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Sample records for tunicate trididemnum solidum

  1. Redescription of Corallobothrium solidum (Cestoda: Proteocephalidea) and erection of a new genus, Essexiella, for tapeworms from channel catfishes (Ictaluridae).

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    Scholz, Tomáš; de Chambrier, Alain; Mariaux, Jean; Kuchta, Roman

    2011-12-01

    The proteocephalidean tapeworm, Corallobothrium solidum, type species of the genus, is redescribed on the basis of the examination of its type specimens and extensive material recently collected from Malapterurus electricus (type host). Some morphological characteristics of taxonomic importance are reported for the first time, such as the presence of semispherical (U-shaped) sphincters on the external (outer) margin of the suckers, a vaginal sphincter, a well-developed seminal receptacle, and a unique morphology of the eggs. Corallobothrium solidum differs from the 2 remaining species of the genus, both parasitic in channel catfishes (Ictaluridae), in its scolex shape, morphology of its suckers, presence of longitudinal and transverse grooves on the body surface, dense network of excretory canals in the apical part of the scolex, morphology of the eggs, and uterine development. The non-monophyletic nature of Corallobothrium is further supported by molecular data (partial sequences of the 28S rRNA gene) because C. solidum and the 2 remaining species from ictalurids do not form a monophyletic assemblage. Therefore, Essexiella n. gen. is proposed to accommodate Essexiella fimbriatum new comb. (type and only species; syn. Corallobothrium fimbriatum) from channel catfish. Essexiella n. gen. differs from Corallobothrium, Megathylacoides, and Megathylacus by the absence of a sphincter in the suckers, from Corallotaenia by the shape of the scolex and the number and shape of proglottids, and from Paraproteocephalus by the structure of the uterus. The diagnosis of Corallobothrium, which becomes monotypic and restricted to electric catfishes in Africa, is emended. The remaining species of Corallobothrium, Corallobothrium parafimbriatum, is tentatively transferred to Corallotaenia as Corallotaenia parafimbriata n. comb., based on molecular data, small size of the strobila, and shape of the scolex.

  2. Immunity in Protochordates: The Tunicate Perspective

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    Nicola Franchi

    2017-06-01

    Full Text Available Tunicates are the closest relatives of vertebrates, and their peculiar phylogenetic position explains the increasing interest toward tunicate immunobiology. They are filter-feeding organisms, and this greatly influences their defense strategies. The majority of the studies on tunicate immunity were carried out in ascidians. The tunic acts as a first barrier against pathogens and parasites. In addition, the oral siphon and the pharynx represent two major, highly vascularized, immune organs, where circulating hemocytes can sense non-self material and trigger immune responses that, usually, lead to inflammation and phagocytosis. Inflammation involves the recruitment of circulating cytotoxic, phenoloxidase (PO-containing cells in the infected area, where they degranulate as a consequence of non-self recognition and release cytokines, complement factors, and the enzyme PO. The latter, acting on polyphenol substrata, produces cytotoxic quinones, which polymerize to melanin, and reactive oxygen species, which induce oxidative stress. Both the alternative and the lectin pathways of complement activation converge to activate C3: C3a and C3b are involved in the recruitment of hemocytes and in the opsonization of foreign materials, respectively. The interaction of circulating professional phagocytes with potentially pathogenic foreign material can be direct or mediated by opsonins, either complement dependent or complement independent. Together with cytotoxic cells, phagocytes are active in the encapsulation of large materials. Cells involved in immune responses, collectively called immunocytes, represent a large fraction of hemocytes, and the presence of a cross talk between cytotoxic cells and phagocytes, mediated by secreted humoral factors, was reported. Lectins play a pivotal role as pattern-recognition receptors and opsonizing agents. In addition, variable region-containing chitin-binding proteins, identified in the solitary ascidian Ciona

  3. Measurement of refractive indices of tunicates' tunics: light reflection of the transparent integuments in an ascidian Rhopalaea sp. and a salp Thetys vagina.

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    Kakiuchida, Hiroshi; Sakai, Daisuke; Nishikawa, Jun; Hirose, Euichi

    2017-01-01

    Tunic is a cellulosic, integumentary matrix found in tunicates (Subphylum Tunicata or Urochordata). The tunics of some ascidian species and pelagic tunicates, such as salps, are nearly transparent, which is useful in predator avoidance. Transparent materials can be detected visually using light reflected from their surfaces, with the different refractive indices between two media, i.e., tunic and seawater, being the measure of reflectance. A larger difference in refractive indices thus provides a larger measure of reflectance. We measured the refractive indices of the transparent tunic of Thetys vagina (salp: Thaliacea) and Rhopalae a sp. (ascidian: Ascidiacea) using an Abbe refractometer and an ellipsometer to estimate the light reflection at the tunic surface and evaluate the anti-reflection effect of the nipple array structure on the tunic surface of T. vagina . At D-line light (λ = 589 nm), the refractive indices of the tunics were 0.002-0.004 greater than seawater in the measurements by Abbe refractometer, and 0.02-0.03 greater than seawater in the measurements by ellipsometer. The refractive indices of tunics were slightly higher than that of seawater. According to the simulation of light reflection based on rigorous coupled wave analysis (RCWA), light at a large angle of incidence will be completely reflected from a surface when its refractive indices are smaller than seawater. Therefore, the refractive index of integument is important for enabling transparent organisms to remain invisible in the water column. In order to minimize reflectance, the refractive index should be similar to, but never smaller than, that of the surrounding seawater. The simulation also indicated that the presence or absence of a nipple array does not cause significant difference in reflectance on the surface. The nipple array on the tunic of the diurnal salp may have another function, such as bubble repellence, other than anti-reflection.

  4. Evolutionary loss of melanogenesis in the tunicate Molgula occulta

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    Claudia Racioppi

    2017-07-01

    Full Text Available Abstract Background Analyzing close species with diverse developmental modes is instrumental for investigating the evolutionary significance of physiological, anatomical and behavioral features at a molecular level. Many examples of trait loss are known in metazoan populations living in dark environments. Tunicates are the closest living relatives of vertebrates and typically present a lifecycle with distinct motile larval and sessile adult stages. The nervous system of the motile larva contains melanized cells associated with geotactic and light-sensing organs. It has been suggested that these are homologous to vertebrate neural crest-derived melanocytes. Probably due to ecological adaptation to distinct habitats, several species of tunicates in the Molgulidae family have tailless (anural larvae that fail to develop sensory organ-associated melanocytes. Here we studied the evolution of Tyrosinase family genes, indispensible for melanogenesis, in the anural, unpigmented Molgula occulta and in the tailed, pigmented Molgula oculata by using phylogenetic, developmental and molecular approaches. Results We performed an evolutionary reconstruction of the tunicate Tyrosinase gene family: in particular, we found that M. oculata possesses genes predicted to encode one Tyrosinase (Tyr and three Tyrosinase-related proteins (Tyrps while M. occulta has only Tyr and Tyrp.a pseudogenes that are not likely to encode functional proteins. Analysis of Tyr sequences from various M. occulta individuals indicates that different alleles independently acquired frameshifting short indels and/or larger mobile genetic element insertions, resulting in pseudogenization of the Tyr locus. In M. oculata, Tyr is expressed in presumptive pigment cell precursors as in the model tunicate Ciona robusta. Furthermore, a M. oculata Tyr reporter gene construct was active in the pigment cell precursors of C. robusta embryos, hinting at conservation of the regulatory network underlying

  5. Effect of drought stress, corm size and corm tunic on morphoecophysiological characteristics of saffron (Crocus sativus L. in greenhouse conditions

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    M. Sabet Teimouri

    2016-04-01

    Full Text Available In order to investigate the effects of corm tunic, corm weight and drought stress on saffron (Crocus sativus L., an experiment was conducted at the greenhouse of Ferdowsi University of Mashhad, Iran. Treatment were combination of four corm weights range (2-4, 4-6, 6-8 and 8-10 g, two levels of water availability (100% field capacity and drought and two levels of corm tunic (natural corm with tunic and without tunic as factorial arrangement based on completely randomized block design with three replications. The corms were divided to four groups based on their weights and removed tunics of corm in tunic free treatment. Results indicated that the highest biomass produced in irrigation, corms with tunic with maximum weight. Both chlorophyll a and b contents decreased significantly under drought stress and chlorophyll b content was 50% of chlorophyll a content. Effect of corm size and corm tunic and interaction of these treatments imposed a significant effect on the leaf number per plant, leaf weight and chlorophyll content. Effect of corm tunic in 8-10 g corm size increased ch (a/ch (b ratio and leaf number. The relative water content was decreased in drought treatment in both tunic and tunicless treatments and the best corm weight in all treatment was 6-8g and could be useful to tolerate drought stress.

  6. Swarming of pelagic tunicates associated with phytoplankton bloom in the Bay of Bengal

    Digital Repository Service at National Institute of Oceanography (India)

    Madhupratap, M.; Devassy, V.P.; Nair, S.R.S.; Rao, T.S.S.

    During the 40th cruise of R V Gaveshani, a large swarm pelagic tunicates associated with a bloom of diatoms and blue green algae was observed off Nagapattinam. The doliolid Dolioletta gegenbauri, Uljanin, the salp Thalia democratica Forskal...

  7. Magnetic properties of tunicate blood cells. II. Ascidia ceratodes.

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    Kustin, K; Robinson, W E; Frankel, R B; Spartalian, K

    1996-08-15

    The magnetic properties of intact blood cells of the tunicate Ascidia ceratodes have been measured up to 50 kOe with a SQUID susceptometer. Analysis of total metal contents by plasma emission spectroscopy and V(IV) content by epr indicates that approximately 5% of the accumulated vanadium is +4 vanadyl ion. Measured values of the magnetic moment Mp at different values of the applied magnetic field H over the temperature range T = 2-100 K depend on the magnitude of the field indicating magnetic anisotropy of the ground state. The slope of the Mp vs. H/T curve at high temperature is significantly higher than expected from electron spin S = 1 per vanadium(III) ion. The model that fits these data best is a dimer with one V(III) S = 1 ion ferromagnetically coupled to a second V(III) S = 1 ion, with spin-coupling constant J = 3.5 cm-1, and 5% of the total vanadium content in the form of a V(IV) S = 1/2 ion. Since vanadium in A. ceratodes is known to reside in at least three different types of blood cell, the excellent fit indicates that the metal is stored predominantly as a dimer regardless of blood cell type. Ferromagnetic coupling implies that the two vanadium ions in the dimer are connected by an unprotonated mu-oxo bridge.

  8. A Nanocellulose Polypyrrole Composite Based on Tunicate Cellulose

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    Dawei Zhang

    2013-01-01

    Full Text Available The water-dispersed conductive polypyrrole (PPy was prepared via the in situ oxidative chemical polymerization by using ammonium persulfate (APS as oxidant and tunicate cellulose nanocrystals (T-CNs as a dopant and template for tuning the morphologies of PPy nanoparticles. Highly flexible paper-like materials of PPy/T-CNs nanocomposites with high electrical conductivity values and good mechanical properties were prepared. The structure of nanocomposites of PPy/T-CNs was investigated by using Fourier transform infrared spectroscopy. Scanning electron microscopy and transmission electron microscopy analyses of the composites revealed that PPy consisted of nanoparticles about 2.5 nm in mean size to form a continuous coating covered on the T-CNs. The diameters of the PPy nanoparticles increased from 10 to 100 nm with the increasing pyrrole amount. Moreover, electrical properties of the obtained PPy/T-CNs films were studied using standard four-probe technique and the electrical conductivity could be as high as 10−3 S/cm.

  9. The Pharmacological Potential of Nonribosomal Peptides from Marine Sponge and Tunicates

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    Shivankar Agrawal

    2016-10-01

    Full Text Available Marine biodiversity is recognized by a wide and unique array of fascinating structures. The complex associations of marine microorganisms, especially with sponges, bryozoans, and tunicates, make it extremely difficult to define the biosynthetic source of marine natural products or to deduce their ecological significance. Marine sponges and tunicates are important source of novel compounds for drug discovery and development. Majority of these compounds are nitrogen containing and belong to non-ribosomal peptide (NRPs or mixed polyketide–NRP natural products. Several of these peptides are currently under trial for developing new drugs against various disease areas, including inflammatory, cancer, neurodegenerative disorders and infectious disease. This review features pharmacologically active NRPs from marine sponge and tunicates based on their biological activities.

  10. Evaluation of secondary metabolites from the Red Sea tunicate polyclinum constellatum

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    Chemical investigation of the Red Sea tunicate Polyclinum constellatum afforded nine compounds, identified as thymidine (1), uridine (2), adenosine (3), inosine (4), 24-methylene cholesterol (5), dihydrocholesterol (6), cholesterol (7), oleic acid (8) and 1,3-palmityl-2-palmitoleoylglycerol (9). All...

  11. A second form of collagenous lectin from the tunicate, Styela plicata.

    NARCIS (Netherlands)

    Green, P.; Luty, J.F.; Nair, S.; Radford, J.; Raftos, D.

    2006-01-01

    This study characterised a 90 kDa lectin from an invertebrate chordate, the tunicate Styela plicata. One- and two-dimensional electrophoresis showed that the apparent molecular weight of this protein is maintained under both reducing and non-reducing conditions, suggesting that its native form is a

  12. Congenital inguinal hernias associated with a rent in the common vaginal tunic in five foals.

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    Spurlock, G H; Robertson, J T

    1988-11-01

    Five foals were admitted because of colic that developed within 24 hours after birth. Physical examination revealed swelling from the inguinal region to the cranial aspect of the prepuce. Through the skin overlying the swelling, distended loops of bowel could be palpated. The hernias could be reduced with the foals restrained in dorsal recumbency. Surgical exploration showed the swelling to be an inguinal hernia with small bowel herniation through a rent in the common vaginal tunic. Concurrent rupture of the vaginal tunic should be suspected when a congenital inguinal hernia is associated with colic, swelling that extends to the prepuce, or intestine that is easily palpated within the hernial swelling. Repeated manual reduction in these cases would be of little benefit and surgical intervention would be recommended.

  13. Development of the New Zealand White Rabbit Eye: I. Pre- and Postnatal Development of Eye Tunics.

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    Abdo, M; Haddad, S; Emam, M

    2017-10-01

    The New Zealand white (NZW) rabbit has been and is right now regularly utilized in ophthalmic surgery evaluation. Inside NZW rabbit eye, the visibility of ocular structures throughout surgical procedure is fantastic. Younger rabbits are used in different ages for the evaluation of ophthalmic surgery. Complete studies of ocular development in the NZW rabbits have not been reported previously. The aim of the present investigation was to describe the major landmarks and the time course of the pre- and post-natal development of the complete eye tunics of the NZW rabbit to give a superb model as well as a fruitful area for further ophthalmological investigations. Serial histological sections of NZW rabbit prenatal (E13-E28) and post-natal (P1-P14) stages were examined, respectively. The eye of the NZW rabbit developed in a similar manner to that of the human and domestic animals eyes; the principal differences were at the time of occurrence of certain developmental events, absence of pigmentation which represent an exploited benefit for ophthalmic surgery, remarkable Bowman's membrane at E25, poor developed ciliary stroma and juvenile retinal layer until P9. In human, the basic morphogenetic processes of the development of eye tunics are completed towards the end of the first half of gestation period. However, the latter represents the beginning stage of the development of eye tunics in the rabbit. Thus, allowing various extensive ophthalmic researches to be performed. © 2017 Blackwell Verlag GmbH.

  14. Developmental signature, synaptic connectivity and neurotransmission are conserved between vertebrate hair cells and tunicate coronal cells.

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    Rigon, Francesca; Gasparini, Fabio; Shimeld, Sebastian M; Candiani, Simona; Manni, Lucia

    2018-04-15

    In tunicates, the coronal organ represents a sentinel checking particle entrance into the pharynx. The organ differentiates from an anterior embryonic area considered a proto-placode. For their embryonic origin, morphological features and function, coronal sensory cells have been hypothesized to be homologues to vertebrate hair cells. However, vertebrate hair cells derive from a posterior placode. This contradicts one of the principle historical criteria for homology, similarity of position, which could be taken as evidence against coronal cells/hair cells homology. In the tunicates Ciona intestinalis and C. robusta, we found that the coronal organ expresses genes (Atoh, Notch, Delta-like, Hairy-b, and Musashi) characterizing vertebrate neural and hair cell development. Moreover, coronal cells exhibit a complex synaptic connectivity pattern, and express neurotransmitters (Glu, ACh, GABA, 5-HT, and catecholamines), or enzymes for their synthetic machinery, involved in hair cell activity. Lastly, coronal cells express the Trpa gene, which encodes an ion channel expressed in hair cells. These data lead us to hypothesize a model in which competence to make secondary mechanoreceptors was initially broadly distributed through placode territories, but has become confined to different placodes during the evolution of the vertebrate and tunicate lineages. © 2017 Wiley Periodicals, Inc.

  15. 3,7-Isoquinoline quinones from the ascidian tunicate Ascidia virginea.

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    Possner, Sven T; Schroeder, Frank C; Rapp, Hans Tore; Sinnwell, Volker; Franke, Stefan; Francke, Wittko

    2017-07-14

    A new isoquinoline quinone system and its iodinated derivatives were isolated from the ascidian tunicate Ascidia virginea Müller 1776 (Phlebobranchia: Ascidiidae). Structures were elucidated by spectroscopic methods and derivatization reactions. Ascidine A (3,7-dihydro-1,8-dihydroxy-4-(4'-hydroxyphenyl)isoquinoline-3,7-dione (1), ascidine B (3,7-dihydro-1,8-dihydroxy-4-(4'-hydroxy-3'-iodophenyl)isoquinoline-3,7-dione (2), and ascidine C (3,7-dihydro-1,8-dihydroxy-4-(4'-hydroxy-3',5'-diiodophenyl)isoquinoline-3,7-dione (3) represent a novel type of tyrosine-derived alkaloids.

  16. Filarial granuloma of the testicular tunic mimicking a testicular neoplasm: a case report

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    Barreto Savio G

    2008-10-01

    Full Text Available Abstract Introduction Any firm or solid intratesticular mass on examination and/or any hypoechoic area within the tunica albuginea on imaging is markedly suspicious for testicular cancer. Filarial involvement of the testicular tunic has not been reported previously. Case presentation A 32-year-old man presented with a history of noticing a swelling in his right testicle for a period of 1 month which had become painful over the 10 days before presentation. Pre-operative imaging failed to shed light on the nature of the lesions (malignant or benign. The diagnostic dilemma was explained to the patient and informed consent was obtained for an orchiectomy. The patient underwent a high inguinal orchiectomy. The histopathology revealed a filarial granuloma of the testicular tunic. Conclusion While it is generally regarded that any testicular swelling, especially in a young person, should be treated as a malignancy unless proven otherwise, it is important to remember that infectious diseases such as filariasis and tuberculosis may mimic neoplasms. Careful consideration of these diagnoses must be given when dealing with testicular swellings especially in areas where the prevalence of these diseases is high.

  17. Tunicate-Inspired Gallic Acid/Metal Ion Complex for Instant and Efficient Treatment of Dentin Hypersensitivity.

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    Prajatelistia, Ekavianty; Ju, Sung-Won; Sanandiya, Naresh D; Jun, Sang Ho; Ahn, Jin-Soo; Hwang, Dong Soo

    2016-04-20

    Dentin hypersensitivity is sharp and unpleasant pains caused by exposed dentinal tubules when enamel outside of the tooth wears away. The occlusion of dentinal tubules via in situ remineralization of hydroxyapatite is the best method to alleviate the symptoms caused by dentin hypersensitivity. Commercially available dental desensitizers are generally effective only on a specific area and are relatively toxic, and their performance usually depends on the skill of the clinician. Here, a facile and efficient dentin hypersensitivity treatment with remarkable aesthetic improvement inspired by the tunicate-self-healing process is reported. As pyrogallol groups in tunicate proteins conjugate with metal ions to heal the torn body armor of a tunicate, the ingenious mechanism by introducing gallic acid (GA) as a cheap, abundant, and edible alternative to the pyrogallol groups of the tunicate combined with a varied daily intake of metal ion sources is mimicked. In particular, the GA/Fe(3+) complex exhibits the most promising results, to the instant ≈52% blockage in tubules within 4 min and ≈87% after 7 d of immersion in artificial saliva. Overall, the GA/metal ion complex-mediated coating is facile, instant, and effective, and is suggested as an aesthetic solution for treating dentin hypersensitivity. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  18. Bacterial biosynthesis and maturation of the didemnin anti-cancer agents

    KAUST Repository

    Xü, Ying

    2012-05-23

    The anti-neoplastic agent didemnin B from the Caribbean tunicate Trididemnum solidum was the first marine drug to be clinically tested in humans. Because of its limited supply and its complex cyclic depsipeptide structure, considerable challenges were encountered during didemnin B\\'s development that continue to limit aplidine (dehydrodidemnin B), which is currently being evaluated in numerous clinical trials. Herein we show that the didemnins are bacterial products produced by the marine α-proteobacteria Tistrella mobilis and Tistrella bauzanensis via a unique post-assembly line maturation process. Complete genome sequence analysis of the 6,513,401 bp T. mobilis strain KA081020-065 with its five circular replicons revealed the putative didemnin biosynthetic gene cluster (did) on the 1,126,962 bp megaplasmid pTM3. The did locus encodes a 13-module hybrid non-ribosomal peptide synthetase-polyketide synthase enzyme complex organized in a collinear arrangement for the synthesis of the fatty acylglutamine ester derivatives didemnins X and Y rather than didemnin B as first anticipated. Imaging mass spectrometry of T. mobilis bacterial colonies captured the time-dependent extracellular conversion of the didemnin X and Y precursors to didemnin B, in support of an unusual post-synthetase activation mechanism. Significantly, the discovery of the didemnin biosynthetic gene cluster may provide a long-term solution to the supply problem that presently hinders this group of marine natural products and pave the way for the genetic engineering of new didemnin congeners. © 2012 American Chemical Society.

  19. Thraustochytrid fungoid protists in faecal pellets of the tunicate Pegea confoederata, their tolerance to deep-sea conditions and implication in degradation processes

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    Raghukumar, S.; Raghukumar, C.

    During a swarm of the tunicate Pegea confoederata (salp) in the northern Arabian Sea, we examined their faecal pellets for thraustochytrid protists and bacteria to understand the role of the former in decomposition processes in the sea. Fresh faecal...

  20. An updated 18S rRNA phylogeny of tunicates based on mixture and secondary structure models

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    Shenkar Noa

    2009-08-01

    Full Text Available Abstract Background Tunicates have been recently revealed to be the closest living relatives of vertebrates. Yet, with more than 2500 described species, details of their evolutionary history are still obscure. From a molecular point of view, tunicate phylogenetic relationships have been mostly studied based on analyses of 18S rRNA sequences, which indicate several major clades at odds with the traditional class-level arrangements. Nonetheless, substantial uncertainty remains about the phylogenetic relationships and taxonomic status of key groups such as the Aplousobranchia, Appendicularia, and Thaliacea. Results Thirty new complete 18S rRNA sequences were acquired from previously unsampled tunicate species, with special focus on groups presenting high evolutionary rate. The updated 18S rRNA dataset has been aligned with respect to the constraint on homology imposed by the rRNA secondary structure. A probabilistic framework of phylogenetic reconstruction was adopted to accommodate the particular evolutionary dynamics of this ribosomal marker. Detailed Bayesian analyses were conducted under the non-parametric CAT mixture model accounting for site-specific heterogeneity of the evolutionary process, and under RNA-specific doublet models accommodating the occurrence of compensatory substitutions in stem regions. Our results support the division of tunicates into three major clades: 1 Phlebobranchia + Thaliacea + Aplousobranchia, 2 Appendicularia, and 3 Stolidobranchia, but the position of Appendicularia could not be firmly resolved. Our study additionally reveals that most Aplousobranchia evolve at extremely high rates involving changes in secondary structure of their 18S rRNA, with the exception of the family Clavelinidae, which appears to be slowly evolving. This extreme rate heterogeneity precluded resolving with certainty the exact phylogenetic placement of Aplousobranchia. Finally, the best fitting secondary-structure and CAT-mixture models

  1. Genome Sequence of Vibrio campbellii Strain UMTGB204, a Marine Bacterium Isolated from a Green Barrel Tunicate

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    Gan, Huan You; Noor, Mohd Ezhar Mohd; Saari, Nur Azna; Musa, Najiah; Mustapha, Baharim; Usup, Gires

    2015-01-01

    Vibrio campbellii strain UMTGB204 was isolated from a green barrel tunicate. The genome of this strain comprises 5,652,224 bp with 5,014 open reading frames, 9 rRNAs, and 116 tRNAs. It contains genes related to virulence and environmental tolerance. Gene clusters for the biosynthesis of nonribosomal peptides and bacteriocin were also identified. PMID:25814609

  2. Proceraea exoryxae sp. nov. (Annelida, Syllidae, Autolytinae, the first known polychaete miner tunneling into the tunic of an ascidian

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    Daniel Martin

    2017-06-01

    Full Text Available While studying organisms living in association with the solitary tunicate Phallusia nigra (Ascidiacea, Ascidiidae from a shallow fringing reef at Zeytouna Beach (Egyptian Red Sea, one of the collected ascidians showed peculiar perforations on its tunic. Once dissected, the perforations revealed to be the openings of a network of galleries excavated in the inner tunic (atrium by at least six individuals of a polychaetous annelid. The worms belonged to the Autolytinae (Syllidae, a subfamily that is well known to include specialized predators and/or symbionts, mostly associated with cnidarians. The Red Sea worms are here described as Proceraea exoryxae sp. nov., which are anatomically distinguished by the combination of simple chaetae only in anterior chaetigers, and a unique trepan with 33 teeth in one outer ring where one large tooth alternates with one medium-sized tricuspid tooth, and one inner ring with small teeth located just behind the large teeth. Male and female epitokes were found together with atokous individuals within galleries. Proceraea exoryxae sp. nov. constitutes the first known miner in the Autolytinae and the second species in this taxon known to live symbiotically with ascidians. The implications of finding this specialized parasite are discussed considering that Phallusia nigra has been introduced worldwide, in tropical and sub-tropical ecosystems, where it has the potential of becoming invasive.

  3. Autophagic dedifferentiation induced by cooperation between TOR inhibitor and retinoic acid signals in budding tunicates.

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    Kawamura, Kaz; Yoshida, Takuto; Sekida, Satoko

    2018-01-15

    Asexual bud development in the budding tunicate Polyandrocarpa misakiensis involves transdifferentiation of multipotent epithelial cells, which is triggered by retinoic acid (RA), and thrives under starvation after bud isolation from the parent. This study aimed to determine cell and molecular mechanisms of dedifferentiation that occur during the early stage of transdifferentiation. During dedifferentiation, the numbers of autophagosomes, lysosomes, and secondary lysosomes increased remarkably. Mitochondrial degradation and exosome discharge also occurred in the atrial epithelium. Autophagy-related gene 7 (Atg7) and lysosomal proton pump A gene (PumpA) were activated during the dedifferentiation stage. When target of rapamycin (TOR) inhibitor was administered to growing buds without isolating them from the parent, phagosomes and secondary lysosomes became prominent. TOR inhibitor induced Atg7 only in the presence of RA. In contrast, when growing buds were treated with RA, lysosomes, secondary lysosomes, and mitochondrial degradation were prematurely induced. RA significantly activated PumpA in a retinoid X receptor-dependent manner. Our results indicate that in P. misakiensis, TOR inhibition and RA signals act in synergy to accomplish cytoplasmic clearance for dedifferentiation. Copyright © 2017 Elsevier Inc. All rights reserved.

  4. Characterization and transcription studies of a phytochelatin synthase gene from the solitary tunicate Ciona intestinalis exposed to cadmium

    Energy Technology Data Exchange (ETDEWEB)

    Franchi, Nicola [Department of Biology, University of Padova, Padova (Italy); Department of Biological, Chemical, Pharmaceutical Science and Technology, University of Palermo, Palermo (Italy); Piccinni, Ester [Department of Biology, University of Padova, Padova (Italy); Ferro, Diana [Department of Biology, University of Padova, Padova (Italy); Institute for Evolution and Biodiversity, Westfälische Wilhelms-Universität, Münster (Germany); Basso, Giuseppe [Department of Woman and Child Health, University of Padova, Padova (Italy); Spolaore, Barbara [CRIBI Biotechnology Centre, University of Padova, Padova (Italy); Department of Pharmaceutical and Pharmacological Sciences, University of Padova, Padova (Italy); Santovito, Gianfranco, E-mail: gianfranco.santovito@unipd.it [Department of Biology, University of Padova, Padova (Italy); Ballarin, Loriano [Department of Biology, University of Padova, Padova (Italy)

    2014-07-01

    Highlights: • Ciona intestinalis have a functional phytochelatin synthase (PCS) gene (cipcs). • CiPCS amino acid sequence is phylogentically related to other metazoan PCSs. • CiPCS catalyze the synthesis of PC2. • cipcs are mostly transcribed in circulating hemocytes, in both tunic and blood lacunae. • Cadmium exposure results in a significant increase of cipcs and cipcna transcription. - Abstract: The major thiol-containing molecules involved in controlling the level of intracellular ROS in eukaryotes, acting as a nonenzymatic detoxification system, are metallothioneins (MTs), glutathione (GSH) and phytochelatins (PCs). Both MTs and GSH are well-known in the animal kingdom. PC was considered a prerogative of the plant kingdom but, in 2001, a phytochelatin synthase (PCS) gene was described in the nematode Caenorhabditis elegans; additional genes encoding this enzyme were later described in the earthworm Eisenia fetida and in the parasitic nematode Schistosoma mansoni but scanty data are available, up to now, for Deuterostomes. Here, we describe the molecular characteristics and transcription pattern, in the presence of Cd, of a PCS gene from the invertebrate chordate Ciona intestinalis, a ubiquitous solitary tunicate and demonstrate the presence of PCs in tissue extracts. We also studied mRNA localization by in situ hybridization. In addition, we analyzed the behavior of hemocytes and tunic cells consequent to Cd exposure as well as the transcription pattern of the Ciona orthologous for proliferating cell nuclear antigen (PCNA), usually considered a proliferation marker, and observed that cell proliferation occurs after 96 h of Cd treatment. This matches the hypothesis of Cd-induced cell proliferation, as already suggested by previous data on the expression of a metallothionein gene in the same animal.

  5. METHOD OF NON-CONTACT PHOTOLUMINESCENT DIAGNOSTICS OF THE EYE FIBROUS TUNIC CONDITION

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    S. Yu. Petrov

    2018-01-01

    Full Text Available Non-contact optical diagnostics of structural disorders of the eye has a number of advantages: high speed, accuracy and a large range of parameters available for analysis. The paper presents the results of studies of the photoluminescence of the fibrous tunic of the eye, excited by polarized light, depending on the intraocular pressure. In the experiments, isolated de-epithelized eyes of the rabbit were used, inside of which pressure up to 50 mm Hg was artificially created. Under these conditions, the cornea and sclera were illuminated with linearly polarized light at wavelengths of 250, 350 and 450 nm, exciting photoluminescence in the wavelength range up to 700 nm. Cross and co-polarized photoluminescence spectra excited by linearly polarized light were obtained. It has been established that, when excited by polarized light, the photoluminescence of the cornea is partially polarized. Depending on the wavelength of the photoluminescence, the degree of polarization varies from 0.2 to 0.35. It is shown that the degree of polarization of the photoluminescence of the cornea of the eye upon excitation by linearly polarized light can be used as a measurable parameter for assessing the physiological state of the eye. It is shown that the photoluminescence spectrum consists of two bands with maxima near 460-470 and 430-440 nm. These bands are assigned, respectively, to pyridinnucleotides and glycosylated collagen. A significant contribution can be made by the epithelium of the eye, which contains riboflavin with characteristic absorption bands near 450 and 365 nm. When excited at 450 nm, the photoluminescence maximum is located near 540 nm, which corresponds to the spectrum of fluorophores in the endothelium and epithelium. The spectrum of photoluminescence upon excitation at a wavelength of 250 nm can be attributed to tryptophan located in the intraocular lens.

  6. Control of spread of Augusta disease caused by tobacco necrosis virus in tulip by composting residual waste of small bulbs, tunics, roots and soil debris

    NARCIS (Netherlands)

    Asjes, C.J.; Barnhoorn, G.J.

    2002-01-01

    In this study the elimination of the infectious virus/fungus complex of tobacco necrosis virus (TNV; cause of Augusta disease in tulip) and Olpidium brassicae in different soil types and residual waste material of soil debris, small tulip bulbs, roots and tunics by temperature treatments of

  7. Isolation and Characterization of a Shewanella Phage–Host System from the Gut of the Tunicate, Ciona intestinalis

    Directory of Open Access Journals (Sweden)

    Brittany Leigh

    2017-03-01

    Full Text Available Outnumbering all other biological entities on earth, bacteriophages (phages play critical roles in structuring microbial communities through bacterial infection and subsequent lysis, as well as through horizontal gene transfer. While numerous studies have examined the effects of phages on free-living bacterial cells, much less is known regarding the role of phage infection in host-associated biofilms, which help to stabilize adherent microbial communities. Here we report the cultivation and characterization of a novel strain of Shewanella fidelis from the gut of the marine tunicate Ciona intestinalis, inducible prophages from the S. fidelis genome, and a strain-specific lytic phage recovered from surrounding seawater. In vitro biofilm assays demonstrated that lytic phage infection affects biofilm formation in a process likely influenced by the accumulation and integration of the extracellular DNA released during cell lysis, similar to the mechanism that has been previously shown for prophage induction.

  8. Isolation and Total Synthesis of Stolonines A-C, Unique Taurine Amides from the Australian Marine Tunicate Cnemidocarpa stolonifera.

    Science.gov (United States)

    Tran, Trong D; Pham, Ngoc B; Ekins, Merrick; Hooper, John N A; Quinn, Ronald J

    2015-07-22

    Cnemidocarpa stolonifera is an underexplored marine tunicate that only occurs on the tropical to subtropical East Coast of Australia, with only two pyridoacridine compounds reported previously. Qualitative analysis of the lead-like enhanced fractions of C. stolonifera by LC-MS dual electrospray ionization coupled with PDA and ELSD detectors led to the identification of three new natural products, stolonines A-C (1-3), belonging to the taurine amide structure class. Structures of the new compounds were determined by NMR and MS analyses and later verified by total synthesis. This is the first time that the conjugates of taurine with 3-indoleglyoxylic acid, quinoline-2-carboxylic acid and β-carboline-3-carboxylic acid present in stolonines A-C (1-3), respectively, have been reported. An immunofluorescence assay on PC3 cells indicated that compounds 1 and 3 increased cell size, induced mitochondrial texture elongation, and caused apoptosis in PC3 cells.

  9. Platform technologies for decellularization, tunic-specific cell seeding, and in vitro conditioning of extended length, small diameter vascular grafts.

    Science.gov (United States)

    Fercana, George; Bowser, Devon; Portilla, Margarita; Langan, Eugene M; Carsten, Christopher G; Cull, David L; Sierad, Leslie N; Simionescu, Dan T

    2014-12-01

    The aim of this study was to generate extended length, small diameter vascular scaffolds that could serve as potential grafts for treatment of acute ischemia. Biological tissues are considered excellent scaffolds, which exhibit adequate biological, mechanical, and handling properties; however, they tend to degenerate, dilate, and calcify after implantation. We hypothesized that chemically stabilized acellular arteries would be ideal scaffolds for development of vascular grafts for peripheral surgery applications. Based on promising historical data from our laboratory and others, we chose to decellularize bovine mammary and femoral arteries and test them as scaffolds for vascular grafting. Decellularization of such long structures required development of a novel "bioprocessing" system and a sequence of detergents and enzymes that generated completely acellular, galactose-(α1,3)-galactose (α-Gal) xenoantigen-free scaffolds with preserved collagen, elastin, and basement membrane components. Acellular arteries exhibited excellent mechanical properties, including burst pressure, suture holding strength, and elastic recoil. To reduce elastin degeneration, we treated the scaffolds with penta-galloyl glucose and then revitalized them in vitro using a tunic-specific cell approach. A novel atraumatic endothelialization protocol using an external stent was also developed for the long grafts and cell-seeded constructs were conditioned in a flow bioreactor. Both decellularization and revitalization are feasible but cell retention in vitro continues to pose challenges. These studies support further efforts toward clinical use of small diameter acellular arteries as vascular grafts.

  10. Perforation with and without vinegar injection as a mitigation strategy against two invasive tunicates, Ciona intestinalis and Styela clava

    Directory of Open Access Journals (Sweden)

    Marianne PARENT

    2011-01-01

    Full Text Available Ciona intestinalis and Styela clava, two nuisance species for Prince Edward Island’s blue mussel industry, were treated with individual perforations using nails or hypodermic needles. Other treatments using the same species included simultaneous perforations using perforation devices with low, medium and high needle density, either with or without vinegar injections. Mortality levels estimated for all ranges of individual perforations were significantly higher than mortality levels estimated in control groups during treatments conducted at laboratory facilities. Mortality of C. intestinalis reached 100% for 60 individual perforations or injection of 0.05 mL of vinegar. In S. clava, 100 individual perforations resulted in 100% mortality. Two applications of the high-density perforation device resulted in 80% mortality of C. intestinalis. During field testing, two applications of the same high-density needle device did not significantly decrease C. intestinalis wet weight, regardless of the addition of vinegar. The field applicability of perforation upon tunicates fouling mussel socks was at least in part limited by the uneven surface created by the mussels and the possible inhibition of bacterial growth caused by low water temperatures. Perforation and vinegar injection showed to be successful in laboratory trials and should be further studied with different perforation devices under field conditions.

  11. Biogenic debris from the pelagic tunicate, Oikopleura dioica, and its role in the vertical transport of a transuranium element

    International Nuclear Information System (INIS)

    Gorsky, G.; Fisher, N.S.; Fowler, S.W.

    1984-01-01

    The accumulation and retention of 241 Am by the pelagic tunicate Oikopleura dioica were examined using laboratory cultures and radiotracer methodology. Animals (i.e., trunks and tails) and discarded empty houses accumulated Am from seawater, giving volume/volume concentration factors of 59 +- 8 and 10 +- 1, respectively. The half-time for retention of Am in empty labelled houses transferred to non-contaminated seawater was 29 h; the retention half-time of Am in houses discarded by larvaceans feeding on Am-labelled diatoms was 219 h; the half-time of Am in fecal pellets produced by animals feeding on a monospecific diet of diatoms was 134 h, and 247 h for fecal pellets from animals fed a mixed diet. Approximately 30% of filtered cells remained in houses after the houses were discarded. Sinking rates of discarded houses and fecal pellets were found to vary with temperature and size, ranging from 26-157 m day -1 (houses) and from 25-166 m day -1 (fecal pellets). The ubiquity and abundance of appendicularians, together with their prodigious production of houses (e.g., 10 +- 2 houses day -1 at 17 0 C for each experimental animal) point to their potential significance in the vertical transport of Am, and probably other reactive metals, to intermediate depths in the ocean. (author)

  12. Use of a lyophilized bovine pericardium graft to repair tunical defect in patients with Peyronie's disease: experience in a clinical setting.

    Science.gov (United States)

    Otero, Javier Romero; Gómez, Borja García; Polo, Jose Medina; Mateo, Carlos Pascual; Barreras, Silvia García; Cruz, Eduard García; de la Viña, Javier de la Riva; Antolín, Alfredo Rodríguez

    2017-01-01

    Many different materials are available for grafting during surgery for Peyronie's disease (PD). To study the outcomes associated with the use of a lyophilized bovine pericardium graft (Peri-Guard®) to repair tunical defects in patients with PD, descriptive study of 43 patients with disabling penile curvature was performed. Curvature was measured before and after the intervention using a standardized procedure. Surgical technique was plaque excision and grafting of the tunical defect carried out by a single surgeon. A lyophilized bovine pericardium patch was used for grafting. We measured the change in penile curvature and length, the ability to perform successful sexual intercourse without further pharmacological or surgical treatment, and the satisfaction with treatment. Follow-up data were available for a total of 41 patients. Median age was 50 years (IQR 48-52); mean follow-up time was 14 ± 6 months. Complete penile straightening was achieved in 33 patients (80.5%) and five patients (12.2%) had curvature under 20°. Three months after surgery and stretching therapy, mean (s.d.) flaccid penile length increased from 11.2 ± 2.8 cm to 12.1 ± 2.9 cm (P = 0.062). Seventy-five percentage of patients reported being able to achieve successful intercourse without further treatment. Eighty-five percentage of patients reported to be satisfied with the treatment. There was no evidence of tissue rejection or infection, and only four patients suffered an adverse event. Plaque excision and grafting of the tunical defect with lyophilized bovine pericardium seems to be a safe and effective treatment for patients with PD.

  13. Isolation, properties and structural studies on a compound from tunicate blood cells that may be involved in vanadium accumulation.

    Science.gov (United States)

    Macara, I G; McLeod, G C; Kustin, K

    1979-01-01

    A novel compound, for which the trivial name tunichrome is proposed, was isolated from the vanadium-rich blood cells of the tunicate Ascidia niga. Preliminary structural studies suggest a molecular weight of about 390, the presence of conjugated vinyl groups, and an acidic group, possibly carboxyl, with an apparent pKa of 3.0. Elements C, H, N and O comprise 98.4% of the sample weight, the number of atoms per mol of tunichrome being 14.1, 22.2, 1.5 and 10.6 respectively, which indicates some heterogeneity in the sample. Tunichrome readily reduces Fe(III) and V(V). In an initial fast step, 2 mol of V(V) are reduced, or 4 mol of Fe(III)-phenanthroline per mol of tunichrome; in a further slow reaction, another 9 mol of Fe(III)-phenanthroline or Fe(III)-bipyridine are reduced. The initial reaction is first-order with respect to tunichrome and Fe(III). Above pH 3.5, tunichrome is rapidly hydrolysed, 13 mol of OH- being consumed per mol of tunichrome. The hydrolysis involves polymerization and loss of the characteristic absorption peak at 325 nm. It is suggested that the presence of tunichrome may be linked to vanadium accumulation by the blood cells. The mechanism involves entry of vanadate via an anionic channel into vacuoles of the blood cells, where it is reduced to V(IV) or V(III), both of which, being cationic, cannot escape from the vacuole. PMID:496893

  14. Enzymatic laundry for old clothes: immobilized alpha-amylase from Bacillus sp. for the biocleaning of an ancient Coptic tunic.

    Science.gov (United States)

    Ferrari, Martina; Mazzoli, Roberto; Morales, Simona; Fedi, Mariaelena; Liccioli, Lucia; Piccirillo, Anna; Cavaleri, Tiziana; Oliva, Cinzia; Gallo, Paolo; Borla, Matilde; Cardinali, Michela; Pessione, Enrica

    2017-09-01

    The classification and conservation of ancient artworks (belonging to collections) is of important cultural, historical, and economic concern. However, ancient textiles often display structural damage that renders them fragile and unsuitable for exhibition. One of the most common types of damage is linked to erroneous restoration treatments, among which the application of glues to consolidate cuts. Harsh strategies, such as mechanical or chemical treatments, are not suitable since they can cause further impairment of the fabric, whereas mild approaches, like wet cleaning, are often ineffective, as also demonstrated by the present study. Here, we have explored the possibility of using gellan-immobilized enzymes of bacterial origin (Bacillus alpha-amylase) to obtain a satisfactory starch removal from a damaged archaeological tunic-shroud from the Turin Egyptian Museum (Italy), without altering the original yarns or textile fibers. This method, already applied to clean casein-damaged wall paintings, as well as cotton, silk, and linen fabrics, has proved to be optimal for the treatment of a wool burial shroud and to be able to definitively solve fragile textile restoration problems. Moreover, efforts have been made to obtain insights into the artwork: a multidisciplinary approach has allowed to obtain a correct chronological attribution (radiocarbon dating) and fabric fiber characterization (SEM-EDX) as well as shed light on the colored parts and dark stains (FORS+IRFC and XRF). Finally, the evaluation of the type of glue, by Fourier transform infrared spectroscopy, has suggested the best enzyme for glue removal. These results have demonstrated that a mild bio-based approach is a successful tool for the treatment of archaeological textiles in critical conditions.

