated in general, both the level of integration and integration effort are inconsistent among Asia-Pacific economies. We discuss potential applications and extensions of the index in developing our perspective of the region's economic and social dynamics.

The Impacts of Amazon Deforestation on Pacific Climate

Science.gov (United States)

Lindsey, Leah

Pacific climate, numerical experiments were performed using the CESM. Amazon deforestation was studied in an idealized world where a single continent was covered in forest and then, in a separate simulation, covered in grassland. Four different sets of simulations were carried out: 1) the baseline idealized set-up with prescribed SST, 2) another with an Andes-like mountain range, 3) a simulation with a slab ocean model rather than prescribed SST, and 4) a simulation repeated with the standard Community Atmosphere Model (CAM4) replaced by the Superparameterized version (SP-CAM). The continent in these simulations was compared to the Amazon, and the ocean to the west of the continent was compared to the eastern Pacific. All of the simulations showed a strong warming of around 3-4°C over the continent going from forest to grassland. A notable decrease in precipitation over land of about 1-3 mm day-1 and increase to the west of the continent of about 1-2 mm day-1 was also observed in most of the simulations. The simulations with the slab ocean model showed enhanced precipitation changes with a corresponding decrease of 2-4 mm day-1 over land and increase of 3-5 mm day-1 west of the continent. Simulations that used the SP-CAM showed very small changes in precipitation, which was likely due to the decreased spin-up time allowed for these simulations. The decrease in the surface roughness and reduction in the evapotranspiration for the simulations with grassland contributed to these changes in surface temperature and precipitation. The conversion of forest to grassland in our experiments imply that deforestation can lead to weakening of the Walker circulation by weakening easterly surface winds and westerly upper tropospheric winds. These findings suggest that large-scale Amazon deforestation is capable of enhancing El Nino conditions.

Design and operating features of the high-level waste vitrification system for the West Valley demonstration project

International Nuclear Information System (INIS)

Siemens, D.H.; Beary, M.M.; Barnes, S.M.; Berger, D.N.; Brouns, R.A.; Chapman, C.C.; Jones, R.M.; Peters, R.D.; Peterson, M.E.

1986-03-01

A liquid-fed joule-heated ceramic melter system is the reference process for immobilization of the high-level liquid waste in the US and several foreign countries. This system has been under development for over ten years at Pacific Northwest Laboratory and other national laboratories operated for the US Department of Energy. Pacific Northwest Laboratory contributed to this research through its Nuclear Waste Treatment Program and used applicable data to design and test melters and related systems using remote handling of simulated radioactive wastes. This report describes the equipment designed in support of the high-level waste vitrification program at West Valley, New York. Pacific Northwest Laboratory worked closely with West Valley Nuclear Services Company to design a liquid-fed ceramic melter, a liquid waste preparation and feed tank and pump, an off-gas treatment scrubber, and an enclosed turntable for positioning the waste canisters. Details of these designs are presented including the rationale for the design features and the alternatives considered

Pathogenicity evaluation of twelve West Nile virus strains belonging to four lineages from five continents in a mouse model: discrimination between three pathogenicity categories.

Science.gov (United States)

Pérez-Ramírez, Elisa; Llorente, Francisco; Del Amo, Javier; Fall, Gamou; Sall, Amadou Alpha; Lubisi, Alison; Lecollinet, Sylvie; Vázquez, Ana; Jiménez-Clavero, Miguel Ángel

2017-04-01

Rodent models have been used extensively to study West Nile virus (WNV) infection because they develop severe neurological symptoms similar to those observed in human WNV neuroinvasive disease. Most of this research has focused on old lineage (L) 1 strains, while information about pathogenicity is lacking for the most recent L1 and L2 strains, as well as for newly defined lineages. In this study, 4-week-old Swiss mice were inoculated with a collection of 12 WNV isolates, comprising 10 old and recent L1 and L2 strains, the putative L6 strain from Malaysia and the proposed L7 strain Koutango (KOU). The intraperitoneal inoculation of 10-fold dilutions of each strain allowed the characterization of the isolates in terms of LD50, median survival times, ID50, replication in neural and extraneural tissues and antibody production. Based on these results, we classified the isolates in three groups: high virulence (all L1a strains, recent L2 strains and KOU), moderate virulence (B956 strain) and low virulence (Kunjin and Malaysian isolates). We determined that the inoculation of a single dose of 1000 p.f.u. would be sufficient to classify WNV strains by pathotype. We confirmed the enhanced virulence of the KOU strain with a high capacity to cause rapid systemic infection. We also corroborated that differences in pathogenicity among strains do not correlate with phylogenetic lineage or geographic origin, and confirmed that recent European and African WNV strains belonging to L1 and L2 are highly virulent and do not differ in their pathotype profile compared to the prototype NY99 strain.

Learning from California and the Pacific Rim

International Nuclear Information System (INIS)

Tussing, A.R.

1993-01-01

Heavy oils are found in 10 of the 14 largest oilfields in Alaska and California. In the US west coast region, petroleum demand is dominated by light transport fuels, and there is a lack of a discrete and conspicuous heavy oil market. The structure and behavior of west coast petroleum markets, and their interactions with crude-oil and petroleum product markets elsewhere on the Pacific Rim are discussed with regard to how the market for growing volumes of western Canadian heavy oils might evolve. An analysis of crude oil prices versus API gravity demonstrates the price penalties on oil of low gravity, high sulfur, and high transport cost. Prices at the high gravity end tend to correlate closely with Asian light crude and unfinished gasoline prices. The heaviest crudes are priced in competition with other chemically similar residual oils for direct fuel use, blending, or refinery feedstock. The biggest component of the west coast heavy oil market is bunker fuel. The market value of heavy crudes in the west coast is thus determined by regional supply and demand for heavy hydrocarbon molecules, whatever the source. The west coast is not a promising market for Canadian heavy crudes, and exports to Asia would have to compete both with residual oils from Asia and the US west coast and with California heavy crudes. US west coast production peaked in 1989 and regional production can be expected to decline further in average gravity. New production from known but undeveloped heavy oil pools near Prudhoe Bay or in the California offshore could be expected to postpone the need for imports to the west coast and to depress prices. A removal of the Alaska crude oil export ban could improve the west coast heavy oil market. 5 refs., 2 figs., 1 tab

Upper ocean heat budget of western-north Pacific using satellite and ship observations

Digital Repository Service at National Institute of Oceanography (India)

Pankajakshan, T.; Sugimori, Y.; Akiyama, M.

Surface layer (0-17~'C isotherm depth) heat balance of a closed rectangular system (the Kuroshio system) in the North-West Pacific has been examined for a period of 10 days (from 16th to 25th, October, 1991), by considering the residual of net...

Relative motions of the Australian, Pacific and Antarctic plates estimated by the Global Positioning System

Science.gov (United States)

Larson, Kristine M.; Freymueller, Jeff

1995-01-01

Global Positioning System (GPS) measurements spanning approximately 3 years have been used to determine velocities for 7 sites on the Australian, Pacific and Antarctic plates. The site velocities agree with both plate model predictions and other space geodetic techniques. We find no evidence for internal deformation of the interior of the Australian plate. Wellington, New Zealand, located in the Australian-Pacific plate boundary zone, moves 20 +/- 5 mm/yr west-southwest relative to the Australian plate. Its velocity lies midway between the predicted velocities of the two plates. Relative Euler vectors for the Australia-Antarctica and Pacific-Antarctica plates agree within one standard deviation with the NUVEL-1A predictions.

Himalayan Strain Accumulation 100 ka Timescales

Science.gov (United States)

Cannon, J. M.; Murphy, M. A.; Liu, Y.

2015-12-01

Crustal scale fault systems and tectonostratigraphic units in the Himalaya can be traced for 2500 km along strike. However regional studies have shown that there is variability in the location and rate of strain accumulation which appears to be driven by Main Himalayan Thrust (MHT) geometry and convergence obliquity. GPS illuminates the modern interseismic strain rate and the historical record of great earthquakes elucidates variations in strain accumulation over 103 years. To connect these patterns with the 106 year structural and thermochronometric geologic record we examine normalized river channel steepness (ksn), a proxy for rock uplift rate, which develops over 104 - 105 years. Here we present a ksn map of the Himalaya and compare it with bedrock geology, precipitation, the historic earthquake record, GPS, seismicity, and seismotectonic models. Our map shows significant along strike changes in the magnitude of channel steepness, the areal extent of swaths of high ksn channels, and their location with respect to the range front. Differences include the juxtaposition of two narrow (30 - 40 km) range parallel belts of high ksn in west Nepal and Bhutan coincident with MHT duplexes and belts of microseismcity, with a single broad (70 km) swath of high ksn and microseismicity in central and eastern Nepal. Separating west and central Nepal a band of low ksn crosses the range coincident with the West Nepal Fault (WNF) and the lowest rate of microseismicity in Nepal. To the west the orogen is obliquely convergent and has less high ksn channels, while the orthogonally convergent region to the east contains the highest concentration of oversteepened channels in the Himalaya supporting the idea that the WNF is a strain partitioning boundary. The syntaxes are characterized by locally high channel steepness surrounded by low to moderate ksn channels consistent with the hypothesis that rapid exhumation within the syntaxes is sustained by an influx of lower crust.

The Global Politics of Gay Rights: The Straining Relations between the West and Africa

Directory of Open Access Journals (Sweden)

Hakeem Onapajo

2016-01-01

Full Text Available This article analyses the contemporary global politics of gay rights as it relates to the straining relations between the Western powers and many African states that oppose sexual minorities’ rights. While the West (with emphasis on the United States, EU, and Britain advocates for the protection of gay rights in the world, Africa provides the largest concentration of states opposed to them. Therefore, there has been rising tension between both regions. This became more apparent after Nigeria and Uganda, respectively, signed their anti-gay bills into law in January and February 2014. In response to this, the Western powers decided to take some punitive measures, especially imposition of sanctions, against the countries to pressurise them to repeal their laws. In an unusual manner, the African states are radically determined to go ahead with their anti-gay laws in open defiance to the demands of the Western powers. This development, which is informed by a number of factors, shows a rather new pattern of behaviour by African states in global politics.

Preliminary study on the characteristics of aerosols over the western pacific ocean

International Nuclear Information System (INIS)

Hu Zhaohui; Liu Pingsheng; Liu Shijie; Yao Ying; Feng Guohua

1996-01-01

Marine aerosol from the western Pacific were collected by two types of samplers during a cruise from Nanhai of China through the west of Philippines to the equatorial and to the north-eastern of Solomon Archipelago. Collected samples were analyzed by PIXE. The data gave aerosol characteristics over the western Pacific, including concentrations, enrichments and mass size distributions of detected elements, and possible sources of these elements were specially researched. The result indicates that Al, Si and Fe were associated with soil particles; Cl, Br, K, Ca and S showed characteristics of the sea-salt origin; and Cu, Zn, and Pb were due to pollution from long-range transport of continental aerosol. We have also made comparison with data obtained in earlier studies over other regions of the Pacific. (author)

Identification of Echinococcus Granulosus Strains in Isolated Hydatid Cyst Specimens from Animals by PCR-RFLP Method in West Azerbaijan – Iran

Directory of Open Access Journals (Sweden)

Haleh Hanifian

2013-09-01

Full Text Available Background: The aim of this study was DNA extraction from protosco­lecses of Echinococcus granulosus and identification of these strains in West-Azerbai­jan Province, north western Iran.Methods: Thirty one livestock isolates from sheep and cattle were collected from abattoirs of the province. To investigate the genetic variation of the isolates, after DNA extraction by Glass beads-phenol chloroform method; PCR-RLFP analysis of rDNA-ITS1 was performed using three different restric­tion enzymes of Taq 1, Rsa 1 and Alu 1.Result: Amplified PCR products for all isolates were 1000bp band which is expected band in sheep strains (G1-G3 complex. The results of RFLP analy­sis also were the same for all isolates. PCR-RFLP patterns restriction en­zymes were identical as follows, Rsa1 bands under UV showed two bands approximately 655bp and 345bp. Alu1 bands were as follows: two approx­imately 800bp and 200bp and Taq1 did not cut any region and bands were approximately 1000 bp in all samples.Conclusions: Based on PCR-RFLP patterns of ITS1 fragment produced with endonucleases enzyme digestion in animal isolates, it can be concluded that a single strain of E. granulosus (sheep strain or G1-G3 complex is domi­nant genotype in this province

Conservation challenges and research needs for Pacific lamprey in the Columbia River Basin

Science.gov (United States)

Clemens, Benjamin J.; Beamish, Richard J.; Coates, Kelly C.; Docker, Margaret F.; Dunham, Jason B.; Gray, Ann E.; Hess, Jon E.; Jolley, Jeffrey C.; Lampman, Ralph T.; McIlraith, Brian J.; Moser, Mary L.; Murauskas, Joshua G.; Noakes, David L. G.; Schaller, Howard A.; Schreck, Carl B.; Starcevich, Steven J.; Streif, Bianca; van de Wetering, Stan J.; Wade, Joy; Weitkamp, Laurie A.; Wyss, Lance A.

2017-01-01

The Pacific Lamprey Entosphenus tridentatus, an anadromous fish native to the northern Pacific Ocean and bordering freshwater habitats, has recently experienced steep declines in abundance and range contractions along the West Coast of North America. During the early 1990s, Native American tribes recognized the declining numbers of lamprey and championed their importance. In 2012, 26 entities signed a conservation agreement to coordinate and implement restoration and research for Pacific Lamprey. Regional plans have identified numerous threats, monitoring needs, and strategies to conserve and restore Pacific Lamprey during their freshwater life stages. Prime among these are needs to improve lamprey passage, restore freshwater habitats, educate stakeholders, and implement lamprey-specific research and management protocols. Key unknowns include range-wide trends in status, population dynamics, population delineation, limiting factors, and marine influences. We synthesize these key unknowns, with a focus on the freshwater life stages of lamprey in the Columbia River basin.

WindFloat Pacific Project, Final Scientific and Technical Report

Energy Technology Data Exchange (ETDEWEB)

Banister, Kevin [Principle Power, Inc., Emeryville, CA (United States)

2017-01-17

PPI’s WindFloat Pacific project (WFP) was an up to 30 MW floating offshore wind demonstration project proposed off the Coast of Oregon. The project was to be sited approximately 18 miles due west of Coos Bay, in over 1000 ft. of water, and is the first floating offshore wind array proposed in the United States, and the first offshore wind project of any kind proposed off the West Coast. PPI’s WindFloat, a semi-submersible foundation designed for high-capacity (6MW+) offshore wind turbines, is at the heart of the proposed project, and enables access to the world class wind resource at the project site and, equally, to other deep water, high wind resource areas around the country.

High-Prevalence and Low-Intensity Ichthyophonus Infections in Pacific Halibut.

Science.gov (United States)

Hershberger, Paul K; Gregg, Jacob L; Dykstra, Claude L

2018-03-01

Ichthyophonus occurred at high prevalence but low intensity in Pacific Halibut Hippoglossus stenolepis throughout the West Coast of North America, ranging from coastal Oregon to the Bering Sea. Infection prevalence in adults was variable on spatial and temporal scales, with the lowest prevalence typically occurring on the edges of the geographic range and highest prevalence consistently occurring inside Prince William Sound, Alaska (58-77%). Additionally, intra-annual differences occurred at Albatross-Portlock, Alaska (71% versus 32% within 2012), and interannual differences occurred along coastal Oregon (50% in 2012 versus 12% in 2015). The infection prevalence was influenced by host age, increasing from 3% or less among the youngest cohorts (age ≤ 6) to 39-54% among age-9-17 cohorts, then decreasing to 27% among the oldest (age-18+) cohorts. There was little indication of significant disease impacts to Pacific Halibut, as the intensity of infection was uniformly low and length at age was similar between infected and uninfected cohorts. These results suggest that Ichthyophonus in Pacific Halibut currently represents a stable parasite-host paradigm in the North Pacific. © 2018 American Fisheries Society.

High‐prevalence and low‐intensity Ichthyophonus infections in Pacific Halibut

Science.gov (United States)

Hershberger, Paul; Gregg, Jacob L.; Dykstra, Claude L.

2018-01-01

Ichthyophonus occurred at high prevalence but low intensity in Pacific Halibut Hippoglossus stenolepis throughout the West Coast of North America, ranging from coastal Oregon to the Bering Sea. Infection prevalence in adults was variable on spatial and temporal scales, with the lowest prevalence typically occurring on the edges of the geographic range and highest prevalence consistently occurring inside Prince William Sound, Alaska (58–77%). Additionally, intra‐annual differences occurred at Albatross–Portlock, Alaska (71% versus 32% within 2012), and interannual differences occurred along coastal Oregon (50% in 2012 versus 12% in 2015). The infection prevalence was influenced by host age, increasing from 3% or less among the youngest cohorts (age ≤ 6) to 39–54% among age‐9–17 cohorts, then decreasing to 27% among the oldest (age‐18+) cohorts. There was little indication of significant disease impacts to Pacific Halibut, as the intensity of infection was uniformly low and length at age was similar between infected and uninfected cohorts. These results suggest that Ichthyophonus in Pacific Halibut currently represents a stable parasite–host paradigm in the North Pacific.

Genomic markers reveal introgressive hybridization in the Indo-West Pacific mangroves: a case study.

Directory of Open Access Journals (Sweden)

Mei Sun

2011-05-01

Full Text Available Biodiversity of mangrove ecosystems is difficult to assess, at least partly due to lack of genetic verification of morphology-based documentation of species. Natural hybridization, on the one hand, plays an important role in evolution as a source of novel gene combinations and a mechanism of speciation. However, on the other hand, recurrent introgression allows gene flow between species and could reverse the process of genetic differentiation among populations required for speciation. To understand the dynamic evolutionary consequences of hybridization, this study examines genomic structure of hybrids and parental species at the population level. In the Indo-West Pacific, Bruguiera is one of the dominant mangrove genera and species ranges overlap extensively with one another. Morphological intermediates between sympatric Bruguiera gymnorrhiza and Bruguiera sexangula have been reported as a variety of B. sexangula or a new hybrid species, B. × rhynchopetala. However, the direction of hybridization and extent of introgression are unclear. A large number of species-specific inter-simple sequence repeat (ISSR markers were found in B. gymnorrhiza and B. sexangula, and the additive ISSR profiling of B. × rhynchopetala ascertained its hybrid status and identified its parental origin. The varying degree of scatterness among hybrid individuals in Principal Coordinate Analysis and results from NewHybrids analysis indicate that B. × rhynchopetala comprises different generations of introgressants in addition to F(1s. High genetic relatedness between B. × rhynchopetala and B. gymnorrhiza based on nuclear and chloroplast sequences suggests preferential hybrid backcrosses to B. gymnorrhiza. We conclude that B. × rhynchopetala has not evolved into an incipient hybrid species, and its persistence can be explained by recurrent hybridization and introgression. Genomic data provide insights into the hybridization dynamics of mangrove plants. Such information

Changes in the interannual SST-forced signals on West African rainfall. AGCM intercomparison

Energy Technology Data Exchange (ETDEWEB)

Mohino, Elsa [LOCEAN/IPSL, Universite Pierre et Marie Curie, Paris Cedex 05 (France); Universidad de Sevilla, Sevilla (Spain); Rodriguez-Fonseca, Belen [Universidad Complutense de Madrid, Dpto. Geofisica y Meteorologia, Madrid (Spain); Instituto de Geociencias (CSIC-UCM), Madrid (Spain); Losada, Teresa [Universidad Complutense de Madrid, Dpto. Geofisica y Meteorologia, Madrid (Spain); Gervois, Sebastien [LOCEAN/IPSL, Universite Pierre et Marie Curie, Paris Cedex 05 (France); Janicot, Serge [LOCEAN/IPSL, IRD, Universite Pierre et Marie Curie, Paris (France); Bader, Juergen [Bjerknes Centre for Climate Research, Bergen (Norway); Ruti, Paolo [Progetto Speciale Clima Globale, Ente Nazionale per le Nuove Tecnologie, l' Energia e l' Ambiente, Rome (Italy); Chauvin, Fabrice [GAME/CNRM, Meteo-France/CNRS, Toulouse (France)

2011-11-15

Rainfall over West Africa shows strong interannual variability related to changes in Sea Surface Temperature (SST). Nevertheless, this relationship seem to be non-stationary. A particular turning point is the decade of the 1970s, which witnessed a number of changes in the climatic system, including the climate shift of the late 1970s. The first aim of this study is to explore the change in the interannual variability of West African rainfall after this shift. The analysis indicates that the dipolar features of the rainfall variability over this region, related to changes in the Atlantic SST, disappear after this period. Also, the Pacific SST variability has a higher correlation with Guinean rainfall in the recent period. The results suggest that the current relationship between the Atlantic and Pacific El Nino phenomena is the principal responsible for these changes. A fundamental goal of climate research is the development of models simulating a realistic current climate. For this reason, the second aim of this work is to test the performance of Atmospheric General Circulation models in simulating rainfall variability over West Africa. The models have been run with observed SSTs for the common period 1957-1998 as part of an intercomparison exercise. The results show that the models are able to reproduce Guinean interannual variability, which is strongly related to SST variability in the Equatorial Atlantic. Nevertheless, problems in the simulation of the Sahelian interannual variability appear: not all models are able to reproduce the observed negative link between rainfall over the Sahel and El Nino-like anomalies in the Pacific, neither the positive correlation between Mediterranean SSTs and Sahelian rainfall. (orig.)

Redescription of the Indo-West Pacific scorpionfish (Scorpaenidae), Neomerinthe erostris (Alcock 1896), a senior synonym of Scorpaena gibbifrons Fowler 1938, N. rotunda Chen 1981, and N. bathyperimensis Zajonz & Klausewitz 2002.

Science.gov (United States)

Motomura, Hiroyuki; Causse, Romain; Béarez, Philippe; Mishra, Subhrendu Sekhar

2015-09-29

The Indo-West Pacific species, Neomerinthe erostris (Alcock 1896), originally described as Scorpaena erostris, is redescribed as a senior synonym of Scorpaena gibbifrons Fowler 1938, N. rotunda Chen 1981, and N. bathyperimensis Zajonz & Klausewitz 2002. Although the latter three nominal species have been regarded as valid species and N. erostris has not been reported since 1898, examinations of type specimens of the four nominal species revealed that they represent a single species. A lectotype of Scorpaena erostris is herein designated. Neomerinthe erostris is characterized by having a distinct longitudinal ridge on the lateral surface of the maxilla and a strongly rounded dorsal profile of the head.

New Evidence for Quaternary Strain Partitioning Along the Queen Charlotte Fault System, Southeastern Alaska

Science.gov (United States)

Walton, M. A. L.; Miller, N. C.; Brothers, D. S.; Kluesner, J.; Haeussler, P. J.; Conrad, J. E.; Andrews, B. D.; Ten Brink, U. S.

2017-12-01

The Queen Charlotte Fault (QCF) is a fast-moving ( 53 mm/yr) transform plate boundary fault separating the Pacific Plate from the North American Plate along western Canada and southeastern Alaska. New high-resolution bathymetric data along the fault show that the QCF main trace accommodates nearly all strike-slip plate motion along a single narrow deformation zone, though questions remain about how and where smaller amounts of oblique convergence are accommodated along-strike. Obliquity and convergence rates are highest in the south, where the 2012 Haida Gwaii, British Columbia MW 7.8 thrust earthquake was likely caused by Pacific underthrusting. In the north, where obliquity is lower, aftershocks from the 2013 Craig, Alaska MW 7.5 strike-slip earthquake also indicate active convergent deformation on the Pacific (west) side of the plate boundary. Off-fault structures previously mapped in legacy crustal-scale seismic profiles may therefore be accommodating part of the lesser amounts of Quaternary convergence north of Haida Gwaii. Between 2015 and 2017, the USGS acquired more than 8,000 line-km of offshore high-resolution multichannel seismic (MCS) data along the QCF to better understand plate boundary deformation. The new MCS data show evidence for Quaternary deformation associated with a series of elongate ridges located within 30 km of the QCF main trace on the Pacific side. These ridges are anticlinal structures flanked by growth faults, with recent deformation and active fluid flow characterized by seafloor scarps and seabed gas seeps at ridge crests. Structural and morphological evidence for contractional deformation decreases northward along the fault, consistent with a decrease in Pacific-North America obliquity along the plate boundary. Preliminary interpretations suggest that plate boundary transpression may be partitioned into distinctive structural domains, in which convergent stress is accommodated by margin-parallel thrust faulting, folding, and ridge

Pathotypic characterization of Newcastle disease virus isolated from vaccinated chicken in West Java, Indonesia.

Science.gov (United States)

Putri, Dwi Desmiyeni; Handharyani, Ekowati; Soejoedono, Retno Damajanti; Setiyono, Agus; Mayasari, Ni Luh Putu Ika; Poetri, Okti Nadia

2017-04-01

This research was conducted to differentiate and characterize eight Newcastle disease virus (NDV) isolates collected from vaccinated chicken at commercial flocks in West Java, Indonesia, in 2011, 2014 and 2015 by pathotype specific primers. A total of eight NDV isolates collected from clinical outbreaks among commercial vaccinated flocks in West Java, Indonesia, in 2011, 2014, and 2015 were used in this study. Reverse transcription-polymerase chain reaction was used to detect and differentiate virulence of NDV strains, using three sets of primers targeting their M and F gene. First primers were universal primers to detect NDV targeting matrix (M) gene. Other two sets of primers were specific for the fusion (F) gene cleavage site sequence of virulent and avirulent NDV strains. Our results showed that three isolates belong to NDV virulent strains, and other five isolates belong to NDV avirulent strains. The nucleotide sequence of the F protein cleavage site showed 112 K/R-R-Q/R-K-R/G-F 117 on NDV virulent strains and 112 G-K/R-Q-G-R-L 117 on NDV avirulent strain. Result from the current study suggested that NDV virulent strain were circulating among vaccinated chickens in West Java, Indonesia; this might possess a risk of causing ND outbreaks and causing economic losses within the poultry industry.

78 FR 49258 - Fisheries in the Western Pacific; Special Coral Reef Ecosystem Fishing Permit

Science.gov (United States)

2013-08-13

... the Western Pacific; Special Coral Reef Ecosystem Fishing Permit AGENCY: National Marine Fisheries... Reef Ecosystem Fishing Permit that would authorize Kampachi Farms, LLC, to culture and harvest a coral reef ecosystem management unit fish species in a floating pen moored about 5.5 nm off the west coast of...

Stock structure and demographic history of the Indo-West Pacific mud crab Scylla serrata

Science.gov (United States)

Fratini, Sara; Ragionieri, Lapo; Cannicci, Stefano

2010-01-01

The increasing exploitation of mangrove forests, without any sustainable planning, has been seriously compromising the survival of this ecosystem and of its exclusive resources. Scylla serrata is one of the most commercially exploited crabs inhabiting mangroves and estuaries of the Indo-Pacific region. This species is extensively harvested, mainly for selling to the tourist market, and, as a consequence, its populations are in constant decline. The aim of the present study was to assess the level of genetic exchange of S. serrata within the Western Indian Ocean (WIO), using a population genetic structure approach. To achieve this goal, we reconstructed the intra-specific geographic pattern of genetic variation by partial sequencing the mitochondrial DNA cytochrome oxidase subunit I, in samples from seven mangrove sites of the WIO. Our data set then encompassed all the sequences for the same genetic marker deposited in Genbank and corresponding to samples from South East Asia, Australia and some Pacific Islands: this allowed us to estimate the level of connectivity among S. serrata populations within its distribution area. Our results show that an unique Scylla serrata metapopulation exists within the WIO; while throughout the entire Indo-Pacific region at least three distinct genetic stocks occur, corresponding to well-defined geographic regions (WIO, Eastern Australia and Pacific Ocean, North-Western Australia). South East China appears as the depositary of the most ancient haplotype and at the present time shares a haplotype with the Red Sea. The WIO populations show the signature of recent population bottlenecks, as expected for populations deeply exploited in a recent past. On the basis of our results, we can conclude that both the S. serrata populations and their habitats, i.e. mangrove forests and estuaries, of the WIO require future management and conservation regulations to avoiding overexploitation of this important key predator and marketable resource.

Content of Cr, Cu, Pb, and Zn on Pacific white shrimp cultured in modern farm at BLUPPB, Karawang, West Java

Science.gov (United States)

Takarina, N. D.; Rahman, A.; Siswanting, T.; Pin, T. J.

2018-03-01

Heavy metal is one of the hazardous substances which often found in shrimp farm. Since this shrimp become mostly favorable food, it is necessary to determine the content of metal in this shrimps. This research was aimed to determine the content of Cr, Cu, Pb, and Zn on Pacific white shrimp cultured on the modern farm at BLUPPB, Karawang, West Java. Samples were taken from five farms. During transport, samples were kept in a more relaxed box. Farms used were designed using black plastic as the bottom layer to separate contact with soil. Heavy metal of Cr, Cu, Pb, and Zn on shrimp meat was analyzed using Atomic Absorption Spectrophotometry method. The content of Cr was ranged from 0.06 – 0.38 ppm and Pb were 0.02 – 0.05 ppm. The content of Cu was ranged from 1.89 – 15.25 ppm and Zn were 2.16 – 3.92 ppm. According to government rules and literature, those content were below a threshold which was 0.4 ppm for Cu, 0.5 ppm for Pb, 20 ppm for Cu and 0.2 ppm for Zn.

Mechanisms of peripheral phylogeographic divergence in the indo-Pacific: lessons from the spiny lobster Panulirus homarus.

Science.gov (United States)

Farhadi, Ahmad; Jeffs, Andrew G; Farahmand, Hamid; Rejiniemon, Thankappan Sarasam; Smith, Greg; Lavery, Shane D

2017-08-18

There is increasing recognition of the concordance between marine biogeographic and phylogeographic boundaries. However, it is still unclear how population-level divergence translates into species-level divergence, and what are the principal factors that first initiate that divergence, and then maintain reproductive isolation. This study examines the likely forces driving population and lineage divergences in the broadly-distributed Indo-Pacific spiny lobster Panulirus homarus, which has peripheral divergent lineages in the west and east. The study focuses particularly on the West Indian Ocean, which is emerging as a region of unexpected diversity. Mitochondrial control region (mtCR) and COI sequences as well as genotypes of 9 microsatellite loci were examined in 410 individuals from 17 locations grouped into 7 regions from South Africa in the west, and eastward across to Taiwan and the Marquesas Islands. Phylogenetic and population-level analyses were used to test the significance and timing of divergences and describe the genetic relationships among populations. Analyses of the mtCR revealed high levels of divergence among the seven regions (Ф ST  = 0.594, P Indo-Pacific that helps drive some of the regions' recognized biogeographic boundaries.

Marine biodiversity in the Atlantic and Pacific coasts of South America: knowledge and gaps.

Science.gov (United States)

Miloslavich, Patricia; Klein, Eduardo; Díaz, Juan M; Hernández, Cristián E; Bigatti, Gregorio; Campos, Lucia; Artigas, Felipe; Castillo, Julio; Penchaszadeh, Pablo E; Neill, Paula E; Carranza, Alvar; Retana, María V; Díaz de Astarloa, Juan M; Lewis, Mirtha; Yorio, Pablo; Piriz, María L; Rodríguez, Diego; Yoneshigue-Valentin, Yocie; Gamboa, Luiz; Martín, Alberto

2011-01-31

The marine areas of South America (SA) include almost 30,000 km of coastline and encompass three different oceanic domains--the Caribbean, the Pacific, and the Atlantic--ranging in latitude from 12∘N to 55∘S. The 10 countries that border these coasts have different research capabilities and taxonomic traditions that affect taxonomic knowledge. This paper analyzes the status of knowledge of marine biodiversity in five subregions along the Atlantic and Pacific coasts of South America (SA): the Tropical East Pacific, the Humboldt Current,the Patagonian Shelf, the Brazilian Shelves, and the Tropical West Atlantic, and it provides a review of ecosystem threats and regional marine conservation strategies. South American marine biodiversity is least well known in the tropical subregions (with the exception of Costa Rica and Panama). Differences in total biodiversity were observed between the Atlantic and Pacific oceans at the same latitude. In the north of the continent, the Tropical East Pacific is richer in species than the Tropical West Atlantic, however, when standardized by coastal length, there is very little difference among them. In the south, the Humboldt Current system is much richer than the Patagonian Shelf. An analysis of endemism shows that 75% of the species are reported within only one of the SA regions, while about 22% of the species of SA are not reported elsewhere in the world. National and regional initiatives focusing on new exploration, especially to unknown areas and ecosystems, as well as collaboration among countries are fundamental to achieving the goal of completing inventories of species diversity and distribution.These inventories will allow accurate interpretation of the biogeography of its two oceanic coasts and latitudinal trends,and will also provide relevant information for science based policies.

Genetic Diversity of the Hepatitis B Virus Strains in Cuba: Absence of West-African Genotypes despite the Transatlantic Slave Trade

Science.gov (United States)

Rodríguez Lay, Licel A.; Corredor, Marité B.; Villalba, Maria C.; Frómeta, Susel S.; Wong, Meilin S.; Valdes, Lidunka; Samada, Marcia; Sausy, Aurélie; Hübschen, Judith M.; Muller, Claude P.

2015-01-01

Cuba is an HBsAg low-prevalence country with a high coverage of anti-hepatitis B vaccine. Its population is essentially the result of the population mix of Spanish descendants and former African slaves. Information about genetic characteristics of hepatitis B virus (HBV) strains circulating in the country is scarce. The HBV genotypes/subgenotypes, serotypes, mixed infections, and S gene mutations of 172 Cuban HBsAg and HBV-DNA positive patients were determined by direct sequencing and phylogenetic analysis. Phylogenetic analysis of HBV S gene sequences showed a predominance of genotype A (92.4%), subgenotype A2 (84.9%) and A1 (7.6%). Genotype D (7.0%) and subgenotype C1 (0.6%) were also detected but typical (sub)genotypes of contemporary West-Africa (E, A3) were conspicuously absent. All genotype A, D, and C strains exhibited sequence characteristics of the adw2, ayw2, and adrq serotypes, respectively. Thirty-three (19.1%) patients showed single, double, or multiple point mutations inside the Major Hydrophilic domain associated with vaccine escape; eighteen (10.5%) patients had mutations in the T-cell epitope (amino acids 28-51), and there were another 111 point mutations downstream of the S gene. One patient had an HBV A1/A2 mixed infection. This first genetic study of Cuban HBV viruses revealed only strains that were interspersed with strains from particularly Europe, America, and Asia. The absence of genotype E supports previous hypotheses about an only recent introduction of this genotype into the general population in Africa. The presence of well-known vaccine escape (3.5%) and viral resistance mutants (2.9%) warrants strain surveillance to guide vaccination and treatment strategies. PMID:25978398

A mutation in the envelope protein fusion loop attenuates mouse neuroinvasiveness of the NY99 strain of West Nile virus

International Nuclear Information System (INIS)

Zhang Shuliu; Li Li; Woodson, Sara E.; Huang, Claire Y.-H.; Kinney, Richard M.; Barrett, Alan D.T.; Beasley, David W.C.

2006-01-01

Substitutions were engineered individually and in combinations at the fusion loop, receptor-binding domain and a stem-helix structure of the envelope protein of a West Nile virus strain, NY99, and their effects on mouse virulence and presentation of epitopes recognized by monoclonal antibodies (MAbs) were assessed. A single substitution within the fusion loop (L107F) attenuated mouse neuroinvasiveness of NY99. No substitutions attenuated NY99 neurovirulence. The L107F mutation also abolished binding of a non-neutralizing MAb, 3D9, whose epitope had not been previously identified. MAb 3D9 was subsequently shown to be broadly cross-reactive with other flaviviruses, consistent with binding near the highly conserved fusion loop

Experimental infection of rock pigeons (Columba livia) with three West Nile virus lineage 1 strains isolated in Italy between 2009 and 2012.

Science.gov (United States)

Spedicato, M; Carmine, I; Bellacicco, A L; Marruchella, G; Marini, V; Pisciella, M; Di Francesco, G; Lorusso, A; Monaco, F; Savini, G

2016-04-01

West Nile virus (WNV) circulation dynamics in the context of the urban environment is not yet elucidated. In this perspective, three groups of eight rock pigeons (Columbia livia) were inoculated with three WNV lineage 1 strains isolated in Italy between 2009 and 2012. The pigeons did not develop any clinical signs consistent with WNV acute infection. All animals seroconverted and shed virus up to 15 days post-infection by the oral or cloacal routes. In all infected groups viraemia lasted for 4 days post-infection. No WNV-specific gross or histological lesions were found in infected birds compared to control birds and immunohistochemistry remained constantly negative from all tissues. The reservoir competence index was also assessed and it ranged between 0·11 and 0·14. This study demonstrates that pigeons are competent reservoir hosts for Italian WNV lineage 1 circulating strains thus potentially posing a risk to the public health system.

Uterine Torsion in a West African Dwarf Ewe in Ibadan, Nigeria ...

African Journals Online (AJOL)

Keywords: Uterine torsion, West African Dwarf Ewe, Ibadan A case of uterine torsion in a 21/2 year old pluriparous West Africa Dwarf (WAD) ewe raised semi intensively with adequate veterinary care before the death of the dam and the lamb is presented. The dam had been off feed for 3 days and was found straining a night ...

West Nile virus infection of birds, Mexico.

Science.gov (United States)

Guerrero-Sánchez, Sergio; Cuevas-Romero, Sandra; Nemeth, Nicole M; Trujillo-Olivera, María Teresa Jesús; Worwa, Gabriella; Dupuis, Alan; Brault, Aaron C; Kramer, Laura D; Komar, Nicholas; Estrada-Franco, José Guillermo

2011-12-01

West Nile virus (WNV) has caused disease in humans, equids, and birds at lower frequency in Mexico than in the United States. We hypothesized that the seemingly reduced virulence in Mexico was caused by attenuation of the Tabasco strain from southeastern Mexico, resulting in lower viremia than that caused by the Tecate strain from the more northern location of Baja California. During 2006-2008, we tested this hypothesis in candidate avian amplifying hosts: domestic chickens, rock pigeons, house sparrows, great-tailed grackles, and clay-colored thrushes. Only great-tailed grackles and house sparrows were competent amplifying hosts for both strains, and deaths occurred in each species. Tecate strain viremia levels were higher for thrushes. Both strains produced low-level viremia in pigeons and chickens. Our results suggest that certain avian hosts within Mexico are competent for efficient amplification of both northern and southern WNV strains and that both strains likely contribute to bird deaths.

Pacific and Atlantic Lepeophtheirus salmonis (Krøyer, 1838) are allopatric subspecies: Lepeophtheirus salmonis salmonis and L. salmonis oncorhynchi subspecies novo.

Science.gov (United States)

Skern-Mauritzen, Rasmus; Torrissen, Ole; Glover, Kevin Alan

2014-03-14

The salmon louse Lepeophtheirus salmonis is a parasitic copepod that infects salmonids in the Pacific and Atlantic oceans. Although considered as a single species, morphological and biological differences have been reported between lice from the two oceans. Likewise, studies based on nucleotide sequencing have demonstrated that sequence differences between Atlantic and Pacific L. salmonis are highly significant, albeit smaller than the divergence observed between congeneric copepod species. We demonstrated reproductive compatibility between L. salmonis from the two oceans and successfully established F2 hybrid strains using separate maternal lines from both the Pacific and Atlantic. The infection success for the F2 hybrid strains were similar to results typically observed for non hybrid lice strains in the rearing facility used. Lepeophtheirus salmonis COI and 16S sequences divergence between individuals from the Pacific and the Atlantic oceans was high compared to what may be expected within a copepod species and phylogenetic analysis showed that they consistently formed monophyletic clades representing their origin from the Pacific or Atlantic oceans. Lepeophtheirus salmonis from the Pacific and Atlantic oceans are reproductively compatible at least until adults at the F2 hybrid stage, and should not be regarded as separate species based on reproductive segregation or sequence divergence levels. Reported biological and genetic differences in L. salmonis seen in conjunction with the reported genetic diversity commonly observed between and within species demonstrate that Atlantic and Pacific L. salmonis should be regarded as two subspecies: Lepeophtheirus salmonis salmonis and L. salmonis oncorhynchi subsp. nov.

Gas export potential of Russia's East: Will it match Asia-Pacific markets?

International Nuclear Information System (INIS)

Khartukov, E.; Starostina, E.

2002-01-01

Russia's Far East and East Siberia are emerging as new major sources of gas supplies for East Asian energy markets. Thanks to ongoing and earmarked resource and infrastructure developments in Sakhalin, Yakutia (Sakha) and Irkutsk, by around 2020 these poorly developed but naturally endowed areas of the country's East can provide between 50 and 70 Bcm/yr (5-7 Bcfd) of natural gas, including up to 10 Mt/yr of LNG, available for exports to neighbouring Pacific countries (primarily to the PRC, Japan, South Korea as well as to Taiwan and the U.S. West Coast). This can noticeably reshape today's matrix of the Asia-Pacific energy flows and even destabilize the regional gas market. (author)

Population genetic structure in Atlantic and Pacific Ocean common murres (Uria aalge): Natural replicate tests of post-Pleistocene evolution

Science.gov (United States)

Morris-Pocock, J. A.; Taylor, S.A.; Birt, T.P.; Damus, M.; Piatt, John F.; Warheit, K.I.; Friesen, Vicki L.

2008-01-01

Understanding the factors that influence population differentiation in temperate taxa can be difficult because the signatures of both historic and contemporary demographics are often reflected in population genetic patterns. Fortunately, analyses based on coalescent theory can help untangle the relative influence of these historic and contemporary factors. Common murres (Uria aalge) are vagile seabirds that breed in the boreal and low arctic waters of the Northern Hemisphere. Previous analyses revealed that Atlantic and Pacific populations are genetically distinct; however, less is known about population genetic structure within ocean basins. We employed the mitochondrial control region, four microsatellite loci and four intron loci to investigate population genetic structure throughout the range of common murres. As in previous studies, we found that Atlantic and Pacific populations diverged during the Pleistocene and do not currently exchange migrants. Therefore, Atlantic and Pacific murre populations can be used as natural replicates to test mechanisms of population differentiation. While we found little population genetic structure within the Pacific, we detected significant east-west structuring among Atlantic colonies. The degree that population genetic structure reflected contemporary population demographics also differed between ocean basins. Specifically, while the low levels of population differentiation in the Pacific are at least partially due to high levels of contemporary gene flow, the east-west structuring of populations within the Atlantic appears to be the result of historic fragmentation of populations rather than restricted contemporary gene flow. The contrasting results in the Atlantic and Pacific Oceans highlight the necessity of carefully considering multilocus nonequilibrium population genetic approaches when reconstructing the demographic history of temperate Northern Hemisphere taxa. ?? 2008 The Authors.

Amphidromy links a newly documented fish community of continental Australian streams, to oceanic islands of the west Pacific.

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Paul A Thuesen

Full Text Available BACKGROUND: Indo-Pacific high island streams experience extreme hydrological variation, and are characterised by freshwater fish species with an amphidromous life history. Amphidromy is a likely adaptation for colonisation of island streams following stochastic events that lead to local extirpation. In the Wet Tropics of north-eastern Australia, steep coastal mountain streams share similar physical characteristics to island systems. These streams are poorly surveyed, but may provide suitable habitat for amphidromous species. However, due to their ephemeral nature, common non-diadromous freshwater species of continental Australia are unlikely to persist. Consequently, we hypothesise that coastal Wet Tropics streams are faunally more similar, to distant Pacific island communities, than to nearby faunas of large continental rivers. METHODS/PRINCIPAL FINDINGS: Surveys of coastal Wet Tropics streams recorded 26 species, 10 of which are first records for Australia, with three species undescribed. This fish community is unique in an Australian context in that it contains mostly amphidromous species, including sicydiine gobies of the genera Sicyopterus, Sicyopus, Smilosicyopus and Stiphodon. Species presence/absence data of coastal Wet Tropics streams were compared to both Wet Tropics river networks and Pacific island faunas. ANOSIM indicated the fish fauna of north-eastern Australian coastal streams were more similar to distant Pacific islands (R = 0.76, than to nearby continental rivers (R = 0.98. MAIN CONCLUSIONS/SIGNIFICANCE: Coastal Wet Tropics streams are faunally more similar to distant Pacific islands (79% of species shared, than to nearby continental fauna due to two factors. First, coastal Wet Tropics streams lack many non-diadromous freshwater fish which are common in nearby large rivers. Second, many amphidromous species found in coastal Wet Tropics streams and Indo-Pacific islands remain absent from large rivers of the Wet Tropics

Vicariance and Oceanic Barriers Drive Contemporary Genetic Structure of Widespread Mangrove Species Sonneratia alba J. Sm in the Indo-West Pacific

Directory of Open Access Journals (Sweden)

Alison K. S. Wee

2017-12-01

Full Text Available Patterns of genetic structure are essential for a comprehensive understanding of the evolution and biogeography of a species. Here, we investigated the genetic patterns of one of the most widespread and abundant mangrove species in the Indo-West Pacific, Sonneratia alba J. Sm., in order to gain insights into the ecological and evolutionary drivers of genetic structure in mangroves. We employed 11 nuclear microsatellite loci and two chloroplast regions to genotyped 25 S. alba populations. Our objectives were to (1 assess the level of genetic diversity and its geographic distribution; and (2 determine the genetic structure of the populations. Our results revealed significant genetic differentiation among populations. We detected a major genetic break between Indo-Malesia and Australasia, and further population subdivision within each oceanic region in these two major clusters. The phylogeographic patterns indicated a strong influence of vicariance, oceanic barriers and geographic distance on genetic structure. In addition, we found low genetic diversity and high genetic drift at range edge. This study advances the scope of mangrove biogeography by demonstrating a unique scenario whereby a widespread species has limited dispersal and high genetic divergence among populations.

Dwarf mistletoe and host tree interactions in managed forests of the Pacific Northwest.

Science.gov (United States)

Donald M. Knutson; Robert. Tinnin

1980-01-01

Dwarf mistletoes in the Pacific Northwest infect true firs, larch, pine, Douglas-fir, and hemlock. Forty-one percent of all stands east of the crest of the Cascade Range and 10 percent of west-side stands are infected. General characteristics of dwarf mistletoe are discussed including mortality and growth losses rate of spread within a tree and within stands. Relation...

Progress on the development of seismic resilient Tall CLT Buildings in the Pacific Northwest

Science.gov (United States)

Shiling Pei; Jeffrey Berman; Daniel Dolan; John van de Lindt; James Ricles; Richard Sause; Hans-Erik Blomgren; Marjan Popovski; Douglas Rammer

2014-01-01

As urban densification occurs in U.S. regions of high seismicity, there is a natural demand for seismically resilient tall buildings that are reliable, economically viable, and can be rapidly constructed. In urban regions on the west coast of the U.S., specifically the Pacific Northwest, there is significant interest in utilizing CLT in 8-20 story residential and...

Biogeography of tropical Indo-West Pacific parasites: a cryptic species of Transversotrema and evidence for rarity of Transversotrematidae (Trematoda) in French Polynesia.

Science.gov (United States)

Cribb, Thomas H; Adlard, Robert D; Bray, Rodney A; Sasal, Pierre; Cutmore, Scott C

2014-04-01

We sought transversotrematid trematodes from French Polynesian fishes by examining 304 individual scaled fishes of 53 species from seven families known to harbour the family elsewhere. A single species was found at two locations in the Tuamotus Archipelago on two species of Chaetodontidae (Chaetodon auriga and Chaetodon ephippium) and one species of Lutjanidae (Lutjanus gibbus). The species closely resembles Transversotrema borboleta Hunter & Cribb, 2012 from chaetodontids and lutjanids of the northern Great Barrier Reef (GBR) but differs from it consistently in 8 base positions of ITS2 rDNA. This level of variation exceeds that between some clearly morphologically distinct pairs of species of Transversotrema and the form from French Polynesia is thus interpreted as a distinct, though cryptic, species and named Transversotrema polynesiae n. sp. The new species forms part of a complex of species, here characterised as the T. borboleta complex, associated with chaetodontids and lutjanids in the tropical Indo-West Pacific. Most of the putative species within this complex are yet to be described. Comparison of identical numbers of matched samples of fishes from French Polynesia, Heron Island (southern GBR) and Lizard Island (northern GBR) revealed 1, 4 and 10 species of Transversotrema respectively suggesting that the French Polynesian fauna is depauperate for this family. In addition to those species apparently missing from suitable hosts in French Polynesia, several species from further west infect fishes (especially Nemipteridae) that are themselves absent from French Polynesia. This dramatic east-west decline in richness contrasts strongly with what is known for monogeneans, which appear to maintain their richness over the same scale, and is more precipitate than is known for other groups of trematodes. The decline might be explained in part by the absence of the as yet unknown first intermediate hosts in French Polynesia. However, we predict that it is explained

Mid-Pliocene equatorial Pacific sea surface temperature reconstruction: a multi-proxy perspective

Science.gov (United States)

Dowsett, Harry J.; Robinson, Marci M.