  15. Bioactive 2(1H-Pyrazinones and Diketopiperazine Alkaloids from a Tunicate-Derived Actinomycete Streptomyces sp.

    Directory of Open Access Journals (Sweden)

    Lamiaa A. Shaala

    2016-08-01

    Full Text Available As a part of our ongoing effort to allocate marine microbial bioactive leads, a tunicate-derived actinomycete, Streptomyces sp. Did-27, was investigated. Three new 2(1H-pyrazinones derivatives, (S-6-(sec-butyl-3-isopropylpyrazin-2(1H-one (1, (S-3-(sec-butyl-6-isopropylpyrazin-2(1H-one (2 and (S-6-(sec-butyl-3-isobutylpyrazin-2(1H-one (3, together with the known (1H-pyrazinones analogues deoxymutaaspergillic acid (4, 3,6-diisobutyl-2(1H-pyrazinone (5 and 3,6-di-sec-butyl-2(1H-pyrazinone (6, and the diketopiperazine alkaloids cyclo(6-OH-d-Pro-l-Phe (7, bacillusamide B (8, cyclo(l-Pro-l-Leu and cyclo(l-Pro-l-Ile (10 were isolated from this strain. The structures of the compounds were determined by study of their one- and two-dimensional NMR spectra as well as high-resolution mass spectral determinations. Compound 4 was reported previously as a synthetic product, while compound 6 was reported as 2-hydroxy-3,6-di-sec-butylpyrazine. Herein, we report the complete NMR data for compounds 4 and 6. The compounds were evaluated for their cytotoxic activities against three cell lines. Compound 5 showed potent and selective activity against HCT-116 cell line with IC50 of 1.5 μg/mL, while 1–10 showed variable cytotoxic activities against these cancer cell lines. These results provide further understanding about the chemistry and bioactivities of the alkylated 2(1H-pyrazinone derivatives.

  16. Comparison of the properties of cellulose nanocrystals and cellulose nanofibrils isolated from bacteria, tunicate, and wood processed using acid, enzymatic, mechanical, and oxidative methods.

    Science.gov (United States)

    Sacui, Iulia A; Nieuwendaal, Ryan C; Burnett, Daniel J; Stranick, Stephan J; Jorfi, Mehdi; Weder, Christoph; Foster, E Johan; Olsson, Richard T; Gilman, Jeffery W

    2014-05-14

    This work describes the measurement and comparison of several important properties of native cellulose nanocrystals (CNCs) and cellulose nanofibrils (CNFs), such as crystallinity, morphology, aspect ratio, and surface chemistry. Measurement of the fundamental properties of seven different CNCs/CNFs, from raw material sources (bacterial, tunicate, and wood) using typical hydrolysis conditions (acid, enzymatic, mechanical, and 2,2,6,6-tetramethylpiperidinyl-1-oxyl (TEMPO)-mediated oxidation), was accomplished using a variety of measurement methods. Atomic force microscopy (AFM), transmission electron microscopy (TEM), and 13C cross-polarization magic angle spinning (CPMAS) nuclear magnetic resonance (NMR) spectroscopy were used to conclude that CNCs, which are rodlike in appearance, have a higher crystallinity than CNFs, which are fibrillar in appearance. CNC aspect ratio distributions were measured and ranged from 148±147 for tunicate-CNCs to 23±12 for wood-CNCs. Hydrophobic interactions, measured using inverse gas chromatography (IGC), were found to be an important contribution to the total surface energy of both types of cellulose. In all cases, a trace amount of naturally occurring fluorescent compounds was observed after hydrolysis. Confocal and Raman microscopy were used to confirm that the fluorescent species were unique for each cellulose source, and demonstrated that such methods can be useful for monitoring purity during CNC/CNF processing. This study reveals the broad, tunable, multidimensional material space in which CNCs and CNFs exist.

  17. Rapid detection assay for the invasive vase tunicate, Ciona intestinalis, using loop-mediated isothermal amplification combined with lateral flow dipstick

    Directory of Open Access Journals (Sweden)

    Ahmed Siah

    2013-01-01

    Full Text Available Invasive tunicate species threaten the shellfish aquaculture industry not only in Prince Edward Island (PEI but also nationally andworldwide. Rapid screening tools for water samples are crucial for the efficient management of aquatic invasive species. This project aims todevelop a rapid detection assay capable of identifying larvae of the vase tunicate, Ciona intestinalis, in seawater. In this study, a loopmediatedisothermal amplification (LAMP method has been developed to detect the 18S ribosomal DNA extracted from C. intestinalis. Thisassay was performed in three steps: 1 a DNA extraction step using a direct lysis buffer, 2 an amplification step using a heating block, and 3a detection step using a lateral flow dipstick. The sensitivity of the assay was estimated at one larva spiked in 100 L of seawater and theturnaround time of the assay was assessed at 80 min including the lysis step. Given the advantages of this assay such as rapid amplification,ease of use and detection, it could be implemented for monitoring bays and estuaries. In the future, rapid diagnostic assays will constitute anew generation of diagnostic platforms enabling the early detection of non-indigenous invasive species.

  18. Ascidia subterranea sp. nov. (Phlebobranchia: Ascidiidae), a new tunicate belonging to the A. sydneiensis Stimpson, 1855 group, found as burrow associate of Axiopsis serratifrons A. Milne-Edwards, 1873 (Decapoda: Axiidae) on Derawan Island, Indonesia.

    Science.gov (United States)

    Kneer, Dominik; Monniot, Francoise; Stach, Thomas; Christianen, Marjolijn J A

    2013-02-22

    A new tunicate, Ascidia subterranea sp. nov., was found in burrows of the axiid crustacean Axiopsis serratifrons on Derawan Island, Indonesia. It differs from other ascidians in its habitat as well as numerous morphological peculiarities which are described in detail. The shrimp Rostronia stylirostris Holthuis, 1952 was found inside A. subterranea sp. nov., and 4 species of bivalves, 3 species of polychaetes, 1 gastropod, 1 polyplacophoran and 1 sponge species were found as burrow associates besides the ascidian.

  19. Presence of the tunicate Asterocarpa humilis on ship hulls and aquaculture facilities in the coast of the Biobío Region, south central Chile

    Directory of Open Access Journals (Sweden)

    Javier Pinochet

    2017-08-01

    Full Text Available Non-native ascidians are important members of the fouling community associated with artificial substrata and man-made structures. Being efficient fouling species, they are easily spread by human-mediated transports (e.g., with aquaculture trade and maritime transports. This is exemplified by the ascidian Asterocarpa humilis which displays a wide distribution in the Southern Hemisphere and has been recently reported in the Northern Hemisphere (NW Europe. In continental Chile, its first report dates back from 2000 for the locality of Antofagasta (23°S. Although there was no evidence about the vectors of introduction and spread, nor the source, some authors suggested maritime transport by ship hulls and aquaculture devices as putative introduction pathways and vectors. In the present study, we report for the first time the presence of A. humilis on the hull of an international ship in a commercial port in Concepción bay (36°S, south central Chile. We also found one individual associated to a seashell farm, 70 km far from Concepción bay. Further individuals were subsequently identified within Concepción bay: one juvenile settled upon international harbor pilings and a dozen individuals along aquaculture seashell longlines. For the first specimens sampled, species identification was ascertained using both morphological criteria and molecular barcoding, using the mitochondrial gene cytochrome c oxidase subunit I (COI and a nuclear gene (ribosomal RNA 18S. The nuclear 18S gene and the mitochondrial gene COI clearly assigned the specimens to A. humilis, confirming our morphological identification. Two haplotypes were obtained with COI corresponding to haplotypes previously obtained with European and Northern Chilean specimens. The present study thus reports for the first time the presence of A. humilis in the Araucanian ecoregion, documenting the apparent expansion of this non-native tunicate in Chile over 2,000 km, spanning over three ecoregions

  20. Presence of the tunicateAsterocarpa humilison ship hulls and aquaculture facilities in the coast of the Biobío Region, south central Chile.

    Science.gov (United States)

    Pinochet, Javier; Leclerc, Jean-Charles; Brante, Antonio; Daguin-Thiébaut, Claire; Díaz, Christian; Tellier, Florence; Viard, Frédérique

    2017-01-01

    Non-native ascidians are important members of the fouling community associated with artificial substrata and man-made structures. Being efficient fouling species, they are easily spread by human-mediated transports (e.g., with aquaculture trade and maritime transports). This is exemplified by the ascidian Asterocarpa humilis which displays a wide distribution in the Southern Hemisphere and has been recently reported in the Northern Hemisphere (NW Europe). In continental Chile, its first report dates back from 2000 for the locality of Antofagasta (23°S). Although there was no evidence about the vectors of introduction and spread, nor the source, some authors suggested maritime transport by ship hulls and aquaculture devices as putative introduction pathways and vectors. In the present study, we report for the first time the presence of A. humilis on the hull of an international ship in a commercial port in Concepción bay (36°S), south central Chile. We also found one individual associated to a seashell farm, 70 km far from Concepción bay. Further individuals were subsequently identified within Concepción bay: one juvenile settled upon international harbor pilings and a dozen individuals along aquaculture seashell longlines. For the first specimens sampled, species identification was ascertained using both morphological criteria and molecular barcoding, using the mitochondrial gene cytochrome c oxidase subunit I (COI) and a nuclear gene (ribosomal RNA 18S). The nuclear 18S gene and the mitochondrial gene COI clearly assigned the specimens to A. humilis, confirming our morphological identification. Two haplotypes were obtained with COI corresponding to haplotypes previously obtained with European and Northern Chilean specimens. The present study thus reports for the first time the presence of A. humilis in the Araucanian ecoregion, documenting the apparent expansion of this non-native tunicate in Chile over 2,000 km, spanning over three ecoregions. In addition

  1. Selenium-loaded cellulose film derived from Styela clava tunic accelerates the healing process of cutaneous wounds in streptozotocin-induced diabetic Sprague-Dawley rats.

    Science.gov (United States)

    Song, Sung Hwa; Kim, Ji Eun; Koh, Eun Kyoung; Sung, Ji Eun; Lee, Hyun Ah; Yun, Woo Bin; Hong, Jin Tae; Hwang, Dae Youn

    2018-02-07

    Aims of this study is to evaluate the therapeutic effects and toxicity of Se-loaded cellulose film originated from Styela clava tunic (SeSCTF) on cutaneous wounds during diabetic conditions. Alterations in skin regeneration, angiogenesis and toxicity were examined using streptozotocine (STZ)-induced diabetic Sprague Dawley ® (SD) rats with surgical skin wounds after application of SeSCTF for 12 days. SCTF showed high tensile strength (1.64 MPa), low elongation (28.59%), low water vapor transmission rate (WVTR) and outstanding porous structure. Although SeSCTF application did not induce any significant alterations in glucose concentration or toxicity, wound morphology was rapidly recovered in the SeSCTF treated group relative to the gauze (GZ) and SCTF treated group. Moreover, recovery of re-epithelization, wound contraction and number of blood vessel was observed in SeSCTF treated groups when compared with all other groups. Furthermore, the SeSCTF treated group showed complete recovery of key protein expressions of the downstream signaling pathway of vascular endothelial growth factor (VEGF), angiopoietin-2/1 (Ang-2/1), the signaling pathway of insulin receptors and anti-oxidative status. Overall, the results of this study suggest that SeSCTF accelerates the healing process of cutaneous wounds in STZ-induced diabetic SD rats through stimulation of angiogenesis and the glucose receptor signaling pathway.

  2. Biochemical changes and drug residues in ascidian Halocynthia roretzi after formalin–hydrogen peroxide treatment regimen designed against soft tunic syndrome

    Directory of Open Access Journals (Sweden)

    Ji-Hoon Lee

    2017-07-01

    Full Text Available Abstract Soft tunic syndrome (STS is a protozoal disease caused by Azumiobodo hoyamushi in the edible ascidian Halocynthia roretzi. Previous studies have proven that combined formalin–hydrogen peroxide (H2O2 bath is effective in reducing STS progress and mortality. To secure target animal safety for field applications, toxicity of the treatment needs to be evaluated. Healthy ascidians were bathed for 1 week, 1 h a day at various bathing concentrations. Bathing with 5- and 10-fold optimum concentration caused 100% mortality of ascidians, whereas mortality by 0.5- to 2.0-fold solutions was not different from that of control. Of the oxidative damage parameters, MDA levels did not change after 0.5- and 1.0-fold bathing. However, free radical scavenging ability and reducing power were significantly decreased even with the lower-than-optimal 0.5-fold concentration. Glycogen content tended to increase with 1-fold bathing without statistical significance. All changes induced by the 2-fold bathing were completely or partially restored to control levels 48 h post-bathing. Free amino acid analysis revealed a concentration-dependent decline in aspartic acid and cysteine levels. In contrast, alanine and valine levels increased after the 2-fold bath treatment. These data indicate that the currently established effective disinfectant regimen against the parasitic pathogen is generally safe, and the biochemical changes observed are transient, lasting approximately 48 h at most. Low levels of formalin and H2O2 were detectable 1 h post-bathing; however, the compounds were completely undetectable after 48 h of bathing. Formalin–H2O2 bathing is effective against STS; however, reasonable care is required in the treatment to avoid unwanted toxicity. Drug residues do not present a concern for consumer safety.

  3. Defining chemical species in complex environments using K-edge X-ray absorption spectroscopy: vanadium in intact blood cells and Henze solution from the tunicate Ascidia ceratodes.

    Science.gov (United States)

    Frank, P; Hodgson, K O

    2000-12-25

    A K-edge X-ray absorption spectrum (XAS) fitting approach has been developed to speciate elements of interest in complex materials and used here to model the storage of biological vanadium within whole blood cells from the tunicate Ascidia ceratodes. The response of the K-edge XAS of solution-phase V(III) to increasing c(sulfate) at constant pH 1.8 produced specific and systematic effects in the preedge transition at 5468.8 eV (preedge transitions: 1s-->4A2 at 5464.9 +/- 0.1 eV, 1s-->4T2 at 5466.9 +/- 0.1 eV, and 1s-->4T1 at 5468.8 +/- 0.1 eV for 11 different V(III)/sulfate solutions). In contrast, variations in acidity (as pH) at constant c(sulfate) systematically modified the V(III) preedge XAS at 5466.9 eV. The energy position of the K-edge absorption maximum also serially shifted -0.32 eV/pH unit, from 5483.7 eV (pH 3.0) to 5484.7 eV (pH 0.3). Fits to the V-K XAS of two samples of A. ceratodes whole blood cells representing dozens of animals implied storage of V(III) ions in four predominant solution regimes: approximately 10% high sulfate/pH 0 acid; approximately 40% high sulfate/pH 1.8 acid; approximately 40% moderate sulfate/pH 1.8 acid; approximately 10% moderate sulfate/pH 3 acid. For lysed blood cells, the best fit represented 63% of the V(III) in a pH 1.6 sulfate-free environment and a further 16% in acidic sulfate solution. Nearly 18% of lysed cells vanadium(III) appeared in a tris(catecholate)-like environment. A detailed speciation of biological vanadium complex ions was calculated from these fits by application of the known equilibrium constants governing V(III) and sulfate in acidic aqueous solution. The utility of blood cell V(III) to ascidians is discussed. Fits to K-edge XAS spectra using the XAS spectra of appropriate models are suggested to be generally applicable to elucidating the state of metal ions in a wide variety of complex environments.

  4. Interaction of vanadium and sulfate in blood cells from the tunicate Ascidia ceratodes: Observations using x-ray absorption edge structure and EPR spectroscopies

    Energy Technology Data Exchange (ETDEWEB)

    Frank, P.; Hedman, B.; Hodgson, K.O. [Stanford Univ., CA (United States); Carlson, R.M.K.

    1994-08-17

    Sulfur K-edge X-ray absorption spectroscopy (S-K XAS) and EPR spectroscopy have been used to investigate the inorganic solution chemistry of vanadium, sulfate, and methanesulfonate, with application to blood cells from the tunicate Ascidia ceratodes. Three independent whole blood cell preparations (S85, S86, W87) collected over a period of 18 months were examined. Average blood cell vanadium concentrations were determined to be 0.099, 0.079, and 0.062 M, respectively. All three collections gave sulfur XAS spectra consistent with significant intracellular concentrations of low-valent sulfur, an alkanesulfonic acid, and sulfate. In model studies, the line width of the sulfate K-edge XAS spectrum was found to titrate with both pH and [V(III)]. Application of this finding to A. ceratodes blood cell sulfur XAS spectra provided evidence for direct interactions between endogenous dissolved sulfate and V(III) in two of the three collections. All three collections yielded sulfate XAS edge spectra consistent with low pH. Curve-fitting analysis of the S-K edge XAS spectra for the three whole blood cell collections yielded the ratios of intracellular sulfate:alkane sulfonate:low-valent sulfur to be as follows: S85, 1.0:0.9:0.36;S86, 1.0;0.5;1.5;W87,1.0;0.44:0.24. Comparisons with models indicated that the low-valent blood cell sulfur included various disulfide-like compounds unlike cystine. This all implies a surprisingly rich and variable sulfur biochemistry in these marine organisms. EPR spectroscopy of whole blood cells from one animal from the W87 collection revealed an endogenous VO{sup 2+}-sulfate interaction. Thus both V(III) and VO{sup 2+} can sense an intracellular pool of sulfate, implying the biological colocation of these two metal ions. The variations in blood chemistry observed over time as described herein caution against definitive application of single point experiments.

  5. Sulfur allocation and vanadium-sulfate interactions in whole blood cells from the tunicate Ascidia ceratodes, investigated using X-ray absorption spectroscopy

    Energy Technology Data Exchange (ETDEWEB)

    Frank, P.; Hedman, B.; Hodgson, K.O. [Stanford Univ., CA (United States)

    1999-01-25

    Sulfur K-edge X-ray absorption spectroscopy (XAS) has been used to investigate the distribution of sulfur types in two whole blood cell samples, in selected subcellular blood fractions, and in cell-free plasma from the tunicate Ascidia ceratodes. Whole blood cells are rich in sulfate, aliphatic sulfonate, and l0w-valent sulfur. The sulfur K-edge XAS spectrum of washed blood cell membranes revealed traces of sulfate and low-valent sulfur, but no sulfate ester or sulfonate. Sulfonate is thus exclusively cytosolic. Cell-free blood plasma contains primarily sulfate sulfur. Gaussian fitting and sulfate quantitation for two whole blood cell samples, each representing dozens of individuals from separate collections taken per annum, yielded average sulfur type concentrations for the two populations: (first year, second year): [sulfate], 110 mM, 150 mM; [sulfonate], 99 mM, 70 mM, and; [low-valent sulfur], 41 mM, 220 mM. On titration of sulfate with acid or V(III) in aqueous solution, the strong 2,482.4 eV 1s {r_arrow} (valence t{sub 2}) sulfur K-edge XAS transition of tetrahedral SO{sub 4}{sup 2{minus}} splits into 1s {r_arrow} a{sub 1} and 1s {r_arrow} e transitions, because HSO{sub 4}{sup {minus}} and VSO{sub 4}{sup +} are of C{sub 3v} symmetry. Gaussian fits and appropriate comparisons allow the following assignments: (compound/complex, 1s {r_arrow}a{sub 1} (eV), 1s {r_arrow} e (eV)): myo-inositol hexasulfate, 2,480.8, 2,482.8; HSO{sub 4}{sup {minus}}, 2,481.4, 2,482.7; VSO{sub 4}{sup +}, 2,481.2, 2,482.9. The energy separating the a{sub 1} and e states of complexed sulfate appears to be solvation dependent. From these studies is derived an explicit inorganic spectrochemical model for biological V(III) and sulfate. The average endogenous equilomer concentrations of sulfate complexed with V(III) and/or H{sup +} within the two blood cell samples are calculated from this model. The results provide a natural explanation for the observed biological broadening of A. ceratodes

  6. Combining environmental suitability and population abundances to evaluate the invasive potential of the tunicate Ciona intestinalis along the temperate South American coast

    Directory of Open Access Journals (Sweden)

    Stella M. Januario

    2015-10-01

    Full Text Available The tunicate Ciona intestinalis is an opportunistic invader with high potential for causing economic losses in aquaculture centers. Recent phylogenetic and population genetic analysis support the existence of a genetic complex described as C. intestinalis with two main dominant species (sp A and B occurring worldwide. In Chile, the species has been observed around 30°S of latitude, but no official reports exist for the presence of C. intestinalis in southern regions (above 40°S, where most of the mollusk aquaculture centers are located. Here, we used occurrences from multiple invaded regions and extensive field sampling to model and validate the environmental conditions that allow the species to persist and to find the geographic areas with the most suitable environmental conditions for the spread of C. intestinalis in the Chilean coast. By studying the potential expansion of C. intestinalis southward in the Chilean Coast, we aimed to provide valuable information that might help the development of control plans before the species becomes a significant problem, especially above 40°S. Our results highlight that, by using portions of the habitat that are apparently distinguishable, the species seem to be not only genetically distinct, but ecologically distinct as well. The two regional models fitted for sp A and for sp B showed disagreement on which sections of Chilean coastline are considered more suitable for these species. While the model for sp A identifies moderately to highly suitable areas between 30° and 40°S, the model for sp B classifies the areas around 45°S as the most appropriate. Data from field sampling show a positive linear relationship between density of C. intestinalis and the index of suitability for sp A in aquaculture centers. Understanding the relation of the distinct species with the surrounding environment provided valuable insights about probable routes of dispersion in Chile, especially into those areas considered

  7. Specific characteristics of immunohistochemical changes of the cellular infiltrate (the content of mucins MUC 2, 3, 4 in the mucous tunic of the bronchi in patients with chronic obstructive pulmonary disease

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    S. V. Kovalenko

    2013-04-01

    Full Text Available Introduction. Changes of the mucin expression by the competent cells of the bronchial mucous membrane (MM and dyscrinia are the common evidence of the inflammatory process in case of chronic obstructive pulmonary disease (COPD that logically substantiates the importance for the investigation of the mucin influence on the progression processes of the inflammation in the airways tract (AW. Purpose of the research. A complex study of the immunohistochemical changes of the cellular infiltration according to the mucin content MUC 2, 3, 4 in the mucous membrane of the bronchi at different variants of COPD exacerbation. Materials and Methods. An analysis of 30 case histories of patients with exacerbation of COPD undergoing inpatient treatment at the department of pulmonology was carried out. With the object of determining the degree and character of bronchial inflammation fibrobronchoscopy was carried out in all patients by means of Olympus fibrobronchoscopy. Intravital biopsy of the bronchial MM according to generally accepted technique was performed in connection with a necessity of preserving integrity of antigens in the bronchial structures for immunohistochemical investigations. For the first time an immunohistochemical study of the expression of mucin has been carried out by means of primary monoclonal antibodies to the antigens of proteins MUC-2, MUC-3, MUC-4 in the integumentary epithelium, goblet cells, the epithelium of the mucous glands and the fusiform cells of the stroma of the mucous tunic of the bronchi in patients with chronic obstructive pulmonary disease (COPD during an infectious and noninfectious exacerbation. Results of the research. It has been established that during an exacerbation of chronic obstructive pulmonary disease in different types of epithelial cells of the mucous tunic of the bronchi a decline of the expression of antigens of MUC2 and MUC3 of a various degree of a marked character occurs. Synthesis of MUC 2 and MUC 3

  8. Correction: Dermatan sulfate in tunicate phylogeny: Order-specific sulfation pattern and the effect of [→4IdoA(2-Sulfateβ-1→3GalNAc(4-Sulfateβ-1→] motifs in dermatan sulfate on heparin cofactor II activity

    Directory of Open Access Journals (Sweden)

    Sugahara Kazuyuki

    2011-07-01

    Full Text Available Abstract After the publication of the work entitled "Dermatan sulfate in tunicate phylogeny: Order-specific sulfation pattern and the effect of [→4IdoA(2-Sulfateβ-1→3GalNAc(4-Sulfateβ-1→] motifs in dermatan sulfate on heparin cofactor II activity", by Kozlowski et al., BMC Biochemistry 2011, 12:29, we found that the legends to Figures 2 to 5 contain serious mistakes that compromise the comprehension of the work. This correction article contains the correct text of the legends to Figures 2 to 5.

  9. New Bioactive Alkyl Sulfates from Mediterranean Tunicates

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    Marialuisa Menna

    2012-10-01

    Full Text Available Chemical investigation of two species of marine ascidians, Aplidium elegans and Ciona edwardsii, collected in Mediterranean area, led to isolation of a series of alkyl sulfates (compounds 1–5 including three new molecules 1–3. Structures of the new metabolites have been elucidated by spectroscopic analysis. Based on previously reported cytotoxic activity of these type of molecules, compounds 1–3 have been tested for their effects on the growth of two cell lines, J774A.1 (BALB/c murine macrophages and C6 (rat glioma in vitro. Compounds 1 and 2 induced selective concentration-dependent mortality on J774A.1 cells.

  10. Redescription of Corallobothrium solidum (Cestoda: Proteocephalidea) and erection of a new genus, Essexiella, for tapeworms from channel catfish (Ictaluridae)

    Czech Academy of Sciences Publication Activity Database

    Scholz, Tomáš; de Chambrier, A.; Mariaux, J.; Kuchta, Roman

    2011-01-01

    Roč. 97, č. 6 (2011), 1142–1151 ISSN 0022-3395 R&D Projects: GA ČR GA524/04/0342; GA ČR GA524/08/0885; GA AV ČR KJB600960902; GA MŠk LC522 Institutional research plan: CEZ:AV0Z60220518 Keywords : MALAPTERURUS-ELECTRICUS * PARASITE * SILURIFORMES * Eucestoda * MONTICELLIIDAE * FRITSCH * FISHES * MORPHOLOGY Subject RIV: GJ - Animal Vermins ; Diseases, Veterinary Medicine Impact factor: 1.405, year: 2011

  11. Ecología trófica de los ostreros Haematopus palliatus pitanay (Murphy 1925 y Haematopus ater (Vieillot et Oudart 1825 en mantos del tunicado Pyura praeputialis (Heller 1878 en la Bahía de Antofagasta, Chile Trophic ecology of the oystercatchers Haematopus palliatus pitanay (Murphy 1925 and Haematopus ater (Vieillot et Oudart 1825 on beds of the tunicate Pyura praeputialis (Heller 1878 in the Bay of Antofagasta, Chile

    Directory of Open Access Journals (Sweden)

    CRISTIAN J. PACHECO

    2000-09-01

    Full Text Available En Antofagasta, norte de Chile, coexisten dos especies de ostreros: Haematopus palliatus pitanay (ostrero blanco y Haematopus ater (ostrero negro. Ambas especies depredan en un sistema rocoso intermareal peculiar cuya franja media se encuentra dominada por el tunicado Pyura praeputialis (= Pyura stolonifera bradleyi; Kott 1997. En la literatura se discute sobre las diferencias morfológicas del pico (largo y ancho entre ambos tipos de ostreros. Dichas diferencias podrían segregar los roles de forrajeo de estas aves cuando comparten un mismo hábitat: los ostreros blancos atacarían preferentemente a presas de textura "blanda" y los ostreros negros atacarían presas de textura "dura" (i.e. cobertura calcárea. En este trabajo se consideró a P. praeputialis (piure de Antofagasta como una presa de textura "blanda", ya que su tunica, compuesta por tunicina, es suave y flexible. En el estudio se comparan diversos aspectos ecológicos entre ambas especies de ostrero tales como: (a abundancia de ostreros y de otras aves costeras que depredan sobre P. praeputialis, (b distribución espacial de los ostreros en el manto de piure durante sus actividades de depredación, (c tallas de piures preferidos, (d tiempos de manipulación, (e tasa de consumo y (f frecuencia de consumo de otros invertebrados distintos del piure. Los resultados señalan a H. palliatus pitanay como la especie de ostrero que ataca con mayor frecuencia a P. praeputialis. Por otra parte, H. ater ataca con mayor frecuencia presas de textura "dura" como: lapas, caracoles, choritos, erizosAt Antofagasta, northern Chile, two oystercatcher species coexist: the white oystercatcher, Haematopus palliatus pitanay and the black oystercatcher H. ater. Both species forage on an intertidal system where the middle fringe is dominated by the tunicate Pyura praeputialis (= Pyura stolonifera bradleyi; Kott 1997. According to the literature, differences in the morphology of their bills (length and width

  12. Habitat Mapping Cruise - Tunicates (HB0806, EK60)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Objectives: Use otter trawls (if available), beam trawls (if not), Naturalist Dredge, SEABOSS photography/bottom grab equipment, CTDs, and large (10-30 liter) Niskin...

  13. Cell lineages and fate maps in tunicates: conservation and modification.

    Science.gov (United States)

    Nishida, Hiroki; Stach, Thomas

    2014-10-01

    Comparison of features of the cell lineages and fate maps of early embryos between related species is useful in inferring developmental mechanisms and amenable to evolutionary considerations. We present cleavage patterns, cell lineage trees, and fate maps of ascidian and appendicularian embryos side by side to facilitate comparison. This revealed a number of significant differences in cleavage patterns and cell lineage trees, whereas the fate maps were found to be conserved. This fate map similarity can be extended to vertebrates, thus representing the fate map characteristics of chordates. Cleavage patterns and cell lineages may have been modified during evolution without any drastic changes in fate maps. Selective pressures that constrain developmental mechanisms at early embryonic stages might not be so strong as long as embryos are still able to generate a chordate-type fate map. Aquatic chordates share similar fate maps and morphogenetic movements during gastrulation and neurulation, eventually developing into tadpole-shaped larvae. As swimming by tail beats, and not by cilia, is advantageous, selective pressure may maintain the basic elements of the tadpole shape. We also discuss the evolutionary origin of the vertebrate neural crest and the embryonic origin of the appendicularian heart to illustrate the usefulness of cell lineage data. From an evolutionary standpoint, cell lineages behave like other characteristics such as morphology or protein sequences. Both novel and primitive features are present in extant organisms, and it is of interest to identify the relative degree of evolutionary conservation as well as the level at which homology is inferred.

  14. Tunical vaginalis excision: the hydrocelectomy technique not to be ...

    African Journals Online (AJOL)

    Background: The technique of excising the hydrocele sac (tunica vaginalis) rather extensively, leaving only 1- 2 cm rim of tissue adjacent to the testis and epididymis in the treatment of hydrocele in adults is to be advocated, as it gives the same result as Jaboulay's technique. The advantage with this technique is that, ...

  15. Dermatan sulfate in tunicate phylogeny: Order-specific sulfation pattern and the effect of [→4IdoA(2-Sulfateβ-1→3GalNAc(4-Sulfateβ-1→] motifs in dermatan sulfate on heparin cofactor II activity

    Directory of Open Access Journals (Sweden)

    Sugahara Kazuyuki

    2011-05-01

    Full Text Available Abstract Background Previously, we have reported the presence of highly sulfated dermatans in solitary ascidians from the orders Phlebobranchia (Phallusia nigra and Stolidobranchia (Halocynthia pyriformis and Styela plicata. Despite the identical disaccharide backbone, consisting of [→4IdoA(2Sβ-1→3GalNAcβ-1→], those polymers differ in the position of sulfation on the N-Acetyl galactosamine, which can occur at carbon 4 or 6. We have shown that position rather than degree of sulfation is important for heparin cofactor II activity. As a consequence, 2,4- and 2,6-sulfated dermatans have high and low heparin cofactor II activities, respectively. In the present study we extended the disaccharide analysis of ascidian dermatan sulfates to additional species of the orders Stolidobranchia (Herdmania pallida, Halocynthia roretzi and Phlebobranchia (Ciona intestinalis, aiming to investigate how sulfation evolved within Tunicata. In addition, we analysed how heparin cofactor II activity responds to dermatan sulfates containing different proportions of 2,6- or 2,4-disulfated units. Results Disaccharide analyses indicated a high content of disulfated disaccharide units in the dermatan sulfates from both orders. However, the degree of sulfation decreased from Stolidobranchia to Phlebobranchia. While 76% of the disaccharide units in dermatan sulfates from stolidobranch ascidians are disulfated, 53% of disulfated disaccharides are found in dermatan sulfates from phlebobranch ascidians. Besides this notable difference in the sulfation degree, dermatan sulfates from phlebobranch ascidians contain mainly 2,6-sulfated disaccharides whereas dermatan sulfate from the stolidobranch ascidians contain mostly 2,4-sulfated disaccharides, suggesting that the biosynthesis of dermatan sulfates might be differently regulated during tunicates evolution. Changes in the position of sulfation on N-acetylgalactosamine in the disaccharide [→4IdoA(2-Sulfateβ-1→3GalNAcβ-1

  16. Diversidad y biomasa de macro-invertebrados en matrices intermareales del tunicado Pyura praeputialis (Heller, 1878 en la Bahía de Antofagasta, Chile Diversity and biomass of macro-invertebrates in intertidal matrices of the tunicate Pyura praeputialis (Heller, 1878 in the Bay of Antofagasta, Chile

    Directory of Open Access Journals (Sweden)

    MAURICIO CERDA

    2001-12-01

    . Three sites were studied inside the Bay: one located approximately at the center P. praeputialis geographical distribution in the bay and two around the north and south limits respectively (ecotones. The crevices and interstices between individuals in the dense matrices of P. praeputialis provide bio-habitat, such as those described for ecosystem-engineer species. A total of 96 taxa of macro-invertebrates (gama diversity, corresponding to nine phyla, associated to P. praeputialis matrices were recorded. The richer taxa were: gastropod (28 %, polychaeta (26 %, decapod (15 % and bivalve (14 %. The mean biomass of invertebrate registered was of 246,40 g m-2. The paper discusses the elevated diversity of macro-invertebrates recorded in the Antofagasta´s P. praeputialis matrices, the observed patterns along the geographical distribution inside the bay and the role of this tunicate as a bio-engineer species. The results are compared with a similar study on P. stolonifera carried out in Natal, South Africa and with respect to the diversity of macro-invertebrate associated to other bio-engineer species

  17. Ultrastructural characters of the spermatozoon of the cestode Corallobothrium solidum Fritsch, 1886 (Cestoda: Proteocephalidea), a parasite of the electric catfish Malapterurus electricus

    Czech Academy of Sciences Publication Activity Database

    Bruňanská, Magdaléna; Scholz, Tomáš; Ibraheem, M. H.

    2004-01-01

    Roč. 94, č. 6 (2004), s. 421-426 ISSN 0932-0113 R&D Projects: GA ČR GA524/04/0342; GA ČR GA206/03/1317 Grant - others:GA SR(SK) VEGA2/4177/04 Institutional research plan: CEZ:AV0Z6022909 Keywords : Cestoda * Proteocephalidea * spermatozoon Subject RIV: GJ - Animal Vermins ; Diseases, Veterinary Medicine Impact factor: 1.060, year: 2004

  18. Cyanobacterial diversity and a new acaryochloris-like symbiont from Bahamian sea-squirts.

    Directory of Open Access Journals (Sweden)

    Susanna López-Legentil

    Full Text Available Symbiotic interactions between ascidians (sea-squirts and microbes are poorly understood. Here we characterized the cyanobacteria in the tissues of 8 distinct didemnid taxa from shallow-water marine habitats in the Bahamas Islands by sequencing a fragment of the cyanobacterial 16S rRNA gene and the entire 16S-23S rRNA internal transcribed spacer region (ITS and by examining symbiont morphology with transmission electron (TEM and confocal microscopy (CM. As described previously for other species, Trididemnum spp. mostly contained symbionts associated with the Prochloron-Synechocystis group. However, sequence analysis of the symbionts in Lissoclinum revealed two unique clades. The first contained a novel cyanobacterial clade, while the second clade was closely associated with Acaryochloris marina. CM revealed the presence of chlorophyll d (chl d and phycobiliproteins (PBPs within these symbiont cells, as is characteristic of Acaryochloris species. The presence of symbionts was also observed by TEM inside the tunic of both the adult and larvae of L. fragile, indicating vertical transmission to progeny. Based on molecular phylogenetic and microscopic analyses, Candidatus Acaryochloris bahamiensis nov. sp. is proposed for this symbiotic cyanobacterium. Our results support the hypothesis that photosymbiont communities in ascidians are structured by host phylogeny, but in some cases, also by sampling location.

  19. Electrochemiluminescence from Tunicate, Tunichrome--Metal Complexes and Other Biological Samples (Postprint)

    Science.gov (United States)

    1996-05-17

    ascidian, Ascidia ceratodes. Comp Biochem Physiol 1991;99A:585-92. 26. Roman AD, Molina J, Rivera L. Inorganic aspects of the blood chemistry of...ascidians, ionic composition, and Ti, V, Fe in the blood plasma of Pyura chilensis and Ascidia dispar. Bioi Bull 1988; 175:154-66. 27. Rosas I, BaezA

  20. Looking at both sides of the invasion: patterns of colonization in the violet tunicate Botrylloides violaceus.

    Science.gov (United States)

    Bock, D G; Zhan, A; Lejeusne, C; MacIsaac, H J; Cristescu, M E

    2011-02-01

    Understanding the ecological and evolutionary forces that shape the genetic structure of invasive populations and facilitate their expansion across a large spectrum of environments is critical for the prediction of spread and management of ongoing invasions. Here, we study the dynamics of postestablishment colonization in the colonial ascidian Botrylloides violaceus, a notorious marine invader. After its initial introduction from the Northwest Pacific, B. violaceus spread rapidly along the Pacific and Atlantic coasts of North America, impacting both aquaculture facilities and natural ecosystems. We compare genetic diversity and patterns of gene flow among 25 populations (N=679) from the West and East coasts, and evaluate the contribution of sexual vs. asexual reproduction to this species' invasion success using data from the mitochondrial cytochrome c oxidase subunit I (COI) gene and 13 nuclear polymorphic microsatellite loci. Our results reveal contrasting patterns of spread in the coastal waters of North America. While the West coast was colonized by noncontiguous (long-distance) dispersal, the East coast invasion appears to have occurred through contiguous (stepping-stone) spread. Molecular data further indicate that although dispersal in colonial ascidians is predominantly achieved through sexually produced propagules, aquaculture practices such as high-pressure washing can facilitate fragmentation and potentially exacerbate infestations and spread via asexual propagules. The results presented here suggest that caution should be used against the general assumption that all invasions, even within a single species, exhibit similar patterns of colonization, as highly contrasting dynamics may transpire in different invaded ranges. © 2010 Blackwell Publishing Ltd.

  1. Form, Function and Flow in the Plankton: Jet Propulsion and Filtration by Pelagic Tunicates

    Science.gov (United States)

    2010-02-01

    1998). Each individual broods a single embryo, or in a few species several embryos, which becomes a solitary budding individual. Salps are most...insect wing 14 and a bird wing) can be explained by the tendency of systems to evolve in such a way that flow through the system is optimized and...behavior. Limnol. Oceanogr. 20, 907-917. Harbison, G. R. (1998). The parasites and predators of Thaliacea. In: Bone Q (ed) The biology of pelagic

  2. Antiproliferative effect of dehydrodidemnin B (DDB), a depsipeptide isolated from Mediterranean tunicates.

    Science.gov (United States)

    Urdiales, J L; Morata, P; Núñez De Castro, I; Sánchez-Jiménez, F

    1996-04-19

    The biological effects of dehydrodidemnin B(DDB), a novel depsipeptide isolated from Aplidium albicans, were studied on Ehrlich carcinoma growing in vivo and in primary cultures, and compared with those reported for Didemnin B (DB). Daily administration of DB or DDB (2.5 micrograms/mouse) almost duplicated the animal life-span and total number of tumour cells decreased by 70-90%. Results suggest a major effect of DDB when administered in the lag phase of growth. DDB behaved as a very potent inhibitor of protein synthesis; consequently, ornithine decarboxylase activity (ODC, EC 4.1.1.17) is drastically reduced by DDB-treatment.

  3. ANP (Atrial Natriuretic Peptide presence in the heart of a tunicate, Ciona intestinalis.

    Directory of Open Access Journals (Sweden)

    Aldo Gerbino

    2010-06-01

    Full Text Available Atrial natriuretic peptide was found in the heart of vertebrates, we studied the ANP presence in the heart of Ciona intestinalis. This is animal is very important because of the its evolutionary position between invertebrates and vertebrates. ANP presence was only revealed in myoepithelial cells of the myocardium. Results suggest the hypothesis that ANP is present not only in the vertebrates but also in the invertebrates and in Ciona heart ANP might play a similar role like in the heart of vertebrates.

  4. Phallusiasterol C, A New Disulfated Steroid from the Mediterranean Tunicate Phallusia fumigata

    Directory of Open Access Journals (Sweden)

    Concetta Imperatore

    2016-06-01

    Full Text Available A new sulfated sterol, phallusiasterol C (1, has been isolated from the Mediterranean ascidian Phallusia fumigata and its structure has been determined on the basis of extensive spectroscopic (mainly 2D NMR analysis. The possible role in regulating the pregnane X receptor (PXR activity of phallusiasterol C has been investigated; although the new sterol resulted inactive, this study adds more items to the knowledge of the structure-PXR regulating activity relationships in the case of sulfated steroids.

  5. An unanswered question in pediatric urology: the post pubertal persistence of prepubertal congenital penile curvature correction by tunical plication

    Directory of Open Access Journals (Sweden)

    Ünsal Ozkuvanci

    Full Text Available ABSTRACT Objective: The aim of this study is to analyze post pubertal results of pre pubertal tunica albuginea plication with non-absorbable sutures in the correction of CPC. Materials and Methods: The files of patients who underwent tunica albuginea plication without incision (dorsal/lateral were retrospectively reviewed. Patients younger than 13 years of age at the time of operation and older than 14 years of age in November 2015 were included. Patients with a penile curvature of less than 30 degrees & more than 45 degrees and penile/urethral anomalies were excluded. All of the patients underwent surgery followed by circumcision. Results: The mean age of patients at the time of the operation was 9.7 years (range, 6-13 years. The mean degree of ventral penile curvature measured during the operation was 39 degrees while it was 41 degrees in the lateral curvatures. All of the patients were curvature-free at the end of the operation. At the time of the follow-up examination, the mean age was 16.7 years (range, 14-25 years. Six patients had a straight (0-10 degrees penis during erection and seven patients had recurrent penile curvatures ranging from 30 to 50 degrees. Conclusion: Pre pubertal tunica albuginea plication of congenital penile curvature (30-45 degrees with non-absorbable sutures performed without incision is a minimal invasive method especially when performed during circumcision. However, recurrence might be observed in half of the patients after puberty.

  6. Conservation and divergence of chemical defense system in the tunicate Oikopleura dioica revealed by genome wide response to two xenobiotics

    Directory of Open Access Journals (Sweden)

    Yadetie Fekadu

    2012-02-01

    Full Text Available Abstract Background Animals have developed extensive mechanisms of response to xenobiotic chemical attacks. Although recent genome surveys have suggested a broad conservation of the chemical defensome across metazoans, global gene expression responses to xenobiotics have not been well investigated in most invertebrates. Here, we performed genome survey for key defensome genes in Oikopleura dioica genome, and explored genome-wide gene expression using high density tiling arrays with over 2 million probes, in response to two model xenobiotic chemicals - the carcinogenic polycyclic aromatic hydrocarbon benzo[a]pyrene (BaP the pharmaceutical compound Clofibrate (Clo. Results Oikopleura genome surveys for key genes of the chemical defensome suggested a reduced repertoire. Not more than 23 cytochrome P450 (CYP genes could be identified, and neither CYP1 family genes nor their transcriptional activator AhR was detected. These two genes were present in deuterostome ancestors. As in vertebrates, the genotoxic compound BaP induced xenobiotic biotransformation and oxidative stress responsive genes. Notable exceptions were genes of the aryl hydrocarbon receptor (AhR signaling pathway. Clo also affected the expression of many biotransformation genes and markedly repressed genes involved in energy metabolism and muscle contraction pathways. Conclusions Oikopleura has the smallest number of CYP genes among sequenced animal genomes and lacks the AhR signaling pathway. However it appears to have basic xenobiotic inducible biotransformation genes such as a conserved genotoxic stress response gene set. Our genome survey and expression study does not support a role of AhR signaling pathway in the chemical defense of metazoans prior to the emergence of vertebrates.