2009-01-01

The Mid-Pliocene is the most recent interval of sustained global warmth, which can be used to examine conditions predicted for the near future. An accurate spatial representation of the low-latitude Mid-Pliocene Pacific surface ocean is necessary to understand past climate change in the light of forecasts of future change. Mid-Pliocene sea surface temperature (SST) anomalies show a strong contrast between the western equatorial Pacific (WEP) and eastern equatorial Pacific (EEP) regardless of proxy (faunal, alkenone and Mg/Ca). All WEP sites show small differences from modern mean annual temperature, but all EEP sites show significant positive deviation from present-day temperatures by as much as 4.4°C. Our reconstruction reflects SSTs similar to modern in the WEP, warmer than modern in the EEP and eastward extension of the WEP warm pool. The east-west equatorial Pacific SST gradient is decreased, but the pole to equator gradient does not change appreciably. We find it improbable that increased greenhouse gases (GHG) alone would cause such a heterogeneous warming and more likely that the cause of Mid-Pliocene warmth is a combination of several forcings including both increased meridional heat transport and increased GHG.

High prevalence and low intensity Ichthyophonus infections in Pacific Halibut (Hippoglossus stenolepis).

Science.gov (United States)

Hershberger, Paul K; Gregg, Jacob L; Dykstra, Claude L

2017-10-13

Ichthyophonus occurred at high prevalence but low intensity in Pacific Halibut (Hippoglossus stenolepis) throughout the west coast of North America, ranging from coastal Oregon to the Bering Sea. Infection prevalence in adults was variable on spatial and temporal scales, with the lowest prevalence typically occurring on the edges of the geographic range and highest prevalence consistently occurring inside Prince William Sound, AK (58-77%). Additionally, intra-annual differences occurred at Albatross - Portlock, AK (71% versus 32% within 2012) and inter-annual differences occurred along coastal Oregon (50% versus 12% from 2012 to 2015). The infection prevalence was influenced by host age, increasing from ≤ 3% among the youngest cohorts (≤age 6) to 39-54% among age 9-17 cohorts, then decreasing to 27% among the oldest (age 18+) cohorts. There was little indication of significant disease impacts to Pacific Halibut, as the intensity of infection was uniformly low and length-at-age was similar between infected and uninfected cohorts. These results suggest that Ichthyophonus in Pacific Halibut currently represents a stable parasite-host paradigm in the North Pacific. Received 04 May 2017 accepted 09 Oct 2017 revised 21 Sep 2017.

Control of tropical instability waves in the Pacific

Science.gov (United States)

Allen, M. R.; Lawrence, S. P.; Murray, M. J.; Mutlow, C. T.; Stockdale, T. N.; Llewellyn-Jones, D. T.; Anderson, D. L. T.

Westward-propagating waves with periods of 20-30 days and wavelengths of ˜ 1,100km are a prominent feature of sea-surface temperatures (SSTs) in the equatorial Pacific and Atlantic Oceans. They have been attributed to instabilities due to current shear. We compare SST observations from the spaceborne Along Track Scanning Radiometer (ATSR) and TOGA-TAO moored buoys with SSTs from a model of the tropical Pacific forced with observed daily windstress data. The phases of the strongest “Tropical Instability Waves” (TIWs) in the model are in closer correspondence with those observed than we would expect if these waves simply developed from infinitesimal disturbances (in which case their phases would be arbitrary). If we filter out the intraseasonal component of the windstress, all phase-correspondence is lost. We conclude that the phases of these waves are not arbitrary, but partially determined by the intraseasonal winds. The subsurface evolution of the model suggests a possible control mechanism is through interaction with remotely-forced subsurface Kelvin and Rossby waves. This is supported by an experiment which shows how zonal wind bursts in the west Pacific can modify the TIW field, but other mechanisms, such as local feedbacks, are also possible.

High-Speed Vessel Noises in West Hong Kong Waters and Their Contributions Relative to Indo-Pacific Humpback Dolphins (Sousa chinensis

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Paul Q. Sims

2012-01-01

Full Text Available The waters of West Hong Kong are home to a population of Indo-Pacific humpback dolphins (Sousa chinensis that use a variety of sounds to communicate. This area is also dominated by intense vessel traffic that is believed to be behaviorally and acoustically disruptive to dolphins. While behavioral changes have been documented, acoustic disturbance has yet to be shown. We compared the relative sound contributions of various high-speed vessels to nearby ambient noise and dolphin social sounds. Ambient noise levels were also compared between areas of high and low traffic. We found large differences in sound pressure levels between high traffic and no traffic areas, suggesting that vessels are the main contributors to these discrepancies. Vessel sounds were well within the audible range of dolphins, with sounds from 315–45,000 Hz. Additionally, vessel sounds at distances ≥100 m exceeded those of dolphin sounds at closer distances. Our results reaffirm earlier studies that vessels have large sound contributions to dolphin habitats, and we suspect that they may be inducing masking effects of dolphin sounds at close distances. Further research on dolphin behavior and acoustics in relation to vessels is needed to clarify impacts.

Haemophilus ducreyi Cutaneous Ulcer Strains Are Nearly Identical to Class I Genital Ulcer Strains.

Directory of Open Access Journals (Sweden)

Dharanesh Gangaiah

Full Text Available Although cutaneous ulcers (CU in the tropics is frequently attributed to Treponema pallidum subspecies pertenue, the causative agent of yaws, Haemophilus ducreyi has emerged as a major cause of CU in yaws-endemic regions of the South Pacific islands and Africa. H. ducreyi is generally susceptible to macrolides, but CU strains persist after mass drug administration of azithromycin for yaws or trachoma. H. ducreyi also causes genital ulcers (GU and was thought to be exclusively transmitted by microabrasions that occur during sex. In human volunteers, the GU strain 35000HP does not infect intact skin; wounds are required to initiate infection. These data led to several questions: Are CU strains a new variant of H. ducreyi or did they evolve from GU strains? Do CU strains contain additional genes that could allow them to infect intact skin? Are CU strains susceptible to azithromycin?To address these questions, we performed whole-genome sequencing and antibiotic susceptibility testing of 5 CU strains obtained from Samoa and Vanuatu and 9 archived class I and class II GU strains. Except for single nucleotide polymorphisms, the CU strains were genetically almost identical to the class I strain 35000HP and had no additional genetic content. Phylogenetic analysis showed that class I and class II strains formed two separate clusters and CU strains evolved from class I strains. Class I strains diverged from class II strains ~1.95 million years ago (mya and CU strains diverged from the class I strain 35000HP ~0.18 mya. CU and GU strains evolved under similar selection pressures. Like 35000HP, the CU strains were highly susceptible to antibiotics, including azithromycin.These data suggest that CU strains are derivatives of class I strains that were not recognized until recently. These findings require confirmation by analysis of CU strains from other regions.

76 FR 33189 - Fisheries Off West Coast States; Coastal Pelagic Species Fisheries; Amendment 13 to the Coastal...

Science.gov (United States)

2011-06-08

... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration 50 CFR Part 660 RIN 0648-BA68 Fisheries Off West Coast States; Coastal Pelagic Species Fisheries; Amendment 13 to the Coastal... Pacific Fishery Management Council (Council) has submitted Amendment 13 to the Coastal Pelagic Species...

Changes in Central Walker Lane Strain Accommodation near Bridgeport, California; as told by the Stanislaus Group

Science.gov (United States)

Carlson, C. W.; Pluhar, C. J.; Glen, J. M.; Farner, M. J.

2012-12-01

Accommodating ~20-25% of the dextral-motion between the Pacific and North American plates the Walker Lane is represented as an elongate, NW oriented, region of active tectonics positioned between the northwesterly-translating Sierra Nevada microplate and the east-west extension of the Basin and Range. This region of transtension is being variably accommodated on regional-scale systems of predominantly strike-slip faulting. At the western edge of the central Walker Lane (ca. 38°-39°N latitude) is a region of crustal-scale blocks bounded by wedge-shaped depositional-basins and normal-fault systems, here defined as the west-central Walker Lane (WCWL). Devoid of obvious strike-slip faulting, the presence of tectonic-block vertical-axis rotations in the WCWL represents unrecognized components of dextral-shearing and/or changes of strain-accommodation over time. We use paleomagnetic reference directions for Eureka Valley Tuff (EVT) members of the late Miocene Stanislaus Group as spatial and temporal markers for documentation of tectonic-block vertical-axis rotations near Bridgeport, CA. Study-site rotations revealed discrete rotational domains of mean vertical-axis rotation ranging from ~10°-30° with heterogeneous regional distribution. Additionally, the highest measured magnitudes of vertical-axis rotation (~50°-60° CW) define a 'Region of High Strain' that includes the wedge-shaped Bridgeport Valley (Basin). This study revealed previously-unrecognized tectonic rotation of reference direction sites from prior studies for two (By-Day and Upper) of the three members of the EVT, resulting in under-estimates of regional strain accommodation by these studies. Mean remanent directions and virtual geomagnetic poles utilized in our study yielded a recalculated reference direction for the By-Day member of: Dec.=353.2°; Inc.= 43.7°; α95=10.1, in agreement with new measurements in the stable Sierra Nevada. This recalculated direction confirmed the presence of previously

77 FR 40793 - West Virginia Regulatory Program

Science.gov (United States)

2012-07-11

... enumerated in Senate Bill 579 will ease the strain placed on the Fund. Formatting and style changes have been..., 30 CFR part 948 is amended as set forth below: PART 948--WEST VIRGINIA 0 1. The authority citation... amendments. * * * * * Date of Original amendment submission publication of Citation/description of approved...

CO2 and circulation in the deglacial North Pacific

Science.gov (United States)

Taylor, B.; Rae, J. W. B.; Gray, W. R.; Rees-Owen, R. L.; Burke, A.

2017-12-01

The North Pacific is the largest carbon reservoir in the global ocean, but has not typically been thought to play an active role in deglacial CO2 rise based on its modern stratified state. Recent studies (Okazaki et al., 2010; Rae et al., 2014; Max et al., 2017), however, have suggested that a more dynamic circulation regime operated in the glacial and deglacial North Pacific and, as such, the role of the North Pacific in deglacial CO2 rise may have been underestimated. We present two new high-resolution boron isotope records of surface water pCO2 from the North West and North East Pacific spanning the last 22 kyrs. The two records show remarkable coherence over key intervals during the last deglaciation and highlight major changes over a number of abrupt climate events. At both sites, following the LGM, pCO2(sw) rises, coincident with a younging of North Pacific intermediate and deep waters. This suggests that increased local overturning mixed CO2-rich deep waters throughout the water column, likely contributing to CO2 outgassing during Heinrich Stadial 1 (HS1). Both records exhibit decreases in pCO2(sw) during the latter stages of HS1, which are immediately followed by a rapid increase in pCO2(sw) at the onset of the Bølling-Allerød (B/A). Radiocarbon and δ13C data indicate a collapse in North Pacific Intermediate Water formation at the onset of the B/A, which, combined with enhanced wind stress curl, would have allowed CO2-rich waters to mix into the surface ocean from intermediate-depths. The combination of high nutrient availability and a seasonally well-stratified mixed layer likely led to the abrupt increase in export productivity across the region; the excess surface water CO2 shows that alleviation of iron or light limitation could not have been its primary cause. Our new records highlight the importance of overturning circulation in the North Pacific in controlling productivity and CO2 release on glacial/interglacial timescales.

77 FR 45508 - Fisheries off West Coast States; Pacific Coast Groundfish Fishery Management Plan; Trawl...

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2012-08-01

... for species caught incidentally in the whiting fishery (including lingcod, Pacific cod, canary... allocations. The process of ``holding'' back sufficient QP is similar to the current process of starting the...

Establishing demographic parameters for loggerhead turtles in the northeastern Pacific Ocean: growth rates, age determination, annual habitat use, and population connectivity

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Loggerhead turtles nesting in Japan (i.e. the source rookery for individuals along the U.S. West coast and Pacific Mexico) have recently been declared a Distinct...

Impact of the intraseasonal variability of large-scale circulation over the Western North Pacific on the characteristics of tropical cyclone track

OpenAIRE

Chen, T. C.; Wang, Shih-Yu (Simon); Yen, M. C.; Clark, A. J.

2009-01-01

The life cycle of the Southeast Asian–western North Pacific monsoon circulation is established by the northward migrations of the monsoon trough and the western Pacific subtropical anticyclone, and is reflected by the intraseasonal variations of mo nsoon westerlies and trad e easterlies in the form of an east–west seesaw oscillation. In this paper, an effort is made to disclose the influence of this monsoon circulation on tropical cyclone tracks during its different ph ases using composite ch...

Cetacean morbillivirus in coastal Indo-Pacific bottlenose dolphins, Western Australia.

Science.gov (United States)

Stephens, Nahiid; Duignan, Pádraig J; Wang, Jianning; Bingham, John; Finn, Hugh; Bejder, Lars; Patterson, Anthony P; Holyoake, Carly

2014-04-01

Cetacean morbillivirus (CeMV) has caused several epizootics in multiple species of cetaceans globally and is an emerging disease among cetaceans in Australia. We detected CeMV in 2 stranded coastal Indo-Pacific bottlenose dolphins (Tursiops aduncus) in Western Australia. Preliminary phylogenetic data suggest that this virus variant is divergent from known strains.

Cetacean Morbillivirus in Coastal Indo-Pacific Bottlenose Dolphins, Western Australia

OpenAIRE

Stephens, Nahiid; Duignan, Pádraig J.; Wang, Jianning; Bingham, John; Finn, Hugh; Bejder, Lars; Patterson, Anthony P.; Holyoake, Carly

2014-01-01

Cetacean morbillivirus (CeMV) has caused several epizootics in multiple species of cetaceans globally and is an emerging disease among cetaceans in Australia. We detected CeMV in 2 stranded coastal Indo-Pacific bottlenose dolphins (Tursiops aduncus) in Western Australia. Preliminary phylogenetic data suggest that this virus variant is divergent from known strains.

The Nova-Canton Trough and the Late Cretaceous evolution of the central Pacific

Science.gov (United States)

Joseph, Devorah; Taylor, Brain; Shor, Alexander N.; Yamazaki, Toshitsugu

Free-air gravity anomalies derived from satellite altimetry data show that the major Pacific fracture zones, from the Pau to Marquesas, are co-polar about an Euler pole located at 150.5°W, 34.6°S for the period preceding chron 33 and including a large portion of the Cretaceous Normal Superchron. They also show continuity of the Clipperton Fracture Zone through the Line Islands to the Nova-Canton ridge and trough; this Canton-Clipperton trend is co-polar to the same pole. Sidescan-sonar and bathymetry data in the Nova-Canton Trough region reveal N140°E-striking abyssal hill topography south of the N70°E-striking structures of the Nova-Canton Trough and crustal fabric striking normal to the trough (N160°E) to the north. We conclude that the Nova-Canton Trough is the Middle Cretaceous extension of the Clipperton Fracture Zone. We propose that the anomalous depths (7000-8400 m) of the trough between 167°30'-168°30'W are the result of a complex plate reorganization. Conjugate magnetic anomaly lineations M1-M3 in the Phoenix lineations between the Central Pacific Fracture Zone and the Phoenix Fracture Zone and the absence of lineations younger than anomaly M3 west of the Phoenix Fracture Zone suggest that spreading may have gradually ceased along the Pacific-Phoenix system from west to east. We infer that the remaining active segment of the Pacific-Phoenix spreading system after anomaly M1 time was the easternmost section of the Phoenix lineations. At ˜M0 time, the Pacific-Phoenix spreading axis stretched from lineated bathymetric depressions lying between 180°W and the Phoenix Islands to ˜168°W and included the western deep of the Nova-Canton Trough. We hypothesize that accretion terminated on the Pacific-Phoenix spreading axis shortly after M0 time and that the absence of an M0 isochron in the region between the eastern Phoenix lineations and the Nova-Canton Trough, or along the Nova-Canton Trough itself, may be due to a decrease in spreading rate prior to

Quantification of tsunami hazard on Canada's Pacific Coast; implications for risk assessment

Science.gov (United States)

Evans, Stephen G.; Delaney, Keith B.

2015-04-01

Our assessment of tsunami hazard on Canada's Pacific Coast (i.e., the coast of British Columbia) begins with a review of the 1964 tsunami generated by The Great Alaska Earthquake (M9.2) that resulted in significant damage to coastal communities and infrastructure. In particular, the tsunami waves swept up inlets on the west coast of Vancouver Island and damaged several communities; Port Alberni suffered upwards of 5M worth of damage. At Port Alberni, the maximum tsunami wave height was estimated at 8.2 m above mean sea level and was recorded on the stream gauge on the Somass River located at about 7 m a.s.l, 6 km upstream from its mouth. The highest wave (9.75 m above tidal datum) was reported from Shields Bay, Graham Island, Queen Charlotte Islands (Haida Gwaii). In addition, the 1964 tsunami was recorded on tide gauges at a number of locations on the BC coast. The 1964 signal and the magnitude and frequency of traces of other historical Pacific tsunamis (both far-field and local) are analysed in the Tofino tide gauge records and compared to tsunami traces in other tide gauges in the Pacific Basin (e.g., Miyako, Japan). Together with a review of the geological evidence for tsunami occurrence along Vancouver Island's west coast, we use this tide gauge data to develop a quantitative framework for tsunami hazard on Canada's Pacific coast. In larger time scales, tsunamis are a major component of the hazard from Cascadia megathrust events. From sedimentological evidence and seismological considerations, the recurrence interval of megathrust events on the Cascadia Subduction Zone has been estimated by others at roughly 500 years. We assume that the hazard associated with a high-magnitude destructive tsunami thus has an annual frequency of roughly 1/500. Compared to other major natural hazards in western Canada this represents a very high annual probability of potentially destructive hazard that, in some coastal communities, translates into high levels of local risk

Hemocyte parameters of the Pacific oyster Crassostrea gigas a year after the Hebei Spirit oil spill off the west coast of Korea

Science.gov (United States)

Donaghy, Ludovic; Hong, Hyun-Ki; Lee, Hee-Jung; Jun, Je-Cheon; Park, Young-Je; Choi, Kwang-Sik

2010-12-01

In marine bivalves, hemocytes support various physiological functions, including immune defense, nutrient transport, shell repair, and homeostatic maintenance. Although the effects of marine contaminants on the immunological functions of bivalves have been extensively investigated, the impacts of oil spills are not well understood. Therefore, we investigated hemocyte parameters in the Pacific oyster Crassostrea gigas 13 months after the Hebei Spirit oil spill (December 2007) off the west coast of Korea. The parameters studied included hemocyte concentration and mortality, relative proportion of hemocyte populations, and immunological functions such as phagocytosis and oxidative activity using flow cytometry. These immune-related parameters in oysters damaged by the oil spill were also compared to control oysters that were collected from an area unaffected by the spill. The flow cytometry study indicated that granulocyte population, phagocytic capacity, and reactive oxygen species production in oysters exposed to crude oil 13 months prior were depressed compared to the unexposed control oysters. Our data suggest that immunocompetence in oysters affected by the oil spill had not fully recovered 1 year after the accident, although more detailed studies on the physiology and disease resistance should be performed.

West Valley facility spent fuel handling, storage, and shipping experience

International Nuclear Information System (INIS)

Bailey, W.J.

1990-11-01

The result of a study on handling and shipping experience with spent fuel are described in this report. The study was performed by Pacific Northwest Laboratory (PNL) and was jointly sponsored by the US Department of Energy (DOE) and the Electric Power Research Institute (EPRI). The purpose of the study was to document the experience with handling and shipping of relatively old light-water reactor (LWR) fuel that has been in pool storage at the West Valley facility, which is at the Western New York Nuclear Service Center at West Valley, New York and operated by DOE. A subject of particular interest in the study was the behavior of corrosion product deposits (i.e., crud) deposits on spent LWR fuel after long-term pool storage; some evidence of crud loosening has been observed with fuel that was stored for extended periods at the West Valley facility and at other sites. Conclusions associated with the experience to date with old spent fuel that has been stored at the West Valley facility are presented. The conclusions are drawn from these subject areas: a general overview of the West Valley experience, handling of spent fuel, storing of spent fuel, rod consolidation, shipping of spent fuel, crud loosening, and visual inspection. A list of recommendations is provided. 61 refs., 4 figs., 5 tabs

Phylogeography of the sergeants Abudefduf sexfasciatus and A. vaigiensis reveals complex introgression patterns between two widespread and sympatric Indo-West Pacific reef fishes.

Science.gov (United States)

Bertrand, Joris A M; Borsa, Philippe; Chen, Wei-Jen

2017-05-01

On evolutionary timescales, sea level oscillations lead to recurrent spatio-temporal variation in species distribution and population connectivity. In this situation, applying classical concepts of biogeography is challenging yet necessary to understand the mechanisms underlying biodiversity in highly diverse marine ecosystems such as coral reefs. We aimed at studying the outcomes of such complex biogeographic dynamics on reproductive isolation by sampling populations across a wide spatial range of a species-rich fish genus: the sergeants (Pomacentridae: Abudefduf). We generated a mutlilocus data set that included ten morpho-species from 32 Indo-West Pacific localities. We observed a pattern of mito-nuclear discordance in two common and widely distributed species: Abudefduf sexfasciatus and Abudefduf vaigiensis. The results showed three regional sublineages (Indian Ocean, Coral Triangle region, western Pacific) in A. sexfasciatus (0.6-1.5% divergence at cytb). The other species, A. vaigiensis, is polyphyletic and consists of three distinct genetic lineages (A, B and C) (9% divergence at cytb) whose geographic ranges overlap. Although A. vaigiensis A and A. sexfasciatus were found to be distinct based on nuclear information, A. vaigiensis A was found to be nested within A. sexfasciatus in the mitochondrial gene tree. A. sexfasciatus from the Coral Triangle region and A. vaigiensis A were not differentiated from each other at the mitochondrial locus. We then used coalescent-based simulation to characterize a spatially widespread but weak gene flow between the two species. We showed that these fishes are good candidates to investigate the evolutionary complexity of the discrepancies between phenotypic and genetic similarity in closely related species. © 2017 John Wiley & Sons Ltd.

Impacts of the Tropical Pacific Cold Tongue Mode on ENSO Diversity Under Global Warming

Science.gov (United States)

Li, Yang; Li, Jianping; Zhang, Wenjun; Chen, Quanliang; Feng, Juan; Zheng, Fei; Wang, Wei; Zhou, Xin

2017-11-01

The causes of ENSO diversity, although being of great interest in recent research, do not have a consistent explanation. This study provides a possible mechanism focused on the background change of the tropical Pacific as a response to global warming. The second empirical orthogonal function mode of the sea surface temperature anomalies (SSTA) in the tropical Pacific, namely the cold tongue mode (CTM), represents the background change of the tropical Pacific under global warming. Using composite analysis with surface observations and subsurface ocean assimilation data sets, we find ENSO spatial structure diversity is closely associated with the CTM. A positive CTM tends to cool the SST in the eastern equatorial Pacific and warm the SST outside, as well as widen (narrow) zonal and meridional scales for El Niño (La Niña), and vice versa. Particularly in the positive CTM phase, the air-sea action center of El Niño moves west, resembling the spatial pattern of CP-El Niño. This westward shift of center is related to the weakened Bjerknes feedback (BF) intensity by the CTM. By suppressing the SSTA growth of El Niño in the eastern equatorial Pacific, the CTM contributes to more frequent occurrence of CP-El Niño under global warming.

Epidemiology of West Nile in Europe and in the Mediterranean Basin

OpenAIRE

Calistri, Paolo; Giovannini, Armando; Hubalek, Zdenek; Ionescu, Aurelia; Monaco, Federica; Savini, Giovanni; Lelli, Rossella

2010-01-01

In the last 30 years several cases of West Nile (WN) virus infection were reported in horses and humans in Europe and in the Mediterranean Basin. Most of them were determined by strains of the Lineage 1 included in the European Mediterranean/Kenyan cluster. Strains of this cluster are characterised by a moderate pathogenicity for horses and humans and limited or no pathogenicity for birds. In recent years, however, WN cases determined by strains grouped in the Israeli/American cluster of Line...

Cetacean Morbillivirus in Coastal Indo-Pacific Bottlenose Dolphins, Western Australia

Science.gov (United States)

Duignan, Pádraig J.; Wang, Jianning; Bingham, John; Finn, Hugh; Bejder, Lars; Patterson, Anthony P.; Holyoake, Carly

2014-01-01

Cetacean morbillivirus (CeMV) has caused several epizootics in multiple species of cetaceans globally and is an emerging disease among cetaceans in Australia. We detected CeMV in 2 stranded coastal Indo-Pacific bottlenose dolphins (Tursiops aduncus) in Western Australia. Preliminary phylogenetic data suggest that this virus variant is divergent from known strains. PMID:24656203

Predicting Waves in the Pacific Northwest of the US

Science.gov (United States)

Ozkan-Haller, H. T.; Oskamp, J. A.; Garcia, G.; Kassem, S.; McNutt, J.

2010-12-01

The Pacific Northwest region of the US is characterized by an energetic deep water wave climate with large swell and sea waves that can approach from multiple directions. As these waves propagate from the open ocean over the continental shelf towards shore, they are affected by the underwater topography (or bathymetry) of the shelf. The US West Coast shelf is characterized by complicated bathymetry with numerous canyons and large banks. Such features can at places focus wave energy and at others divert waves away. As a result the wave field near the coast (in 10-50m water depth) varies significantly along the coast. Although a comprehensive prediction and validation effort for waves exists for the California shoreline, it is currently lacking for the Pacific Northwest shorelines. Herein, we present comprehensive long-term wave model simulations for several regions within the Oregon coastline, show validation of the results with existing nearshore observations, and discuss the dominant dynamics responsible for the observed wave transformation.

Tomography of the subducting Pacific slab and the 2015 Bonin deepest earthquake (Mw 7.9)

Science.gov (United States)

Zhao, Dapeng; Fujisawa, Moeto; Toyokuni, Genti

2017-03-01

On 30 May 2015 an isolated deep earthquake (~670 km, Mw 7.9) occurred to the west of the Bonin Islands. To clarify its causal mechanism and its relationship to the subducting Pacific slab, we determined a detailed P-wave tomography of the deep earthquake source zone using a large number of arrival-time data. Our results show that this large deep event occurred within the subducting Pacific slab which is penetrating into the lower mantle. In the Izu-Bonin region, the Pacific slab is split at ~28° north latitude, i.e., slightly north of the 2015 deep event hypocenter. In the north the slab becomes stagnant in the mantle transition zone, whereas in the south the slab is directly penetrating into the lower mantle. This deep earthquake was caused by joint effects of several factors, including the Pacific slab’s fast deep subduction, slab tearing, slab thermal variation, stress changes and phase transformations in the slab, and complex interactions between the slab and the ambient mantle.

Shifts in Mycobacterial Populations and Emerging Drug-Resistance in West and Central Africa.

Directory of Open Access Journals (Sweden)

Florian Gehre

Full Text Available In this study, we retrospectively analysed a total of 605 clinical isolates from six West or Central African countries (Benin, Cameroon, Central African Republic, Guinea-Conakry, Niger and Senegal. Besides spoligotyping to assign isolates to ancient and modern mycobacterial lineages, we conducted phenotypic drug-susceptibility-testing for each isolate for the four first-line drugs. We showed that phylogenetically modern Mycobacterium tuberculosis strains are more likely associated with drug resistance than ancient strains and predict that the currently ongoing replacement of the endemic ancient by a modern mycobacterial population in West/Central Africa might result in increased drug resistance in the sub-region.

Modulation of the intraseasonal Indo-western Pacific convection oscillation to tropical cyclogenesis location and frequency over the Indo-western North Pacific during boreal extended summer

Science.gov (United States)

Wang, Qiuyun; Li, Jianping; Li, Yanjie; Zhang, Jingwen

2017-04-01

The influence of the intraseasonal Indo-western Pacific convection oscillation (IPCO) on the tropical cyclone (TC) genesis location and frequency over the Indo-western North Pacific during the boreal extended summer (May-October) is explored in this paper. Observational analysis shows that the impacts of the intraseasonal IPCO on TCs over the Indo-western North Pacific features in evident "locational phase lock of TC genesis" and distinct differences in TC frequency. In term of the WNP, when the intraseasonal IPCO is positive phase, there tends to be much more TCs, especially in the South China Sea (SCS), and more TCs generate in the west of the WNP and lower latitude (around 5°-20°N); vice versa. At the positive intraseasonal IPCO phase, the atmosphere gains heat through both sea-air interaction and the latent heat release of cumulus convective condensation, and the anomalous cyclonic circulation weakens the western Pacific subtropical high (WPSH), these conditions do favor the TC genesis. Moreover, the shrinking WPSH, the enhanced heat transfer from sea to air at the lower latitude as well as the westward shifts of heating center and anomalous cyclonic circulation lock TC genesis locations in the west of the WNP and lower latitude. The opposite situation occurs at negative phase. As for the North Indian Ocean (NIO), the TC genesis locations at the positive intraseasonal IPCO phase mainly situate in 13°-20°N and distribute closer to Indian Peninsula, particularly in the Arabian Sea (ARB), in contrast, the spatial distribution is more dispersed at the negative intraseasonal IPCO phase. However, the total TC frequencies at two intraseasonal IPCO phases are similar. These features come largely from the differences in the area featuring conditions between the northern and southern regions of 13°N in the NIO: at the positive intraseasonal IPCO phase, to the northern region of 13°N, the environmental conditions are similar to the case of the WNP except without the

AIDS wanes in West, grows in Africa and Asia.

Science.gov (United States)

Worldwide, at least 22 million people have been infected with HIV. The overwhelming majority of these cases, however, are in sub-Saharan Africa, Thailand, and India; approximately 15-20 million people are infected with the total number rapidly increasing. Approximately two million people are infected in the West, and the rate and extent of HIV infection are either plateauing or decreasing. In the West, HIV is contracted primarily through homosexual contact and IV drug use. HIV1-B is the prevalent strain of HIV in such settings. HIV in South Asia and sub-Saharan Africa, however, is mainly transmitted through heterosexual contact and consists of HIV-1 strains A, C, and E. There are therefore two distinct HIV epidemics taking place. Professor Max Essex of the Harvard AIDS Institute noted in his address at a conference on infectious diseases in New Delhi, India, that most planned vaccines and therapy for AIDS were developed in the West and thus targeted to combat HIV1-B. It seems likely, however, that other HIV subtypes will also take hold in the West and that an heterosexual epidemic of considerable magnitude should be anticipated. The high rate of HIV genetic mutation is of concern for both AIDS prevention and treatment. Essex further pointed out that the growing cost of treating AIDS patients with increasingly long lives has prompted a shift in the core of AIDS research from therapy to prevention. That levels of awareness about HIV/AIDS and the extent of sex education among youth are higher in more developed countries compared to in developing countries may play a role in the relatively lower incidence of new HIV cases in the West.

Recovery of wild Pacific oyster, Crassostrea gigas in terms of reproduction and gametogenesis two-years after the Hebei Spirit Oil Spill Accident off the West Coast of Korea

Science.gov (United States)

Mondol, Mostafizur Rahman; Keshavmurthy, Shashank; Lee, Hee-Jung; Hong, Hyun-Ki; Park, Heung-Sik; Park, Sang-Rul; Kang, Chang-Keun; Choi, Kwang-Sik

2015-12-01

The Hebei Spirit oil spill in December 2007 at Taean off the west coast of Korea was the largest oil tanker accident in Korea. However, the impact of the spill on physiology of benthic animals remains largely unknown. Two-years after the accident, we compared reproductive effort and annual gametogenesis of the wild Pacific oyster Crassostrea gigas, residing at oil spill site with a control oyster population in Incheon Bay, North-West coast of Korea. Results showed that the oyster sampled from the oil spill site showed a significantly higher (279.0 mg standard animal-1, Pgametogenic pattern between the two populations, and most of the females of both populations spawned between August and September. During spawning season, egg mass of oysters determined using enzyme-linked immunosorbant assay (ELISA) in the oil spill area was significantly higher (136.3 mg standard animal-1, P<0.05) than the control population (120.5 mg standard animal-1, P<0.05). The tissue protein level in the oysters at the contaminated area was significantly higher (102.6 mg standard animal-1, P<0.05) than the level measured from the control oysters (81.4 mg standard animal-1, P<0.05). The observed better biological performances of oysters at the contaminated site suggested their recovery of the physiological status to normal level after two years of the oil spill accident.

PNNL Stress/Strain Correlation for Zircaloy

Energy Technology Data Exchange (ETDEWEB)

Geelhood, Kenneth J.; Beyer, Carl E.; Luscher, Walter G.

2008-07-18

Pacific Northwest National Laboratory (PNNL) was tasked with incorporating cladding mechanical property data into the Nuclear Regulatory Commission (NRC) fuel codes, FRAPCON-31 and FRAPTRAN2, by the NRC Office of Nuclear Reactor Research. The objective of that task was to create a mechanical model that can calculate true stress, true strain, and the possible failure of the fuel rod cladding based on uniaxial test data.

Safety evaluation for packaging (onsite) for the Pacific Northwest National Laboratory HEPA filter box

International Nuclear Information System (INIS)

McCoy, J.C.

1998-01-01

This safety evaluation for packaging (SEP) evaluates and documents the safe onsite transport of eight high-efficiency particulate air (HEPA) filters in the Pacific Northwest National Laboratory HEPA Filter Box from the 300 Area of the Hanford Site to the Central Waste Complex and on to burial in the 200 West Area. Use of this SEP is authorized for 1 year from the date of release

NEON Collaborative Data Collection Campaign at Pacific South West Site in California

Science.gov (United States)

Kampe, T. U.; Leisso, N.; Krause, K.; Musinsky, J.; Petroy, S. B.; Wasser, L. A.; Cawse-Nicholson, K.; van Aardt, J. A.; Schaaf, C.; Strahler, A. H.; Serbin, S. P.

2013-12-01

The National Ecological Observatory Network (NEON) is a continental-scale observatory that will collect biological, chemical and geophysical data over the continental United States in order to study biodiversity, landcover change, climate change and invasive species. In June 2013, a large-scale data collection took place over NEON's Pacific South West (PSW) site 17 in CA, USA. Data were collected in the San Joaquin Experimental Range and the Sierra National Forest. NEON's AOP (Airborne Observation Platform) acquired high spatial resolution hyperspectral data (~1m pixels), waveform lidar, discrete lidar, and RGB imagery over all three sites. A field team simultaneously collected atmospheric and vegetation inventory data, including tree locations, height, diameter-at-breast-height (DBH), species, and spectral data. The NEON collect was centered within a collaboration of multiple research entities, including NASA, Rochester Institute of Technology (RIT), University of Massachusetts (Boston; UMB, and Lowell; UML), Boston University (BU), and the University of Wisconsin, Madison (UWM). NASA's AVIRIS and MASTER sensors were flown over a wider area encompassing the NEON sites, with AVIRIS acquiring hyperspectral data (224 bands) at approximately 30m spatial resolution, and MASTER acquiring multispectral thermal data (50 bands) at approximately 50m spatial resolution. These data will be downscaled to approximate theoretical HyspIRI data (60m spatial resolution) as part of a large collection of preparatory research. Concurrently, a variety of university teams were active in the field: RIT collected ground-based lidar, leaf area index (LAI), herbaceous biomass measurements, wide-angle photographs, and spectral measurements. Data were collected over 20 80x80m sites, centered on existing 20x20m NEON sites. This data set will be used to inform synthetic scene design and to study the impact of sub-pixel structural variation on pixel-level spectral response; The BU, UMB, and UML

14C AMS dates on Rattus exulans bones from natural and archaeological contexts on Norfolk Island, south-west Pacific

International Nuclear Information System (INIS)

Holdaway, R.N.; Anderson, A.J.

1998-01-01

The Pacific rat (Rattus exulans) was transported throughout the western Pacific by migrant peoples in prehistory. Meredith et al (1985) reported a minimum date for the presence of Rattus exulans on Norfolk Island using dates on charcoal from an apparently enclosing layer (the upper part of their Unit C4) in Cemetery Bay. 8 refs., 3 tabs

Functions and Requirements for West Valley Demonstration Project Tank Lay-up

International Nuclear Information System (INIS)

Elmore, Monte R.; Henderson, Colin

2002-01-01

Documents completion of Milestone A.1-1, ''Issue Functions and Requirements for WVDP Tank Lay-Up,'' in Technical Task Plan TTP RL3-WT21A - ''Post-Retrieval and Pre-Closure HLW Tank Lay-Up.'' This task is a collaborative effort among Pacific Northwest National Laboratory, Jacobs Engineering Group Inc., and West Valley Nuclear Services (WVNS). Because of the site-specific nature of this task, the involvement of WVNS personnel is critical to the success of this task

Imperial Queerness: The U.S. Homophile Press and Constructions of Sexualities in Asia and the Pacific, 1953-1964.

Science.gov (United States)

Simpson, Carly

2017-01-01

This essay examines the ways in which U.S. homophile magazines represented and constructed Asia and the Pacific from 1953 to 1964. Through an analysis of 209 items that referenced Asia and the Pacific in ONE, Mattachine Review, and the Ladder, the essay argues that U.S. homophiles referenced the region in three primary ways: first, to create relationships, allies, and exchanges with people living in the region; second, to highlight the inferiority of the East and superiority of the West; and, third, to reveal the cross-cultural and transhistorical nature of homosexuality. These references were influenced by Orientalism, colonialism, and the Cold War, which framed Asia and the Pacific as both sexually and culturally backward, but also as a potential tourist destination for gay men and lesbian women.

75 FR 61102 - Magnuson-Stevens Act Provisions; Fisheries Off West Coast States; Pacific Coast Groundfish...

Science.gov (United States)

2010-10-04

... opportunities to harvest available healthy stocks and meet the objective of the Pacific Coast Groundfish FMP to... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration 50 CFR Part 660 [Docket No... Coast Groundfish Fishery; Inseason Adjustments to Fishery Management Measures AGENCY: National Marine...

78 FR 75268 - Fisheries Off West Coast States; Pacific Coast Groundfish Fishery; Trawl Rationalization Program...

Science.gov (United States)

2013-12-11

... Rationalization Program; Cost Recovery AGENCY: National Marine Fisheries Service (NMFS), National Oceanic and... recovery program for the Pacific coast groundfish trawl rationalization program, as required by the...). Allocations to the limited entry trawl fleet for certain species were developed through a parallel process...

78 FR 56641 - Fisheries Off West Coast States; Pacific Coast Groundfish Fishery Management Plan; Commercial...

Science.gov (United States)

2013-09-13

... rationalization program, including the shorebased IFQ program, was intended to increase net economic benefits, create individual economic stability, provide full utilization of the trawl sector allocation, consider..., Pacific cod and yellowtail rockfish and would likely have a favorable economic impact to groundfish...

Macrophthalmus graeffei A. Milne Edwards, 1873 (Crustacea: Brachyura: Macrophthalmidae: a new Indo-Pacific guest off Rhodes Island (SE Aegean Sea, Greece

Directory of Open Access Journals (Sweden)

M.A. PANCUCCI-PAPADOPOULOU

2010-05-01

Full Text Available A new alien crab, the macrophthalmid Macrophthalmus graeffei, is reported from the eastern coastline of Rhodes Island. The species, of Indo-West Pacific origin, is known from muddy sediments up to about 80 m depth. In the Mediterranean, its presence has been observed along Levantine coasts as well as along the Turkish coast of the Aegean Sea.Macrophthalmus graeffei increases to twelve the number of alien brachyurans present in the Hellenic SE Aegean Sea, ten of them having Indo-Pacific origin.

78 FR 7371 - Fisheries Off West Coast States; Pacific Coast Groundfish Fishery; Trawl Rationalization Program...

Science.gov (United States)

2013-02-01

... Rationalization Program; Cost Recovery AGENCY: National Marine Fisheries Service (NMFS), National Oceanic and... Office rule goes final before the cost recovery program rule and if it would affect the appeals process... would implement a cost recovery program for the Pacific coast groundfish trawl rationalization program...

Probiotic research in Australia, New Zealand and the Asia-Pacific region.

Science.gov (United States)

Crittenden, R; Bird, A R; Gopal, P; Henriksson, A; Lee, Y K; Playne, M J

2005-01-01

Although the epicentres of probiotic research in the past decade have been Japan and Europe, researchers in the Asia-Pacific region have actively contributed to the growing understanding of the intestinal microbial ecosystem, and interactions between gut bacteria, diet and health of the human host. A number of new probiotic strains have been developed in the region that have been demonstrated to have beneficial impacts on health in animal and human trials, including improved protection against intestinal pathogens and modulation of the immune system. Probiotics targeted to animals, including aquaculture, feature heavily in many Asian countries. Developments in probiotic technologies have included microencapsulation techniques, antimicrobial production in fermented meats, and synbiotic combinations. In particular, the impact of resistant starch on the intestinal environment and fermentation by intestinal bacteria has been intensively studied and new probiotic strains selected specifically for synbiotic combinations with resistant starch. This paper provides an overview of probiotic research within Australia, New Zealand and a number of Asian countries, and lists scientists in the Asia-Pacific region involved in various aspects of probiotic research and development.

A Comprehensive Approach to Bi-National Regional Energy Planning in the Pacific Northwest

Energy Technology Data Exchange (ETDEWEB)

Matt Morrison

2007-12-31

The Pacific NorthWest Economic Region, a statutory organization chartered by the Northwest states of Alaska, Washington, Idaho, Montana, and Oregon, and the western Canadian provinces of British Columbia, Alberta, and the Yukon through its Energy Working Group launched a bi-national energy planning initiative designed to create a Pacific Northwest energy planning council of regional public/private stakeholders from both Canada and the US. There is an urgent need to deal with the comprehensive energy picture now before our hoped for economic recovery results in energy price spikes which are likely to happen because the current supply will not meet predicted demand. Also recent events of August 14th have shown that our bi-national energy grid system is intricately interdependent, and additional planning for future capacity is desperately needed.

Anthropogenic 236U recorded in annually banded coral skeleton at Majuro atoll, the equatorial Pacific

International Nuclear Information System (INIS)

Sakaguchi, Aya; Eto, Asuka; Takahashi, Yoshio; Steier, Peter; Yamazaki, Atsuko; Watanabe, Tsuyoshi; Sasaki, Keiichi; Yamano, Hiroya

2013-01-01

Historical 236 U/ 238 U atom ratio and concentration of 236 U were determined by Accelerator Mass Spectrometry (AMS) in skeletons of dated modern coral core sample collected from Majuro atoll, equatorial Pacific, to reconstruct anthropogenic 236 U inputs to the Equatorial Pacific. The maximum hydrogen bomb-pulses of 236 U/ 238 U and 236 U concentration, 2.83x10 -9 and 1.85x10 7 atom/g, in an annually resolved coral core were captured in 1954 (Operation Castle at Bikini and Enewetok atolls). The values were abruptly decreased in a few years, and they have been gradually decreased over time. Our results allow studies of not only the present distribution pattern, but gives access to the temporal evolution of 236 U in surface seawater of North Equatorial Current which is introduced to the Japan Sea and the North West Pacific Ocean as Kuroshio and Tsushima currents over the past decades. (author)

First record in the Tropical Eastern Pacific of the exotic species Ficopomatus uschakovi (Polychaeta, Serpulidae

Directory of Open Access Journals (Sweden)

Rolando Bastida Zavala

2012-11-01

Full Text Available The exotic Indo-West-Pacific species, Ficopomatus uschakovi (Polychaeta, Serpulidae is recorded for the first time in the Tropical Eastern Pacific from two sites in La Encrucijada Biosphere Reserve, Chiapas, a coastal lagoon in the Pacific south of Mexico. The means of dispersal of this serpulid species still remains unclear, as the nearest port (Puerto Chiapas is 70 km to the south, and there are no port installations or shrimp cultures in the lagoon. The record of this serpulid species, apparently widely distributed in this coastal lagoon, has implications regarding possible effects on the brackish-water ecosystem, since the invasion event very well may have occurred several years ago. It is recommended that an exhaustive study be carried out in the coastal lagoons of Chiapas to evaluate the real distribution and the effects of this invasive species on the ecosystem. A complete description, including photographs and drawings, is provided.

76 FR 38313 - Magnuson-Stevens Act Provisions; Fisheries Off West Coast States; Pacific Coast Groundfish...

Science.gov (United States)

2011-06-30

... are available, preventing additional harvest in fisheries that are important to coastal communities... document and undergo proposed and final rulemaking before these actions need to be in effect. For the... delay could impair achievement of one of the Pacific Coast Groundfish FMP goals to prevent overfishing...

77 FR 28497 - Magnuson-Stevens Act Provisions; Fisheries Off West Coast States; Pacific Coast Groundfish...

Science.gov (United States)

2012-05-15

... decrease in estimated current abundance from the prior assessment. The SRG met in Seattle, Washington, from... that the current modeling approach, which implements a relatively simple base case in the Stock...[deg] N. lat. The 2012 allocations of Pacific Ocean perch, canary rockfish, darkblotched rockfish, and...

A new species of deep-sea sponge-associated shrimp from the North-West Pacific (Decapoda, Stenopodidea, Spongicolidae).

Science.gov (United States)

Xu, Peng; Zhou, Yadong; Wang, Chunsheng

2017-01-01

A new species of the deep-sea spongicolid genus Spongicoloides Hansen, 1908 is described and illustrated based on material from the northwestern Pacific. Spongicoloides weijiaensis sp. n. was found inside a hexactinellid sponge, Euplectella sp., sampled by the Chinese manned submersible "Jiaolong" at depths of 2279 m near the Weijia Guyot, in the Magellan Seamount Chain. The new species can be distinguished from all congeneric species by several morphological features, involving gill formula, spination of the carapace, antennal scale, third pereiopod, telson and uropod, posteroventral teeth of the pleura, and dactyli of the fourth and fifth pereiopods. An identification key to the Pacific species of Spongicoloides is provided.

First molecular analysis of West Nile virus during the 2013 outbreak in Croatia.

Science.gov (United States)

Kurolt, Ivan C; Krajinović, Vladimir; Topić, Antea; Kuzman, Ilija; Baršić, Bruno; Markotić, Alemka

2014-08-30

This is the second subsequent year of West Nile neuroinvasive disease (WNND) outbreak in Croatia. Between July and October 2013, 22 patients presented with symptoms of WNND: all with meningitis and 18 additionally with encephalitis. In contrast to 2012, where six autochthonous infections were confirmed in eastern Croatia, the majority of this year's cases occurred in and around the city of Zagreb, where no West Nile virus infections have been observed before. Viral RNA was recovered from two patients and phylogenetic analyses revealed West Nile virus lineage 2. This represents the first molecular characterization and phylogenetic analysis of the circulating West Nile virus strain in Croatia. Copyright © 2014 Elsevier B.V. All rights reserved.

Laboratory work in support of West Valley glass development

International Nuclear Information System (INIS)

Bunnell, L.R.

1988-05-01

Over the past six years, Pacific Northwest Laboratory (PNL) has conducted several studies in support of waste glass composition development and testing of glass compositions suitable for immobilizing the nuclear wastes stored at West Valley, New York. As a result of pilot-scale testing conducted by PNL, the glass composition was changed from that originally recommended in response to changes in the waste stream, and several processing-related problems were discovered. These problems were solved, or sufficiently addressed to determine their likely effect on the glass melting operations to be conducted at West Valley. This report describes the development of the waste glass composition, WV-205, and discusses solutions to processing problems such as foaming and insoluble sludges, as well as other issues such as effects of feed variations on processing of the resulting glass. An evaluation of the WV-205 glass from a repository perspective is included in the appendix to this report

Pacific Basin Heavy Oil Refining Capacity

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David Hackett

2013-02-01

Full Text Available The United States today is Canada’s largest customer for oil and refined oil products. However, this relationship may be strained due to physical, economic and political influences. Pipeline capacity is approaching its limits; Canadian oil is selling at substantive discounts to world market prices; and U.S. demand for crude oil and finished products (such as gasoline, has begun to flatten significantly relative to historical rates. Lower demand, combined with increased shale oil production, means U.S. demand for Canadian oil is expected to continue to decline. Under these circumstances, gaining access to new markets such as those in the Asia-Pacific region is becoming more and more important for the Canadian economy. However, expanding pipeline capacity to the Pacific via the proposed Northern Gateway pipeline and the planned Trans Mountain pipeline expansion is only feasible when there is sufficient demand and processing capacity to support Canadian crude blends. Canadian heavy oil requires more refining and produces less valuable end products than other lighter and sweeter blends. Canadian producers must compete with lighter, sweeter oils from the Middle East, and elsewhere, for a place in the Pacific Basin refineries built to handle heavy crude blends. Canadian oil sands producers are currently expanding production capacity. Once complete, the Northern Gateway pipeline and the Trans Mountain expansion are expected to deliver an additional 500,000 to 1.1 million barrels a day to tankers on the Pacific coast. Through this survey of the capacity of Pacific Basin refineries, including existing and proposed facilities, we have concluded that there is sufficient technical capacity in the Pacific Basin to refine the additional Canadian volume; however, there may be some modifications required to certain refineries to allow them to process Western Canadian crude. Any additional capacity for Canadian oil would require refinery modifications or

77 FR 29955 - Fisheries Off West Coast States; Pacific Coast Groundfish Fishery Management Plan; Trawl...

Science.gov (United States)

2012-05-21

..., and for species caught incidentally in the whiting fishery (including lingcod, Pacific cod, canary..., depending on the formula used, there may be new QS permit owners, while some current QS permit owners who.... The current regulations give QS permit owners with excess QS two years after QS transfer begins to...

Oceanic upwelling and productivity in the eastern tropical Pacific

International Nuclear Information System (INIS)

Fiedler, P.C.; Philbrick, V.; Chavez, F.P.

1991-01-01

An oceanographic survey of the eastern tropical Pacific Ocean in August-November 1990 found a productive, nutrient-rich, moderately high-chlorophyll surface layer in two oceanic upwelling regions: the equatorial divergence, especially east of the Galapagos, and the countercurrent divergence out to 105 degree W, > 1,000 km west of the Costa Rica Dome. Although NO 3 is not depleted in upwelling regions, relationships among nutrient concentrations and temperature in 1986-1988 data from the same area show that NO 3 is the first macronutrient to be depleted in adjacent, less-productive regions. A three-dimensional, two-layer box model of NO 3 flux within and into the euphotic zone gives estimated rates of new production that are ∼29% of measured rates of 14 C phytoplankton production. Persistence of excess NO 3 in the euphotic zone exceeds 1 yr under high-nutrient, low-chlorophyll conditions off the equator where weak upwelling, or downwelling, occurs. These results indicate substantial control or limitation of NO 3 utilization and productivity in nutrient-rich oceanic regions of the eastern tropical Pacific

A new species of deep-sea sponge-associated shrimp from the North-West Pacific (Decapoda, Stenopodidea, Spongicolidae

Directory of Open Access Journals (Sweden)

Peng Xu

2017-07-01

Full Text Available A new species of the deep-sea spongicolid genus Spongicoloides Hansen, 1908 is described and illustrated based on material from the northwestern Pacific. Spongicoloides weijiaensis sp. n. was found inside a hexactinellid sponge, Euplectella sp., sampled by the Chinese manned submersible “Jiaolong” at depths of 2279 m near the Weijia Guyot, in the Magellan Seamount Chain. The new species can be distinguished from all congeneric species by several morphological features, involving gill formula, spination of the carapace, antennal scale, third pereiopod, telson and uropod, posteroventral teeth of the pleura, and dactyli of the fourth and fifth pereiopods. An identification key to the Pacific species of Spongicoloides is provided.

Swimming depth of migrating silver eels Anguilla japonica released at seamounts of the West Mariana Ridge, their estimated spawning sites

OpenAIRE

Aoyama, J.; Hissmann, Karen; Yoshinaga, T.; Sasai, S.; Uto, T.; Ueda, H.

1999-01-01

Five hormone-treated female Japanese silver eels Anguilla japonica were tagged with ultrasonic transmitters and released by submersible in the West Pacific at seamounts of the West Mariana Ridge, their supposed spawning grounds. Four eels were tracked for 60 to 423 min in the vicinity of the seamounts. They did not settle at the seamounts but swam at a mean speed of 0.37 m s-1 into open water above deep ground. Their mean swimming depth ranged from 81 to 172 m. Experiments suggest that pre-ma...

75 FR 78343 - Fisheries Off West Coast States; Pacific Coast Groundfish Fishery Management Plan; Amendments 20...

Science.gov (United States)

2010-12-15

... increase net economic benefits, create individual economic stability, provide full utilization of the trawl... economic benefits and create individual economic stability. Response. Start dates for the Pacific whiting... net economic benefits, create economic stability, provide full utilization of the trawl sector...

The eastern Pacific species of Bathygobius (Perciformes: Gobiidae).

Science.gov (United States)

Miller, P J; Stefanni, S

2001-07-01

The circumtropical gobiid genus Bathygobius Bleeker is defined and three Eastern Pacific species are redescribed, with first dorsal fin pattern and postorbital blotches being shown to be additional characters of diagnostic value. Two mainland species are recognised, the Mexican-Panamanian B. ramosus Ginsburg 1947 and the Panamanian B. andrei (Sauvage 1880). B. ramosus is now reported from Clarión Island, Revillagigedos, and also from Cocos Island. Meristic variation of ramosus is tabulated for local populations and PCA analysis of their morphometry suggests regional differentiation in this species, with Tres Marias and Revillagigedos populations clustering away from mainland and Montuosa material. An insular species, B. lineatus (Jenyns 1842) from the Galapagos is defined, with B. arundelii (Garman 1899) from Clipperton Island and B. l. lupinus Ginsburg 1947 from Lobos de Afuera, off Peru, placed as nominal subspecies of lineatus. This species resembles the Indo-west Pacific B. fuscus and Atlantic basin B. soporator more closely than it does ramosus and andrei and may be the product of transpacific dispersal. A similar origin for B. ramosus is discussed but it seems more likely that both B. ramosus and B. andrei have Caribbean sister species.

Playing jigsaw with Large Igneous Provinces—A plate tectonic reconstruction of Ontong Java Nui, West Pacific

Science.gov (United States)

Hochmuth, Katharina; Gohl, Karsten; Uenzelmann-Neben, Gabriele

2015-11-01

The three largest Large Igneous Provinces (LIP) of the western Pacific—Ontong Java, Manihiki, and Hikurangi Plateaus—were emplaced during the Cretaceous Normal Superchron and show strong similarities in their geochemistry and petrology. The plate tectonic relationship between those LIPs, herein referred to as Ontong Java Nui, is uncertain, but a joined emplacement was proposed by Taylor (2006). Since this hypothesis is still highly debated and struggles to explain features such as the strong differences in crustal thickness between the different plateaus, we revisited the joined emplacement of Ontong Java Nui in light of new data from the Manihiki Plateau. By evaluating seismic refraction/wide-angle reflection data along with seismic reflection records of the margins of the proposed "Super"-LIP, a detailed scenario for the emplacement and the initial phase of breakup has been developed. The LIP is a result of an interaction of the arriving plume head with the Phoenix-Pacific spreading ridge in the Early Cretaceous. The breakup of the LIP shows a complicated interplay between multiple microplates and tectonic forces such as rifting, shearing, and rotation. Our plate kinematic model of the western Pacific incorporates new evidence from the breakup margins of the LIPs, the tectonic fabric of the seafloor, as well as previously published tectonic concepts such as the rotation of the LIPs. The updated rotation poles of the western Pacific allow a detailed plate tectonic reconstruction of the region during the Cretaceous Normal Superchron and highlight the important role of LIPs in the plate tectonic framework.

Overlap of eastern and western mangroves in the South-western Pacific: hybridization of all three Rhizophora (Rhizophoraceae) combinations in New Caledonia

NARCIS (Netherlands)

Duke, N.C.

2010-01-01

A recent survey of mangroves in New Caledonia located 7 taxa of the genus Rhizophora – with 6 coexisting in one estuary. This is arguably the greatest concentration of co-occurring Rhizophora taxa anywhere. Two are well-known mangrove species of the Indo West Pacific, R. stylosa and R. apiculata,

Genetic analysis of Saccharomyces cerevisiae strains isolated from palm wine in eastern Nigeria. Comparison with other African strains.

Science.gov (United States)

Ezeronye, O U; Legras, J-L

2009-05-01

To study the yeast diversity of Nigerian palm wines by comparison with other African strains. Twenty-three Saccharomyces cerevisiae strains were obtained from palm wine samples collected at four locations in eastern Nigeria, and characterized using different molecular techniques: internal transcribed spacer restriction fragment length polymorphism and sequence analysis, pulsed field gel electrophoresis, inter delta typing and microsatellite multilocus analysis. These techniques revealed that palm wine yeasts represent a group of closely related strains that includes other West African isolates (CBS400, NCYC110, DVPG6044). Population analysis revealed an excess of homozygote strains and an allelic richness similar to wine suggestive of local domestication. Several other African yeast strains were not connected to this group. Ghana sorghum beer strains and other African strains (DBVPG1853 and MUCL28071) displayed strikingly high relatedness with European bread, beer or wine strains, and the genome of strain MUCL30909 contained African and wine-type alleles, indicating its hybrid origin. Nigerian palm wine yeast represents a local specific yeast flora, whereas a European origin or hybrid was suspected for several other Africa isolates. This study presents the first genetic characterization of an autochthonous African palm wine yeast population and confirms the idea that human intervention has favoured yeast migration.

Response to UVB radiation and oxidative stress of marine bacteria isolated from South Pacific Ocean and Mediterranean Sea.

Science.gov (United States)

Matallana-Surget, S; Villette, C; Intertaglia, L; Joux, F; Bourrain, M; Lebaron, P

2012-12-05

Marine bacterial strains isolated from South Pacific and Mediterranean Sea were studied for their resistance to UVB radiation, their repair capacity under photoreactivating light, as well as their oxidative stress response using concentrated hydrogen peroxide (H(2)O(2)), as an oxidizer. A total of 30 marine bacteria were isolated from the hyper-oligotrophic waters of the South Pacific Gyre to the eutrophic waters of the Chilean coast during the BIOSOPE cruise (2004), and 10 strains from surface Mediterranean coastal waters. One third of bacteria presented a high resistance to UVB and almost all isolates presented an efficient post-irradiation recovery. Only few strains showed cell survival to high concentration of H(2)O(2). No correlation between the sampling sites and the bacterial UVB resistance was observed. Two marine bacteria, Erythrobacter flavus and Ruegeria mobilis, were of particular interest, presenting a good response to the three parameters (UVB and H(2)O(2) resistance/efficient repair). Unexpectedly, two resistant strains were again identified as Ruegeria species underlining that this geographically widespread genus, resist to UVB regardless the environment from which the isolates originate. Copyright © 2012 Elsevier B.V. All rights reserved.

Genetic diversity and population structure of Iranian wild Pleurotus eryngii species-complex strains revealed by URP-PCR markers

NARCIS (Netherlands)

Behnamian, Mahdi; Mohammadi, Seyed A.; Sonnenberg, A.S.M.; Goltapeh, Ebrahim M.; Hendrickx, P.M.

2010-01-01

In the present study, a set of 68 P. eryngii wild strains collected from nine locations in northwest and west of Iran along with six commercial strains were studied using universal rice primers (URP). The wild strains were isolated from Ferula ovina, F. haussknechtii, Cachrys ferulacea, Kellusia

CHARACTERISTICS OF MEI-YU PRECIPITATION AND SVD ANALYSIS OF PRECIPITATION OVER THE YANGTZE-HUAIHE RIVERS VALLEYS AND THE SEA SURFACE TEMPERATURE IN THE NORTHERN PACIFIC OCEAN

Institute of Scientific and Technical Information of China (English)

MAO Wen-shu; WANG Qian-qian; PENG Jun; LI Yong-hua

2008-01-01

Based on the precipitation data of Meiyu at 37 stations in the valleys of Yangtze and Huaihe Rivers from 1954 to 2001, the temporal-spatial characteristics of Meiyu precipitation and their relationships with the sea surface temperature in northern Pacific are investigated using such methods as harmonic analysis, empirical orthogonal function (EOF), composite analysis and singular value decomposition (SVD). The results show that the temporal evolution and spatial distribution of Meiyu precipitation are not homogeneous in the Yangtze-Huaihe Rivers basins but with prominent inter-annual and inter-decadal variabilities. The key region between the anomalies of Meiyu precipitation and the monthly sea surface temperature anomalies (SSTA) lies in the west wind drift of North Pacific, which influences the precipitation anomaly of Meiyu precipitation over a key period of time from January to March in the same year. When the SST in the North Pacific west wind drift is warmer (colder) than average during these months, Meiyu precipitation anomalously increases (decreases) in the concurrent year. Results of SVD are consistent with those of composite analysis which pass the significance test of Monte-Carlo at 0.05.

Nuclear issues in the Asia-Pacific region: socio-political factors

International Nuclear Information System (INIS)

Tanaka, Y.

1984-01-01

This paper explores the prospect of peaceful use of nuclear power in the Asia-Pacific region, criteria for judging the acceptability of nuclear electric power in the region, and alternative worldviews on the basis of which a regional nuclear order should be established. First, current nuclear power issues in Japan are discussed. Secondly, the Asia-Pacific countries are classified according to their stages of civil nuclear development, Thirdly, the acceptability of civil nuclear power in the region is discussed, using nuclear nonproliferation, safety, and public acceptance as three major criteria. Fourthly, conflicts of interest that cut across North/South, East/West, nuclear/non-nuclear, and nuclear weapons states/non-nuclear weapons states boundaries are discussed. Lastly,it is proposed that an international forum be convened of all the countries concerned with nuclear issues in the region. Several major objectives of this forum are suggested, including construction of a rational model for a solution for non-zero-sum gain to everyone regarding use of nuclear power in the region. (author)

Characterization of 12 microsatellite loci for the Pacific lamprey, Entosphenus tridentatus (Petromyzontidae), and cross-amplification in five other lamprey species.

Science.gov (United States)

Spice, E K; Whitesel, T A; McFarlane, C T; Docker, M F

2011-12-22

The Pacific lamprey (Entosphenus tridentatus) is an anadromous fish that is of conservation concern in North America and Asia. Data on Pacific lamprey population structure are scarce and conflicting, impeding conservation efforts. We optimized 12 polymorphic microsatellite loci for the Pacific lamprey. Three to 13 alleles per locus were observed in a sample of 51 fish collected from the West Fork Illinois River, Oregon. Observed heterozygosity ranged from 0.235 to 0.902 and expected heterozygosity ranged from 0.214 to 0.750. Cross-species amplification produced 8 to 12 polymorphic loci in four other Entosphenus species and in the western brook lamprey (Lampetra richardsoni). Two loci appear to be diagnostic for distinguishing Entosphenus from Lampetra. These markers will be valuable for evaluating population structure and making conservation decisions for E. tridentatus and other lamprey species.

Enhanced Influence of the Tropical Atlantic SST on the Western North Pacific Subtropical High after late 1970s

Science.gov (United States)

Hong, C. C.

2015-12-01

The western North Pacific subtropical high (WNPSH) in boreal summer shows a remarkable enhancement after the late 1970s. Whereas the sea surface temperature (SST) in the North Indian Ocean (NIO) and the equatorial eastern Pacific (EEP) had been noted to have remarkable local or remote effects on enhancing the WNPSH, the influence of the Atlantic SST, so far, is hardly explored. This article reports a new finding: enhanced relationship between the tropical Atlantic (TA)-SST and the WNPSH after the late 1970s. Regression study suggests that the warm TA-SST produced a zonally overturning circulation anomaly, with descending over the central equatorial Pacific and ascending over the tropical Atlantic/eastern Pacific. The anomalous descending over the central equatorial Pacific likely induced low-level anticyclonic anomaly to the west and therefore enhanced the WNPSH. One implication of this new finding is for predictability. The well-known "spring predictability barrier" (i.e., the influence of El Niño and Southern Oscillation (ENSO) falls dramatically during boreal spring) does not apply to the TA-SST/WNPSH relationship. Conversely, the TA-SST shows consistently high correlation starting from boreal spring when the ENSO influence continues declining. The TA-SST pushes the predictability of the WNPSH in boreal summer approximately one season earlier to boreal spring.

76 FR 5144 - Notice of Intent To Prepare an Environmental Impact Statement for U.S. Navy F-35C West Coast...

Science.gov (United States)

2011-01-28

... CONTACT: U.S. Navy F-35C West Coast Homebasing EIS Project Manager; Naval Facilities Engineering Command... (from January 28, 2011 through March 14, 2011). All comments will receive the same attention and... Facilities Engineering Command, Southwest (Code EV21/AK); 1220 Pacific Highway, Bldg. 1, San Diego, CA 92132...

Monogenea of fishes from the lagoon flats of Palmyra Atoll in the Central Pacific

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Victor Manuel Vidal-Martinez

2017-11-01

Full Text Available A survey of the monogeneans of fishes from the lagoon flats of Palmyra Atoll detected 16 species already reported from the Indo-West Pacific faunal region. A total of 653 individual fish from 44 species were collected from the sand flats bordering the lagoon of the atoll. Eighteen species of fish were infected with monogeneans. The monogenean species recovered were: Benedenia hawaiiensis on Acanthurus xanthopterus, Chaetodon auriga, Chaetodon lunula, Mulloidichthys flavolineatus, Pseudobalistes flavimarginatus and Rhinecanthus aculeatus; Ancyrocephalus ornatus on Arothron hispidus; Euryhaliotrema annulocirrus on Chaetodon auriga and Chaetodon lunula; Euryhaliotrema chrysotaeniae on Lutjanus fulvus; Euryhaliotrema grandis on Chaetodon auriga and Chaetodon lunula; Haliotrema acanthuri on Acanthurus triostegus; Haliotrema aurigae on Chaetodon auriga and Chaetodon lunula; Haliotrema dempsteri on Acanthurus xanthopterus; Haliotrema minutospirale on Mulloidichthys flavolineatus; Haliotrematoides patellacirrus on Lutjanus monostigma; Neohaliotrema bombini on Abudefduf septemfasciatus and Abudefduf sordidus; Acleotrema girellae and Acleotrema parastromatei on Kyphosus cinerascens; Cemocotylella elongata on Caranx ignobilis, Caranx melampygus and Caranx papuensis; Metamicrocotyla macracantha on Crenimugil crenilabris; and Pseudopterinotrema albulae on Albula glossodonta. All these monogenean–host combinations represent new geographical records. The monogenean species composition of the Palmyra Atoll is similar to that of the Hawaiian Islands. However, the number of species recovered was lower compared with other localities within the Indo-West Pacific, perhaps due to the geographical isolation of Palmyra Atoll.

Morphology and distribution of a deep-water Narcomedusa (Solmarisidae from the northeast Pacific

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Mary Needler Arai

2000-12-01

Full Text Available Specimens of Solmaris sp. (Solmarisidae, Narcomedusae with only four tentacles were collected in the northeast Pacific. The majority were collected in Canadian Pacific waters by Tucker trawl from stations outside the 500-m contour off the west coast of Vancouver Island, British Columbia, at depths of 300-700 m. Six were collected in vertical hauls at Station P (50oN, 145oW. The oral stomach wall contains three prominent rings of tissue. There is a peripheral ring of aggregates of gonadal tissue. Nematogenic areas with three types of nematocysts form an intermediate ring closer to the mouth than the gonads, and they also overlie the gonadal position where nematogenic tissue extends out to the base of each tentacle. Immediately surrounding the mouth, the epithelium of the oral stomach wall is greatly thickened, and this central ring contains large numbers of secretory cells.

Temporal variation of 137Cs water column inventory in the North Pacific since the 1960s

International Nuclear Information System (INIS)

Aoyama, M.; Hirose, K.

2003-01-01

The temporal variation of water column inventories of 137 Cs in the North Pacific since the 1960s was examined based on the analysis of the 137 Cs profiles in HAM database. 137 Cs in seawater in the North Pacific have originated mainly from global fallout from atmospheric nuclear weapons tests, which occurred in the early 1960s. In the 1960s, both the meridional distribution of 137 Cs inventory in the North Pacific and that of fallout on land stations showed mid-latitude maximum. The region with higher deposition at land stations, however, was more northern than the latitudes where the 137 Cs inventory in the North Pacific showed a maximum. The difference of the latitude where maximum 137 Cs deposition/inventory was observed reflects the difference of the geographical distribution of the precipitation amount in the Pacific and Atlantic Oceans followed by the different warm current systems in each ocean. A good positive relation between 137 Cs inventory and annual precipitation amount was discovered in the ocean stations at the middle latitude in the North Pacific. The horizontal distribution of 137 Cs inventories at the middle latitudes in the North Pacific is characterized as west-high and east-low in the early 1960s, which was basically controlled by the distribution of annual precipitation amount. Eastward advection, then, modified it to be less difference in 1966-1967 after the highest deposition periods in 1963-1965. In the 1970s and 1980s, increases of the 137 Cs inventory at the lower latitude of 10-20 deg. N are found. Surface and subsurface southward transports are considered as the source of this increasing 137 Cs inventory

Electrical conductivity imaging in the western Pacific subduction zone

Science.gov (United States)

Utada, Hisashi; Baba, Kiyoshi; Shimizu, Hisayoshi

2010-05-01

Oceanic plate subduction is an important process for the dynamics and evolution of the Earth's interior, as it is regarded as a typical downward flow of the mantle convection that transports materials from the near surface to the deep mantle. Recent seismological study showed evidence suggesting the transportation of a certain amount of water by subduction of old oceanic plate such as the Pacific plate down to 150-200 km depth into the back arc mantle. However it is not well clarified how deep into the mantle the water can be transported. The electromagnetic induction method to image electrical conductivity distribution is a possible tool to answer this question as it is known to be sensitive to the presence of water. Here we show recent result of observational study from the western Pacific subduction zone to examine the electrical conductivity distribution in the upper mantle and in the mantle transition zone (MTZ), which will provide implications how water distributes in the mantle. We take two kinds of approach for imaging the mantle conductivity, (a) semi-global and (b) regional induction approaches. Result may be summarized as follows: (a) Long (5-30 years) time series records from 8 submarine cables and 13 geomagnetic observatories in the north Pacific region were analyzed and long period magnetotelluric (MT) and geomagnetic deep sounding (GDS) responses were estimated in the period range from 1.7 to 35 days. These frequency dependent response functions were inverted to 3-dimensional conductivity distribution in the depth range between 350 and 850 km. Three major features are suggested in the MTZ depth such as, (1) a high conductivity anomaly beneath the Philippine Sea, (2) a high conductivity anomaly beneath the Hawaiian Islands, and (3) a low conductivity anomaly beneath and in the vicinity of northern Japan. (b) A three-year long deployment of ocean bottom electro-magnetometers (OBEM's) was conducted in the Philippine Sea and west Pacific Ocean from 2005

Beijing strains of Mycobacterium tuberculosis in smear-positive tuberculosis patients in North-West and West of Iran

Directory of Open Access Journals (Sweden)

Leyla Sahebi

2016-01-01

Conclusions: Finally, the prevalence of Beijing strains in Western Iran was greater than expected. Our results therefore indicate that regional and cross-border tracing may be necessary to control spread of this organism.

Asian-Pacific markets : a new strategy for Alberta oil

International Nuclear Information System (INIS)

Laureshen, C.J.; Du Plessis, D.; Xu, C.M.; Chung, K.H.

2004-01-01

Alberta's oil sands contain an estimated crude bitumen-in-place of nearly 2.5 trillion barrels. Production has increased to the point where it has overtaken non-conventional sources, and is expected to reach more than 2 million barrels per day by 2012, and over 5 million barrels per day by 2030. Although it is assumed that most of this production will be marketed in the United States, the industry is facing many constraints that could affect potential crude oil production and existing market share. The Asian-Pacific region is an obvious new market for Canadian heavy oil and bitumen due to an increasing demand for petroleum products in that region and the potential for reaching the California market with the same pipeline. This paper examined the following three criteria that will determine the success of any initiative to move Canadian crude oil to Asian-Pacific markets: (1) a sustainable supply of crude from Alberta; a pipeline to transport the crude to a deepwater port on the west coast; and, a guaranteed market at the other end. The feasibility of marketing Alberta heavy oil and bitumen to Asia was also discussed. 12 refs., 1 tab., 8 figs

Introduction to "Tsunamis in the Pacific Ocean: 2011-2012"

Science.gov (United States)

Rabinovich, Alexander B.; Borrero, Jose C.; Fritz, Hermann M.

2014-12-01

With this volume of the Pure and Applied Geophysics (PAGEOPH) topical issue "Tsunamis in the Pacific Ocean: 2011-2012", we are pleased to present 21 new papers discussing tsunami events occurring in this two-year span. Owing to the profound impact resulting from the unique crossover of a natural and nuclear disaster, research into the 11 March 2011 Tohoku, Japan earthquake and tsunami continues; here we present 12 papers related to this event. Three papers report on detailed field survey results and updated analyses of the wave dynamics based on these surveys. Two papers explore the effects of the Tohoku tsunami on the coast of Russia. Three papers discuss the tsunami source mechanism, and four papers deal with tsunami hydrodynamics in the far field or over the wider Pacific basin. In addition, a series of five papers presents studies of four new tsunami and earthquake events occurring over this time period. This includes tsunamis in El Salvador, the Philippines, Japan and the west coast of British Columbia, Canada. Finally, we present four new papers on tsunami science, including discussions on tsunami event duration, tsunami wave amplitude, tsunami energy and tsunami recurrence.

Heck and Heckle Seamounts, northeast Pacific Ocean: High extrusion rates of primitive and highly depleted mid-ocean ridge basalt on off-ridge seamounts

Science.gov (United States)

Leybourne, M. I.; van Wagoner, N. A.

1991-09-01

We analyzed, petrographically and chemically, basalt from eight dredge hauls from the Heck and Heckle seamounts, northeast Pacific Ocean. Major elements were determined for mineral, glass, and whole rock samples, and trace and rare earth elements were determined for glass and whole rock samples. The dredge hauls included hyaloclastites and fragments from sheet flows and pillows. The clinkery fragments are interpreted to be deformed sheet flow tops, characteristic of high effusion rates. The hyaloclastites recovered are reworked deposits, as indicated by the wide compositional range of the glass shards, abundance of clay and calcite matrix, and bedding. Most rocks are aphyric, but the analyzed plagioclase and olivine phenocrysts and microcrysts are equilibrium compositions and show minor compositional zonation (up to 7.5% An, chains have a limited range of incompatible element ratios, whereas the adjacent West Valley Segment of the Juan de Fuca Ridge is highly heterogeneous. In contrast, lavas from the East Pacific near-ridge seamounts exhibit a wider range of incompatible element ratios than do the adjacent East Pacific Rise basalts. On the West Valley Segment, magma supply is less robust associated with lower spreading rates compared to the East Pacific Rise at 10°N. In contrast, at fast spreading centers robust melting produces a mixed mantle signature in axial lavas, while suppressed melting at the seamounts reveals the heterogeneities. We suggest that at some spreading ridges, more fertile portions of the mantle are preferentially melted such that the outwelled portions of the mantle tapped by the seamounts are more depleted.

Vaccines in Development against West Nile Virus

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Frederic Tangy

2013-09-01

Full Text Available West Nile encephalitis emerged in 1999 in the United States, then rapidly spread through the North American continent causing severe disease in human and horses. Since then, outbreaks appeared in Europe, and in 2012, the United States experienced a new severe outbreak reporting a total of 5,387 cases of West Nile virus (WNV disease in humans, including 243 deaths. So far, no human vaccine is available to control new WNV outbreaks and to avoid worldwide spreading. In this review, we discuss the state-of-the-art of West Nile vaccine development and the potential of a novel safe and effective approach based on recombinant live attenuated measles virus (MV vaccine. MV vaccine is a live attenuated negative-stranded RNA virus proven as one of the safest, most stable and effective human vaccines. We previously described a vector derived from the Schwarz MV vaccine strain that stably expresses antigens from emerging arboviruses, such as dengue, West Nile or chikungunya viruses, and is strongly immunogenic in animal models, even in the presence of MV pre-existing immunity. A single administration of a recombinant MV vaccine expressing the secreted form of WNV envelope glycoprotein elicited protective immunity in mice and non-human primates as early as two weeks after immunization, indicating its potential as a human vaccine.

Measured wind speed trends on the west coast of Canada

Science.gov (United States)

Tuller, Stanton E.

2004-09-01

Trends in measured wind speed are discussed for four stations on the west coast of Canada. Periods of record vary with the station. They begin in the late 1940s or the 1950s and run through to the early to mid 1990s. The most prominent feature of the time series was a decline in mean annual and winter wind speeds at Cape St James, Victoria International Airport, and Vancouver International Airport during the middle portion of the record. Declines in mean annual wind speed are matched by increases in the percentage of calms and decreases in high wind speed observations. The pressure gradient between Victoria, Vancouver and Comox, the Pacific North American index, the Pacific decadal oscillation index, and other climate elements in British Columbia and the northwestern USA show trends at roughly the same time, indicating a natural cause of the wind speed decrease. Comox Airport mean wind speeds increased, however, perhaps the result of reduced friction in the vicinity of the anemometer outweighing the decrease in the regional pressure gradient.

Invasion of the Indo-Pacific blenny Omobranchus punctatus (Perciformes: Blenniidae on the Atlantic Coast of Central and South America

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Oscar Lasso-Alcalá

Full Text Available We examined 308 specimens of the Indo-Pacific blenniid Omobranchus punctatus deposited in four museum collections, and analyzed data on their collection locations to assess its invasion on the Atlantic coast of Central and South America. This species occurs in shoreline estuarine and marine habitats in the Indo-West Pacific. Previous sampling and recent records in the Tropical West Atlantic from 1930 to 2004 produced 20 records for: Panamá, Colombia, Venezuela, Trinidad and Brazil. In this work, we provide data on 17 new records for the Gulfs of Venezuela and Paria in Venezuela, as well as four records for Maranhão and Pará states in NE Brazil. The temporal pattern of collections (1930 - 2009 and the proximity of most localities to ports and zones of ship traffic indicate that O. punctatus was initially introduced to the Atlantic by ships travelling from India to Trinidad. Within Brazil the introduction is linked to shipping connected to petroleum platforms. In Maranhão and Pará the introduction may have occurred as a result of fish sheltering in fouling on hulls of ships moving between ports around the mouth of the Amazon River. Alternatively, the spread of this species along of the American coast may reflect the expansion of the range of O. puntactus through larval dispersal in northward flowing currents. We recommend monitoring of this introduced species, and studies of its ecology in West Atlantic areas.

Population structure and phylogeography reveal pathways of colonization by a migratory marine reptile (Chelonia mydas) in the central and eastern Pacific.

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Dutton, Peter H; Jensen, Michael P; Frey, Amy; LaCasella, Erin; Balazs, George H; Zárate, Patricia; Chassin-Noria, Omar; Sarti-Martinez, Adriana Laura; Velez, Elizabeth

2014-11-01

Climate, behavior, ecology, and oceanography shape patterns of biodiversity in marine faunas in the absence of obvious geographic barriers. Marine turtles are an example of highly migratory creatures with deep evolutionary lineages and complex life histories that span both terrestrial and marine environments. Previous studies have focused on the deep isolation of evolutionary lineages (>3 mya) through vicariance; however, little attention has been given to the pathways of colonization of the eastern Pacific and the processes that have shaped diversity within the most recent evolutionary time. We sequenced 770 bp of the mtDNA control region to examine the stock structure and phylogeography of 545 green turtles from eight different rookeries in the central and eastern Pacific. We found significant differentiation between the geographically separated nesting populations and identified five distinct stocks (F ST = 0.08-0.44, P eastern Pacific Chelonia mydas form a monophyletic group containing 3 subclades, with Hawaii more closely related to the eastern Pacific than western Pacific populations. The split between sampled central/eastern and western Pacific haplotypes was estimated at around 0.34 mya, suggesting that the Pacific region west of Hawaii has been a more formidable barrier to gene flow in C. mydas than the East Pacific Barrier. Our results suggest that the eastern Pacific was colonized from the western Pacific via the Central North Pacific and that the Revillagigedos Islands provided a stepping-stone for radiation of green turtles from the Hawaiian Archipelago to the eastern Pacific. Our results fit with a broader paradigm that has been described for marine biodiversity, where oceanic islands, such as Hawaii and Revillagigedo, rather than being peripheral evolutionary "graveyards", serve as sources and recipients of diversity and provide a mechanism for further radiation.

Physical trajectory profile data from glider clark deployed by Teledyne Webb Research Corporation in the North Pacific Ocean from 2013-08-22 to 2013-10-05 (NCEI Accession 0145721)

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National Oceanic and Atmospheric Administration, Department of Commerce — Test deployment of a Slocum 1000m thermal glider off the West coast of Hawai'i, Hawaii in preparation for a cross Pacific Ocean deployment. The National Centers for...

Experimental infection of Carrion crows (Corvus corone) with two European West Nile virus (WNV) strains.

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Dridi, Maha; Vangeluwe, Didier; Lecollinet, Sylvie; van den Berg, Thierry; Lambrecht, Bénédicte

2013-07-26

West Nile virus (WNV) has become a wide-spread arbovirus in Europe and the Mediterranean Basin countries. This emerging zoonotic disease disseminated 13 years ago in North America where its impact on animal and public health has been considerable. Although American corvids have been the most reliable avian sentinels for WN surveillance in the United States, there is so far no data available about the susceptibility of their Western European counterparts to WNV. Clinical follow-up and serum, oral swabs and feathers viral RNA load monitoring was herein performed on wild-caught Carrion crows (Corvus corone) experimentally inoculated with two WNV strains, Is98 that was isolated from a stork in Israel where it elicited high rates of avian deaths in 1998, and Fr2000 which was only associated to sporadic equine cases in Camargue, France in 2000. Inoculated crows were sensitive to both WNV infections and, as expected from the available epidemiological data, Is98 induced a higher mortality rate (100% vs. 33%) and a quicker fatal outcome, with higher viral RNA loads detected in the serum, oral swabs and feathers than in the Fr2000 group. Therefore, Carrion crows should also be a target species for WNV surveillance in Western Europe, where reporting for abnormal mortalities could be completed by viral detection in the herein described avian matrices. These experimental findings also emphasize the peculiarity of the European situation where a large spectrum of WNV genetic and pathotypic variants have been so far isolated despite limited WN disease reports in wild birds. Copyright © 2013 Elsevier B.V. All rights reserved.

Magmatic evolution of the Easter microplate-Crough Seamount region (South East Pacific)

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Hekinian, R.; Stoffers, P.; Akermand, D.; Binard, N.; Francheteau, Jean; Devey, C.; Garbe-Schonberg, D.

1995-01-01

The Easter microplate-Crough Seamount region located between 25?? S-116?? W and 25?? S-122?? W consists of a chain of seamounts forming isolated volcanoes and elongated (100-200 km in length) en echelon volcanic ridges oriented obliquely NE (N 065??), to the present day general spreading direction (N 100??) of the Pacific-Nazca plates. The extension of this seamount chain into the southwestern edge of the Easter microplate near 26??30??? S-115?? W was surveyed and sampled. The southern boundary including the Orongo fracture zone and other shallow ridges ( 0.25) MORBs which are similar in composition to other more recent basalts from the Southwest and East Rifts spreading axes of the Easter microplate. Incompatible element ratios normalized to chondrite values [(Ce/Yb)N = 1-2.5}, {(La/Sm)N = 0.4-1.2} and {(Zr/Y)N = 0.7-2.5} of the basalts are also similar to present day volcanism found in the Easter microplate. The volcanics from the Easter microplate-Crough region are unrelated to other known South Pacific intraplate magmatism (i.e. Society, Pitcairn, and Salas y Gomez Islands). Instead their range in incompatible element ratios is comparable to the submarine basalts from the recently investigated Ahu and Umu volcanic field (Easter hotspot) (Scientific Party SO80, 1993) and centered at about 80 km west of Easter Island. The oblique ridges and their associated seamounts are likely to represent ancient leaky transform faults created during the initial stage of the Easter microplate formation (??? 5 Ma). It appears that volcanic activity on seamounts overlying the oblique volcanic ridges has continued during their westward drift from the microplate as shown by the presence of relatively fresh lava observed on one of these structures, namely the first Oblique Volcanic Ridge near 25?? S-118?? W at about 160 km west of the Easter microplate West Rift. Based on a reconstruction of the Easter microplate, it is suggested that the Crough seamount (Easter Island. ?? 1995

A model for simulating the active dispersal of juvenile sea turtles with a case study on western Pacific leatherback turtles

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Lalire, Maxime

2017-01-01

Oceanic currents are known to broadly shape the dispersal of juvenile sea turtles during their pelagic stage. Accordingly, simple passive drift models are widely used to investigate the distribution at sea of various juvenile sea turtle populations. However, evidence is growing that juveniles do not drift purely passively but also display some swimming activity likely directed towards favorable habitats. We therefore present here a novel Sea Turtle Active Movement Model (STAMM) in which juvenile sea turtles actively disperse under the combined effects of oceanic currents and habitat-driven movements. This model applies to all sea turtle species but is calibrated here for leatherback turtles (Dermochelys coriacea). It is first tested in a simulation of the active dispersal of juveniles originating from Jamursba-Medi, a main nesting beach of the western Pacific leatherback population. Dispersal into the North Pacific Ocean is specifically investigated. Simulation results demonstrate that, while oceanic currents broadly shape the dispersal area, modeled habitat-driven movements strongly structure the spatial and temporal distribution of juveniles within this area. In particular, these movements lead juveniles to gather in the North Pacific Transition Zone (NPTZ) and to undertake seasonal north-south migrations. More surprisingly, juveniles in the NPTZ are simulated to swim mostly towards west which considerably slows down their progression towards the American west coast. This increases their residence time, and hence the risk of interactions with fisheries, in the central and eastern part of the North Pacific basin. Simulated habitat-driven movements also strongly reduce the risk of cold-induced mortality. This risk appears to be larger among the juveniles that rapidly circulate into the Kuroshio than among those that first drift into the North Equatorial Counter Current (NECC). This mechanism might induce marked interannual variability in juvenile survival as the

A model for simulating the active dispersal of juvenile sea turtles with a case study on western Pacific leatherback turtles.

Science.gov (United States)

Gaspar, Philippe; Lalire, Maxime

2017-01-01

Oceanic currents are known to broadly shape the dispersal of juvenile sea turtles during their pelagic stage. Accordingly, simple passive drift models are widely used to investigate the distribution at sea of various juvenile sea turtle populations. However, evidence is growing that juveniles do not drift purely passively but also display some swimming activity likely directed towards favorable habitats. We therefore present here a novel Sea Turtle Active Movement Model (STAMM) in which juvenile sea turtles actively disperse under the combined effects of oceanic currents and habitat-driven movements. This model applies to all sea turtle species but is calibrated here for leatherback turtles (Dermochelys coriacea). It is first tested in a simulation of the active dispersal of juveniles originating from Jamursba-Medi, a main nesting beach of the western Pacific leatherback population. Dispersal into the North Pacific Ocean is specifically investigated. Simulation results demonstrate that, while oceanic currents broadly shape the dispersal area, modeled habitat-driven movements strongly structure the spatial and temporal distribution of juveniles within this area. In particular, these movements lead juveniles to gather in the North Pacific Transition Zone (NPTZ) and to undertake seasonal north-south migrations. More surprisingly, juveniles in the NPTZ are simulated to swim mostly towards west which considerably slows down their progression towards the American west coast. This increases their residence time, and hence the risk of interactions with fisheries, in the central and eastern part of the North Pacific basin. Simulated habitat-driven movements also strongly reduce the risk of cold-induced mortality. This risk appears to be larger among the juveniles that rapidly circulate into the Kuroshio than among those that first drift into the North Equatorial Counter Current (NECC). This mechanism might induce marked interannual variability in juvenile survival as the

Water column productivity and temperature predict coral reef regeneration across the Indo-Pacific.

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Riegl, B; Glynn, P W; Wieters, E; Purkis, S; d'Angelo, C; Wiedenmann, J

2015-02-05

Predicted increases in seawater temperatures accelerate coral reef decline due to mortality by heat-driven coral bleaching. Alteration of the natural nutrient environment of reef corals reduces tolerance of corals to heat and light stress and thus will exacerbate impacts of global warming on reefs. Still, many reefs demonstrate remarkable regeneration from past stress events. This paper investigates the effects of sea surface temperature (SST) and water column productivity on recovery of coral reefs. In 71 Indo-Pacific sites, coral cover changes over the past 1-3 decades correlated negative-exponentially with mean SST, chlorophyll a, and SST rise. At six monitoring sites (Persian/Arabian Gulf, Red Sea, northern and southern Galápagos, Easter Island, Panama), over half of all corals were <31 years, implying that measured environmental variables indeed shaped populations and community. An Indo-Pacific-wide model suggests reefs in the northwest and central Indian Ocean, as well as the central west Pacific, are at highest risk of degradation, and those at high latitudes the least. The model pinpoints regions where coral reefs presently have the best chances for survival. However, reefs best buffered against temperature and nutrient effects are those that current studies suggest to be most at peril from future ocean acidification.

The Role of the Indian Ocean Sector for Prediction of the Coupled Indo-Pacific System: Impact of Atmospheric Coupling

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Hackert, E. C.; Busalacchi, A. J.; Carton, J.; Murtugudde, R.; Arkin, P.; Evans, M. N.

2017-01-01

Indian Ocean (IO) dynamics impact ENSO predictability by influencing wind and precipitation anomalies in the Pacific. To test if the upstream influence of the IO improves ENSO validation statistics, a combination of forced ocean, atmosphere, and coupled models are utilized. In one experiment, the full tropical Indo-Pacific region atmosphere is forced by observed interannual SST anomalies. In the other, the IO is forced by climatological SST. Differences between these two forced atmospheric model experiments spotlight a much richer wind response pattern in the Pacific than previous studies that used idealized forcing and simple linear atmospheric models. Weak westerlies are found near the equator similar to earlier literature. However, at initialization strong easterlies between 30 deg. S to 10 deg. S and 0 deg. N to 25 deg. N and equatorial convergence of the meridional winds across the entire Pacific are unique findings from this paper. The large-scale equatorial divergence west of the dateline and northeasterly-to-northwesterly cross-equatorial flow converging on the equator east of the dateline in the Pacific are generated from interannual IO SST coupling. In addition, off-equatorial downwelling curl impacts large-scale oceanic waves (i.e., Rossby waves reflect as western boundary Kelvin waves). After 3 months, these downwelling equatorial Kelvin waves propagate across the Pacific and strengthen the NINO3 SST. Eventually Bjerknes feedbacks take hold in the eastern Pacific which allows this warm anomaly to grow. Coupled forecasts for NINO3 SST anomalies for 1993-2014 demonstrate that including interannual IO forcing significantly improves predictions for 3-9 month lead times.

The role of the Indian Ocean sector for prediction of the coupled Indo-Pacific system: Impact of atmospheric coupling

Science.gov (United States)

Hackert, E. C.; Busalacchi, A. J.; Carton, J.; Murtugudde, R.; Arkin, P.; Evans, M. N.

2017-04-01

Indian Ocean (IO) dynamics impact ENSO predictability by influencing wind and precipitation anomalies in the Pacific. To test if the upstream influence of the IO improves ENSO validation statistics, a combination of forced ocean, atmosphere, and coupled models are utilized. In one experiment, the full tropical Indo-Pacific region atmosphere is forced by observed interannual SST anomalies. In the other, the IO is forced by climatological SST. Differences between these two forced atmospheric model experiments spotlight a much richer wind response pattern in the Pacific than previous studies that used idealized forcing and simple linear atmospheric models. Weak westerlies are found near the equator similar to earlier literature. However, at initialization strong easterlies between 30°S-10°S and 0°N-25°N and equatorial convergence of the meridional winds across the entire Pacific are unique findings from this paper. The large-scale equatorial divergence west of the dateline and northeasterly-to-northwesterly cross-equatorial flow converging on the equator east of the dateline in the Pacific are generated from interannual IO SST coupling. In addition, off-equatorial downwelling curl impacts large-scale oceanic waves (i.e., Rossby waves reflect as western boundary Kelvin waves). After 3 months, these downwelling equatorial Kelvin waves propagate across the Pacific and strengthen the NINO3 SST. Eventually Bjerknes feedbacks take hold in the eastern Pacific which allows this warm anomaly to grow. Coupled forecasts for NINO3 SST anomalies for 1993-2014 demonstrate that including interannual IO forcing significantly improves predictions for 3-9 month lead times.

Molecular identification of erythrocytic necrosis virus (ENV) from the blood of Pacific herring (Clupea pallasii)

Science.gov (United States)

Emmenegger, Eveline J.; Glenn, Jolene A.; Winton, James R.; Batts, William N.; Gregg, Jacob L.; Hershberger, Paul K.

2014-01-01

Viral erythrocytic necrosis (VEN) is a condition affecting the red blood cells of more than 20 species of marine and anadromous fishes in the North Atlantic and North Pacific Oceans. Among populations of Pacific herring (Clupea pallasii) on the west coast of North America the disease causes anemia and elevated mortality in periodic epizootics. Presently, VEN is diagnosed by observation of typical cytoplasmic inclusion bodies in stained blood smears from infected fish. The causative agent, erythrocytic necrosis virus (ENV), is unculturable and a presumed iridovirus by electron microscopy. In vivo amplification of the virus in pathogen-free laboratory stocks of Pacific herring with subsequent virus concentration, purification, DNA extraction, and high-throughput sequencing were used to obtain genomic ENV sequences. Fragments with the highest sequence identity to the family Iridoviridae were used to design four sets of ENV-specific polymerase chain reaction (PCR) primers. Testing of blood and tissue samples from experimentally and wild infected Pacific herring as well as DNA extracted from other amphibian and piscine iridoviruses verified the assays were specific to ENV with a limit of detection of 0.0003 ng. Preliminary phylogenetic analyses of a 1448 bp fragment of the putative DNA polymerase gene supported inclusion of ENV in a proposed sixth genus of the family Iridoviridae that contains other erythrocytic viruses from ectothermic hosts. This study provides the first molecular evidence of ENV's inclusion within the Iridoviridae family and offers conventional PCR assays as a means of rapidly surveying the ENV-status of wild and propagated Pacific herring stocks.

Eastward and northward components of ocean current, water temperature, and others collected from moorings in the North East Pacific Coast during the spring/summer through early fall from 2003-2008 (NCEI Accession 0164626)

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National Oceanic and Atmospheric Administration, Department of Commerce — The Ecology and Oceanography of Harmful Algal Bloom-Pacific North West (ECOHAB PNW) was a 5-year multi-disciplinary project that studied the physiology, toxicology,...

Haemophilus ducreyi Cutaneous Ulcer Strains Diverged from Both Class I and Class II Genital Ulcer Strains: Implications for Epidemiological Studies.

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Dharanesh Gangaiah

2016-12-01

Full Text Available Haemophilus ducreyi has emerged as a major cause of cutaneous ulcers (CU in yaws-endemic regions of the tropics in the South Pacific, South East Asia and Africa. H. ducreyi was once thought only to cause the genital ulcer (GU disease chancroid; GU strains belong to 2 distinct classes, class I and class II. Using whole-genome sequencing of 4 CU strains from Samoa, 1 from Vanuatu and 1 from Papua New Guinea, we showed that CU strains diverged from the class I strain 35000HP and that one CU strain expressed β-lactamase. Recently, the Center for Disease Control and Prevention released the genomes of 11 additional CU strains from Vanuatu and Ghana; however, the evolutionary relationship of these CU strains to previously-characterized CU and GU strains is unknown.We performed phylogenetic analysis of 17 CU and 10 GU strains. Class I and class II GU strains formed two distinct clades. The class I strains formed two subclades, one containing 35000HP and HD183 and the other containing the remainder of the class I strains. Twelve of the CU strains formed a subclone under the class I 35000HP subclade, while 2 CU strains formed a subclone under the other class I subclade. Unexpectedly, 3 of the CU strains formed a subclone under the class II clade. Phylogenetic analysis of dsrA-hgbA-ncaA sequences yielded a tree similar to that of whole-genome phylogenetic tree.CU strains diverged from multiple lineages within both class I and class II GU strains. Multilocus sequence typing of dsrA-hgbA-ncaA could be reliably used for epidemiological investigation of CU and GU strains. As class II strains grow relatively poorly and are relatively more susceptible to vancomycin than class I strains, these findings have implications for methods to recover CU strains. Comparison of contemporary CU and GU isolates would help clarify the relationship between these entities.

Haemophilus ducreyi Cutaneous Ulcer Strains Diverged from Both Class I and Class II Genital Ulcer Strains: Implications for Epidemiological Studies.