  7. Fouling Settlement at HMAS Stirling (Cockburn Sound, Western Australia) - A Review,

    Science.gov (United States)

    1986-05-01

    zAku (Chorata, Ascidiacea) *Trididemnum sp. *Unid. colonial spp.% X Ascidia aspersa (Muller)%% Microcosmus claudicans Savigny Corellid sp.% Molgula...batemani Kott% Styela Irma (Hartmeyer) Botrylloides leachii ( savigny ) Symplegma viride Herdmann % 5.1 4. #P23 - - - . . .-- ~-.-- i I,I I’. h d.. S I / _ -- V IA 1% -a. -p ’sq.. I. ~ 1~ ~ p *,.

  8. Effects of wheat germ agglutinin on tunicate egg activation and fertilization: is there a plasma membrane sperm receptor system on Ascidia ceratodes eggs?

    Science.gov (United States)

    Flannery, B; Epel, D

    1998-06-01

    Little work has been carried out on the sperm recognition systems present on the egg plasma membrane. Here it is shown that wheat germ agglutinin (WGA) interferes with the sperm-interacting system on the plasma membrane of eggs of the ascidian, Ascidia ceratodes. The WGA activates the dechorionated egg, indicating that a plasma membrane sugar residue can be directly tied to egg activation. Low concentrations of this lectin do not activate the eggs, but reduce fertilizability. This observation suggests that the WGA binding site might be part of a sperm reception-activation complex in the plasma membrane. While WGA also affects sperm binding to the chorion, the mechanisms of sperm interaction at the plasma membrane and chorion show different sensitivities to lectins, sugars and enzymes.

  9. Further textile artefacts from the Royal Crypt at Prague Castle (CZ). A tablet-woven silk band and fragments of a child's funeral tunic

    Czech Academy of Sciences Publication Activity Database

    Bravermanová, M.; Březinová, Helena

    2015-01-01

    Roč. 2015, č. 57 (2015), s. 104-110 ISSN 2245-7135 R&D Projects: GA ČR(CZ) GA14-06451S Institutional support: RVO:67985912 Keywords : Royal Crypt * Anna Falcká * tablet -weaving * archaeological textile Subject RIV: AC - Archeology, Anthropology, Ethnology

  10. Distribution of a pelagic tunicate, Salpa fusiformis in warm surface current of the eastern Korean waters and its impingement on cooling water intakes of Uljin nuclear power plant.

    Science.gov (United States)

    Chae, Jinho; Choi, Hyun Woo; Lee, Woo Jin; Kim, Dongsung; Lee, Jae Hac

    2008-07-01

    Impingement of a large amount of gelatinous plankton, Salpa fusiformis on the seawater intake system-screens in a nuclear power plant at Uljin was firstly recorded on 18th June 2003. Whole amount of the clogged animals was estimated were presumptively at 295 tons and the shortage of cooling seawater supply by the animal clogging caused 38% of decrease in generation capability of the power plant. Zooplankton collection with a multiple towing net during the day and at night from 5 to 6 June 2003 included various gelatinous zooplanktons known to be warm water species such as salps and siphonophores. Comparatively larger species, Salpa fusiformis occupied 25.4% in individual density among the gelatinous plankton and showed surface distribution in the depth shallower than thermocline, performing little diel vertical migration. Temperature, salinity and satellite data also showed warm surface current predominated over the southern coastal region near the power plant in June. The results suggested that warm surface current occasionally extended into the neritic region may transfer S. fusiformis, to the waters off the power plant. The environmental factors and their relation to ecobiology of the large quantity of salpa population that are being sucked into the intake channel of the power plant are discussed.

  11. Cooperative Security in the Pacific Basin. The 1988 Pacific Symposium,

    Science.gov (United States)

    1990-01-01

    region. They are of the region, not distant JAPAN-ROK SECURITY COOPERATION 75 friends as is the United States. Should US interests in the region be...discussion of these early, unsuccessful efforts at Southeast Asian regionalism, see Estrella Solidum, Towards a Southeast Asian Community (Quezon City...allies and friends in this part of the world." The political reality is the tendency of the United States to isolate itself from events in distant

  12. Variabilidad genética y estructura poblacional del tunicado Pyura chilensis Molina, 1782, en la costa de Chile Genetic variability and population structure in tunicate Pyura chilensis Molina, 1782, in the coast of Chile

    Directory of Open Access Journals (Sweden)

    MARCELA P ASTORGA

    2006-12-01

    Full Text Available El tunicado Pyura chilensis se ha considerado una especie de importancia ecológica, por concentrar una gran diversidad biológica en sus agregaciones y de importancia económica por ser un recurso de extracción por pescadores artesanales. Sin embargo, se han detectado cambios en la distribución y abundancia de sus poblaciones adjudicados a su sobreexplotación. Para llegar a establecer medidas de conservación de un recurso, es necesario entre otras cosas, conocer su variabilidad genética y su estructura poblacional, estimando los patrones y sus causas. Por lo tanto, en el presente trabajo se determinó el grado de variabilidad genética aloenzimática del piure P. chilensis y su estructura poblacional en base a tres localidades (Antofagasta, Talcahuano y Puerto Montt en la costa chilena. Los loci polimórficos obtenidos fueron Mdh-1 y Pgi-1. Los valores de Fst mostraron leve estructuración poblacional entre localidades (Fst 0,019 al igual que la prueba exacta de diferenciación genética (P = 0,031. Se observó diferenciación para la localidad de Puerto Montt en relación a las otras dos localidades en algunos de los dos loci. Los niveles de variabilidad observados en esta especie corresponden a lo esperados para otras ascidias. La estructuración genética poblacional puede ser explicada por una combinación de diferentes factores, entre los que destacan: (i el tiempo del periodo larval de 12 a 24 h, lo cual no facilitaría una amplia dispersión a lo largo de 2.500 km de costa y (ii las condiciones oceanográficas diferenciales entre localidades, junto a patrones de circulación cerrados que podrían llegar a restringir el flujo génico. Por último, proponemos que un conocimiento adecuado del grado de variabilidad, estructura y dinámica genética de las poblaciones son aspectos esenciales para tomar medidas de conservación de recursos explotados, tanto en ambientes abiertos como en áreas de manejoThe ascidian Pyura chilensis is an ecologically important species due to its aggregates, providing habitat for other species. In addition, it is an economically important species being commercially exploited along the coast of Chile. Here, changes in distribution and abundance have been observed during the last decade that have been linked to overfishing. Patterns of genetic variation and population structure are important to understand biodiversity, management and conservation of species. Thus, the main objective of this study was to determine the genetic variability and population structure of Pyura chilensis in three localities along the Chilean coast (Antofagasta, Talcahuano, Puerto Montt. The polymorphic loci obtained were: Mdh-1 and Gpi-1 for P. chilensis. The Fst values showed slight population structure (Fst = 0.019, and the genetic differentiation showed statistically significant values (P = 0.031. The Puerto Montt locality was significantly different from the other two sites in the pairwise comparison in some loci. The genetic differentiation among localities of P. chilensis could be explained by a combination of different causes: (i low larval dispersion capacity associated to the larval life time of this species (12 to 24 h, and (ii differences in oceanographic conditions between localities and a closed circulation pattern that restrict dispersion. We conclude that monitoring of genetic diversity levels are essential to establish conservation and management plans of exploited marine resources

  13. Use of autologous grafts in the treatment of acquired penile curvature: An experience of 33 cases

    Directory of Open Access Journals (Sweden)

    Abdul Rouf Khawaja

    2016-01-01

    Conclusion: Tunical lengthening procedures by autologous free grafts represents a safe and reproducible technique. A good preoperative erectile function is required for tunical lengthening procedure. Temporalis fascia graft is thin, tough membrane and effective graft for PD with good cosmetic and functional results.

  14. Variación fenotípica y genética en el tunicado Pyura praeputialis (Heller, 1878 en el área norte de la Bahía de Antofagasta, Chile Phenotypic and genetic variation in tunicate Pyura praeputialis (Heller, 1878 in the northern sac of the Antofagasta Bay

    Directory of Open Access Journals (Sweden)

    MARCELA ASTORGA

    2002-09-01

    Full Text Available La morfología de los "piures" (Urochordata: Tunicata es altamente variable, mostrando diferencias hábitat-específicas con una base intra- o interespecífica, lo cual dificulta la comprensión de sus significados taxonómicos, ecológicos y evolutivos. En el presente trabajo se caracterizó genéticamente, mediante polimorfismos de isoenzimas, a tres morfotipos de piures: achatados, intermedios y alargados, observados en poblaciones intermareales del "piure de Antofagasta" Pyura praeputialis. El estudio se realizó en tres localidades que se distribuyen en un gradiente de exposición al oleaje en el extremo norte de la Bahía de Antofagasta, Chile. Se analizó un total de 17 loci isoenzimáticos, a través de electroforesis en gel de almidón, de los cuales tres fueron polimórficos: IDH-1, MDH-1 y PGM-1. Los resultados sugieren diferencias morfológicas pero no genéticas entre los morfotipos. Sin embargo, las localidades difieren significativamente en su estructura genética. Se compara los resultados en relación a las respuestas observadas para morfotipos semejantes en Australia, sobre la base de que P. praeputialis habría colonizado recientemente la Bahía de Antofagasta. Se concluye que las diferencias entre los morfotipos en Antofagasta tienen una base intraespecífica y en Australia interespecífica y se discute las hipótesis que podrían explicar las diferencias genéticas y fenotípicas observadasThe morphology of "sea squirts" (Urochordata: Tunicata is highly variable and is expressed in habitat-specific differences intra- and interspecific variation pattern that had hindered the interpretation of such differences as well as their taxonomical, ecological or evolutionary meaning. Here we describe the population genetic structure of three morphotypes (squat, intermediate and tall "sea squirt" observed in populations of the "piure de Antofagasta", Pyura praeputialis by enzyme electrophoresis. The study was carried out in three localities in the northern sac of the Bay of Antofagasta, Chile, and distributed along a wave exposure gradient. A total of 17 enzymatic loci were assayed by horizontal starch-gel electrophoresis, three of which (IDH-1, MDH-1 and PGM-1 were polymorphic. The results showed significant genetic differences among localities, but not among morphotypes. These results are contrasted with similar studies conducted on the same species in Australia, on the base that P. praeputialis has recently colonized Antofagasta from Australia. It is suggested that the differences among the morphotypes from Antofagasta are intraspecifics and those from Australia are interspecifics. The possible explanations for the genetic and morphological differences among localities are discussed

  15. Zooplankton biomass and composition in the western Bay of Bengal during late sw monsoon

    Digital Repository Service at National Institute of Oceanography (India)

    Achuthankutty, C.T.; Madhupratap, M.; Nair, V.R.; Nair, S.R.S.; Rao, T.S.S.

    Copepoda formed the predominant group except in the southern region where a swarm of pelagic tunicates reduced their contribution to only 19% of the total zooplankton count. Decapod larvae occurred in fairly large numbers all along the coastal...

  16. Biogeochemistry and ecology of Pyrosoma spinosum from the Central Arabian Sea

    Digital Repository Service at National Institute of Oceanography (India)

    Gauns, M.; Mochemadkar, S.; Pratihary, A.K.; Roy, R.; Naqvi, S.W.A.

    Background: A swarm of pelagic tunicate (Pyrosoma spinosum) was found in the surface open waters of the Arabian Sea during late southwest monsoon (September 2007). The swarm site was characterized by moderate southwesterly wind (approximately 7 m s...

  17. Zooplankton biomass & composition in the Western Bay of Bengal during late SW monsoon; 15 August 1978 to 07 September 1978 (NODC Accession 0000941)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Copepoda formed the predominant group except in the southern region where a swarm of pelagic tunicates reduced their contribution to only 19% of the total...

  18. Ascidians from Rocas Atoll, northeast Brazil

    Directory of Open Access Journals (Sweden)

    Sandra Vieira Paiva

    2015-06-01

    Full Text Available Rocas Atoll is the only one of its kind in the South Atlantic—and the first Brazilian marine biological reserve. This is the first report about the ascidians from Rocas. A total of 12 species were found, 5 of them not hitherto described: Ascidia viridina sp. nov., Didemnum rochai sp. nov., Leptoclinides crocotulus sp. nov., Polysyncraton maurizeliae sp. nov., and Trididemnum rocasensis sp. nov.. One Caribbean species, Didemnum halimedae, was also discovered in the region for the first time. Further, this is the first record of Didemnum digestum in the Atlantic. The results indicate a high degree of endemism in the ascidian fauna from Rocas Atoll, where didemnids are presently the most important members.

  19. Rocky Intertidal Zonation Pattern in Antofagasta, Chile: Invasive Species and Shellfish Gathering

    Science.gov (United States)

    Castilla, Juan Carlos; Manríquez, Patricio H.; Delgado, Alejandro; Ortiz, Verónica; Jara, María Elisa; Varas, Manuel

    2014-01-01

    Background Biological invasions affecting rocky intertidal zonation patterns, yield information on species interactions. In the Bay of Antofagasta, northern Chile, the non-indigenous tunicate Pyura praeputialis, originally from Australia, has invaded (in the past century or so) and monopolized a major portion of the mid-intertidal rocky shore, displacing upshore the native mussel Perumytilus purpuratus. In Antofagasta the tunicate is subjected to intensive exploitation. Monitoring protocols show that in the past 10 years Antofagasta's tunicate population has experienced a drastic decline, affecting the intertidal zonation pattern. Methodology/Principal Findings A 12.5 km of coastline, on the southern eastern shore of the Bay of Antofagasta, was studied. Eight sites were systematically (1993–1994) or sporadically (2003–2014) monitored for the seaward-shoreward expansion or reduction of the tunicate Pyura praeputialis, and native mussel and barnacle bands. A notable reduction in the mid-intertidal band of P. praeputialis and a seaward expansion of the mussel, Perumytilus purpuratus, and barnacle bands was observed. We suggest that the major cause for the decline in the tunicate is due to its intensive exploitation by rocky shore Pyura-gathers. The rate of extraction of tunicates by professional Pyura-gathers ranged between 256–740 tunicates hour−1. Between 2009–2014 the density of professional Pyura-gather ranged between 0.5–4.5 km−1 per low tide. Hence, 10 professional Pyura-gathers working 1 h for 10 low tides per month, during 6 months, will remove between 307–888 m2 of tunicates. A drastic decline in tunicate recruitment was observed and several P. praeputialis ecosystems services have been lost. Conclusion and Significance In Antofagasta, the continuous and intensive intertidal gathering of the invasive tunicate Pyura praeputialis, has caused a drastic reduction of its population modifying the zonation pattern. Thereby, native mussel Perumytilus

  20. Penile Corporeal Reconstruction during Difficult Placement of a Penile Prosthesis

    Directory of Open Access Journals (Sweden)

    Viet Q. Tran

    2008-01-01

    Full Text Available For some patients with impotence and concomitant severe tunical/corporeal tissue fibrosis, insertion of a penile prosthesis is the only option to restore erectile function. Closing the tunica over an inflatable penile prosthesis in these patients can be challenging. We review our previous study which included 15 patients with severe corporeal or tunical fibrosis who underwent corporeal reconstruction with autologous rectus fascia to allow placement of an inflatable penile prosthesis. At a mean follow-up of 18 months (range 12 to 64, all patients had a prosthesis that was functioning properly without evidence of separation, herniation, or erosion of the graft. Sexual activity resumed at a mean time of 9 weeks (range 8 to 10. There were no adverse events related to the graft or its harvest. Use of rectus fascia graft for coverage of a tunical defect during a difficult penile prosthesis placement is surgically feasible, safe, and efficacious.

  1. EFFECTIVENESS OF SECRETOLYTIC THERAPY IN REHABILITATION PROGRAM IN FREQUENTLY AILING CHILDREN

    Directory of Open Access Journals (Sweden)

    V.V. Kiselev

    2008-01-01

    Full Text Available A problem of rehabilitation of frequently ailing children (FAC is one of the actual problems in pediatrics. Disorders of mucosal immunity, depending on different factors including the state of mucociliary transport, play important role in formation of FAC group including patients with recurrent episodes of obstructive bronchitis. Morphological and functional unity of mucous tunic of respiratory tract allows determining the state of mucociliary clearance and effectiveness of secretolytic therapy by the state of mucosal tunic of nose and nasopharynx (it is the most accessible mucosal tunic for the objective examination. Specified rates of time of mucociliary transport in different groups of FAC are presented in this article. An effectiveness of mucoregulatory medication ambroxol in complex treatment of FAC with adenoids and recurrent episodes of obstructive bronchitis, and advisability of its prolonged (14–18 days use for the recovery of disturbed system of mucociliary transport were described in this article.Key words: frequently ailing children, somatotype, mucociliary clearance, treatment.

  2. Novel biological sources of electrochemiluminescence and potential applications to metals detection

    Science.gov (United States)

    Bruno, John G.; Collard, Sneed B.; Kuch, David J.; Cornette, Jimmy C.

    1996-11-01

    Electrochemiluminescence (ECL) is an electrochemical means of generating light from certain organic-metal complexes (e.g., Cr, Os, or Ru with bipyridine) and other types of molecules. Thus, it may be possible to develop an ECL-based metals sensor or biosensor consisting of organic molecules coated onto electrodes which emit light only upon complexation of particular metal ions and application of a small voltage. Toxic metals in water sources are of environmental concern. Some marine invertebrates, such as tunicates (i.e., `sea squirts') and molluscs, are noted for their ability to concentrate toxic metals as much as 100 million-fold over ambient seawater concentrations. In the present work, extracts from a tunicate species, as well as synthetic tunicate blood pigments or `tunichromes', oysters, and other organisms are examined for intrinsic ECL in the presence and absence of various metal ions. Results suggest a promising novel, potentially sensitive, and specific means for metal ion detection based on ECL.

  3. PADRÃO ULTRASSONOGRÁFICO DO PARÊNQUIMA, MEDIASTINO E TÚNICAS TESTICULARES EM BOVINOS JOVENS DA RAÇA NELORE

    Directory of Open Access Journals (Sweden)

    Diogo José Cardilli

    2010-12-01

    Full Text Available The aim of the present study was to demonstrate the ultrasonographic patterns of the testicles parenchyma, mediastinum and tunics in young Nellore bulls with absence of echogenicity and relative density changes. Testes of 111 animals underwent clinical and ultrasonographic evaluation at 9, 13, and 15 months of age. Testicular parenchyma presented uniform pattern at low echogenicity. Positive correlation was found between age and testicular mediastinum. Testicular tunics were distinguished only in presence of fluid. The results of this research contribute with andrologic evaluation, allowing early detection of testicular disorders.

  4. The Use of Computer Intensive Statistical Modeling in Estimating the Variability of Marine Fouling Communities.

    Science.gov (United States)

    1983-06-01

    hydroid Obelia sp. depending on the plate examined. Two species of solitary tunicates, Ascidia ceretodes and Styela truncata were also censused for the...Mytilus edulis x 109 MONTH NUMBER ORGANISM 2 3 4 5 6 7 8 9 10 11 Nab inaderuata: Stroqylocentrotus ppp x Chordata: Ascidia ceretodes X X X X Styela

  5. Ascidian bioresources: common and variant chemical compositions and exploitation strategy - examples of Halocynthia roretzi, Styela plicata, Ascidia sp. and Ciona intestinalis.

    Science.gov (United States)

    Zhao, Yadong; Li, Jiebing

    2016-01-01

    To explore abundant marine ascidian bioresources, four species from two orders have been compared in their chemical compositions. After a universal separation of the animal body into two fractions, all tunics have been found rich in carbohydrate contents, while all inner body tissues are richer in proteins. Cellulose is present almost exclusively in the tunics and more in the order Stolidobranchia, while more sulfated polysaccharides are present in Phlebobranchia species. Almost all proteins are collagens with a high essential amino acid index and high delicious amino acid (DAA) content. All fractions also have high contents of good-quality fatty acids and trace minerals but low toxic element contents, with different sterols and glycosaminoglycans. There are species-specific characteristics observed for vanadium accumulation and sterol structures which are also meaningful for ascidian chemotaxonomy and resource exploitation. It is suggested that in addition to the present utilizations of tunics for cellulose production and of some species' inner body tissues as human food, one should explore all species' inner body tissues as human foods and all tunics as food or animal feed with the contained cellulose as dietary fiber. Collagens, sulfated polysaccharides, glycosaminoglycans, sterols and trace elements could be explored as byproducts for, e.g. pharmaceutical and chemical industries.

  6. Secondary metabolites characteristic of Penicillium citrinum, Penicillium steckii and related species

    DEFF Research Database (Denmark)

    Malmstrom, J.; Christophersen, C.; Frisvad, Jens Christian

    2000-01-01

    an unidentified tunicate. The carboxylic acids and the benzopyran were identified on the basis of mass spectrometry, and one and two dimensional NMR spectroscopic techniques. The structures 1 and 2 resemble tanzawaic acid A-D, previously isolated from Penicillium citrinum. Screening of isolates of species related...

  7. Original Article

    African Journals Online (AJOL)

    DOCTEUR SANDA

    increased corporal fibrosis have been reported. Penile magnetic resonance imaging (MRI) provides excellent delineation of anatomy and can reveal tunical tears and urethral injury. Urethrography should only be done for suspected urethral injury. The only differential diagnosis of penile fracture is rupture of the dorsal veins ...

  8. The genus Thalia Blumenbach, 1798 (Tunicata, Thaliacea), with descriptions of two new species

    NARCIS (Netherlands)

    Soest, van R.W.M.

    1973-01-01

    Investigations of the marine pelagic tunicate genus Thalia Blumenbach, 1798, resulted in the description of two new species, T. cicar and T. sibogae. In addition the three known subspecies of Thalia democratica (Forskål, 1775) are considered full species. The distribution of these species, including

  9. Histogenesis of the Oesophagus of Guinea Fowl (Numida meleagris at Prehatch and Posthatch

    Directory of Open Access Journals (Sweden)

    Innocent Jonah Gosomji

    2016-01-01

    Full Text Available The histogenesis of the primordial oesophagus was studied to determine the period in which the tunics of the oesophagus developed and became functional in the helmeted guinea fowl (Numida meleagris. Eighteen embryos and nine keets were studied at prehatch and posthatch, respectively. Simple columnar epithelium surrounded by mesenchymal cells was obvious at the 8th day of embryonic development. By the 19th day of embryonic development, the four tunics, tunica mucosa, submucosa, tunica muscularis, and tunica adventitia/serosa, were beginning to differentiate from the mesenchymal cells and also the primordial oesophageal glands appeared as clusters of cells that invaginate from the epithelium. By the 27th day, the tunics were clearly differentiated and the primordial glands were fully developed as evident with positive reaction to Periodic Acid Schiff (PAS. The tunics of the muscularis were not well developed till at posthatch. This study therefore concludes that the primordial oesophagus is active at the late incubation due to mucin secretion by mucous glands but fully functional at posthatch since the tunica muscularis is completely developed at posthatch.

  10. THE ELIMINATION OF FOREIGN PARTICLES INJECTED INTO THE ...

    African Journals Online (AJOL)

    appears to be the meticulous work of Feng (1962, 1965, etc) on the oyster, Crassostrea vir- ginica. Also, there are groups of animals ... Work is also in progress on the sipunculid,. Golfingia, and the tunicate, Ciona. ..... REFERENCES. BAXTER, E. w. 1960. Combined oil-immersion, phase-contrast and dark-ground viewing of.

  11. Clinical pharmacology of the novel marine-derived anticancer agent Ecteinascidin 743 administered as a 1- and 3-h infusion in a phase I study

    NARCIS (Netherlands)

    van Kesteren, Charlotte; Twelves, Chris; Bowman, Angela; Hoekman, Klaas; López-Lázaro, Luis; Jimeno, José; Guzman, Cecilia; Mathôt, Ron A. A.; Simpson, Andrew; Vermorken, Jan B.; Smyth, John; Schellens, Jan H. M.; Hillebrand, Michel J. X.; Rosing, Hilde; Beijnen, Jos H.

    2002-01-01

    Ecteinascidin 743 (ET-743) is an anticancer agent derived from the Caribbean tunicate Ecteinascidia turbinata. In the present article, the pharmacokinetics and pharmacodynamics of ET-743 are described within a phase I study. Forty patients with solid tumors initially received ET-743 as a 1-h i.v.

  12. Comparison of Cellulose Supramolecular Structures Between Nanocrystals of Different Origins

    Science.gov (United States)

    Umesh P. Agarwal; Richard S. Reiner; Christopher G. Hunt; Jeffery Catchmark; E. Johan Foster; Akira Isogai

    2015-01-01

    In this study, morphologies and supramolecular structures of CNCs from wood-pulp, cotton, bacteria, tunicate, and cladophora were investigated. TEM was used to study the morphological aspects of the nanocrystals whereas Raman spectroscopy provided information on the cellulose molecular structure and its organization within a CNC. Dimensional differences between the...

  13. Mechanical properties of cellulose nanomaterials studied by contact resonance atomic force microscopy

    Science.gov (United States)

    Ryan Wagner; Robert J. Moon; Arvind Raman

    2016-01-01

    Quantification of the mechanical properties of cellulose nanomaterials is key to the development of new cellulose nanomaterial based products. Using contact resonance atomic force microscopy we measured and mapped the transverse elastic modulus of three types of cellulosic nanoparticles: tunicate cellulose nanocrystals, wood cellulose nanocrystals, and wood cellulose...

  14. Untitled

    Indian Academy of Sciences (India)

    mandibular valve (Pl. XV, Fig. 5). The pharynx is made up of mucosa, submucosa and muscularis (Pl. 1,. Fig. 6). Currey (1939) deals with the pharyngeal region of the Carp,. Cyprinus capio communis, elaborately dividing it into anterior and posterior regions on histological differences. In Tilapia mossambica the tunics are.

  15. Age, growth and feeding of the blue hottentot Pachymetopon ...

    African Journals Online (AJOL)

    The sparid Pachymetopon aeneum is a benthic carnivore feeding predominantly on hydroids, tunicates and octocorals. Juveniles and subadults occur on shallower reefs than the adults but the diet of all sizes is similar. The species is a protogynous hermaphrodite, sex reversal occurring between 200 and 300 mm forklength ...

  16. make up.contents pg

    African Journals Online (AJOL)

    spamer

    there is of the biology of their prey can assist in the inter- pretation of sperm ..... 1999. Table V: Incidence of principal food items in sperm whale stomachs at Donkergat, 1962 – 1963. Group. Number. Food item. Squid. Fish. Crabs. Mysids. Tunicates .... preferentially eat larger species of squid than females or small males.

  17. A case of associated occurrence of the crab Lauridromia inter-media (Laurie, 1906) (Crustacea: Decapoda: Dromiidae) and the actinian Nemanthus annamensis Carlgren, 1943 (Anthozoa: Actiniaria: Nemanthidae)

    NARCIS (Netherlands)

    Lavaleye, M.S.S.; Hartog, den J.C.

    1995-01-01

    Members of the crab family Dromiidae tend to cover their carapace mostly with sponges or colonial tunicates. More rarely are used other objects or organisms such as solitary Tunicata, Zoantharia (= encrusting anemones), valves of Bivalvia, etc.; a review of these is presented. A new association of a

  18. Contralateral Fracture of the Penis with Concomitant Urethral Injury ...

    African Journals Online (AJOL)

    ra

    2009-03-16

    Mar 16, 2009 ... during coitus, masturbation or nocturnal unconscious manipulation will result in high intracavernous pressure that may exceed the tunical tensile strength, resulting in its rupture. In the West, injury is most commonly reported during vigorous sexual intercourse, while cases from the Middle East resulted.

  19. The Arabian Sea: Physical environment, zooplankton and myctophid abundance

    Digital Repository Service at National Institute of Oceanography (India)

    Nair, K.K.C.; Madhupratap, M.; Gopalakrishnan, T.C.; Haridas, P.; Gauns, M.

    tunicates which are able to feed on very small particles. It would seem that the Arabian Sea sustains a large biomass of mesopelagic fishes (about 100 million tonnes), mainly myctophids. They mostly live in the core of oxygen minimum layer and ascend...

  20. Upon biodistribution and biokinetics of radioiodine-labelled diethylstilbestroldiphosphate

    International Nuclear Information System (INIS)

    Mende, T.; Wollny, G.; Gens, J.; Franke, W.G.; Schubert, J.; Kelly, L.U.

    1983-01-01

    Radioiodine-labelled ( 131 I, 125 I, 123 I) diethylstilbestroldiphosphate (DES) was investigated with respect to measuring radio-labelled hormone derivatives in animals and men. DES was injected intravenously in Wistar rats and mammatumor-bearing mice (Carcinoma solidum simplex), and activities were measured in several organs between 10 minutes and 7 days, p.inj. The liver showed strong activity concentration and long-lasting retention, smaller concentrations were found in kidneys, adrenals, blood, abdominal wall and prostate. The tumor concentration between 10 minutes and 15 hours p.inj. was below the blood concentrations and later on up to 7 days in the order of the blood concentrations, however, always significantly exceeding muscle tissue concentrations. Respective measurements were done in men using tissue cylinders from the prostate gained by puncture-biopsy or other tissue specimens gained during surgery. Activity concentration in the liver is high, therefore the scintigraphic visualization of the liver is possible immediately after injection up to 13 days later. Potentially it is a receptor-sensitive scintigraphy of the liver. (orig.) [de

  1. [Distribution of Ecteinascidia turbinata (Ascidiacea: Perophoridae) in mangroves of the Yucatán Peninsula, Mexico].

    Science.gov (United States)

    Carballo, J L

    2000-01-01

    The ascidian Ecteinascidia turbinata synthesizes some of the most promising substances against solid-type tumors, but the only available source are the natural populations of this tunicate, which is reared or collected in different parts of the world. A total of 33 locations were sampled in the Gulf of Mexico and the Yucatan Peninsula. The tunicate was not found in Veracruz, Tabasco and Campeche, but it was well established on mangrove roots in the Yucatan Peninsula where we estimated densities more or less equal to one colony and an average production of 115 g of biomass per lineal meter of mangrove coastline in one location (Río Lagartos). Sustainable management appears to be possible.

  2. Peyronie's Reconstruction for Maximum Length and Girth Gain: Geometrical Principles

    Directory of Open Access Journals (Sweden)

    Paulo H. Egydio

    2008-01-01

    Full Text Available Peyronie's disease has been associated with penile shortening and some degree of erectile dysfunction. Surgical reconstruction should be based on giving a functional penis, that is, rectifying the penis with rigidity enough to make the sexual intercourse. The procedure should be discussed preoperatively in terms of length and girth reconstruction in order to improve patient satisfaction. The tunical reconstruction for maximum penile length and girth restoration should be based on the maximum length of the dissected neurovascular bundle possible and the application of geometrical principles to define the precise site and size of tunical incision and grafting procedure. As penile rectification and rigidity are required to achieve complete functional restoration of the penis and 20 to 54% of patients experience associated erectile dysfunction, penile straightening alone may not be enough to provide complete functional restoration. Therefore, phosphodiesterase inhibitors, self-injection, or penile prosthesis may need to be added in some cases.

  3. Polyimide Cellulose Nanocrystal Composite Aerogels

    Science.gov (United States)

    Nguyen, Baochau N.; Meador, Mary Ann; Rowan, Stuart; Cudjoe, Elvis; Sandberg, Anna

    2014-01-01

    Polyimide (PI) aerogels are highly porous solids having low density, high porosity and low thermal conductivity with good mechanical properties. They are ideal for various applications including use in antenna and insulation such as inflatable decelerators used in entry, decent and landing operations. Recently, attention has been focused on stimuli responsive materials such as cellulose nano crystals (CNCs). CNCs are environmentally friendly, bio-renewable, commonly found in plants and the dermis of sea tunicates, and potentially low cost. This study is to examine the effects of CNC on the polyimide aerogels. The CNC used in this project are extracted from mantle of a sea creature called tunicates. A series of polyimide cellulose nanocrystal composite aerogels has been fabricated having 0-13 wt of CNC. Results will be discussed.

  4. Effects of an extract from the sea squirt Ecteinascidia turbinata on DNA synthesis and excision repair in human fibroblasts

    Energy Technology Data Exchange (ETDEWEB)

    Dunn, W.C.; Carrier, W.L.; Regan, J.D.

    1982-01-01

    An aqueous ethanol extract from the marine tunicate species Ecteinascidia turbinata was studied to determine its effect on semiconservative DNA synthesis in human skin fibroblast cultures as measured by (/sup 3/H) thymidine uptake in acid-insoluble cell fractions. In addition, the effect of this extract on DNA excision repair in ultraviolet light (254 nm) irradiated fibroblasts was measured by the bromodeoxyuridine photolysis assay, thymine dimer chromatography, and DNA single-strand break analysis on alkaline sucrose gradients. Repair inhibition was accompanied by an accumulation of single-strand DNA breaks which was enhanced by the addtion of 2 mM hydroxyurea. These results are discussed with respect to a mechanism of action of the marine tunicate extract at the level of DNA polymerases and are contrasted with previously studied inhibitory mechanisms of arabinofuranosyl nucleosides.

  5. Aortitis with antiphospholipid antibodies: CT and MR findings

    International Nuclear Information System (INIS)

    Seror, O.; Dordea, M.; Ghenassia, C.; Coderc, E.; Sellier, N.; Fain, O.

    1998-01-01

    Two cases of aortitis associated with the presence of antiphospholipid antibodies (APAs) are reported. Only CT and MR imaging were able to show these unusual form of aortitis preferentially affecting the outer aortic tunics. We conclude that aortitis could be a new manifestation of primary antiphospholipid syndrome (APS) and the initial pathological process before the development of aortic thrombosis, reported as a classical complication of APS. (orig.) (orig.)

  6. Aortitis with antiphospholipid antibodies: CT and MR findings

    Energy Technology Data Exchange (ETDEWEB)

    Seror, O.; Dordea, M.; Ghenassia, C.; Coderc, E.; Sellier, N. [Department of Radiology, Centre Hospitalo-Universitaire Paris XIII, Bondy (France); Fain, O. [Department of Medicine, Centre Hospitalo-Universitaire Paris XIII, Bondy (France)

    1998-10-01

    Two cases of aortitis associated with the presence of antiphospholipid antibodies (APAs) are reported. Only CT and MR imaging were able to show these unusual form of aortitis preferentially affecting the outer aortic tunics. We conclude that aortitis could be a new manifestation of primary antiphospholipid syndrome (APS) and the initial pathological process before the development of aortic thrombosis, reported as a classical complication of APS. (orig.) (orig.) With 2 figs., 6 refs.

  7. Annual abundance of salps and doliolids (Tunicata around Gorgona Island (Colombian Pacific, and their importance as potential food for green sea turtles

    Directory of Open Access Journals (Sweden)

    Laura Sampson

    2014-02-01

    Full Text Available Gorgona National Park protects fertile waters that support large vertebrates, including green sea turtles (Chelonia mydas, and for them, gelatinous zooplankton constitute a food resource that can be found year-round in Gorgona Island´s coastal waters. This study was carried out to determine the abundance of salps and doliolids around Gorgona Island over a year, and to determine whether this is a resource that could be used reliably year-round by green turtles and other large plankton-feeding predators. The monthly abundance of salps and doliolids at eight coastal stations around Gorgona Island (Colombian Pacific was determined between September 2005 and August 2006. Oblique tows were carried out from 50m to the surface, total zooplankton biomass was measured and the number of salps and doliolids per tow, and frequency of occurrence per station and month were determined. Superficial and bottom sea temperature, superficial and bottom salinity, and chlorophyll-a concentration were recorded at each station. There were tunicate abundance peaks in September 2005 and March 2006. The high abundances in March were probably due to a cold water intrusion into the study area, which resulted in colder saltier water and a shallower thermocline. Tunicates were probably advected to the area by currents from the southwest and aggregated due to the underwater topography. In September, the influence of continental river discharge as well as inputs from rainfall over the island could have provided increased nutrients and resulted in higher abundances. The large filter-feeding vertebrates that feed on tunicates include green sea turtle juveniles, which use coastal waters of Gorgona Island as feeding grounds, as part of their migration route in the Eastern Tropical Pacific. These turtles could be using tunicates opportunistically, as a sporadic resource that is available at certain times of the year. Rev. Biol. Trop. 62 (Suppl. 1: 149-159. Epub 2014 February 01.

  8. Biotechnological potential of marine natural products

    OpenAIRE

    Fusetani, Nobuhiro

    2010-01-01

    The number of marine natural products (MNPs) that have been applied to biotechnological industry is very limited, although nearly 20000 new compounds were discovered from marine organisms since the birth of MNPs in the early 1970s. However, it is apparent that they have a significant potential as pharmaceuticals, cosmetics, nutraceuticals, research tools, and others. This article focuses on selective antitumor metabolites isolated from marine sponges and tunicates, and their modes of action, ...

  9. Simulation of Changes of Activity Level of Some Carbohydrazes of Russian Sturgeon by the Influence of Environmental Osmotic Pressure by Means of Hybrid Networks

    OpenAIRE

    A. V. Tuktarov; A. N. Nevalennyy; A. S. Martyanov

    2010-01-01

    The article is devoted to the problem of simulation of the influence environmental osmotic pressure to the activity level of maltase and α-amilase of intestinal mucous tunic of Russian sturgeon. For the solving of this problem methods of neural networks and fuzzy logic are used. Create models are rated as the category of adaptive neural-fuzzy inference systems. Regularities of this influence were researched; created models have high approximate property and generalize well.

  10. Роль дисбалансу факторів агресії та захисту у шлунковому соку у розвитку кандидозу слизової оболонки верхнього відділу травного тракту

    OpenAIRE

    Кушніренко, Інесса Василівна

    2016-01-01

    Research is devoted to the study of endogenous factors that would explain conditions of the spread of Candida albicans infection into the distal parts of digestive tract and their possible connection with comorbid pathology of thyroid gland. The aim of research is the study of pepsin, glycoproteins, hexosamines, fucose, sialic acid level in the gastric juice of patients with candidiasis of mucous tunic of the upper section of digestive tract.Methods. There were examined 116 patients, who were...

  11. Search for New Bioactive Marine Natural Products and Application to Drug Development.

    Science.gov (United States)

    Kobayashi, Jun'ichi

    2016-01-01

    Natural products are well recognized as an important source of lead compounds in drug development. During the past >30 years, we have discovered >1000 novel bioactive natural products from Okinawan marine organisms (sponges, tunicates, cone shells, etc.) and microorganisms (fungi, bacteria, dinoflagellates, etc.). Some of them are used as bioprobes useful for basic studies of life sciences, while others are expected to be candidates of drug leads.

  12. Engineering of Nanoscale Antifouling and Hydrophobic Surfaces on Naval Structural Steel HY-80 by Anodizing

    Science.gov (United States)

    2015-06-01

    form a biofilm—an assemblage of attached cells, which is commonly referred to as slime [29]. These microorganisms adhere to the surface by...extracellular polymeric substances (EPS). So the biofilm, which is the result of micro fouling, comprises both the microorganisms and the EPS, and thus the... sponges , anemones, tunicates, and hydroids, whilst hard fouling comprises invertebrates such as barnacles, mussels, and tubeworms. The specific

  13. Atlantic bluefin tuna Thunnus thynnus feeding ecology in the northern Gulf of Mexico: a preliminary description of diet from the western Atlantic spawning grounds.

    Science.gov (United States)

    Butler, C M; Logan, J M; Provaznik, J M; Hoffmayer, E R; Staudinger, M D; Quattro, J M; Roberts, M A; Ingram, G W; Pollack, A G; Lutcavage, M E

    2015-01-01

    A combination of stomach contents, nitrogen stable-isotope and tissue C:N values are presented to demonstrate feeding activity of Atlantic bluefin tuna Thunnus thynnus on the Gulf of Mexico (GOMEX) spawning grounds. Diets include teleosts, cephalopods, crustaceans and a pelagic tunicate (Pyrosoma atlanticum). Results reveal the need to classify the GOMEX as a T. thynnus feeding ground. © 2014 The Fisheries Society of the British Isles.

  14. Fibrous Pseudotumor of the Tunica Vaginalis Associated With Hydrocele and Testicular Atrophy

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    Pande Made Wisnu Tirtayasa

    2014-07-01

    Full Text Available Fibrous pseudotumors of the testicular tunics and paratesticular tissue are uncommon lesions. They typically arise as painless scrotal masses that may be associated with hydrocele or history of surgery, trauma, or infection. Although benign, these lesions often clinically indicate malignancy and usually remain undiagnosed preoperatively. Here, we report on a 59-year-old man with fibrous pseudotumor of the tunica vaginalis associated with hydrocele and testicular atrophy.

  15. Muscle differentiation in a colonial ascidian: organisation, gene expression and evolutionary considerations

    Directory of Open Access Journals (Sweden)

    Burighel Paolo

    2009-09-01

    Full Text Available Abstract Background Ascidians are tunicates, the taxon recently proposed as sister group to the vertebrates. They possess a chordate-like swimming larva, which metamorphoses into a sessile adult. Several ascidian species form colonies of clonal individuals by asexual reproduction. During their life cycle, ascidians present three muscle types: striated in larval tail, striated in the heart, and unstriated in the adult body-wall. Results In the colonial ascidian Botryllus schlosseri, we investigated organisation, differentiation and gene expression of muscle beginning from early buds to adults and during zooid regression. We characterised transcripts for troponin T (BsTnT-c, adult muscle-type (BsMA2 and cytoplasmic-type (BsCA1 actins, followed by in situ hybridisation (ISH on sections to establish the spatio-temporal expression of BsTnT-c and BsMA2 during asexual reproduction and in the larva. Moreover, we characterised actin genomic sequences, which by comparison with other metazoans revealed conserved intron patterns. Conclusion Integration of data from ISH, phalloidin staining and TEM allowed us to follow the phases of differentiation of the three muscle kinds, which differ in expression pattern of the two transcripts. Moreover, phylogenetic analyses provided evidence for the close relationship between tunicate and vertebrate muscle genes. The characteristics and plasticity of muscles in tunicates are discussed.

  16. A conserved non-reproductive GnRH system in chordates.

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    Takehiro G Kusakabe

    Full Text Available Gonadotropin-releasing hormone (GnRH is a neuroendocrine peptide that plays a central role in the vertebrate hypothalamo-pituitary axis. The roles of GnRH in the control of vertebrate reproductive functions have been established, while its non-reproductive function has been suggested but less well understood. Here we show that the tunicate Ciona intestinalis has in its non-reproductive larval stage a prominent GnRH system spanning the entire length of the nervous system. Tunicate GnRH receptors are phylogenetically closest to vertebrate GnRH receptors, yet functional analysis of the receptors revealed that these simple chordates have evolved a unique GnRH system with multiple ligands and receptor heterodimerization enabling complex regulation. One of the gnrh genes is conspicuously expressed in the motor ganglion and nerve cord, which are homologous structures to the hindbrain and spinal cord of vertebrates. Correspondingly, GnRH receptor genes were found to be expressed in the tail muscle and notochord of embryos, both of which are phylotypic axial structures along the nerve cord. Our findings suggest a novel non-reproductive role of GnRH in tunicates. Furthermore, we present evidence that GnRH-producing cells are present in the hindbrain and spinal cord of the medaka, Oryzias latipes, thereby suggesting the deep evolutionary origin of a non-reproductive GnRH system in chordates.