Science.gov (United States)

Gangaiah, Dharanesh; Spinola, Stanley M

2016-12-01

Haemophilus ducreyi has emerged as a major cause of cutaneous ulcers (CU) in yaws-endemic regions of the tropics in the South Pacific, South East Asia and Africa. H. ducreyi was once thought only to cause the genital ulcer (GU) disease chancroid; GU strains belong to 2 distinct classes, class I and class II. Using whole-genome sequencing of 4 CU strains from Samoa, 1 from Vanuatu and 1 from Papua New Guinea, we showed that CU strains diverged from the class I strain 35000HP and that one CU strain expressed β-lactamase. Recently, the Center for Disease Control and Prevention released the genomes of 11 additional CU strains from Vanuatu and Ghana; however, the evolutionary relationship of these CU strains to previously-characterized CU and GU strains is unknown. We performed phylogenetic analysis of 17 CU and 10 GU strains. Class I and class II GU strains formed two distinct clades. The class I strains formed two subclades, one containing 35000HP and HD183 and the other containing the remainder of the class I strains. Twelve of the CU strains formed a subclone under the class I 35000HP subclade, while 2 CU strains formed a subclone under the other class I subclade. Unexpectedly, 3 of the CU strains formed a subclone under the class II clade. Phylogenetic analysis of dsrA-hgbA-ncaA sequences yielded a tree similar to that of whole-genome phylogenetic tree. CU strains diverged from multiple lineages within both class I and class II GU strains. Multilocus sequence typing of dsrA-hgbA-ncaA could be reliably used for epidemiological investigation of CU and GU strains. As class II strains grow relatively poorly and are relatively more susceptible to vancomycin than class I strains, these findings have implications for methods to recover CU strains. Comparison of contemporary CU and GU isolates would help clarify the relationship between these entities.

West Valley high-level nuclear waste glass development: a statistically designed mixture study

Energy Technology Data Exchange (ETDEWEB)

Chick, L.A.; Bowen, W.M.; Lokken, R.O.; Wald, J.W.; Bunnell, L.R.; Strachan, D.M.

1984-10-01

The first full-scale conversion of high-level commercial nuclear wastes to glass in the United States will be conducted at West Valley, New York, by West Valley Nuclear Services Company, Inc. (WVNS), for the US Department of Energy. Pacific Northwest Laboratory (PNL) is supporting WVNS in the design of the glass-making process and the chemical formulation of the glass. This report describes the statistically designed study performed by PNL to develop the glass composition recommended for use at West Valley. The recommended glass contains 28 wt% waste, as limited by process requirements. The waste loading and the silica content (45 wt%) are similar to those in previously developed waste glasses; however, the new formulation contains more calcium and less boron. A series of tests verified that the increased calcium results in improved chemical durability and does not adversely affect the other modeled properties. The optimization study assessed the effects of seven oxide components on glass properties. Over 100 melts combining the seven components into a wide variety of statistically chosen compositions were tested. Viscosity, electrical conductivity, thermal expansion, crystallinity, and chemical durability were measured and empirically modeled as a function of the glass composition. The mathematical models were then used to predict the optimum formulation. This glass was tested and adjusted to arrive at the final composition recommended for use at West Valley. 56 references, 49 figures, 18 tables.

Coastal circulation and water-column properties in the War in the Pacific National Historical Park, Guam: measurements and modeling of waves, currents, temperature, salinity, and turbidity, April-August 2012

Science.gov (United States)

Storlazzi, Curt D.; Cheriton, Olivia M.; Lescinski, Jamie M.R.; Logan, Joshua B.

2014-01-01

The U.S. Geological Survey (USGS) Pacific Coastal and Marine Science Center (PCMSC) initiated an investigation in the National Park Service’s (NPS) War in the Pacific National Historical Park (WAPA) to provide baseline scientific information on coastal circulation and water-column properties along west-central Guam, focusing on WAPA’s Agat Unit, as it relates to the transport and settlement of coral larvae, fish, and other marine organisms. The oceanographic data and numerical circulation modeling results from this study demonstrate that circulation in Agat Bay was strongly driven by winds and waves at longer (>1 day) timescales and by the tides at shorter (Turbidity was relatively low in Agat Bay and was similar to levels measured elsewhere along west-central Guam. The numerical circulation modeling results provide insight into the potential paths of buoyant material released from a series of locations along west-central Guam under summer non-trade wind forcing conditions that characterize coral spawning events. This information may be useful in evaluating the potential zones of influence/impact resulting from transport by surface currents of material released from these select locations.

Virulence of viral hemorrhagic septicemia virus (VHSV) genotypes Ia, IVa, IVb, and IVc in five fish species.

Science.gov (United States)

Emmenegger, Eveline J.; Moon, Chang Hoon; Hershberger, Paul K.; Kurath, Gael

2013-01-01

The susceptibility of yellow perch Perca flavescens, rainbow trout Oncorhynchus mykiss, Chinook salmon O. tshawytscha, koi Cyprinus carpio koi, and Pacific herring Clupea pallasii to 4 strains of viral hemorrhagic septicemia virus (VHSV) was assessed. Fish were challenged via intraperitoneal injection with high (1 × 106 plaque-forming units, PFU) and low (1 × 103 PFU) doses of a European strain (genotype Ia), and North American strains from the West coast (genotype IVa), Great Lakes (genotype IVb), and the East coast (genotype IVc). Pacific herring were exposed to the same VHSV strains, but at a single dose of 5 × 103 PFU ml-1 by immersion in static seawater. Overall, yellow perch were the most susceptible, with cumulative percent mortality (CPM) ranging from 84 to 100%, and 30 to 93% in fish injected with high or low doses of virus, respectively. Rainbow trout and Chinook salmon experienced higher mortalities (47 to 98% CPM) after exposure to strain Ia than to the other virus genotypes. Pacific herring were most susceptible to strain IVa with an average CPM of 80% and moderately susceptible (42 to 52% CPM) to the other genotypes. Koi had very low susceptibility (≤5.0% CPM) to all 4 VHSV strains. Fish tested at 7 d post challenge were positive for all virus strains, with yellow perch having the highest prevalence and concentrations of virus, and koi the lowest. While genotype Ia had higher virulence in salmonid species, there was little difference in virulence or host-specificity between isolates from subtypes IVa, IVb, and IVc.  

The impact of the 2009-10 El Niño Modoki on U.S. West Coast beaches

Science.gov (United States)

Barnard, Patrick L.; Allan, Jonathan; Hansen, Jeff E.; Kaminsky, George M.; Ruggiero, Peter; Doria, André

2011-01-01

High-resolution beach morphology data collected along much of the U.S. West Coast are synthesized to evaluate the coastal impacts of the 2009-10 El Nio. Coastal change observations were collected as part of five beach monitoring programs that span between 5 and 13 years in duration. In California, regional wave and water level data show that the environmental forcing during the 2009-10 winter was similar to the last significant El Nio of 1997-98, producing the largest seasonal shoreline retreat and/or most landward shoreline position since monitoring began. In contrast, the 2009-10 El Nio did not produce anomalously high mean winter-wave energy in the Pacific Northwest (Oregon and Washington), although the highest 5% of the winter wave-energy measurements were comparable to 1997-98 and two significant non-El Nio winters. The increase in extreme waves in the 2009-10 winter was coupled with elevated water levels and a more southerly wave approach than the long-term mean, resulting in greater shoreline retreat than during 1997-98, including anomalously high shoreline retreat immediately north of jetties, tidal inlets, and rocky headlands. The morphodynamic response observed throughout the U.S. West Coast during the 2009-10 El Nio is principally linked to the El Nio Modoki phenomena, where the warm sea surface temperature (SST) anomaly is focused in the central equatorial Pacific (as opposed to the eastern Pacific during a classic El Nio), featuring a more temporally persistent SST anomaly that results in longer periods of elevated wave energy but lower coastal water levels. ?? 2011 by the American Geophysical Union.

Estimating Limit Reference Points for Western Pacific Leatherback Turtles (Dermochelys coriacea in the U.S. West Coast EEZ.

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K Alexandra Curtis

Full Text Available Biological limit reference points (LRPs for fisheries catch represent upper bounds that avoid undesirable population states. LRPs can support consistent management evaluation among species and regions, and can advance ecosystem-based fisheries management. For transboundary species, LRPs prorated by local abundance can inform local management decisions when international coordination is lacking. We estimated LRPs for western Pacific leatherbacks in the U.S. West Coast Exclusive Economic Zone (WCEEZ using three approaches with different types of information on local abundance. For the current application, the best-informed LRP used a local abundance estimate derived from nest counts, vital rate information, satellite tag data, and fishery observer data, and was calculated with a Potential Biological Removal estimator. Management strategy evaluation was used to set tuning parameters of the LRP estimators to satisfy risk tolerances for falling below population thresholds, and to evaluate sensitivity of population outcomes to bias in key inputs. We estimated local LRPs consistent with three hypothetical management objectives: allowing the population to rebuild to its maximum net productivity level (4.7 turtles per five years, limiting delay of population rebuilding (0.8 turtles per five years, or only preventing further decline (7.7 turtles per five years. These LRPs pertain to all human-caused removals and represent the WCEEZ contribution to meeting population management objectives within a broader international cooperative framework. We present multi-year estimates, because at low LRP values, annual assessments are prone to substantial error that can lead to volatile and costly management without providing further conservation benefit. The novel approach and the performance criteria used here are not a direct expression of the "jeopardy" standard of the U.S. Endangered Species Act, but they provide useful assessment information and could help guide

Psychological strains and youth suicide in rural China.

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Zhang, Jie; Wieczorek, William F; Conwell, Yeates; Tu, Xin Ming

2011-06-01

The strain theory of suicide postulates that suicide is usually preceded by psychological strains. A strain can be a consequence of any of four conflicts: differential values, aspiration and reality, relative deprivation, and lack of coping skills for a crisis. This study, with a blend of psychiatric and social predictors of suicide, identified correlates of suicide that are relevant to Chinese culture and tested the strain theory of suicide with Chinese data. We sampled 392 suicides and 416 living controls (both aged 15-34 years) from 16 rural counties in China in 2008 and interviewed two informants for each suicide and each control. We found that marriage and religion/religiosity did not distinguish the suicides from the living controls among Chinese rural young women. Religion/religiosity tended to be stronger for suicides than for controls. Psychological strains in the forms of relative deprivation, unrealized aspiration, and lack of coping skills were significantly associated with suicide, even after accounting for the role of mental illness. The strain theory of suicide forms a challenge to the psychiatric model popular in the West, at least in explaining the Chinese suicide. Copyright © 2011 Elsevier Ltd. All rights reserved.

Streptococcus penaeicida sp. nov., isolated from a diseased farmed Pacific white shrimp (Penaeus vannamei).

Science.gov (United States)

Morales-Covarrubias, Maria Soledad; Del Carmen Bolan-Mejía, María; Vela Alonso, Ana Isabel; Fernandez-Garayzabal, Jose F; Gomez-Gil, Bruno

2018-05-01

Strain CAIM 1838 T , isolated from the hepatopancreas of a cultured diseased Pacific white shrimp (Penaeus vannamei), was subjected to characterization by a polyphasic taxonomic approach. On the basis of 16S rRNA gene sequence analysis, strain CAIM 1838 T was most closely related to Streptococcus bovimastitidis 99.3 % and to other species of the Pyogenes clade of Streptococcus with lower similarity values. Average nucleotide identity values and the genome-to-genome distance of strain CAIM 1838 T , as compared with the type strains, confirmed the separate species status with closely related species of the genus Streptococcus and were all below the thresholds to delimit a species, 93.1 and 49.4 %, respectively. The DNA G+C content was 38.1 mol%. Differential phylogenetic distinctiveness together with phenotypic properties obtained in this study revealed that strain CAIM 1838 T could be differentiated from the closely related species. Based on these results it is proposed that strain CAIM 1838 T represents a novel species in the genus Streptococcus, for which the name Streptococcus penaeicida sp. nov is proposed (type strain, CAIM 1838 T =CECT 8596 T ,=DSM26545 T ), is proposed.

An Indo-Pacific damselfish (Neopomacentrus cyanomos) in the Gulf of Mexico: origin and mode of introduction.

Science.gov (United States)

Robertson, D Ross; Dominguez-Dominguez, Omar; Victor, Benjamin; Simoes, Nuno

2018-01-01

The Indo-West Pacific (IWP) coral-reef damselfish Neopomacentrus cyanomos is well established across the south-west Gulf of Mexico (SwGoMx). Comparisons of mtDNA sequences of the SwGoMx population with those from conspecifics from 16 sites scattered across its native geographic range show that the SwGoMx population is derived from two of four native lineages: one from the north-west Pacific Ocean, the other from the northern Indian Ocean. Three hypotheses address how this species was introduced to the SwGoMX: (1) aquarium release; (2) borne by cargo-ship; and (3) carried by offshore petroleum platform (petro-platform). The first is unlikely because this species rarely features in the aquarium trade, and " N. cyanomos " traded to the USA from the sole IWP source we are aware of are a misidentified congener, N. taeniurus . The second hypothesis is unlikely because shipping has not been associated with the introduction of alien damselfishes, there is little international shipping between the IWP and the SwGoMx, and voyages between those areas would be lengthy and along environmentally unfavorable routes. Various lines of evidence support the third hypothesis: (i) bio-fouled petro-platforms represent artificial reefs that can sustain large and diverse populations of tropical reef-fishes, including N. cyanomos in the SwGoMx; (ii) relocation of such platforms has been implicated in trans-oceanic introductions leading to establishment of non-native populations of such fishes; and (iii) genetic characteristics of the SwGoMx population indicate that it was established by a large and diverse group of founders drawn from the IWP regions where many petro-platforms currently in the SwGoMx and other Atlantic offshore oilfields originated.

An Indo-Pacific damselfish (Neopomacentrus cyanomos in the Gulf of Mexico: origin and mode of introduction

Directory of Open Access Journals (Sweden)

D. Ross Robertson

2018-02-01

Full Text Available The Indo-West Pacific (IWP coral-reef damselfish Neopomacentrus cyanomos is well established across the south-west Gulf of Mexico (SwGoMx. Comparisons of mtDNA sequences of the SwGoMx population with those from conspecifics from 16 sites scattered across its native geographic range show that the SwGoMx population is derived from two of four native lineages: one from the north-west Pacific Ocean, the other from the northern Indian Ocean. Three hypotheses address how this species was introduced to the SwGoMX: (1 aquarium release; (2 borne by cargo-ship; and (3 carried by offshore petroleum platform (petro-platform. The first is unlikely because this species rarely features in the aquarium trade, and “N. cyanomos” traded to the USA from the sole IWP source we are aware of are a misidentified congener, N. taeniurus. The second hypothesis is unlikely because shipping has not been associated with the introduction of alien damselfishes, there is little international shipping between the IWP and the SwGoMx, and voyages between those areas would be lengthy and along environmentally unfavorable routes. Various lines of evidence support the third hypothesis: (i bio-fouled petro-platforms represent artificial reefs that can sustain large and diverse populations of tropical reef-fishes, including N. cyanomos in the SwGoMx; (ii relocation of such platforms has been implicated in trans-oceanic introductions leading to establishment of non-native populations of such fishes; and (iii genetic characteristics of the SwGoMx population indicate that it was established by a large and diverse group of founders drawn from the IWP regions where many petro-platforms currently in the SwGoMx and other Atlantic offshore oilfields originated.

An Indo-Pacific damselfish (Neopomacentrus cyanomos) in the Gulf of Mexico: origin and mode of introduction

Science.gov (United States)

Dominguez-Dominguez, Omar; Victor, Benjamin; Simoes, Nuno

2018-01-01

The Indo-West Pacific (IWP) coral-reef damselfish Neopomacentrus cyanomos is well established across the south-west Gulf of Mexico (SwGoMx). Comparisons of mtDNA sequences of the SwGoMx population with those from conspecifics from 16 sites scattered across its native geographic range show that the SwGoMx population is derived from two of four native lineages: one from the north-west Pacific Ocean, the other from the northern Indian Ocean. Three hypotheses address how this species was introduced to the SwGoMX: (1) aquarium release; (2) borne by cargo-ship; and (3) carried by offshore petroleum platform (petro-platform). The first is unlikely because this species rarely features in the aquarium trade, and “N. cyanomos” traded to the USA from the sole IWP source we are aware of are a misidentified congener, N. taeniurus. The second hypothesis is unlikely because shipping has not been associated with the introduction of alien damselfishes, there is little international shipping between the IWP and the SwGoMx, and voyages between those areas would be lengthy and along environmentally unfavorable routes. Various lines of evidence support the third hypothesis: (i) bio-fouled petro-platforms represent artificial reefs that can sustain large and diverse populations of tropical reef-fishes, including N. cyanomos in the SwGoMx; (ii) relocation of such platforms has been implicated in trans-oceanic introductions leading to establishment of non-native populations of such fishes; and (iii) genetic characteristics of the SwGoMx population indicate that it was established by a large and diverse group of founders drawn from the IWP regions where many petro-platforms currently in the SwGoMx and other Atlantic offshore oilfields originated. PMID:29441235

Ecology of West Nile Fever across four European countries: Review of weather profiles, vector population dynamics and vector control response

Science.gov (United States)

West Nile virus (WNV) represents a serious burden to human and animal health because of its capacity to cause large unforeseen epidemics. Until 2004, only lineage 1 and 3 WNV strains had been found in Europe. Lineage 2 strains were initially isolated in 2004 (Hungary), again in 2008 (Austria), and f...

Intraseasonal variability of upper-ocean currents and photosynthetic primary production along the U.S. west coast associated with the Madden-Julian Oscillation

Science.gov (United States)

Barrett, B.; Davies, A. R.; Steppe, C. N.; Hackbarth, C.

2017-12-01

In the first part of this study, time-lagged composites of upper-ocean currents from February to May of 1993-2016 were binned by active phase of the leading atmospheric mode of intraseasonal variability, the Madden-Julian Oscillation (MJO). Seven days after the convectively active phase of the MJO enters the tropical Indian Ocean, anomalously strong south-southeastward upper-ocean currents are observed along the majority of U.S. west coast. Seven days after the convectively active phase enters the tropical western Pacific Ocean, upper-ocean current anomalies reverse along the U.S. west coast, with weaker southward flow. A physical pathway to the ocean was found for both of these: (a) tropical MJO convection modulates upper-tropospheric heights and circulation over the Pacific Ocean; (b) those anomalous atmospheric heights adjust the strength and position of the Aleutian Low and Hawaiian High; (c) surface winds change in response to the adjusted atmospheric pressure patterns; and (d) those surface winds project onto upper-ocean currents. In the second part of this study, we investigated if the MJO modulated intraseasonal variability of surface wind forcing and upper-ocean currents projected onto phytoplankton abundance along the U.S. west coast. Following a similar methodology, time-lagged, level 3 chlorophyll-a satellite products (a proxy for photosynthetic primary production) were binned by active MJO phase and analyzed for statistical significance using the Student's t test. Results suggest that intraseasonal variability of biological production along the U.S. west coast may be linked to the MJO, particularly since the time scale of the life cycle of phytoplankton is similar to the time scale of the MJO.

A multi-scale study of the dynamical processes of the tropical Pacific Ocean

Science.gov (United States)

Kidwell, Autumn Noel

In recent years, it has been observed that there are different types of El Nino events. The warm events can be divided into two categories: those centered in the central Pacific (CP) and those centered in the eastern Pacific (EP). We examined the variability of western Pacific warm pool (WP) horizontal migration and size from January 1982 to December 2011 by applying Ensemble Empirical Mode Decomposition (EEMD) and Hilbert Huang Spectrum (HHS) to the optimally interpolated sea surface temperature (OISST) data set. The analysis shows that the long-term residual trend of the zonal centroid movement is migrating to the west by 3.78 from the mean location during the past 30 years. The size of the warm pool has also increased 18% during this period. These analysis techniques isolated two separate time series for the migration of the zonal component of the WPWP for both CP and EP events and showed that these two types of El Nino generally operate at different time-scales. The EP time-series shows the strong traditional EP El Nino and the transition between strong El Nino conditions and La Nina conditions. The CP time-series shows that CP El Ninos occur more often than EP El Ninos. The changes of the El Nino type in conjunction with westward drift and increasing warm pool size shows an interesting multidecadal change in the warm pool.

Distribution and ecology of pest fruit fly species in Asia and the Pacific

International Nuclear Information System (INIS)

Allwood, Allan; Vueti, Ema Tora

2003-01-01

Fruit flies belong to the very diverse family Tephritidae, which consists of over 4,500 species distributed in most temperate, sub-tropical and tropical countries. In Asia and the Pacific regions, most of the major pest species belong to two genera. Bactrocera and Dacus. Representatives of Ceratitis occur in southwest Western Australia and the Indian Ocean islands and Carpomya occur in the Indian sub-continent and in Mauritius and Reunion. In the Asian region, 180 species of Bactrocera and 30 species of Dacus have been recorded and in the Australasian and Oceanic region, there are 270 species of Bactrocera and 27 species of Dacus. The diversity of species progressively decreases as the plant/host diversity decreases from west in Indonesia and Papua New Guinea to east in the Polynesian Island countries. The major pest species in the Asian region belong to the dorsalis complex (B. carambolae, B. dorsalis, B. occipitalis, B. philippinensis, B. papayae and B. pyrifoliae) and include other species such as B. cucurbitae, B. zonata, B. latifrons, and others. In the Pacific region, Australia has 100 species of fruit flies. Many Pacific Island countries each have endemic species, several of which are major pests. The factors that impact on populations of fruit flies include host ranges, life cycles, mating and oviposition behavior, dispersal capacity, nutritional, moisture, temperature and light requirements, and competition within and between species. (author)

Linking Stream Dissolved Oxygen with the Dynamic Environmental Drivers across the Pacific Coast of U.S.A.

Science.gov (United States)

Araya, F. Z.; Abdul-Aziz, O. I.

2017-12-01

This study utilized a systematic data analytics approach to determine the relative linkages of stream dissolved oxygen (DO) with the hydro-climatic and biogeochemical drivers across the U.S. Pacific Coast. Multivariate statistical techniques of Pearson correlation matrix, principal component analysis, and factor analysis were applied to a complex water quality dataset (1998-2015) at 35 water quality monitoring stations of USGS NWIS and EPA STORET. Power-law based partial least squares regression (PLSR) models with a bootstrap Monte Carlo procedure (1000 iterations) were developed to reliably estimate the relative linkages by resolving multicollinearity (Nash-Sutcliffe Efficiency, NSE = 0.50-0.94). Based on the dominant drivers, four environmental regimes have been identified and adequately described the system-data variances. In Pacific North West and Southern California, water temperature was the most dominant driver of DO in majority of the streams. However, in Central and Northern California, stream DO was controlled by multiple drivers (i.e., water temperature, pH, stream flow, and total phosphorus), exhibiting a transitional environmental regime. Further, total phosphorus (TP) appeared to be the limiting nutrient for most streams. The estimated linkages and insights would be useful to identify management priorities to achieve healthy coastal stream ecosystems across the Pacific Coast of U.S.A. and similar regions around the world. Keywords: Data analytics, water quality, coastal streams, dissolved oxygen, environmental regimes, Pacific Coast, United States.

The parasite Ichthyophonus sp. in Pacific herring from the coastal NE Pacific.

Science.gov (United States)

Hershberger, P K; Gregg, J L; Hart, L M; Moffitt, S; Brenner, R; Stick, K; Coonradt, E; Otis, E O; Vollenweider, J J; Garver, K A; Lovy, J; Meyers, T R

2016-04-01

The protistan parasite Ichthyophonus occurred in populations of Pacific herring Clupea pallasii Valenciennes throughout coastal areas of the NE Pacific, ranging from Puget Sound, WA north to the Gulf of Alaska, AK. Infection prevalence in local Pacific herring stocks varied seasonally and annually, and a general pattern of increasing prevalence with host size and/or age persisted throughout the NE Pacific. An exception to this zoographic pattern occurred among a group of juvenile, age 1+ year Pacific herring from Cordova Harbor, AK in June 2010, which demonstrated an unusually high infection prevalence of 35%. Reasons for this anomaly were hypothesized to involve anthropogenic influences that resulted in locally elevated infection pressures. Interannual declines in infection prevalence from some populations (e.g. Lower Cook Inlet, AK; from 20-32% in 2007 to 0-3% during 2009-13) or from the largest size cohorts of other populations (e.g. Sitka Sound, AK; from 62.5% in 2007 to 19.6% in 2013) were likely a reflection of selective mortality among the infected cohorts. All available information for Ichthyophonus in the NE Pacific, including broad geographic range, low host specificity and presence in archived Pacific herring tissue samples dating to the 1980s, indicate a long-standing host-pathogen relationship. © 2015 John Wiley & Sons Ltd.

76 FR 33641 - Safety Zone; The Pacific Grove Feast of Lanterns, Fireworks Display, Pacific Grove, CA

Science.gov (United States)

2011-06-09

...-AA00 Safety Zone; The Pacific Grove Feast of Lanterns, Fireworks Display, Pacific Grove, CA AGENCY... support of the Pacific Grove Feast of Lanterns Fireworks Display. This safety zone is established to... Purpose Pacific Grove Feast of Lanterns will sponsor the Pacific Grove Feast of Lanterns Fireworks Display...

Meteorology of the Southern Global Plume: African and South American Fires Pollute the South Pacific

Science.gov (United States)

Guo, Z.; Chatfield, R. B.

1999-01-01

An immense global plume of CO meanders widely around the world in the Southern Hemisphere. It arises over Southern America and Africa and flows eastward. The first emissions are in tropical Brazil, and the plume circulates around the world to South America again. The plume was largely unexpected until there were aircraft studies made in NASA's Pacific Exploratory Mission - Tropics (Part A). This paper describes the meteorology of the Global Plume, as our simulation, with a synoptic model adapted to global transport, reveals it with a tracer-CO simulation. The observations and their simulation require a particular set of conditions of pollutant accumulation, cumulonimbus venting with required strengths at a narrow range of altitude. Additionally, a particular subtropical conduction region, over the Indian Ocean, Australia, and the westeRNmost South Pacific, relatively free of storms, appears to be a key part of the mechanism. These conclusions are the results of a synoptic reconstruction of the PEMT-A period, September- October, 1996.

Asia Pacific energy derivatives

International Nuclear Information System (INIS)

Fusaro, P.C.

1997-09-01

Asia Pacific Energy Derivatives, from FT Energy, is the first report of its kind to examine the growth of energy derivatives within Asia Pacific and their increasing importance within this region. It provides a comprehensive overview of the subject, including analysis of: deregulation as a market driver; the impact of privatisation; the future for energy risk management tools; the unique characteristics of the Asia Pacific energy market; the role of futures exchanges in Asia; existing indexes and their performance; the differences between the Asia Pacific markets and their more mature counterparts in London and New York; non-oil derivatives, project finance and cross commodity arbitrage; the thriving Pacific Rim Over the Counter (OTC) markets. (author)

Biology and impacts of Pacific Islands invasive species. 14. Sus scrofa the feral pig (Artiodactyla: Suidae)

Science.gov (United States)

Wehr, Nathaniel H.; Hess, Steven C.; Litton, Creighton M.

2018-01-01

Feral pigs (Sus scrofa L.) are perhaps the most abundant, widespread, and economically significant large introduced vertebrate across the Pacific island region. Unlike many other nonnative invasive species, feral pigs have both cultural and recreational importance in the region, complicating their management. Today, Pacific island feral pigs are a mixture of several strains of domestic swine, Asiatic wild boar, and European wild boar. Due to their generalist diet and rooting behavior, feral pigs alter soils and watersheds and negatively impact native and nonnative flora and fauna. As a result, feral pigs have played a role in the extinction of several species of plants and animals on Pacific islands and have negative effects on both ecotourism and agricultural industries in the region. Despite numerous published studies on feral pigs in the Pacific island region, of which the majority include systematic analyses of original empirical data, some fundamental aspects of feral pig ecology remain poorly characterized, at least partly due to the remote and inaccessible environments that they often inhabit. To address these knowledge gaps, effort should be made to integrate research conducted outside the Pacific island region into local management strategies. This review summarizes the origins, history, ecology, environmental effects, and current management of feral pigs in the Pacific island region; integrates regional scientific findings with those of other insular and continental systems; and identifies current knowledge gaps requiring further research to inform the ecology and management of this impactful invasive species.

Pacific Equatorial Transect

OpenAIRE

Pälike, Heiko; Nishi, Hiroshi; Lyle, Mitch; Raffi, Isabella; Klaus, Adam; Gamage, Kusali

2009-01-01

Integrated Ocean Drilling Program Expedition 320/321, "Pacific Equatorial Age Transect" (Sites U1331–U1338), was designed to recover a continuous Cenozoic record of the paleoequatorial Pacific by coring above the paleoposition of the Equator at successive crustal ages on the Pacific plate. These sediments record the evolution of the paleoequatorial climate system throughout the Cenozoic. As we gained more information about the past movement of plates and when in Earth's history "critical" cli...

The Eurasia-North Pacific Oscillation in atmospheric mass variations independent of both IHO and AO and its possible impacts on winter climate

Science.gov (United States)

Zhang, Qian; Guan, Zhaoyong; Li, Minggang

2017-09-01

Using NCEP/NCAR reanalysis, we have investigated the features of migrations of atmospheric mass (AM) between land and ocean in Eurasia-North Pacific domain in boreal winter after having both signals of Inter-hemispheric Oscillation and Arctic Oscillation removed from the physical quantities. It is found that there is a Eurasia-North Pacific Oscillation (ENPO) in surface air pressure anomalies. This ENPO pattern characterizes with two oppositely signed anomalous surface pressure centers over Eurasia and North Pacific respectively, indicating strong connections between Siberian high and Aleutian low during period 1979-2012. The maintenance of this ENPO teleconnection is significantly associated with three factors including the anomalous AM flows and zonal circulation cell over Eurasia-North Pacific domain, the Rossby wave energy propagations, and the thermal forcing contrasts near the surface between Eurasia and North Pacific during boreal winter. The variations of both wintertime rainfall and temperature over Eurasia may be strongly affected by ENPO. When the ENPO index is positive (negative), there occurs the AM accumulation (depletion) over Eurasia with simultaneous depletion (accumulation) over mid-latitude North-Pacific. Correspondingly, this anomalous surface pressure pattern along with the related circulation anomalies at different isobaric levels possibly results in winter precipitation decreases (increases) over Siberian Plain and East China, whereas increases (decreases) over southeastern Europe, Xinjiang of China, and the west coast of Sea of Okhotsk. On the other hand, surface air temperature decreases (increases) over large areas of Eurasia. These results are helpful for our better understanding the mechanisms behind circulation and winter climate variations over Eurasia-North Pacific region.

The Eurasia-North Pacific Oscillation in atmospheric mass variations independent of both IHO and AO and its possible impacts on winter climate

Science.gov (United States)

Zhang, Qian; Guan, Zhaoyong; Li, Minggang

2018-06-01

Using NCEP/NCAR reanalysis, we have investigated the features of migrations of atmospheric mass (AM) between land and ocean in Eurasia-North Pacific domain in boreal winter after having both signals of Inter-hemispheric Oscillation and Arctic Oscillation removed from the physical quantities. It is found that there is a Eurasia-North Pacific Oscillation (ENPO) in surface air pressure anomalies. This ENPO pattern characterizes with two oppositely signed anomalous surface pressure centers over Eurasia and North Pacific respectively, indicating strong connections between Siberian high and Aleutian low during period 1979-2012. The maintenance of this ENPO teleconnection is significantly associated with three factors including the anomalous AM flows and zonal circulation cell over Eurasia-North Pacific domain, the Rossby wave energy propagations, and the thermal forcing contrasts near the surface between Eurasia and North Pacific during boreal winter. The variations of both wintertime rainfall and temperature over Eurasia may be strongly affected by ENPO. When the ENPO index is positive (negative), there occurs the AM accumulation (depletion) over Eurasia with simultaneous depletion (accumulation) over mid-latitude North-Pacific. Correspondingly, this anomalous surface pressure pattern along with the related circulation anomalies at different isobaric levels possibly results in winter precipitation decreases (increases) over Siberian Plain and East China, whereas increases (decreases) over southeastern Europe, Xinjiang of China, and the west coast of Sea of Okhotsk. On the other hand, surface air temperature decreases (increases) over large areas of Eurasia. These results are helpful for our better understanding the mechanisms behind circulation and winter climate variations over Eurasia-North Pacific region.

The Teleconnection of the Tropical Atlantic to Indo-Pacific Sea Surface Temperatures on Inter-Annual to Centennial Time Scales: A Review of Recent Findings

Directory of Open Access Journals (Sweden)

Fred Kucharski

2016-02-01

Full Text Available In this paper, the teleconnections from the tropical Atlantic to the Indo-Pacific region from inter-annual to centennial time scales will be reviewed. Identified teleconnections and hypotheses on mechanisms at work are reviewed and further explored in a century-long pacemaker coupled ocean-atmosphere simulation ensemble. There is a substantial impact of the tropical Atlantic on the Pacific region at inter-annual time scales. An Atlantic Niño (Niña event leads to rising (sinking motion in the Atlantic region, which is compensated by sinking (rising motion in the central-western Pacific. The sinking (rising motion in the central-western Pacific induces easterly (westerly surface wind anomalies just to the west, which alter the thermocline. These perturbations propagate eastward as upwelling (downwelling Kelvin-waves, where they increase the probability for a La Niña (El Niño event. Moreover, tropical North Atlantic sea surface temperature anomalies are also able to lead La Niña/El Niño development. At multidecadal time scales, a positive (negative Atlantic Multidecadal Oscillation leads to a cooling (warming of the eastern Pacific and a warming (cooling of the western Pacific and Indian Ocean regions. The physical mechanism for this impact is similar to that at inter-annual time scales. At centennial time scales, the Atlantic warming induces a substantial reduction of the eastern Pacific warming even under CO2 increase and to a strong subsurface cooling.

The parasite Ichthyophonus sp. in Pacific herring from the coastal NE Pacific

Science.gov (United States)

Hershberger, Paul K.; Gregg, Jacob L.; Hart, Lucas M.; Moffitt, Steve; Brenner, Richard L.; Stick, K.; Coonradt, Eric; Otis, E. O.; Vollenweider, Johanna J.; Garver, Kyle A.; Lovy, Jan; Meyers, T.R.

2016-01-01

The protistan parasite Ichthyophonus occurred in populations of Pacific herring Clupea pallasii Valenciennes throughout coastal areas of the NE Pacific, ranging from Puget Sound, WA north to the Gulf of Alaska, AK. Infection prevalence in local Pacific herring stocks varied seasonally and annually, and a general pattern of increasing prevalence with host size and/or age persisted throughout the NE Pacific. An exception to this zoographic pattern occurred among a group of juvenile, age 1+ year Pacific herring from Cordova Harbor, AK in June 2010, which demonstrated an unusually high infection prevalence of 35%. Reasons for this anomaly were hypothesized to involve anthropogenic influences that resulted in locally elevated infection pressures. Interannual declines in infection prevalence from some populations (e.g. Lower Cook Inlet, AK; from 20–32% in 2007 to 0–3% during 2009–13) or from the largest size cohorts of other populations (e.g. Sitka Sound, AK; from 62.5% in 2007 to 19.6% in 2013) were likely a reflection of selective mortality among the infected cohorts. All available information for Ichthyophonus in the NE Pacific, including broad geographic range, low host specificity and presence in archived Pacific herring tissue samples dating to the 1980s, indicate a long-standing host–pathogen relationship.

Bomb-test 90Sr in Pacific and Indian Ocean surface water as recorded by banded corals

International Nuclear Information System (INIS)

Toggweiler, J.R.; Trumbore, S.

1985-01-01

We report here measurements of bomb-test 90 Sr activity in the CaCO 3 skeletons of banded head forming corals collected from nine locations in the tropical Pacific and Indian Oceans. Density variations in skeletal carbonate demarcate annual growth bands and allow one to section individual years. Measurements of 90 Sr activity in the annual bands reconstruct the activity of the water in which the coral grew. Our oldest records date to the early years of the nuclear era and record not only fallout deposition from the major U.S. and Soviet tests of 1958-1962, but also the huge, and largely unappreciated, localized inputs from the U.S. tests at Eniwetok and Bikini atolls during 1952-1958. In the 1960's the 90 Sr activity in Indian Ocean surface water was twice as high as activity levels in the South Pacific at comparable latitudes. We suggest that substantial amounts of northern hemisphere fallout moved west and south into the Indian Ocean via passages through the Indonesian archipelago. Equatorial Pacific 90 Sr levels have remained relatively constant from the mid 1960's through the end of 1970's in spite of 90 Sr decay, reflecting a large-scale transfer of water between the temperate and tropical North Pacific. Activity levels at Fanning Is. (4 0 N, 160 0 W) appear to vary in conjunction with the 3-4 year El Nino cycle. (orig.)

Phylogenetic diversity and ecological pattern of ammonia-oxidizing archaea in the surface sediments of the western Pacific.

Science.gov (United States)

Cao, Huiluo; Hong, Yiguo; Li, Meng; Gu, Ji-Dong

2011-11-01

The phylogenetic diversity of ammonia-oxidizing archaea (AOA) was surveyed in the surface sediments from the northern part of the South China Sea (SCS). The distribution pattern of AOA in the western Pacific was discussed through comparing the SCS with other areas in the western Pacific including Changjiang Estuary and the adjacent East China Sea where high input of anthropogenic nitrogen was evident, the tropical West Pacific Continental Margins close to the Philippines, the deep-sea methane seep sediments in the Okhotsk Sea, the cold deep sea of Northeastern Japan Sea, and the hydrothermal field in the Southern Okinawa Trough. These various environments provide a wide spectrum of physical and chemical conditions for a better understanding of the distribution pattern and diversities of AOA in the western Pacific. Under these different conditions, the distinct community composition between shallow and deep-sea sediments was clearly delineated based on the UniFrac PCoA and Jackknife Environmental Cluster analyses. Phylogenetic analyses showed that a few ammonia-oxidizing archaeal subclades in the marine water column/sediment clade and endemic lineages were indicative phylotypes for some environments. Higher phylogenetic diversity was observed in the Philippines while lower diversity in the hydrothermal vent habitat. Water depth and possibly with other environmental factors could be the main driving forces to shape the phylogenetic diversity of AOA observed, not only in the SCS but also in the whole western Pacific. The multivariate regression tree analysis also supported this observation consistently. Moreover, the functions of current and other climate factors were also discussed in comparison of phylogenetic diversity. The information collectively provides important insights into the ecophysiological requirements of uncultured ammonia-oxidizing archaeal lineages in the western Pacific Ocean.

Perotrochus caledonicus (Gastropoda: Pleurotomariidae revisited: descriptions of new species from the South-West Pacific

Directory of Open Access Journals (Sweden)

Patrick Anseeuw

2015-08-01

Full Text Available Morphological (shell and molecular examination of a large suite of specimens of pleurotomariids from around New Caledonia and the Coral Sea reveals the existence of four species in the complex of Perotrochus caledonicus: Perotrochus deforgesi Métivier, 1990 and P. pseudogranulosus sp. nov. live allopatrically on the plateaus and guyots of the Coral Sea; Perotrochus caledonicus Bouchet & Métivier, 1982 and Perotrochus wareni sp. nov. live sympatrically - but essentially not syntopically - on the slopes of New Caledonia, Norfolk Ridge and the Loyalty Ridge. All species live in the 300–500 m interval, and together form a significant component of the mollusc fauna living on hard bottoms in the SW Pacific, with individual dredge hauls containing up to 25 specimens of Perotrochus.

Characteristics of low-frequency oscillation intensity of airsea turbulent heat fluxes over the northwest Pacific

Institute of Scientific and Technical Information of China (English)

无

2009-01-01

Based on the daily turbulent heat fluxes and related meteorological variables datasets (1985-2006) from Objectively Analyzed air-sea Fluxes (OAFlux) Project of Woods Hole Oceanographic Institution (WHOI), characteristics of low-frequency oscillation intensity of air-sea turbulent heat fluxes over the northwest Pacific are analyzed by linear perturbation method and correlation analysis. It can be concluded that: 1) the distribution of low-frequency oscillation intensity of latent heat flux (LHF) over the northwest Pacific is mainly affected by that of low-frequency oscillation intensity of anomalous air-sea humidity gradient (Δq′) as well as mean air-sea humidity gradient ( Δ q), while the distribution of low-frequency oscillation intensity of sensible heat flux (SHF) is mainly affected by that of low-frequency oscillation intensity of anomalous air-sea temperature gradient (ΔT′). 2) The low-frequency oscillation of turbulent heat fluxes over the northwest Pacific is the strongest in winter and the weakest in summer. And the seasonal transition of low-frequency oscillation intensity of LHF is jointly influenced by those of low-frequency oscillation intensity of Δq′, low-frequency oscillation intensity of anomalous wind speed (U′), Δ q and mean wind speed (U ), while the seasonal transition of low-frequency oscillation intensity of SHF is mainly influenced by those of low-frequency oscillation intensity of ΔT′ and U . 3) Over the tropical west Pacific and sea areas north of 20°N, the low-frequency oscillation of LHF (SHF) is mainly influenced by atmospheric variables qa′ (Ta′) and U′, indicating an oceanic response to overlying atmospheric forcing. In contrast, over the tropical eastern and central Pacific south of 20°N, qs′ (Ts′) also greatly influences the low-frequency oscillation of LHF (SHF).

Anthropogenic Contribution to the Southeast Pacific Precipitation Decline and Recent (2010-2015) Mega-Drought in Chile

Science.gov (United States)

Boisier, J. P.

2015-12-01

Within the large uncertainties in the precipitation response to the anthropogenic climate forcing, the projections towards dryer conditions in the southeast Pacific sector and west bound of southern South America represent a particularly robust signature in climate model simulations. A rainfall decline of consistent direction but of larger amplitude than those simulated has been observed in Chile during the last decades, but the causes of this trend have never been formally attributed. With this purpose, we analyze local rain-gauge data and contrast them to a large ensemble both of fully-coupled and sea surface temperature-forced simulations. In concomitance with large-scale circulation changes, we show that the Pacific Decadal Oscillation explains about 50% of the rainfall trend observed since 1979 in central Chile. Our results also indicate that the remaining fraction of the observed drying is unlikely (p Chile since 2010, emerges as a realistic scenario for this region under the current socio-economic pathway.

Do trans-Pacific air masses deliver PBDEs to coastal British Columbia, Canada?

International Nuclear Information System (INIS)

Noel, Marie; Dangerfield, Neil; Hourston, Roy A.S.; Belzer, Wayne; Shaw, Pat; Yunker, Mark B.; Ross, Peter S.

2009-01-01

In order to distinguish between 'local' and 'background' sources of polychlorinated biphenyls (PCBs) and polybrominated diphenyl ethers (PBDEs) in coastal British Columbia (Canada) air, we collected samples from two sites: a remote site on western Vancouver Island, and a near-urban site in the Strait of Georgia. Seasonally-integrated samples of vapor, particulate, and rain were collected continuously during 365 days for analysis of 275 PCB and PBDE congeners. While deposition of the legacy PCBs was similar at both sampling sites, deposition of PBDEs at the remote site amounted to 42% (10.4 mg/ha/year) of that at the near-urban site. Additional research into atmospheric circulation in the NE Pacific Ocean will provide more insight into the transport and fate of priority pollutants in this region, but trans-Pacific delivery of PBDEs to the west coast of North America may underlie in part our observations. For example, approximately 40% of >12,000 ten-day back trajectories calculated for the remote site originated over Asia, compared to only 2% over North America. - Legacy PCBs and current-use PBDEs are dispersed through atmospheric processes in coastal British Columbia, Canada.

Genogeography and Immune Epitope Characteristics of Hepatitis B Virus Genotype C Reveals Two Distinct Types: Asian and Papua-Pacific.

Directory of Open Access Journals (Sweden)

Meta Dewi Thedja

Full Text Available Distribution of hepatitis B virus (HBV genotypes/subgenotypes is geographically and ethnologically specific. In the Indonesian archipelago, HBV genotype C (HBV/C is prevalent with high genome variability, reflected by the presence of 13 of currently existing 16 subgenotypes. We investigated the association between HBV/C molecular characteristics with host ethnicity and geographical distribution by examining various subgenotypes of HBV/C isolates from the Asia and Pacific region, with further analysis on the immune epitope characteristics of the core and surface proteins. Phylogenetic tree was constructed based on complete HBV/C genome sequences from Asia and Pacific region, and genetic distance between isolates was also examined. HBV/C surface and core immune epitopes were analyzed and grouped by comparing the amino acid residue characteristics and geographical origins. Based on phylogenetic tree and geographical origins of isolates, two major groups of HBV/C isolates--East-Southeast Asia and Papua-Pacific--were identified. Analysis of core and surface immune epitopes supported these findings with several amino acid substitutions distinguishing the East-Southeast Asia isolates from the Papua-Pacific isolates. A west-to-east gradient of HBsAg subtype distribution was observed with adrq+ prominent in the East and Southeast Asia and adrq- in the Pacific, with several adrq-indeterminate subtypes observed in Papua and Papua New Guinea (PNG. This study indicates that HBV/C isolates can be classified into two types, the Asian and the Papua-Pacific, based on the virus genome diversity, immune epitope characteristics, and geographical distribution, with Papua and PNG as the molecular evolutionary admixture region in the switching from adrq+ to adrq-.

Tectonic map of the Circum-Pacific region, Pacific basin sheet

Science.gov (United States)

Scheibner, E.; Moore, G.W.; Drummond, K.J.; Dalziel, Corvalan Q.J.; Moritani, T.; Teraoka, Y.; Sato, T.; Craddock, C.

2013-01-01

Circum-Pacific Map Project: The Circum-Pacific Map Project was a cooperative international effort designed to show the relationship of known energy and mineral resources to the major geologic features of the Pacific basin and surrounding continental areas. Available geologic, mineral, and energy-resource data are being complemented by new, project-developed data sets such as magnetic lineations, seafloor mineral deposits, and seafloor sediment. Earth scientists representing some 180 organizations from more than 40 Pacific-region countries are involved in this work. Six overlapping equal-area regional maps at a scale of 1:10,000,000 form the cartographic base for the project: the four Circum-Pacific Quadrants (Northwest, Southwest, Southeast, and Northeast), and the Antarctic and Arctic Sheets. There is also a Pacific Basin Sheet at a scale of 1:17,000,000. The Base Map Series and the Geographic Series (published from 1977 to 1990), the Plate-Tectonic Series (published in 1981 and 1982), the Geodynamic Series (published in 1984 and 1985), and the Geologic Series (published from 1984 to 1989) all include six map sheets. Other thematic map series in preparation include Mineral-Resources, Energy-Resources and Tectonic Maps. Altogether, more than 50 map sheets are planned. The maps were prepared cooperatively by the Circum-Pacific Council for Energy and Mineral Resources and the U.S. Geological Survey and are available from the Branch of Distribution, U. S. Geological Survey, Box 25286, Federal Center, Denver, Colorado 80225, U.S.A. The Circum-Pacific Map Project is organized under six panels of geoscientists representing national earth-science organizations, universities, and natural-resource companies. The six panels correspond to the basic map areas. Current panel chairmen are Tomoyuki Moritani (Northwest Quadrant), R. Wally Johnson (Southwest Quadrant), Ian W.D. Dalziel (Antarctic Region), vacant. (Southeast Quadrant), Kenneth J. Drummond (Northeast Quadrant), and

Climate Prediction Center (CPC) East Pacific/ North Pacific Teleconnection Pattern Index

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Monthly tabulated index of the East Pacific/ North Pacific teleconnection pattern. The data spans the period 1950 to present. The index is derived from a rotated...

Quasi real-time estimation of the moment magnitude of large earthquake from static strain changes

Science.gov (United States)

Itaba, S.

2016-12-01

The 2011 Tohoku-Oki (off the Pacific coast of Tohoku) earthquake, of moment magnitude 9.0, was accompanied by large static strain changes (10-7), as measured by borehole strainmeters operated by the Geological Survey of Japan in the Tokai, Kii Peninsula, and Shikoku regions. A fault model for the earthquake on the boundary between the Pacific and North American plates, based on these borehole strainmeter data, yielded a moment magnitude of 8.7. On the other hand, based on the seismic wave, the prompt report of the magnitude which the Japan Meteorological Agency (JMA) announced just after earthquake occurrence was 7.9. Such geodetic moment magnitudes, derived from static strain changes, can be estimated almost as rapidly as determinations using seismic waves. I have to verify the validity of this method in some cases. In the case of this earthquake's largest aftershock, which occurred 29 minutes after the mainshock. The prompt report issued by JMA assigned this aftershock a magnitude of 7.3, whereas the moment magnitude derived from borehole strain data is 7.6, which is much closer to the actual moment magnitude of 7.7. In order to grasp the magnitude of a great earthquake earlier, several methods are now being suggested to reduce the earthquake disasters including tsunami. Our simple method of using static strain changes is one of the strong methods for rapid estimation of the magnitude of large earthquakes, and useful to improve the accuracy of Earthquake Early Warning.