  17. A HOMILY OF MEISTER ECKHART PREACHED IN THE ACADEMY OF PARIS ON THE FEAST DAY OF SAINT AUGUSTINE («VAS AURI SOLIDUM»

    Directory of Open Access Journals (Sweden)

    Yevgeniy Shilov

    2013-02-01

    Full Text Available This article is devoted to the study of a little known homily of Meister Eckhart («Vas auri solidum» which he preached on Saint Augustine’s feast day in Paris. Before including the translation of this discourse, the author discusses the specific nature of the so-called academic homily. Preaching a homily was regarded as one of the obligations of a university professor of the time and this task was regulated according to strict guidelines and requirements. Such a homily possessed a specific structure. The author explains its main requirement. This type of homily was meant to explain and interpret a chosen text taken from Holy Scripture. Meister Eckhart actually planned to compose an extended three-part work combining elements of philosophy and theology which was to be known as his Opus tripartitum. One of its parts was to be a collection of model homilies (Opus sermonus. He began this work but did not finish it. Although we today possess only a few sketches and outlines of the Latin homilies of Meister Eckhart, which themselves are characterised by their lack of structure, they provide an excellent understanding of the mind of their author as well as rare insight into the place of Saint Augustine as a master of scholastic thought. In addition, this homily provides the only indication of the place of birth of the renowned mediaeval author. After an in-depth study of the text of the homily, the author concludes that Meister Eckhart borrowed his outline and system of classification from the School of Chartres and especially from Clarembald of Arras, an interpreter of Boethius. Using these sources, Eckhart formulated his idea of the two ways of knowing God: the way of ethics (Augustine and the way of metaphysics (Aristotle, Dionysius the Areopagite and Boethius

  18. Salvage hypospadias repairs

    Directory of Open Access Journals (Sweden)

    Sripathi V

    2008-01-01

    Full Text Available Aim: Review of our experience and to develop an algorithm for salvage procedures in the management of hypospadias cripples and treatment of urethral strictures following hypospadias repair. Methods: This is a retrospective review of hypospadias surgeries over a 41-month period. Out of a total 168 surgeries, 20 were salvage/re-operative repairs. In three children a Duplay repair was feasible, while in four others a variety of single-stage repairs could be done. The repair was staged in seven children - buccal mucosal grafts (BMGs in five, buccal mucosal tube in one, and skin graft in one. Five children with dense strictures were managed by dorsal BMG inlay grafting in one, vascularized tunical onlay grafting on the ventrum in one, and a free tunical patch in one. Three children were treated by internal urethrotomy and stenting for four weeks with a poor outcome. Results: The age of children ranged from 1.5-15 years (mean 4.5. Follow-up ranged from 3 months to 3.5 years. Excellent results were obtained in 10 children (50% with a well-surfaced erect penis and a slit-like meatus. Glans closure could not be achieved and meatus was coronal in three. Two children developed fistulae following a Duplay repair and following a staged BMG. Three repairs failed completely - a composite repair broke down, a BMG tube stenosed with a proximal leak, and a stricture recurred with loss of a ventral free tunical graft. Conclusions: In salvage procedures performed on hypospadias cripples, a staged repair with buccal mucosa as an inlay in the first stage followed by tubularization 4-6 months later provides good results. A simple algorithm to plan corrective surgery in failed hypospadias cases and obtain satisfactory results is devised.

  19. Cellulose whisker/epoxy resin nanocomposites.

    Science.gov (United States)

    Tang, Liming; Weder, Christoph

    2010-04-01

    New nanocomposites composed of cellulose nanofibers or "whiskers" and an epoxy resin were prepared. Cellulose whiskers with aspect ratios of approximately 10 and approximately 84 were isolated from cotton and sea animals called tunicates, respectively. Suspensions of these whiskers in dimethylformamide were combined with an oligomeric difunctional diglycidyl ether of bisphenol A with an epoxide equivalent weight of 185-192 and a diethyl toluenediamine-based curing agent. Thin films were produced by casting these mixtures and subsequent curing. The whisker content was systematically varied between 4 and 24% v/v. Electron microscopy studies suggest that the whiskers are evenly dispersed within the epoxy matrix. Dynamic mechanical thermoanalysis revealed that the glass transition temperature (T(g)) of the materials was not significantly influenced by the incorporation of the cellulose filler. Between room temperature and 150 degrees C, i.e., below T(g), the tensile storage moduli (E') of the nanocomposites increased modestly, for example from 1.6 GPa for the neat polymer to 4.9 and 3.6 GPa for nanocomposites comprising 16% v/v tunicate or cotton whiskers. The relative reinforcement was more significant at 185 degrees C (i.e., above T(g)), where E' was increased from approximately 16 MPa (neat polymer) to approximately 1.6 GPa (tunicate) or approximately 215 MPa (cotton). The mechanical properties of the new materials are well-described by the percolation model and are the result of the formation of a percolating whisker network in which stress transfer is facilitated by strong interactions between the whiskers.

  20. Production and characterization of polyhydroxybutyrate from Vibrio harveyi MCCB 284 utilizing glycerol as carbon source.

    Science.gov (United States)

    Mohandas, S P; Balan, L; Lekshmi, N; Cubelio, S S; Philip, R; Bright Singh, I S

    2017-03-01

    Production and characterization of polyhydroxybutyrate (PHB) from moderately halophilic bacterium Vibrio harveyi MCCB 284 isolated from tunicate Phallusia nigra. Twenty-five bacterial isolates were obtained from tunicate samples and three among them exhibited an orange fluorescence in Nile red staining indicating the presence of PHB. One of the isolates, MCCB 284, which showed rapid growth and good polymer yield, was identified as V. harveyi. The optimum conditions of the isolate for the PHB production were pH 8·0, sodium chloride concentration 20 g l -1 , inoculum size 0·5% (v/v), glycerol 20 g l -1 and 72 h of incubation at 30°C. Cell dry weight (CDW) of 3·2 g l -1 , PHB content of 2·3 g l -1 and final PHB yield of 1·2 g l -1 were achieved. The extracted PHB was characterized by FTIR, NMR and DSC-TGA techniques. An isolate of V. harveyi that could effectively utilize glycerol for growth and PHB accumulation was obtained from tunicate P. nigra. PHB produced was up to 72% based on CDW. This is the first report of an isolate of V. harveyi which utilizes glycerol as the sole carbon source for PHB production with high biomass yield. This isolate could be of use as candidate species for commercial PHB production using glycerol as the feed stock or as source of genes for recombinant PHB production or for synthetic biology. © 2016 The Society for Applied Microbiology.

  1. Development of a marine subtidal epibiotic community in Hong Kong: implications for deployment of artificial reefs.

    Science.gov (United States)

    Qiu, Jian-Wen; Thiyagarajan, Vengatesen; Leung, Albert W; Qian, Pei-Yuan

    2003-02-01

    A 2-year study was conducted in Hong Kong to examine the effects of substratum, season and length of submersion on the development of a subtidal epibiotic community using four types of settlement panels (concrete, steel, wood and tyre). The season and length of submersion had a strong influence on the total biomass and on community structure while the type of substratum had very little impact on the total biomass or the structure of the epibiotic community. The season of submersion determined the species composition of the newly submerged surfaces. In the spring and summer, tubeworms were the most abundant. In the autumn and winter, barnacles and tunicates dominated. Community succession was not obvious in the first year of submersion as it was intermingled with strong seasonal settlement, growth and death of barnacles and tunicates. In the second year of submersion, green mussels and tunicates settled and grew to occupy most of the panel surfaces, forming an assemblage that was characteristic of climax communities in the local subtidal waters. The results suggest that the type of construction material has limited impact on the development of epibiotic communities on artificial reefs deployed in Hong Kong; the season of submersion may affect community structure in the early successional stage, but not the characteristics of the climax communities. This study indicates that the type of substratum should not be of concern when deploying artificial reefs in the subtidal waters in this region. The design of artificial reefs should focus more on other physical and economical aspects such as durability, flow dynamics, stability, cost, and effects on the ambient environment.

  2. [Polar constituents of the ascidia Botryllus schlosseri].

    Science.gov (United States)

    Usov, A I; Slanchev, K I; Smirnova, G P; Ivanova, A P; Stefanov, K L; Popov, S S; Andreev, S N

    2002-01-01

    Eighteen compounds were identified by GC-MS of their trimethylsilyl derivatives in n-butanolic extract from the biomass of Botryllus schlosseri. Three of them, 5-oxoproline, 5-hydroxyhydantoin, and kinurenic acid, were found in marine invertebrates for the first time. In addition to cellulose, the biomass was also shown to contain complex water-soluble sulfated polysaccharides. These were extracted and fractionated, and sulfate content and monosaccharide composition were determined in the fractions; fucose, xylose, galactose, mannose, glucose, glucosamine, galactosamine, and uronic acids were found. Unlike several other tunicate species, Botryllus schlosseri does not seem to contain any simple galactan sulfate.

  3. ON THE STRUCTURE OF THE MEDIAN SEGMENT OF THE DIGESTIVE TUBE AND ON THE ACTIVITY OF ALPHA-AMYLASE AT ARISTICHTHYS NOBILIS, IN VARIOUS STAGES OF DEVELOPMENT

    Directory of Open Access Journals (Sweden)

    Gabriela Vasile

    2007-12-01

    Full Text Available The investigations have been dedicated to the structure of the median segment of the digestive tube, on Aristichthys nobilis individuals of various ages (i.e., one summer- and, respectively, four summer-old, correlated, on one side, with the main feeding regime and, on the other, with the amylasic activity present in this part of the digestive tract. As to the structural aspects, higher values of the thickness of the mucous tunic have been recorded in the four summer-old bighead carp individuals, to be possibly associated with the high values of the α-amylase activity in this segment of the digestive tube.

  4. Marine natural products.

    Science.gov (United States)

    Blunt, John W; Copp, Brent R; Keyzers, Robert A; Munro, Murray H G; Prinsep, Michèle R

    2016-03-01

    This review covers the literature published in 2014 for marine natural products (MNPs), with 1116 citations (753 for the period January to December 2014) referring to compounds isolated from marine microorganisms and phytoplankton, green, brown and red algae, sponges, cnidarians, bryozoans, molluscs, tunicates, echinoderms, mangroves and other intertidal plants and microorganisms. The emphasis is on new compounds (1378 in 456 papers for 2014), together with the relevant biological activities, source organisms and country of origin. Reviews, biosynthetic studies, first syntheses, and syntheses that lead to the revision of structures or stereochemistries, have been included.

  5. Meroterpenes from Marine Invertebrates: Structures, Occurrence, and Ecological Implications

    Directory of Open Access Journals (Sweden)

    Anna Aiello

    2013-05-01

    Full Text Available Meroterpenes are widely distributed among marine organisms; they are particularly abundant within brown algae, but other important sources include microorganisms and invertebrates. In the present review the structures and bioactivities of meroterpenes from marine invertebrates, mainly sponges and tunicates, are summarized. More than 300 molecules, often complex and with unique skeletons originating from intra- and inter-molecular cyclizations, and/or rearrangements, are illustrated. The reported syntheses are mentioned. The issue of a potential microbial link to their biosynthesis is also shortly outlined.

  6. Antimicrobial Compounds from Marine Invertebrates-Derived Microorganisms.

    Science.gov (United States)

    Liu, Juan; Jung, Jee H; Liu, Yonghong

    2016-01-01

    It is known that marine invertebrates, including sponges, tunicates, cnidaria or mollusks, host affluent and various communities of symbiotic microorganisms. The microorganisms associated with the invertebrates metabolized various biologically active compounds, which could be an important resource for the discovery and development of potentially novel drugs. In this review, the new compounds with antimicrobial activity isolated from marine invertebrate-derived microorganisms in the last decade (2004-2014) will be presented, with focus on the relevant antimicrobial activities, origin of isolation, and information of strain species. New compounds without antimicrobial activity were not revealed.

  7. Meroterpenes from Marine Invertebrates: Structures, Occurrence, and Ecological Implications

    Science.gov (United States)

    Menna, Marialuisa; Imperatore, Concetta; D’Aniello, Filomena; Aiello, Anna

    2013-01-01

    Meroterpenes are widely distributed among marine organisms; they are particularly abundant within brown algae, but other important sources include microorganisms and invertebrates. In the present review the structures and bioactivities of meroterpenes from marine invertebrates, mainly sponges and tunicates, are summarized. More than 300 molecules, often complex and with unique skeletons originating from intra- and inter-molecular cyclizations, and/or rearrangements, are illustrated. The reported syntheses are mentioned. The issue of a potential microbial link to their biosynthesis is also shortly outlined. PMID:23685889

  8. Molecular architecture and biomedical leads of terpenes from red sea marine invertebrates.

    Science.gov (United States)

    Hegazy, Mohamed Elamir F; Mohamed, Tarik A; Alhammady, Montaser A; Shaheen, Alaa M; Reda, Eman H; Elshamy, Abdelsamed I; Aziz, Mina; Paré, Paul W

    2015-05-20

    Marine invertebrates including sponges, soft coral, tunicates, mollusks and bryozoan have proved to be a prolific source of bioactive natural products. Among marine-derived metabolites, terpenoids have provided a vast array of molecular architectures. These isoprenoid-derived metabolites also exhibit highly specialized biological activities ranging from nerve regeneration to blood-sugar regulation. As a result, intense research activity has been devoted to characterizing invertebrate terpenes from both a chemical and biological standpoint. This review focuses on the chemistry and biology of terpene metabolites isolated from the Red Sea ecosystem, a unique marine biome with one of the highest levels of biodiversity and specifically rich in invertebrate species.

  9. Molecular Architecture and Biomedical Leads of Terpenes from Red Sea Marine Invertebrates

    Directory of Open Access Journals (Sweden)

    Mohamed Elamir F. Hegazy

    2015-05-01

    Full Text Available Marine invertebrates including sponges, soft coral, tunicates, mollusks and bryozoan have proved to be a prolific source of bioactive natural products. Among marine-derived metabolites, terpenoids have provided a vast array of molecular architectures. These isoprenoid-derived metabolites also exhibit highly specialized biological activities ranging from nerve regeneration to blood-sugar regulation. As a result, intense research activity has been devoted to characterizing invertebrate terpenes from both a chemical and biological standpoint. This review focuses on the chemistry and biology of terpene metabolites isolated from the Red Sea ecosystem, a unique marine biome with one of the highest levels of biodiversity and specifically rich in invertebrate species.

  10. Cells of the immune system in atherosclerosis – chosen data

    Directory of Open Access Journals (Sweden)

    Paulina Niedźwiedzka-Rystwej

    2010-08-01

    Full Text Available Development of artherosclerosis is associated with participation of various cell types of the immune system such as: granulocytes, B and T lymphocytes, mast cells, dendritic cells and progenitor cells. Cytokines and growth factors have a great impact on activation of the atheromatous plaque. This pathological process results in increase of artery’s tunic intima thickness, leading to coronary heart disease, myocardial infarction or stroke. It is suggested that a closer look at participation of the immune system cells in artherosclerosis may contribute to a change in the profile of therapy of this disease.

  11. Oxidative transformation of a tunichrome model compound provides new insight into the crosslinking and defense reaction of tunichromes.

    Science.gov (United States)

    Abebe, Adal; Kuang, Qun F; Evans, Jason; Robinson, William E; Sugumaran, Manickam

    2017-04-01

    Tunichromes, small oligopeptides with dehydrodopa units isolated from the blood cells of ascidians, have been implicated in the defense reactions, metal binding, wound repair, or tunic formation. Their instability and high reactivity has severely hampered the assessment of their biological role. Experiments conducted with the model compound, 1,2-dehydro-N-acetyldopamine, indicated that the instability of tunichromes is due to this basic structure. Exposure of this catecholamine derivative to even mild alkaline condition such as pH 7.5 causes rapid nonenzymatic oxidation. High performance liquid chromatography and mass spectrometry studies confirmed the production of dimeric and other oligomeric products in the reaction mixture. The nonenzymatic reaction seemed to proceed through the intermediary formation of semiquinone free radical and superoxide anion. Ultraviolet and visible spectral studies associated with the oxidation of tunichromes isolated from Ascidia nigra by tyrosinase indicated the probable formation of oligomeric tunichrome products. Attempts to monitor the polymerization reaction by mass spectrometry ended in vain. Tunichrome also exhibited instability in mild alkaline conditions generating superoxide anions. Based on these studies, a possible role for oxidative transformation of tunichrome in defense reaction, tunic formation and wound healing is proposed. Copyright © 2017 Elsevier Inc. All rights reserved.

  12. Vascular Endothelial Growth Factor Receptor Family in Ascidians, Halocynthia roretzi (Sea Squirt. Its High Expression in Circulatory System-Containing Tissues

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    Saeed Samarghandian

    2013-03-01

    Full Text Available The vascular endothelial growth factor (VEGF-VEGF Receptor (VEGFR system is an important pathway for regulation of angiogenesis. However, its evolutionary development, particularly the step from invertebrates to vertebrates, is still largely unknown. Here, we molecularly cloned the VEGFR-like gene from Halocynthia roretzi, a species belonging to the Tunicata, the chordate subphylum recently considered the sister group of vertebrates. The cDNA encoded a homolog of human VEGFR, including the transmembrane domain, and the tyrosine kinase domain with a kinase-insert region, which was designated S. sq VEGFR (GenBank AB374180. Similar to Tunicates including ascidians in the phylogenetic tree, the Amphioxus, another chordate, is located close to vertebrates. However, S. sq VEGFR has a higher homology than the Amphioxus VEGFR-like molecule (GenBank AB025557 to human VEGFR in the kinase domain-2 region. The S. sq VEGFR mRNA was expressed at highest levels in circulatory system-containing tissues, suggesting that S. sq VEGFR plays an important role in the formation or maintenance of circulatory system in Tunicates, Halocynthia roretzi.

  13. Flux of energy and essential elements through the continental shelf ecosystem. Progress report, May 31, 1980-May 31, 1981

    Energy Technology Data Exchange (ETDEWEB)

    Pomeroy, L R

    1981-02-01

    There are three distinct areas of research reported, studies of intrusions of the west wall of the Gulf Stream onto the outer continental shelf, studies of the flux of materials across near-shore density fronts, and advances in the understanding of the planktonic food web of the continental shelf. Studies of frontal events on the outer and inner continental shelf involve distinctive physical and chemical regimes and have proven to required distinctive biological approaches. A simulation model of the flux of energy through the continental shelf food web was developed. It represents realistically both details of the energy transfers within the plankton community and the termanal production of fishes. It was discovered that the fecal ribbons of pelagic tunicates break up into flocculent material visually and chemically identical with the flocculent organic aggregates present in sea water. Subsequent experimental work with tunicate fecal matter indicates that some of the naturally occurring aggregates are indeed fecal. This makes it possible to understand and quantify for the first time the production and fate of that population of seston. An examination was made of several of the many roles of dissolved organic compounds in sea water which originate either from release by phytoplankton, digestive processes or metabolites of zooplankton, or extracellular digestion of microorganisms.

  14. Ontology for the asexual development and anatomy of the colonial chordate Botryllus schlosseri.

    Directory of Open Access Journals (Sweden)

    Lucia Manni

    Full Text Available Ontologies provide an important resource to integrate information. For developmental biology and comparative anatomy studies, ontologies of a species are used to formalize and annotate data that are related to anatomical structures, their lineage and timing of development. Here, we have constructed the first ontology for anatomy and asexual development (blastogenesis of a bilaterian, the colonial tunicate Botryllus schlosseri. Tunicates, like Botryllus schlosseri, are non-vertebrates and the only chordate taxon species that reproduce both sexually and asexually. Their tadpole larval stage possesses structures characteristic of all chordates, i.e. a notochord, a dorsal neural tube, and gill slits. Larvae settle and metamorphose into individuals that are either solitary or colonial. The latter reproduce both sexually and asexually and these two reproductive modes lead to essentially the same adult body plan. The Botryllus schlosseri Ontology of Development and Anatomy (BODA will facilitate the comparison between both types of development. BODA uses the rules defined by the Open Biomedical Ontologies Foundry. It is based on studies that investigate the anatomy, blastogenesis and regeneration of this organism. BODA features allow the users to easily search and identify anatomical structures in the colony, to define the developmental stage, and to follow the morphogenetic events of a tissue and/or organ of interest throughout asexual development. We invite the scientific community to use this resource as a reference for the anatomy and developmental ontology of B. schlosseri and encourage recommendations for updates and improvements.

  15. Particle Image Velocimetry (PIV) Measurements of Suspension-Feeding Velocities

    Science.gov (United States)

    Du Clos, K.; Jones, I. T.; Carrier, T. J.; Jumars, P. A.

    2016-02-01

    Active suspension feeders, such as bivalves and tunicates, connect benthic and pelagic ecosystems by packaging suspended matter into larger fecal and pseudofecal particles, greatly enhancing the flux of carbon and nutrients from the water column to the benthos. The volume of water processed by a population of suspension feeders is commonly estimated by scaling up results from experiments that measure the clearance rate (the volume of water cleared of particles per time) of one or a few individual suspension feeders. Clearance rates vary, however, between species, within a species, and over time for a single individual; and the velocity fields produced by suspension feeders are likely to interact in complex ways. We measured the water velocity fields produced by two species of bivalve, Mya arenaria and Mercenaria mercenaria, and the tunicate Ciona intestinalis, using particle image velocimetry (PIV). We used these measurements to calculate flow rates and Reynolds numbers of inhalant and exhalant siphons. We also observed strong entrainment of water by M. arenaria's exhalant siphon jet that may help to explain how the clam avoids depleting the water around it of particles and oxygen as it feeds. We are using these measurements to inform computational fluid mechanics (CFD) models of suspension feeding, allowing us to examine the interactions of flow fields produced by multiple suspension feeders and other effects not quantified by clearance-rate measurements.

  16. Histologia geral dos intestinos do Caiman crocodilus yacare (Daudin, 1802 (Crocodilia: Reptilia

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    Sonia Maria Jin

    1990-01-01

    Full Text Available General histology of small intestine (duodenum and jejunum and the large intestine (colon and cloaca of C. c. yacare (Daudin, 1802 Crocodilia-Reptilia. A comparative description is made of the histology of the small and large intestine of C. c. yacare. In all segments mucosa, submucosa, muscularis and serosa tunics were observed. The duodenum as very long villi, wich are well-developed and attached together to form irregular transverse ridges, covered with simple columnar epithelium with marginal and goblet cells. In the jejunum, the villi are shorter and less frequent. The colon as few folds, covered with the same epithelium; the lamina própria contains straight tubular glands with absortive cells, goblet and Paneth cells. The cloaca is very complex, with three well-defined regions: coprodeum, urodeum and proctodeum. In the coprodeum, the wall is folded, less muscular and the thin mucosa is covered by an epithelium with a few basal cells and mucosal cells. The urodeum as an additional external muscular tunic, with striated muscle fibers and a stritifield cylindrical epithelium with goblet cells. The proctodeum includes the free part of the penis in the male and, laterally, the ducts of a pair of holocrine cloacal glands. Near the opening of the ducts, the epithelium changes to a squamous keratinized type.

  17. Detection of yellow dwarf virus onion (OYDV) and garlic common latent virus (GCLV) in Costa Rican garlic (Allium sativum L)

    International Nuclear Information System (INIS)

    Guillen Watson, Anny Vannesa; Chacon Cerdas, Randall; Zuniga Vega, Claudia

    2011-01-01

    Viral diseases have been responsible for significant losses in crop yield of garlic in the world. Costa Rican material Garlic has been analyzed to determine the incidence of : onion yellow dwarf virus (OYDV), the leek yellow stripe virus (LYSV), shallot latent virus (SLV) and garlic common latent virus (GLCV). The DAS-ELISA technique has been used for status native plant material. Bulbs field apparently normal (N), normal with yellow tunic (TA) and deformed (D) and normal field sheets (N), symptomatic (S) and possible presence of viral vectors (VT) were used. Vitroplants product have analyzed the introduction of apices of 1,0 and 0,5 cm in length teeth from normal (N) and yellow tunic (TA). The 33% of the bulbs GCLV field were analyzed for positive (TA), whereas OYDV was detected 100% appearance regardless. 100% of the plantlets have presented without infection of GCLV, the OYDV only those introduced in apices of 1,0 cm from bulbs with yellow robes have shown without effect. GCLV is determined for 100% of the samples for both batches OYDV bulb formation in vitro and in only 50%. In the Costa Rican garlic has concluded that are present the viruses of GCLV and OYDV, with a high incidence on local material and differential infection according to the organ analyzed. Various methodologies combined are recommended together with the apexes vitro cultivation, for more effective viral clearance and thus increase the value and boost the local seed crop. (author) [es

  18. Sessile macro-epibiotic community of solitary ascidians, ecosystem engineers in soft substrates of Potter Cove, Antarctica

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    Clara Rimondino

    2015-01-01

    Full Text Available The muddy bottoms of inner Potter Cove, King George Island (Isla 25 de Mayo, South Shetlands, Antarctica, show a high density and richness of macrobenthic species, particularly ascidians. In other areas, ascidians have been reported to play the role of ecosystem engineers, as they support a significant number of epibionts, increasing benthic diversity. In this study, a total of 21 sessile macro-epibiotic taxa present on the ascidian species Corella antarctica Sluiter, 1905, Cnemidocarpa verrucosa (Lesson, 1830 and Molgula pedunculata Herdman, 1881 were identified, with Bryozoa being the most diverse. There were differences between the three ascidian species in terms of richness, percent cover and diversity of sessile macro-epibionts. The morphological characteristics of the tunic surface, the available area for colonization (and its relation with the age of the basibiont individuals and the pH of the ascidian tunic seem to explain the observed differences. Recent environmental changes in the study area (increase of suspended particulate matter caused by glaciers retreat have been related to observed shifts in the benthic community structure, negatively affecting the abundance and distribution of the studied ascidian species. Considering the diversity of sessile macro-epibionts found on these species, the impact of environmental shifts may be greater than that estimated so far.

  19. False fracture of the penis: Different pathology but similar clinical presentation and management

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    Adel Kurkar

    2014-01-01

    Full Text Available Introduction: Penile fracture is the most common presentation of acute penis. Rupture of the superficial dorsal penile vein (s may mimic penile fractures with similar clinical presentation but with intact corporeal bodies. Our aim of the study is to highlight superficial dorsal penile vein (s injury as true emergency with better prognosis. Subjects and Methods: Sixty-eight patients with suspected penile fractures presented to our hospital between June 2007 and January 2013. Out of these, 11 patients showed intact tunica albuginea on exploration with injured dorsal penile vein (s identified. Records of such 11 cases were reviewed regarding age, etiology, symptoms, physical signs, findings of surgical exploration and post-operative erectile function. Results: All 11 patients were injured during sexual intercourse and presented with penile swelling and ecchymosis and gradual detumescence. Mild penile pain was encountered in 5 cases and the "snap" sound was noted in 2 cases. Examination revealed no localized tenderness, or tunical defect. All the patients regained penile potency without deformity after surgical ligation of the severed vessels. One patient developed penile hypoesthesia. Conclusion: Although the classic "snap" sound and immediate detumescence are usually lacking in the symptomology of dorsal penile vein rupture, its clinical presentation can be indistinguishable from true penile fracture. Surgical exploration is still required to avoid missing tunical tear with possible future complications. The long-term outcome and prognosis are excellent.

  20. Sensors for isolation of anti-cancer compounds found within marine invertebrates

    Science.gov (United States)

    Wiegand, Gordon; LaRue, Amanda

    2015-05-01

    Highly evolved bacteria living within immobile marine animals are being targeted as a source of antitumor pharmaceuticals. This paper describes 2 electo-optical sensor systems developed for identifying species of tunicates and actinobacteria that live within them. Two stages of identification include 1) a benthic survey apparatus to locate species and 2) a laboratory housed cell analysis platform used to classify their bacterial micro-biome. Marine Optics Sampling- There are over 3000 species of Tunicates that thrive in diverse habitats. We use a system of cameras, GPS and the GPS/photo integration application on a PC laptop to compile a time / location stamp for each image taken during the dive survey. A shape-map of x/y coordinates of photos are stored for later identification and sampling. Flow Cytometers/cell sorters housed at The Medical University of South Carolina and The University of Maryland have been modified to produce low-noise, high signal wave forms used for bacteria analysis. We strive to describe salient contrasts between these two fundamentally different sensor systems. Accents are placed on analog transducers and initial step sensing systems and output.

  1. Use of autologous grafts in the treatment of acquired penile curvature: An experience of 33 cases.

    Science.gov (United States)

    Khawaja, Abdul Rouf; Dar, Tanveer Iqbal; Zahur, Suhael; Tariq, Sheikh; Hamid, Arf; Wani, M S; Wazir, B S; Iqbal, Arsheed

    2016-01-01

    The objective was to compare the use of autologous dermal and temporalis fascia grafts in the treatment of acquired penile curvatures. It was a prospective observational study of 33 cases, conducted in Sher-i-Kashmir Institute of Medical Sciences, Srinagar from March 2007 to September 2013. All the patients had stable Peyronies disease (PD). Dorsal, dorsolateral and vental curvatures with good preoperative erections were included. PD index with visual analog scales for curvature was used preoperatively. An informed written consent was taken from all the patients with main emphasis on erectile dysfunction. After an average follow up of 2 years, complete straightening of penis was observed in all patients with satisfactory sexual intercourse in 30 patients (90%). Three patients (10%) required frequent use of type 5 phosphodiesterase inhibitors for adequate erections. Overall 91% of patients and partners were satisfied with the procedure and cosmetically donor site was better in temporalis fascia graft site. No rejection of any graft was noted and glans hypoesthesia was noticed in 4 patients (12%). None of the patients required penile prosthesis. Total operative time for harvesting and application of the graft was more in dermal grafts (>3 hrs) than for temporalis fascia graft (2 hrs). Tunical lengthening procedures by autologous free grafts represents a safe and reproducible technique. A good preoperative erectile function is required for tunical lengthening procedure. Temporalis fascia graft is thin, tough membrane and effective graft for PD with good cosmetic and functional results.

  2. The Ciona intestinalis genome: when the constraints are off

    Science.gov (United States)

    Holland, Linda Z.; Gibson-Brown, Jeremy J.

    2003-01-01

    The recent genome sequencing of a non-vertebrate deuterostome, the ascidian tunicate Ciona intestinalis, makes a substantial contribution to the fields of evolutionary and developmental biology.1 Tunicates have some of the smallest bilaterian genomes, embryos with relatively few cells, fixed lineages and early determination of cell fates. Initial analyses of the C. intestinalis genome indicate that it has been evolving rapidly. Comparisons with other bilaterians show that C. intestinalis has lost a number of genes, and that many genes linked together in most other bilaterians have become uncoupled. In addition, a number of independent, lineage-specific gene duplications have been detected. These new results, although interesting in themselves, will take on a deeper significance once the genomes of additional invertebrate deuterostomes (e.g. echinoderms, hemichordates and amphioxus) have been sequenced. With such a broadened database, comparative genomics can begin to ask pointed questions about the relationship between the evolution of genomes and the evolution of body plans. Copyright 2003 Wiley Periodicals, Inc.

  3. Distal regeneration involves the age dependent activity of branchial sac stem cells in the ascidian Ciona intestinalis

    Science.gov (United States)

    2014-01-01

    Abstract Tunicates have high capacities for regeneration but the underlying mechanisms and their relationship to life cycle progression are not well understood. Here we investigate the regeneration of distal structures in the ascidian tunicate Ciona intestinalis. Analysis of regenerative potential along the proximal−distal body axis indicated that distal organs, such as the siphons, their pigmented sensory organs, and the neural complex, could only be replaced from body fragments containing the branchial sac. Distal regeneration involves the formation of a blastema composed of cells that undergo cell proliferation prior to differentiation and cells that differentiate without cell proliferation. Both cell types originate in the branchial sac and appear in the blastema at different times after distal injury. Whereas the branchial sac stem cells are present in young animals, they are depleted in old animals that have lost their regeneration capacity. Thus Ciona adults contain a population of age‐related stem cells located in the branchial sac that are a source of precursors for distal body regeneration. PMID:25893097

  4. Penicillosides A and B: new cerebrosides from the marine-derived fungus Penicillium species

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    Samar S.A. Murshid

    Full Text Available Abstract In the course of our ongoing effort to identify bioactive compounds from marine-derived fungi, the marine fungus, Penicillium species was isolated from the Red Sea tunicate, Didemnum species. Two new cerebrosides, penicillosides A and B were isolated from the marine-derived fungus, Penicillium species using different chromatographic methods. Their structures were established by different spectroscopic data including 1D (1H NMR and 13C NMR and 2D NMR (COSY, HSQC, and HMBC studies as well as high-resolution mass spectral data. Penicilloside A displayed antifungal activity against Candida albicans while penicilloside B illustrated antibacterial activities against Staphylococcus aureus and Escherichia coli in the agar diffusion assay. Additionally, both compounds showed weak activity against HeLa cells.

  5. PECULIARITIES OF CLINICAL COURSE AND TREATMENT OF ALLERGIC RHINITIS ASSOCIATED WITH CANDIDA IN SCHOOLCHILDREN

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    T. G. Malanicheva

    2011-01-01

    Full Text Available 60 children 7–15 years old with year-round allergic rhinitis (AR and colonization of mucous tunic with Candida and Staphylococcus aureus were observed. At the first stage main group (35 children was treated with antibiotic fusafungine — Bioparox which is active against Candida and Staphylococcus aureus in dosage 4 inhalations 4 times daily during 7–10 days combined with antihistamine drugs. At the second stage patients received anti-allergic treatment of year-round AR with cromones, topical corticosteroids and antihistamine drugs according to the severity of a disease. The second group (25 children was treated according to the traditional anti-allergicь scheme of therapy. Complex treatment with fusafungine resulted in beneficial therapeutic effect in 77 % patients. Exacerbation period decreased 1.8 times lower and remission was 2.7 times longer. Cultural mycological and bacteriological analyses were negative in most patients with AR.

  6. Fournier's gangrene syndrome in a chimpanzee (Pan troglodytes).

    Science.gov (United States)

    Okeson, Danelle M; Marrow, Judilee; Carpenter, James W; Armbrust, Laura J; Ragsdale, John M; Klocke, Emily

    2010-03-01

    A 37-yr-old male chimpanzee (Pan troglodytes) was evaluated for intermittent diarrhea, scrotal swelling, and lethargy of 2 days duration. Physical examination revealed marked swelling of the scrotum and perineal tissues with mild pitting edema and crepitus. Computed tomography revealed a mixed gas and soft-tissue density extending from the caudal ventral subcutaneous tissues caudally to the scrotum and perineal tissues. Surgical exploration and castration were performed to establish drainage, and culture revealed a polymicrobial infection. A diagnosis of scrotal and fascial plane abscessation consistent with Fournier's gangrene was made. Although castration with open drainage was performed, the animal died 36 hr after surgery. Postmortem examination and histopathology revealed necrotizing fasciitis of the penis, vaginal tunic, and subcutaneous perineal and perianal tissues.

  7. The amphioxus genome and the evolution of the chordate karyotype

    Energy Technology Data Exchange (ETDEWEB)

    Putnam, Nicholas H.; Butts, Thomas; Ferrier, David E.K.; Furlong, Rebecca F.; Hellsten, Uffe; Kawashima, Takeshi; Robinson-Rechavi, Marc; Shoguchi, Eiichi; Terry, Astrid; Yu, Jr-Kai; Benito-Gutierrez, Elia; Dubchak, Inna; Garcia-Fernandez, Jordi; Gibson-Brown, Jeremy J.; Grigoriev, Igor V.; Horton, Amy C.; de Jong, Pieter J.; Jurka, Jerzy; Kapitonov, Vladimir; Kohara, Yuji; Kuroki, Yoko; Lindquist, Erika; Lucas, Susan; Osoegawa, Kazutoyo; Pennacchio, Len A.; Salamov, Asaf A.; Satou, Yutaka; Sauka-Spengler, Tatjana; Schmutz[, Jeremy; Shin-I, Tadasu; Toyoda, Atsushi; Bronner-Fraser, Marianne; Fujiyama, Asao; Holland, Linda Z.; Holland, Peter W. H.; Satoh, Nori; Rokhsar, Daniel S.

    2008-04-01

    Lancelets ('amphioxus') are the modern survivors of an ancient chordate lineage with a fossil record dating back to the Cambrian. We describe the structure and gene content of the highly polymorphic {approx}520 million base pair genome of the Florida lancelet Branchiostoma floridae, and analyze it in the context of chordate evolution. Whole genome comparisons illuminate the murky relationships among the three chordate groups (tunicates, lancelets, and vertebrates), and allow reconstruction of not only the gene complement of the last common chordate ancestor, but also a partial reconstruction of its genomic organization, as well as a description of two genome-wide duplications and subsequent reorganizations in the vertebrate lineage. These genome-scale events shaped the vertebrate genome and provided additional genetic variation for exploitation during vertebrate evolution.

  8. Synthesis of (3S,3′S- and meso-Stereoisomers of Alloxanthin and Determination of Absolute Configuration of Alloxanthin Isolated from Aquatic Animals

    Directory of Open Access Journals (Sweden)

    Yumiko Yamano

    2014-05-01

    Full Text Available In order to determine the absolute configuration of naturally occurring alloxanthin, a HPLC analytical method for three stereoisomers 1a–c was established by using a chiral column. Two authentic samples, (3S,3′S- and meso-stereoisomers 1b and 1c, were chemically synthesized according to the method previously developed for (3R,3′R-alloxanthin (1a. Application of this method to various alloxanthin specimens of aquatic animals demonstrated that those isolated from shellfishes, tunicates, and crucian carp are identical with (3R,3′R-stereoisomer 1a, and unexpectedly those from lake shrimp, catfish, biwa goby, and biwa trout are mixtures of three stereoisomers of 1a–c.

  9. The ascidian Styela plicata hemocytes as a potential biomarker of marine pollution: In vitro effects of seawater and organic mercury.

    Science.gov (United States)

    Parrinello, D; Bellante, A; Parisi, M G; Sanfratello, M A; Indelicato, S; Piazzese, D; Cammarata, M

    2017-02-01

    Toxic metals, such as mercury, contribute substantially to anthropogenic pollution in many estuarine environments. Animals living in those environments, particularly invertebrate filter feeders like tunicates, can be used as bioindicators. In an attempt to identify cellular markers for revealing pollution, this study examined in vitro the effects of different concentrations of methyl mercury on Styela plicata hemocytes. The harvested hemocytes from S. plicata that were exposed to the metal had a significant mortality, cellular count and morphometric alterations. These findings provided evidence of MeHg immunotoxic effects on S. plicata, resulting in hemocyte death and morphological changes induced by cytoskeleton alterations. Thus, a morphometric cellular parameter, such as spreading ability, was used as a complementary method for differentiation between hemocytes treated with a marine solution (as a negative control) and hemocytes incubated with methylmercury and/or Sicilian seawater samples. Copyright © 2016 Elsevier Inc. All rights reserved.

  10. [Cardiac tamponade as first manifestation in Mediterranean fever with autosomal dominant form].

    Science.gov (United States)

    Sánchez Ferrer, F; Martinez Villar, M; Fernández Bernal, A; Martín de Lara, I; Paya Elorza, I

    2015-01-01

    Familial Mediterranean fever (FMF) is a hereditary disease characterized by brief, recurring and self-limited episodes of fever and pain with inflammation, of one or several serous (peritoneum, pleura, pericardium, synovial or vaginal tunic of the testicle). Amyloidosis is its more important complication and the principal reason of death in the cases in which it appears. Diagnosis is based on the clinic and is confirmed by genetic tests. The treatment with Colchicine (0,02-0,03 mg/kg/day) prevents the recurrence of FMF attacks and the development of secondary (AA) amyloidosis. We report a case of a 13-year-old child in which FMF was diagnosed after several coincidental episodes with fever, pericarditis and cardiac tamponade. The genetic confirmation showed an autosomal dominant inheritance that is less frecuent than the recesive form, in this disease. Copyright © 2013 Asociación Española de Pediatría. Published by Elsevier Espana. All rights reserved.

  11. Thermoregulation of the bovine scrotum 1: measurements of free-range animals in a paddock and pen

    Science.gov (United States)

    Wallage, Andrea L.; Johnston, S. D.; Lisle, A. T.; Beard, L.; Lees, A. M.; Collins, C. W.; Gaughan, J. B.

    2017-08-01

    The bull's scrotum and scrotal cord vasculature has traditionally been regarded as a thermoregulatory device for maintaining optimal testicular temperature for normal spermatogenesis. This assumption has mostly been derived from discrete measurements using thermocouples with limited data correlating continuous scrotal temperature (ST) to body temperature (BT). From mid-summer to early autumn, four Wagyu bulls (9-18 months) were surgically implanted with two data loggers (DL) logging at 30 min intervals: one on the right hand side flank and the other was attached to the visceral vaginal tunic of the mid-testis. Bulls were firstly housed in a paddock (PK) for 13 days and then moved to individual pens (IP), again for 13 days. Repeated measures analysis modelled the long-term and diurnal trends in BT and ST. While both day and time of day (TOD) were significant effects for ST at both housing locations ( P thermoregulation capacity.

  12. Magnetic resonance imaging in the differential diagnosis of true placenta accreta: a clinical case

    Directory of Open Access Journals (Sweden)

    E. V. Tarachkova

    2016-01-01

    Full Text Available True placenta accreta is the attachment of chorionic villi to the myometrium, possibly penetrating into the thickness of the myometrium and its outside, including through the serous tunic. The main current diagnostic techniques are considered to be ultrasonography, laboratory diagnosis (elevated human chorionic gonadotropin and placental lactogen levels, and clinical data (pain and vaginal discharge. Magnetic resonance imaging is deemed to be an adjuvant technique. By using a clinical example, this paper considers the capabilities of magnetic resonance imaging to diagnose this abnormality and to choose a right treatment policy. The abnormality is compared with the conditions (trophoblastic tumor and myoma with lysis that are similar in their diagnosis and magnetic resonance pattern. The disorder in question is rather rare and its detailed consideration, determination of the capabilities of various techniques, and comparison with externally similar cases areimportant for the development of diagnostic opportunities.

  13. Antibacterial Derivatives of Marine Algae: An Overview of Pharmacological Mechanisms and Applications

    Directory of Open Access Journals (Sweden)

    Emer Shannon

    2016-04-01

    Full Text Available The marine environment is home to a taxonomically diverse ecosystem. Organisms such as algae, molluscs, sponges, corals, and tunicates have evolved to survive the high concentrations of infectious and surface-fouling bacteria that are indigenous to ocean waters. Both macroalgae (seaweeds and microalgae (diatoms contain pharmacologically active compounds such as phlorotannins, fatty acids, polysaccharides, peptides, and terpenes which combat bacterial invasion. The resistance of pathogenic bacteria to existing antibiotics has become a global epidemic. Marine algae derivatives have shown promise as candidates in novel, antibacterial drug discovery. The efficacy of these compounds, their mechanism of action, applications as antibiotics, disinfectants, and inhibitors of foodborne pathogenic and spoilage bacteria are reviewed in this article.

  14. [The age factor in bilateral hydrocele diagnosis secondary to a primitive testis lymphoma: case report, diagnosis and therapy].

    Science.gov (United States)

    Spaziani, E; Di Filippo, A; Picchio, M; De Angelis, F; Corazza, S; Narilli, F; Cimino, G

    2012-01-01

    Primitive NHL represents 9% of testis tumours and the 85% is diagnosed in patient older thant 60 years old. Usually pain and a testis mass are the main manifestations. The Authors report the case of a 82 years-old man with bilateral hydrocele causing severe alteration in the deambulation. The cytology did not show blood cells or neoplastic cell in the FNAB. The US showed a complete modification in the testis. The patient underwent to surgery intervention of vaginalis tunic eversion and resection with the aim of control the symptoms. The histology on multiple biopsy of testis and epidydims bilaterally showed a large B-cell lymphoma. The patient was treated with 6 chemotheray cycles (Rituximab, Vincristine, Cyclophosphamide, Prednisone). Bilateral hydrocele is a rare clinical presentation of testis NHL. In this patient, blood and neoplastic cell absence in the cytology made difficult the differential diagnosis between inflammatory pathology and neoplasia. Hystopathologic study and immunologic pattern can make a certain diagnosis.

  15. Styela clava Herdman (Urochordata, Ascidiacea), a successful immigrant to North West Europe: ecology, propagation and chronology of spread

    Science.gov (United States)

    Lützen, J.

    1998-09-01

    Since its first occurrence at Plymouth, southern England, in 1952 the East Asiatic ascidian Styela clava has spread to many localities along the coasts of the south and west British Isles, Ireland, northern France, Belgium, the Netherlands, Denmark and Germany. While some dispersal may occur by natural means, spreading over long distances is probably due to transfer along with oysters when relaid elsewhere. Transport while attached to the hulls of ships or drifting Sargassum is also possible. Styela clava is a large, hardy and fast-growing species with a tough, leathery tunic, and has no recorded enemies or native analogues among the NW European ascidian fauna. At many sites it has established dense populations of 500-1000 specimens/m2 and in some cases has nearly outcompeted some of the native ascidian species.

  16. Cellulose nanocrystal properties and their applications

    Directory of Open Access Journals (Sweden)

    mahdi jonoobi

    2015-05-01

    Full Text Available The main purpose of this work is to provide an overview of recent research in the area of cellulose nonmaterials production from different sources. Due to their abundance, their renewability, high strength and stiffness, being eco-friendly, and low weight; numerous studies have been reported on the isolation of cellulose nanomaterials from different cellulosic sources and their use in high performance applications. This work covers an introduction into the nano cellulose definition as well as used methods for isolation of nanomaterials (nanocrystals from various sources. The rod-like cellulose nanocrystals (CNC can be isolated from sources like wood, plant fibers, agriculture and industrial bio residues, tunicates, and bacterial cellulose using acid hydrolysis process. Following this, the paper focused on characterization methods, materials properties and structure. The current review is a comprehensive literature regarding the nano cellulose isolation and demonstrates the potential of cellulose nanomaterials to be used in a wide range of high-tech applications.

  17. Vista y plano de Toledo

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    Kitaura, Yasunari

    2015-12-01

    Full Text Available In View and plan of Toledo, a faithful representation of the city and homage to it, the vision of the Virgin as well as the nude on the left, allegory of the river Tagus, sustenance of the life of the region represented by the youth clothed in olive-green, all are casual images presented in the sky, on the earth and in the thicket. El Greco’s imagination operates with almost mathematical rigour. A genealogical link can be traced between Jesus’ tunic in the Modena-Triptych, the tunic of the kneeled angel of the Baptism of the Prado and the chasuble carried by the Virgin in Vista y plano. The composition of the picture is related to the Adoration of the first period, repeating the youth with the map the same role of Saint Jerome with the Vulgata.En Vista y plano de Toledo, que es fiel retrato y homenaje a la ciudad, tanto la visión de la Virgen como el desnudo de la izquierda, alegoría del río Tajo, sustento básico para la vida de la región representada por el joven de la derecha, son imágenes casuales aparecidas en el cielo, en la tierra y en los matorrales. La fantasía grequiana opera con un rigor casi matemático. Se observa una genealogía establecida entre la túnica de Jesús del Tríptico de Módena, la del ángel arrodillado del Bautismo del Prado y la casulla portada por la Virgen en Vista y plano. La composición de Vista y plano está relacionada con la Adoración de la primera época toledana, estableciendo un vínculo entre el joven con el plano y san Jerónimo con la Vulgata.

  18. Cytotoxicity of the Ascidian Cystodytes dellechiajei Against Tumor Cells and Study of the Involvement of Associated Microbiota in the Production of Cytotoxic Compounds

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    Josefa Antón

    2007-07-01

    Full Text Available Many cytotoxic compounds of therapeutic interest have been isolated from marine invertebrates, and some of them have been reported to be of microbial origin. Pyridoacridine alkaloids are the main compounds extracted from the ascidian Cystodytes dellechiajei. Here we describe the in vitro antiproliferative activity against different tumor cell lines of the ascidian extracts and provide some insights on the role of the microbial community associated with the tunicate in the production of these compounds. C. dellechiajei extracts showed remarkably high antiproliferative activity (IC50 ≤5 μg/mL in human lung carcinoma A-549, colon adenocarcinoma H-116, pancreatic adenocarcinoma PSN-1 and breast carcinoma SKBR3 cell lines. Moreover, we found that the maximum activity was located in the tunic tissue of the colony, which harbours a microbial community. In order to ascertain the involvement of this community in the synthesis of the bioactive compounds different approachs that included culture and culture independent methods were carried out. We undertook a screening for antiproliferative activities of the bacterial isolates from the ascidian, as well as a comprative analysis of the cytotoxic activities and the microbial communities from two color morphs of the ascidian, green and blue. In addition, the changes of the antiproliferative activities and the composition of the microbial communities were studied from ascidians kept in aquaria and treated with antibiotics for one month. Our data obtained from the different experiments did not point out to bacteria as the source of the cytotoxic compounds, suggesting thus an ascidian origin.

  19. Bacterial endosymbiosis in a chordate host: long-term co-evolution and conservation of secondary metabolism.

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    Jason C Kwan

    Full Text Available Intracellular symbiosis is known to be widespread in insects, but there are few described examples in other types of host. These symbionts carry out useful activities such as synthesizing nutrients and conferring resistance against adverse events such as parasitism. Such symbionts persist through host speciation events, being passed down through vertical transmission. Due to various evolutionary forces, symbionts go through a process of genome reduction, eventually resulting in tiny genomes where only those genes essential to immediate survival and those beneficial to the host remain. In the marine environment, invertebrates such as tunicates are known to harbor complex microbiomes implicated in the production of natural products that are toxic and probably serve a defensive function. Here, we show that the intracellular symbiont Candidatus Endolissoclinum faulkneri is a long-standing symbiont of the tunicate Lissoclinum patella, that has persisted through cryptic speciation of the host. In contrast to the known examples of insect symbionts, which tend to be either relatively recent or ancient relationships, the genome of Ca. E. faulkneri has a very low coding density but very few recognizable pseudogenes. The almost complete degradation of intergenic regions and stable gene inventory of extant strains of Ca. E. faulkneri show that further degradation and deletion is happening very slowly. This is a novel stage of genome reduction and provides insight into how tiny genomes are formed. The ptz pathway, which produces the defensive patellazoles, is shown to date to before the divergence of Ca. E. faulkneri strains, reinforcing its importance in this symbiotic relationship. Lastly, as in insects we show that stable symbionts can be lost, as we describe an L. patella animal where Ca. E. faulkneri is displaced by a likely intracellular pathogen. Our results suggest that intracellular symbionts may be an important source of ecologically significant

  20. The evolving proteome of a complex extracellular matrix, the Oikopleura house.

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    Julia Hosp

    Full Text Available Extracellular matrices regulate biological processes at the level of cells, tissues, and in some cases, entire multicellular organisms. The subphylum Urochordata exemplifies the latter case, where animals are partially or completely enclosed in "houses" or "tunics". Despite this common strategy, we show that the house proteome of the appendicularian, Oikopleura, has very little in common with the proteome of the sister class, ascidian, Ciona. Of 80 identified house proteins (oikosins, ∼half lack domain modules or similarity to known proteins, suggesting de novo appearance in appendicularians. Gene duplication has been important in generating almost 1/3 of the current oikosin complement, with serial duplications up to 8 paralogs in one family. Expression pattern analyses revealed that individual oikosins are produced from specific fields of cells within the secretory epithelium, but in some cases, migrate up to at least 20 cell diameters in extracellular space to combine in defined house structures. Interestingly, peroxidasin and secretory phospholipase A(2 domains, implicated in innate immune defence are secreted from the anlage associated with the food-concentrating filter, suggesting that this extra-organismal structure may play, in part, such a role in Oikopleura. We also show that sulfation of proteoglycans is required for the hydration and inflation of pre-house rudiments into functional houses. Though correct proportioning in the production of oikosins would seem important in repetitive assembly of the complex house structure, the genomic organization of oikosin loci appears incompatible with common enhancers or locus control regions exerting such a coordinate regulatory role. Thus, though all tunicates employ extracellular matrices based on a cellulose scaffold as a defining feature of the subphylum, they have evolved radically different protein compositions associated with this common underlying structural theme.

  1. Natural Products from Antarctic Colonial Ascidians of the Genera Aplidium and Synoicum: Variability and Defensive Role

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    Conxita Avila

    2012-08-01

    Full Text Available Ascidians have developed multiple defensive strategies mostly related to physical, nutritional or chemical properties of the tunic. One of such is chemical defense based on secondary metabolites. We analyzed a series of colonial Antarctic ascidians from deep-water collections belonging to the genera Aplidium and Synoicum to evaluate the incidence of organic deterrents and their variability. The ether fractions from 15 samples including specimens of the species A. falklandicum, A. fuegiense, A. meridianum, A. millari and S. adareanum were subjected to feeding assays towards two relevant sympatric predators: the starfish Odontaster validus, and the amphipod Cheirimedon femoratus. All samples revealed repellency. Nonetheless, some colonies concentrated defensive chemicals in internal body-regions rather than in the tunic. Four ascidian-derived meroterpenoids, rossinones B and the three derivatives 2,3-epoxy-rossinone B, 3-epi-rossinone B, 5,6-epoxy-rossinone B, and the indole alkaloids meridianins A–G, along with other minoritary meridianin compounds were isolated from several samples. Some purified metabolites were tested in feeding assays exhibiting potent unpalatabilities, thus revealing their role in predation avoidance. Ascidian extracts and purified compound-fractions were further assessed in antibacterial tests against a marine Antarctic bacterium. Only the meridianins showed inhibition activity, demonstrating a multifunctional defensive role. According to their occurrence in nature and within our colonial specimens, the possible origin of both types of metabolites is discussed.

  2. Sex-specific chromatin landscapes in an ultra-compact chordate genome.

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    Navratilova, Pavla; Danks, Gemma Barbara; Long, Abby; Butcher, Stephen; Manak, John Robert; Thompson, Eric M

    2017-01-01

    In multicellular organisms, epigenome dynamics are associated with transitions in the cell cycle, development, germline specification, gametogenesis and inheritance. Evolutionarily, regulatory space has increased in complex metazoans to accommodate these functions. In tunicates, the sister lineage to vertebrates, we examine epigenome adaptations to strong secondary genome compaction, sex chromosome evolution and cell cycle modes. Across the 70 MB Oikopleura dioica genome, we profiled 19 histone modifications, and RNA polymerase II, CTCF and p300 occupancies, to define chromatin states within two homogeneous tissues with distinct cell cycle modes: ovarian endocycling nurse nuclei and mitotically proliferating germ nuclei in testes. Nurse nuclei had active chromatin states similar to other metazoan epigenomes, with large domains of operon-associated transcription, a general lack of heterochromatin, and a possible role of Polycomb PRC2 in dosage compensation. Testis chromatin states reflected transcriptional activity linked to spermatogenesis and epigenetic marks that have been associated with establishment of transgenerational inheritance in other organisms. We also uncovered an unusual chromatin state specific to the Y-chromosome, which combined active and heterochromatic histone modifications on specific transposable elements classes, perhaps involved in regulating their activity. Compacted regulatory space in this tunicate genome is accompanied by reduced heterochromatin and chromatin state domain widths. Enhancers, promoters and protein-coding genes have conserved epigenomic features, with adaptations to the organization of a proportion of genes in operon units. We further identified features specific to sex chromosomes, cell cycle modes, germline identity and dosage compensation, and unusual combinations of histone PTMs with opposing consensus functions.

  3. Biology of the invasive ascidian Ascidiella aspersa in its native habitat: Reproductive patterns and parasite load

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    Lynch, Sharon A.; Darmody, Grainne; O'Dwyer, Katie; Gallagher, Mary Catherine; Nolan, Sinead; McAllen, Rob; Culloty, Sarah C.

    2016-11-01

    The European sea squirt Ascidiella aspersa is a solitary tunicate native to the northeastern Atlantic, commonly found in shallow and sheltered marine ecosystems where it is capable of forming large clumps and outcompeting other invertebrate fauna at settlement. To date, there have been relatively few studies looking at the reproductive biology and health status of this invasive species. Between 2006 and 2010 sampling of a native population took place to investigate gametogenesis and reproductive cycle and to determine the impact of settlement depth on reproduction. In addition, parasite diversity and impact was assessed. A staging system to assess reproductive development was determined. The study highlighted that from year to year the tunicate could change its reproductive strategy from single sex to hermaphrodite, with spawning possible throughout the year. Depth did not impact on sex determination, however, gonad maturation and spawning occurred earlier in individuals in deeper waters compared to shallow depth and it also occurred later in A. aspersa at sites further away from the open sea. Four significant parasite groups including eugregarines, ciliates, trematodes and turbellarians were detected and prevalence of parasite infections increased in A. aspersa at sites with a reduced water flow rate. This study demonstrates the high biotic potential of this ascidian bioinvader to have a negative impact on native fauna in an introduced ecosystem, due to its highly efficient reproductive and resource allocation strategies. Artificial structures such as mooring lines can harbour large aggregations of A. aspersa, however, these manmade habitats may facilitate the colonisation and establishment of this invasive species in the benthos. Additionally, the parasite communities that A. aspersa harbour may also exacerbate its negative impact, both ecologically and economically, in an introduced area by possibly leading to the emergence of new disease in native species i

  4. The mitochondrial genome of Phallusia mammillata and Phallusia fumigata (Tunicata, Ascidiacea: high genome plasticity at intra-genus level

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    Pesole Graziano

    2007-08-01

    Full Text Available Abstract Background Within Chordata, the subphyla Vertebrata and Cephalochordata (lancelets are characterized by a remarkable stability of the mitochondrial (mt genome, with constancy of gene content and almost invariant gene order, whereas the limited mitochondrial data on the subphylum Tunicata suggest frequent and extensive gene rearrangements, observed also within ascidians of the same genus. Results To confirm this evolutionary trend and to better understand the evolutionary dynamics of the mitochondrial genome in Tunicata Ascidiacea, we have sequenced and characterized the complete mt genome of two congeneric ascidian species, Phallusia mammillata and Phallusia fumigata (Phlebobranchiata, Ascidiidae. The two mtDNAs are surprisingly rearranged, both with respect to one another and relative to those of other tunicates and chordates, with gene rearrangements affecting both protein-coding and tRNA genes. The new data highlight the extraordinary variability of ascidian mt genome in base composition, tRNA secondary structure, tRNA gene content, and non-coding regions (number, size, sequence and location. Indeed, both Phallusia genomes lack the trnD gene, show loss/acquisition of DHU-arm in two tRNAs, and have a G+C content two-fold higher than other ascidians. Moreover, the mt genome of P. fumigata presents two identical copies of trnI, an extra tRNA gene with uncertain amino acid specificity, and four almost identical sequence regions. In addition, a truncated cytochrome b, lacking a C-terminal tail that commonly protrudes into the mt matrix, has been identified as a new mt feature probably shared by all tunicates. Conclusion The frequent occurrence of major gene order rearrangements in ascidians both at high taxonomic level and within the same genus makes this taxon an excellent model to study the mechanisms of gene rearrangement, and renders the mt genome an invaluable phylogenetic marker to investigate molecular biodiversity and speciation

  5. The morphologic changes in the wall of the human urinary tracts after direct electro pulse exposure: the in vitro research

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    A.V. Gudkov

    2013-02-01

    Full Text Available The aim – study of the morphological changes in the wall of the human urinary tracts, developing after direct electro pulse exposure (DEPE. Materials and methods – The fragments of the surgical material obtained after the pelvis (n=25, ureter (n=33 and urinary bladder (n=20 open operations, were used in the research. DEPE was carried out by single (from 1 to 20 nanosecond pulses with the power of 0.8 J (joule and 1.0 J made by the electro pulse “Urolit-105M” lithotriptor probe on the fragments’ mucous tunic placed in the Petri dishes with 0.9% NaCl solution. The fragments were fixed in the formalin and after the processing, and pouring with paraffin, the tissue slices were prepared. Results – The kidney pelvis wall, where changes like epithelium desquamation, the basal membrane disorganization, paretic capillary expansion did not go beyond sub mucous layer even after exposure by 10 pulses with the power 1.0 J each, aimed at one point, proved to be the most resistant to DEPE. In the fragments of ureter and urinary bladder the same changes were detected after exposure by 5 pulses with the power of 1.0 J each, whereas after exposure by 10 pulses with the power 1.0 J each the changes occurred which were restricted by the muscular layer. Conclusion – The DEPEon the mucous tunic of the isolated urinary tracts fragments by the means of 10 pulses with the power of 1.0 J each looks safe, causes morphologic changes, restricted by the muscular layer and does not lead to the wall perforation.

  6. Stem cells are units of natural selection for tissue formation, for germline development, and in cancer development.

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    Weissman, Irving L

    2015-07-21

    It is obvious that natural selection operates at the level of individuals and collections of individuals. Nearly two decades ago we showed that in multi-individual colonies of protochordate colonial tunicates sharing a blood circulation, there exists an exchange of somatic stem cells and germline stem cells, resulting in somatic chimeras and stem cell competitions for gonadal niches. Stem cells are unlike other cells in the body in that they alone self-renew, so that they form clones that are perpetuated for the life of the organism. Stem cell competitions have allowed the emergence of competitive somatic and germline stem cell clones. Highly successful germline stem cells usually outcompete less successful competitors both in the gonads of the genotype partner from which they arise and in the gonads of the natural parabiotic partners. Therefore, natural selection also operates at the level of germline stem cell clones. In the colonial tunicate Botryllus schlosseri the formation of natural parabionts is prevented by a single-locus highly polymorphic histocompatibility gene called Botryllus histocompatibility factor. This limits germline stem cell predation to kin, as the locus has hundreds of alleles. We show that in mice germline stem cells compete for gonad niches, and in mice and humans, blood-forming stem cells also compete for bone marrow niches. We show that the clonal progression from blood-forming stem cells to acute leukemias by successive genetic and epigenetic events in blood stem cells also involves competition and selection between clones and propose that this is a general theme in cancer.

  7. Tracking the evolution of alternatively spliced exons within the Dscam family

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    Vision Todd J

    2006-02-01

    Full Text Available Abstract Background The Dscam gene in the fruit fly, Drosophila melanogaster, contains twenty-four exons, four of which are composed of tandem arrays that each undergo mutually exclusive alternative splicing (4, 6, 9 and 17, potentially generating 38,016 protein isoforms. This degree of transcript diversity has not been found in mammalian homologs of Dscam. We examined the molecular evolution of exons within this gene family to locate the point of divergence for this alternative splicing pattern. Results Using the fruit fly Dscam exons 4, 6, 9 and 17 as seed sequences, we iteratively searched sixteen genomes for homologs, and then performed phylogenetic analyses of the resulting sequences to examine their evolutionary history. We found homologs in the nematode, arthropod and vertebrate genomes, including homologs in several vertebrates where Dscam had not been previously annotated. Among these, only the arthropods contain homologs arranged in tandem arrays indicative of mutually exclusive splicing. We found no homologs to these exons within the Arabidopsis, yeast, tunicate or sea urchin genomes but homologs to several constitutive exons from fly Dscam were present within tunicate and sea urchin. Comparing the rate of turnover within the tandem arrays of the insect taxa (fruit fly, mosquito and honeybee, we found the variants within exons 4 and 17 are well conserved in number and spatial arrangement despite 248–283 million years of divergence. In contrast, the variants within exons 6 and 9 have undergone considerable turnover since these taxa diverged, as indicated by deeply branching taxon-specific lineages. Conclusion Our results suggest that at least one Dscam exon array may be an ancient duplication that predates the divergence of deuterostomes from protostomes but that there is no evidence for the presence of arrays in the common ancestor of vertebrates. The different patterns of conservation and turnover among the Dscam exon arrays

  8. Distribución de Ecteinascidia turbinata (Ascidiacea: Perophoridae en los manglares de la Península de Yucatán, México

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    José Luis Carballo

    2000-06-01

    Full Text Available La ascidia Ecteinascidia turbinata sintetiza un grupo de moléculas consideradas hoy en día como unas de las más prometedoras contra diversos tipos de tumores. Sin embargo, la síntesis de este compuesto todavía no se ha podido conseguir químicamente, y la única fuente de producto activo la constituye las poblaciones naturales de este tunicado, el cual se cultiva o colecta en distintas partes del mundo para la obtención del producto activo. Con este trabajo, se ha intentado hacer una valoración preliminar de la población de E. turbinata en el Golfo de México y Península de Yucatán. Se muestrearon 33 localidades, desde el Estado de Veracruz en el Golfo de México, hasta Quintana Roo en el Caribe. Parece que la especie está bien establecida en la Península de Yucatán; sobre todo en el Mar Caribe, aunque se trata de poblaciones discontinuas y separadas geográficamente. Entre todas las localidades prospectadas, solo en Río Lagartos situada al Norte de la Península de Yucatán, se detectaron poblaciones con densidades próximas a 1 colonia/metro margen de manglar, y una producción media de 115 g de biomasa por metro lineal de manglar, que podría ofrecer posibilidades para establecer un programa de manejo del recurso de manera sustentable.The ascidian Ecteinascidia turbinata synthesizes some of the most promising substances against solid-type tumors, but the only available source are the natural populations of this tunicate, which is reared or collected in different parts of the world. A total of 33 locations were sampled in the Gulf of Mexico and the Yucatan Peninsula. The tunicate was not found in Veracruz, Tabasco and Campeche, but it was well established on mangrove roots in the Yucatan Peninsula where we estimated densities more or less equal to one colony and an average production of 115 g of biomass per lineal meter of mangrove coastline in one location (Río Lagartos. Sustainable management appears to be possible.

  9. Interstitial cell tumor in a black-and-white ruffed lemur (Varecia variegatus variegatus).

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    Neiffer, D L; Klein, E C

    2001-06-01

    A 14.5-yr-old, male black-and-white ruffed lemur (Varecia variegatus variegatus) presented for acute enlargement of the left testicle and hemiscrotum. Physical examination also revealed poor pelage quality with short guard hairs, sparse undercoat, and areas of alopecia. Increased aggression was also reported. A unilateral, open orchiectomy was performed, with the left testicle, epidydymis, associated vaginal tunic, and attached spermatic cord removed. Microscopic evaluation was consistent with an interstitial cell tumor, with many morphologic features similar to this neoplasm in people. No overt histopathologic criteria of malignancy were present. Following orchiectomy, gradual improvement in pelage quality was noted and was considered almost normal by 5 mo postoperative. In contrast with the aggressive preoperative behavior, the lemur was extremely submissive for 3 mo following the surgery. Gradual return to normal behavior and social status occurred over the next 2 mo. Multiple follow-up examinations and radiographs revealed no evidence of metastasis, and biopsy of the remaining testicle 4 mo later revealed no evidence of neoplasia. Serial measurements of testosterone and estradiol revealed levels within the range of those for other ruffed lemurs, as were repeated measurements taken of the remaining testicle. At 19 mo postoperative, the lemur had a coat quality considered nearly normal and maintained its historical social position in the lemur group without abnormal aggressive behavior.

  10. Molecular Dynamics and Electron Density Studies of Siderophores and Peptides.

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    Fidelis, Krzysztof Andrzej

    1990-08-01

    The dissertation comprises three separate studies of siderophores and peptides. In the first of these studies the relative potential energies for a series of diastereomers of a siderophore neocoprogen I are evaluated with molecular mechanics force field methods. Charges on the hydroxamate moiety are determined with a synthetic model siderophore compound using valence population refinements, and alternatively, with the theoretical ab initio/ESP calculations. The single diastereomer found in the crystal structure is among four characterized by the low potential energy, while prevalence of Delta vs. Lambda configuration about the iron is found to be a property of the entire series. In the second study the crystal structure of a ferrichrome siderophore ferrirhodin is reported. The crystal structure conformation of the molecular backbone as well as the iron coordination geometry compare well with other ferrichrome structures. The differences between the acyl groups of ferrirubin and ferrirhodin are explored using the methods of molecular mechanics. The third study a 300 ps, 300 K, in vacuo molecular dynamics simulation of didemnin A and B yields distinct molecular conformers, which are different from the one found in the crystal structure or modeled in solution, using the Nuclear Overhauser Effect data. Evaluations of the relative potential energy are performed with short 10 ps simulations in solution. Didemnins are natural depsipeptides isolated from a Caribbean tunicate and characterized by particularly potent antiproliferative and immunomodulatory activity. Conformationally rigid and flexible regions of the molecule are described. A short review of the molecular mechanics methodology is given in the introduction.

  11. Vanadium K-edge x-ray absorption spectroscopy reveals species differences within the same ascidian genera. A comparison of whole blood from Ascidia nigra and Ascidia ceratodes.

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    Frank, P; Hodgson, K O; Kustin, K; Robinson, W E

    1998-09-18

    Vanadium K-edge x-ray absorption spectroscopy (XAS) was used to examine whole blood preparations from the tunicates Ascidia nigra and Ascidia ceratodes. Each XAS spectrum exhibits a rising edge inflection near 5480 eV characteristic of vanadium(III) and an intensity maximum at 5484.0 eV. In A. ceratodes blood cells, intrinsic aquo-VSO4+ complex ion is indicated by an inflection feature at 5476 eV in the first derivative of the vanadium K-edge XAS spectrum, but this feature is notably absent from the first derivative of the vanadium K-edge spectrum of blood cells from A. nigra. A strong pre-edge feature at 5468.6 eV also uniquely distinguishes the vanadium K-edge XAS spectrum of A. nigra blood cells, implying that vanadyl ion represents approximately 25% of the endogenous vanadium. However, the energy position of the rising edge inflection of the vanadium K-edge XAS spectrum of A. nigra (5479.5 eV) is 1 eV lower than that of A. ceratodes (5480.5 eV), the reverse of any expected shift arising from the endogenous vanadyl ion. Thus, in contrast to A. ceratodes, a significant fraction of the blood cell vanadium(III) in A. nigra is apparently in a ligation environment substantially different from that provided by water. These novel species-related differences may have taxonomic significance.

  12. Modiolarca lateralis (Pteryomorphia: Mytilidae: bivalve associated to six species of ascidians from Bocas del Toro, Panama

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    Juan I Cañete

    2013-11-01

    Full Text Available We describe the presence of the bivalve Modiolarca lateralis (Say, 1822 in six tropical ascidians Ascidia curvata, A. sydneiensis, A. panamensis, A. interrupta, Herdmania pallida and Polycarpa spongiabilis collected at depths of 1-3 m on coral reefs, mangrove roots and dock supports in Almirante Bay, Bocas del Toro, Panama (9°18'N, 82°13'W during June-July 2011. Bivalve prevalence varied between 9-30% across species, but was mainly associated with A. panamensis, P. spongiabilis and A. interrupta. Prevalence seems to be influenced by tunic thickness rather than by the ascidian size. Bivalves varied in size (0.6-11 mm shell length, with the smallest individual found in A. sydneiensis. There were only one or two bivalves per ascidians, although a maximum of 18 was found in one A. panamensis. M. lateralis seems to behave similarly to its temperate counterparts: it has a variety of hosts, occurs mainly in the anterior region of the ascidians, and has a variable abundance per host.

  13. Identification of Vanabin-interacting protein 1 (VIP1) from blood cells of the vanadium-rich ascidian Ascidia sydneiensis samea.

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    Ueki, Tatsuya; Shintaku, Koki; Yonekawa, Yuki; Takatsu, Nariaki; Yamada, Hiroshi; Hamada, Toshiyuki; Hirota, Hiroshi; Michibata, Hitoshi

    2007-06-01

    Several species of ascidians, the so-called tunicates, accumulate extremely high levels of vanadium ions in their blood cells. We previously identified a family of vanadium-binding proteins, named Vanabins, from blood cells and blood plasma of a vanadium-rich ascidian, Ascidia sydneiensis samea. The 3-dimensional structure of Vanabin2, the predominant vanadium-binding protein in blood cells, has been revealed, and the vanadium-binding properties of Vanabin2 have been studied in detail. Here, we used Far Western blotting to identify a novel protein that interacts with Vanabin2 from a blood cell cDNA library. The protein, named Vanabin-interacting protein 1 (VIP1), was localized in the cytoplasm of signet ring cells and giant cells. Using a two-hybrid method, we revealed that VIP1 interacted with Vanabins 1, 2, 3, and 4 but not with Vanabin P. The N-terminal domain of VIP1 was shown to be important for the interaction. Further, Vanabin1 was found to interact with all of the other Vanabins. These results suggest that VIP1 and Vanabin1 act as metal chaperones or target proteins in vanadocytes.

  14. Eye ontogeny in Pleurodema bufoninum: A comparison with Pleurodema somuncurense (Anura, Leptodactylidae).

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    Volonteri, Clara; Barrasso, Diego A; Cotichelli, Leonardo; Basso, Néstor G; Hermida, Gladys N

    2017-07-01

    Vision is one of the main sensory systems in amphibians, and the eye structure is highly associated with habitat conditions. The ontogeny, as well as the adult structure, of the eye has been studied in only a few species. The life change after metamorphosis is accompanied by changes in the visual environment. The aim of this work is to describe the eye ontogeny of Pleurodema bufoninum and to compare it with that of Pleurodema somuncurense. Specimens of both Pleurodema species were processed for histology analysis at different stages of development, including the tadpole, postmetamorphic, and adult forms. Eyes in both Pleurodema species are composed of the 3 tunics, tunica fibrosa, tunica vasculosa, and tunica interna, and the lens. Additionally, in both, the iris presents a projection on its dorsal and ventral free ends that screens the cornea. This structure has been reported in the eye of several anuran species and is called the umbraculum, meniscus or pupillary nodule. Our results show that the structures related to light capture (retina and lens) appear early in larval life, while the components of the terrestrial-life eye (scleral cartilage, specialized cornea, eyelids, nictitating membrane, and Harderian's gland) do not develop until the metamorphic climax, when the tadpole leaves the water. The adult eyes of P. bufoninum and P. somuncurense are very similar in structure and development. © 2017 Wiley Periodicals, Inc.

  15. Gonadotropin-releasing hormone in mulberry cells of Saccoglossus and Ptychodera (Hemichordata: Enteropneusta).

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    Cameron, C B; Mackie, G O; Powell, J F; Lescheid, D W; Sherwood, N M

    1999-04-01

    Mulberry cells are epidermal gland cells bearing a long basal process resembling a neurite and are tentatively regarded as neurosecretory cells. They occur scattered through the ectoderm of the proboscis, collar, and anterior trunk regions of the acorn worms Saccoglossus, usually in association with concentrations of nervous tissue. They contain secretion granules that appear from electron micrographs to be released to the exterior. The granules are immunoreactive with antisera raised against mammalian and salmon gonadotropin-releasing hormone (GnRH). Similar results were obtained with another enteropneust, Ptychodera bahamensis, using antisera raised against tunicate-1 and mammalian GnRH. Mulberry cells were not found in either Cephalodiscus or Rhabdopleura (Hemichordata: Pterobranchia). Extracts of tissues from 4200 Saccoglossus contain an area of immunoreactive GnRH that is detected by an antiserum raised against lamprey GnRH when characterized by high-performance liquid chromatography and radioimmunoassay. This is the first report of the occurrence of GnRH in hemichordates, probably the most primitive group clearly belonging to the chordate lineage. The physiological function of GnRH in enteropneusts is unknown, but an exocrine function appears more likely than an endocrine or neurotransmitter role. Copyright 1999 Academic Press.

  16. Virtuous colours for Mary. Identification of lapis lazuli, smalt and cochineal in the Andean colonial image of Our Lady of Copacabana (Bolivia)

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    Tomasini, Eugenia P.; Marte, Fernando; Careaga, Valeria P.; Landa, Carlos Rúa; Siracusano, Gabriela

    2016-01-01

    The image of Our Lady of Copacabana, a gilded polychrome sculpture carved in maguey wood in 1583, is one of the most important devotions in the Americas. In former research, we have identified the use of gypsum, Armenian bole, cerussite and atacamite in its polychromy. In this study, a red sample taken from the Virgin's tunic and a blue sample extracted from the cloak have been analysed with the aim to identify both pigments and offer insights into the painting technique. Analysis by micro-Raman spectroscopy complemented with scanning electron microscopy–energy dispersive spectroscopy and high-performance liquid chromatography allowed the identification of carmine lake in the red sample. Analysis by micro-Raman spectroscopy of the surface of the blue sample and its cross section showed the presence of smalt—the blue-glass pigment—over a cerussite layer, bathed by a very thin ultramarine layer—from a probable native origin—following a pictorial tradition that would last even until the eighteenth century. This is the first time that lapis lazuli has been scientifically identified in a Spanish American colonial painted layer. This article is part of the themed issue ‘Raman spectroscopy in art and archaeology’. PMID:27799431

  17. Distribution of Oikopleura dioica (Tunicata, Appendicularia associated with a coastal frontal system (39°- 41°S of the SW Atlantic Ocean in the spawning area of Engraulis anchoita anchovy

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    Mariela Spinelli

    2013-06-01

    Full Text Available Among tunicates, the small planktonic appendicularians generally comprise a significant fraction of the mesozooplankton in frontal systems. The summer 2011 distribution (vertical and spatial of Oikopleura dioica was studied in terms of abundance, biomass, estimation of egg production and population structure in the different sectors of the El Rincón coastal front, in the light of thermal and salinity gradients. Peaks of abundance of Engraulis anchoita larvae were compared to O. dioica patterns. Samples were collected with plankton nets of 67 µm and 200 µm at two layers, below and above the thermocline depth. CTD data profiles were also recorded. During this campaign high salinity waters were predominant in the estuarine area. Conversely, a thermal stratification was found, being more marked at the external stations of the front where the highest densities and biomass of O. dioica coincided with the highest E. anchoita larvae densities. The size structure of O. dioica was also associated with the thermal gradient. The smaller sizes were found in the homogeneous area at the coast where the temperature was higher around 22ºC. This front constitutes a suitable environment for O. dioica reproduction enhancing the survival rate and growth of several small pelagic fishes such as E. anchoita.

  18. DIAGNOSTICS AND TREATMENT OF EXCRETORY DEFICIENCY OF PANCREAS IN CHILDREN

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    S.V. Bel’mer

    2009-01-01

    Full Text Available Excretory pancreatic insufficiency is relatively frequent pathology in pediatric and therapeutic practice. It can be divided to primary and secondary, inborn and acquired, absolute and relative one. The causes of primary pancreatic insufficiency are agenesia or hypoplasia of pancreas, cystic fibrosis, Shwachman–Diamond syndrome. Secondary excretory pancreatic insufficiency can be caused by resection of pancreas, pancreatitis, pathology of mucous tunic of small intestine, abnormality of antitrypsinactivation with enterokinase deficiency, inactivation of enzymes by acid of duodenal contents in the presence of gastric hyper secretion and others. Excretory pancreatic deficiency has determined clinical signs and can be relatively easily diagnosed by simple laboratory methods: coprogramm and detection of elastase 1 in stool. The ways of its correction are determined by causes of disease, but modern high-active pancreatic enzymes medications must be necessary component of treatment in all cases.Key words: children, pancreatic insufficiency, celiac disease, pancreatic enzymes medications.(Voprosy sovremennoi pediatrii — Current Pediatrics. 2009;8(2:114-118

  19. Natural cleaning of the black-lip pearl oyster Pinctada margaritifera by butterflyfishes (Chaetodon) in French Polynesia

    Science.gov (United States)

    Bertucci, Frédéric; Legraverant, Yohann; Berthe, Cécile; Brooker, Rohan M.; Lo, Cédrik; Lecchini, David

    2016-12-01

    Biofouling increases the operational and economic costs associated with pearl production. As current procedures for reducing oyster biofouling can be detrimental to survival and growth and may pollute the surrounding environment developing alternative, biologically-mediated, methods could potentially increase both production and ecological sustainability. With this in mind, the present study investigated natural cleaning of black-lipped pearl oysters, Pinctada margaritifera, by butterflyfishes (Chaetodon). The feeding behaviour of six butterflyfish species was examined at Rangiroa Atoll, French Polynesia: Chaetodon auriga, Chaetodon citrinellus, Chaetodon ephippium, Chaetodon lunulatus, Chaetodon trifascialis and Chaetodon ulietensis. All species cleaned the surface of pearl oysters by removing epibionts (from 16% to 40% of total biomass), although dietary variation may explain different cleaning efficiencies. Generalist omnivores (C. auriga, C. citrinellus, C. ephippium and C. ulietensis) were the most efficient cleaners (% cleaning range: 26-40% of total biomass). Within this group, C. ephippium removed the most biomass (average of 41%) targeting algae and anemones. However, C. auriga targeted the most diverse range of epibionts, removing significant amounts of algae, sponges, tunicates, and anemones. These results suggest that foraging by butterflyfishes can substantially reduce biofouling on economically-important tropical bivalves.

  20. The ghost of fouling communities past: the effect of original community on subsequent recruitment.

    Science.gov (United States)

    Ralston, Emily A; Swain, Geoffrey W

    2014-01-01

    Biofouling on ships has been linked to the spread of invasive species, which has been identified as one of the current primary threats to the environment. Previous research on antifouling coatings suggested that the quantity of fouling, as well as community composition, on biocidal coatings was modified by prior fouling settlement. The experiment reported in this paper was designed to determine how preconditioning affected the rate and composition of subsequent fouling on transplanted silicone coatings. A series of 10 × 20 cm panels coated with Intersleek 700 or DC3140 were placed at three locations in Florida (Ponce Inlet, Sebastian Inlet, and Port of Miami), which were characterized by distinct fouling communities. Panels were immersed for four months, cleaned, and reciprocally transplanted among the three sites. Fouling community composition and coverage were characterized at bimonthly intervals both before and after transplantation. The original fouling community affected the subsequent fouling composition and recolonization by tunicates, sea anemones, barnacles, sponges, hydroids, and arborescent bryozoans. The community-level effects were short-term, lasting 2-4 months, but specific responses lasted up to 14 months post-transplant.

  1. Biofouling on artificial substrata in Muscat waters

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    Sergey Dobretsov

    2015-01-01

    Full Text Available Macro-fouling communities developed on acrylic, aluminum, wood and fiberglass panels were investigated after 4 months exposure in Marina Bandar al Rawdah and Marina Shangri La. Wet weight of biofouling was about 2-fold higher in Marina Bandar Rawdah and different communities were formed on the front and back sides of the panels. Differences between communities on different materials were less pronounced. In the second study, wet weight and community composition of macro-fouling communities on ceramic tiles at the depth of 1 m and 5 m in Marina Bandar al Rawdah were investigated. During 2008 – 2010, there were no differences between biomass of communities, while in 2011 biomass of macro-fouling was higher on tiles at 5 m. In December 2008 the minimal weight (0 kg/m2 and in September 2011 the maximal weight (26.3 kg/m2 of macro-fouling communities were recorded. In total, 27 invertebrate fouling species were found, which mostly (33% belonged to phylum Ectoprocta. Three invasive bryozoan (Bugula neritina, Zoobotryon verticillatum and Schizoporella errata and one invasive tunicate (Ciona intestinalis species were observed. Overall, this study indicates high biofouling pressure in Muscat marinas and suggests necessity of future studies of fouling communities in Oman waters.

  2. Pituitary adenylate cyclase-activating peptide (PACAP) and PAC1 receptor in the testis of cartilaginous fish Torpedo marmorata: A molecular and phylogenetic study.

    Science.gov (United States)

    Agnese, Marisa; Valiante, Salvatore; Rosati, Luigi; Andreuccetti, Piero; Prisco, Marina

    2016-01-01

    The role of PACAP in spermatogenesis and steroidogenesis has been largely investigated in last years in mammals; conversely, a few studies have been performed in non mammalian vertebrates. In this paper we investigated the sequence, expression and localization of PACAP and its PAC1 receptor in the testis of the benthic elasmobranch Torpedo marmorata, the marbled electric ray. Cloning a partial PACAP cDNA, we demonstrated for the first time in elasmobranches that PACAP shows a highly conserved sequence, compared with the PACAP of other chordates (tunicates and vertebrates). Moreover, the phylogenetic analysis revealed that PACAP has been well preserved during evolution and that a negative selection acts on PACAP sequence, leading to the conservation of the coding sites. The phylogenetic consensus tree showed also that Torpedo PACAP is more related with the amphibian PACAP than with the teleost one. Finally, we demonstrated that in T. marmorata PACAP and its PAC1 receptor are synthesized directly in the testis, where they show a wider localization than mammals, suggesting that this neuropeptide is involved in the control of Torpedo spermatogenesis. Copyright © 2015 Elsevier Inc. All rights reserved.

  3. tRNA Modification and Genetic Code Variations in Animal Mitochondria

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    Kimitsuna Watanabe

    2011-01-01

    Full Text Available In animal mitochondria, six codons have been known as nonuniversal genetic codes, which vary in the course of animal evolution. They are UGA (termination codon in the universal genetic code changes to Trp codon in all animal mitochondria, AUA (Ile to Met in most metazoan mitochondria, AAA (Lys to Asn in echinoderm and some platyhelminth mitochondria, AGA/AGG (Arg to Ser in most invertebrate, Arg to Gly in tunicate, and Arg to termination in vertebrate mitochondria, and UAA (termination to Tyr in a planaria and a nematode mitochondria, but conclusive evidence is lacking in this case. We have elucidated that the anticodons of tRNAs deciphering these nonuniversal codons (tRNATrp for UGA, tRNAMet for AUA, tRNAAsn for AAA, and tRNASer and tRNAGly for AGA/AGG are all modified; tRNATrp has 5-carboxymethylaminomethyluridine or 5-taurinomethyluridine, tRNAMet has 5-formylcytidine or 5-taurinomethyluridine, tRNASer has 7-methylguanosine and tRNAGly has 5-taurinomethyluridine in their anticodon wobble position, and tRNAAsn has pseudouridine in the anticodon second position. This review aims to clarify the structural relationship between these nonuniversal codons and the corresponding tRNA anticodons including modified nucleosides and to speculate on the possible mechanisms for explaining the evolutional changes of these nonuniversal codons in the course of animal evolution.

  4. [Sexual injuries during consensual sexual activity].

    Science.gov (United States)

    Savaş, Aysun; Efesoy, Ozan; Cayan, Filiz; Cayan, Selahittin

    2012-11-01

    The aim of this study was to retrospectively evaluate sexual injury treated in our clinic. We evaluated the results of 31 patients (17 males, 14 females; mean age 31,97±11,64; range 18 to 60 years) with sexual injury during consensual sexual activity, who presented to the emergency department between January 2004 and December 2010. Patients' age, etiology of injury, time passed since trauma, physical/operative examination results, type of treatment, duration of hospitalization, and postoperative complications were investigated. Sexual injury occurred in women as vaginal laceration and in man as penile fracture. All of the cases were treated with early surgical repair. Vaginal injuries were formed in virginal girls during the first sexual intercourse. Cases usually complained of vaginal pain and then bleeding during sexual activity. The commonest site of injury was the posterior vaginal fornix. Etiology of penile fracture was sexual intercourse and masturbation. Sudden pain in the penis, edema, color change, and sudden detumescence were the main complaints. Eleven patients had right, 5 had left and 1 had bilateral tunical ruptures, with defects of 0.5-3 cm in length. The patient with bilateral injury had accompanying incomplete urethral rupture. Sexual injury can be diagnosed effectively based on history and physical examination, and may be treated successfully with early surgical procedure.

  5. [Esophageal wall structure in people of elderly and senile age].

    Science.gov (United States)

    aminova, G G; Grigorenko, D E; Sapin, M R; Mkhitarov, V A

    2014-01-01

    Using histological methods, the esophageal wall structure and the cytoarchitectonics of mucous membrane were studied in the individuals of elderly (n = 5) and senile (n = 10) age. The control group included the individuals of I (n = 3) and II (n = 3) periods of mature age. It was demonstrated that with advancing age in most cases the destructive processes took place in the epithelium (delamination of the layer, separation of large fragments, formation of microerosions etc.) in most of the studied cases. Lymphocytes, neutrophils and eosinophils were found between the epithelial cells; the numbers of infiltrating cells was increased 2-3 times during aging. Mucosal lamina propria and the submucosa, in particular, were characterized by the thickening of the bundles of collagen fibers. A two-fold increase in the number of the cells of the fibroblast lineage was found. The number of leukocytes in the lamina propria was increased by the eldery age in the upper and lower parts of the esophagus (3.5 and 1.75 times respectively). The changes in lamina muscularis were manifested by its thinning, delamination and myocyte dissociation. Remodeling of the muscular tunic was less pronounced. The degree of changes increased distally and varied widely depending on the individual peculiarities.

  6. Spatial variations of growth within domes having different patterns of principal growth directions

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    Jerzy Nakielski

    2014-01-01

    Full Text Available Growth rate variations for two paraboloidal domes: A and B, identical when seen from the outside but differing in the internal pattern of principal growth directions, were modeled by means of the growth tensor and a natural coordinate system. In dome A periclinal trajectories in the axial plane were given by confocal parabolas (as in a tunical dome, in dome B by parabolas converging to the vertex (as in a dome without a tunica. Accordingly, two natural coordinate systems, namely paraboloidal for A and convergent parabolic for B, were used. In both cases, the rate of growth in area on the surfaces of domes was assumed to be isotropic and identical in corresponding points. It appears that distributions of growth rates within domes A and B are similar in their peripheral and central parts and different only in their distal regions. In the latter, growth rates are relatively large; the maximum relative rate of growth in volume is around the geometric focus in dome A, and on the surface around the vertex in dome B.