Tropical Pacific Climate, Carbon, and Ocean Biogeochemical Response to the Central American Seaway in a GFDL Earth System Model

Science.gov (United States)

Sentman, L. T.; Dunne, J. P.; Stouffer, R. J.; Krasting, J. P.; Wittenberg, A. T.; Toggweiler, J. R.; Broccoli, A. J.

2017-12-01

To explore the tropical Pacific climate, carbon, and ocean biogeochemical response to the shoaling and closure of the Central American Seaway during the Pliocene (5.3-2.6 Ma), we performed a suite of sensitivity experiments using the Geophysical Fluid Dynamics Laboratory Earth System Model, GFDL-ESM2G, varying only the seaway widths and sill depths. These novel ESM simulations include near-final closure of the seaway with a very narrow, 1º grid cell wide opening. Net mass transport through the seaway into the Caribbean is 20.5-23.1 Sv with a deep seaway, but only 14.1 Sv for the wide/shallow seaway because of the inter-basin bi-directional horizontal mass transport. Seaway transport originates from the Antarctic Circumpolar Current in the Pacific and rejoins it in the South Atlantic, reducing the Indonesian Throughflow and transporting heat and salt southward into the South Atlantic, in contrast to present-day and previous seaway simulations. Tropical Pacific mean climate and interannual variability is sensitive to the seaway shoaling, with the largest response to the wider/deeper seaway. In the tropical Pacific, the top 300-m warms 0.4-0.8°C, the equatorial east-west sea surface temperature gradient increases, the north-south sea surface temperature asymmetry at 110°W decreases, thermocline deepens 5-11 m, and the east-west thermocline gradient increases. In the Niño-3 region, ENSO amplitude increases, skewed toward more cold (La Niña) events, El Niño and La Niña develops earlier ( 3 months), the annual cycle weakens and the semi-annual and interannual cycles strengthen from increased symmetry of the north-south sea surface temperature gradient, and atmospheric global teleconnections strengthen with the seaway. The increase in global ocean overturning with the seaway results in a younger average ocean ideal age, reduced dissolved inorganic carbon inventory and marine net primary productivity, and altered inter-basin patterns of surface sediment carbonate

Phylogenetic analysis of Hungarian goose parvovirus isolates and vaccine strains.

Science.gov (United States)

Tatár-Kis, Tímea; Mató, Tamás; Markos, Béla; Palya, Vilmos

2004-08-01

Polymerase chain reaction and sequencing were used to analyse goose parvovirus field isolates and vaccine strains. Two fragments of the genome were amplified. Fragment "A" represents a region of VP3 gene, while fragment "B" represents a region upstream of the VP3 gene, encompassing part of the VP1 gene. In the region of fragment "A" the deduced amino acid sequence of the strains was identical, therefore differentiation among strains could be done only at the nucleotide level, which resulted in the formation of three groups: Hungarian, West-European and Asian strains. In the region of fragment "B", separation of groups could be done by both nucleotide and deduced amino acid sequence level. The nucleotide sequences resulted in the same groups as for fragment "A" but with a different clustering pattern among the Hungarian strains. Within the "Hungarian" group most of the recent field isolates fell into one cluster, very closely related or identical to each other, indicating a very slow evolutionary change. The attenuated strains and field isolates from 1979/80 formed a separate cluster. When vaccine strains and field isolates were compared, two specific amino acid differences were found that can be considered as possible markers for vaccinal strains. Sequence analysis of fragment "B" seems to be a suitable method for differentiation of attenuated vaccine strains from virulent strains. Copyright 2004 Houghton Trust Ltd

The January 1989 Nestucca oil spill on the West Coast of Vancouver Island, British Columbia

International Nuclear Information System (INIS)

Davis, J.C.

1990-01-01

This paper reports that at the beginning of January 1989, bunker C oil from the barge Nestucca began coming ashore on the West Coast of Vancouver Island, necessitating a major environmental assessment and clean-up response on the part of a number of Canadian agencies, volunteers, Native groups and concerned Parties. The oil impacted the exposed outer coastline, including the recreational beaches of Pacific Rim National Park, and caused concerns with respect to harvesting the shellfish and other marine life, the important salmon and herring resources of the area, marine mammals including two colonies of sea otters and also with respect to seabird mortality. This spill, coupled wit public sensitivity to the Exxon Valdez spill and the transportation of oil and hazardous substances along the West Coast, led to several public inquiry processes as well as internal reviews of agency response, preparedness and other issues and generated considerable public outcry and criticism

Temperature, salinity, dissolved oxygen, and other variables collected from profile observations using CTD and other instruments from NOAA Ship FAIRWEATHER and R/V POINT SUR in the West Coast of the United States from 5 Aug to 2013-08-28 (NODC Accession 0119491)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains the CTD measurements collected by Dr. Gregory C. Johnson of the Pacific Marine Environmental Laboratory during the West Coast Ocean...

Characteristics of low-frequency oscillation intensity of air-sea turbulent heat fluxes over the northwest Pacific

Institute of Scientific and Technical Information of China (English)

LI Gen; REN BaoHua; ZHENG JianOiu; WANG Jun

2009-01-01

Based on the daily turbulent heat fluxes and related meteorological variables dataeets (1985-2006) from Objectively Analyzed air-sea Fluxes (OAFlux) Project of Woods Hole Oceanographic Institution (WHOI), characteristics of low-frequency oscillation intensity of air-sea turbulent heat fluxes over the northwest Pacific are analyzed by linear perturbation method and correlation analysis. It can be concluded that: 1) the distribution of low-frequency oscillation intensity of latent heat flux (LHF) over the northwest Pacific is mainly affected by that of low-frequency oscillation intensity of anomalous air-eea humidity gradient (△q') as well as mean air-eea humidity gradient (△q), while the distribution of low-frequency oscillation Intensity of sensible heat flux (SHF) is mainly affected by that of low-frequency oscillation intensity of anomalous air-sea temperature gradient (△T'). 2) The low-frequency oscillation of turbulent heat fluxes over the northwest Pacific is the strongest in winter and the weakest in summer. And the seasonal transition of low-frequency oscillation intensity of LHF is jointly influenced by those of low-frequency oscillation intensity of △q', low-frequency oscillation intensity of anomalous wind speed (U'), △q and mean wind speed (U), while the seasonal transition of low-frequency oscillation intensity of SHF is mainly influenced by those of low-frequency oscillation Intensity of △T' and U. 3) Over the tropical west Pacific and sea areas north of 20ON, the low-frequency oscillation of LHF (SHF) is mainly influenced by atmospheric variables qa' (Ta') and U', indicating an oceanic response to overlying atmospheric forcing. In contrast, over the tropical eastern and central Pacific south of 20°N, qs' (Ts') also greatly influences the low-frequency oscillation of LHF (SHF).

Asymmetric Response of the Equatorial Pacific SST to Climate Warming and Cooling

Energy Technology Data Exchange (ETDEWEB)

Liu, Fukai [Physical Oceanography Laboratory/Qingdao Collaborative Innovation Center of Marine Science and Technology, Ocean University of China, and Qingdao National Laboratory for Marine Science and Technology, Qingdao, China; Luo, Yiyong [Physical Oceanography Laboratory/Qingdao Collaborative Innovation Center of Marine Science and Technology, Ocean University of China, and Qingdao National Laboratory for Marine Science and Technology, Qingdao, China; Lu, Jian [Atmospheric Sciences and Global Change Division, Pacific Northwest National Laboratory, Richland, Washington; Garuba, Oluwayemi [Atmospheric Sciences and Global Change Division, Pacific Northwest National Laboratory, Richland, Washington; Wan, Xiuquan [Physical Oceanography Laboratory/Qingdao Collaborative Innovation Center of Marine Science and Technology, Ocean University of China, and Qingdao National Laboratory for Marine Science and Technology, Qingdao, China

2017-09-01

The response of the equatorial Pacific Ocean to heat fluxes of equal amplitude but opposite sign is investigated using the Community Earth System Model (CESM). Results show a strong asymmetry in SST changes. In the eastern equatorial Pacific (EEP), the warming responding to the positive forcing exceeds the cooling to the negative forcing; while in the western equatorial Pacific (WEP), it is the other way around and the cooling surpasses the warming. This leads to a zonal dipole asymmetric structure, with positive values in the east and negative values in the west. A surface heat budget analysis suggests that the SST asymmetry is mainly resulted from the oceanic horizontal advection and vertical entrainment, with both of their linear and nonlinear components playing a role. For the linear component, its change appears to be more significant over the EEP (WEP) in the positive (negative) forcing scenario, favoring the seesaw pattern of the SST asymmetry. For the nonlinear component, its change acts to warm (cool) the EEP (WEP) in both scenarios, also favorable for the development of the SST asymmetry. Additional experiments with a slab ocean confirm the dominant role of ocean dynamical processes for this SST asymmetry. The net surface heat flux, in contrast, works to reduce the SST asymmetry through its shortwave radiation and latent heat flux components, with the former being related to the nonlinear relationship between SST and convection, and the latter being attributable to Newtonian damping and air-sea stability effects. The suppressing effect of shortwave radiation on SST asymmetry is further verified by partially coupled overriding experiments.

Comparative susceptibility of veliger larvae of four bivalve mollusks to a Vibrio alginolyticus strain.

Science.gov (United States)

Luna-González, A; Maeda-Martínez, A N; Sainz, J C; Ascencio-Valle, F

2002-06-03

The susceptibility of 7 d old veliger larvae of the scallops Argopecten ventricosus and Nodipecten subnodosus, the penshell Atrina maura, and the Pacific oyster Crassostrea gigas to a pathogenic strain of Vibrio alginolyticus was investigated by challenging the larvae with different bacterial concentrations in a semi-static assay. The results indicate that the larvae of the 2 scallop species are more susceptible to the V. alginolyticus strain than those of the oyster and the penshell. Signs of the disease were similar to bacillary necrosis described in previous work. Interspecies differences in susceptibility to pathogens are discussed.

Gridded multibeam bathymetry of Howland Island, Pacific Remote Island Areas, Central Pacific

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Gridded bathymetry at 40m resolution surrounding Howland Island, within the Pacific Remote Island Areas - Central Pacific Ocean. Bottom coverage was achieved in...

West Nile virus isolated from a Virginia opossum (Didelphis virginiana) in northwestern Missouri, USA, 2012.

Science.gov (United States)

Bosco-Lauth, Angela; Harmon, Jessica R; Lash, R Ryan; Weiss, Sonja; Langevin, Stanley; Savage, Harry M; Godsey, Marvin S; Burkhalter, Kristen; Root, J Jeffrey; Gidlewski, Thomas; Nicholson, William L; Brault, Aaron C; Komar, Nicholas

2014-10-01

We describe the isolation of West Nile virus (WNV; Flaviviridae, Flavivirus) from blood of a Virginia opossum (Didelphis virginiana) collected in northwestern Missouri, USA in August 2012. Sequencing determined that the virus was related to lineage 1a WNV02 strains. We discuss the role of wildlife in WNV disease epidemiology.

Gridded multibeam bathymetry of Baker Island, Pacific Remote Island Areas, Central Pacific

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Gridded bathymetry at 40m resolution surrounding Baker Island, within the Pacific Remote Island Areas - Central Pacific Ocean. Bottom coverage was achieved in depths...

African, Amerindian and European hepatitis B virus strains circulate on the Caribbean Island of Martinique.

Science.gov (United States)

Brichler, Ségolène; Lagathu, Gisèle; Chekaraou, Mariama Abdou; Le Gal, Frédéric; Edouard, André; Dény, Paul; Césaire, Raymond; Gordien, Emmanuel

2013-10-01

Ten Hepatitis B virus (HBV) genotypes, as well as numerous subgenotypes, have been described in well-characterized ethnogeographical populations. Martinique has been at a crossroads between Africa, Europe, India and the Americas because of the slave trade (17th-19th centuries), followed by an important immigration of Indian and West African workers. In this work, we aimed to study the molecular epidemiology of HBV infection in Martinique according to this unique settlement pattern. To that end, blood samples from 86 consecutive HBV-infected patients from the main hospitals of the island, were retrospectively analysed. Direct sequencing of the pre-S1 or pre-C-C region or complete genome sequencing, followed by phylogenetic analyses were performed. HBV genotypes were: HBV/A1 (68.6 %), HBV/A2 (10.5 %), HBV/D, mainly HBV/D3 and HBV/D4 (8.1 %), HBV/F (3.5 %), and also HBV/E (2.3 %), two strains isolated from two West-African patients. Moreover, 74 % of the HBeAg-negative strains harboured classical pre-C-C mutations, and most HBV/A1 strains also containing specific mutations. Finally, various patterns of deletion mutants in pre-S and pre-C-C regions were found. In conclusion, our findings point to historical and migration-related issues in HBV-genotype distribution suggesting that HBV/A1, but not HBV/E, was imported from Africa during the slave trade, and further supporting the hypothesis that HBV/E has emerged recently in West Africa (<150 years). Potential origins of 'European' HBV/A2 and HBV/D3, 'Amerindian' HBV/F, and HBV/D4 strains are also discussed. Such HBV genetic diversity, beyond its epidemiological interest, may have a clinical impact on the natural history of HBV infection in Martinique.

Background issues of oil supply trading in Pacific island countries

International Nuclear Information System (INIS)

1990-01-01

The 1980s has been a decade of considerable change within the petroleum industry resulting in new supply arrangements and continued uncertainty within the island countries about reasonable supply and pricing terms. Formulating an effective response is all the more challenging for small countries which have only recently become independent, which have miniscule public sector organizations responsible for energy policy and which occupy a region where petroleum dominates commercial energy use to a greater extent, well over 90 per cent, than any other part of the world. During the past five years the Energy Resources Section of ESCAP, and staff members of the Energy Program within the East West Center in Honolulu have frequently worked closely with the Pacific Energy Development Programme (PEDP) to advise Pacific island Governments on a wide range of petroleum policy and administration issues, including shipping, overall supply arrangements, contracts for refined products, price control and monitoring, regional co-operation, and storage options. They have also organized a number of formal and informal training activities within the petroleum sector and worked closely with a World Bank team which investigated regional bulk oil purchase in 1986. This report is of interest to readers concerned with options facing small countries, from both national and regional perspectives, for dealing with petroleum policy. Refs, figs and tabs

Changes in atmospheric rivers and moisture transport over the Northeast Pacific and western North America in response to ENSO diversity

Science.gov (United States)

Kim, Hye-Mi; Zhou, Yang; Alexander, Michael A.

2017-03-01

The year-to-year changes in atmospheric rivers (ARs) and moisture transport over the northeast Pacific and western North America are investigated during December to February (DJF) from 1979/80 to 2015/16. Changes in AR frequency, intensity, and landfall characteristics are compared between three ENSO phases: central Pacific El Niño (CPEN), eastern Pacific El Niño (EPEN), and La Niña (NINA). During EPEN events, the subtropical jet extends to the south and east with an anomalous cyclonic flow around a deeper Aleutian Low. More moisture is transported towards North America and AR frequency is increased over western North America. In CPEN events, the Aleutian low shifts further southward relative to its position in EPEN, resulting in an increase in the frequency and intensity of landfalling ARs over the southwestern US. In NINA events, the landfalling AR frequency is reduced associated with anomalous anticyclonic circulation over the eastern North Pacific. We diagnose the contribution of multiple factors to the seasonal mean moisture transport using moisture budgets. During the three ENSO phases, the change in low-frequency circulation (dynamical process) is the leading contributor to the seasonal mean moisture flux divergence, while the contributions of the synoptic anomalies and the change in moisture anomaly (thermodynamic process) are not significant along the west coast of North America.

Russia/Asia-Pacific: rising gas and oil production in the Russian Far East will recast Asia-Pacific energy markets

International Nuclear Information System (INIS)

Khartukov, E.

1994-01-01

The next few years will see the emergence of the Russian Far East (RFE) as a major new source of hydrocarbons. Expansion of the production of crude oil and refined products will substantially improve the region's degree of energy self-sufficiency. The development of the large gas reserves is likely to have the greatest impact however. Three scenario's for this development are examined. Even under the most pessimistic the region's gas balance will show an exportable surplus by 2000. The energy future of the RFE, especially export plans for gas, depends on foreign investment, though. A radical improvement in the investment climate is needed to promote international co-operation. Political factors and strains within the Russian Federation and dwindling supplies of the crude oil and refined products from Siberia which the RFE still needs, tend to favour the development of economic links between the RFE and its Pacific Rim neighbours. The RFE would then be involved in Pacific energy flows, exporting gas and importing crude oil and refined products to make up its domestic shortfall rather than being dependent on Moscow controlled supplies. Should the RFE take this independent course and open its doors to foreign investors, solutions to the region's energy security problems would be made easier. There would almost certainly, though, be rivalry between the USA, Japan and Korea for influence with the RFE. (3 tables) (UK)

Russia's economic prospects in the Asia Pacific Region

Directory of Open Access Journals (Sweden)

Stephen Fortescue

2016-01-01

Full Text Available Russia has declared a priority interest in developing a strong economic relationship with the Asia Pacific Region. There has been considerable internal debate over the best strategic approach to such a relationship. While a policy victory has been won by a strategy focusing on the export into the region of manufactured goods and services, a resource-export strategy is still dominant in practice and funding. Here the prospects of each strategy are assessed. Regarding resource exports, hydrocarbons, copper and iron ore prospects are reviewed, but most detail is provided on the coal sector. That involves an account of infrastructure issues, including a major debate over the expansion of the BAM and TransSiberian railways. The analysis suggests that Russia will struggle both to revitalise the Russian Far East through manufacturing exports to the APR and to replace revenues earned through resource exports to the West through an economic ‘turn to the East’.

Probiotics for gastrointestinal disorders: Proposed recommendations for children of the Asia-Pacific region

Science.gov (United States)

Cameron, Donald; Hock, Quak Seng; Kadim, Musal; Mohan, Neelam; Ryoo, Eell; Sandhu, Bhupinder; Yamashiro, Yuichiro; Jie, Chen; Hoekstra, Hans; Guarino, Alfredo

2017-01-01

Recommendations for probiotics are available in several regions. This paper proposes recommendations for probiotics in pediatric gastrointestinal diseases in the Asia-Pacific region. Epidemiology and clinical patterns of intestinal diseases in Asia-Pacific countries were discussed. Evidence-based recommendations and randomized controlled trials in the region were revised. Cultural aspects, health management issues and economic factors were also considered. Final recommendations were approved by applying the Likert scale and rated using the GRADE system. Saccharomyces boulardii CNCM I-745 (Sb) and Lactobacillus rhamnosus GG (LGG) were strongly recommended as adjunct treatment to oral rehydration therapy for gastroenteritis. Lactobacillus reuteri could also be considered. Probiotics may be considered for prevention of (with the indicated strains): antibiotic-associated diarrhea (LGG or Sb); Clostridium difficile-induced diarrhea (Sb); nosocomial diarrhea (LGG); infantile colic (L reuteri) and as adjunct treatment of Helicobacter pylori (Sb and others). Specific probiotics with a history of safe use in preterm and term infants may be considered in infants for prevention of necrotizing enterocolitis. There is insufficient evidence for recommendations in other conditions. Despite a diversity of epidemiological, socioeconomical and health system conditions, similar recommendations apply well to Asia pacific countries. These need to be validated with local randomized-controlled trials. PMID:29259371

Molecular phylogenetic analysis of non-sexually transmitted strains of Haemophilus ducreyi.

Science.gov (United States)

Gaston, Jordan R; Roberts, Sally A; Humphreys, Tricia L

2015-01-01

Haemophilus ducreyi, the etiologic agent of chancroid, has been previously reported to show genetic variance in several key virulence factors, placing strains of the bacterium into two genetically distinct classes. Recent studies done in yaws-endemic areas of the South Pacific have shown that H. ducreyi is also a major cause of cutaneous limb ulcers (CLU) that are not sexually transmitted. To genetically assess CLU strains relative to the previously described class I, class II phylogenetic hierarchy, we examined nucleotide sequence diversity at 11 H. ducreyi loci, including virulence and housekeeping genes, which encompass approximately 1% of the H. ducreyi genome. Sequences for all 11 loci indicated that strains collected from leg ulcers exhibit DNA sequences homologous to class I strains of H. ducreyi. However, sequences for 3 loci, including a hemoglobin receptor (hgbA), serum resistance protein (dsrA), and a collagen adhesin (ncaA) contained informative amounts of variation. Phylogenetic analyses suggest that these non-sexually transmitted strains of H. ducreyi comprise a sub-clonal population within class I strains of H. ducreyi. Molecular dating suggests that CLU strains are the most recently developed, having diverged approximately 0.355 million years ago, fourteen times more recently than the class I/class II divergence. The CLU strains' divergence falls after the divergence of humans from chimpanzees, making it the first known H. ducreyi divergence event directly influenced by the selective pressures accompanying human hosts.

Molecular phylogenetic analysis of non-sexually transmitted strains of Haemophilus ducreyi.

Directory of Open Access Journals (Sweden)

Jordan R Gaston

Full Text Available Haemophilus ducreyi, the etiologic agent of chancroid, has been previously reported to show genetic variance in several key virulence factors, placing strains of the bacterium into two genetically distinct classes. Recent studies done in yaws-endemic areas of the South Pacific have shown that H. ducreyi is also a major cause of cutaneous limb ulcers (CLU that are not sexually transmitted. To genetically assess CLU strains relative to the previously described class I, class II phylogenetic hierarchy, we examined nucleotide sequence diversity at 11 H. ducreyi loci, including virulence and housekeeping genes, which encompass approximately 1% of the H. ducreyi genome. Sequences for all 11 loci indicated that strains collected from leg ulcers exhibit DNA sequences homologous to class I strains of H. ducreyi. However, sequences for 3 loci, including a hemoglobin receptor (hgbA, serum resistance protein (dsrA, and a collagen adhesin (ncaA contained informative amounts of variation. Phylogenetic analyses suggest that these non-sexually transmitted strains of H. ducreyi comprise a sub-clonal population within class I strains of H. ducreyi. Molecular dating suggests that CLU strains are the most recently developed, having diverged approximately 0.355 million years ago, fourteen times more recently than the class I/class II divergence. The CLU strains' divergence falls after the divergence of humans from chimpanzees, making it the first known H. ducreyi divergence event directly influenced by the selective pressures accompanying human hosts.

Susceptibility of Carrion Crows to Experimental Infection with Lineage 1 and 2 West Nile Viruses.

Science.gov (United States)

Lim, Stephanie M; Brault, Aaron C; van Amerongen, Geert; Bosco-Lauth, Angela M; Romo, Hannah; Sewbalaksing, Varsha D; Bowen, Richard A; Osterhaus, Albert D M E; Koraka, Penelope; Martina, Byron E E

2015-08-01

West Nile virus (WNV) outbreaks in North America have been characterized by substantial die-offs of American crows (Corvus brachyrhynchos). In contrast, a low incidence of bird deaths has been observed during WNV epidemic activity in Europe. To examine the susceptibility of the western European counterpart of American crows, we inoculated carrion crows (Corvus corone) with WNV strains isolated in Greece (Gr-10), Italy (FIN and Ita09), and Hungary (578/10) and with the highly virulent North American genotype strain (NY99). We also inoculated American crows with a selection of these strains to examine the strains' virulence in a highly susceptible bird species. Infection with all strains, except WNV FIN, resulted in high rates of death and high-level viremia in both bird species and virus dissemination to several organs. These results suggest that carrion crows are highly susceptible to WNV and may potentially be useful as part of dead bird surveillance for early warning of WNV activity in Europe.

Anomalous winter climate conditions in the Pacific rim during recent El Nino Modoki and El Nino events

Energy Technology Data Exchange (ETDEWEB)

Weng, Hengyi; Behera, Swadhin K. [Climate Variations Research Program, Frontier Research Center for Global Change/JAMSTEC, Yokohama (Japan); Yamagata, Toshio [Climate Variations Research Program, Frontier Research Center for Global Change/JAMSTEC, Yokohama (Japan)]|[University of Tokyo, Department of Earth and Planetary Science, Graduate School of Sciences, Tokyo (Japan)

2009-04-15

Present work compares impacts of El Nino Modoki and El Nino on anomalous climate in the Pacific rim during boreal winters of 1979-2005. El Nino Modoki (El Nino) is associated with tripole (dipole) patterns in anomalies of sea-surface temperature, precipitation, and upper-level divergent wind in the tropical Pacific, which are related to multiple 'boomerangs' of ocean-atmosphere conditions in the Pacific. Zonal and meridional extents of those 'boomerangs' reflect their independent influences, which are seen from lower latitudes in the west to higher latitudes in the east. In the central Pacific, more moisture is transported from the tropics to higher latitudes during El Nino Modoki owing to displacement of the wet 'boomerang' arms more poleward toward east. Discontinuities at outer 'boomerang' arms manifest intense interactions between tropical and subtropical/extratropical systems. The Pacific/North American pattern and related climate anomalies in North America found in earlier studies are modified in very different ways by the two phenomena. The seesaw with the dry north and the wet south in the western USA is more likely to occur during El Nino Modoki, while much of the western USA is wet during El Nino. The moisture to the southwestern USA is transported from the northward shifted ITCZ during El Nino Modoki, while it is carried by the storms traveling along the southerly shifted polar front jet during El Nino. The East Asian winter monsoon related anticyclone is over the South China Sea during El Nino Modoki as compared to its position over the Philippine Sea during El Nino, causing opposite precipitation anomalies in the southern East Asia between the two phenomena. (orig.)

Deglacial Western Equatorial Pacific pCO2 Reconstruction Using Boron Isotopes of Planktonic Foraminiferas

Science.gov (United States)

Kubota, K.; Yokoyama, Y.; Ishikawa, T.; Sagawa, T.; Ikehara, M.; Yamazaki, T.

2017-12-01

During the last deglaciation (ca. 19 - 11 ka), partial pressure of CO2 (pCO2) of the atmosphere increased by 80 μatm. Many paleoceanographers point out that the ocean had played an important role in atmospheric CO2 rise, since the ocean have 60 times larger capacity to store carbon compared to the atmosphere. However, evidence on where carbon was transferred from the ocean to the atmosphere is still lacking, hampering our understanding of global carbon cycles in glacial-interglacial timescales. Boron isotope of skeletons of marine calcifying organisms such as corals and foraminiferas can pin down where CO2 source/sink existed, because boron isotopes of marine calcium carbonates is dependent on seawater pH, from which pCO2 of the past seawater can be reconstructed. In previous studies using the boron isotope teqnique, Martinez-Boti et al. (2015, Nature) and Kubota et al. (2014, Scientific Reports) revealed that central and eastern parts of the equatorial Pacific acted as a CO2 source (i.e., CO2 emission) during the last deglaciation, suggesting the equatorial Pacific's contribution to atmospheric CO2 rise. However, some conflicting results have been confirmed in a marine sediment record from the western part of the equatorial Pacific (Palmer & Pearson, 2003, Science), making the conclusion elusive. In this presentation, we will show new results of Mg/Ca, oxygen isotope, and boron isotope measurements during the last 35 ka on two species of surface dwelling foraminiferas (Globigerinoides ruber and G. sacculifer) which was hand-picked separatedly from a well-dated marine sediment core recovered from the West Caroline Basin (KR05-15 PC01) (Yamazaki et al., 2008, GRL). From the new records, we will discuss how the equatorial Pacific behaved during the last deglaciation and how it related to the global carbon cycles.

West Valley demonstration project: alternative processes for solidifying the high-level wastes

International Nuclear Information System (INIS)

Holton, L.K.; Larson, D.E.; Partain, W.L.; Treat, R.L.

1981-10-01

In 1980, the US Department of Energy (DOE) established the West Valley Solidification Project as the result of legislation passed by the US Congress. The purpose of this project was to carry out a high level nuclear waste management demonstration project at the Western New York Nuclear Service Center in West Valley, New York. The DOE authorized the Pacific Northwest Laboratory (PNL), which is operated by Battelle Memorial Institute, to assess alternative processes for treatment and solidification of the WNYNSC high-level wastes. The Process Alternatives Study is the suject of this report. Two pretreatment approaches and several waste form processes were selected for evaluation in this study. The two waste treatment approaches were the salt/sludge separation process and the combined waste process. Both terminal and interim waste form processes were studied. The terminal waste form processes considered were: borosilicate glass, low-alkali glass, marbles-in-lead matrix, and crystallinolecular potential and molecular dynamics calculations of the effect are yet to be completed. Cous oxide was also investigated. The reaction is first order in nitrite ion, second order in hydrogen ion, and between zero and first order in hydroxylamine monosulfonate, depending on the concentration

Distribution and seasonal differences in Pacific Lamprey and Lampetra spp eDNA across 18 Puget Sound watersheds

Science.gov (United States)

Ostberg, Carl O.; Chase, Dorothy M.; Hayes, Michael C.; Duda, Jeffrey J.

2018-01-01

Lampreys have a worldwide distribution, are functionally important to ecological communities and serve significant roles in many cultures. In Pacific coast drainages of North America, lamprey populations have suffered large declines. However, lamprey population status and trends within many areas of this region are unknown and such information is needed for advancing conservation goals. We developed two quantitative PCR-based, aquatic environmental DNA (eDNA) assays for detection of Pacific Lamprey (Entosphenus tridentatus) and Lampetra spp, using locked nucleic acids (LNAs) in the probe design. We used these assays to characterize the spatial distribution of lamprey in 18 watersheds of Puget Sound, Washington, by collecting water samples in spring and fall. Pacific Lamprey and Lampetraspp were each detected in 14 watersheds and co-occurred in 10 watersheds. Lamprey eDNA detection rates were much higher in spring compared to fall. Specifically, the Pacific Lamprey eDNA detection rate was 3.5 times higher in spring and the Lampetra spp eDNA detection rate was 1.5 times higher in spring even though larval lamprey are present in streams year-round. This significant finding highlights the importance of seasonality on eDNA detection. Higher stream discharge in the fall likely contributed to reduced eDNA detection rates, although seasonal life history events may have also contributed. These eDNA assays differentiate Pacific Lamprey and Lampetra spp across much of their range along the west coast of North America. Sequence analysis indicates the Pacific Lamprey assay also targets other Entosphenus spp and indicates the Lampetra spp assay may have limited or no capability of detecting Lampetra in some locations south of the Columbia River Basin. Nevertheless, these assays will serve as a valuable tool for resource managers and have direct application to lamprey conservation efforts, such as mapping species distributions, occupancy modeling, and monitoring

Spatial and temporal variations in cadmium concentrations and burdens in the Pacific oyster (Crassostrea gigas) sampled from the Pacific north-west

International Nuclear Information System (INIS)

Bendell, Leah I.; Feng, Cindy

2009-01-01

Oysters from the north-west coast of Canada contain high levels of cadmium, a toxic metal, in amounts that exceed food safety guidelines for international markets. A first required step to determine the sources of cadmium is to identify possible spatial and temporal trends in the accumulation of cadmium by the oyster. To meet this objective, rather than sample wild and cultured oysters of unknown age and origin, an oyster 'grow-out' experiment was initiated. Cultured oyster seed was suspended in the water column up to a depth of 7 m and the oyster seed allowed to mature a period of 3 years until market size. Oysters were sampled bimonthly and at time of sampling, temperature, chlorophyll-a, turbidity and salinity were measured. Oyster total shell length, dry tissue weights, cadmium concentrations (μg g -1 ) and burdens (μg of cadmium oyster -1 ) were determined. Oyster cadmium concentrations and burdens were then interpreted with respect to the spatial and temporal sampling design as well as to the measured physio-chemical and biotic variables. When expressed as a concentration, there was a marked seasonality with concentrations being greater in winter as compared in summer; however no spatial trend was evident. When expressed as a burden which corrects for differences in tissue mass, there was no seasonality, however cadmium oyster burdens increased from south to north. Comparison of cadmium accumulation rates oyster -1 among sites indicated three locations, Webster Island, on the west side of Vancouver Island, and two within Desolation Sound, Teakerne Arm and Redonda Bay, where point sources of cadmium which are not present at all other sampling locations may be contributing to overall oyster cadmium burdens. Of the four physio-chemical factors measured only temperature and turbidity weakly correlated with tissue cadmium concentrations (r 2 = -0.13; p < 0.05). By expressing oyster cadmium both as concentration and burden, regional and temporal patterns were

Spatial and temporal variations in cadmium concentrations and burdens in the Pacific oyster (Crassostrea gigas) sampled from the Pacific north-west.

Science.gov (United States)

Bendell, Leah I; Feng, Cindy

2009-08-01

Oysters from the north-west coast of Canada contain high levels of cadmium, a toxic metal, in amounts that exceed food safety guidelines for international markets. A first required step to determine the sources of cadmium is to identify possible spatial and temporal trends in the accumulation of cadmium by the oyster. To meet this objective, rather than sample wild and cultured oysters of unknown age and origin, an oyster "grow-out" experiment was initiated. Cultured oyster seed was suspended in the water column up to a depth of 7 m and the oyster seed allowed to mature a period of 3 years until market size. Oysters were sampled bimonthly and at time of sampling, temperature, chlorophyll-a, turbidity and salinity were measured. Oyster total shell length, dry tissue weights, cadmium concentrations (microg g(-1)) and burdens (microg of cadmium oyster(-1)) were determined. Oyster cadmium concentrations and burdens were then interpreted with respect to the spatial and temporal sampling design as well as to the measured physio-chemical and biotic variables. When expressed as a concentration, there was a marked seasonality with concentrations being greater in winter as compared in summer; however no spatial trend was evident. When expressed as a burden which corrects for differences in tissue mass, there was no seasonality, however cadmium oyster burdens increased from south to north. Comparison of cadmium accumulation rates oyster(-1) among sites indicated three locations, Webster Island, on the west side of Vancouver Island, and two within Desolation Sound, Teakerne Arm and Redonda Bay, where point sources of cadmium which are not present at all other sampling locations may be contributing to overall oyster cadmium burdens. Of the four physio-chemical factors measured only temperature and turbidity weakly correlated with tissue cadmium concentrations (r(2)=-0.13; p<0.05). By expressing oyster cadmium both as concentration and burden, regional and temporal patterns were

X-ray fluorescent analysis on Indo-Pacific glass beads from Sungai Mas archaeological sites, Kedah, Malaysia

International Nuclear Information System (INIS)

Zuliskandar Ramli; Nik Hassan Shuhaimi; Nik Abdul Rahman; Abdul Latif Samian

2011-01-01

Sungai Mas was an ancient port-kingdom located on West Coast of Peninsula Malaysia in a district of Kota Kuala Muda, Kedah, Malaysia. The port-kingdom evolved as an entrepot since fifth century AD and continuously visited by international trader from India, China, Middle East and Europe until eighteenth century AD. Sungai Mas was also one of the Indo-Pacific beads making centers in Southeast Asia since sixth to thirteenth century AD and also produced pottery and brick. X-ray fluorescent analysis (XRF) on Sungai Mas Indo-Pacific beads is carried out to determine whether the glass beads originated from Arikamedu, India or locally made by community in Sungai Mas. Totally, twenty-two samples of beads and beads materials assayed by XRF were chosen. Contents of nine major elements and nine trace elements, which might be present of flux, stabilizer, colorants or opacifier were examined. The elements Si, Na, K, Ca, Fe, Al, Ti, Mn, Mg, Cu, Pb, Zr, Sr, Ba, La, U, Ni and Cr were detectable in all samples. The concentration of elements found are discussed in terms of flux, silica or lead base glass, color and/or opacity of the glass beads and glass samples. The result showed that Sungai Mas produced their own Indo-Pacific beads from sixth to thirteenth century AD. (author)

Fiji in the South Pacific.

Science.gov (United States)

Scott, Rosalind; Semaan, Leslie

This text introduces Fiji and other island nations located in the Pacific, the world's largest ocean. Cut off from the world by vast expanses of water, these people developed a unique culture. Contents include: Teacher Overview, Geography of the South Pacific Islands, History of the South Pacific, Fiji, Traditional Village Life, Yaquna Ceremony,…

Intraseasonal variability in the far-east pacific: investigation of the role of air-sea coupling in a regional coupled model

Energy Technology Data Exchange (ETDEWEB)

Small, R.J. [Naval Research Laboratory, Jacobs Technology, Stennis Space Center, MS (United States); University of Hawaii, International Pacific Research Center, POST 401, Honolulu, HI (United States); Xie, Shang-Ping [University of Hawaii, International Pacific Research Center, POST 401, Honolulu, HI (United States); University of Hawaii, Department of Meteorology, School of Ocean and Earth Science and Technology, Honolulu, HI (United States); Maloney, Eric D. [Colorado State University, Department of Atmospheric Science, Fort Collins, CO (United States); Szoeke, Simon P. de [Oregon State University, College of Oceanic and Atmospheric Sciences, Corvallis, OR (United States); Miyama, Toru [Frontier Research for Global Change, Yokohama (Japan)

2011-03-15

Intraseasonal variability in the eastern Pacific warm pool in summer is studied, using a regional ocean-atmosphere model, a linear baroclinic model (LBM), and satellite observations. The atmospheric component of the model is forced by lateral boundary conditions from reanalysis data. The aim is to quantify the importance to atmospheric deep convection of local air-sea coupling. In particular, the effect of sea surface temperature (SST) anomalies on surface heat fluxes is examined. Intraseasonal (20-90 day) east Pacific warm-pool zonal wind and outgoing longwave radiation (OLR) variability in the regional coupled model are correlated at 0.8 and 0.6 with observations, respectively, significant at the 99% confidence level. The strength of the intraseasonal variability in the coupled model, as measured by the variance of outgoing longwave radiation, is close in magnitude to that observed, but with a maximum located about 10 further west. East Pacific warm pool intraseasonal convection and winds agree in phase with those from observations, suggesting that remote forcing at the boundaries associated with the Madden-Julian oscillation determines the phase of intraseasonal convection in the east Pacific warm pool. When the ocean model component is replaced by weekly reanalysis SST in an atmosphere-only experiment, there is a slight improvement in the location of the highest OLR variance. Further sensitivity experiments with the regional atmosphere-only model in which intraseasonal SST variability is removed indicate that convective variability has only a weak dependence on the SST variability, but a stronger dependence on the climatological mean SST distribution. A scaling analysis confirms that wind speed anomalies give a much larger contribution to the intraseasonal evaporation signal than SST anomalies, in both model and observations. A LBM is used to show that local feedbacks would serve to amplify intraseasonal convection and the large-scale circulation. Further

Monsoon rainfall over India in June and link with northwest tropical pacific - June ISMR and link with northwest tropical pacific

Science.gov (United States)

Surendran, Sajani; Gadgil, Sulochana; Rajendran, Kavirajan; Varghese, Stella Jes; Kitoh, Akio

2018-03-01

Recent years have witnessed large interannual variation of all-India rainfall (AIR) in June, with intermittent large deficits and excesses. Variability of June AIR is found to have the strongest link with variation of rainfall over northwest tropical Pacific (NWTP), with AIR deficit (excess) associated with enhancement (suppression) of NWTP rainfall. This association is investigated using high-resolution Meteorological Research Institute model which shows high skill in simulating important features of Asian summer monsoon, its variability and the inverse relationship between NWTP rainfall and AIR. Analysis of the variation of NWTP rainfall shows that it is associated with a change in the latitudinal position of subtropical westerly jet over the region stretching from West of Tibetan Plateau (WTP) to NWTP and the phase of Rossby wave steered in it with centres over NWTP and WTP. In years with large rainfall excess/deficit, the strong link between AIR and NWTP rainfall exists through differences in Rossby wave phase steered in the jet. The positive phase of the WTP-NWTP pattern, with troughs over WTP and west of NWTP, tends to be associated with increased rainfall over NWTP and decreased AIR. This scenario is reversed in the opposite phase. Thus, the teleconnection between NWTP rainfall and AIR is a manifestation of the difference in the phase of Rossby wave between excess and deficit years, with centres over WTP and NWTP. This brings out the importance of prediction of phase of Rossby waves over WTP and NWTP in advance, for prediction of June rainfall over India.

Obesity and Native Hawaiians/Pacific Islanders

Science.gov (United States)

... Population Profiles > Native Hawaiian/Other Pacific Islander > Obesity Obesity and Native Hawaiians/Pacific Islanders Native Hawaiians/Pacific ... youthonline . [Accessed 08/18/2017] HEALTH IMPACT OF OBESITY People who are overweight are more likely to ...

Indian summer monsoon rainfall variability during 2014 and 2015 and associated Indo-Pacific upper ocean temperature patterns

Science.gov (United States)

Kakatkar, Rashmi; Gnanaseelan, C.; Chowdary, J. S.; Parekh, Anant; Deepa, J. S.

2018-02-01

In this study, factors responsible for the deficit Indian Summer Monsoon (ISM) rainfall in 2014 and 2015 and the ability of Indian Institute of Tropical Meteorology-Global Ocean Data Assimilation System (IITM-GODAS) in representing the oceanic features are examined. IITM-GODAS has been used to provide initial conditions for seasonal forecast in India during 2014 and 2015. The years 2014 and 2015 witnessed deficit ISM rainfall but were evolved from two entirely different preconditions over Pacific. This raises concern over the present understanding of the role of Pacific Ocean on ISM variability. Analysis reveals that the mechanisms associated with the rainfall deficit over the Indian Subcontinent are different in the two years. It is found that remote forcing in summer of 2015 due to El Niño is mostly responsible for the deficit monsoon rainfall through changes in Walker circulation and large-scale subsidence. In the case of the summer of 2014, both local circulation with anomalous anticyclone over central India and intrusion of mid-latitude dry winds from north have contributed for the deficit rainfall. In addition to the above, Tropical Indian Ocean (TIO) sea surface temperature (SST) and remote forcing from Pacific Ocean also modulated the ISM rainfall. It is observed that Pacific SST warming has extended westward in 2014, making it a basin scale warming unlike the strong El Niño year 2015. The eastern equatorial Indian Ocean is anomalously warmer than west in summer of 2014, and vice versa in 2015. These differences in SST in both tropical Pacific and TIO have considerable impact on ISM rainfall in 2014 and 2015. The study reveals that initializing coupled forecast models with proper upper ocean temperature over the Indo-Pacific is therefore essential for improved model forecast. It is important to note that the IITM-GODAS which assimilates only array for real-time geostrophic oceanography (ARGO) temperature and salinity profiles could capture most of the

A Breeding Population of the Western Pacific Crab Hemigrapsus sanguineus (Crustacea: Decapoda: Grapsidae) Established on the Atlantic Coast of North America.

Science.gov (United States)

McDermott, J J

1991-08-01

The west Pacific grapsid crab Hemigrapsus sanguineus was found in the United States for the first time in 1988. Additional crabs were recovered in 1990 from Townsends Inlet and Cape May Harbor, New Jersey (22 males, 16 females), and four of the females collected from June through September were ovigerous. Thus, H. sanguineus has now established itself in southern New Jersey, the first well-documented case of an exotic brachyuran becoming established along the east coast of the United States.

A review of the biology and conservation of the Cope's giant salamander Dicamptodon copei Nussbaum, 1970 (Amphibia: Caudata: Dicamptodontidae) in the Pacific northwestern region of the USA

Science.gov (United States)

Alex D. Foster; Deanna H. Olson; Lawrence L.C. Jones

2015-01-01

The Cope’s Giant Salamander Dicamptodon copei is a stream dwelling amphibian reliant on cool streams, native to forested areas primarily west of the crest of the Cascade Range in the Pacific Northwest region, USA. Unlike other members of the genus, adult D. copei are most often found in a paedomorphic form, and rarely transforms to a terrestrial stage. As a result,...

Phylogeography of herbarium specimens of asexually propagated paper mulberry [Broussonetia papyrifera (L.) L'Hér. ex Vent. (Moraceae)] reveals genetic diversity across the Pacific.

Science.gov (United States)

Payacan, Claudia; Moncada, Ximena; Rojas, Gloria; Clarke, Andrew; Chung, Kuo-Fang; Allaby, Robin; Seelenfreund, Daniela; Seelenfreund, Andrea

2017-09-01

Paper mulberry or Broussonetia papyrifera (L.) L'Hér. ex Vent. (Moraceae) is a dioecious species native to continental South-east Asia and East Asia, including Taiwan, that was introduced to the Pacific by pre-historic voyagers and transported intentionally and propagated asexually across the full range of Austronesian expansion from Taiwan to East Polynesia. The aim of this study was to gain insight into the dispersal of paper mulberry into Oceania through the genetic analysis of herbaria samples which represent a more complete coverage of the historical geographical range of the species in the Pacific before later introductions and local extinctions occurred. DNA from 47 herbarium specimens of B. papyrifera collected from 1882 to 2006 from different islands of the Pacific was obtained under ancient DNA protocols. Genetic characterization was based on the ribosomal internal transcribed spacer ITS-1 sequence, a sex marker, the chloroplast ndhF-rpl32 intergenic spacer and a set of ten microsatellites developed for B. papyrifera. Microsatellites allowed detection of 15 genotypes in Near and Remote Oceanian samples, in spite of the vegetative propagation of B. papyrifera in the Pacific. These genotypes are structured in two groups separating West and East Polynesia, and place Pitcairn in a pivotal position. We also detected the presence of male plants that carry the Polynesian chloroplast DNA (cpDNA) haplotype, in contrast to findings in contemporary B. papyrifera populations where only female plants bear the Polynesian cpDNA haplotype. For the first time, genetic diversity was detected among paper mulberry accessions from Remote Oceania. A clear separation between West and East Polynesia was found that may be indicative of pulses during its dispersal history. The pattern linking the genotypes within Remote Oceania reflects the importance of central Polynesia as a dispersal hub, in agreement with archaeological evidence. © The Author 2017. Published by Oxford

Shewanella loihica sp. nov., isolated from iron-rich microbial mats in the Pacific Ocean.

Science.gov (United States)

Gao, Haichun; Obraztova, Anna; Stewart, Nathan; Popa, Radu; Fredrickson, James K; Tiedje, James M; Nealson, Kenneth H; Zhou, Jizhong

2006-08-01

A novel marine bacterial strain, PV-4(T), isolated from a microbial mat located at a hydrothermal vent of Loihi Seamount in the Pacific Ocean, has been characterized. This micro-organism is orangey in colour, Gram-negative, polarly flagellated, facultatively anaerobic and psychrotolerant (temperature range, 0-42 degrees C). No growth was observed with nitrate, nitrite, DMSO or thiosulfate as the electron acceptor and lactate as the electron donor. The major fatty acid detected in strain PV-4(T) was iso-C(15 : 0). Strain PV-4(T) had ubiquinones consisting mainly of Q-7 and Q-8, and possessed menaquinone MK-7. The DNA G+C content of the strain was 53.8 mol% and the genome size was about 4.5 Mbp. Phylogenetic analyses based on 16S rRNA gene sequences placed PV-4(T) within the genus Shewanella. PV-4(T) exhibited 16S rRNA gene sequence similarity levels of 99.6 and 97.5 %, respectively, with respect to the type strains of Shewanella aquimarina and Shewanella marisflavi. DNA from strain PV-4(T) showed low mean levels of relatedness to the DNAs of S. aquimarina (50.5 %) and S. marisflavi (8.5 %). On the basis of phylogenetic and phenotypic characteristics, the bacterium was classified in the genus Shewanella within a distinct novel species, for which the name Shewanella loihica sp. nov. is proposed. The type strain is PV-4(T) (=ATCC BAA-1088(T)=DSM 17748(T)).

Species profiles: Life histories and environmental requirements of coastal fishes and invertebrates (Pacific Northwest)--ghost and blue mud shrimp

Science.gov (United States)

Hornig, S.; Sterling, A.; Smith, Styles

1989-01-01

Geographic range: The ghost shrimp is found in intertidal areas along the west coast of North America from Mutiny Bay, Alaska, to the mouth of the Tijuana River, San Diego County, California; MacGinitie (1934) and Ricketts and Calvin (1968) reported finding specimens as far south as El Estuario de Punto Banda, Baja California Norte, Mexico. The blue mud shrimp is found from southeastern Alaska to San Quentin Bay (Bahia de San Quentin) in Baja California Norte. The general distribution of the two species in the Pacific Northwest is identical (Figure 3).

Zoogeography of the San Andreas Fault system: Great Pacific Fracture Zones correspond with spatially concordant phylogeographic boundaries in western North America.