  7. Hallazgo de una escultura romana en las proximidades del manantial de aguas termales de Alhama de Almería

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    Juana María Rodríguez López

    1992-01-01

    Full Text Available El hallazgo ocasional de una escultura romana acéfala en las proximidades del antiguo emplazamiento de los baños de Alhama de Almería suscita cuestiones de interés sobre el uso de sus aguas termales en la Antigüedad y su continuación en la Edad Media. Se trata de una pequeña escultura femenina que viste túnica con cinto y manto. Caracterizada por el hieratismo frontal, parece corresponder al siglo ii d.C. La materia prima, según un análisis macroscópico contrastado, es mármol «blanco de Macael», documentado hasta ahora sólo para fábricas edilicias, pero no en la estatuaria.The accidental discovery of a Román headless sculpture in the proximity of the oíd setting of the baths in Alhama de Almería arises interesting questions about the use of their thermal waters in Ancient times and its continity in the IVIiddIe Ages. It's a little female sculpture wearing a tunic cuitu a beit and a gown. Being its main feature a frontal hieratism, it seems to belong to II century A.D. The raw material, according to a macroscopic and contrasted analysis, is white marbie from Macael, known up to now only in civil constructions but not in sculptures.

  8. Reproductive biology and diet of Mustelus punctulatus (Risso, 1826 (Chondrichthyes: Triakidae from the Gulf of Gabès, central Mediterranean Sea

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    Bechir Saïdi

    2009-06-01

    Full Text Available Specimens of Mustelus punctulatus were collected between January 2002 and December 2005 from commercial fisheries in the Gulf of Gabès (central Mediterranean Sea. Males and females reached a maximum total length (TL of 111 and 122 cm respectively. Males matured between 76 and 88.5 cm TL, with a size at maturity (TL50 of 81.4 cm TL. Females matured between 88 and 100 cm TL with a TL50 of 95.6 cm. Females had an annual reproductive cycle. Mating occurred through late-May and June. Ovulation occurred from early July to mid-August with parturition occurring from mid-May to early June, after a gestation period of 11 months. The size at birth was estimated to be 24.5 to 30.5 cm TL. Positive linear relationships were detected between the TL of mature females and ovarian and uterine fecundities. Mustelus punctulatus is an opportunistic predator that consumes a wide range of demersal and benthic prey items. It preys mainly on crustaceans, teleosts and molluscs. Polychaetes, sipunculids, echinoderms and tunicates are also consumed. The species change their main food item as they grow, from crustaceans to teleosts then to molluscs.

  9. Invertebrates as model organisms for research on aging biology.

    Science.gov (United States)

    Murthy, Mahadev; Ram, Jeffrey L

    2015-01-30

    Invertebrate model systems, such as nematodes and fruit flies, have provided valuable information about the genetics and cellular biology involved in aging. However, limitations of these simple, genetically tractable organisms suggest the need for other model systems, some of them invertebrate, to facilitate further advances in the understanding of mechanisms of aging and longevity in mammals, including humans. This paper introduces 10 review articles about the use of invertebrate model systems for the study of aging by authors who participated in an 'NIA-NIH symposium on aging in invertebrate model systems' at the 2013 International Congress for Invertebrate Reproduction and Development. In contrast to the highly derived characteristics of nematodes and fruit flies as members of the superphylum Ecdysozoa, cnidarians, such as Hydra, are more 'basal' organisms that have a greater number of genetic orthologs in common with humans. Moreover, some other new model systems, such as the urochordate Botryllus schlosseri , the tunicate Ciona , and the sea urchins (Echinodermata) are members of the Deuterostomia, the same superphylum that includes all vertebrates, and thus have mechanisms that are likely to be more closely related to those occurring in humans. Additional characteristics of these new model systems, such as the recent development of new molecular and genetic tools and a more similar pattern to humans of regeneration and stem cell function suggest that these new model systems may have unique advantages for the study of mechanisms of aging and longevity.

  10. Identifiation of Phymatolithon lamii (Me. Lemoine Y.M. Chamberlain 1991 following bleaching in the upper intertidal zone of the Minas Basin, Nova Scotia, Canada

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    Brady Keith Quinn

    2016-03-01

    Full Text Available Objective: To identify an unusual encrusting calcareous organism found growing on upper intertidal rocks along the coast of the Minas Basin, Nova Scotia, Canada, which was thought to potentially represent a new, perhaps invasive species to the area. Methods: Observations were made of the organism growing in situ and of intact and dissected specimens under microscopes in the laboratory. Taxonomic keys were used to determine probable identity of the organism as a tunicate, sponge, bryozoan, marine lichen, or coralline red alga. These keys were then further used to identify samples to species. Results: The organism was determined to be Phymatolithon lamii (Me. Lemoine Y.M. Chamberlain 1991, an encrusting coralline red alga native to the study region. This species normally occurs in the subtidal zone, so its occurrence in the high intertidal zone was unusual and resulted in the alga becoming bleached and taking on an unusual appearance. Conclusions: The sample did not represent a new or invasive species to the study area. However, occurrence of this species on the high intertidal zone was novel and may have resulted from unusual climatic and/or oceanographic conditions in the study area in 2015 that allowed this alga to settle and grow in the intertidal zone for a time before death and bleaching occurred. Events such as this resulting from climate change may negatively impact recruitment to populations of coastal marine species and should be investigated further.

  11. Update of alien fauna and new records from Tunisian marine waters

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    K. OUNIFI- BEN AMOR

    2015-01-01

    Full Text Available An updated inventory of alien marine fauna in coastal and offshore Tunisian waters is presented. Records were compiled from scientific and ‘grey’ publications, presentations at scientific meetings, theses presented in fulfillment of requirements towards MSc and PhD degrees, websites and personal observations. 136 alien species were recorded in Tunisian waters, 60 records in northern coasts, West Mediterranean and 76 in central and southern coasts, Central Mediterranean. Nearly half of the first sightings in Tunisian waters took place in the Gulf of Gabès. The dominant taxa are Crustancean (24%, Molluscs (23%, Fishes (19% and Annelida (13%. Twenty one species previously reported as aliens, were upon consideration, reclassified as range-expanding Atlantic species. Amathia verticillata, previously considered native to the Mediterranean, is reclassified as pseudoindigenous. Twenty one alien species are newly recorded from Tunisia, including 5 fish species, 5 polychaetes, 4 crustaceans, 4 molluscs, and one each schyphozoan, bryozoan and tunicate. The findings of Gibberulus gibberulus albus, Morula aspera and Calcinus latens, three species new to the Mediterranean, and of Actaedoes tomentosus, reported for the second time in the basin, are described. Species were classified according to their establishment status and their origins. This contribution highlights the dual origin of biological invasion in Tunisian waters (Red Sea and Atlantic, with slightly more species of Red Sea and Indo-Pacific origin (61,76%.  The impact of the alien species in Tunisian waters was discussed.

  12. Development of an experimental model of pemphigus vulgaris in laboratory animals

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    A. A. Kubanov

    2015-01-01

    Full Text Available Pemphigus vulgaris is a chronic autoimmune bullous disease characterized by the formation of blisters on the skin and/ or mucous tunics as a result of acantholysis. To search for new molecular and biological targets, study pathogenetic mechanisms of the disease development and develop new methods of treatment, it is urgent to create an experimental model of pemphigus in laboratory animals reproducing clinical, histological and immunological signs of pemphigus. Goal of the study. To develop an experimental model of pemphigus by injecting IgG produced from the blood serum taken from patients with pemphigus to neonatal mice of the BALB/c inbred line. Results. Accumulated IgG products taken from patients with pemphigus (main groups and healthy volunteers (control group were injected intraperitoneally to neonatal mice of the BALB/с in the doses of 10-30 mg per mouse. Clinical, histological and immunomorphological signs of pemphigus were revealed in the mice from the main group, which received intraperitoneal injections of IgG taken from patients with pemphigus in the dose of 30 mg per mouse. No signs of pemphigus were observed in the mice from the control group, which received injections of IgG taken from healthy people. This study confirms the role of pemphigus autoantibodies in the pathogenesis of pemphigus vulgaris and shows that passive transmission of antibodies to laboratory animals is possible.

  13. Two Rounds of Whole Genome Duplication in the AncestralVertebrate

    Energy Technology Data Exchange (ETDEWEB)

    Dehal, Paramvir; Boore, Jeffrey L.

    2005-04-12

    The hypothesis that the relatively large and complex vertebrate genome was created by two ancient, whole genome duplications has been hotly debated, but remains unresolved. We reconstructed the evolutionary relationships of all gene families from the complete gene sets of a tunicate, fish, mouse, and human, then determined when each gene duplicated relative to the evolutionary tree of the organisms. We confirmed the results of earlier studies that there remains little signal of these events in numbers of duplicated genes, gene tree topology, or the number of genes per multigene family. However, when we plotted the genomic map positions of only the subset of paralogous genes that were duplicated prior to the fish-tetrapod split, their global physical organization provides unmistakable evidence of two distinct genome duplication events early in vertebrate evolution indicated by clear patterns of 4-way paralogous regions covering a large part of the human genome. Our results highlight the potential for these large-scale genomic events to have driven the evolutionary success of the vertebrate lineage.

  14. DNA barcoding of a colonial ascidian, Lissoclinum fragile (Van Name, 1902).

    Science.gov (United States)

    H Abdul, Jaffarali; Akram, Soban; Arshan, Kaleem M L

    2017-11-01

    Ascidians (tunicates) are marine benthic organisms possessing various pharmacological activities, including anti-oxidant, anti-tumour, antimicrobial, etc. They also play a key role as model organisms to study various neurobehavioral disorders. Ascidian diversity is reportedly less in India due to lack of taxonomists as well as the limitations in morphology based taxonomy. Molecular taxonomy, comprising the sequencing of cytochrome c oxidase 1 gene (barcode region) otherwise known as DNA barcoding reduces these bottlenecks. Since several species of the family Didemnidae closely resemble in morphology, the present study was aimed to develop DNA barcodes of a colonial ascidian, Lissoclinum fragile belonging to the family Didemnidae. CO1 gene of L. fragile from Thoothukudi, Mandapam, and Vizhinjam waters were sequenced and submitted in GenBank, NCBI through Barcode submission tool. BLAST results showed maximum identity (97-100%) for L. fragile collected from different stations. The pairwise genetic distances within species and genera were calculated using Kimura two parameter (K2P) and the phylogenetic tree was constructed using Neighbour-Joining Tree.

  15. Biometric and Ultrasonographic Evaluation of the Testis of One-humped Camel (Camelus dromedarius

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    Riaz Hussain Pasha, Anas Sarwar Qureshi*, Laeeq Akbar Lodhi1 and Huma Jamil1

    2011-04-01

    Full Text Available Twenty four adult clinically healthy one-humped male camels (Camelus dromedarius were examined three times (beginning, mid and end in each season (winter, spring, summer and autumn for establishing the normal ultrasonic appearance and seasonal changes in the testicular parenchyma in the natural ecology of Punjab, Pakistan. The testes of each camel were scanned by using a B-mode real time ultrasound scanner fitted with a 7.5-MHz linear-array transducer. Scrotal biometry was done with the measuring tape during all the seasons of year. The tunics of the testes appeared as hyperechoic lines surrounding the homogenous, moderately echogenic parenchyma of the testis. The mediastinum testis was visualized as hyperechoic central line and a spot, in longitudinal and transverse sections, respectively. During winter season, the parenchyma was hyperechoic and mediastinum testis was seen as thin hyperechoic line. In spring, the echogenicity of parenchyma was moderate and mediastinum appeared relatively thick central hyperechoic line. In summer and autumn, less echoic parenchyma and thick band of mediastinum was recorded. Biometric studies showed significantly (P<0.01 higher scrotal length and width of the testis during winter and spring season as compared to summer and autumn. Present study revealed that the ultrasonic structure of camel testis resembles other mammals and season has an apparent effect on the testicular size and echogenicity of the testicular parenchyma in the one-humped camel.

  16. Twelve invertebrate and eight fish species new to the marine fauna of Madeira, and a discussion of the zoogeography of the area

    Science.gov (United States)

    Wirtz, Peter

    1998-06-01

    The benthic ctenophore Vallicula multiformis, a large undescribed flatworm species of the genus Pseudoceros, the prosobranch gastropod Tonna maculosa, the opisthobranch gastropods Placida cf. dendritica, Caloria elegans, Aeolidiella sanguinea, Janolus cristatus, the decapod Balssia gasti, the sea urchin Schizaster canaliferus and the tunicates Clavelina lepadiformis, Clavelina dellavallei and Pycnoclavella taureanensis are recorded from Madeira for the first time. This is the first record of a platyctenid ctenophore in the eastern Atlantic. The teleost fishes Pomatoschistus pictus, Vaneaugobius canariensis, Chromogobius sp., Nerophis ophidion, Hippocampus hippocampus, Acanthocybium solandri, Sphyraena viridensis and Sphyraena barracuda are recorded from Madeira for the first time. The presence of the sea-hare Aplysia dactylomela at Madeira is confirmed; the species has increased tremendously in abundance in the last four years. The crocodile fish Grammoplites gruveli can occasionally be found in the mantle cavity of cuttlefish ( Sepia officinalis) sold at the fish market of Funchal, but does not originate from Madeiran waters. An analysis of 100 new records from the coastal fauna of Madeira shows that, while predominantly of lusitanian, mediterranean and mauritanian affinity, Madeira’s shallow water fauna contains a large component of tropical species.

  17. Long-Term Relationships between the Marine Environment, Krill and Salps in the Southern Ocean

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    Chung Il Lee

    2010-01-01

    Full Text Available Long-term variations (1975–2002 in climatology of marine environmental parameters, Antarctic krill, Euphausia superba, and the pelagic tunicate, Salpa thompsoni, were compared within the Atlantic Sector of the Southern Ocean. Sea water temperature in the top 400 m increased at a rate of 0.020–0.030°C ⋅ yr−1, which was accompanied by the dissolved oxygen decline. Top 100 m water layer became fresher with lower concentrations of phosphates and nitrates, while at subsurface layers (200–400 m both salinity and nutrients showed small increasing trend. Unlike phosphates and nitrates, silicate concentrations decreased in the entire water column. Shorter-term water temperature dynamics closely correlated with the El Nino events expressed as the Southern Oscillation Index which in turn was linked to the propagation of the Antarctic Circumpolar Wave (ACW. The variations of sea-ice extent matched well the changes in both air and water temperatures. In general, abundance of krill and salps showed opposite to each other trends. Due to large area considered in this study, no significant relationships between abiotic factors and both krill and salps were found. However, our analysis demonstrated that krill abundance was greater in years with lower sea water temperature, greater sea-ice extent and higher nutrient concentration, while salps showed the opposite pattern.

  18. Secondary metabolites from marine microorganisms

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    KELECOM ALPHONSE

    2002-01-01

    Full Text Available After 40 years of intensive research, chemistry of marine natural products has become a mature field. Since 1995, there are signals of decreased interest in the search of new metabolites from traditional sources such as macroalgae and octocorals, and the number of annual reports on marine sponges stabilized. On the contrary, metabolites from microorganisms is a rapidly growing field, due, at least in part, to the suspicion that a number of metabolites obtained from algae and invertebrates may be produced by associated microorganisms. Studies are concerned with bacteria and fungi, isolated from seawater, sediments, algae, fish and mainly from marine invertebrates such as sponges, mollusks, tunicates, coelenterates and crustaceans. Although it is still to early to define tendencies, it may be stated that the metabolites from microorganisms are in most cases quite different from those produced by the invertebrate hosts. Nitrogenated metabolites predominate over acetate derivatives, and terpenes are uncommon. Among the latter, sesquiterpenes, diterpenes and carotenes have been isolated; among nitrogenated metabolites, amides, cyclic peptides and indole alkaloids predominate.

  19. Bionanocomposites: differential effects of cellulose nanocrystals on protein diblock copolymers.

    Science.gov (United States)

    Haghpanah, Jennifer S; Tu, Raymond; Da Silva, Sandra; Yan, Deng; Mueller, Silvana; Weder, Christoph; Foster, E Johan; Sacui, Iulia; Gilman, Jeffery W; Montclare, Jin Kim

    2013-12-09

    We investigate the effects of mixing a colloidal suspension of tunicate-derived cellulose nanocrystals (t-CNCs) with aqueous colloidal suspensions of two protein diblock copolymers, EC and CE, which bear two different self-assembling domains (SADs) derived from elastin (E) and the coiled-coil region of cartilage oligomeric matrix protein (C). The resulting aqueous mixtures reveal improved mechanical integrity for the CE+t-CNC mixture, which exhibits an elastic gel network. This is in contrast to EC+t-CNC, which does not form a gel, indicating that block orientation influences the ability to interact with t-CNCs. Surface analysis and interfacial characterization indicate that the differential mechanical properties of the two samples are due to the prevalent display of the E domain by CE, which interacts more with t-CNCs leading to a stronger network with t-CNCs. On the other hand, EC, which is predominantly C-rich on its surface, does not interact as much with t-CNCs. This suggests that the surface characteristics of the protein polymers, due to folding and self-assembly, are important factors for the interactions with t-CNCs, and a significant influence on the overall mechanical properties. These results have interesting implications for the understanding of cellulose hydrophobic interactions, natural biomaterials and the development of artificially assembled bionanocomposites.

  20. MRI of penile fracture: diagnosis and therapeutic follow-up

    Energy Technology Data Exchange (ETDEWEB)

    Uder, Michael; Gohl, Dietrich; Takahashi, Masahide; Kramann, Bernhard; Schneider, Guenther [Universitaet des Saarlandes, Homburg/Saar (Germany). Radiologische Klinik; Derouet, Harry [Universitaet des Saarlandes, Homburg/Saar (Germany). Urologische Klinik; Defreyne, Luc [Department of Radiology and Medical Imaging, University Hospital of Gent (Belgium)

    2002-01-01

    A rupture of corpus cavernosum (CC) is a rare injury of the erect penis. The present study describes the role of MRI for diagnosis and follow-up of this injury. Four patients with clinically suspected acute penile fractures underwent MRI. Imaging findings were confirmed at surgery. In three patients, follow-up MRI was also available at 1, 6 and 16 weeks after surgical repair. In all patients pre-contrast T1-weighted images (T1WI) clearly disclosed ruptures of CC, which depicted as discontinuity of low signal intensity of the tunica albuginea (TA). Concomitant subcutaneous haematoma were well visualised both on T1-weighted (T1WI) and T2-weighted images, whereas haematoma in CC were optimally demonstrated on contrast-enhanced T1WI. On follow-up MRI all fractures presented similar healing process. Shortly after the repair, the tunical suture showed an increase in signal intensity on pre-contrast T1WI and was strongly enhanced with the administration of contrast material. Then the tear site gradually recovered low signal intensity on all spin-echo sequences by 4 months after surgery. These serial findings may suggest the formation of vascularised granulation tissue during cicatrisation. Magnetic resonance imaging is of great value for the diagnosis and follow-up in patients with penile fracture. (orig.)

  1. The transcriptome of an amphioxus, Asymmetron lucayanum, from the Bahamas: a window into chordate evolution.

    Science.gov (United States)

    Yue, Jia-Xing; Yu, Jr-Kai; Putnam, Nicholas H; Holland, Linda Z

    2014-09-19

    Cephalochordates, the sister group of tunicates plus vertebrates, have been called "living fossils" due to their resemblance to fossil chordates from Cambrian strata. The genome of the cephalochordate Branchiostoma floridae shares remarkable synteny with vertebrates and is free from whole-genome duplication. We performed RNA sequencing from larvae and adults of Asymmetron lucayanum, a cephalochordate distantly related to B. floridae. Comparisons of about 430 orthologous gene groups among both cephalochordates and 10 vertebrates using an echinoderm, a hemichordate, and a mollusk as outgroups showed that cephalochordates are evolving more slowly than the slowest evolving vertebrate known (the elephant shark), with A. lucayanum evolving even more slowly than B. floridae. Against this background of slow evolution, some genes, notably several involved in innate immunity, stand out as evolving relatively quickly. This may be due to the lack of an adaptive immune system and the relatively high levels of bacteria in the inshore waters cephalochordates inhabit. Molecular dating analysis including several time constraints revealed a divergence time of ∼120 Ma for A. lucayanum and B. floridae. The divisions between cephalochordates and vertebrates, and that between chordates and the hemichordate plus echinoderm clade likely occurred before the Cambrian. © The Author(s) 2014. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

  2. Genome-wide single nucleotide polymorphisms (SNPs) for a model invasive ascidian Botryllus schlosseri.

    Science.gov (United States)

    Gao, Yangchun; Li, Shiguo; Zhan, Aibin

    2018-04-01

    Invasive species cause huge damages to ecology, environment and economy globally. The comprehensive understanding of invasion mechanisms, particularly genetic bases of micro-evolutionary processes responsible for invasion success, is essential for reducing potential damages caused by invasive species. The golden star tunicate, Botryllus schlosseri, has become a model species in invasion biology, mainly owing to its high invasiveness nature and small well-sequenced genome. However, the genome-wide genetic markers have not been well developed in this highly invasive species, thus limiting the comprehensive understanding of genetic mechanisms of invasion success. Using restriction site-associated DNA (RAD) tag sequencing, here we developed a high-quality resource of 14,119 out of 158,821 SNPs for B. schlosseri. These SNPs were relatively evenly distributed at each chromosome. SNP annotations showed that the majority of SNPs (63.20%) were located at intergenic regions, and 21.51% and 14.58% were located at introns and exons, respectively. In addition, the potential use of the developed SNPs for population genomics studies was primarily assessed, such as the estimate of observed heterozygosity (H O ), expected heterozygosity (H E ), nucleotide diversity (π), Wright's inbreeding coefficient (F IS ) and effective population size (Ne). Our developed SNP resource would provide future studies the genome-wide genetic markers for genetic and genomic investigations, such as genetic bases of micro-evolutionary processes responsible for invasion success.

  3. Deciphering the fossil record of early bilaterian embryonic development in light of experimental taphonomy.

    Science.gov (United States)

    Gostling, Neil J; Thomas, Ceri-Wyn; Greenwood, Jenny M; Dong, Xiping; Bengtson, Stefan; Raff, Elizabeth C; Raff, Rudolf A; Degnan, Bernard M; Stampanoni, Marco; Donoghue, Philip C J

    2008-01-01

    Experimental analyses of decay in a tunicate deuterostome and three lophotrochozoans indicate that the controls on decay and preservation of embryos, identified previously based on echinoids, are more generally applicable. Four stages of decay are identified regardless of the environment of death and decay. Embryos decay rapidly in oxic and anoxic conditions, although the gross morphology of embryos is maintained for longer under anoxic conditions. Under anoxic reducing conditions, the gross morphology of the embryos is maintained for the longest period of time, compatible with the timescale required for bacterially mediated mineralization of soft tissues. All four stages of decay were encountered under all environmental conditions, matching the spectrum of preservational qualities encountered in all fossil embryo assemblages. The preservation potential of embryos of deuterostomes and lophotrochozoans is at odds with the lack of such embryos in the fossil record. Rather, the fossil record of embryos, as sparse as it is, is dominated by forms interpreted as ecdysozoans, cnidarians, and stem-metazoans. The dearth of deuterostome and lophotrochozoan embryos may be explained by the fact that ecdysozoans, at least, tend to deposit their eggs in the sediment rather than through broadcast spawning. However, fossil embryos remain very rare and the main controlling factor on their fossilization may be the unique conspiracy of environmental conditions at a couple of sites. The preponderance of fossilized embryos of direct developers should not be used in evidence against the existence of indirect development at this time in animal evolutionary history.

  4. Optimizing Corm Size and Density in Saffron (Crocus sativus L. Cultivation by Central Composite Design

    Directory of Open Access Journals (Sweden)

    Mehdi Nassiri Mahallati

    2015-10-01

    Full Text Available In order to determine the optimal use of corm size and density, an experiment was conducted by central composite design at the Research Station, the Ferdowsi University of Mashhad, Iran, during two growing seasons of 2008-2009 and 2009-2010. The treatments were designed based on low and high levels of corm size (3 and 7 g and density (50 and 150 corm.m-2. Central point in each treatment was repeated 5 times and a total of 13 experimental treatments were designed. Economic yield, corm diameter, number of daughter corms, number of mother corms, number of flowers and fresh weight of flowers were measured as dependent variables, and the response surface of these variables to experimental factors was estimated by the polynomial regression model. The results indicated a positive effect of corm size and density on economic yield, corm diameter, dry weight of tunic, number of daughter corms, number of mother corms, number of flowers and fresh weight of flowers. The optimum level of corm size and density were 7 g and 250 plant.m-2, respectively.

  5. Chitin protects the gut epithelial barrier in a protochordate model of DSS-induced colitis

    Directory of Open Access Journals (Sweden)

    Assunta Liberti

    2018-01-01

    Full Text Available The gastrointestinal tract of Ciona intestinalis, a solitary tunicate that siphon-filters water, shares similarities with its mammalian counterpart. The Ciona gut exhibits other features that are unique to protochordates, including certain immune molecules, and other characteristics, e.g. chitin-rich mucus, which appears to be more widespread than considered previously. Exposure of Ciona to dextran sulphate sodium (DSS induces a colitis-like phenotype similar to that seen in other systems, and is characterized by alteration of epithelial morphology and infiltration of blood cells into lamina propria-like regions. DSS treatment also influences the production and localization of a secreted immune molecule shown previously to co-localize to chitin-rich mucus in the gut. Resistance to DSS is enhanced by exposure to exogenous chitin microparticles, suggesting that endogenous chitin is critical to barrier integrity. Protochordates, such as Ciona, retain basic characteristics found in other more advanced chordates and can inform us of uniquely conserved signals shaping host-microbiota interactions in the absence of adaptive immunity. These simpler model systems may also reveal factors and processes that modulate recovery from colitis, the role gut microbiota play in the onset of the disease, and the rules that help govern the reestablishment and maintenance of gut homeostasis.

  6. Settlement pattern of Posidonia oceanica epibionts along a gradient of ocean acidification: an approach with mimics

    Directory of Open Access Journals (Sweden)

    L. DONNARUMMA

    2014-02-01

    Full Text Available Effects of ocean acidification (OA on the colonization/settlement pattern of the epibiont community of the leaves and rhizomesof the Mediterranean seagrass,Posidoniaoceanica, have been studied at volcanic CO2vents off Ischia (Italy, using “mimics”as artificial substrates. The experiments were conducted in shallowPosidoniastands (2-3 m depth, in three stations on the northand three on the south sides of the study area, distributed along a pH gradient. At each station, 4 rhizome mimics and 6 artificialleaves were collected every three months (Sept 2009-Sept 2010. The epibionts on both leaf and rhizome mimics showed clearchanges along the pH gradient; coralline algae and calcareous invertebrates (bryozoans, serpulid polychaetes and barnacles weredominant at control stations but progressively disappeared at the most acidified stations. In these extremely low pH sites theassemblage was dominated by filamentous algae and non calcareous taxa such as hydroids and tunicates. Settlement pattern onthe artificial leaves and rhizome mimics over time showed a consistent distribution pattern along the pH gradient and highlightedthe peak of recruitment of the various organisms in different periods according to their life history.Posidoniamimics at theacidified station showed a poor and very simplified assemblage where calcifying epibionts seemed less competitive for space. Thisprofound difference in epiphyte communities in low pH conditions suggests cascading effects on the food web of the meadow and,consequently, on the functioning of the system

  7. Hair cells in non-vertebrate models: lower chordates and molluscs.

    Science.gov (United States)

    Burighel, P; Caicci, F; Manni, L

    2011-03-01

    The study of hair cells in invertebrates is important, because it can shed light on the debated question about the evolutionary origin of vertebrate hair cells. Here, we review the morphology and significance of hair cells in two groups of invertebrates, the lower chordates (tunicates and cephalochordates) and the molluscs. These taxa possess complex mechanoreceptor organs based on both primary (sensory neurons) and/or secondary, axonless, sensory cells, bearing various apical specializations. Compared with vertebrates, these taxa show interesting examples of convergent evolution and possible homologies of sensory systems. For example, the "lateral line organ" of Octopoda and Decapoda, composed of primary sensory cells aligned on the arms and the head, is considered a classic example of convergent evolution to mechanoreception. Similarly, in ascidians, the cupular organ, formed of primary sensory cells embedded in a gelatinous cupula, is seen as an analog of neuromasts in vertebrates. However, the coronal organ of the oral siphon of ascidians, represented by a line of secondary sensory cells with a hair bundle also comprising graded stereovilli, is currently the best candidate for tracing the evolutionary origin of the vertebrate octavo-lateralis system. Several features, such as embryological origin, position, gene expression and morphology, support this hypothesis. Copyright © 2010 Elsevier B.V. All rights reserved.

  8. An anti-infective synthetic peptide with dual antimicrobial and immunomodulatory activities.

    Science.gov (United States)

    Silva, O N; de la Fuente-Núñez, C; Haney, E F; Fensterseifer, I C M; Ribeiro, S M; Porto, W F; Brown, P; Faria-Junior, C; Rezende, T M B; Moreno, S E; Lu, T K; Hancock, R E W; Franco, O L

    2016-11-02

    Antibiotic-resistant infections are predicted to kill 10 million people per year by 2050, costing the global economy $100 trillion. Therefore, there is an urgent need to develop alternative technologies. We have engineered a synthetic peptide called clavanin-MO, derived from a marine tunicate antimicrobial peptide, which exhibits potent antimicrobial and immunomodulatory properties both in vitro and in vivo. The peptide effectively killed a panel of representative bacterial strains, including multidrug-resistant hospital isolates. Antimicrobial activity of the peptide was demonstrated in animal models, reducing bacterial counts by six orders of magnitude, and contributing to infection clearance. In addition, clavanin-MO was capable of modulating innate immunity by stimulating leukocyte recruitment to the site of infection, and production of immune mediators GM-CSF, IFN-γ and MCP-1, while suppressing an excessive and potentially harmful inflammatory response by increasing synthesis of anti-inflammatory cytokines such as IL-10 and repressing the levels of pro-inflammatory cytokines IL-12 and TNF-α. Finally, treatment with the peptide protected mice against otherwise lethal infections caused by both Gram-negative and -positive drug-resistant strains. The peptide presented here directly kills bacteria and further helps resolve infections through its immune modulatory properties. Peptide anti-infective therapeutics with combined antimicrobial and immunomodulatory properties represent a new approach to treat antibiotic-resistant infections.

  9. MORPHOLOGICAL AND BIOREFLECTING CHARACTERISTICS OF TAPETUM LUCIDUM IN DOGS AND COWS

    Directory of Open Access Journals (Sweden)

    Pamela Bejdić

    2013-09-01

    Full Text Available Tapetum lucidum is the specially modifided, bio-reflecting tissue layer, which at most vertebrates covers the biggest part of the middle eye tunic, the chorioidea. Physiologically, the most important role of this layer is to reflect light which passes through the retina back to it, causing the secondary stimulation of the photoreceptors. In the dim light ambient conditions when the pupil is dilated, reflected beams of the light create the visual effect of the “animals' eyes shining in the dark“, while exiting the eyes. The aims of this study are to define bio-reflecting and morphological charachteristics of the tapetum lucidum in the dog and cow eyes. Because the tapetum lucidum is an adaptive structure of the eye on poorly illuminated environment, the results of our research indicate that the anatomy of the eye, particulary shape of the pupil, placement of the eyes on the animals' head, and diet, all affect the morphology and bio-reflecting characteristics of this structure.Key words: tapetum lucidum, eyeshine, morphology

  10. Nodular Epiescleritis Granulomatous Canine. Case Report

    Directory of Open Access Journals (Sweden)

    Camilo Guarín Patarroyo

    2011-12-01

    Full Text Available Granulomatous epiescleritis nodular disease in canines is a very unusual presentation that affects or external fibrous tunic of the eyeball and conjunctiva, which was an increase similar to a unilateral or bilateral tumor. Suspected immune-mediated disease due to lack of identification of an etiologic agent and the response to treatment with immunosuppressive drugs (Couto, 1992. The ideal therapy is the application of steroids via intralesional, topical or systemic, or other immunosuppressants such as cyclosporine and azathioprine; it is still advisable to apply antibiotic is the ideal combination of tetracycline and neomycin (Gilger & Whitley, 1999. The diagnostic method of episcleritis is made by histopathology, which is evident in changes similar to chronic granulomatous inflammation. Are claiming a racial bias in Alsatian, Shepherd Collie Shetland Shepherd, Coker Spaniel, Rottweiler and Labrador Retriever (Gough & Thomas, 2004. The following case is a report of a nodular epiescleritis affecting the cornea, sclera, and the corneoscleral limbus, which describes the diagnosis, signology and treatment.

  11. Drowned reefs and carbonate platforms: reef-community disruption by nutrients provides a clue to the paradox

    Energy Technology Data Exchange (ETDEWEB)

    Hallock, P.

    1985-01-01

    Growth rates of corals on Holocene reefs indicate that carbonate platforms should easily keep pace with long-term subsidence and sea-level changes, yet drowned reefs and platforms are common in the geologic record. Recognition of the influence of nutrients in reef communities provides a clue to that paradox. Coral reefs are ecosystems adapted to nutrient-deficient environments. Input of nitrates and phosphates stimulates growth of plankton and, in the benthos, of fleshy algae and suspension-feeding animals such as bryozoans, barnacles, boring bivalves, sponges and tunicates. These fast-growing organisms not only displace the hermatypic algae and corals that produce most of the carbonate, but many are bioeroders that actively destroy the reefal structure. Nutrient enrichment can result from either runoff or upwelling. Thus, not only are terrigenous sediments detrimental to reefs, but suppression of reef development by nutrients carried in runoff from land can extend well beyond the range of sediment influx. Understanding that increased organic productivity disrupts reefal communities and curtails carbonate production provides important new insights for paleoenvironmental interpretations. Carbonate platforms that have succumbed to upwelled nutrients may include those whose drownings coincide with times of increasing deep-ocean circulation.

  12. Pyridinoacridine alkaloids of marine origin: NMR and MS spectral data, synthesis, biosynthesis and biological activity

    Directory of Open Access Journals (Sweden)

    Louis P. Sandjo

    2015-09-01

    Full Text Available This review focuses on pyridoacridine-related metabolites as one biologically interesting group of alkaloids identified from marine sources. They are produced by marine sponges, ascidians and tunicates, and they are structurally comprised of four to eight fused rings including heterocycles. Acridine, acridone, dihydroacridine, and quinolone cores are features regularly found in these alkaloid skeletons. The lack of hydrogen atoms next to quaternary carbon atoms for two or three rings makes the chemical shift assignment a difficult task. In this regard, one of the aims of this review is the compilation of previously reported, pyridoacridine 13C NMR data. Observations have been made on the delocalization of electrons and the presence of some functional groups that lead to changes in the chemical shift of some carbon resonances. The lack of mass spectra information for these alkaloids due to the compactness of their structures is further discussed. Moreover, the biosynthetic pathways of some of these metabolites have been shown since they could inspire biomimetic synthesis. The synthesis routes used to prepare members of these marine alkaloids (as well as their analogues, which are synthesized for biological purposes are also discussed. Pyridoacridines were found to have a large spectrum of bioactivity and this review highlights and compares the pharmacophores that are responsible for the observed bioactivity.

  13. “Interpretation of garb…”. The history and symbolism of the Carmelite habit in Polish convents

    Directory of Open Access Journals (Sweden)

    Małgorzata Łukawska

    2016-12-01

    Full Text Available The habit of the Carmelite Nuns of the Ancient Observance, formed on the basis of their constitutions of 1482, combined forms borrowed from the habit of the Carmelite Monks (tunics with the models that came from Polish women’s fashion (headwear used by married women and widows – mob cap, wimple. The analysis of the habit of the Discalced Carmelite Nuns is based on extensive written sources as well as iconography. Their habit demonstrated the reception of forms of women’s clothing of Spanish provenance (a dress called saya and toca – a headdress, modified in accordance with the spirit of poverty and austerity. In the dress of candidates and in the symbols introduced to the vestition ceremony, native elements are visible. The symbolism of the habit is connected with Carmelite spirituality, whose main features are the cult of the Virgin Mary, that of the Passion, and the spirit of expiation. It also contains some meanings that come from the monastic tradition: the nuptial and baptismal significance being the symbol of new life. The habit is also the tunica sacra and the armour of the Miles Christianus.

  14. [Morphological characterization of experimental parodontitis during its treatment with a phyto-preparation uno de gato].

    Science.gov (United States)

    Miminoshvili, Sh M; Gvamichava, T A; Mdinaradze, N L

    2007-06-01

    Examination of new methods of treatment of parodontitis is stipulated by the significant increase in the number of patients with parodontitis. Experiments were conducted on white outbred male rats weighing 150-200 gr, which were divided into three groups. The first group was a reference one (n=20). The second group includes induced parodontitis (n=15) and the third group includes induced parodontitis with the treatment of uno de gato (n=19). We simulated parodontitis in the following way: on the lower nippers in the field of a neck we attached a ligature causing mechanical damage. We used a intramuscular injection of Nembutal as a means of narcotization (0.1 ml-10 g per mass). The present work is dedicated to morphological studies of the structures of damaged parodontium during its treatment with a phyto-preparation uno de gato. The undertaken treatment has demonstrated partial restoration of the mucous tunic of the gum. Newly formed capillaries were found in the connective tissue. The fibroblasts are mostly mature and collagen-producing. Thus, the study has demonstrated that there is a certain tendency of the tissue restoration and the treatment has produced the best therapeutic results.

  15. Long-term storage effect on chemical composition, nutritional value and quality of Greek onion landrace "Vatikiotiko".

    Science.gov (United States)

    Petropoulos, S A; Ntatsi, G; Fernandes, Â; Barros, L; Barreira, J C M; Ferreira, I C F R; Antoniadis, V

    2016-06-15

    The effect of storage at two temperatures (5±1 and 25±1 °C and 60-70±5% RH for both temperatures) on marketability and quality features of dry bulbs of local landrace "Vatikiotiko", "Sivan F1", "Red Cross F1" and "Creamgold" was examined. During storage measurements for fresh and dry weight of bulbs, tunic and flesh color, bulb firmness, nutritional value and mineral composition were taken at regular intervals. Storage concluded when either bulbs lost marketable quality or sprouting occurred. "Vatikiotiko" onion can be stored for at least 7months at 25±1 °C, whereas at 5±1 °C storage could be prolonged without significant marketability and quality loss. The fact that "Vatikiotiko" landrace can be considered a "storage" onion has to be capitalized in order to increase total production and yield, since storage could cover the market needs that arise throughout the year. Copyright © 2016 Elsevier Ltd. All rights reserved.

  16. Advances in understanding of mammalian penile evolution, human penile anatomy and human erection physiology: clinical implications for physicians and surgeons.

    Science.gov (United States)

    Hsieh, Cheng-Hsing; Liu, Shih-Ping; Hsu, Geng-Long; Chen, Heng-Shuen; Molodysky, Eugen; Chen, Ying-Hui; Yu, Hong-Jeng

    2012-07-01

    Recent studies substantiate a model of the tunica albuginea of the corpora cavernosa as a bi-layered structure with a 360° complete inner circular layer and a 300° incomplete outer longitudinal coat spanning from the bulbospongiosus and ischiocavernosus proximally and extending continuously into the distal ligament within the glans penis. The anatomical location and histology of the distal ligament invites convincing parallels with the quadrupedal os penis and therefore constitutes potential evidence of the evolutionary process. In the corpora cavernosa, a chamber design is responsible for facilitating rigid erections. For investigating its venous factors exclusively, hemodynamic studies have been performed on both fresh and defrosted human male cadavers. In each case, a rigid erection was unequivocally attainable following venous removal. This clearly has significant ramifications in relation to penile venous surgery and its role in treating impotent patients. One deep dorsal vein, 2 cavernosal veins and 2 pairs of para-arterial veins (as opposed to 1 single vein) are situated between Buck's fascia and the tunica albuginea. These newfound insights into penile tunical, venous anatomy and erection physiology were inspired by and, in turn, enhance clinical applications routinely encountered by physicians and surgeons, such as penile morphological reconstruction, penile implantation and penile venous surgery.

  17. Effective depth of spermatogonia in man

    International Nuclear Information System (INIS)

    Casey, R.; Jewett, M.A.S.; Facey, R.A.

    1982-01-01

    Dosimetry for sperm cells irradiated by high-energy betas requires precise knowledge of the effective depth of the spermatogonia, and hence the thickness of overlying tissues (scrotum plus tunics)), because beta dose rate changes very rapidly with depth. Measurements were made on 25 volunteers and surgical patients by mechanical caliper during surgery (2), by ultrasound (14), or by both (9), all at 20 deg C air temperature. The tunica albuginea (TA) measured 0.1 mm. The surgical results (TA excluded) were 2.0 mm, σ = 0.3 mm (n = 11). The ultrasound results (TA included) were 2.2 mm,σ = 0.6 mm (n = 23). There was no correlation of scrotal thickness with age (24-83 years) and only a very weak correlation (r = 0.3) with body mass. There was no decrease in scrotal thickness (at 20 deg C) with further warming but there was an increase (to 3.3 mm from 2.3 mm) with chilling before measurement. Ultrasound is shown to be valid for such measurements. (author)

  18. Abbreviated larval development of Tunicotheres moseri (Rathbun, 1918 (Decapoda, Pinnotheridae, a rare case of parental care in brachyuran crabs

    Directory of Open Access Journals (Sweden)

    Juan Bolaños

    2004-09-01

    Full Text Available Tunicotheres moseri (Rathbun, 1918 presents a rare case of post-hatching parental care not recorded previously among brachyuran decapods. The complete larval development takes place within a brooding enclosure of the parental female, formed by flexure of the broad abdomen against the sternum. The first crab instar is the earliest stage observed to leave this enclosure, doing so without active help from the parental female. The development of stages preceding the first crab was investigated by in vitro culture of eggs obtained from ovigerous crabs inhabiting the atrial cavity of the tunicate Phallusianigra Savigny, 1816, in Venezuela. Eggs were hatched in the laboratory and reared through two zoeal stages and the megalopa. Additional samples of the larval stages were obtained directly from abdominal enclosures of aquarium-held females. All larval stages were described and illustrated in detail. Morphological comparisons were made between larvae from two different populations. Comparisons were also made with other previously described larvae of Pinnotherinae, which led us to conclude that Tunicotheres should not be assigned to the Pinnotherinae sensu stricto. Relationships between the three known disjunct populations assigned to T.moseri remain questionable, especially since the potential for larval dispersal appears to be very limited.

  19. Surface properties of SAR11 bacteria facilitate grazing avoidance.

    Science.gov (United States)

    Dadon-Pilosof, Ayelet; Conley, Keats R; Jacobi, Yuval; Haber, Markus; Lombard, Fabien; Sutherland, Kelly R; Steindler, Laura; Tikochinski, Yaron; Richter, Michael; Glöckner, Frank Oliver; Suzuki, Marcelino T; West, Nyree J; Genin, Amatzia; Yahel, Gitai

    2017-12-01

    Oceanic ecosystems are dominated by minute microorganisms that play a major role in food webs and biogeochemical cycles 1 . Many microorganisms thrive in the dilute environment due to their capacity to locate, attach to, and use patches of nutrients and organic matter 2,3 . We propose that some free-living planktonic bacteria have traded their ability to stick to nutrient-rich organic particles for a non-stick cell surface that helps them evade predation by mucous filter feeders. We used a combination of in situ sampling techniques and next-generation sequencing to study the biological filtration of microorganisms at the phylotype level. Our data indicate that some marine bacteria, most notably the highly abundant Pelagibacter ubique and most other members of the SAR 11 clade of the Alphaproteobacteria, can evade filtration by slipping through the mucous nets of both pelagic and benthic tunicates. While 0.3 µm polystyrene beads and other similarly-sized bacteria were efficiently filtered, SAR11 members were not captured. Reversed-phase chromatography revealed that most SAR11 bacteria have a much less hydrophobic cell surface than that of other planktonic bacteria. Our data call for a reconsideration of the role of surface properties in biological filtration and predator-prey interactions in aquatic systems.

  20. Crystallite Size Effect on Thermal Conductive Properties of Nonwoven Nanocellulose Sheets.

    Science.gov (United States)

    Uetani, Kojiro; Okada, Takumi; Oyama, Hideko T

    2015-07-13

    The thermal conductive properties, including the thermal diffusivity and resultant thermal conductivity, of nonwoven nanocellulose sheets were investigated by separately measuring the thermal diffusivity of the sheets in the in-plane and thickness directions with a periodic heating method. The cross-sectional area (or width) of the cellulose crystallites was the main determinant of the thermal conductive properties. Thus, the results strongly indicate that there is a crystallite size effect on phonon conduction within the nanocellulose sheets. The results also indicated that there is a large interfacial thermal resistance between the nanocellulose surfaces. The phonon propagation velocity (i.e., the sound velocity) within the nanocellulose sheets was estimated to be ∼800 m/s based on the relationship between the thermal diffusivities and crystallite widths. The resulting in-plane thermal conductivity of the tunicate nanocellulose sheet was calculated to be ∼2.5 W/mK, markedly higher than other plastic films available for flexible electronic devices.

  1. Nanocellulose size regulates microalgal flocculation and lipid metabolism

    Science.gov (United States)

    Yu, Sun Il; Min, Seul Ki; Shin, Hwa Sung

    2016-01-01

    Harvesting of microalgae is a cost-consuming step for biodiesel production. Cellulose has recently been studied as a biocompatible and inexpensive flocculant for harvesting microalgae via surface modifications such as cation-modifications. In this study, we demonstrated that cellulose nanofibrils (CNF) played a role as a microalgal flocculant via its network geometry without cation modification. Sulfur acid-treated tunicate CNF flocculated microalgae, but cellulose nanocrystals (CNC) did not. In addition, desulfurization did not significantly influence the flocculation efficiency of CNF. This mechanism is likely related to encapsulation of microalgae by nanofibrous structure formation, which is derived from nanofibrils entanglement and intra-hydrogen bonding. Moreover, flocculated microalgae were subject to mechanical stress resulting in changes in metabolism induced by calcium ion influx, leading to upregulated lipid synthesis. CNF do not require surface modifications such as cation modified CNC and flocculation is derived from network geometry related to nanocellulose size; accordingly, CNF is one of the least expensive cellulose-based flocculants ever identified. If this flocculant is applied to the biodiesel process, it could decrease the cost of harvest, which is one of the most expensive steps, while increasing lipid production. PMID:27796311

  2. Livebearing or egg-laying mammals: 27 decisive nucleotides of FAM168.

    Science.gov (United States)

    Pramanik, Subrata; Kutzner, Arne; Heese, Klaus

    2017-05-23

    In the present study, we determine comprehensive molecular phylogenetic relationships of the novel myelin-associated neurite-outgrowth inhibitor (MANI) gene across the entire eukaryotic lineage. Combined computational genomic and proteomic sequence analyses revealed MANI as one of the two members of the novel family with sequence similarity 168 member (FAM168) genes, consisting of FAM168A and FAM168B, having distinct genetic differences that illustrate diversification in its biological function and genetic taxonomy across the phylogenetic tree. Phylogenetic analyses based on coding sequences of these FAM168 genes revealed that they are paralogs and that the earliest emergence of these genes occurred in jawed vertebrates such as Callorhinchus milii. Surprisingly, these two genes are absent in other chordates that have a notochord at some stage in their lives, such as branchiostoma and tunicates. In the context of phylogenetic relationships among eukaryotic species, our results demonstrate the presence of FAM168 orthologs in vertebrates ranging from Callorhinchus milii to Homo sapiens, displaying distinct taxonomic clusters, comprised of fish, amphibians, reptiles, birds, and mammals. Analyses of individual FAM168 exons in our sample provide new insights into the molecular relationships between FAM168A and FAM168B (MANI) on the one hand and livebearing and egg-laying mammals on the other hand, demonstrating that a distinctive intermediate exon 4, comprised of 27 nucleotides, appears suddenly only in FAM168A and there in the livebearing mammals only but is absent from all other species including the egg-laying mammals.

  3. Winter diets of immature green turtles (Chelonia mydas) on a northern feeding ground: integrating stomach contents and stable isotope analyses

    Science.gov (United States)

    Williams, Natalie C.; Bjorndal, Karen A.; Lamont, Margaret M.; Carthy, Raymond R.

    2015-01-01

    The foraging ecology and diet of the green turtle, Chelonia mydas, remain understudied, particularly in peripheral areas of its distribution. We assessed the diet of an aggregation of juvenile green turtles at the northern edge of its range during winter months using two approaches. Stomach content analyses provide a single time sample, and stable isotope analyses integrate diet over a several-month period. We evaluated diet consistency in prey choice over time by comparing the results of these two approaches. We examined stomach contents from 43 juvenile green turtles that died during cold stunning events in St. Joseph Bay, Florida, in 2008 and 2011. Stomach contents were evaluated for volume, dry mass, percent frequency of occurrence, and index of relative importance of individual diet items. Juvenile green turtles were omnivorous, feeding primarily on seagrasses and tunicates. Diet characterizations from stomach contents differed from those based on stable isotope analyses, indicating the turtles are not feeding consistently during winter months. Evaluation of diets during warm months is needed.

  4. Natural Proline-Rich Cyclopolypeptides from Marine Organisms: Chemistry, Synthetic Methodologies and Biological Status.

    Science.gov (United States)

    Fang, Wan-Yin; Dahiya, Rajiv; Qin, Hua-Li; Mourya, Rita; Maharaj, Sandeep

    2016-10-26

    Peptides have gained increased interest as therapeutics during recent years. More than 60 peptide drugs have reached the market for the benefit of patients and several hundreds of novel therapeutic peptides are in preclinical and clinical development. The key contributor to this success is the potent and specific, yet safe, mode of action of peptides. Among the wide range of biologically-active peptides, naturally-occurring marine-derived cyclopolypeptides exhibit a broad range of unusual and potent pharmacological activities. Because of their size and complexity, proline-rich cyclic peptides (PRCPs) occupy a crucial chemical space in drug discovery that may provide useful scaffolds for modulating more challenging biological targets, such as protein-protein interactions and allosteric binding sites. Diverse pharmacological activities of natural cyclic peptides from marine sponges, tunicates and cyanobacteria have encouraged efforts to develop cyclic peptides with well-known synthetic methods, including solid-phase and solution-phase techniques of peptide synthesis. The present review highlights the natural resources, unique structural features and the most relevant biological properties of proline-rich peptides of marine-origin, focusing on the potential therapeutic role that the PRCPs may play as a promising source of new peptide-based novel drugs.

  5. Phylogenetic reappraisal of Allium subgenus Cyathophora (Amaryllidaceae) and related taxa, with a proposal of two new sections.

    Science.gov (United States)

    Huang, De-Qing; Yang, Jing-Tian; Zhou, Chun-Jing; Zhou, Song-Dong; He, Xing-Jin

    2014-03-01

    The phylogeny of subgenus Cyathophora and representatives of its closely related taxa within Allium were reconstructed based on nrDNA ITS and two plastid fragments (trnL-F and rpl32-trnL). The constructed phylogenies indicated that subgenus Cyathophora was not monophyletic and to be split in three parts positioned in different clusters. Allium kingdonii was unequivocally placed within subgenus Amerallium and formed an immediate sister relationship with New World Amerallium clade, suggesting an unexpected intercontinental disjunct distribution. For another, Allium trifurcatum was firmly nested within subgenus Butomissa next to A. tuberosum and A. ramosum, but it is distinctly different morphologically from the latter by thinly leathery bulb tunics, uniovulate locule and obviously 3-cleft stigma. Based on the geographic features, morphological and molecular evidences, two new sections, Kingdonia X.J.He et D.Q.Huang for A. kingdonii and Trifurcatum X.J.He et D.Q.Huang for A. trifurcatum, were proposed. The remaining three species of subgenus Cyathophora formed a well-defined clade, and the phylogenetic relationships among them recovered were consistent with previous findings. In addition, A. weschniakowii and A. subtilissimum were proven to be a member of subgenera Rhizirideum sensu stricto (s. str.) and Cepa, respectively, rather than subgenera Cepa and Polyprason previously proposed. Section Rhizomatosa represented by A. caespitosum should be subsumed within section Caespitosoprason of subgenus Rhizirideum s. str.

  6. Efeitos da infecção crônica por Toxoplasma gondii sobre a parede intestinal de gatos domésticos The effects of the infection caused by Toxoplasma gondii on the cat duodenal wall

    Directory of Open Access Journals (Sweden)

    Juliana Maria da Silva

    2010-03-01

    to the thickness of mucosa, muscle tunic, total wall, the height of the villous, the depth of the crypts, and the height of the enterocytes and their nuclei were carried out. Calciform cells, the intraepithelial lymphocytes, and the Paneth cells were quantified. The results showed that the infection led to the atrophy of the mucosa, muscle tunic, and the intestinal wall of the duodenum of G2 cats (p < 0.05. The enterocytes height presented significant (p < 0.05 increase for G2 animals. According to the qualitative analysis, the collagen fibers were visibly taken a broader area on the intestinal wall layers, what suggests they have increased in size. Decrease in the sulphomucins secretion and the increase of Paneth cells were observed for these animals (p < 0.05.

  7. Early stages of test formation in larva of Ascidia malaca (Tunicata, Ascidiacea): ultrastructural and cytochemical investigations.

    Science.gov (United States)

    Dolcemascolo, Giuseppe; Gianguzza, Mario

    2004-01-01

    The swimming larvae of ascidians are entirely covered by a hyalin coat called tunic, or test. This covering consists of two cuticular layers, C1 and C2, which surround an inner compartment composed of an amorphous hyalin matrix with numerous fibrils dispersed inside. Data from the literature agree on the key role played by the cells of the larval ectodermic layer in the synthesis and secretion of larval test components. In the present article are reported ultrastructural and cytochemical investigations made during test formation in the swimming larva of Ascidia malaca. Besides confirming the role played by ectodermic cells during the early stages of test formation, the investigations highlight the way in which the fibrillar component of the test is synthetized and secreted. At the ultrastructural level it has been evidenced that the C1 and C2 cuticular layers originate from the tight packing of fibrils. Based on the data reported in the present study, it is hypothesized that while a relevant part of the fibrils, once secreted, remains dispersed inside the matrix of the inner compartment of the test, quite likely in order to increase its consistency, packing of the remaining fibrils leads to the formation of the C1 and C2 cuticular layers. Packing of the fibrils in C1 and C2 could be favoured by their chemically adhesive nature. This hypothesis is strongly supported by the herewith reported results of the cytochemical investigations carried out on the test of the swimming larva of A. malaca. The cytochemical PA-TCH-SP reaction has in fact evidenced that both fibril types, i.e. those dispersed inside the inner compartment and those packed in the C1 and C2 cuticular layers, are constituted by glycoproteins and/or proteoglycans substances whose adhesive properties are well documented in the literature.

  8. The vanadium environment in blood cells of Ascidia ceratodes is divergent at all organismal levels: an XAS and EPR spectroscopic study.

    Science.gov (United States)

    Frank, Patrick; Carlson, Robert M K; Carlson, Elaine J; Hodgson, Keith O

    2003-02-01

    K-edge X-ray absorption and EPR spectroscopies were used to test the variation in blood cell vanadium between and within specimens of the tunicate Ascidia ceratodes from Bodega Bay, California. Intracellular vanadium was speciated by fitting the XAS spectra of whole blood cells with linear combinations of the XAS spectra of models. Blood cell samples representing one specimen each, respectively, revealed 92.5 and 38.7% of endogenous vanadium as [V(H(2)O)(6)](3+), indicating dissimilar distributions. Conversely, vanadium distributions within blood cell samples respectively representing one and six specimens proved very similar. The derived array of V(III) complexes was consistent with multiple intracellular regions that differ both in pH and c(sulfate), both within and between specimens. No systematic effect on vanadium distribution was apparent on mixing blood cells. EPR and XAS results indicated at least three forms of endogenous vanadyl ion, two of which may be dimeric. An inverse linear correlation was found between soluble and complexed forms of vanadyl ion, implying co-regulation. The EPR A value of endogenous vanadyl ion [A(0)=(1.062+/-0.008)x10(-2) cm(-1)] was marginally different from that representing Monterey Bay A. ceratodes [A(0)=(1.092+/-0.006) x10(-2) cm(-1)]. Comparisons indicate that Bodega Bay A. ceratodes maintain V(III) in a more acidic intracellular environment on average than do those from Monterey Bay, showing variation across populations. Blood cell vanadium thus noticeably diverges at all organismal levels among A. ceratodes.

  9. XAS spectroscopy, sulfur, and the brew within blood cells from Ascidia ceratodes.

    Science.gov (United States)

    Frank, Patrick; Hedman, Britt; Hodgson, Keith O

    2014-02-01

    We report the first use of K-edge X-ray absorption spectroscopy (XAS) as a direct spectroscopic probe of pH and cytosolic emf within living cells. A new accuracy metric of model-based fits to K-edge spectra is further developed. Sulfur functional groups in three collections of living blood cells and one sample of cleared blood plasma from the tunicate Ascidia ceratodes were speciated using K-edge XAS. Cysteine and cystine, the preferred thiol-disulfide model, averaged about 12% of total sulfur. Sulfate monoesters and cyclic diesters unexpectedly constituted 36% of blood cell sulfur. Soluble sulfate averaged about 25% across the three blood cell samples, while the ratio of SO4(2-) to HSO4(-) implied average signet ring vacuolar pH values of 0.85, 1.4, or 3.1. Intracellular (VSO4)(+) was unobserved, while [V(RSO3)n]((3-n)+) was detected in the two lowest pH blood cell samples. About 5% of sulfur was distributed as mono- or dibenzothiophene or ethylene-epi-sulfide, or as a thiadiazole reminiscent of the polycarpathiamines. Blood plasma was dominated by sulfate (83%), but with 15% of an alkylsulfate ester and about 2% of low-valent sulfur. Gravimetric analysis of soluble sulfate yielded average concentrations of blood cell sulfur. Average [cysteine] and [cystine] (ranging ~10-30 mM and ~20-90 mM, respectively) implied blood-cell cytosolic emf values of approximately -0.20 V. High cellular [cysteine] is consistent with the proposed model for enzymatic reduction of vanadate by endogenous thiol, wherein the trajectory of metal site-symmetry is controlled and directed through to a thermodynamically favored 7-coordinate V(III) product. Copyright © 2013. Published by Elsevier Inc.

  10. Molecular cloning of a novel glucuronokinase/putative pyrophosphorylase from zebrafish acting in an UDP-glucuronic acid salvage pathway.

    Directory of Open Access Journals (Sweden)

    Roman Gangl

    Full Text Available In animals, the main precursor for glycosaminoglycan and furthermore proteoglycan biosynthesis, like hyaluronic acid, is UDP-glucuronic acid, which is synthesized via the nucleotide sugar oxidation pathway. Mutations in this pathway cause severe developmental defects (deficiency in the initiation of heart valve formation. In plants, UDP-glucuronic acid is synthesized via two independent pathways. Beside the nucleotide sugar oxidation pathway, a second minor route to UDP-glucuronic acid exist termed the myo-inositol oxygenation pathway. Within this myo-inositol is ring cleaved into glucuronic acid, which is subsequently converted to UDP-glucuronic acid by glucuronokinase and UDP-sugar pyrophosphorylase. Here we report on a similar, but bifunctional enzyme from zebrafish (Danio rerio which has glucuronokinase/putative pyrophosphorylase activity. The enzyme can convert glucuronic acid into UDP-glucuronic acid, required for completion of the alternative pathway to UDP-glucuronic acid via myo-inositol and thus establishes a so far unknown second route to UDP-glucuronic acid in animals. Glucuronokinase from zebrafish is a member of the GHMP-kinase superfamily having unique substrate specificity for glucuronic acid with a Km of 31 ± 8 µM and accepting ATP as the only phosphate donor (Km: 59 ± 9 µM. UDP-glucuronic acid pyrophosphorylase from zebrafish has homology to bacterial nucleotidyltransferases and requires UTP as nucleosid diphosphate donor. Genes for bifunctional glucuronokinase and putative UDP-glucuronic acid pyrophosphorylase are conserved among some groups of lower animals, including fishes, frogs, tunicates, and polychaeta, but are absent from mammals. The existence of a second pathway for UDP-glucuronic acid biosynthesis in zebrafish likely explains some previous contradictory finding in jekyll/ugdh zebrafish developmental mutants, which showed residual glycosaminoglycans and proteoglycans in knockout mutants of UDP

  11. 6-bromohypaphorine from marine nudibranch mollusk Hermissenda crassicornis is an agonist of human α7 nicotinic acetylcholine receptor.

    Science.gov (United States)

    Kasheverov, Igor E; Shelukhina, Irina V; Kudryavtsev, Denis S; Makarieva, Tatyana N; Spirova, Ekaterina N; Guzii, Alla G; Stonik, Valentin A; Tsetlin, Victor I

    2015-03-12

    6-Bromohypaphorine (6-BHP) has been isolated from the marine sponges Pachymatisma johnstoni, Aplysina sp., and the tunicate Aplidium conicum, but data on its biological activity were not available. For the nudibranch mollusk Hermissenda crassicornis no endogenous compounds were known, and here we describe the isolation of 6-BHP from this mollusk and its effects on different nicotinic acetylcholine receptors (nAChR). Two-electrode voltage-clamp experiments on the chimeric α7 nAChR (built of chicken α7 ligand-binding and glycine receptor transmembrane domains) or on rat α4β2 nAChR expressed in Xenopus oocytes revealed no action of 6-BHP. However, in radioligand analysis, 6-BHP competed with radioiodinated α-bungarotoxin for binding to human α7 nAChR expressed in GH4C1 cells (IC50 23 ± 1 μM), but showed no competition on muscle-type nAChR from Torpedo californica. In Ca2+-imaging experiments on the human α7 nAChR expressed in the Neuro2a cells, 6-BHP in the presence of PNU120596 behaved as an agonist (EC50 ~80 μM). To the best of our knowledge, 6-BHP is the first low-molecular weight compound from marine source which is an agonist of the nAChR subtype. This may have physiological importance because H. crassicornis, with its simple and tractable nervous system, is a convenient model system for studying the learning and memory processes.

  12. 6-Bromohypaphorine from Marine Nudibranch Mollusk Hermissenda crassicornis is an Agonist of Human α7 Nicotinic Acetylcholine Receptor

    Directory of Open Access Journals (Sweden)

    Igor E. Kasheverov

    2015-03-01

    Full Text Available 6-Bromohypaphorine (6-BHP has been isolated from the marine sponges Pachymatisma johnstoni, Aplysina sp., and the tunicate Aplidium conicum, but data on its biological activity were not available. For the nudibranch mollusk Hermissenda crassicornis no endogenous compounds were known, and here we describe the isolation of 6-BHP from this mollusk and its effects on different nicotinic acetylcholine receptors (nAChR. Two-electrode voltage-clamp experiments on the chimeric α7 nAChR (built of chicken α7 ligand-binding and glycine receptor transmembrane domains or on rat α4β2 nAChR expressed in Xenopus oocytes revealed no action of 6-BHP. However, in radioligand analysis, 6-BHP competed with radioiodinated α-bungarotoxin for binding to human α7 nAChR expressed in GH4C1 cells (IC50 23 ± 1 μM, but showed no competition on muscle-type nAChR from Torpedo californica. In Ca2+-imaging experiments on the human α7 nAChR expressed in the Neuro2a cells, 6-BHP in the presence of PNU120596 behaved as an agonist (EC50 ~80 μM. To the best of our knowledge, 6-BHP is the first low-molecular weight compound from marine source which is an agonist of the nAChR subtype. This may have physiological importance because H. crassicornis, with its simple and tractable nervous system, is a convenient model system for studying the learning and memory processes.

  13. 6-Bromohypaphorine from Marine Nudibranch Mollusk Hermissenda crassicornis is an Agonist of Human α7 Nicotinic Acetylcholine Receptor

    Science.gov (United States)

    Kasheverov, Igor E.; Shelukhina, Irina V.; Kudryavtsev, Denis S.; Makarieva, Tatyana N.; Spirova, Ekaterina N.; Guzii, Alla G.; Stonik, Valentin A.; Tsetlin, Victor I.

    2015-01-01

    6-Bromohypaphorine (6-BHP) has been isolated from the marine sponges Pachymatisma johnstoni, Aplysina sp., and the tunicate Aplidium conicum, but data on its biological activity were not available. For the nudibranch mollusk Hermissenda crassicornis no endogenous compounds were known, and here we describe the isolation of 6-BHP from this mollusk and its effects on different nicotinic acetylcholine receptors (nAChR). Two-electrode voltage-clamp experiments on the chimeric α7 nAChR (built of chicken α7 ligand-binding and glycine receptor transmembrane domains) or on rat α4β2 nAChR expressed in Xenopus oocytes revealed no action of 6-BHP. However, in radioligand analysis, 6-BHP competed with radioiodinated α-bungarotoxin for binding to human α7 nAChR expressed in GH4C1 cells (IC50 23 ± 1 μM), but showed no competition on muscle-type nAChR from Torpedo californica. In Ca2+-imaging experiments on the human α7 nAChR expressed in the Neuro2a cells, 6-BHP in the presence of PNU120596 behaved as an agonist (EC50 ~80 μM). To the best of our knowledge, 6-BHP is the first low-molecular weight compound from marine source which is an agonist of the nAChR subtype. This may have physiological importance because H. crassicornis, with its simple and tractable nervous system, is a convenient model system for studying the learning and memory processes. PMID:25775422

  14. Botryllus schlosseri (Tunicata) whole colony irradiation: Do senescent zooid resorption and immunological resorption involve similar recognition events

    Energy Technology Data Exchange (ETDEWEB)

    Rinkevich, B.; Weissman, I.L. (Israel Oceanographic and Limnological Research, Haifa (Israel))

    1990-02-01

    The colonial tunicate Botryllus schlosseri undergoes cyclic blastogenesis where feeding zooids are senescened and resorbed and a new generation of zooids takes over the colony. When non-identical colonies come into direct contact, they either reject each other or fuse. Fusion is usually followed by the resorption of one of the partners in the chimera (immunological resorption). The striking morphological similarities between the two resorption phenomena suggest that both may involve tissue destruction following self-nonself recognition events. Here we attempt to modify these two events by whole colony gamma irradiation assays. Three sets of experiments were performed: (1) different doses of whole colony irradiation for determination of irradiation effects (110 colonies); (2) pairs of irradiated-nonirradiated isografts of clonal replicates for the potential of reconstruction of the irradiated partners (23 pairs); (3) chimeras of irradiated-nonirradiated partners for analysis of resorption hierarchy. Mortality increased with the irradiation dose. All colonies exposed to more than 5,000 rads died within 19 days, while no colony died below 2,000 rads. The average mortality periods, in days, for doses of 6,000-8,000, 5,000, and 2,500-4,000 rads were 14.4 +/- 3.1 (n = 24), 19.8 +/- 6.0 (n = 15), and 19.6 + 5.1 (n = 22), respectively. Younger colonies (3-6 months old) may survive radiation better than older ones (more than 13 months). Many morphological alterations were recorded in irradiated colonies: ampullar contraction and/or dilation, accumulation of pigment cells within ampullae, abnormal bleeding from blood vessels, sluggish blood circulation, necrotic zones, reduction in bud number, and irregularities in zooid and system structures. With doses of 3,000-4,000 rads and above, irradiation arrested the formation of new buds and interrupted normal takeover.

  15. Origin and loss of nested LRRTM/α-catenin genes during vertebrate evolution.

    Directory of Open Access Journals (Sweden)

    Pavel Uvarov

    Full Text Available Leucine-rich repeat transmembrane neuronal proteins (LRRTMs form in mammals a family of four postsynaptic adhesion proteins, which have been shown to bind neurexins and heparan sulphate proteoglycan (HSPG glypican on the presynaptic side. Mutations in the genes encoding LRRTMs and neurexins are implicated in human cognitive disorders such as schizophrenia and autism. Our analysis shows that in most jawed vertebrates, lrrtm1, lrrtm2, and lrrtm3 genes are nested on opposite strands of large conserved intron of α-catenin genes ctnna2, ctnna1, and ctnna3, respectively. No lrrtm genes could be found in tunicates or lancelets, while two lrrtm genes are found in the lamprey genome, one of which is adjacent to a single ctnna homolog. Based on similar highly positive net charge of lamprey LRRTMs and the HSPG-binding LRRTM3 and LRRTM4 proteins, we speculate that the ancestral LRRTM might have bound HSPG before acquiring neurexins as binding partners. Our model suggests that lrrtm gene translocated into the large ctnna intron in early vertebrates, and that subsequent duplications resulted in three lrrtm/ctnna gene pairs present in most jawed vertebrates. However, we detected three prominent exceptions: (1 the lrrtm3/ctnna3 gene structure is absent in the ray-finned fish genomes, (2 the genomes of clawed frogs contain ctnna1 but lack the corresponding nested (lrrtm2 gene, and (3 contain lrrtm3 gene in the syntenic position but lack the corresponding host (ctnna3 gene. We identified several other protein-coding nested gene structures of which either the host or the nested gene has presumably been lost in the frog or chicken lineages. Interestingly, majority of these nested genes comprise LRR domains.

  16. Plitidepsin: design, development, and potential place in therapy

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    Alonso-Álvarez S

    2017-01-01

    Full Text Available Sara Alonso-Álvarez,1 Emilia Pardal,2 Diego Sánchez-Nieto,3 Miguel Navarro,4 Maria Dolores Caballero,1 Maria Victoria Mateos,1 Alejandro Martín1 1Hematology Department, IBSAL-CIC-USAL, Hospital Universitario de Salamanca, Salamanca, Spain; 2Hematology Department, Hospital Virgen del Puerto, Plasencia, Spain; 3Pharmacy Department, Hospital Universitario de Salamanca, Salamanca, Spain; 4Oncology Department, Hospital Universitario de Salamanca, IBSAL, Salamanca, Spain Abstract: Plitidepsin is a cyclic depsipeptide that was first isolated from a Mediterranean marine tunicate (Aplidium albicans and, at present, is manufactured by total synthesis and commercialized as Aplidin®. Its antitumor activity, observed in preclinical in vitro and in vivo studies has prompted numerous clinical trials to be conducted over the last 17 years, alone or in combination with other anticancer agents. Single-agent plitidepsin has shown limited antitumor activity and a tolerable safety profile in several malignancies, such as noncutaneous peripheral T-cell lymphoma, melanoma, and multiple myeloma. In patients with relapsed or refractory multiple myeloma, plitidepsin activity seems to be enhanced after addition of dexamethasone while remaining well tolerated, and a Phase III trial comparing plitidepsin plus dexamethasone vs dexamethasone alone is underway. Additional studies are required to better define the role of plitidepsin in combination with other active agents in these indications. Results of plitidepsin activity in other hematological malignancies or solid tumors have been disappointing so far. Further studies analyzing its mechanisms of action and potential biomarkers will help select patients who may benefit most from this drug. In this review, we critically analyze the published studies on plitidepsin in hematological malignancies and solid tumors and discuss its current role and future perspectives in treating these malignancies. We also review its design

  17. Mechanical grading in PGI Tropea red onion post harvest operations

    Directory of Open Access Journals (Sweden)

    Bruno Bernardi

    2013-09-01

    Full Text Available The growing interest expressed by consumers toward food products quality as well as toward their linkage to the territory, has led producers to fit to the continuous rising demand for “typical products”, and to look for new and more efficient production and marketing strategies. An emblematic case is represented by Tropea red onion that, as a typical product, plays an important role in economical and rural development of the territory to which it is linked. The organoleptic features offered by “Tropea Red Onion”, PGI certified (Calabria, have to be associated as well to the quality of services that accompanies its processing. Technology application in post-harvest operations, has certainly contributed to make faster and less tiring all processing tasks. The main problem related to the mechanization of Tropea red onion post-harvest operations lies in the removal of the various layers of the external tunic, making it impossible for optical or electronic grader to achieve this task in a satisfactory way since the sensors are not able yet to separate the “bulb” from its involucre. In this context, the current study aims to assess the productivity of three different machines used for round Tropea red onion grading, and determine their work efficiency. The carried out analysis highlighted the ability of the studied machines to ensure a high work capacity, while maintaining a high level of precision during calibration process. Such precision allows to decrease laborer employment and increase processing chain speed, rising as well the annual use of the machines, allowing consequently processing cost savings. For a more profitable employment of such graders, it is, however, necessary from one hand, to properly form the technicians responsible of processing plants management, and from the other hand, to be able to take advantage of a technical assistance network, able to serve users in a short time.

  18. Systematics of the hypervariable Moraea tripetala complex (Iridaceae: Iridoideae of the southern African winter rainfall zone

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    P. Goldblatt

    2012-12-01

    Full Text Available Field and laboratory research has shown that the Moraea tripetala complex of western South Africa, traditionally treated as a single species, sometimes with two additional varieties, has a pattern of morphological and cytological variation too complex to be accommodated in a single species. Variation in floral structure, especially the shape of the inner tepals, degree of union of the filaments, anther length and pollen colour form coherent patterns closely correlated with morphology of the corm tunics, mode of vegetative reproduction, and in some instances capsule and seed shape and size. The morphological patterns also correlate with geography, flowering time and sometimes habitat. It is especially significant that different variants of the complex may co-occur, each with overlapping or separate flowering times, a situation that conflicts with a single species taxonomy. We propose recognizing nine species and three additional subspecies for plants currently assigned to M. tripetala. M. grandis, from the western Karoo, has virtually free filaments and leaves often ± plane distally; closely allied M. amabilis, also with ± free filaments and often hairy leaves, is centred in the western Karoo and Olifants River Valley. Its range overlaps that of M. cuspidata, which has narrowly channelled, smooth leaves, linear inner tepals spreading distally and filaments united for up to 1.5 mm. M. decipiens from the Piketberg, M. hainebachiana, a local endemic of coastal limestone fynbos in the Saldanha District, M. ogamana from seasonally wet lowlands, and early flowering M. mutila constitute the remaining species of the complex in the southwestern Western Cape. M. helmei, a local endemic of middle elevations in the Kamiesberg, Namaqualand, has small flowers with short, tricuspidate inner tepals. All but M. amabilis and M. mutila are new species. We divide M. tripetala sensu stricto into three subspecies: widespread subsp. tripetala, subsp. violacea from

  19. Peculiarities of toxic effects exerted by hexyl ether of 5-aminolevulinic acid and grounds for working our regulations of its safe production and application

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    Е.К. Vlasenko

    2017-09-01

    Full Text Available Our research object was hexyl ether of 5-aminolevulinic acid applied as plants growth regulator which was synthe-sized with an original technology by Bioorganic Chemistry Institute of Belarus National Academy of science. Our research goal was to determine peculiarities of toxic effects exerted by this new plants protector on experimental models in vivo/in vitro and to give grounds for hygienic standards of its contents in various media which were to provide its safe production and application. We conducted our research with the use of toxicological, physiological, hematological, biochemical, immu-nologic, cytogenetic, cytological, and statistical methods. We were the first to perform toxicological assessment of this new plants growth regulator under different regimes, doses and ways of introduction into laboratory animals' bodies and it helped us to detect its toxicometric parameters and peculiarities of its biological effects which became apparent through skin-resorptive and cumulative properties, irritating impacts on mucous tunics, moderate reproductive toxicity without sub-stantial signs of gonadotropic, mutagenic, and allergenic impacts on a body. We detected that toxic impacts exerted by the examined substance on a body was combined with membrane-tropic and cytotoxic effects. We determined criteria and limit-ing parameters of hazardous effects exerted by hexyl ether of 5-aminolevulinic acid in the course of a chronic experiment, and it gave us grounds for fixing allowable daily dose for a man and for working out a number of regulations on the sub-stance contents in environmental objects (working area air, water, and soil, in food raw materials, and in food products (grain, rape, rape and linen oil. The obtained results were used as a basis for fixing 9 hygienic standards and were used for the state registration of this plant growth regulator; it will provide its safe production and application in agriculture.

  20. Screening for Anti-Cancer Compounds in Marine Organisms in Oman.

    Science.gov (United States)

    Dobretsov, Sergey; Tamimi, Yahya; Al-Kindi, Mohamed A; Burney, Ikram

    2016-05-01

    Marine organisms are a rich source of bioactive molecules with potential applications in medicine, biotechnology and industry; however, few bioactive compounds have been isolated from organisms inhabiting the Arabian Gulf and the Gulf of Oman. This study aimed to isolate and screen the anti-cancer activity of compounds and extracts from 40 natural products of marine organisms collected from the Gulf of Oman. This study was carried out between January 2012 and December 2014 at the Sultan Qaboos University, Muscat, Oman. Fungi, bacteria, sponges, algae, soft corals, tunicates, bryozoans, mangrove tree samples and sea cucumbers were collected from seawater at Marina Bandar Al-Rowdha and Bandar Al-Khayran in Oman. Bacteria and fungi were isolated using a marine broth and organisms were extracted with methanol and ethyl acetate. Compounds were identified from spectroscopic data. The anti-cancer activity of the compounds and extracts was tested in a Michigan Cancer Foundation (MCF)-7 cell line breast adenocarcinoma model. Eight pure compounds and 32 extracts were investigated. Of these, 22.5% showed strong or medium anti-cancer activity, with malformin A, kuanoniamine D, hymenialdisine and gallic acid showing the greatest activity, as well as the soft coral Sarcophyton sp. extract. Treatment of MCF-7 cells at different concentrations of Sarcophyton sp. extracts indicated the induction of concentration-dependent cell death. Ultrastructural analysis highlighted the presence of nuclear fragmentation, membrane protrusion, blebbing and chromatic segregation at the nuclear membrane, which are typical characteristics of cell death by apoptosis induction. Some Omani marine organisms showed high anti-cancer potential. The efficacy, specificity and molecular mechanisms of anti-cancer compounds from Omani marine organisms on various cancer models should be investigated in future in vitro and in vivo studies.

  1. Isolation of biologically functional RNA during programmed death of a colonial ascidian.

    Science.gov (United States)

    Chang, W T; Lauzon, R J

    1995-01-01

    The blastogenic (asexual) cycle of the colonial ascidian Botryllus schlosseri (Tunicata, Ascidiaceae) concludes in a cyclical phase of programmed cell and zooid death called takeover, in which all asexually derived adults die synchronously by apoptosis. The characterization of developmentally regulated genes whose expression patterns are selectively modulated during this process could pave the way to understand how this model organism dies. However, isolation of biologically functional RNA in this and other colonial ascidians with conventional phenol/chloroform-based procedures is hampered by extensive contamination of RNA preparations by pigments. Upon cell lysis, pigments that normally reside within specialized cells in the mantle wall of the adult are released and tightly associate with nucleic acids. Here, we report on the usefulness of a single-step RNA isolation method in which acid guanidinium isothiocyanate is used as an extraction medium, followed by preparative cesium chloride ultracentrifugation. This procedure successfully isolated biologically active, high-purity total RNA (OD260/OD280 = 1.9-2.1) from Botryllus colonies during takeover, as well as other species of colonial ascidians (Diplosoma macdonaldii, Botrylloides diegense) irrespective of pigmentation. Northern blot analysis performed with a 32P-labeled tunicate actin probe detected two polyadenylated transcripts of 1.5 and 1.7 kilobases in length from both growth phase and takeover colonies. Two-dimensional protein gel assays from in vitro translated mRNA preparations further revealed that specific transcripts were up-regulated during takeover, while others were repressed or down-regulated. Growth phase and takeover-specific cDNA libraries were constructed from pooled poly(A)+ RNA with a complexity of 1.0 x 10(7) and 1.2 x 10(7) recombinants respectively per 100 ng of cDNA before amplification.(ABSTRACT TRUNCATED AT 250 WORDS)

  2. Drugs from the Sea - Opportunities and Obstacles

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    Rainer Ebel

    2003-11-01

    Full Text Available Abstract: The supply problem with regard to drug development and sustainable production lies in the limited amounts of biomass of most marine invertebrates available from wild stocks. Thus, most pharmacologically active marine natural products can only be isolated in minute yields. Total synthesis of pharmacologically active natural products has been successfully established but is in many cases economically not feasible due to the complexity of the molecular structures and the low yields. To solve the pressing supply issue in marine drug discovery, other strategies appear to be more promising. One of these is mariculture which has successfully been established with the bryozoan Bugula neritina (the source of the bryostatins and the tunicate Ecteinascidia turbinata (the source of ET-743. Another strategy involves partial synthesis from precursors which are biotechnologically available. An example is ET-743 that can be partially synthesized from safracin B which is a metabolite of Pseudomonas fluorescens. There have been many examples of striking structural similarities between natural products obtained from marine invertebrates and those of microbial origin which suggests that microorganisms living in their invertebrate hosts could be the actual producers of these secondary metabolites. With regard to sustainable biotechnological production of pharmacologically important metabolites from marine invertebrates and their “endosymbionts”, a more advanced strategy is to focus on cloning and expression of the respective key biosynthetic gene clusters. This molecular biological approach will open up new avenues for biotechnological production of drugs or drug candidates from the sea.

  3. Diet composition of the round sardinella Sardinella aurita Valenciennes, 1847 (Osteichthyes: Clupeidae in the Turkish Aegean Sea

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    Bahar Bayhan

    2015-12-01

    Full Text Available Sardinella aurita, a round sardinella from Clupeidae family, is a pelagic fish found in tropical and temperate seas, just like other members of its family. The species has a wide distribution and its contribution to Mediterranean and international fisheries production potential is high. In Turkey, this species has a wide distribution in the Mediterranean Sea and the Aegean Sea, on the other hand, it is rarely seen in the Black Sea and Marmara Sea. Apart from its economic contribution to the world fisheries industry, the species has an important role in the food chain in regions it is found as it takes part in diet composition of its predators such as greater amberjack, and common dolphinfish. Nowadays, trophic levels are used in order to develop ecosystem based fisheries management strategies. For this purpose, diet composition of the round sardinella was investigated. Samples were obtained from commercial fishermen, who generally use purse seine and gill nets in Izmir Bay concerned during October 2010 - September 2011. A total of 434 S. aurita were collected all year round, with total lengths ranging 12.1 to 27.1 cm. Fish were dissected immediately after capture, stomachs removed and stored in formalin (10% until the contents were analysed. Stomach contents examined using a SZX7 Olympus stereo microscope. Prey items were identified to the lowest possible taxon. Forty eight species were identified, belonging to six major groups: Polychaeta, Crustacea, Mollusca, Chaetognatha, Tunicate and Teleostei. Finally crustaceans were the most important food item in terms of index of relative importance. At least 31 copepod species were identified, where Calanoida, Oithona nana, Oncaea media and Oithona plumifera appeared all year round with %IRI ≥ 10. With this study, the feeding regime of round sardinella, was identified in detail for the Aegean Sea of Turkey for the first time.

  4. The echinoderm immune system. Characters shared with vertebrate immune systems and characters arising later in deuterostome phylogeny.

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    Smith, L C; Davidson, E H

    1994-04-15

    In summary, the characters of the echinoderm immune system that we review here can be considered to illuminate the baseline nonadaptive immune systems that were our original deuterostome heritage. We still retain--and greatly rely upon--similarly functioning, nonadaptive cellular defense systems. It is worth stressing that sea urchins are long lived, normally healthy animals that display remarkable abilities to heal wounds and combat major infections. From an external point of view, their immune systems obviously work very well. Thus, their cellular defense systems are extremely sensitive, and they respond rapidly to minor perturbations, all without any specific adaptive capabilities. These systems probably function through the transduction of signals conveying information on injury and infection, just as do the equivalent systems that underlie and back up our own adaptive immune systems, and that provide the initial series of defenses against pathogenic invasions. Many extremely interesting questions remain regarding the evolution of the deuterostome immune response. Are the echinoderm and tunicate systems the same, or have the protochordates augmented the basic phagocyte system with an as yet unidentified chordate-like character? Do the jawless fishes produce Igs that would make them similar to the sharks, or are they vertebrates without an Ig system that essentially rely on an invertebrate-like, nonspecific, activated phagocyte type of immune system? How do sharks regulate their immune system without T cells and MHC class I? How do they avoid producing autoantibodies? Future research will not only answer these questions, but those answers will also be enlightening with regard to the origins of the mammalian immune system in which ancient functions and subsystems remain.

  5. A peculiar lamin in a peculiar mammal: Expression of lamin LIII in platypus (Ornithorhynchus anatinus).

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    Peter, Annette; Khandekar, Shaunak; Deakin, Janine E; Stick, Reimer

    2015-11-01

    Platypus (Ornithorhynchus anatinus) holds a unique phylogenetic position at the base of the mammalian lineage due to an amalgamation of mammalian and sauropsid-like features. Here we describe the set of four lamin genes for platypus. Lamins are major components of the nuclear lamina, which constitutes a main component of the nucleoskeleton and is involved in a wide range of nuclear functions. Vertebrate evolution was accompanied by an increase in the number of lamin genes from a single gene in their closest relatives, the tunicates and cephalochordates, to four genes in the vertebrate lineage. Of the four genes the LIII gene is characterized by the presence of two alternatively spliced CaaX-encoding exons. In amphibians and fish LIII is the major lamin protein in oocytes and early embryos. The LIII gene is conserved throughout the vertebrate lineage, with the notable exception of marsupials and placental mammals, which have lost the LIII gene. Here we show that platypus has retained an LIII gene, albeit with a significantly altered structure and with a radically different expression pattern. The platypus LIII gene contains only a single CaaX-encoding exon and the head domain together with coil 1a and part of coil1b of the platypus LIII protein is replaced by a novel short non-helical N-terminus. It is expressed exclusively in the testis. These features resemble those of male germ cell-specific lamins in placental mammals, in particular those of lamin C2. Our data suggest (i) that the specific functions of LIII, which it fulfills in all other vertebrates, is no longer required in mammals and (ii) once it had been freed from these functions has undergone structural alterations and has adopted a new functionality in monotremes. Copyright © 2015 Elsevier GmbH. All rights reserved.

  6. Effects of Karenia brevis on clearance rates and bioaccumulation of brevetoxins in benthic suspension feeding invertebrates.

    Science.gov (United States)

    Echevarria, Michael; Naar, Jerome P; Tomas, Carmelo; Pawlik, Joseph R

    2012-01-15

    Blooms of the toxic alga Karenia brevis occur along coastlines where sessile suspension feeding invertebrates are common components of benthic communities. We studied the effects of K. brevis on four benthic suspension feeding invertebrates common to the coast of the SE United States: the sponge Haliclona tubifera, the bryozoan Bugula neritina, the bivalve Mercenaria mercenaria, and the tunicate Styela plicata. In controlled laboratory experiments, we determined the rate at which K. brevis was cleared from the seawater by these invertebrates, the effect of K. brevis on clearance rates of a non-toxic phytoplankton species, Rhodomonas sp., and the extent to which brevetoxins bioaccumulated in tissues of invertebrates using an enzyme-linked immunosorbent assay (ELISA). All four invertebrate species cleared significant quantities of K. brevis from seawater, with mean clearance rates ranging from 2.27 to 6.71 L g h⁻¹ for H. tubifera and S. plicata, respectively. In the presence of K. brevis, clearance rates of Rhodomonas sp. by B. neritina and S. plicata were depressed by 75% and 69%, respectively, while clearance rates by H. tubifera and M. mercenaria were unaffected. Negative effects of K. brevis were impermanent; after a recovery period of 13 h, B. neritina and S. plicata regained normal clearance rates. All four invertebrates accumulated high concentrations of brevetoxin after a 4h exposure to K. brevis, but when animals were transferred to filtered seawater for 15 h after exposure, brevetoxin concentrations in the tissues of H. tubifera and B. neritina decreased by ∼80%, while there was no change in toxin concentration in the tissues of S. plicata and M. mercenaria. High cell concentrations of K. brevis may cause a suppression of clearance rates in benthic suspension feeding invertebrates, resulting in a positive feedback for bloom formation. Also, high concentrations of toxin may accumulate in the tissues of benthic suspension feeding invertebrates that may

  7. Prevalence, Variability and Bioconcentration of Saxitoxin-Group in Different Marine Species Present in the Food Chain.