Science.gov (United States)

Gottscho, Andrew D

2016-02-01

The purpose of this article is to provide an ultimate tectonic explanation for several well-studied zoogeographic boundaries along the west coast of North America, specifically, along the boundary of the North American and Pacific plates (the San Andreas Fault system). By reviewing 177 references from the plate tectonics and zoogeography literature, I demonstrate that four Great Pacific Fracture Zones (GPFZs) in the Pacific plate correspond with distributional limits and spatially concordant phylogeographic breaks for a wide variety of marine and terrestrial animals, including invertebrates, fish, amphibians, reptiles, birds, and mammals. These boundaries are: (1) Cape Mendocino and the North Coast Divide, (2) Point Conception and the Transverse Ranges, (3) Punta Eugenia and the Vizcaíno Desert, and (4) Cabo Corrientes and the Sierra Transvolcanica. However, discussion of the GPFZs is mostly absent from the zoogeography and phylogeography literature likely due to a disconnect between biologists and geologists. I argue that the four zoogeographic boundaries reviewed here ultimately originated via the same geological process (triple junction evolution). Finally, I suggest how a comparative phylogeographic approach can be used to test the hypothesis presented here. © 2014 Cambridge Philosophical Society.

A Pacific hydrographic section at 88°W: Water-property distribution

Science.gov (United States)

Tsuchiya, Mizuki; Talley, Lynne D.

1998-06-01

Full-depth conductivity-temperature-depth (CTD)/hydrographic measurements with high horizontal and vertical resolution were made in February-April 1993 along a line lying at a nominal longitude of 88°W and extending from southern Chile (54°S) to Guatemala (14°N). It crossed five major deep basins (Southeast Pacific, Chile, Peru, Panama, and Guatemala basins) east of the East Pacific Rise. Vertical sections of potential temperature, salinity, potential density, oxygen, silica, phosphate, nitrate, and nitrite are presented to illustrate the structure of the entire water column. Some features of interest found in the sections are described, and an attempt is made to interpret them in terms of the isopycnal property distributions associated with the large-scale ocean circulation. These features include: various near-surface waters observed in the tropical and subtropical regions and the fronts that mark the boundaries of these waters; the possible importance of salt fingering to the downward salt transfer from the high-salinity subtropical water; a shallow thermostad (pycnostad) developed at 16°-18.5°C in the subtropical water; low-salinity surface water in the subantarctic zone west of southern Chile; large domains of extremely low oxygen in the subpycnocline layer on both sides of the equator and a secondary nitrite maximum associated with a nitrate minimum in these low-oxygen domains; high-salinity, low-oxygen, high-nutrient subpycnocline water that is carried poleward along the eastern boundary by the Peru-Chile Undercurrent; the Subantarctic Mode and Antarctic Intermediate waters; middepth isopycnal property extrema observed at the crest of the Sala y Gomez Ridge; influences of the North Pacific and the North Atlantic upon deep waters along the section; and the characteristics and sources of the bottom waters in the five deep basins along the section.

Aquimarina hainanensis sp. nov., isolated from diseased Pacific white shrimp Litopenaeus vannamei larvae.

Science.gov (United States)

Zheng, Yanfen; Wang, Yanan; Liu, Yan; Li, Wentao; Yu, Mingchao; Zhang, Xiao-Hua

2016-01-01

One novel Gram-stain-negative, long rod-shaped, non-spore-forming, non-motile, non-flagellated and strictly aerobic strain, designated M124T, was isolated from diseased Pacific white shrimp Litopenaeus vannamei larvae. Growth occurred at 16-37 °C (optimum 28 °C), in the presence of 2-5 % (w/v) NaCl (optimum 3 %) and at pH 7-8 (optimum pH 7). Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain M124T belonged to the genus Aquimarina and showed highest sequence similarity to Aquimarina penaei P3-1T (96.4 %). The dominant fatty acids of the isolate were iso-C15 : 0 and iso-C17 : 0 3-OH. The major polar lipids comprised phosphatidylethanolamine, one unknown aminolipid, three unknown phospholipids, two unknown glycolipids and one unknown polar lipid. The major respiratory quinone was menaquinone 6 (MK-6). The DNA G+C content of strain M124T was 33.7 mol%. Based on the polyphasic analyses in this study, strain M124T is considered to represent a novel species of the genus Aquimarina, for which the name Aquimarina hainanensis sp. nov. is proposed. The type strain is M124T ( = KCTC 42423T = MCCC 1K00498T).

ENSO surface shortwave radiation forcing over the tropical Pacific

Directory of Open Access Journals (Sweden)

K. G. Pavlakis

2008-09-01

Full Text Available We have studied the spatial and temporal variation of the downward shortwave radiation (DSR at the surface of the Earth during ENSO events for a 21-year period over the tropical and subtropical Pacific Ocean (40° S–40° N, 90° E–75° W. The fluxes were computed using a deterministic model for atmospheric radiation transfer, along with satellite data from the ISCCP-D2 database, reanalysis data from NCEP/NCAR for the key atmospheric and surface input parameters, and aerosol parameters from GADS (acronyms explained in main text. A clear anti-correlation was found between the downward shortwave radiation anomaly (DSR-A time-series, in the region 7° S–5° N 160° E–160° W located west of the Niño-3.4 region, and the Niño-3.4 index time-series. In this region where the highest in absolute value DSR anomalies are observed, the mean DSR anomaly values range from −45 Wm⁻² during El Niño episodes to +40 Wm⁻² during La Niña events. Within the Niño-3.4 region no significant DSR anomalies are observed during the cold ENSO phase in contrast to the warm ENSO phase. A high correlation was also found over the western Pacific (10° S–5° N, 120–140° E, where the mean DSR anomaly values range from +20 Wm⁻² to −20 Wm⁻² during El Niño and La Niña episodes, respectively. There is also convincing evidence that the time series of the mean downward shortwave radiation anomaly in the off-equatorial western Pacific region 7–15° N 150–170° E, precedes the Niño-3.4 index time-series by about 7 months and the pattern of this anomaly is indicative of ENSO operating through the mechanism of the western Pacific oscillator. Thus, the downward shortwave radiation anomaly is a complementary index to the SST anomaly for the study of ENSO events and can be used to assess whether or not El Niño or La Niña conditions prevail.

Utilization of statistical table for waves in North-west Pacific Ocean and a long-term estimation on hull responses; Seihoku Taiheiyo haro tokeihyo no riyo to sentai oto choki yosoku

Energy Technology Data Exchange (ETDEWEB)

Shinkai, A [Kyushu University, Fukuoka (Japan). Faculty of Engineering

1997-10-01

Designing a vessel to sail oceans for an extended period of time requires statistical estimation on different hull responses to waves. To meet the requirement, it is necessary to accurately identify hydrographic conditions (particularly waves) which are considered to be encountered by the vessel. This paper makes clear the statistical characteristics of the wave statistics table presented by Fang et al, and compares them with other processes for discussion. This statistics collection is based on data collected in China, Hong Kong and Japan, including those collected in the Sea of Japan, the Yellow Sea, the North Sea, the East China Sea and the South China Sea. It was found that these data provide results slightly lower than the long-term estimation values derived from data of the global wave statistics (GWS) prepared by Hogben et al. The cause for this was found attributable to the format of the statistical data, especially setting of wave height classes. However, since the data provided by Fang et al include items of detailed information on small sea areas near the Chinese coast lines, the data are thought to provide useful information source in investigating long-term hull response characteristics relative to spatial spread of the sea areas in the North-west Pacific Ocean. 15 refs., 5 figs., 2 tabs.

Columbia River system operation review: Final environmental impact statement. Appendix R, Pacific Northwest Coordination agreement (PNCA)

International Nuclear Information System (INIS)

1995-11-01

Currently, the Federal government coordinates the planning and operation of the Federal Columbia River Power System (FCRPS) with projects owned and operated by the region's non-Federal hydrogenerating utilities pursuant to the Pacific North-west Coordination Agreement (PNCA). The Bureau of Reclamation (Reclamation), the Corps of Engineers (Corps), and the Bonneville Power Administration (BPA) are parties to the PNCA on behalf of the government of the United States. The PNCA is a complex agreement that provides an opportunity for the region's power producers to maximize the power system's reliability and economy while meeting their multiple-use objectives. The PNCA does not dictate the operation of the resources it coordinates. It is essentially an accounting mechanism that exchanges the power produced among the parties in order to improve the reliability of the system and reduce regional power costs. Project owners retain complete autonomy to operate as needed to meet their multiple-use requirements. The PNCA was executed in 1964 as an important component of regional plans to maximize the Northwest's hydro resource capability. Maximization also included the development of storage projects on the Columbia River in Canada pursuant to the terms of the 1964 Columbia River Treaty. Because of the link between power coordination and Treaty issues, the current parties to the PNCA, currently are contemplating entering into a replacement or renewed power coordination agreement. Because the power coordination agreement is a consensual arrangement, its ultimate provisions must be acceptable to all of its signatories. This Appendix R to the Final Environmental Impact Statement of the Columbia River System is a presentation of the Pacific North-west Coordination Agreement

Culex pipiens, an experimental efficient vector of West Nile and Rift Valley fever viruses in the Maghreb region.

Directory of Open Access Journals (Sweden)

Fadila Amraoui

Full Text Available West Nile fever (WNF and Rift Valley fever (RVF are emerging diseases causing epidemics outside their natural range of distribution. West Nile virus (WNV circulates widely and harmlessly in the old world among birds as amplifying hosts, and horses and humans as accidental dead-end hosts. Rift Valley fever virus (RVFV re-emerges periodically in Africa causing massive outbreaks. In the Maghreb, eco-climatic and entomologic conditions are favourable for WNV and RVFV emergence. Both viruses are transmitted by mosquitoes belonging to the Culex pipiens complex. We evaluated the ability of different populations of Cx. pipiens from North Africa to transmit WNV and the avirulent RVFV Clone 13 strain. Mosquitoes collected in Algeria, Morocco, and Tunisia during the summer 2010 were experimentally infected with WNV and RVFV Clone 13 strain at titers of 10(7.8 and 10(8.5 plaque forming units/mL, respectively. Disseminated infection and transmission rates were estimated 14-21 days following the exposure to the infectious blood-meal. We show that 14 days after exposure to WNV, all mosquito st developed a high disseminated infection and were able to excrete infectious saliva. However, only 69.2% of mosquito strains developed a disseminated infection with RVFV Clone 13 strain, and among them, 77.8% were able to deliver virus through saliva. Thus, Cx. pipiens from the Maghreb are efficient experimental vectors to transmit WNV and to a lesser extent, RVFV Clone 13 strain. The epidemiologic importance of our findings should be considered in the light of other parameters related to mosquito ecology and biology.

CalWater 2 - Precipitation, Aerosols, and Pacific Atmospheric Rivers Experiment

Science.gov (United States)

Spackman, J. R.; Ralph, F. M.; Prather, K. A.; Cayan, D. R.; DeMott, P. J.; Dettinger, M. D.; Fairall, C. W.; Leung, L. R.; Rosenfeld, D.; Rutledge, S. A.; Waliser, D. E.; White, A. B.

2014-12-01

Emerging research has identified two phenomena that play key roles in the variability of the water supply and the incidence of extreme precipitation events along the West Coast of the United States. These phenomena include the role of (1) atmospheric rivers (ARs) in delivering much of the precipitation associated with major storms along the U.S. West Coast, and (2) aerosols—from local sources as well as those transported from remote continents—and their modulating effects on western U.S. precipitation. A better understanding of these processes is needed to reduce uncertainties in weather predictions and climate projections of extreme precipitation and its effects, including the provision of beneficial water supply. This presentation summarizes the science objectives and strategies to address gaps associated with (1) the evolution and structure of ARs including cloud and precipitation processes and air-sea interaction, and (2) aerosol interaction with ARs and the impact on precipitation, including locally-generated aerosol effects on orographic precipitation along the U.S. West Coast. Observations are proposed for multiple winter seasons as part of a 5-year broad interagency vision referred to as CalWater 2 to address these science gaps (http://esrl.noaa.gov/psd/calwater). In January-February 2015, a field campaign has been planned consisting of a targeted set of aircraft and ship-based measurements and associated evaluation of data in near-shore regions of California and in the eastern Pacific. In close coordination with NOAA, DOE's Atmospheric Radiation Measurement (ARM) program is also contributing air and shipborne facilities for ACAPEX (ARM Cloud Aerosol and Precipitation Experiment), a DOE-sponsored study complementing CalWater 2. Ground-based measurements from NOAA's HydroMeteorological Testbed (HMT) network in California and aerosol chemical instrumentation at Bodega Bay, California have been designed to add important near surface-level context for the

Radioactive zinc ( sup 65 Zn), zinc, cadmium, and mercury in the Pacific Hake, Merluccius productus (Ayres), off the West Coast of the United States

Energy Technology Data Exchange (ETDEWEB)

Naidu, J.R.

1974-06-01

The Pacific Hake, Merluccius productus (Ayers) was used to monitor the waters off Puget Sound and the West Coast of the US for zinc(Zn), cadmium(Cd), mercury(Hg) and {sup 65}Zn. The Columbia River is not the source of Zn, Cd or Hg contamination, but is the source of {sup 65}Zn, with the concentration in the Hake reflecting the position of the Columbia River plume. Zn and Cd accumulation in the Hake were fit to the equation Y=B{sub 1}+B{sub 2}e{sup B}{sub 3}X where Y is the concentration of the element and X is the length or weight of the fish. Biological attributes were assigned to the other parameters as follows: B{sub 1} is the asymptotic value for Zn or Cd at chemical maturity; B{sub 2} is the location of the curve with respect to the length or weight of the fish; and B{sub 3} is a constant pertaining to the rate of change of Zn or Cd. Although Zn, Cd and Hg are all Group 2B elements, only the concentrations of Zn and Cd were correlated for all locations; Hg concentrations varied as a function of location. Zn and Cd concentrations increase with fish size and approach an asymptotic value at maturity, while Hg concentrations were linear and the slope is a function of sampling location. Zn and Cd levels are regulated in the adult, while Hg continues to increase with age. It may be significant that the age distribution of fish caught commercially coincides with the maximum concentration of Zn and Cd. 195 refs., 30 figs., 10 tabs. (MHB)

Phylogenetic analysis of West Nile virus isolated in Italy in 2008.

Science.gov (United States)

Savini, G; Monaco, F; Calistri, P; Lelli, R

2008-11-27

In Italy the first occurrence of West Nile virus (WNV) infection was reported in Tuscany region during the late summer of 1998. In August 2008, the WNV infection re-emerged in Italy, in areas surrounding the Po river delta, and involving three regions Lombardy, Emilia Romagna and Veneto. WNV was isolated from blood and organs samples of one horse, one donkey, one pigeon (Columba livia) and three magpies (Pica pica). The phylogenetic analysis of the isolates, conducted on 255 bp in the region coding for the E protein, indicates that these isolates belong to the lineage I among the European strains. According to the analysis, both the 1998 and 2008 Italian strains as well as isolates from Romania, Russia, Senegal and Kenya fell in the same sub-cluster.

Commonwealth Local Government Forum Pacific Project

Directory of Open Access Journals (Sweden)

Terry Parker

2008-04-01

Full Text Available The Commonwealth Local Government Forum (CLGF Pacific Project works with local government and other stakeholders in nine Pacific Island countries – Cook Islands, Fiji Islands, Kiribati, Samoa, Papua New Guinea, Solomon Islands, Tonga, Tuvalu and Vanuatu. It seeks to strengthen local democracy and good governance, and to help local governments deal with the increasing challenges of service delivery and urban management in the unique Pacific environment. Human settlement patterns in the region are changing rapidly. The Pacific has traditionally been a rural agricultural/subsistence society, but this is no longer the case. The accelerated pace of urbanisation has impacted significantly on Pacific nations and in the very near future the majority of Pacific Islanders will be found in urban areas. Already over 50% of Fiji’s population are urban dwellers. Rapid urbanisation brings with it unique challenges and opportunities. Local governments are at the forefront of this phenomenon, with the responsibility to manage urban development and the transition from rural areas to cities and towns. Their success or failure to manage urbanisation and provide the required levels of physical and social infrastructure will affect many lives in a new urban Pacific. The project now has three components – the main Pacific Regional Project and two country-specific programmes: the Honiara City Council Institutional Capacity Building Project and the Commonwealth Local Government Good Practice Scheme in Papua New Guinea.

West and East

Directory of Open Access Journals (Sweden)

Alexander Rappaport

2017-12-01

Full Text Available The topic “West-East” has a clear cultural and historical meaning. Orthodox temples face East. The way from West to East and from East to West is tens of thousands of kilometers long and has a special meaning. It differs from the way from North to South: the horizontal axes connect regions, while the vertical axis (Earth-Sky connects the worlds. The expansion of Eurasian tribes occurred along the East-West axis – the world horizontal way. Today the cultural memory of people in the East and West finds itself in the theatre of new dramas of existence and new forces. With the advances in electronic technologies, the world movements seem to have sunk in the depth of the chthonian past to come up anew to the surface of fantastic speeds and momentary connections. A new type of planetary landscape-space relation appears, giving no place for West and East.

In vitro screening of probiotic properties of Saccharomyces cerevisiae var. boulardii and food-borne Saccharomyces cerevisiae strains

DEFF Research Database (Denmark)

van der Aa Kuhle, Alis; Skovgaard, Kerstin; Jespersen, Lene

2005-01-01

.6-16.8%) recorded for two isolates from blue veined cheeses. Merely 25% of the S. cerevisiae var. boulardii strains displayed good adhesive properties (16.2-28.0%). The expression of the proinflammatory cytokine IL-1α decreased strikingly in IPEC-J2 cells exposed to a Shiga-like toxin 2e producing Escherichia coli...... strain when the cells were pre- and coincubated with S. cerevisiae var. boulardii even though this yeast strain was low adhesive (5.4%), suggesting that adhesion is not a mandatory prerequisite for such a probiotic effect. A strain of S. cerevisiae isolated from West African sorghum beer exerted similar......The probiotic potential of IS Saccharomyces cerevisiae strains used for production of foods or bevel-ages or isolated from such, and eight strains of Saccharomyces cerevisiae var. boulardii, was investigated. All strains included were able to withstand pH 2.5 and 0.3% Ox-all. Adhesion...

A pandemic Vibrio parahaemolyticus O3:K6 clone causing most associated diarrhea cases in the Pacific Northwest coast of Mexico

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Lucio De Jesus Hernández-Díaz

2015-03-01

Full Text Available Between September and October of 2004, more than 1230 cases of gastroenteritis due to pandemic O3:K6 strains of Vibrio parahaemolyticus (V. parahaemolyticus were reported in the relatively small geographical area of Southern Sinaloa, a state located in Northwest Mexico. Since then, V. parahaemolyticus-associated gastroenteritis cases have gradually increased in prevalence spreading from south to north. The present study conducted an epidemiological surveillance of V. parahaemolyticus strains in both environmental and clinical samples along the Pacific coast of Sinaloa from 2011 to 2013. The genetic relatedness, serotype dominance and antibiotic resistance of isolates were investigated. A total of 46 strains were isolated from environmental samples (e.g., sediment, seawater and shrimp, whereas 249 strains were obtained from stools of patients with gastroenteritis. Nine different O serogroups and 16 serovars were identified. Serovars O3:K6 and O6:K46 were identified in both environmental and clinical strains. Whereas most environmental isolates carried the tdh gene (71.74%, 33/46, only three (6.52% belonged to pandemic clones (O3:K6, O3:KUT and OUT:KUT. In contrast, 81.1% (202/249 of clinical isolates belonged to pandemic serotypes, with O3:K6 (tdh, toxRS/new, and/or orf8 representing the predominant serovar (97%, 196/202. This prevalence of pathogenic (tdh and/or trh positive and O3:K6 pandemic V. parahaemolyticus isolates in this study were similar to those found from 2004-2010. As investigated by REP-PCR, genetic lineages of selected O3:K6 strains isolated in this study and some isolated earlier were nearly identical. Antimicrobial susceptibility testing showed that most strains (93.8% were resistant to ampicillin but sensitive to chloramphenicol (98.8%. Multidrug resistance significantly increased from 8.6% (2004-2010 to 22.93% (2011-2013 (p< 0.05. Our data indicate that pandemic O3:K6 clone has endemically established in the Pacific Coast of

Wagging the Pacific Dog by its Indian Tail? : A west Indian Ocean Precursor to El Niño

NARCIS (Netherlands)

Wieners, C.E.

2018-01-01

Cool Sea Surface Temperature (SST) anomalies tend to prevail in the Seychelles Dome region (Southwest Indian Ocean, NE of Madagascar) during the Northern hemisphere summer-autumn 1.5 years before El Niño. This West Indian Ocean precursor might potentially help to predict El Niño/Southern Oscillation

First Indo-Pacific fish species from the Black Sea coast of Turkey: Shrimp scad Alepes djedaba (Forsskål, 1775 (Carangidae

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Cemal Turan

2017-11-01

Full Text Available One specimen of shrimp scad Alepes djedaba (Forsskål, 1775 was caught by using fish net at a depth of 30 m on 11 October 2017 from Sinop Bay, the West Black Sea. With the present study, A. djedaba is first lessepsian fish species in the Black Sea coast of Turkey. The migration of IndoPacific species to the Black Sea indicate that climate change is getting an important issue both for marine biodiversity and fisheries in the Black Sea.

Late Pliocene Depositional History and Paleoclimate Reconstructions of the Southwest Pacific

Science.gov (United States)

Royce, B.; Patterson, M. O.; Pietras, J.

2017-12-01

Drift deposits off the eastern margin of New Zealand are important archives for the paleoclimate and paleoceanographic history of the southwest Pacific. Ocean Drilling Program (ODP) Site 1123 is located on the North Chatham rise drift just North of the westerly wind driven Subtropical Front (STF) and provides a record of near continuous sediment deposition since the Miocene along the southwest Pacific deep western boundary current (DWBC). While the Miocene and Late Pleistocene portion of this record have been well studied, the Late Pliocene record is less well developed. Southern Ocean geological records demonstrate that Late Pliocene cooling is the transient time bracketing the warmer than present Early Pliocene and bipolar glaciation at 2.7 Ma. A newly developed, robust, and astronomically tuned long-term record of benthic δ13C from ODP Site 1123 spanning the Early to Late Pliocene implies a reduction in Southern Ocean ventilation and lowering of preformed values from waters sourced along the Antarctic margin during the Late Pliocene. Thus, Late Pliocene Southern Hemisphere cooling and sea ice expansion may have drastically reduced outgassing and increased the burial of heat into the deep ocean. South Atlantic records off the west coast of Africa demonstrate an increase in the flux of iron to the open ocean during this time potentially enhancing surface ocean productivity and providing an additional cooling mechanism. Currently, atmospheric transport of dust to the Southern Ocean is dominated by persistent mid-latitude circumpolar westerly winds; this is particularly relevant for dust sourced from New Zealand. The Late Pliocene to Early Pleistocene uplift of the North Island axial ranges and South Island southern alps potentially provided a greater amount of not only sediment to the deep ocean, but also wind blow dust to the Pacific sector of the Southern Ocean. We will present a detailed high-resolution sedimentological study on the development of the Chatham

21 CFR 161.170 - Canned Pacific salmon.

Science.gov (United States)

2010-04-01

... 21 Food and Drugs 2 2010-04-01 2010-04-01 false Canned Pacific salmon. 161.170 Section 161.170... § 161.170 Canned Pacific salmon. (a) Identity. (1) Canned Pacific salmon is the food prepared from one... forms of canned Pacific salmon are processed from fish prepared by removing the head, gills, and tail...

Gastric cancer incidence and mortality is associated with altitude in the mountainous regions of Pacific Latin America.

Science.gov (United States)

Torres, Javier; Correa, Pelayo; Ferreccio, Catterina; Hernandez-Suarez, Gustavo; Herrero, Rolando; Cavazza-Porro, Maria; Dominguez, Ricardo; Morgan, Douglas

2013-02-01

In Latin America, gastric cancer is a leading cancer, and countries in the region have some of the highest mortality rates worldwide, including Chile, Costa Rica, and Colombia. Geographic variation in mortality rates is observed both between neighboring countries and within nations. We discuss epidemiological observations suggesting an association between altitude and gastric cancer risk in Latin America. In the Americas, the burden of gastric cancer mortality is concentrated in the mountainous areas along the Pacific rim, following the geography of the Andes sierra, from Venezuela to Chile, and the Sierra Madre and Cordillera de Centroamérica, from southern Mexico to Costa Rica. Altitude is probably a surrogate for host genetic, bacterial, dietary, and environmental factors that may cluster in the mountainous regions. For example, H. pylori strains from patients of the Andean Nariño region of Colombia display European ancestral haplotypes, whereas strains from the Pacific coast are predominantly of African origin. The observation of higher gastric cancer rates in the mountainous areas is not universal: the association is absent in Chile, where risk is more strongly associated with the age of H. pylori acquisition and socio-economic determinants. The dramatic global and regional variations in gastric cancer incidence and mortality rates offer the opportunity for scientific discovery and focused prevention programs.

Comparative Study on the Electrical Properties of the Oceanic Mantle Beneath the Northwest Pacific Ocean

Science.gov (United States)

Toh, H.

2013-12-01

We have been conducting long-term seafloor electromagnetic (EM) observations at two sites in the northwest Pacific since 2001. The older site was established at the deep seafloor (~5600m) on the northwest Pacific basin (Site NWP), while the new one was installed on the west Philippine basin (Site WPB) in 2006 at the slightly deeper (~5700m) seafloor. The ages of the oceanic basins at those sites are approximately 129 Ma for Site NWP (Shipboard Scientific Party of ODP Leg 191, 2000) and 49 Ma for Site WPB (Salisbury et al., 2006), respectively. The EM instruments deployed at those sites are seafloor EM stations (SFEMS; Toh et al., 2004 and 2006) and capable of measuring vector EM fields at the seafloor for as long as one year or more with other physical quantities such as the instruments' attitude, orientation and temperature. One of the objectives of the seafloor long-term EM observations by SFEMSs is to make a comparative study of the oceanic mantle with and without influence of the so-called 'stagnant slabs' in terms of their electrical conductivity. It is anticipated that the mantle transition zone under the influence of the stagnant slab has a higher electrical conductivity because the transition zone there could be wetter than that in the absence of the stagnant slab. In this context, the mantle transition zone beneath Site WPB can be said to have influence by the stagnant slab, while that beneath Site NWP does not. It, therefore, is basically possible to estimate how much water is present in each transition zone by comparison of the electrical conductivity profiles of the two. The one-dimensional electrical profile beneath Site NWP has been derived so far using the magnetotelluric (MT) and geomagnetic depth sounding (GDS) methods with significant jumps in the electrical property at 410 and 660km discontinuities. The jumps are approximately factors of 10 and 2, respectively (Ichiki et al., 2009). Here we show a profile beneath Site WPB using both MT and GDS

78 FR 7385 - Western Pacific Fisheries; Fishing in the Marianas Trench, Pacific Remote Islands, and Rose Atoll...

Science.gov (United States)

2013-02-01

...-BA98 Western Pacific Fisheries; Fishing in the Marianas Trench, Pacific Remote Islands, and Rose Atoll... Presidential proclamations that created the Marianas Trench, Pacific Remote Islands, and Rose Atoll Marine..., 2009). Proclamation 8337 of January 6, 2009, ``Establishment of the Rose Atoll Marine National Monument...

Effectiveness of composts and Trichoderma strains for control of Fusarium wilt of tomato

Directory of Open Access Journals (Sweden)

Yousra TAGHDI

2015-09-01

Full Text Available Fusarium wilt caused by Fusarium oxysporum f. sp. lycopersici (FOL is a major limiting disease in tomato production in Morocco. Commercial and locally produced Moroccan composts and peat were found to reduce Fusarium wilt in tomato plants. We explored the presence of Trichoderma strains in these materials, and in six soils sampled in the North West of Morocco, where a low incidence of Fusarium wilt had been previously observed. The most abundant Trichoderma-like fungus was selected from each soil, compost or peat sample. Twelve Trichoderma strains were isolated and identified molecularly. Trichoderma asperellum CT9 and Trichoderma virens ST11 showed the greatest overall antagonistic activity against FOL, Rhizoctonia solani, Botrytis cinerea and Pythium ultimum. The three strains evaluated in in planta tests, CT9, ST11 and T. virens ST10, reduced tomato Fusarium wilt, and strain ST11  also promoted growth of tomato plants.

Madden-Julian Oscillation (MJO) Signal over Kototabang, West Sumatera Based on the Mini Automatic Weather Station (MAWS) Data Analysis Using the Wavelet Technique

Science.gov (United States)

Hermawan, E.

2018-04-01

This study is mainly concerned an application of Mini Automatic Weather Station (MAWS) at Kototabang, West Sumatera nearby the location of an Equatorial Atmosphere Radar (EAR) side. We are interest to use this data to investigate the propagation of the Madden-Julian Oscillation (MJO). We examined of daily MAWS data for 3 years observations started from January 2001 to Mei 2004. By applying wavelet analysis, we found the MJO at Kototabang have 32 days oscillations as shown in Fig.1 below. In this study, we concentrate just for local mechanis only. We will show in this paper that at the phase of the MJO with a dipole structure to the convection anomalies, there is enhanced tropical convection over the eastern Indian Ocean and reduced convection over the western Pacific. Over the equatorial western Indian Ocean, the equatorial Rossby wave response to the west of the enhanced convection includes a region of anomalous surface divergence associated with the anomalous surface westerlies and pressure ridge. This tends to suppress ascent in the boundary layer and shuts off the deep convection, eventually leading to a convective anomaly of the opposite sign. Over the Indonesian sector, the equatorial Kelvin wave response to the east of the enhanced convection includes a region of anomalous surface convergence into the anomalous equatorial surface easterlies and pressure trough, which will tend to favour convection in this region. The Indonesian sector is also influenced by an equatorial Rossby wave response (of opposite sign) to the west of the reduced convection over the western Pacific, which also has a region of anomalous surface convergence associated with its anomalous equatorial surface easterlies and pressure trough. Hence, convective anomalies of either sign tend to erode themselves from the west and initiate a convective anomaly of opposite sign via their equatorial Rossby wave response, and expand to the east via their equatorial Kelvin wave response.

Oceanographic data - Integrated acoustic and trawl survey of Pacific hake off the Pacific Coast

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Integrated acoustic and trawl surveys are used to assess the distribution, biomass, and biology of Pacific hake along the Pacific coasts of the United States and...

Biological data - Integrated acoustic and trawl survey of Pacific hake off the Pacific Coast

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Integrated acoustic and trawl surveys are used to assess the distribution, biomass, and biology of Pacific hake along the Pacific coasts of the United States and...

Biotransformation of Tributyltin chloride by Pseudomonas stutzeri strain DN2

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Dnyanada S. Khanolkar

2014-12-01

Full Text Available A bacterial isolate capable of utilizing tributyltin chloride (TBTCl as sole carbon source was isolated from estuarine sediments of west coast of India and identified as Pseudomonas stutzeri based on biochemical tests and Fatty acid methyl ester (FAME analysis. This isolate was designated as strain DN2. Although this bacterial isolate could resist up to 3 mM TBTCl level, it showed maximum growth at 2 mM TBTCl in mineral salt medium (MSM. Pseudomonas stutzeri DN2 exposed to 2 mM TBTCl revealed significant alteration in cell morphology as elongation and shrinkage in cell size along with roughness of cell surface. FTIR and NMR analysis of TBTCl degradation product extracted using chloroform and purified using column chromatography clearly revealed biotransformation of TBTCl into Dibutyltin dichloride (DBTCl2 through debutylation process. Therefore, Pseudomonas stutzeri strain DN2 may be used as a potential bacterial strain for bioremediation of TBTCl contaminated aquatic environmental sites.

Biotransformation of Tributyltin chloride by Pseudomonas stutzeri strain DN2

Science.gov (United States)

Khanolkar, Dnyanada S.; Naik, Milind Mohan; Dubey, Santosh Kumar

2014-01-01

A bacterial isolate capable of utilizing tributyltin chloride (TBTCl) as sole carbon source was isolated from estuarine sediments of west coast of India and identified as Pseudomonas stutzeri based on biochemical tests and Fatty acid methyl ester (FAME) analysis. This isolate was designated as strain DN2. Although this bacterial isolate could resist up to 3 mM TBTCl level, it showed maximum growth at 2 mM TBTCl in mineral salt medium (MSM). Pseudomonas stutzeri DN2 exposed to 2 mM TBTCl revealed significant alteration in cell morphology as elongation and shrinkage in cell size along with roughness of cell surface. FTIR and NMR analysis of TBTCl degradation product extracted using chloroform and purified using column chromatography clearly revealed biotransformation of TBTCl into Dibutyltin dichloride (DBTCl2) through debutylation process. Therefore, Pseudomonas stutzeri strain DN2 may be used as a potential bacterial strain for bioremediation of TBTCl contaminated aquatic environmental sites. PMID:25763027

Exploring the role of Micronesian islands in the maintenance of coral genetic diversity in the Pacific Ocean.

Science.gov (United States)

Davies, S W; Treml, E A; Kenkel, C D; Matz, M V

2015-01-01

Understanding how genetic diversity is maintained across patchy marine environments remains a fundamental problem in marine biology. The Coral Triangle, located in the Indo-West Pacific, is the centre of marine biodiversity and has been proposed as an important source of genetic diversity for remote Pacific reefs. Several studies highlight Micronesia, a scattering of hundreds of small islands situated within the North Equatorial Counter Current, as a potentially important migration corridor. To test this hypothesis, we characterized the population genetic structure of two ecologically important congeneric species of reef-building corals across greater Micronesia, from Palau to the Marshall Islands. Genetic divergences between islands followed an isolation-by-distance pattern, with Acropora hyacinthus exhibiting greater genetic divergences than A. digitifera, suggesting different migration capabilities or different effective population sizes for these closely related species. We inferred dispersal distance using a biophysical larval transport model, which explained an additional 15-21% of the observed genetic variation compared to between-island geographical distance alone. For both species, genetic divergence accumulates and genetic diversity diminishes with distance from the Coral Triangle, supporting the hypothesis that Micronesian islands act as important stepping stones connecting the central Pacific with the species-rich Coral Triangle. However, for A. hyacinthus, the species with lower genetic connectivity, immigration from the subequatorial Pacific begins to play a larger role in shaping diversity than input from the Coral Triangle. This work highlights the enormous dispersal potential of broadcast-spawning corals and identifies the biological and physical drivers that influence coral genetic diversity on a regional scale. © 2014 John Wiley & Sons Ltd.

Technological properties and probiotic potential of Lactobacillus fermentum strains isolated from West African fermented millet dough

DEFF Research Database (Denmark)

Owusu-Kwarteng, James; Tano-Debrah, Kwaku; Akabanda, Fortune

2015-01-01

resistance to bile salts, bile salt hydrolysis, antimicrobial property, haemolysis and antibiotics resistance. L. fermentum strains clustered into 3 groups represented by 36 %, 47 % and 17 % as fast, medium and slow acidifiers respectively. About 8 %, 78 % and 14 % of the strains showed strong, weak...... activity was observed towards Listeria monocytogenes and Staphylococcus aureus but not E. coli and Salmonella enteritidis. Lactobacillus fermentum strains were generally susceptible to antibiotics except 6 strains which showed resistance towards streptomycin, gentamicin and kanamycin. CONCLUSION: In vitro...... good candidates for further studies to elucidate their full potential and possible application as novel probiotic starter cultures....

Genetic characterization of Mycobacterium tuberculosis in the West Bank, Palestinian Territories

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Ereqat Suheir

2012-06-01

Full Text Available Abstract Background The World Health Organization (WHO declared human tuberculosis (TB a global health emergency and launched the “Global Plan to Stop Tuberculosis” which aims to save a million lives by 2015. Global control of TB is increasingly dependent on rapid and accurate genetic typing of species of the Mycobacterium tuberculosis (MTB complex including M. tuberculosis. The aim of this study was to identify and genetically characterize the MTB isolates circulating in the West Bank, Palestinian Territories. Genotyping of the MTB isolates from patients with pulmonary TB was carried out using two molecular genetic techniques, spoligotyping and mycobacterial interspersed repetitive units-variable number of tandem repeat (MIRU-VNTR supported by analysis of the MTB specific deletion 1 (TbD1. Findings A total of 17 MTB patterns were obtained from the 31 clinical isolates analyzed by spoligotyping; corresponding to 2 orphans and 15 shared-types (SITs. Fourteen SITs matched a preexisting shared-type in the SITVIT2 database, whereas a single shared-type SIT3348 was newly created. The most common spoligotyping profile was SIT53 (T1 variant, identified in 35.5 % of the TB cases studied. Genetic characterization of 22 clinical isolates via the 15 loci MIRU-VNTR typing distinguished 19 patterns. The 15-loci MIT144 and MIT145 were newly created within this study. Both methods determined the present of M. bovis strains among the isolates. Conclusions Significant diversity among the MTB isolates circulating in the West Bank was identified with SIT53-T1 genotype being the most frequent strain. Our results are used as reference database of the strains circulating in our region and may facilitate the implementation of an efficient TB control program.

Pacific Hake - Growth and natal origin of Pacific hake from the Georgia Basin DPS

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Pacific hake (Merluccius productus) is an abundant species residing along the Pacific coast from the Gulf of California to the Strait of Georgia. It is the most...

Pacific Coastal Salmon Recovery Fund

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Congress established the Pacific Coastal Salmon Recovery Fund (PCSRF) to monitor the restoration and conservation of Pacific salmon and steelhead populations and...

Chronic Liver Disease and Asian Americans/Pacific Islanders

Science.gov (United States)

... Cancer Asian/Pacific Islander Women Non-Hispanic White Women Asian/Pacific Islander/ Non-Hispanic White Ratio All Sites ... Cancer Asian/Pacific Islander Women Non-Hispanic White Women Asian/Pacific Islander/ Non-Hispanic White Ratio Liver & IBD* ...

Biological and phylogenetic characteristics of yellow fever virus lineages from West Africa.

Science.gov (United States)

Stock, Nina K; Laraway, Hewád; Faye, Ousmane; Diallo, Mawlouth; Niedrig, Matthias; Sall, Amadou A

2013-03-01

The yellow fever virus (YFV), the first proven human-pathogenic virus, although isolated in 1927, is still a major public health problem, especially in West Africa where it causes outbreaks every year. Nevertheless, little is known about its genetic diversity and evolutionary dynamics, mainly due to a limited number of genomic sequences from wild virus isolates. In this study, we analyzed the phylogenetic relationships of 24 full-length genomes from YFV strains isolated between 1973 and 2005 in a sylvatic context of West Africa, including 14 isolates that had previously not been sequenced. By this, we confirmed genetic variability within one genotype by the identification of various YF lineages circulating in West Africa. Further analyses of the biological properties of these lineages revealed differential growth behavior in human liver and insect cells, correlating with the source of isolation and suggesting host adaptation. For one lineage, repeatedly isolated in a context of vertical transmission, specific characteristics in the growth behavior and unique mutations of the viral genome were observed and deserve further investigation to gain insight into mechanisms involved in YFV emergence and maintenance in nature.

ENSO dynamics and seasonal cycle in the tropical Pacific as simulated by the ECHAM4/OPYC3 coupled general circulation model

Energy Technology Data Exchange (ETDEWEB)

Bacher, A. [Max-Planck-Institut fuer Meteorologie, Hamburg (Germany); Oberhuber, J.M. [Deutsches Klimarechenzentrum (DKRZ), Hamburg (Germany); Roeckner, E. [Max-Planck-Institut fuer Meteorologie, Hamburg (Germany)

1996-07-01

The new version of the atmospheric general circulation model, ECHAM4, at the Max Planck Institute for Meteorology, Hamburg, has been coupled to the OPYC3 isopycnic global ocean general circulation and sea ice model (Oberhuber 1993) in a multi-century present-day climate simulation. Nonseasonal constant flux adjustment for heat and freshwater was employed to ensure a long-term annual mean state close to present day climatology. This paper examines the simulated upper ocean seasonal cycle and interannual variability in the tropical Pacific for the first 100 years. The coupled model`s seasonal cycle of tropical Pacific SSTs is in good agreement with the observations with respect to both the warm pool variation and the Central and Eastern Pacific, with significant errors (up to -2 K) only in the cold tongue around April. The cold phase cold tongue extent and strength is as observed, and for this the heat flux adjustment does not play the decisive role; corrections beyond {+-}40 Wm{sup -2} are rare and only occupy small areas, such as near coasts. A well established south Pacific convergence zone is characteristic for the new AGCM version. Apart from extending the south-east trades seasonal maximum to midbasin, windstress pattern and strength are well captured. The subsurface structure is overall consistent with the observed, with a realistically sharp thermocline at about 150 m depth in the west and rising to the surface from 160 W to 100 W.

The Tectonic Boundary Between Eastern Subbaisin and South-West Subbasin of the South China Sea Revealed from the Normalized Magnetic Source Strength

Science.gov (United States)

Guo, L.; Meng, X.

2014-12-01

The South China Sea (SCS), surrounded by the Eurasia, Pacific and India-Australia plates, is one of the largest marginal seas in the Western Pacific. It was formed by the interaction of the three plates and the seafloor spreading during Late Oligocene time to Early Miocene time. The boundary between Eastern Subbaisin and South-west Subbasin of the SCS has long been debated in the literature. Refining the boundary is one of the crucial tasks for correctly understanding the seafloor spreading model of the SCS. Due to few drills on the deep ocean basin of the SCS, magnetic data become important information for refining the boundary. However, the interpretation of magnetic data in the SCS suffers from the remanent magnetization of ocean crust as well as igneous rock and seamounts. The conventional reduction-to-pole anomalies at low latitudes usually neglect the remanent magnetization, making the interpretation incorrect. Here, we assembled high-resolution total magnetic intensity (TMI) data around the ocean basin of the SCS, and then did a special transformation of the TMI anomalies with a varying magnetic inclinations algorithm to obtain the normalized source strength (NSS). The NSS has advantage of insensitivity to remanent magnetization, benefitting correct interpretation. The NSS presents discriminative features from east to west in the ocean basin. The boundary of the discriminative features is clear and just ranges from the northeastern edge of the Zhongsha Islands running in the southeast direction to the northeastern edge of the Reed Bank. These imply that magnetic structure and tectonic features in the crust are discriminative between both sides of this boundary. It can be deduced that this boundary is the tectonic boundary between Eastern Subbaisin and South-west Subbasin. We acknowledge the financial support of the National Natural Science Foundation of China (41374093) and the SinoProbe-01-05 project.

9th Pacific Basin Nuclear Conference. Nuclear energy, science and technology - Pacific partnership. Proceedings Volume 1

International Nuclear Information System (INIS)

1994-04-01

The theme of the 9th Pacific Basin Nuclear conference held in Sydney from 1-6 May 1994, embraced the use of the atom in energy production and in science and technology. The focus was on selected topics of current and ongoing interest to countries around the Pacific Basin. The two-volume proceedings include both invited and contributed papers. They have been indexed separately. This document, Volume 1 covers the following topics: Pacific partnership; perspectives on nuclear energy, science and technology in Pacific Basin countries; nuclear energy and sustainable development; economics of the power reactors; new power reactor projects; power reactor technology; advanced reactors; radioisotope and radiation technology; biomedical applications

2010 Ecological Survey of the Pacific Northwest National Laboratory Site

Energy Technology Data Exchange (ETDEWEB)

Chamness, Michele A.; Perry, Christopher; Downs, Janelle L.; Powell, Sylvia D.

2011-02-16

The U.S. Department of Energy (DOE) Pacific Northwest Site Office (PNSO) oversees and manages the DOE contract for the Pacific Northwest National Laboratory (PNNL), a DOE Office of Science multi-program laboratory located in Richland, Washington. PNSO is responsible for ensuring that all activities conducted on the PNNL Site comply with applicable laws, policies, and DOE orders. The DOE Pacific Northwest Site Office Cultural and Biological Resources Management Plan (DOE/PNSO 2008) addresses the requirement for annual surveys and monitoring for species of concern and to identify and map invasive species. In addition to the requirement for an annual survey, proposed project activities must be reviewed to assess any potential environmental consequences of conducting the project. The assessment process requires a thorough understanding of the resources present, the potential impacts of a proposed action to those resources, and the ultimate consequences of those actions. The PNNL Site is situated on the southeastern corner of the DOE Hanford Site, located at the north end of the city of Richland in south-central Washington. The site is bordered on the east by the Columbia River, on the west by Stevens Drive, and on the north by the Hanford Site 300 Area (Figure 1). The environmental setting of the PNNL Site is described in Larson and Downs (2009). There are currently two facilities on the PNNL Site: the William R. Wiley Environmental Molecular Sciences Laboratory (EMSL), and the recently completed Physical Sciences Facility (PSF). This report describes the results of the annual survey of the biological resources found on the undeveloped portions of the PNNL Site in 2010. A brief description of the methods PNNL ecologists used to conduct the surveys and the results of the surveys are presented. Actions taken to fully delineate noxious weed populations discovered in 2009 and efforts in 2010 to control those weeds also are described. Appendix A provides a list of plant and

Epidemiology of west nile in europe and in the mediterranean basin.

Science.gov (United States)

Calistri, Paolo; Giovannini, Armando; Hubalek, Zdenek; Ionescu, Aurelia; Monaco, Federica; Savini, Giovanni; Lelli, Rossella

2010-04-22

In the last 30 years several cases of West Nile (WN) virus infection were reported in horses and humans in Europe and in the Mediterranean Basin. Most of them were determined by strains of the Lineage 1 included in the European Mediterranean/Kenyan cluster. Strains of this cluster are characterised by a moderate pathogenicity for horses and humans and limited or no pathogenicity for birds. In recent years, however, WN cases determined by strains grouped in the Israeli/American cluster of Lineage 1 or in the lineage 2 have been reported in Hungary and Austria. The role of migrating birds in introducing new viruses to Europe has been often demonstrated. The migratory birds, which may be infected in their African wintering places, carry the virus northward to European sites during spring migrations. In the past, the virus introduction determined occasional cases of WN. In the recent years, new epidemiological scenarios are developing. In few occasions it has been evidenced the capability of WNV strains of overwintering by using local birds and mosquitoes. Species of Culex amongst mosquitoes and magpies (Pica pica), carrion crows (Corvus corone) and rock pigeons (Columba livia) amongst resident birds are the most probable species involved in this hypothetical WND endemic cycle.

Picoplankton diversity in the South-East Pacific Ocean from cultures

Directory of Open Access Journals (Sweden)

F. Le Gall

2008-02-01

Full Text Available In late 2004, the BIOSOPE cruise sailed between the equatorial influenced waters off the Marquesas Islands and the nutrient enriched waters of the Chilean upwelling. Along the way, it explored the Southeast Pacific gyre centred around Easter Island, which is probably the most oligotrophic oceanic region on earth. During this cruise, we undertook a vigorous effort to isolate novel photosynthetic picoplanktonic eukaryotes. Two strategies were attempted on board: enrichment of filtered samples with culture medium and sorting of specific populations by flow cytometry based on size and chlorophyll fluorescence. Over 1900 pre-cultures were started and then further purified by flow cytometry, serial dilution or pipette isolation to yield a total of 212 strains. These strains were characterized morphologically and for more than 50% of them, genetically, through partial sequencing of the 18 S rRNA gene.

Among the characterized strains, the largest number belongs to stramenopiles (Heterokontophyta with a record of 38 strains belonging to the species Pelagomonas calceolata (Pelagophyceae. Strains from the recently described genera Bolidomonas and Florenciella have been re-isolated for the first time since their description. Two other abundant groups are the Chlorophyta, especially Prasinophyceae, and the Haptophyta, especially the genera Phaeocystis and Emiliania. A limited number of heterotrophic flagellates have also been isolated, all of them belonging to groups containing known species. Finally, over a dozen of unicellular cyanobacterial Synechococcus strains have been obtained, some forming unusual short chains.

Overall our strategy was quite successful since it allowed us to isolate a large number of picoplankton strains. Still it failed in two respects. First, apparently very few novel taxa have been obtained. One set of strains is related to Prasinoderma coloniale (Prasinococcales

A report on radioactivity measurements of fish samples from the west coast of Canada

International Nuclear Information System (INIS)

Chen, Jing; Cooke, Michael W.; Mercier, Jean-Francois; Ahier, Brian; Trudel, Marc; Workman, Greg; Wyeth, Malcolm; Brown, Robin

2015-01-01

Even though many studies have shown that radioactive caesium levels in fish caught outside of Japan were below experimental detection limits of a few Bq kg -1 , significant public concern has been expressed about the safety of consuming seafood from the Pacific Ocean following the Fukushima-Daiichi nuclear accident. To address the public concerns, samples of commonly consumed salmon and groundfish harvested from the Canadian west coast in 2013 were analysed for radioactive caesium. None of the fish samples analysed in this study contained any detectable levels of 134 Cs and 137 Cs under given experimental setting with the average detection limit of ∼2 Bq kg -1 . Using a conservative worst-case scenario where all fish samples would contain 137 Cs exactly at the detection limit level and 134 Cs at half of the detection limit level (to account for much shorter half-life of 134 Cs), the resulting radiation dose for people from consumption of this fish would be a very small fraction of the annual dose from exposure to natural background radiation in Canada. Therefore, fish, such as salmon and groundfish, from the Canadian west coast are of no radiological health concern. (authors)

South Pacific Nuclear Free Zone Treaty

International Nuclear Information System (INIS)

1987-03-01

On 8 August 1986 the Protocols to the South Pacific Nuclear Free Zone Treaty were adopted by the South Pacific Forum at its 17 th session, in Suva. The attached texts of the Protocols were formally communicated to the Director General by the Director of the South Pacific Bureau for Economic Co-operation (SPEC) and are herewith being circulated to all Member States for their information pursuant to a request made by the Director of SPEC. Following the deposit of the eighth instrument of ratification, the South Pacific Nuclear Free Zone Treaty entered into force on 11 December 1986 [es

Diabetic Retinopathy in the Asia-Pacific.

Science.gov (United States)

Chua, Jacqueline; Lim, Claire Xin Ying; Wong, Tien Yin; Sabanayagam, Charumathi

2018-01-01

Diabetic retinopathy (DR), the most common complication of diabetes mellitus, is the leading cause of new cases of blindness in middle-aged and elderly in the Asia-Pacific. It has been estimated that 51% of all those with blindness due to DR globally (n = 424,400) and 56% of those with visual impairment due to DR (2.1 million) come from the Asia-Pacific. Prevalence of DR among those with diabetes ranged from 10% in India to 43% in Indonesia within the Asia-Pacific. Awareness of DR among persons with diabetes ranged from 28% to 84%. Most common modifiable risk factors for DR in the Asia-Pacific were hyperglycemia, blood pressure, dyslipidemia, and obesity. Implementation of systematic screening programs for DR and advancement in telemedicine screening methods have increased patient coverage and cost-effectiveness, though there are still numerous factors impeding screening uptake in the low-middle income regions of the Asia-Pacific. Management and treatment of DR in the Asia-Pacific is mainly limited to traditional laser retinopexy, but it is suboptimal despite new clinical approaches such as use of intravitreal anti.vascular endothelial growth factor and steroids due to limited resources. Further research and data are required to structure a more cost-effective public healthcare program and more awareness-building initiatives to increase the effectiveness of DR screening programs. Copyright 2017 Asia-Pacific Academy of Ophthalmology.

Migration for Environmentally Displaced Pacific Peoples: Legal Options in the Pacific Rim

OpenAIRE

Tabucanon, Gil Marvel

2012-01-01

This paper explores the complex relationship between the environment and migration, namely the various protection options available for environmentally-displaced Pacific peoples under the laws of the United States, Canada, Australia, and New Zealand. It seeks to ascertain whether flexibility exists in these countries' domestic laws for environmental migrants from neighboring Pacific countries. It asks if humanitarian and ministerial discretion admissions and preferential admission schemes suf...

Low cloud precipitation climatology in the southeastern Pacific marine stratocumulus region using CloudSat

International Nuclear Information System (INIS)

Rapp, Anita D; Lebsock, Matthew; L’Ecuyer, Tristan

2013-01-01

A climatology of low cloud surface precipitation occurrence and intensity from the new CloudSat 2C-RAIN-PROFILE algorithm is presented from June 2006 through December 2010 for the southeastern Pacific region of marine stratocumulus. Results show that over 70% of low cloud precipitation falls as drizzle. Application of an empirical evaporation model suggests that 50–80% of the precipitation evaporates before it reaches the surface. Segregation of the CloudSat ascending and descending overpasses shows that the majority of precipitation occurs at night. Examination of the seasonal cycle shows that the precipitation is most frequent during the austral winter and spring; however there is considerable regional variability. Conditional rain rates increase from east to west with a maximum occurring in the region influenced by the South Pacific Convergence Zone. Area average rain rates are highest in the region where precipitation rates are moderate, but most frequent. The area average surface rain rate for low cloud precipitation for this region is ∼0.22 mm d −1 , in good agreement with in situ estimates, and is greatly improved over earlier CloudSat precipitation products. These results provide a much-needed quantification of surface precipitation in a region that is currently underestimated in existing satellite-based precipitation climatologies. (letter)

South Pacific Nuclear Free Zone Treaty

International Nuclear Information System (INIS)

1986-02-01

The full text of the South Pacific Nuclear Free Zone Treaty with its Annexes endorsed on 6 August 1985 by the South Pacific Forum (a body comprising the independent and self-governing countries of the South Pacific, namely Australia, the Cook Islands, Fiji, Kiribati, Nauru, New Zealand, Nive, Papua New Guinea, the Solomon Islands, Tonga, Tuvalu, Vanuatu and Western Samoa) is presented

South Pacific Nuclear Free Zone Treaty

International Nuclear Information System (INIS)

1986-02-01

On 6 August 1985 the South Pacific Forum, a body comprising the independent and self-governing countries of the South Pacific (Australia, the Cook Islands, Fiji, Kiribati, Nauru, New Zealand, Niue, Papua New Guinea, the Solomon Islands, Tonga, Tuvalu, Vanuatu and Western Samoa), endorsed the text of the South Pacific Nuclear Free Zone Treaty and opened it for signature [es

South Pacific Nuclear Free Zone Treaty

International Nuclear Information System (INIS)

1986-02-01

On 6 August 1985 the South Pacific Forum, a body comprising the independent and self-governing countries of the South Pacific (Australia, the Cook Islands, Fiji, Kiribati, Nauru, New Zealand, Niue, Papua New Guinea, the Solomon Islands, Tonga, Tuvalu, Vanuatu and Western Samoa), endorsed the text of the South Pacific Nuclear Free Zone Treaty and opened it for signature [ru

Genetic variation and local differences in Pacific cod Gadus macrocephalus around Japan.

Science.gov (United States)

Suda, A; Nagata, N; Sato, A; Narimatsu, Y; Nadiatul, H H; Kawata, M

2017-01-01

The population structure of the Pacific cod Gadus macrocephalus was examined using 15 microsatellite loci and mitochondrial DNA (ND2 region). In total, 274 individuals were sampled from 16 locations around Japan to estimate the level of genetic differentiation and effective population size (N e ). Pairwise F ST , analysis of molecular variance and Bayesian clustering analysis suggested the presence of two genetically distinct groups in waters around Japan, with a higher N e value in the eastern group than in the western group. A possible factor that restricts gene flow between groups may be related to the water temperature differences in the south-western part of the Sea of Japan, where the Tsushima Warm Current flows around the area inhabited by the western group, which may limit migration between the west and east. © 2016 The Fisheries Society of the British Isles.

A New U.S. West Coast Network of Atmospheric River Observatories

Science.gov (United States)

White, A. B.; Wilczak, J. M.; Ayers, T. E.; King, C. W.; Jordan, J. R.; Shaw, W. J.; Flaherty, J. E.; Morris, V. R.

2015-12-01

The West Coast of North America is the gateway to winter storms forming over the Pacific Ocean that deliver most of the precipitation and water supply to the region. Satellites are capable of detecting the concentrated water vapor in these storms (a.k.a. atmospheric rivers) over the oceans, but because of the complex emissivity of land surfaces, fail to do so over land. In addition, these storms often are accompanied by a baroclinically induced low-level jet that drives the moisture up the windward slopes of coastal and inland mountain ranges and produces orographically enhanced precipitation. To date, satellites cannot resolve this important feature. NOAA's Hydrometeorology Testbed (HMT; hmt.noaa.gov) has developed the concept of an atmospheric river observatory (ARO); a collection of ground-based instruments capable of detecting and monitoring the water vapor transport in the low-level jet region. With funding provided by the California Department of Water Resources and U.S. Department of Energy, HMT has installed a picket fence of AROs along the U.S. West Coast. In addition, HMT has developed an award-winning water vapor flux tool that takes advantage of the data collected by the AROs to provide situational awareness and decision support for end users. This tool recently has been updated to include operational weather prediction output. The ARO network and water vapor flux tool will be described in this presentation.

A closer look at the central Pacific El Niño and warm pool migration events from 1982 to 2011

Science.gov (United States)

Kidwell, Autumn; Jo, Young-Heon; Yan, Xiao-Hai

2014-01-01

In recent years, it has been observed that there are different types of El Niño events. The warm events can be divided into two categories: those centered in the central Pacific (CP) and those centered in the eastern Pacific (EP). We examined the variability of western Pacific warm pool (WPWP) horizontal migration and size from January 1982 to December 2011 by applying Ensemble Empirical Mode Decomposition (EEMD) and Hilbert-Huang Spectrum (HHS) to the optimally interpolated sea surface temperature (OISST) data set. The analysis shows that the long-term residual trend of the zonal centroid movement is migrating to the west by 3.78° from the mean location during the past 30 years. The size of the warm pool has also increased 18% during this period. These analysis techniques isolated two separate time series for the migration of the zonal component of the WPWP for both CP and EP events and showed that these two types of El Niño generally operate at different time scales. The EP time series shows the strong traditional EP El Niño and the transition between strong El Niño conditions and La Niña conditions. The CP time series shows that CP El Niños occur more often than EP El Niños. The changes of El Niño type in conjunction with westward drift and increasing warm pool size shows an interesting multidecadal change in the warm pool. Potential mechanisms relating the Pacific Decadal Oscillation to El Niño typologies were also discussed.

Long-Term Seafloor Electromagnetic Observation in the Northwest Pacific May Detect the Vector Geomagnetic Secular Variation

Directory of Open Access Journals (Sweden)

H Toh

2010-03-01

Full Text Available Sea Floor ElectroMagnetic Stations (SFEMSs are now operating at two deep seafloor sites called the 'WPB' and the 'NWP' in the West Philippine Basin and the Northwest Pacific Basin, respectively. One of the main objectives of the SFEMSs is to detect the geomagnetic secular variations on the deep seafloor where long-term geomagnetic observations have not so far been achieved. SFEMSs can measure the absolute geomagnetic total force as well as the geomagnetic vector field with precise attitude monitoring systems. The vector geomagnetic time-series that was observed for more than 5 years revealed that the westward drift of the equatorial dipole dominates in the geomagnetic secular variation at the NWP.

What's West Nile Virus?

Science.gov (United States)

... for Educators Search English Español What's West Nile Virus? KidsHealth / For Kids / What's West Nile Virus? Print en español ¿Qué es el Virus del Nilo Occidental? What exactly is the West ...

Tectonics and Volcanism During the Cretaceous Normal Superchron Seafloor in the Western Pacific Ocean

Science.gov (United States)

O'Brien, E.

2017-12-01

We have conducted an integration study on the origin and evolution of the tectonics and volcanism of seafloor in the Western Pacific Ocean that took place during the Cretaceous Normal Superchron (CNS) where sparse data has so far precluded detailed investigation. We have compiled the latest satellite-based gravity, gravity gradient, and magnetic grids (EMAG2 v.3) for this region. These crustal-scale high-resolution grids suggest that the CNS seafloor contains fossilized lithospheric morphology possibly attributed to the interaction between Cretaceous supervolcanism activity and Mid-Cretaceous Pacific mid ocean ridge systems that have continuously expanded the Pacific Plate. We recognize previously identified fossilized microplates west of the Magellan Rise, short-lived abandoned propagating rifts and fracture zones, all of which show significant rotation of seafloor fabric. In addition to these large scale observations, we have also compiled marine geological information from previously drilled cores and new data from a Kongsberg Topas PS18 Parametric Sub-Bottom Profiler collected on a transect from Honolulu, Hawaii to Apra, Guam acquired during research cruise SKQ2014S2. In particular, the narrow beam and high bandwidth signal of the Topas PS18 sub-bottom profiler provides sonar data of the seabed with a resolution and depth penetration that is unprecedented compared with previously available surveys in the region. A preliminary assessment of this high resolution Topas data allows us to better characterize sub-seafloor sediment properties and identify features, including the Upper Transparent Layer with identifiable pelagic clay and porcelanite-chert reflectors as well as tectonic features such as the westernmost tip of the Waghenaer Fracture Zone.

75 FR 17463 - Key West Bank, Key West, Florida; Notice of Appointment of Receiver

Science.gov (United States)

2010-04-06

... DEPARTMENT OF THE TREASURY Office of Thrift Supervision Key West Bank, Key West, Florida; Notice... section 5(d)(2) of the Home Owners' Loan Act, the Office of Thrift Supervision has duly appointed the Federal Deposit Insurance Corporation as sole Receiver for Key West Bank, Key West, Florida, (OTS No...

The Pacific Ventilated Thermocline and its Influence on the Pacific Decadal Oscillation and Global Warming

Science.gov (United States)

Kuntz, L.; Schrag, D. P.

2017-12-01

Over the past century, global surface temperatures have warmed episodically despite relatively steady increases in radiative forcing. Coincident with these transitions, we identify changes in the structure of the ventilated thermocline in the Pacific as well as changes in the intensity of the equatorial undercurrent. We propose a new mechanism for the Pacific Decadal Oscillation that involves oscillations in the strength of the equatorial undercurrent and may explain multi-decadal variability of global temperatures. We suggest that the oscillation results in a greater or lesser volume of cold water reaching the eastern Pacific, which ultimately leads to a change in the heat flux out of this critical region. By varying the heat flux in the tropical Pacific in model simulations, we reproduce a stepwise pattern of warming that resembles the historical climate record without additional variability in forcing. In addition, the trajectory of the changes in thermocline structure that we now observe in the Pacific looks like it will arrive at the equator in the middle of the next decade, suggesting that the current period of reduced warming (aka "hiatus") will persist through the mid-2020s.

In vitro cytotoxic activity of Brazilian Middle West plant extracts

Directory of Open Access Journals (Sweden)

Talal Suleiman Mahmoud

2011-06-01

Full Text Available Cytotoxic activity of eight plant extracts, native from the Mid-West of Brazil comprising Cerrado, Pantanal and semideciduous forest, was evaluated for MDA-MB-435, SF-295, and HCT-8 cancer cell strains. A single 100 µg.mL-1 dose of each extract was employed with 72 h of incubation for all tests. Doxorubicin (1 µg.mL-1 was used as the positive control and the MTT method was used to detect the activity. Cytotoxicity of distinct polarities was observed in thirty extracts (46%, from different parts of the following species: Tabebuia heptaphylla (Vell. Toledo, Bignoniaceae, Tapirira guianensis Aubl., Anacardiaceae, Myracrodruon urundeuva Allemão, Anacardiaceae, Schinus terebinthifolius Raddi, Anacardiaceae, Gomphrena elegans Mart., Amaranthaceae, Attalea phalerata Mart. ex Spreng., Arecaceae, Eugenia uniflora L., Myrtaceae, and Annona dioica A. St.-Hil., Annonaceae. Extracts of at least two tested cell strains were considered to be highly active since their inhibition rate was over 75%.

Training on Eastern Pacific tropical cyclones for Latin American students

Science.gov (United States)

Farfán, L. M.; Raga, G. B.

2009-05-01

Tropical cyclones are one of the most impressive atmospheric phenomena and their development in the Atlantic and Eastern Pacific basins has potential to affect several Latin-American and Caribbean countries, where human resources are limited. As part of an international research project, we are offering short courses based on the current understanding of tropical cyclones in the Eastern Pacific basin. Our main goal is to train students from higher-education institutions from various countries in Latin America. Key aspects are tropical cyclone formation and evolution, with particular emphasis on their development off the west coast of Mexico. Our approach includes lectures on tropical cyclone climatology and formation, dynamic and thermodynamic models, air-sea interaction and oceanic response, ocean waves and coastal impacts as well as variability and climate-related predictions. In particular, we use a best-track dataset issued by the United States National Hurricane Center and satellite observations to analyze convective patterns for the period 1970-2006. Case studies that resulted in landfall over northwestern Mexico are analyzed in more detail; this includes systems that developed during the 2006, 2007 and 2008 seasons. Additionally, we have organized a human-dimensions symposium to discuss socio-economic issues that are associated with the landfall of tropical cyclones. This includes coastal zone impact and flooding, the link between cyclones and water resources, the flow of weather and climate information from scientists to policy- makers, the role of emergency managers and decision makers, impact over health issues and the viewpoint of the insurance industry.

Geotechnical properties of sediments from North Pacific and Northern Bermuda Rise

International Nuclear Information System (INIS)

Silva, A.J.; Laine, E.P.; Lipkin, J.; Heath, G.R.; Akers, S.A.

1980-01-01

Studies of geotechnical properties for the Sub-seabed Disposal Program have been oriented toward sediment characterization related to effectiveness as a containment media and determination of detailed engineering behavior. Consolidation tests of the deeper samples in the North Pacific clays indicate that the sediment column is normally consolidated. The in-situ coefficient of permeability (k) within the cored depth of 25 meters is relatively constant at 10 -7 cm/sec. Consolidated undrained (CIU) triaxial tests indicate stress-strain properties characteristic of saturated clays with effective angles of friction of 35 0 for smectite and 31 0 for illite. These results are being used in computer modeling efforts. Some general geotechnical property data from the Bermuda Rise are also discussed

Indo-Pacific sea level variability during recent decades

Science.gov (United States)

Yamanaka, G.; Tsujino, H.; Nakano, H.; Urakawa, S. L.; Sakamoto, K.

2016-12-01

Decadal variability of sea level in the Indo-Pacific region is investigated using a historical OGCM simulation. The OGCM driven by the atmospheric forcing removing long-term trends clearly exhibits decadal sea level variability in the Pacific Ocean, which is associated with eastern tropical Pacific thermal anomalies. During the period of 1977-1987, the sea level anomalies are positive in the eastern equatorial Pacific and show deviations from a north-south symmetric distribution, with strongly negative anomalies in the western tropical South Pacific. During the period of 1996-2006, in contrast, the sea level anomalies are negative in the eastern equatorial Pacific and show a nearly north-south symmetric pattern, with positive anomalies in both hemispheres. Concurrently, sea level anomalies in the south-eastern Indian Ocean vary with those in the western tropical Pacific. These sea level variations are closely related to large-scale wind fields. Indo-Pacific sea level distributions are basically determined by wind anomalies over the equatorial region as well as wind stress curl anomalies over the off-equatorial region.

Blueprint Site Boundary West Hawaii

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — This draft shapefile was developed for staff of the NOAA Fisheries Service, Pacific Island Regional Office and the Western Pacific Fishery Management Council. These...

Pacific Hake Characteristics Affecting the Conduct of an Acoustic Clutter Experiment off the West Coast of the United States

Science.gov (United States)

2012-07-04

Blois , L. C. Hufnagle, A. R. Kronlund, J. A. Holmes, and C. D. Wilson, "The 2003 Integrated Acoustic and Trawl Survey of Pacific Hake, Merluccius...Center, Seattle, WA, 2005. 17. Fleischer, G. W., K. D. Cooke, P. H. Ressler, R. E. Thomas, S. K. de Blois , and L. C. Hufnagle, "The 2005 Integrated...Marine Fisheries Service, Northwest Fisheries Science Center, Seattle, WA, 2008. 18. de Blois , S. K., D. Chu, and K. D. Cooke, "Results of the 2007

2011 Annual Ecological Survey: Pacific Northwest National Laboratory Site

Energy Technology Data Exchange (ETDEWEB)

Becker, James M.; Chamness, Michele A.

2012-02-27

The U.S. Department of Energy (DOE) Pacific Northwest Site Office (PNSO) oversees and manages the DOE contract for the Pacific Northwest National Laboratory (PNNL), a DOE Office of Science multi-program laboratory located in Richland, Washington. PNSO is responsible for ensuring that all activities conducted on the PNNL site comply with applicable laws, policies, and DOE Orders. The DOE Pacific Northwest Site Office Cultural and Biological Resources Management Plan (DOE/PNSO 2008) addresses the requirement for annual surveys and monitoring for species of concern and to identify and map invasive species. In addition to the requirement for an annual survey, proposed project activities must be reviewed to assess any potential environmental consequences of conducting the project. The assessment process requires a thorough understanding of the resources present, the potential impacts of a proposed action to those resources, and the ultimate consequences of those actions. The PNNL site is situated on the southeastern corner of the DOE Hanford Site, located at the north end of the city of Richland in south-central Washington. The site is bordered on the east by the Columbia River, on the west by Stevens Drive, and on the north by the Hanford Site 300 Area (Figure 1). The environmental setting of the PNNL site is described in Larson and Downs (2009). There are currently two facilities on the PNNL site: the William R. Wiley Environmental Molecular Sciences Laboratory and the Physical Sciences Facility. This report describes the annual survey of biological resources found on the undeveloped upland portions of the PNNL site. The annual survey is comprised of a series of individual field surveys conducted on various days in late May and throughout June 2011. A brief description of the methods PNNL ecologists used to conduct the baseline surveys and a summary of the results of the surveys are presented. Appendix A provides a list of plant and animal species identified in the

Pacific Northwest regional AGU meeting

Science.gov (United States)

Hyndman, Roy

The 27th Annual Pacific Northwest Regional American Geophysical Union Meeting, held September 25 and 26, 1980, was hosted by the Pacific Geoscience Centre at the Institute of Ocean Sciences, near Victoria, British Columbia. A total of 79 papers was presented to the 150 registrants in six general sessions: seismology; electromagnetic induction; general geophysics; volcanology; hydrology; and oceanography, and in three special symposia: ‘The Queen Charlotte-Fairweather fault system and other active faults of the Pacific Northwest’ ‘Coastal circulation in the northeast Pacific’ and ‘Studies of the eruption of Mount St. Helens.’

The phase differences of the interdecadal variabilities of tropical cyclone activity in the peak and late seasons over the western North Pacific

Science.gov (United States)

Fan, Tingting; Xu, Shibin; Huang, Fei; Zhao, Jinping

2018-04-01

This study compares the interdecadal variations in tropical cyclone (TC) activities over the western North Pacific (WNP) basin during the peak season (July-September) and late season (October-December) of 1955-2014 and explores the possible physical mechanisms behind the variations. Both the peak- and late-season tropical storm (TS) days show distinct interdecadal variations, while the late-season TS days lead the peak-season TS days by approximately 4 years on an interdecadal time scale. The late-season TC activity is related to the east-west sea surface temperature (SST) gradient across the equatorial Pacific. The westerly winds induced by the SST gradient can reduce the vertical wind shear and increase the low-level vorticity, which favors TC genesis over the TC genesis region. The peak-season TC activity appears to relate to the SST gradient between the Indian Ocean and the Central Pacific. The westerly wind induced by the SST gradient can reduce the vertical wind shear and increase the mid-level relative humidity, thereby enhancing the TC activity. The full picture of the interdecadal variation in the WNP TC activity during the peak and late seasons revealed in this study provides a new perspective on the seasonal TC forecasts and future projections.

Salinity fronts in the tropical Pacific Ocean.

Science.gov (United States)

Kao, Hsun-Ying; Lagerloef, Gary S E

2015-02-01

This study delineates the salinity fronts (SF) across the tropical Pacific, and describes their variability and regional dynamical significance using Aquarius satellite observations. From the monthly maps of the SF, we find that the SF in the tropical Pacific are (1) usually observed around the boundaries of the fresh pool under the intertropical convergence zone (ITCZ), (2) stronger in boreal autumn than in other seasons, and (3) usually stronger in the eastern Pacific than in the western Pacific. The relationship between the SF and the precipitation and the surface velocity are also discussed. We further present detailed analysis of the SF in three key tropical Pacific regions. Extending zonally around the ITCZ, where the temperature is nearly homogeneous, we find the strong SF of 1.2 psu from 7° to 11°N to be the main contributor of the horizontal density difference of 0.8 kg/m 3 . In the eastern Pacific, we observe a southward extension of the SF in the boreal spring that could be driven by both precipitation and horizontal advection. In the western Pacific, the importance of these newly resolved SF associated with the western Pacific warm/fresh pool and El Niño southern oscillations are also discussed in the context of prior literature. The main conclusions of this study are that (a) Aquarius satellite salinity measurements reveal the heretofore unknown proliferation, structure, and variability of surface salinity fronts, and that (b) the fine-scale structures of the SF in the tropical Pacific yield important new information on the regional air-sea interaction and the upper ocean dynamics.

Multi-locus phylogeography of the dusky dolphin (Lagenorhynchus obscurus: passive dispersal via the west-wind drift or response to prey species and climate change?

Directory of Open Access Journals (Sweden)

Würsig Bernd

2007-08-01

Full Text Available Abstract Background The dusky dolphin (Lagenorhynchus obscurus is distributed along temperate, coastal regions of New Zealand, South Africa, Argentina, and Peru where it feeds on schooling anchovy, sardines, and other small fishes and squid tightly associated with temperate ocean sea surface temperatures. Previous studies have suggested that the dusky dolphin dispersed in the Southern Hemisphere eastward from Peru via a linear, temperate dispersal corridor provided by the circumpolar west-wind drift. With new mitochondrial and nuclear DNA sequence data, we propose an alternative phylogeographic history for the dusky dolphin that was structured by paleoceanographic conditions that repeatedly altered the distribution of its temperate prey species during the Plio-Pleistocene. Results In contrast to the west-wind drift hypothesis, phylogenetic analyses support a Pacific/Indian Ocean origin, with a relatively early and continued isolation of Peru from other regions. Dispersal of the dusky dolphin into the Atlantic is correlated with the history of anchovy populations, including multiple migrations from New Zealand to South Africa. Additionally, the cooling of the Eastern Equatorial Pacific led to the divergence of anchovy populations, which in turn explains the north-south equatorial transgression of L. obliquidens and the subsequent divergence of L. obscurus in the Southern Hemisphere. Conclusion Overall, our study fails to support the west-wind drift hypothesis. Instead, our data indicate that changes in primary productivity and related abundance of prey played a key role in shaping the phylogeography of the dusky dolphin, with periods of ocean change coincident with important events in the history of this temperate dolphin species. Moderate, short-term changes in sea surface temperatures and current systems have a powerful effect on anchovy populations; thus, it is not infeasible that repeated fluctuations in anchovy populations continue to play

Characteristics and phylogeny of Bacillus cereus strains isolated from Maari, a traditional West African food condiment

DEFF Research Database (Denmark)

Thorsen, Line; Kando, Christine Kere; Sawadogo, Hagrétou

2015-01-01

light on the succession and pathogenic potential of B. cereus species in traditional West African food condiment and clarifies their phylogenetic relatedness to B. cereus biovar anthracis. Future implementation of GMP and HACCP and development of starter cultures for controlled Maari fermentations...

Sea otters in the northern Pacific Ocean

Science.gov (United States)

Bodkin, James L.; Jameson, Ronald J.; Estes, James A.; LaRoe, Edward T.; Farris, Gaye S.; Puckett, Catherine E.; Doran, Peter D.; Mac, Michael J.

1995-01-01

About 250 years ago sea otters (Enhydra lutris) were distributed continuously from central Baja California, north and west along the Pacific Rim to Machatka Peninsula in Russia, and south along the Kuril Island to northern Japan (Kenyon 1969; Fig. 1a). Several hundred thousand sea otters may have occurred in the north Pacific region when commercial hunting began in the 18th century (Riedman and Estes 1990).At least two attributes of the sea otter have influenced humans, likely for as long as they have resided together along the coast of the north Pacific Ocean. First, sea otters rely on a dense fur, among the finest in the world, for insulation in the cold waters of the Pacific Ocean. The demand for sea otter fur led to their near extinction in the 19th century. The fur harvest, begun about 1740 and halted by international treaty in 1911, left surviving colonies, each likely numbering less than a few hundred animals, in California, south-central Alaska, and the Aleutian, Medney, and Kuril Islands (Fig. 1a). These individuals provided the nucleus for the recovery of the species. Today more than 100,000 sea otters occur throughout about 75% of their original range (fig. 1b). Immigration has resulted in near-complete occupation of the Aleutian and Kuril archipelagos and the Alaska peninsula. Successful translocations have resulted in viable populations in southeast Alaska, Washington, and British Columbia. Large amounts of unoccupied habitat remain along the coasts of Russia, Canada, the United States, and Mexico.The second potential source of conflict between sea otters and humans is that sea otters prey on and often limit some benthic invertebrate populations. Because some of these invertebrates are aso used by humans (Estes and VanBlaricom 1985), human perceptions about the effects of sea otter foraging on invertebrates sometimes differ. By limiting populations of herbivorous invertebrates (e.g., sea urchins [Echinoidea]) otters help maintain the integrity of kelp

Sequence analysis of the first C2 subgenogroup strain of enterovirus 71 isolated in Korea.

Science.gov (United States)

Lee, Jung-Ah; Yoon, Young Sil; Hyeon, Ji-Yeon; Yoo, Jung Sik; Lee, Sang-Won; Lee, June-Woo; Lee, Sang-Won

2016-12-01

Enterovirus 71 (EV71) is an important causative agent of hand-foot-and-mouth disease with severe neurological complications, which may lead to death in children. Large outbreaks caused by EV71 have frequently occurred in Asia-Pacific region. In Korea, the outbreaks have been caused by EV71 subgenogroups C3, and C4. Only genogroup C, especially subgenogroup C1, C3, C4, and C5, has been detected by the national enterovirus surveillance system in Korea. This study reports the first isolation of EV71 A1451 strain, which belongs to subgenogroup C2. EV71 was isolated from a Korean patient with meningoencephalitis. Complete genome analysis and phylogenetic analysis was performed to identify the characteristics of the strain. Comparative genome analysis of the A1451 strain indicated that this novel C2 strain is associated with the Taiwan strains, which are recombinant virus combined with subgenogroup C2 and B3. Because the subgenogroup B3 was not previously detected in Korea, the A1451 strain is regarded as an imported recombinant virus. Periodic surveillance of EV71 is required to control the spread of this disease and its introduction from overseas. Copyright © 2016 Elsevier B.V. All rights reserved.

Unprecedented 2015/2016 Indo-Pacific Heat Transfer Speeds Up Tropical Pacific Heat Recharge

Science.gov (United States)

Mayer, Michael; Alonso Balmaseda, Magdalena; Haimberger, Leopold

2018-04-01

El Niño events are characterized by anomalously warm tropical Pacific surface waters and concurrent ocean heat discharge, a precursor of subsequent cold La Niña conditions. Here we show that El Niño 2015/2016 departed from this norm: despite extreme peak surface temperatures, tropical Pacific (30°N-30°S) upper ocean heat content increased by 9.6 ± 1.7 ZJ (1 ZJ = 1021 J), in stark contrast to the previous strong El Niño in 1997/1998 (-11.5 ± 2.9 ZJ). Unprecedented reduction of Indonesian Throughflow volume and heat transport played a key role in the anomalous 2015/2016 event. We argue that this anomaly is linked with the previously documented intensified warming and associated rising sea levels in the Indian Ocean during the last decade. Additionally, increased absorption of solar radiation acted to dampen Pacific ocean heat content discharge. These results explain the weak and short-lived La Niña conditions in 2016/2017 and indicate the need for realistic representation of Indo-Pacific energy transfers for skillful seasonal-to-decadal predictions.

Temperature affects the morphology and calcification of Emiliania huxleyi strains

Science.gov (United States)

Rosas-Navarro, Anaid; Langer, Gerald; Ziveri, Patrizia

2016-05-01

The global warming debate has sparked an unprecedented interest in temperature effects on coccolithophores. The calcification response to temperature changes reported in the literature, however, is ambiguous. The two main sources of this ambiguity are putatively differences in experimental setup and strain specificity. In this study we therefore compare three strains isolated in the North Pacific under identical experimental conditions. Three strains of Emiliania huxleyi type A were grown under non-limiting nutrient and light conditions, at 10, 15, 20 and 25 °C. All three strains displayed similar growth rate versus temperature relationships, with an optimum at 20-25 °C. Elemental production (particulate inorganic carbon (PIC), particulate organic carbon (POC), total particulate nitrogen (TPN)), coccolith mass, coccolith size, and width of the tube element cycle were positively correlated with temperature over the sub-optimum to optimum temperature range. The correlation between PIC production and coccolith mass/size supports the notion that coccolith mass can be used as a proxy for PIC production in sediment samples. Increasing PIC production was significantly positively correlated with the percentage of incomplete coccoliths in one strain only. Generally, coccoliths were heavier when PIC production was higher. This shows that incompleteness of coccoliths is not due to time shortage at high PIC production. Sub-optimal growth temperatures lead to an increase in the percentage of malformed coccoliths in a strain-specific fashion. Since in total only six strains have been tested thus far, it is presently difficult to say whether sub-optimal temperature is an important factor causing malformations in the field. The most important parameter in biogeochemical terms, the PIC : POC ratio, shows a minimum at optimum growth temperature in all investigated strains. This clarifies the ambiguous picture featuring in the literature, i.e. discrepancies between PIC : POC

Climate Change in the Pacific Islands

Science.gov (United States)

Hamnett, Michael P.

Climate change have been a major concern among Pacific Islanders since the late 1990s. During that period, Time Magazine featured a cover story that read: Say Goodbye to the Marshall Islands, Kiribati, and Tuvalu from sea level rise. Since that time, the South Pacific Regional Environment Programme, UN and government agencies and academic researchers have been assessing the impacts of long-term climate change and seasonal to inter-annual climate variability on the Pacific Islands. The consensus is that long-term climate change will result in more extreme weather and tidal events including droughts, floods, tropical cyclones, coastal erosion, and salt water inundation. Extreme weather events already occur in the Pacific Islands and they are patterned. El Niño Southern Oscillation (ENSO) events impact rainfall, tropical cyclone and tidal patterns. In 2000, the first National Assessment of the Consequences of Climate Variability and Change concluded that long-term climate change will result in more El Niño events or a more El Niño like climate every year. The bad news is that will mean more natural disasters. The good news is that El Niño events can be predicted and people can prepare for them. The reallly bad news is that some Pacific Islands are already becoming uninhabitable because of erosion of land or the loss of fresh water from droughts and salt water intrusion. Many of the most vulnerable countries already overseas populations in New Zealand, the US, or larger Pacific Island countries. For some Pacific Islander abandoning their home countries will be their only option.

3-D subduction dynamics in the western Pacific: Mantle pressure, plate kinematics, and dynamic topography.

Science.gov (United States)

Holt, A. F.; Royden, L.; Becker, T. W.; Faccenna, C.

2017-12-01

While it is well established that the slab pull of negatively buoyant oceanic plates is the primary driving force of plate tectonics, the dynamic "details" of subduction have proved difficult to pin down. We use the Philippine Sea Plate region of the western Pacific as a site to explore links between kinematic observables (e.g. topography and plate motions) and the dynamics of the subduction system (e.g. mantle flow, mantle pressure). To first order, the Philippine Sea Plate can be considered to be the central plate of a double slab system containing two slabs that dip in the same direction, to the west. This subduction configuration presents the opportunity to explore subduction dynamics in a setting where two closely spaced slabs interact via subduction-induced mantle flow and stresses transmitted through the intervening plate. We use a 3-D numerical approach (e.g. Holt et al., 2017), augmented by semi-analytical models (e.g. Jagoutz et al., 2017), to develop relationships between dynamic processes and kinematic properties, including plate velocities, lithospheric stress state, slab dip angles, and topography. When combined with subduction zone observables, this allows us to isolate the first order dynamic processes that are in operation in the Philippine Sea Plate region. Our results suggest that positive pressure build-up occurs in the asthenosphere between the two slabs (Izu-Bonin-Mariana and Ryukyu-Nankai), and that this is responsible for producing much of the observed kinematic variability in the region, including the steep dip of the Pacific slab at the Izu-Bonin-Mariana trench, as compared to the flat dip of the Pacific slab north of Japan. We then extend our understanding of the role of asthenospheric pressure to examine the forces responsible for the plate kinematics and dynamic topography of the entire Western Pacific subduction margin(s). References:Holt, A. F., Royden, L. H., Becker, T. W., 2017. Geophys. J. Int., 209, 250-265Jagoutz, O., Royden, L

Vector Competence of American Mosquitoes for Three Strains of Zika Virus.

Directory of Open Access Journals (Sweden)

James Weger-Lucarelli

2016-10-01

Full Text Available In 2015, Zika virus (ZIKV; Flaviviridae; Flavivirus emerged in the Americas, causing millions of infections in dozens of countries. The rapid spread of the virus and the association with disease outcomes such as Guillain-Barré syndrome and microcephaly make understanding transmission dynamics essential. Currently, there are no reports of vector competence (VC of American mosquitoes for ZIKV isolates from the Americas. Further, it is not clear whether ZIKV strains from other genetic lineages can be transmitted by American Aedes aegypti populations, and whether the scope of the current epidemic is in part facilitated by viral factors such as enhanced replicative fitness or increased vector competence. Therefore, we characterized replication of three ZIKV strains, one from each of the three phylogenetic clades in several cell lines and assessed their abilities to be transmitted by Ae. aegypti mosquitoes. Additionally, laboratory colonies of different Culex spp. were infected with an American outbreak strain of ZIKV to assess VC. Replication rates were variable and depended on virus strain, cell line and MOI. African strains used in this study outcompeted the American strain in vitro in both mammalian and mosquito cell culture. West and East African strains of ZIKV tested here were more efficiently transmitted by Ae. aegypti from Mexico than was the currently circulating American strain of the Asian lineage. Long-established laboratory colonies of Culex mosquitoes were not efficient ZIKV vectors. These data demonstrate the capacity for additional ZIKV strains to infect and replicate in American Aedes mosquitoes and suggest that neither enhanced virus replicative fitness nor virus adaptation to local vector mosquitoes seems likely to explain the extent and intensity of ZIKV transmission in the Americas.

Pacific Lamprey Research and Restoration : Annual Report 1997.

Energy Technology Data Exchange (ETDEWEB)

Jackson, Aaron D.; Hatch, Douglas R.; Close, David A.

1998-08-05

The once abundant stocks of Pacific lamprey (Lampetra tridentata) above Bonneville Dam are currently depressed (Close et al. 1995). It is likely that many of the same factors that led to the decline of wild stocks of Columbia River Pacific salmon and steelhead have impacted Pacific lamprey populations as well. The Pacific Lamprey Research and Restoration Project, funded by Bonneville Power Administration, is a cooperative effort between the Confederated Tribes of the Umatilla Indian Reservation, the Columbia River Inter-Tribal Fish Commission, and Oregon State University with the goal to increase Pacific lamprey stocks above Bonneville Dam.

77 FR 45591 - Pacific Fishery Management Council; Public Meeting

Science.gov (United States)

2012-08-01

... Fishery Management Council; Public Meeting AGENCY: National Marine Fisheries Service (NMFS), National... Pacific Fishery Management Council's (Pacific Council) Ad Hoc South of Humbug Pacific Halibut Workgroup..., monitoring, and allocation history of Pacific halibut in the area south of Humbug Mt. DATES: The conference...

Rapid estimation of the moment magnitude of large earthquake from static strain changes

Science.gov (United States)

Itaba, S.

2014-12-01

The 2011 off the Pacific coast of Tohoku earthquake, of moment magnitude (Mw) 9.0, occurred on March 11, 2011. Based on the seismic wave, the prompt report of the magnitude which the Japan Meteorological Agency announced just after earthquake occurrence was 7.9, and it was considerably smaller than an actual value. On the other hand, using nine borehole strainmeters of Geological Survey of Japan, AIST, we estimated a fault model with Mw 8.7 for the earthquake on the boundary between the Pacific and North American plates. This model can be estimated about seven minutes after the origin time, and five minute after wave arrival. In order to grasp the magnitude of a great earthquake earlier, several methods are now being suggested to reduce the earthquake disasters including tsunami (e.g., Ohta et al., 2012). Our simple method of using strain steps is one of the strong methods for rapid estimation of the magnitude of great earthquakes.

Preface: The Oligotrophy to the UlTra-oligotrophy PACific Experiment (OUTPACE cruise, 18 February to 3 April 2015)

Science.gov (United States)

Moutin, Thierry; Michelangelo Doglioli, Andrea; de Verneil, Alain; Bonnet, Sophie

2017-07-01

The overall goal of OUTPACE (Oligotrophy to UlTra-oligotrophy PACific Experiment) was to obtain a successful representation of the interactions between planktonic organisms and the cycle of biogenic elements in the western tropical South Pacific Ocean across trophic and N2 fixation gradients. Within the context of climate change, it is necessary to better quantify the ability of the oligotrophic ocean to sequester carbon through biological processes. OUTPACE was organized around three main objectives, which were (1) to perform a zonal characterization of the biogeochemistry and biological diversity of the western tropical South Pacific during austral summer conditions, (2) to study the production and fate of organic matter (including carbon export) in three contrasting trophic regimes (increasing oligotrophy) with a particular emphasis on the role of dinitrogen fixation, and (3) to obtain a representation of the main biogeochemical fluxes and dynamics of the planktonic trophic network. The international OUTPACE cruise took place between 18 February and 3 April 2015 aboard the RV L'Atalante and involved 60 scientists (30 onboard). The west-east transect covered ˜ 4000 km from the western part of the Melanesian archipelago (New Caledonia) to the western boundary of the South Pacific gyre (French Polynesia). Following an adaptive strategy, the transect initially designed along the 19° S parallel was adapted along-route to incorporate information coming from satellite measurements of sea surface temperature, chlorophyll a concentration, currents, and diazotroph quantification. After providing a general context and describing previous work done in this area, this introductory paper elucidates the objectives of OUTPACE, the implementation plan of the cruise and water mass and climatological characteristics and concludes with a general overview of the other papers that will be published in this special issue.

West Greenlandic Eskimo

DEFF Research Database (Denmark)

Trondhjem, Naja Blytmann; Fortescue, Michael David

West Greenlandic Eskimo. The current situation of the West Greenlandic language as principal means of communication among the majority Greenlandic population will be presented with special emphasis on the northwest hunting district of Upernavik, where traditional marine mammal hunting is still...... the principal economic activity. Research projects and language initiatives currently in progress within Greenland will be touched upon, as will the possibilities of communication with North American Inuit. West Greenlandic is unique among the native languages of the North American Arctic and Sub...

Changing theory, changing role of Coriolis effect - The East-West asymmetry of the Wadati-Benioff seismic zones

Science.gov (United States)

Scalera, Giancarlo

2014-05-01

It is a long history the tale of the recognized asymmetries of the Earth. In 1600 William Gilbert (1544-1603) published De Magnete in which the North and South geomagnetic pole are described. In 1620 Francis Bacon (1561-1628) in the XXVIIth aphorism of the Novum Organum (second part) describes the southern tips of the continents, and many other asymmetries were later described. In 1975 Samuel Warren Carey (1911-2002) stated: Neither north and south, nor east and west are tectonically equivalent. A non exhaustive list of asymmetries of the Earth is: The magnetic polarity; The land-hemisphere and the water-hemisphere; Southern tips of the continents; Larger extension of expanding mid-oceanic ridges on the southern hemisphere; South-eastward trend of younger ages in the long Pacific seafloor volcanic chains; A larger width of the seafloor isochrones bands on the Nazca region; A pear-shaped Earth; etc. It is a few decades that the different slopes of the Wadati-Benioff zones oriented towards the east and west has been enclosed in the list. Under the Americas they have angles of about 30 degrees, while under the Pacific east coasts (Asia, Japan) the angles are steeper (Luyendyk, 1970; Isacks & Barazangi, 1977; and many others). The cause of this difference has been identified in the tidal drag that would cause a global shift of the lithosphere towards west - the so called westward drift (Bostrom, 1971; Stevenson & Turner, 1977; among others). This solution has been many times criticized on the basis of the irrelevance of the tidal forces with respect to viscous friction (Jordan, 1974; Ranalli, 2000; Caputo & Caputo, 2012). Moreover, a simplistic evaluation of the regime of the convective motion in the mantle and of the order of magnitude of the involved forces (viscous, buoyancy, inertial) hastily judges as negligible the role of the Coriolis effect in producing the observed slope differences of the Wadati-Benioff regions. Instead, it is possible to show that changing

Paralytic toxin profile of the marine dinoflagellate Gymnodinium catenatum Graham from the Mexican Pacific as revealed by LC-MS/MS.

Science.gov (United States)

Bustillos-Guzmán, José J; Band-Schmidt, Christine J; Durán-Riveroll, Lorena M; Hernández-Sandoval, Francisco E; López-Cortés, David J; Núñez-Vázquez, Erick J; Cembella, Allan; Krock, Bernd

2015-01-01

The paralytic shellfish toxin (PST) profiles of Gymnodinium catenatum Graham have been reported for several strains from the Pacific coast of Mexico cultured under different laboratory conditions, as well as from natural populations. Up to 15 saxitoxin analogues occurred and the quantity of each toxin depended on the growth phase and culture conditions. Previous analysis of toxin profiles of G. catenatum isolated from Mexico have been based on post-column oxidation liquid chromatography with fluorescence detection (LC-FLD), a method prone to artefacts and non-specificity, leading to misinterpretation of toxin composition. We describe, for the first time, the complete toxin profile for several G. catenatum strains from diverse locations of the Pacific coast of Mexico. The new results confirmed previous reports on the dominance of the less potent sulfocarbamoyl toxins (C1/2); significant differences, however, in the composition (e.g., absence of saxitoxin, gonyautoxin 2/3 and neosaxitoxin) were revealed in our confirmatory analysis. The LC-MS/MS analyses also indicated at least seven putative benzoyl toxin analogues and provided support for their existence. This new toxin profile shows a high similarity (> 80%) to the profiles reported from several regions around the world, suggesting low genetic variability among global populations.

Experimental data developed to support the selection of a treatment process for West Valley alkaline supernatant

Energy Technology Data Exchange (ETDEWEB)

Bray, L.A.; Holton, L.K.; Myers, T.R.; Richardson, G.M.; Wise, B.M.

1984-01-01

At the request of West Valley Nuclear Services Co., Inc., the Pacific Northwest Laboratory (PNL) has studied alternative treatment processes for the alkaline PUREX waste presently being stored in Tank 8D2 at West Valley, New York. Five tasks were completed during FY 1983: (1) simulation and characterization of the alkaline supernatant and sludge from the tank. The radiochemical and chemical distributions between the aqueous and solid phase were determined, and the efficiency of washing sludge with water to remove ions such as Na/sup +/ and SO/sub 4//sup 2 -/ was investigated; (2) evaluation of a sodium tetraphenylboron (Na-TPB) precipitation process to recover cesium (Cs) and a sodium titanate (Na-TiA) sorption process to recover strontium (Sr) and plutonium (Pu) from the West Valley Alkaline supernatant. These processes were previously developed and tested at the US Department of Energy's Savannah River Plant; (3) evaluation of an organic cation-exchange resin (Duolite CS-100) to recover Cs and Pu from the alkaline supernatant followed by an organic macroreticular cation exchange resin (Amberlite IRC-718) to recover Sr; (4) evaluation of an inorganic ion exchanger (Linde Ionsiv IE-95) to recover Cs, Sr, and Pu from the alkaline supernatant; and (5) evaluation of Dowex-1,X8 organic anion exchange resin to recover technetium (Tc) from alkaline supernatant. The findings of these tasks are reported. 21 references, 36 figures, 34 tables.

Seroprevalence and S7 gene characterization of bluetongue virus in the West of Iran

Directory of Open Access Journals (Sweden)

Mohammad Khezri

Full Text Available Aim: The objective of this study was conducted to determine the seroprevalence and S7 gene characterization of BTV of sheep in the West of Iran, during 2007-2008. Materials and Methods: A total 372 sheep blood samples were collected from known seropositive regions in the West of Iran. Anti-BTV antibodies were detected in the serum samples by group specific, c-ELISA. Extractions of the dsRNA from whole blood samples were carried out. The One-step RT-PCR kit was used for the detection of S7 BTV gene in the blood samples. PCR products of the first amplification (RT-PCR were used; template in the nested PCR. Products were separated by 1.2% Agarose gel electrophoresis. Nested PCR products of S7 segment from positive samples and the reference strain; BTV1 (RSA vvvv/01 were prepared for sequencing. All sequences were subjected to multiple sequence alignments and phylogenetic analysis. Results: The results showed widespread presence of the anti-BTV antibodies in the province's sheep population, where 46.77% of the tested sera were positive on ELISA. Bluetongue viruses were diagnosed in some animals by RT-PCR and nested PCR, by targeting S7 segment. This genome segment was sequenced and analyzed in four samples as a conserved gene in BTV serogroup. This group was very similar to the West BTV strains from US, Africa and Europe. This clustered was categorized with BTV4 from Turkey. Conclusion: Increases in epidemic disease may constitute a serious problem for Iran's rural economy in future, and the situation is likely to worsen in the next few years as the proportion of unvaccinated livestock increases. [Vet World 2012; 5(9.000: 549-555

76 FR 20959 - Pacific Fishery Management Council; Public Meeting

Science.gov (United States)

2011-04-14

... Pacific Fishery Management Council (Pacific Council) will convene a Pacific mackerel Stock Assessment... of the meeting is to review the Pacific mackerel stock assessment for 2011, in order to inform... action under Section 305(c) of the Magnuson-Stevens Fishery Conservation and Management Act, provided the...

Asthma and Native Hawaiians/Pacific Islanders

Science.gov (United States)

... Population Profiles > Native Hawaiian/Other Pacific Islander > Asthma Asthma and Native Hawaiians/Pacific Islanders National data for ... very limited. While all of the causes of asthma remain unclear, children exposed to secondhand tobacco smoke ...

Immunizations and Asians and Pacific Islanders

Science.gov (United States)

... and Data > Minority Population Profiles > Asian American > Immunizations Immunizations and Asians and Pacific Islanders Asian/Pacific Islander ... 35 months reached the Healthy People goal for immunizations for hepatitis B, MMR (measles-mumps-rubella), polio ...

Pacific Northwest Salmon Habitat Project Database

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — In the Pacific Northwest Salmon Habitat Project Database Across the Pacific Northwest, both public and private agents are working to improve riverine habitat for a...

Climate Variability and Phytoplankton in the Pacific Ocean

Science.gov (United States)

Rousseaux, Cecile

2012-01-01

The effect of climate variability on phytoplankton communities was assessed for the tropical and sub-tropical Pacific Ocean between 1998 and 2005 using an established biogeochemical assimilation model. The phytoplankton communities exhibited wide range of responses to climate variability, from radical shifts in the Equatorial Pacific, to changes of only a couple of phytoplankton groups in the North Central Pacific, to no significant changes in the South Pacific. In the Equatorial Pacific, climate variability dominated the variability of phytoplankton. Here, nitrate, chlorophyll and all but one of the 4 phytoplankton types (diatoms, cyanobacteria and coccolithophores) were strongly correlated (pphytoplankton groups (chlorophytes and coccolithophores). Ocean biology in the South Pacific was not significantly correlated with MEI. During La Nina events, diatoms increased and expanded westward along the cold tongue (correlation with MEI, r=-0.81), while cyanobacteria concentrations decreased significantly (r=0.78). El Nino produced the reverse pattern, with cyanobacteria populations increasing while diatoms plummeted. The diverse response of phytoplankton in the different major basins of the Pacific suggests the different roles climate variability can play in ocean biology.

CRED 40 m Gridded bathymetry of Howland Island, Pacific Remote Island Areas, Central Pacific (Arc ASCII Format)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Gridded (40 m cell size) bathymetry of the shelf and slope environments of Howland Island, Pacific Remote Island Areas, Central Pacific. Almost complete bottom...

CRED 5 m Gridded bathymetry of Jarvis Island, Pacific Remote Island Areas, Central Pacific (Arc ASCII Format)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Gridded (5 m cell size) bathymetry of the shelf and slope environments of Jarvis Island, Pacific Remote Island Areas, Central Pacific. Almost complete bottom...

CRED 40 m Gridded bathymetry of Baker Island, Pacific Remote Island Areas, Central Pacific (Arc ASCII Format)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Gridded (40 m cell size) bathymetry of the shelf and slope environments of Baker Island, Pacific Remote Island Areas, Central Pacific. Almost complete bottom...

Pacific Rim log trade: determinants and trends.

Science.gov (United States)

Donald F. Flora; Andrea L. Anderson; Wendy J. McGinnls

1991-01-01

Pacific Rim trade in softwood logs amounts to about $3 billion annually, of which the U.S. share is about $2 billion. Log exporting is a significant part of the forest economy in the Pacific Northwest. The 10 major Pacific Rim log-trading client and competitor countries differ widely in their roles in trade and in their policies affecting the industry.

Spatial and temporal variability in the trans-Pacific migration of Pacific bluefin tuna (Thunnus orientalis) revealed by archival tags

Science.gov (United States)

Fujioka, Ko; Fukuda, Hiromu; Tei, Yaoki; Okamoto, Suguru; Kiyofuji, Hidetada; Furukawa, Seishiro; Takagi, Junichi; Estess, Ethan; Farwell, Charles J.; Fuller, Daniel W.; Suzuki, Nobuaki; Ohshimo, Seiji; Kitagawa, Takashi

2018-03-01

Archival electronic tags were internally implanted in 713 age-0 Pacific bluefin tuna (PBF) caught in their nursery waters off the southern coast of Japan and in the East China Sea over an extended study period (1995-2015) to clarify the spatial and temporal variability of their trans-Pacific migration. Two hundred twenty-five of these tagged tuna were recaptured by fisheries (31.6%), and we successfully retrieved tag data from 14 of 21 individuals recovered in the Eastern pacific. Furthermore, one archival tag recovered in the Western Pacific revealed that the individual had performed a trans-Pacific migration, so in total 21 tagged PBF were shown to have migrated to the Eastern Pacific (2.9% of the total tags released). We successfully downloaded data from 15 of these 21 archival tags, which revealed that some age-1 PBF migrate rapidly (123.9 ± 82.8 km day-1) and directly from waters offshore of Japan to the eastern Pacific (160.0°E to 130.0°W), a journey that takes an average of 2.5 months (ranging from 1.2 to 5.5 months) through relatively cool waters (14.7 ± 2.0 °C). All juvenile PBF began their trans-Pacific migration shortly after exposure to cooler water temperatures (physiological challenge for this age class. Three patterns were identified in the timing of the departure of juvenile PBF from the western Pacific: departing 12-14 months post-hatch (N = 7) in early summer (May-July), departing 17-19 months post-hatch (N = 7) in late autumn (October-December), and departing 21 months post-hatch (N = 1) in late winter (February). The PBF tagged along the southern coast of Japan (SCJ) arrived in the eastern Pacific earlier than those tagged in the East China Sea (ECS), most likely due to the shorter travel distance. Additionally, the PBF that began their trans-Pacific migration in the earlier period remained in an offshore foraging zone (the Kuroshio-Oyashio transition region) for shorter periods (2.8 months on average) and at lower latitudes (35.0�

CRED 5 m Gridded bathymetry of Baker Island, Pacific Remote Island Areas, Central Pacific (Arc ASCII Format)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Gridded (5 m cell size) bathymetry of the shelf and slope environments of Baker Island, Pacific Remote Isand Areas, Central Pacific. Almost complete bottom coverage...

The Pacific Rat Race to Easter Island: Tracking the Prehistoric Dispersal of Rattus exulans Using Ancient Mitochondrial Genomes

Directory of Open Access Journals (Sweden)

Katrina West

2017-05-01

Full Text Available The location of the immediate eastern Polynesian origin for the settlement of Easter Island (Rapa Nui, remains unclear with conflicting archeological and linguistic evidence. Previous genetic commensal research using the Pacific rat, Rattus exulans; a species transported by humans across Remote Oceania and throughout the Polynesian Triangle, has identified broad interaction spheres across the region. However, there has been limited success in distinguishing finer-scale movements between Remote Oceanic islands as the same mitochondrial control region haplotype has been identified in the majority of ancient rat specimens. To improve molecular resolution and identify a pattern of prehistoric dispersal to Easter Island, we sequenced complete mitochondrial genomes from ancient Pacific rat specimens obtained from early archeological contexts across West and East Polynesia. Ancient Polynesian rat haplotypes are closely related and reflect the widely supported scenario of a central East Polynesian homeland region from which eastern expansion occurred. An Easter Island and Tubuai (Austral Islands grouping of related haplotypes suggests that both islands were established by the same colonization wave, proposed to have originated in the central homeland region before dispersing through the south-eastern corridor of East Polynesia.

Multi-sensor Oceanographic Correlations for Pacific Hake Acoustic Survey Improvement

Science.gov (United States)

Brozen, M.; Hillyer, N.; Holt, B.; Armstrong, E. M.

2010-12-01

North Pacific hake (Merluccius productus), the most abundant groundfish along the Pacific coast of northwestern America, are an essential source of income for the coastal region from southern California to British Columbia, Canada. However, hake abundance and distribution are highly variable among years, exhibiting variance in both the north-south and east-west distribution as seen in the results from biannual acoustic surveys. This project is part of a larger undertaking, ultimately focused on the prediction of hake distribution to improve the distribution of survey effort and precision of stock assessments in the future. Four remotely sensed oceanographic variables are examined as a first step in improving our understanding the relationship between the intensity of coastal upwelling and other ocean dynamics, and the north-south summer hake distribution. Sea surface height, wind vectors, chlorophyll - a concentrations, and sea surface temperature were acquired from several satellites, including AVHRR, SeaWifs, TOPEX/Poseidon, Jason-1, Jason-2, SSM/I, ASMR-E, and QuikScat. Data were aligned to the same spatial and temporal resolution, and these re-gridded data were then analyzed using empirical orthogonal functions (EOFs). EOFs were used as a spatio-temporally compact representation of the data and to reduce the co-variability of the multiple time series in the dataset. The EOF results were plotted and acoustic survey results were overlaid to understand differences between regions. Although this pilot project used data from only a single year (2007), it demonstrated a methodology for reducing dimensionality of linearly related satellite variables that can used in future applications, and provided insight into multi-dimensional ocean characteristics important for hake distribution.

The pacific island health care project.

Science.gov (United States)

Person, Donald Ames

2014-01-01

US Associated/Affiliated Pacific Islands (USAPI) include three freely associated states: Marshall Islands, Federated States of Micronesia, Palau, and three Territories: American Samoa, Guam, and Commonwealth of the Northern Mariana Islands. The Pacific Island Health Care Project (PIHCP) provides humanitarian medical referral/consultation/care to >500,000 indigenous people of these remote islands. In the mid-1990s, we developed a simple store-and-forward program to link the USAPI with Tripler Army Medical Center. This application allowed image attachment to email consultations. More than 8000 Pacific Islanders have benefited from the program. Three thousand Pacific Islanders prior to telemedicine (1990-1997) and since store-and-forward telemedicine (1997-present), the PIHCP has helped an additional 5000. Records post dynamically and are stored in an archival database. The PIHCP is the longest running telemedicine program in the world delivering humanitarian medical care. It has bridged the Developing World of the remote Pacific Islands with advanced medical and surgical care available at a major US military teaching hospital. (The opinions expressed here are those of the author and not that of the Army, Department of Defense, or the US Government.).

The Pacific Island Health Care Project

Directory of Open Access Journals (Sweden)

Donald Ames Person

2014-10-01

Full Text Available Introduction/BackgroundUS Associated/Affiliated Pacific Islands (USAPI include 3 Freely Associated States: Marshall Islands, Federated States of Micronesia, Palau and 3 Territories: American Samoa, Guam, and Commonwealth of the Northern Mariana Islands. ObjectiveThe Pacific Island Health Care Project (PIHCP provides humanitarian medical referral/consultation/care to >500,000 indigenous people of these remote islands. Methods In the mid-1990s, we developed a simple store-and-forward program to link the USAPI with Tripler Army Medical Center (TAMC. This application allowed image attachment to email consultations. ResultsMore than 8000 Pacific Islanders have benefited from the program. 3000 Pacific Islanders prior to telemedicine (1990-1997 and since store-and-forward telemedicine (1997-present, the PIHCP has helped an additional 5000. Records post dynamically and are stored in an archival database. Conclusion The PIHCP is the longest running telemedicine program in the world delivering humanitarian medical care. It has bridged the Developing World of the remote Pacific islands with advanced medical and surgical care available at a major US military teaching hospital.(The opinions expressed here are those of the author and not that of the Army, Department of Defense, or the US Government.

Exploring the Genomic Traits of Non-toxigenic Vibrio parahaemolyticus Strains Isolated in Southern Chile

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Daniel Castillo

2018-02-01

Full Text Available Vibrio parahaemolyticus is the leading cause of seafood-borne gastroenteritis worldwide. As reported in other countries, after the rise and fall of the pandemic strain in Chile, other post-pandemic strains have been associated with clinical cases, including strains lacking the major toxins TDH and TRH. Since the presence or absence of tdh and trh genes has been used for diagnostic purposes and as a proxy of the virulence of V. parahaemolyticus isolates, the understanding of virulence in V. parahaemolyticus strains lacking toxins is essential to detect these strains present in water and marine products to avoid possible food-borne infection. In this study, we characterized the genome of four environmental and two clinical non-toxigenic strains (tdh-, trh-, and T3SS2-. Using whole-genome sequencing, phylogenetic, and comparative genome analysis, we identified the core and pan-genome of V. parahaemolyticus of strains of southern Chile. The phylogenetic tree based on the core genome showed low genetic diversity but the analysis of the pan-genome revealed that all strains harbored genomic islands carrying diverse virulence and fitness factors or prophage-like elements that encode toxins like Zot and RTX. Interestingly, the three strains carrying Zot-like toxin have a different sequence, although the alignment showed some conserved areas with the zot sequence found in V. cholerae. In addition, we identified an unexpected diversity in the genetic architecture of the T3SS1 gene cluster and the presence of the T3SS2 gene cluster in a non-pandemic environmental strain. Our study sheds light on the diversity of V. parahaemolyticus strains from the southern Pacific which increases our current knowledge regarding the global diversity of this organism.

Arbutus menziesii Pursh. Pacific madrone

Science.gov (United States)

Philip M. McDonald

1990-01-01

Pacific madrone (Arbutus menziesii) is one of the most widely distributed tree species native to the Pacific coast. Named for its discoverer, Archibald Menzies, a 19th century Scottish physician and naturalist, the species is called arbutus in Canada, and madrone, madroña, or madroño in the United States. The latter name is...

Asia-Pacific lube oil markets

International Nuclear Information System (INIS)

Yamaguchi, N.

2001-01-01

An overview of the Asia-Pacific (AP) lubricating oils market, its special characteristics, and its role in the global economy are presented. In the 'boom and bust' years of 1997-1999, the Asia-Pacific market was even bigger then the US market. For the short-term, the scenario is surplus capacity and poor margins, but in the long term there is enormous potential for growth. How fuel demand and quality is related to engine type is discussed. The three basic grades of baseoils are described, and the Asia-Pacific lube demand and the Asia-Pacific lube oil supply are discussed. There are 15 diagrams giving data on: (i) finished lubes in world markets as a percentage of total; (ii) how lube demand follows GDP per capita in Asia; (iii) AP baseoil capacity relationships; (iv) AP baseoil disposition by end use; (v) AP changing shares of baseoil demand; (vi) AP finished lube demand by subregion; (vii) AP finished lube demand growth, indexed; (viii) AP baseoil capacity by region; Singapore baseoil vs. Dubai crude prices, 1992-99; (ix) Singapore baseoil vs. crude prices, 1992-99; (x) AP baseoil deficit moved to surplus; (xi) AP baseoil production; (xii) East Asia net percentage change in lube sales, 1997-1999. (xiii) Southeast Asia net percentage change in lube sales, 1997-1999; (xiv) South East Asia and Australia net percentage change in lube sales, 1997-1999 and (xv) Asia-Pacific major lube marketers

Macro-Scale Patterns in Upwelling/Downwelling Activity at North American West Coast.

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Romeo Saldívar-Lucio

Full Text Available The seasonal and interannual variability of vertical transport (upwelling/downwelling has been relatively well studied, mainly for the California Current System, including low-frequency changes and latitudinal heterogeneity. The aim of this work was to identify potentially predictable patterns in upwelling/downwelling activity along the North American west coast and discuss their plausible mechanisms. To this purpose we applied the min/max Autocorrelation Factor technique and time series analysis. We found that spatial co-variation of seawater vertical movements present three dominant low-frequency signals in the range of 33, 19 and 11 years, resembling periodicities of: atmospheric circulation, nodal moon tides and solar activity. Those periodicities might be related to the variability of vertical transport through their influence on dominant wind patterns, the position/intensity of pressure centers and the strength of atmospheric circulation cells (wind stress. The low-frequency signals identified in upwelling/downwelling are coherent with temporal patterns previously reported at the study region: sea surface temperature along the Pacific coast of North America, catch fluctuations of anchovy Engraulis mordax and sardine Sardinops sagax, the Pacific Decadal Oscillation, changes in abundance and distribution of salmon populations, and variations in the position and intensity of the Aleutian low. Since the vertical transport is an oceanographic process with strong biological relevance, the recognition of their spatio-temporal patterns might allow for some reasonable forecasting capacity, potentially useful for marine resources management of the region.

76 FR 6402 - Pacific Fishery Management Council; Public Meeting

Science.gov (United States)

2011-02-04

... Pacific Fishery Management Council's (Pacific Council) Groundfish Essential Fish Habitat Review Committee... review of Essential Fish Habitat (EFH) descriptions for Pacific Coast groundfish species. Major topics of...

Exploring the 'cultural' in cultural competencies in Pacific mental health.

Science.gov (United States)

Samu, Kathleen Seataoai; Suaalii-Sauni, Tamasailau

2009-02-01

Cultural competency is about the ability of individuals and systems to respond respectfully and effectively to the cultural needs of peoples of all cultures. Its general attributes include knowledge, attitudes, skills and professional judgment. In Pacific mental health, 'the cultural' is generally understood to be ethnic culture. Accordingly, Pacific cultural competencies assume ethnic specific markers. In mental health Pacific cultural competencies has seen a blending of cultural and clinical beliefs and practices. This paper provides an overview of five key theme areas arising from Auckland-based ethnic-specific Pacific workshop data: language, family, tapu relationships, skills and organisation policy. Workshop participants comprised of Pacific mental health providers, Pacific consumers, family members of Pacific consumers and members of the Pacific community members. This paper purports that identifying the perceptions of different Pacific groups on ethnic-specific elements of cultural competencies are necessary to build and strengthen the capacity and capability of mental health services to provide culturally relevant services.

A comparison of GPS strain rate and seismicity in mainland China

Science.gov (United States)

Ye, J.; Liu, M.

2011-12-01

The spatial distribution and moment release of earthquakes should correlate to crustal strain rates, assuming most of the crustal strain is released by earthquakes. However, the correlation between seismicity and crustal strain rates is not always clear, especially in continental interiors where large earthquakes are infrequent and earthquake records often incomplete. Here we compare seismicity and crustal strain rates in mainland China, where in the past decades the GPS measurements by the Crustal Motion Observation Network of China and other teams have determined the velocity at more than a thousand sites, allowing a meaningful calculation of the spatial distribution of the crustal strain rates. Our strain-rate map of mainland China is consistent with tectonic activities. The average scalar strain rate in West China is 17.5x10-16, contrasting to the much lower value (2.5x 10-16) in East China. The high strain rates are mainly found in the Tibetan Plateau, with the highest values clearly delineating the major active faults, including the Himalayan main boundary thrust, the Xianshuihe fault, the Longmanshan fault, the Haiyuan fault, and the southern Tianshan boundary fault. North China also has relatively high strain rates, but the high strain rates around the cities of Tangshan and Xingtai likely result from postseismic deformation following the 1966 Xingtai earthquake (M 7.2) and the 1976 Tangshan earthquake (M 7.8). We calculated the seismic moment release using the Chinese earthquake catalog that goes back to more than 2000 years. The spatial pattern of cumulative seismic moment release is generally comparable with that of the strain rates. Regions of major discrepancies include the Weihe-Shanxi grabens, which had numerous large earthquakes but have been quiescent in the past 300 years. When we use smaller time windows (200 or 500 years) to calculate the seismic moment release, we found strongly variable spatial patterns that is generally incomparable with the

Evaluation of indigenous rhizobacterial strains with reduced dose of chemical fertilizer towards growth and yield of mustard (Brassica campestris under old alluvial soil zone of West Bengal, India

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Shampa Dutta

2017-12-01

Full Text Available A field experiment had been carried out in the Crop Research and Seed Multiplication Farm of The University of Burdwan, West Bengal, India during the two consecutive winter seasons of 2011-2012 and 2012-2013 to study the effect of indigenous rhizospheric bacterial strains on growth, physiology and yield of mustard variety. Pseudomonas putida, Burkholderia cepacia, Burkholderia sp. and their mixture were used as seed inoculants for mustard cultivation. The experiment was laid down in a randomized complete block design (RCBD with three replications. Results revealed that indigenous inoculation (with reduced dose of chemical fertilizer significantly increased (p < 0.05 the yield of mustard as compared to uninoculated control (full recommended dose of NPK fertilizers. A combination treatment of biofertilizer and chemical fertilizer also increased plant height, plant biomass and other yield components compared to control. The comprehensive approach of plant growth promoting rhizobacteria (PGPR in agriculturally important crops should be carried out to explore the hidden potential of PGPR and to promote the quality and yield of crop under field conditions. Keywords: Indigenous rhizobacteria, Mustard, PGPR, Yield

Deep genetic divergences among Indo-Pacific populations of the coral reef sponge Leucetta chagosensis (Leucettidae): founder effects, vicariance, or both?

Science.gov (United States)

Wörheide, Gert; Epp, Laura S; Macis, Luciana

2008-01-26

An increasing number of studies demonstrate that genetic differentiation and speciation in the sea occur over much smaller spatial scales than previously appreciated given the wide distribution range of many morphologically defined coral reef invertebrate species and the presumed dispersal-enhancing qualities of ocean currents. However, knowledge about the processes that lead to population divergence and speciation is often lacking despite being essential for the understanding, conservation, and management of marine biodiversity. Sponges, a highly diverse, ecologically and economically important reef-invertebrate taxon, exhibit spatial trends in the Indo-West Pacific that are not universally reflected in other marine phyla. So far, however, processes generating those unexpected patterns are not understood. We unraveled the phylogeographic structure of the widespread Indo-Pacific coral reef sponge Leucetta chagosensis across its known geographic range using two nuclear markers: the rDNA internal transcribed spacers (ITS 1&2) and a fragment of the 28S gene, as well as the second intron of the ATP synthetase beta subunit-gene (ATPSb-iII). This enabled the detection of several deeply divergent clades congruent over both loci, one containing specimens from the Indian Ocean (Red Sea and Maldives), another one from the Philippines, and two other large and substructured NW Pacific and SW Pacific clades with an area of overlap in the Great Barrier Reef/Coral Sea. Reciprocally monophyletic populations were observed from the Philippines, Red Sea, Maldives, Japan, Samoa, and Polynesia, demonstrating long-standing isolation. Populations along the South Equatorial Current in the south-western Pacific showed isolation-by-distance effects. Overall, the results pointed towards stepping-stone dispersal with some putative long-distance exchange, consistent with expectations from low dispersal capabilities. We argue that both founder and vicariance events during the late Pliocene and

Proceedings of the session on tropical forestry for people of the Pacific, XVII Pacific Science Congress; May 27-28, 1991

Science.gov (United States)

Eugene C. Conrad; Leonard A. Newell

1992-01-01

The 17 papers in the Proceedings of the Session on Tropical Forestry for People of the Pacific cover the topics of the USDA Forest Service's tropical forestry research, forestry research in Asia and the Pacific, management of tropical forests for products and energy; forest and wildlife management, the South Pacific Forestry Development Programme, tropical...

1993 Pacific Northwest Loads and Resources Study.

Energy Technology Data Exchange (ETDEWEB)

United States. Bonneville Power Administration.

1993-12-01

The Loads and Resources Study is presented in three documents: (1) this summary of Federal system and Pacific Northwest region loads and resources; (2) a technical appendix detailing forecasted Pacific Northwest economic trends and loads, and (3) a technical appendix detailing the loads and resources for each major Pacific Northwest generating utility. In this loads and resources study, resource availability is compared with a range of forecasted electricity consumption. The forecasted future electricity demands -- firm loads -- are subtracted from the projected capability of existing and {open_quotes}contracted for{close_quotes} resources to determine whether Bonneville Power Administration (BPA) and the region will be surplus or deficit. If resources are greater than loads in any particular year or month, there is a surplus of energy and/or capacity, which BPA can sell to increase revenues. Conversely, if firm loads exceed available resources, there is a deficit of energy and/or capacity, and additional conservation, contract purchases, or generating resources will be needed to meet load growth. The Pacific Northwest Loads and Resources Study analyzes the Pacific Northwest`s projected loads and available generating resources in two parts: (1) the loads and resources of the Federal system, for which BPA is the marketing agency; and (2) the larger Pacific Northwest regional power system, which includes loads and resource in addition to the Federal system. The loads and resources analysis in this study simulates the operation of the power system under the Pacific Northwest Coordination Agreement (PNCA) produced by the Pacific Northwest Coordinating Group. This study presents the Federal system and regional analyses for five load forecasts: high, medium-high, medium, medium-low, and low. This analysis projects the yearly average energy consumption and resource availability for Operating Years (OY) 1994--95 through 2003--04.

Distinct repeat motifs at the C-terminal region of CagA of Helicobacter pylori strains isolated from diseased patients and asymptomatic individuals in West Bengal, India

Directory of Open Access Journals (Sweden)

Chattopadhyay Santanu

2012-05-01

Full Text Available Abstract Background Infection with Helicobacter pylori strains that express CagA is associated with gastritis, peptic ulcer disease, and gastric adenocarcinoma. The biological function of CagA depends on tyrosine phosphorylation by a cellular kinase. The phosphate acceptor tyrosine moiety is present within the EPIYA motif at the C-terminal region of the protein. This region is highly polymorphic due to variations in the number of EPIYA motifs and the polymorphism found in spacer regions among EPIYA motifs. The aim of this study was to analyze the polymorphism at the C-terminal end of CagA and to evaluate its association with the clinical status of the host in West Bengal, India. Results Seventy-seven H. pylori strains isolated from patients with various clinical statuses were used to characterize the C-ternimal polymorphic region of CagA. Our analysis showed that there is no correlation between the previously described CagA types and various disease outcomes in Indian context. Further analyses of different CagA structures revealed that the repeat units in the spacer sequences within the EPIYA motifs are actually more discrete than the previously proposed models of CagA variants. Conclusion Our analyses suggest that EPIYA motifs as well as the spacer sequence units are present as distinct insertions and deletions, which possibly have arisen from extensive recombination events. Moreover, we have identified several new CagA types, which could not be typed by the existing systems and therefore, we have proposed a new typing system. We hypothesize that a cagA gene encoding higher number EPIYA motifs may perhaps have arisen from cagA genes that encode lesser EPIYA motifs by acquisition of DNA segments through recombination events.

South Pacific Nuclear Free Zone Treaty

International Nuclear Information System (INIS)

1987-03-01

The document contains the 3 Protocols to the South Pacific Nuclear Free Zone Treaty (INFCIRC-331) adopted by the South Pacific Forum at its 17th session in Suva on 8 August 1986. The treaty entered into force on 11 December 1986

Pacific-North American teleconnection and North Pacific Oscillation: historical simulation and future projection in CMIP5 models

Science.gov (United States)

Chen, Zheng; Gan, Bolan; Wu, Lixin; Jia, Fan

2017-09-01

Based on reanalysis datasets and as many as 35 CMIP5 models, this study evaluates the capability of climate models to simulate the spatiotemporal features of Pacific-North American teleconnection (PNA) and North Pacific Oscillation (NPO) in the twentieth century wintertime, and further investigates their responses to greenhouse warming in the twenty-first century. Analysis reveals that while the majority (80%) of models reasonably simulate either the geographical distribution or the amplitude of PNA/NPO pattern, only half of models can well capture both features in space. As for the temporal features, variabilities of PNA and NPO in most models are biased toward higher amplitude. Additionally, most models simulate the interannual variabilities of PNA and NPO, qualitatively consistent with the observation, whereas models generally lack the capability to reproduce the decadal (20-25 years) variability of PNA. As the climate warms under the strongest future warming scenario, the PNA intensity is found to be strengthened, whereas there is no consensus on the direction of change in the NPO intensity among models. The intensification of positive PNA is primarily manifested in the large deepening of the North Pacific trough, which is robust as it is 2.3 times the unforced internal variability. By focusing on the tropical Pacific Ocean, we find that the multidecadal evolution of the North Pacific trough intensity (dominating the PNA intensity evolution) is closely related to that of the analogous trough in the PNA-like teleconnection forced by sea surface temperature anomalies (SSTa) in the tropical central Pacific (CP) rather than the tropical eastern Pacific (EP). Such association is also found to act under greenhouse warming: that is, the strengthening of the PNA-like teleconnection induced by the CP SSTa rather than the EP SSTa is a driving force for the intensification of PNA. This is in part owing to the robust enhancement of the tropical precipitation response to

Pacific-North American teleconnection and North Pacific Oscillation: historical simulation and future projection in CMIP5 models

Science.gov (United States)

Chen, Zheng; Gan, Bolan; Wu, Lixin; Jia, Fan

2018-06-01

Based on reanalysis datasets and as many as 35 CMIP5 models, this study evaluates the capability of climate models to simulate the spatiotemporal features of Pacific-North American teleconnection (PNA) and North Pacific Oscillation (NPO) in the twentieth century wintertime, and further investigates their responses to greenhouse warming in the twenty-first century. Analysis reveals that while the majority (80%) of models reasonably simulate either the geographical distribution or the amplitude of PNA/NPO pattern, only half of models can well capture both features in space. As for the temporal features, variabilities of PNA and NPO in most models are biased toward higher amplitude. Additionally, most models simulate the interannual variabilities of PNA and NPO, qualitatively consistent with the observation, whereas models generally lack the capability to reproduce the decadal (20-25 years) variability of PNA. As the climate warms under the strongest future warming scenario, the PNA intensity is found to be strengthened, whereas there is no consensus on the direction of change in the NPO intensity among models. The intensification of positive PNA is primarily manifested in the large deepening of the North Pacific trough, which is robust as it is 2.3 times the unforced internal variability. By focusing on the tropical Pacific Ocean, we find that the multidecadal evolution of the North Pacific trough intensity (dominating the PNA intensity evolution) is closely related to that of the analogous trough in the PNA-like teleconnection forced by sea surface temperature anomalies (SSTa) in the tropical central Pacific (CP) rather than the tropical eastern Pacific (EP). Such association is also found to act under greenhouse warming: that is, the strengthening of the PNA-like teleconnection induced by the CP SSTa rather than the EP SSTa is a driving force for the intensification of PNA. This is in part owing to the robust enhancement of the tropical precipitation response to

Sponges from Clipperton Island, East Pacific

NARCIS (Netherlands)

van Soest, R.W.M.; Kaiser, K.L.; van Syoc, R.

2011-01-01

Twenty sponge species (totalling 190 individuals) were collected during the 1938, 1994 and 2004/5 expeditions to the remote island of Clipperton in the East Pacific Ocean. Seven species are widespread Indo-Pacific sponges; nine species comprise sponges new to science; four species were represented

The History of the Pacific Superplume

Science.gov (United States)

Suzuki, N.; Utsunomiya, A.; Maruyama, S.

2001-12-01

To understand the birth place and episodic activity of the Pacific superplume, we reconstructed the paleogeograhy of continents and oceanic plates from 1.0 Ga supercontinent Rodinia until now by adopting the most confident available data set to determine paleopositions of oceanic plateaus, seamounts, and oceanic arc, in addition to major continents, by using plate trajectory for the last 150Ma and for the farther back to 1.0Ga, by the paleomagnetic constraints tied with geologic connections. Our main focus is the frequency change of ancient activity of plume rocks that are now preserved in the accretionary complex around the circum-Pacific orogenic belts. Several conclusions are led through our reconstruction. (1) Cretaceous oceanic plateaus which present widespread in western Pacific (e.g., Manihiki Plateau, Shatsky Rise, Hess Rise, Mid-Pacific Mountain, Nauru Basin) are traced back and concentrated to the present active region of the Pacific superplume. This suggests that those were once formed a huge composite volcanoes as large as 4000 km x 2400 km across during the Cretaceous by superplume activity. These are equivalent to Australia or Tharsis bulge volcanic complex on Mars. The estimated thickness of oceanic crust ca. 30-40 km suggests that major parts may have been above sea-level during the Cretaceous time. The Cretaceous global warming may be related to this hyper-active superplume event which have carried mantle CO2 to the surface of 3.2 x 1021 g, assuming 0.3 wt% x 350 million km3 (magma volume) x 3.07 g/cm3 during 150-75 Ma. This CO2 output amount occupies as much as 37 wt% among the total output from mantle estimated by using erupted basaltic volume estimated by Larson (1991, Geology, 549-550) and present output rate of CO2. The similar episodic activity of Pacific superplume seems to have occurred at 750-700 Ma, 550-500Ma, 300-250Ma by considering the frequency of occurrences of greenstones in the accretionary complexes of the world. (2) Rodinia

Autumn Cooling of Western East Antarctica Linked to the Tropical Pacific

Science.gov (United States)

Clem, Kyle R.; Renwick, James A.; McGregor, James

2018-01-01

Over the past 60 years, the climate of East Antarctica cooled while portions of West Antarctica were among the most rapidly warming regions on the planet. The East Antarctic cooling is attributed to a positive trend in the Southern Annular Mode (SAM) and a strengthening of the westerlies, while West Antarctic warming is tied to zonally asymmetric circulation changes forced by the tropics. This study finds recent (post-1979) surface cooling of East Antarctica during austral autumn to also be tied to tropical forcing, namely, an increase in La Niña events. The recent increase in La Niña conditions forces a Rossby wave into the Southern Hemisphere that increases anticyclonic circulation over the South Atlantic. The South Atlantic anticyclone is associated with cold air advection, weakened northerlies, and increased sea ice concentrations across the western East Antarctic coast, which has increased the rate of cooling at Novolazarevskaya and Syowa stations after 1979. This enhanced cooling over western East Antarctica is tied more broadly to a zonally asymmetric temperature trend pattern across East Antarctica during autumn that is consistent with a tropically forced Rossby wave rather than a SAM pattern; the positive SAM pattern is associated with ubiquitous cooling across East Antarctica, which is not seen in temperature observations after 1979. We conclude that El Niño-Southern Oscillation-related circulation anomalies, particularly zonal asymmetries that locally enhance meridional wind, are an important component of East Antarctic climate variability during autumn, and future changes in tropical Pacific climate will likely have implications for East Antarctica.

Wave energy: a Pacific perspective.

Science.gov (United States)

Paasch, Robert; Ruehl, Kelley; Hovland, Justin; Meicke, Stephen

2012-01-28

This paper illustrates the status of wave energy development in Pacific rim countries by characterizing the available resource and introducing the region's current and potential future leaders in wave energy converter development. It also describes the existing licensing and permitting process as well as potential environmental concerns. Capabilities of Pacific Ocean testing facilities are described in addition to the region's vision of the future of wave energy.

78 FR 25955 - Pacific Fishery Management Council; Public Meeting

Science.gov (United States)

2013-05-03

... Pacific Fishery Management Council's (Pacific Council) Highly Migratory Species Management Team (HMSMT... Fishery Management Council; Public Meeting AGENCY: National Marine Fisheries Service (NMFS), National... be implemented pursuant to the precautionary management framework for North Pacific albacore...

78 FR 27367 - Pacific Fishery Management Council; Public Meeting

Science.gov (United States)

2013-05-10

... Pacific Fishery Management Council's (Pacific Council) Highly Migratory Species Management Team (HMSMT... Fishery Management Council; Public Meeting AGENCY: National Marine Fisheries Service (NMFS), National... be implemented pursuant to the precautionary management framework for North Pacific albacore...

Diabetic dyslipidaemia in Asian populations in the Western Pacific Region: what we know and don't know.

Science.gov (United States)

Chan, Juliana C N; Chan, Siew Pheng; Deerochanawong, Chaicharn; Go, Ruby T; Lee, Kok-Onn; Ma, Ronald Ching-Wan; Pan, Chang-Yu; Sheu, Wayne H-H; Barter, Philip

2011-10-01

Approximately 77 million persons with diabetes reside in the Western Pacific Region. This number is estimated to rise to 113 million in 2030 with increasing burden of cardio-renal disease, affecting an increasingly young population. Randomized clinical trials have confirmed the benefits of using statins to reduce low-density lipoprotein cholesterol in preventing cardiovascular disease (CVD) in Caucasians, although similar data are lacking in Asia. Experts from the Western Pacific Region met and reviewed evidence regarding risk association of diabetic dyslipidaemia with cardio-renal disease, effects of lipid lowering, recommended guidelines and clinical practices in Asian populations. There is strong evidence supporting the role of diabetic dyslipidaemia in cardio-renal disease and the benefits of lipid lowering in these populations. The high rate of diabetic kidney disease, its close links with CVD, and the benefits of lipid lowering on renal function are particularly relevant to this population. While most national guidelines use criteria similar to the West in management of diabetic dyslipidaemia, there are consistently low rates of use of lipid-lowering drugs and attaining treatment goals in the region. The group recommends conducting randomized studies, strengthening of the health care system to promote early detection, and intervention of diabetic dyslipidaemia to prevent end organ damage. Copyright © 2011 Elsevier Ireland Ltd. All rights reserved.

Whole Genome Sequencing of Mycobacterium africanum Strains from Mali Provides Insights into the Mechanisms of Geographic Restriction.

Science.gov (United States)

Winglee, Kathryn; Manson McGuire, Abigail; Maiga, Mamoudou; Abeel, Thomas; Shea, Terrance; Desjardins, Christopher A; Diarra, Bassirou; Baya, Bocar; Sanogo, Moumine; Diallo, Souleymane; Earl, Ashlee M; Bishai, William R

2016-01-01

Mycobacterium africanum, made up of lineages 5 and 6 within the Mycobacterium tuberculosis complex (MTC), causes up to half of all tuberculosis cases in West Africa, but is rarely found outside of this region. The reasons for this geographical restriction remain unknown. Possible reasons include a geographically restricted animal reservoir, a unique preference for hosts of West African ethnicity, and an inability to compete with other lineages outside of West Africa. These latter two hypotheses could be caused by loss of fitness or altered interactions with the host immune system. We sequenced 92 MTC clinical isolates from Mali, including two lineage 5 and 24 lineage 6 strains. Our genome sequencing assembly, alignment, phylogeny and average nucleotide identity analyses enabled us to identify features that typify lineages 5 and 6 and made clear that these lineages do not constitute a distinct species within the MTC. We found that in Mali, lineage 6 and lineage 4 strains have similar levels of diversity and evolve drug resistance through similar mechanisms. In the process, we identified a putative novel streptomycin resistance mutation. In addition, we found evidence of person-to-person transmission of lineage 6 isolates and showed that lineage 6 is not enriched for mutations in virulence-associated genes. This is the largest collection of lineage 5 and 6 whole genome sequences to date, and our assembly and alignment data provide valuable insights into what distinguishes these lineages from other MTC lineages. Lineages 5 and 6 do not appear to be geographically restricted due to an inability to transmit between West African hosts or to an elevated number of mutations in virulence-associated genes. However, lineage-specific mutations, such as mutations in cell wall structure, secretion systems and cofactor biosynthesis, provide alternative mechanisms that may lead to host specificity.

Mesozooplankton structure and functioning in the western tropical South Pacific along the 20° parallel south during the OUTPACE survey (February-April 2015)

Science.gov (United States)

Carlotti, François; Pagano, Marc; Guilloux, Loïc; Donoso, Katty; Valdés, Valentina; Hunt, Brian P. V.

2018-03-01

This paper presents results on the spatial and temporal distribution patterns of mesozooplankton in the western tropical South Pacific along the 20 °S south visited during austral summer (February-April 2015). By contributing to the interdisciplinary OUTPACE (Oligotrophy to UlTra-oligotrophy PACific Experiment) project (Moutin et al., 2017), the specific aims of this study dedicated to mesozooplankton observations were (1) to document the responses of zooplankton in terms of species diversity, density and biomass along the transect, and (2) to characterize the trophic pathways from primary production to large mesozooplanktonic organisms. Along a West-East transect of 4000 km from New Caledonia to the French Polynesia, 15 short-duration stations (SD-1 to SD-15, 8 hours each) dedicated to a large-scale description, and three long-duration stations (LD-A to LD-C, 5days each), respectively positioned (1) in offshore northern waters of New Caledonia, (2) near Niue Island, and (3) in the subtropical Pacific gyre near the Cook Islands, were sampled with a Bongo Net with 120 μm mesh size net for quantifying mesozooplankton abundance, biomass, community taxonomy and size structure, and size fractionated content of δ15N. Subsequently, the contribution of Diazotroph Derived Nitrogen (DDN (%) to zooplankton δ15N (ZDDN) values at each station was calculated, as well as an estimation of zooplankton carbon demand and grazing impact and of zooplankton excretion rates. The mesozooplankton community showed a general decreasing trend in abundance and biomass from West to East, with a clear drop in the ultra-oligotrophic waters of the subtropical Pacific gyre (LD-C, SD-14 and SD-15). Higher abundance and biomass corresponded to higher primary production of more or less ephemeral blooms linked to complex mesoscale circulation in the Coral Sea and between the longitudes 170-180 °W. Copepods were the most abundant group (68 to 86 % of total abundance), slightly

Researching Pacific island livelihoods:

DEFF Research Database (Denmark)

Egelund Christensen, Andreas; Mertz, Ole

2010-01-01

on contemporary theories of nissology and conceptual analytical frameworks for island research. Through a review of selected case-study-based island literature on changing livelihoods coming out of the South Pacific, we wish to illustrate and discuss advantages of finding common grounds for small island studies....... The focus is on two dimensions of island livelihood, migration and natural resource management, both of which are significant contributors in making island livelihoods and shaping Pacific seascapes. We argue that there is still a substantial lack of studies targeting small island dynamics that are empirical...

76 FR 55363 - Pacific Fishery Management Council; Public Meeting

Science.gov (United States)

2011-09-07

... Pacific Fishery Management Council's (Pacific Council) Groundfish Management Team (GMT) [[Page 55364... Fishery Management Council; Public Meeting AGENCY: National Marine Fisheries Service (NMFS), National...; telephone: (206) 526-6150. Council address: Pacific Fishery Management Council, 7700 NE Ambassador Place...

77 FR 75614 - Pacific Fishery Management Council; Public Meeting

Science.gov (United States)

2012-12-21

... Pacific Fishery Management Council's (Pacific Council) Highly Migratory Species Management Team (HMSMT... Fishery Management Council; Public Meeting AGENCY: National Marine Fisheries Service (NMFS), National.... Council address: Pacific Fishery Management Council, 7700 NE. Ambassador Place, Suite 101, Portland, OR...

Analysis of policy implications and challenges of the Cuban health assistance program related to human resources for health in the Pacific

Directory of Open Access Journals (Sweden)

Asante Augustine D

2012-05-01

return from Cuba, some PICs may face substantial rises in salary expenditure which could significantly strain already stretched government budgets. Finally, the Cuban engagement in the Pacific has implications for the wider geo-political and health sector support environment as the relatively few major bilateral donors, notably Australia (through AusAID and New Zealand (through NZAID, and multilaterals such as the World Bank will need to accommodate an additional player with whom existing links are limited.

75 FR 49890 - Pacific Fishery Management Council; Public Meeting

Science.gov (United States)

2010-08-16

... Pacific Fishery Management Council's (Pacific Council) Coastal Pelagic Species Management Team (CPSMT) and... Fishery Management Council; Public Meeting AGENCY: National Marine Fisheries Service (NMFS), National... will be available at the following location: Pacific Fishery Management Council, Small Conference Room...

Large Human Outbreak of West Nile Virus Infection in North-Eastern Italy in 2012

Directory of Open Access Journals (Sweden)

Luisa Barzon

2013-11-01

Full Text Available Human cases of West Nile virus (WNV disease have been reported in Italy since 2008. So far, most cases have been identified in north-eastern Italy, where, in 2012, the largest outbreak of WNV infection ever recorded in Italy occurred. Most cases of the 2012 outbreak were identified in the Veneto region, where a special surveillance plan for West Nile fever was in place. In this outbreak, 25 cases of West Nile neuroinvasive disease and 17 cases of fever were confirmed. In addition, 14 WNV RNA-positive blood donors were identified by screening of blood and organ donations and two cases of asymptomatic infection were diagnosed by active surveillance of subjects at risk of WNV exposure. Two cases of death due to WNND were reported. Molecular testing demonstrated the presence of WNV lineage 1 in all WNV RNA-positive patients and, in 15 cases, infection by the novel Livenza strain was ascertained. Surveillance in other Italian regions notified one case of neuroinvasive disease in the south of Italy and two cases in Sardinia. Integrated surveillance for WNV infection remains a public health priority in Italy and vector control activities have been strengthened in areas of WNV circulation.

Acculturation of Pacific mothers in New Zealand over time: findings from the Pacific Islands Families study

Directory of Open Access Journals (Sweden)

Schluter Philip J

2011-05-01

Full Text Available Abstract Background The epidemiological investigation of acculturation has often been hampered by inconsistent definitions and measurement, and methodological short-comings. Adopting a bi-directional model, with good theoretical and psychometric properties, this study aimed to describe the temporal, ethnic and socio-demographic influences of acculturation for a group of Pacific mothers residing in New Zealand. Methods Pacific mothers of a cohort of Pacific infants born at a large tertiary hospital in South Auckland in 2000 were interviewed at 6-weeks, 4-years and 6-years postpartum. At each measurement wave a home interview lasting approximately 90 minutes was conducted with each mother. Adapting the General Ethnicity Questionnaire, two scales of acculturation were elicited: one measuring New Zealand cultural orientation (NZAccult and one measuring Pacific Islands cultural orientation (PIAccult. Acculturation scores were standardised and analysed using random intercept polynomial and piecewise mixed-effects regression models, accounting for the longitudinal nature of the repeated measured data. Mothers who immigrated to New Zealand and those who lived their lives in New Zealand were investigated separately. Results Overall, 1276 Pacific mothers provided 3104 NZAccult and 3107 PIAccult responses over the three measurement waves. Important and significant differences were observed in both bi-directional acculturation measures between the two maternal groups studied. New Zealand cultural orientation increased, on average, linearly with years lived in New Zealand both for immigrant mothers (0.013 per year, 95% CI: 0.012, 0.014, after adjusting for maternal age, and for mothers who lived their lives in New Zealand (0.008 per year, 95% CI: 0.06, 0.010. Immigrant mothers maintained their Pacific cultural orientation for, on average, 12 years before it began to linearly decrease with each year lived in New Zealand thereafter (-0.009 per year, 95% CI: -0

Acculturation of Pacific mothers in New Zealand over time: findings from the Pacific Islands Families study

Science.gov (United States)

2011-01-01

Background The epidemiological investigation of acculturation has often been hampered by inconsistent definitions and measurement, and methodological short-comings. Adopting a bi-directional model, with good theoretical and psychometric properties, this study aimed to describe the temporal, ethnic and socio-demographic influences of acculturation for a group of Pacific mothers residing in New Zealand. Methods Pacific mothers of a cohort of Pacific infants born at a large tertiary hospital in South Auckland in 2000 were interviewed at 6-weeks, 4-years and 6-years postpartum. At each measurement wave a home interview lasting approximately 90 minutes was conducted with each mother. Adapting the General Ethnicity Questionnaire, two scales of acculturation were elicited: one measuring New Zealand cultural orientation (NZAccult) and one measuring Pacific Islands cultural orientation (PIAccult). Acculturation scores were standardised and analysed using random intercept polynomial and piecewise mixed-effects regression models, accounting for the longitudinal nature of the repeated measured data. Mothers who immigrated to New Zealand and those who lived their lives in New Zealand were investigated separately. Results Overall, 1276 Pacific mothers provided 3104 NZAccult and 3107 PIAccult responses over the three measurement waves. Important and significant differences were observed in both bi-directional acculturation measures between the two maternal groups studied. New Zealand cultural orientation increased, on average, linearly with years lived in New Zealand both for immigrant mothers (0.013 per year, 95% CI: 0.012, 0.014), after adjusting for maternal age, and for mothers who lived their lives in New Zealand (0.008 per year, 95% CI: 0.06, 0.010). Immigrant mothers maintained their Pacific cultural orientation for, on average, 12 years before it began to linearly decrease with each year lived in New Zealand thereafter (-0.009 per year, 95% CI: -0.010, -0.008), after

[Molecular-biologic analysis of avian influenza virus isolates which caused epizootics on the south of West Siberia and in Crimea].

Science.gov (United States)

Onishchenko, G G; Berezhnov, S P; Shestopalov, A M; Alekseev, A Iu; Ternovoĭ, V A; Khaĭtovich, A B; Kroviakova, M T; Netesov, S V; Drozdov, I G

2007-01-01

The objective of the study was to determine reasons of poultry deaths in Crimea Republic in December 2005 as well as isolation, identification, and comparative analysis of pathogens, which caused epizootics in Siberia and Crimea. During epizootic in poultry in North-East Crimea highly pathogenic avian influenza virus H5N1 was isolated. Phylogenetic analysis of RNA sequences revealed that they belong to one big cluster. Isolated strain was close to viruses, which caused epizootic in July-August 2005 in the south of West Siberia. Conclusion about the high importance of the south of West Siberia in spreading of highly pathogenic influenza viruses H5N1 in Eurasia was made.

The IAEA '97 Pacific Ocean expedition

International Nuclear Information System (INIS)

Povinec, P.P.; Huynh-Ngoc, L.; Liong Wee Kwong, L.

1999-01-01