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    Oyaneder Terrazas, Javiera; Contreras, Héctor R; García, Carlos

    2017-06-12

    The saxitoxin-group (STX-group) corresponds to toxic metabolites produced by cyanobacteria and dinoflagellates of the genera Alexandrium, Gymnodinium , and Pyrodinium . Over the last decade, it has been possible to extrapolate the areas contaminated with the STX-group worldwide, including Chile, a phenomenon that has affected ≈35% of the Southern Pacific coast territory, generating a high economic impact. The objective of this research was to study the toxicity of the STX-group in all aquatic organisms (bivalves, algae, echinoderms, crustaceans, tunicates, cephalopods, gastropods, and fish) present in areas with a variable presence of harmful algal blooms (HABs). Then, the toxic profiles of each species and dose of STX equivalents ingested by a 60 kg person from 400 g of shellfish were determined to establish the health risk assessment. The toxins with the highest prevalence detected were gonyautoxin-4/1 (GTX4/GTX1), gonyautoxin-3/2 (GTX3/GTX2), neosaxitoxin (neoSTX), decarbamoylsaxitoxin (dcSTX), and saxitoxin (STX), with average concentrations of 400, 2800, 280, 200, and 2000 µg kg -1 respectively, a species-specific variability, dependent on the evaluated tissue, which demonstrates the biotransformation of the analogues in the trophic transfer with a predominance of α-epimers in all toxic profiles. The identification in multiple vectors, as well as in unregulated species, suggests that a risk assessment and risk management update are required; also, chemical and specific analyses for the detection of all analogues associated with the STX-group need to be established.

  8. Prevalence, Variability and Bioconcentration of Saxitoxin-Group in Different Marine Species Present in the Food Chain

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    Javiera Oyaneder Terrazas

    2017-06-01

    Full Text Available The saxitoxin-group (STX-group corresponds to toxic metabolites produced by cyanobacteria and dinoflagellates of the genera Alexandrium, Gymnodinium, and Pyrodinium. Over the last decade, it has been possible to extrapolate the areas contaminated with the STX-group worldwide, including Chile, a phenomenon that has affected ≈35% of the Southern Pacific coast territory, generating a high economic impact. The objective of this research was to study the toxicity of the STX-group in all aquatic organisms (bivalves, algae, echinoderms, crustaceans, tunicates, cephalopods, gastropods, and fish present in areas with a variable presence of harmful algal blooms (HABs. Then, the toxic profiles of each species and dose of STX equivalents ingested by a 60 kg person from 400 g of shellfish were determined to establish the health risk assessment. The toxins with the highest prevalence detected were gonyautoxin-4/1 (GTX4/GTX1, gonyautoxin-3/2 (GTX3/GTX2, neosaxitoxin (neoSTX, decarbamoylsaxitoxin (dcSTX, and saxitoxin (STX, with average concentrations of 400, 2800, 280, 200, and 2000 µg kg−1 respectively, a species-specific variability, dependent on the evaluated tissue, which demonstrates the biotransformation of the analogues in the trophic transfer with a predominance of α-epimers in all toxic profiles. The identification in multiple vectors, as well as in unregulated species, suggests that a risk assessment and risk management update are required; also, chemical and specific analyses for the detection of all analogues associated with the STX-group need to be established.

  9. Space use of a dominant Arctic vertebrate: Effects of prey, sea ice, and land on Pacific walrus resource selection

    Science.gov (United States)

    Beatty, William; Jay, Chadwick V.; Fischbach, Anthony S.; Grebmeier, Jacqueline M.; Taylor, Rebecca L.; Blanchard, Arny L.; Jewett, Stephen C.

    2016-01-01

    Sea ice dominates marine ecosystems in the Arctic, and recent reductions in sea ice may alter food webs throughout the region. Sea ice loss may also stress Pacific walruses (Odobenus rosmarus divergens), which feed on benthic macroinvertebrates in the Bering and Chukchi seas. However, no studies have examined the effects of sea ice on foraging Pacific walrus space use patterns. We tested a series of hypotheses that examined walrus foraging resource selection as a function of proximity to resting substrates and prey biomass. We quantified walrus prey biomass with 17 benthic invertebrate families, which included bivalves, polychaetes, amphipods, tunicates, and sipunculids. We included covariates for distance to sea ice and distance to land, and systematically developed a series of candidate models to examine interactions among benthic prey biomass and resting substrates. We ranked candidate models with Bayesian Information Criterion and made inferences on walrus resource selection based on the top-ranked model. Based on the top model, biomass of the bivalve family Tellinidae, distance to ice, distance to land, and the interaction of distances to ice and land all positively influenced walrus foraging resource selection. Standardized model coefficients indicated that distance to ice explained the most variation in walrus foraging resource selection followed by Tellinidae biomass. Distance to land and the interaction of distances to ice and land accounted for similar levels of variation. Tellinidae biomass likely represented an index of overall bivalve biomass, indicating walruses focused foraging in areas with elevated levels of bivalve and tellinid biomass. Our results also emphasize the importance of sea ice to walruses. Projected sea ice loss will increase the duration of the open water season in the Chukchi Sea, altering the spatial distribution of resting sites relative to current foraging areas and possibly affecting the spatial structure of benthic communities.

  10. Molecular Quantification of Zooplankton Gut Content: The Case For qPCR

    Science.gov (United States)

    Frischer, M. E.; Walters, T. L.; Gibson, D. M.; Nejstgaard, J. C.; Troedsson, C.

    2016-02-01

    The ability to obtain information about feeding selectivity and rates in situ for zooplankton is vital for understanding the mechanisms structuring marine ecosystems. However, directly estimating feeding selection and rates of zooplankton, without bias, associated with culturing conditions has been notoriously difficult. A potential approach for addressing this problem is to target prey-specific DNA as a marker for prey ingestion and selection. In this study we report the development of a differential length amplification quantitative PCR (dla-qPCR) assay targeting the 18S rRNA gene to validate the use of a DNA-based approach to quantify consumption of specific plankton prey by the pelagic tunicate (doliolid) Dolioletta gegenbauri. Compared to copepods and other marine animals, the digestion of prey genomic DNA inside the gut of doliolids is low. This method minimizes potential underestimations, and therefore allows prey DNA to be used as an effective indicator of prey consumption. We also present an initial application of a qPCR-assay to estimate consumption of specific prey species on the southeastern continental shelf of the U.S., where doliolids stochastically bloom in response to upwelling events. Estimated feeding rates, based on qPCR, were in the same range as those estimated from clearance rates in laboratory feeding studies. In the field, consumption of specific prey, including the centric diatom Thalassiosira spp. was detected in the gut of wild caught D. gegenbauri at the levels consistent with their abundance in the water column at the time of collection. Thus, both experimental and field investigations support the hypothesis that a qPCR approach will be useful for the quantitative investigation of the in situ diet of D. gegenbauri without introduced bias' associated with cultivation.

  11. Production of Dissolved Organic Matter During Doliolid Feeding

    Science.gov (United States)

    Castellane, N. J.; Paffenhofer, G. A.; Stubbins, A.

    2016-02-01

    The biological carbon pump (BCP) draws carbon dioxide out of the atmosphere and buries it at the seafloor. The efficiency of the BCP is determined in part by the sinking rates of particulate organic carbon (POC) from ocean surface waters. Zooplankton can package POC into fecal pellets with higher sinking rates than their food source (e.g. phytoplankton), increasing the efficiency of the BCP. However, dissolved organic carbon (DOC) is also produced as zooplankton ingest and egest food, reducing the efficiency of BCP. The pelagic tunicate Dolioletta gegenbauri (doliolid) is a gelatinous zooplankton found at high concentrations in shelf waters, including our study site: the South Atlantic Bight. Doliolids are efficient grazers capable of stripping large quantities of phytoplankton from the water column. To determine the balance between pellet formation and DOC production during feeding, doliolids (6-7 mm gonozooids) were placed in natural seawater amended with a live phytoplankton food source and incubated on a plankton wheel. Dissolved organic matter (DOM) released directly to the water as well as the water soluble fraction of pellet organic matter were quantified and optically characterized. Colored dissolved organic matter (CDOM) absorbance and fluorescence spectra revealed that doliolid feeding produces DOM with optical properties that are commonly indicative of newly produced, highly biolabile DOM of microbial origin. Based upon these optical characteristics, doliolid-produced DOM is expected to be highly bio-labile in the environment and therefore rapidly degraded by surface ocean microbes shunting phytoplankton-derived organic carbon out of the BCP and back to dissolved inorganic carbon.

  12. Morphological and quantitative analysis of myenteric plexus neurons of intestinal bulb of Cyprinus carpio (Linnaeus, 1758 (Osteichthyes, Cyprinidae Análise morfológica e quantitativa dos neurônios do plexo mientérico do bulbo intestinal de Cyprinus Carpio. (Linnaeus, 1758 (Osteichthyes, Cyprinidae

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    Patrícia Marega

    2000-05-01

    Full Text Available The myenteric plexus shows morphologic and quantitative variability in the alimentary canals of different species of animals. We have quantified and analyzed the morphology of the myenteric plexus of ten adult Cyprinus carpio intestinal bulbs, by means of histological cross sections stained with HE and Van Gieson methods, as well as Giemsa-stained whole mount preparations. The myenteric plexus, located between the longitudinal and circular layers of the muscular tunic, is formed by isolated neurons and ganglia. Percentages of small, medium and large neurons were 21%, 63.4% and 15.6%, respectively, with a prevalence of intermediary cytoplasmic basophily and peripheral nuclei. Neuronal density in 6.92mm2 of intestinal bulb was of 2,040 neuronsO plexo mientérico apresenta variabilidade morfológica e quantitativa ao longo do tubo digestório das diferentes espécies animais. No presente trabalho quantificamos e analisamos a morfologia dos neurônios do plexo mientérico de dez bulbos intestinais de Cyprinus carpio, por meio de cortes histológicos corados com HE e Van Gieson e de preparados de membrana corados pelo método de Giemsa. O plexo mientérico foi localizado entre os estratos longitudinal e circular da túnica muscular, sendo constituído por neurônios isolados e por gânglios. As porcentagens de neurônios pequenos, médios e grandes foram 21%, 63,4% e 15,6%, respectivamente, predominando neurônios com basofilia citoplasmática intermediária e núcleo em posição periférica. A análise quantitativa revelou a presença de 2.040 neurônios/6,92mm2 de bulbo intestinal

  13. Screening for Anti-Cancer Compounds in Marine Organisms in Oman

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    Sergey Dobretsov

    2016-05-01

    Full Text Available Objectives: Marine organisms are a rich source of bioactive molecules with potential applications in medicine, biotechnology and industry; however, few bioactive compounds have been isolated from organisms inhabiting the Arabian Gulf and the Gulf of Oman. This study aimed to isolate and screen the anti-cancer activity of compounds and extracts from 40 natural products of marine organisms collected from the Gulf of Oman. Methods: This study was carried out between January 2012 and December 2014 at the Sultan Qaboos University, Muscat, Oman. Fungi, bacteria, sponges, algae, soft corals, tunicates, bryozoans, mangrove tree samples and sea cucumbers were collected from seawater at Marina Bandar Al-Rowdha and Bandar Al-Khayran in Oman. Bacteria and fungi were isolated using a marine broth and organisms were extracted with methanol and ethyl acetate. Compounds were identified from spectroscopic data. The anti-cancer activity of the compounds and extracts was tested in a Michigan Cancer Foundation (MCF-7 cell line breast adenocarcinoma model. Results: Eight pure compounds and 32 extracts were investigated. Of these, 22.5% showed strong or medium anti-cancer activity, with malformin A, kuanoniamine D, hymenialdisine and gallic acid showing the greatest activity, as well as the soft coral Sarcophyton sp. extract. Treatment of MCF-7 cells at different concentrations of Sarcophyton sp. extracts indicated the induction of concentration-dependent cell death. Ultrastructural analysis highlighted the presence of nuclear fragmentation, membrane protrusion, blebbing and chromatic segregation at the nuclear membrane, which are typical characteristics of cell death by apoptosis induction. Conclusion: Some Omani marine organisms showed high anti-cancer potential. The efficacy, specificity and molecular mechanisms of anti-cancer compounds from Omani marine organisms on various cancer models should be investigated in future in vitro and in vivo studies.

  14. The Evolutionary Landscape of Dbl-Like RhoGEF Families: Adapting Eukaryotic Cells to Environmental Signals.

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    Fort, Philippe; Blangy, Anne

    2017-06-01

    The dynamics of cell morphology in eukaryotes is largely controlled by small GTPases of the Rho family. Rho GTPases are activated by guanine nucleotide exchange factors (RhoGEFs), of which diffuse B-cell lymphoma (Dbl)-like members form the largest family. Here, we surveyed Dbl-like sequences from 175 eukaryotic genomes and illuminate how the Dbl family evolved in all eukaryotic supergroups. By combining probabilistic phylogenetic approaches and functional domain analysis, we show that the human Dbl-like family is made of 71 members, structured into 20 subfamilies. The 71 members were already present in ancestral jawed vertebrates, but several members were subsequently lost in specific clades, up to 12% in birds. The jawed vertebrate repertoire was established from two rounds of duplications that occurred between tunicates, cyclostomes, and jawed vertebrates. Duplicated members showed distinct tissue distributions, conserved at least in Amniotes. All 20 subfamilies have members in Deuterostomes and Protostomes. Nineteen subfamilies are present in Porifera, the first phylum that diverged in Metazoa, 14 in Choanoflagellida and Filasterea, single-celled organisms closely related to Metazoa and three in Fungi, the sister clade to Metazoa. Other eukaryotic supergroups show an extraordinary variability of Dbl-like repertoires as a result of repeated and independent gain and loss events. Last, we observed that in Metazoa, the number of Dbl-like RhoGEFs varies in proportion of cell signaling complexity. Overall, our analysis supports the conclusion that Dbl-like RhoGEFs were present at the origin of eukaryotes and evolved as highly adaptive cell signaling mediators. © The Author 2017. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

  15. A geographical information system for the management of the aquaculture data in the Adriatic Sea – the Strengthening of Centres for Aquaculture Production and Safety surveillance in the Adriatic countries experience: Present capabilities, tools and functions

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    Susanna Tora

    2017-11-01

    Full Text Available The European Commission (EC regulation no. 854/2004 requires a systematic monitoring of chemical and microbiological contaminants in live bivalve molluscs, live echinoderms, live tunicates and live marine gastropods for human consumption through surveillance plans to be implemented in all European Union (EU countries.A consortium of five Adriatic countries was set up in the framework of the Instrument of Pre-accession Assistance Adriatic Cross-border Cooperation Programme (IPA Adriatic CBC 2007- 2013 with the aim of collecting data and distribute information on harvesting and production in mollusc areas. A web-based geographical information system (GIS application was developed to support the partners to manage data and to make these data available to final users, policy makers and to risk assessors. The GIS for the Strengthening of Centres for Aquaculture Production and Safety surveillance in the Adriatic countries (CAPS2 is divided into two levels, the national and the supranational one, and it distributes spatial and epidemiological information coming from various data acquisition and management sites. The great innovation is the possibility for each country to use online drawing, modifying and change of the geographic areas according to national surveillance needs. Currently it hosts data coming from about 230 production and relay areas with more than 29,478 laboratory tests performed on collected samples since August 2014. Data collected are used by each national competent authority to classify production or relay areas according to the EC regulation mentioned and to conduct risk assessment studies to evaluate the level of consumers’ exposure to contaminants in the consumption of bivalve mollusc products.

  16. Evolution of the metazoan mitochondrial replicase.

    Science.gov (United States)

    Oliveira, Marcos T; Haukka, Jani; Kaguni, Laurie S

    2015-03-03

    The large number of complete mitochondrial DNA (mtDNA) sequences available for metazoan species makes it a good system for studying genome diversity, although little is known about the mechanisms that promote and/or are correlated with the evolution of this organellar genome. By investigating the molecular evolutionary history of the catalytic and accessory subunits of the mtDNA polymerase, pol γ, we sought to develop mechanistic insight into its function that might impact genome structure by exploring the relationships between DNA replication and animal mitochondrial genome diversity. We identified three evolutionary patterns among metazoan pol γs. First, a trend toward stabilization of both sequence and structure occurred in vertebrates, with both subunits evolving distinctly from those of other animal groups, and acquiring at least four novel structural elements, the most important of which is the HLH-3β (helix-loop-helix, 3 β-sheets) domain that allows the accessory subunit to homodimerize. Second, both subunits of arthropods and tunicates have become shorter and evolved approximately twice as rapidly as their vertebrate homologs. And third, nematodes have lost the gene for the accessory subunit, which was accompanied by the loss of its interacting domain in the catalytic subunit of pol γ, and they show the highest rate of molecular evolution among all animal taxa. These findings correlate well with the mtDNA genomic features of each group described above, and with their modes of DNA replication, although a substantive amount of biochemical work is needed to draw conclusive links regarding the latter. Describing the parallels between evolution of pol γ and metazoan mtDNA architecture may also help in understanding the processes that lead to mitochondrial dysfunction and to human disease-related phenotypes. © The Author(s) 2015. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

  17. Ultrasound Imaging of Testes and Epididymides of Normal and Infertile Breeding Bulls

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    Khalid Mahmood Ali, Nazir Ahmad*, Nafees Akhtar, Shujait Ali, Maqbool Ahmad and Muhammad Younis1

    2011-10-01

    Full Text Available Echotexture of testes and epididymides from 10 slaughtered male buffaloes was studied. Diameter of testis and mediastinum testis was measured by ultrasound and compared with respective values taken by calipers. Testes and epididymides of another 10 fertile and 10 infertile breeding bulls were examined in vivo through manual palpation and ultrasound imaging. Semen quality of these bulls was also monitored. There were significant (P<0.01 positive correlations between ultrasound and calipers values of all parameters. The testicular parenchyma of fertile bulls was uniformly homogeneous and moderately echogenic. Epididymal tail was more heterogeneous and less echogenic, while epididymal head was homogeneous and less echogenic, than the testicular parenchyma. The epididymal body appeared as hypoechoic structure with echogenic margin. Among 10 infertile bulls, nine had poor semen quality, while one bull failed to give any ejaculate. On ultrasonography, six bulls showed abnormalities in their scrotal echotexture. Among these, one had an abundance of hyperechoic areas scattered in the testicular parenchyma, some of these showed acoustic shadowing, showing testicular degenerations with mineralization. The second bull showed many anechoic areas in the testes and epididymal head, demarcated from the rest of the organ by well defined margins. In the third bull, three-fourth of the right testis showed hyperechoic areas, suspected of testicular degeneration with mineralization. The fourth bull had two anechoic areas in one testis assumed to represent dilated blood vessel. The fifth bull showed small hyperechoic areas within the testicular parenchyma. The sixth bull showed an anechoic area with distinct hyperechogenic margin below the testicular tunics. The remaining four bulls had normal echogenicity of testes and epididymides in spite of poor semen quality. In conclusion, diagnostic ultrasound may be included in breeding soundness examination of breeding

  18. Reference-free population genomics from next-generation transcriptome data and the vertebrate-invertebrate gap.

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    Philippe Gayral

    2013-04-01

    Full Text Available In animals, the population genomic literature is dominated by two taxa, namely mammals and drosophilids, in which fully sequenced, well-annotated genomes have been available for years. Data from other metazoan phyla are scarce, probably because the vast majority of living species still lack a closely related reference genome. Here we achieve de novo, reference-free population genomic analysis from wild samples in five non-model animal species, based on next-generation sequencing transcriptome data. We introduce a pipe-line for cDNA assembly, read mapping, SNP/genotype calling, and data cleaning, with specific focus on the issue of hidden paralogy detection. In two species for which a reference genome is available, similar results were obtained whether the reference was used or not, demonstrating the robustness of our de novo inferences. The population genomic profile of a hare, a turtle, an oyster, a tunicate, and a termite were found to be intermediate between those of human and Drosophila, indicating that the discordant genomic diversity patterns that have been reported between these two species do not reflect a generalized vertebrate versus invertebrate gap. The genomic average diversity was generally higher in invertebrates than in vertebrates (with the notable exception of termite, in agreement with the notion that population size tends to be larger in the former than in the latter. The non-synonymous to synonymous ratio, however, did not differ significantly between vertebrates and invertebrates, even though it was negatively correlated with genetic diversity within each of the two groups. This study opens promising perspective regarding genome-wide population analyses of non-model organisms and the influence of population size on non-synonymous versus synonymous diversity.

  19. Evolutionary Genomics of Life in (and from) the Sea

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    Boore, Jeffrey L.; Dehal, Paramvir; Fuerstenberg, Susan I.

    2006-01-09

    High throughput genome sequencing centers that were originally built for the Human Genome Project (Lander et al., 2001; Venter et al., 2001) have now become an engine for comparative genomics. The six largest centers alone are now producing over 150 billion nucleotides per year, more than 50 times the amount of DNA in the human genome, and nearly all of this is directed at projects that promise great insights into the pattern and processes of evolution. Unfortunately, this data is being produced at a pace far exceeding the capacity of the scientific community to provide insightful analysis, and few scientists with training and experience in evolutionary biology have played prominent roles to date. One of the consequences is that poor quality analyses are typical; for example, orthology among genes is generally determined by simple measures of sequence similarity, when this has been discredited by molecular evolutionary biologists decades ago. Here we discuss the how genomes are chosen for sequencing and how the scientific community can have input. We describe the PhIGs database and web tools (Dehal and Boore 2005a; http://PhIGs.org), which provide phylogenetic analysis of all gene families for all completely sequenced genomes and the associated 'Synteny Viewer', which allows comparisons of the relative positions of orthologous genes. This is the best tool available for inferring gene function across multiple genomes. We also describe how we have used the PhIGs methods with the whole genome sequences of a tunicate, fish, mouse, and human to conclusively demonstrate that two rounds of whole genome duplication occurred at the base of vertebrates (Dehal and Boore 2005b). This evidence is found in the large scale structure of the positions of paralogous genes that arose from duplications inferred by evolutionary analysis to have occurred at the base of vertebrates.

  20. Phosphotyrosine phosphatase R3 receptors: Origin, evolution and structural diversification.

    Directory of Open Access Journals (Sweden)

    Javier U Chicote

    Full Text Available Subtype R3 phosphotyrosine phosphatase receptors (R3 RPTPs are single-spanning membrane proteins characterized by a unique modular composition of extracellular fibronectin repeats and a single cytoplasmatic protein tyrosine phosphatase (PTP domain. Vertebrate R3 RPTPs consist of five members: PTPRB, PTPRJ, PTPRH and PTPRO, which dephosphorylate tyrosine residues, and PTPRQ, which dephosphorylates phophoinositides. R3 RPTPs are considered novel therapeutic targets in several pathologies such as ear diseases, nephrotic syndromes and cancer. R3 RPTP vertebrate receptors, as well as their known invertebrate counterparts from animal models: PTP52F, PTP10D and PTP4e from the fruitfly Drosophila melanogaster and F44G4.8/DEP-1 from the nematode Caenorhabditis elegans, participate in the regulation of cellular activities including cell growth and differentiation. Despite sharing structural and functional properties, the evolutionary relationships between vertebrate and invertebrate R3 RPTPs are not fully understood. Here we gathered R3 RPTPs from organisms covering a broad evolutionary distance, annotated their structure and analyzed their phylogenetic relationships. We show that R3 RPTPs (i have probably originated in the common ancestor of animals (metazoans, (ii are variants of a single ancestral gene in protostomes (arthropods, annelids and nematodes; (iii a likely duplication of this ancestral gene in invertebrate deuterostomes (echinodermes, hemichordates and tunicates generated the precursors of PTPRQ and PTPRB genes, and (iv R3 RPTP groups are monophyletic in vertebrates and have specific conserved structural characteristics. These findings could have implications for the interpretation of past studies and provide a framework for future studies and functional analysis of this important family of proteins.

  1. Hydrocele with surprise. Case report and rewiew of literature.

    Science.gov (United States)

    Albino, Giuseppe; Nenna, Rosanna; Inchingolo, Cosimo Damiano; Marucco, Ettore Cirillo

    2010-12-01

    Hydrocele is a fluid collection between tunica vaginalis and testis. Approximately 10% of testicular cancers occurs with a reactive hydrocele. A 64 year old male presented with a 30 year history of left hydrocele, progressively increasing. Physical examination demonstrated a left large hydrocele, transilluminable, not under pressure. Ultrasonography showed a "corpusculated hydrocele with vaginal hypertrophy jutting out near the head of the epididymis, perhaps caused by an inflammatory reaction [...]" As the patient showed only a minimal discomfort due to the groin swelling, without pain, surgical excision was planned without priority (Class C < 180 days). The surgical exploration showed a paratesticular papillary neoplasm of 3 cm. Intraoperative pathologic examination of a frozen sample demonstrated a "borderline papillary cystadenoma". The Left orchifunicolectomy was performed. The definitive histological examination showed a "left paratesticular Papillary Serous Tumor of Low Malignant Potential (PSTLMP) with morfoimmunoistochemical features of Mullerian origin of neoplasm". Computed tomography (CT) was negative for lymph nodes and metastasis. In agreement with the oncologist we decide for atchful waiting. Despite of rich personal experience of resections and eversions of the vaginal tunic, an urologist rarely observes a case of paratesticular cancer. A PubMed search found 28 citations between 1985 and 2010 with 42 reported cases of paratesticolar neoplasm, including 27 with malignancy features. Rhabdomyosarcoma is the most common, followed by mesothelioma, adenocarcinoma and neuroblastoma. This case report consists of a "borderline" neoplasm for which in the literature, after orchiectomy, it is reported no case of recurrence or metastasis (with a follow up of up to 18 years). The banality of the disease never must underestimate the possibility of an undetected cancer.

  2. A novel parameter by EFOV US for the quantification and the distinction of physiological amount of scrotal fluid and hydrocele: Ratio of testis volume/scrotum volume

    Energy Technology Data Exchange (ETDEWEB)

    Turgut, Ahmet Tuncay [Department of Radiology, Ankara Training and Research Hospital, TR-06590 Ankara (Turkey)], E-mail: ahmettuncayturgut@yahoo.com; Ozden, Eriz [Department of Urology, School of Medicine, Ankara University, TR-06450 Ankara (Turkey); Unsal, Alparslan [Department of Radiology, Turkish Armed Forces Rehabilitation and Care Center, TR-06540 Ankara (Turkey); Department of Radiology, Faculty of Medicine, Adnan Menderes University, TR-09100 Aydin (Turkey); Kosar, Pinar [Department of Radiology, Ankara Training and Research Hospital, TR-06590 Ankara (Turkey); Coskun, Zafer Unsal [Department of Radiology, Turkish Armed Forces Rehabilitation and Care Center, TR-06540 Ankara (Turkey); Kosar, Ugur [Department of Radiology, Ankara Training and Research Hospital, TR-06590 Ankara (Turkey)

    2007-09-15

    Objective: To determine the limits for the amount of tunical fluid enough to be termed as hydrocele by using extended-field of view US technology and to define hydrocele for the first time with standard numerical criteria. Methods: A total of 60 patients were evaluated in this prospective study. Group 1 consisted of 20 patients with unilateral clinical hydrocele. Group 2 included 20 patients referred for scrotal US for reasons other than hydrocele. Group 3 comprised 20 male controls with no scrotal complaints. Testis volume (V{sub t}), scrotum volume (V{sub s}) and V{sub t}/V{sub s} ratio were calculated for each subject by dimensions measured in longitudinal and tranverse planes. Results: Mean V{sub t}/V{sub s} ratio was 0.28 {+-} 0.17 (range, 0.07-0.57), 0.69 {+-} 0.08 (range, 0.53-0.80) and 0.71 {+-} 0.07 (range, 0.61-0.85) for groups 1, 2 and 3, respectively. Mean V{sub t}/V{sub s} for group 1 was significantly lower than those for groups 2 and 3, respectively (p < 0.001 for each). Based on the ROC curve analysis, 0.55 for V{sub t}/V{sub s} ratio was determined as the optimal cut-off point below which the US diagnosis of hydrocele could be made (sensitivity 95.0% and specificity 97.5%). Conclusions: We propose a novel US parameter of V{sub t}/V{sub s} ratio below 0.55 for a standard distinction between hydrocele and physiological amount of scrotal fluid.

  3. Model-assisted measurements of suspension-feeding flow velocities.

    Science.gov (United States)

    Du Clos, Kevin T; Jones, Ian T; Carrier, Tyler J; Brady, Damian C; Jumars, Peter A

    2017-06-01

    Benthic marine suspension feeders provide an important link between benthic and pelagic ecosystems. The strength of this link is determined by suspension-feeding rates. Many studies have measured suspension-feeding rates using indirect clearance-rate methods, which are based on the depletion of suspended particles. Direct methods that measure the flow of water itself are less common, but they can be more broadly applied because, unlike indirect methods, direct methods are not affected by properties of the cleared particles. We present pumping rates for three species of suspension feeders, the clams Mya arenaria and Mercenaria mercenaria and the tunicate Ciona intestinalis , measured using a direct method based on particle image velocimetry (PIV). Past uses of PIV in suspension-feeding studies have been limited by strong laser reflections that interfere with velocity measurements proximate to the siphon. We used a new approach based on fitting PIV-based velocity profile measurements to theoretical profiles from computational fluid dynamic (CFD) models, which allowed us to calculate inhalant siphon Reynolds numbers ( Re ). We used these inhalant Re and measurements of siphon diameters to calculate exhalant Re , pumping rates, and mean inlet and outlet velocities. For the three species studied, inhalant Re ranged from 8 to 520, and exhalant Re ranged from 15 to 1073. Volumetric pumping rates ranged from 1.7 to 7.4 l h -1 for M . arenaria , 0.3 to 3.6 l h -1 for M . m ercenaria and 0.07 to 0.97 l h -1 for C . intestinalis We also used CFD models based on measured pumping rates to calculate capture regions, which reveal the spatial extent of pumped water. Combining PIV data with CFD models may be a valuable approach for future suspension-feeding studies. © 2017. Published by The Company of Biologists Ltd.

  4. Functional role of test cells in swimming larvae of Ascidia malaca: ultrastructural and cytochemical investigations.

    Science.gov (United States)

    Dolcemascolo, G; Gianguzza, M

    2004-01-01

    proteoglycan substances such as glycosaminoglycans (Singley and Solursh, 1980). The reaction has given positive results in test cell granules undergoing emptying, on the outer membrane of the same cells, and on the outer cuticular layer C1 of the larval test. The present investigations, besides confirming the absence of ornament deposition on the test surface by test cells of Ascidia malaca swimming larvae, have evidenced that the secretion products deposited on the larval test surface by test cells consist of glycosaminoglycans, i.e. proteoglycan substances. In agreement with the data reported in the literature, it is hypothesized that the deposition of glycosaminoglycans on the surface of Ascidia malaca larval test makes the larval tunic hydrophilic and thus the larva is able to swim being immersed in water.

  5. The colonization of land by animals: molecular phylogeny and divergence times among arthropods

    Directory of Open Access Journals (Sweden)

    Lyons-Weiler Maureen

    2004-01-01

    Full Text Available Abstract Background The earliest fossil evidence of terrestrial animal activity is from the Ordovician, ~450 million years ago (Ma. However, there are earlier animal fossils, and most molecular clocks suggest a deep origin of animal phyla in the Precambrian, leaving open the possibility that animals colonized land much earlier than the Ordovician. To further investigate the time of colonization of land by animals, we sequenced two nuclear genes, glyceraldehyde-3-phosphate dehydrogenase and enolase, in representative arthropods and conducted phylogenetic and molecular clock analyses of those and other available DNA and protein sequence data. To assess the robustness of animal molecular clocks, we estimated the deuterostome-arthropod divergence using the arthropod fossil record for calibration and tunicate instead of vertebrate sequences to represent Deuterostomia. Nine nuclear and 15 mitochondrial genes were used in phylogenetic analyses and 61 genes were used in molecular clock analyses. Results Significant support was found for the unconventional pairing of myriapods (millipedes and centipedes with chelicerates (spiders, scorpions, horseshoe crabs, etc. using nuclear and mitochondrial genes. Our estimated time for the divergence of millipedes (Diplopoda and centipedes (Chilopoda was 442 ± 50 Ma, and the divergence of insects and crustaceans was estimated as 666 ± 58 Ma. Our results also agree with previous studies suggesting a deep divergence (~1100 – 900 Ma for arthropods and deuterostomes, considerably predating the Cambrian Explosion seen in the animal fossil record. Conclusions The consistent support for a close relationship between myriapods and chelicerates, using mitochondrial and nuclear genes and different methods of analysis, suggests that this unexpected result is not an artefact of analysis. We propose the name Myriochelata for this group of animals, which includes many that immobilize prey with venom. Our molecular clock

  6. Description of morphologic characters in avocado trees (Persea americana. Mill) var. Hass, submitted to gamma radiation of 60 Co

    International Nuclear Information System (INIS)

    Sandoval R, L.

    2004-01-01

    including the witness. without detecting significant modifications in disposition and tamario of the cells of the tunic and the body of the bud veqetativo

  7. Cellulose Synthesis in Agrobacterium tumefaciens

    Energy Technology Data Exchange (ETDEWEB)

    Alan R. White; Ann G. Matthysse

    2004-07-31

    We have cloned the celC gene and its homologue from E. coli, yhjM, in an expression vector and expressed the both genes in E. coli; we have determined that the YhjM protein is able to complement in vitro cellulose synthesis by extracts of A. tumefaciens celC mutants, we have purified the YhjM protein product and are currently examining its enzymatic activity; we have examined whole cell extracts of CelC and various other cellulose mutants and wild type bacteria for the presence of cellulose oligomers and cellulose; we have examined the ability of extracts of wild type and cellulose mutants including CelC to incorporate UDP-14C-glucose into cellulose and into water-soluble, ethanol-insoluble oligosaccharides; we have made mutants which synthesize greater amounts of cellulose than the wild type; and we have examined the role of cellulose in the formation of biofilms by A. tumefaciens. In addition we have examined the ability of a putative cellulose synthase gene from the tunicate Ciona savignyi to complement an A. tumefaciens celA mutant. The greatest difference between our knowledge of bacterial cellulose synthesis when we started this project and current knowledge is that in 1999 when we wrote the original grant very few bacteria were known to synthesize cellulose and genes involved in this synthesis were sequenced only from Acetobacter species, A. tumefaciens and Rhizobium leguminosarum. Currently many bacteria are known to synthesize cellulose and genes that may be involved have been sequenced from more than 10 species of bacteria. This additional information has raised the possibility of attempting to use genes from one bacterium to complement mutants in another bacterium. This will enable us to examine the question of which genes are responsible for the three dimensional structure of cellulose (since this differs among bacterial species) and also to examine the interactions between the various proteins required for cellulose synthesis. We have carried out one

  8. Complete mitochondrial genome of Bugula neritina (Bryozoa, Gymnolaemata, Cheilostomata: phylogenetic position of Bryozoa and phylogeny of lophophorates within the Lophotrochozoa

    Directory of Open Access Journals (Sweden)

    Jang Kuem

    2009-04-01

    Full Text Available Abstract Background The phylogenetic position of Bryozoa is one of the most controversial issues in metazoan phylogeny. In an attempt to address this issue, the first bryozoan mitochondrial genome from Flustrellidra hispida (Gymnolaemata, Ctenostomata was recently sequenced and characterized. Unfortunately, it has extensive gene translocation and extremely reduced size. In addition, the phylogenies obtained from the result were conflicting, so they failed to assign a reliable phylogenetic position to Bryozoa or to clarify lophophorate phylogeny. Thus, it is necessary to characterize further mitochondrial genomes from slowly-evolving bryozoans to obtain a more credible lophophorate phylogeny. Results The complete mitochondrial genome (15,433 bp of Bugula neritina (Bryozoa, Gymnolaemata, Cheilostomata, one of the most widely distributed cheliostome bryozoans, is sequenced. This second bryozoan mitochondrial genome contains the set of 37 components generally observed in other metazoans, differing from that of F. hispida (Bryozoa, Gymnolaemata, Ctenostomata, which has only 36 components with loss of tRNAser(ucn genes. The B. neritina mitochondrial genome possesses 27 multiple noncoding regions. The gene order is more similar to those of the two remaining lophophorate phyla (Brachiopoda and Phoronida and a chiton Katharina tunicate than to that of F. hispida. Phylogenetic analyses based on the nucleotide sequences or amino acid residues of 12 protein-coding genes showed consistently that, within the Lophotrochozoa, the monophyly of the bryozoan class Gymnolaemata (B. neritina and F. hispida was strongly supported and the bryozoan clade was grouped with brachiopods. Echiura appeared as a subtaxon of Annelida, and Entoprocta as a sister taxon of Phoronida. The clade of Bryozoa + Brachiopoda was clustered with either the clade of Annelida-Echiura or that of Phoronida + Entoprocta. Conclusion This study presents the complete mitochondrial genome of a

  9. Fechamento parcial do anel inguinal externo em eqüinos: avaliação pós-operatória e influência na morfologia testicular Partial closure of the equine external inguinal ring: post-operatory evaluation and influence on testicular morphology

    Directory of Open Access Journals (Sweden)

    J.J.M. Rio Tinto

    2004-12-01

    Full Text Available Avaliou-se a influência do fechamento parcial do anel inguinal externo (AIE na morfologia testicular e caracterizaram-se as alterações pós-operatórias decorrentes de sua utilização em seis eqüinos machos. Sob anestesia geral, criou-se um acesso à cavidade vaginal que foi seguido de síntese da túnica vaginal parietal e sutura do AIE ipsilateral em aproximadamente 75% de seu diâmetro (antímero suturado. No antímero contralateral foi realizado procedimento cirúrgico semelhante, mas a sutura do anel inguinal foi removida imediatamente após sua aplicação (antímero controle. No pós-operatório, os animais foram examinados diariamente por quatro semanas. O trauma cirúrgico acarretou degeneração testicular no período pós-operatório e o acesso à cavidade vaginal predispôs à formação de aderências testiculares. O grau de degeneração testicular foi equivalente nos dois antímeros, suturado e controle, e nenhum dos testículos apresentou degeneração. O procedimento mostrou ser uma alternativa viável para o tratamento de hérnias inguinais quando se deseja evitar a orquiectomia.In order to evaluate the influence of parcial closure of the external inguinal ring on testicular morphology and to characterize the local post-operatory changes, six adult horses were submitted to surgery under general anesthesia. The vaginal cavity was opened and approximately 75% of the external inguinal ring was sutured (sutured side. The same procedure was performed on the contralateral side, and the sutures of the external inguinal ring were immediately removed (sham side. The horses were examined daily for four weeks. The surgical procedure induced testicular degeneration and adhesion of the testis to the parietal vaginal tunic. Similar levels of testicular degeneration were detected in both sides (sutured and sham, and none of the testes evaluated had severe degeneration. This procedure can be used for the treatment of inguinal herniation

  10. Evidence for gill slits and a pharynx in Cambrian vetulicolians: implications for the early evolution of deuterostomes

    Directory of Open Access Journals (Sweden)

    Ou Qiang

    2012-10-01

    members of the stem-group deuterostomes; a group best known as the chordates (amphioxus, tunicates, vertebrates, but also including the ambulacrarians (echinoderms, hemichordates, and xenoturbellids. If the latter, first they demonstrate that these members of the stem group show few similarities to the descendant crown group representatives. Second, of the key innovations that underpinned deuterostome success, the earliest and arguably most seminal was the evolution of openings that define the pharyngeal gill slits of hemichordates (and some extinct echinoderms and chordates.

  11. Soft coral abundance on the central Great Barrier Reef: effects of Acanthaster planci, space availability, and aspects of the physical environment

    Science.gov (United States)

    Fabricius, K. E.

    1997-07-01

    The distribution and abundance of soft coral genera on reefs of the central Great Barrier Reef was investigated in relation to reef position, recent history of disturbance, wave exposure, substratum slope and depth. Eighty-five 25 m long transects were surveyed at 10 m depth on windward sides of 14 mid- and outer-shelf reefs. A further 75 transects in different zones on one mid-shelf reef (Davies Reef) between 5 and 30 m depth were investigated. The crown-of-thorns starfish Acanthaster planci had caused large-scale mortality of scleractinians on eight of these reefs five to ten years prior to the study, and as a result, scleractinian cover was only 35-55% of that on the six unimpacted reefs. On the impacted reefs, stony corals with massive and encrusting growths form had smaller average colony diameters but similar or slightly lower numerical abundance. In contrast, mean colony size, cover and abundance of branching stony corals showed no difference between impacted and unimpacted reefs. Twenty-four genera of soft corals (in eight families) were recorded, and none showed different abundance or cover in areas of former A. planci impact, compared to unaffected sites. Similarly, no difference was detected among locations in the numbers or area cover of sponges, tunicates, zoanthids, Halimeda or other macro-algae. Mean soft coral cover was 2 to 5% at 10 m on sheltered mid-shelf reefs, and 12 to 17% on more current-exposed reefs. Highest cover and abundances generally occurred on platforms of outer-shelf reefs exposed to relatively strong currents but low wave energy. On Davies Reef, cover and colony numbers of the families Nephtheidae and Xeniidae were low within the zone of wave impact, in flow-protected bays and lagoons, on shaded steep slopes, and at depths above 10 and below 25 m. In contrast, distributions of genera of the family Alcyoniidae were not related to these physical parameters. The physical conditions of a large proportion of habitats appear "sub

  12. Satellite Derived Seafloor Bathymetry and Habitat Mapping on a Shallow Carbonate Platform: Campeche Bank, México.

    Science.gov (United States)

    Garza-Perez, J. R.; Rankey, E. C.; Rodriguez-Vázquez, R. A.; Naranjo-Garcia, M. J.

    2017-12-01

    Extensive and consistent high-resolution seafloor mapping is a difficult task involving important financial resources, intensive field work and careful planning; thus there is a paucity of this type of mapping products both in spatial distribution and through time. Remote sensed imagery has supported continuous mapping efforts elsewhere, but extensive seafloor mapping, even in shallow regions keeps being elusive. Challenges to this effort include cloud cover, surface sun-glint, and water turbidity caused by sediment resuspension and primary productivity. Nevertheless, using high-quality satellite imagery (Landsat-8 OLI -30x30m/pixel- and GeoEye-1 -2x2m/pixel) and rigorous pre-processing (atmospheric correction, de-glinting and water-column light extinction compensation), resulting data contribute towards the advancement of seafloor mapping. The Yucatan Peninsula in México is a carbonate ramp devoid of significant orographic features and surface water bodies. Its submerged portion is the Campeche Bank, gently sloping towards the Gulf of Mexico. The bottom features several distinct blankets composed by medium-fine sediment (dominated by pelecypods, gastropods, foraminifera, lithoclasts, calcareous peloids and algal nodules, Halimeda plaques and coralline algae fragments), and a reef unit with several bank-type coral reefs. Outside the coral reefs, biotic cover down to 20 m deep is dominated by macroalgae (red, brown, green), coralline and filamentous algae with sharp seasonal changes in abundance, from almost nil during north-winds (Oct. - Jan.) to high during dry (Feb.- May) and rainy seasons (Jun. - Sept.), with changes of dominance by algae groups between dry and rainy seasons. This bloom is favored by increases in sunlight and nutrients carried by the Caribbean current upwelling washing the Campeche Bank. Beyond 20 m depth, sandy plains dominate the seascape. Corals, octocorals, sponges and tunicates are spatially restricted to bottoms with thin layers of

  13. Systematics of the southern African genus Ixia (Iridaceae. 2. The filiform-leaved I. capillaris complex

    Directory of Open Access Journals (Sweden)

    P. Goldblatt

    2008-08-01

    Full Text Available Field study and associated examination of herbarium specimens of the filiform-leaved species of section Morphixia o f the South African genus Ixia L. have resulted in an increase in the number of species with this derived leaf type.  Ixia capillaris and  I. pauciflora have until now been the only species with such leaves and they have not been regarded as immediately related in past accounts of the genus. The two foliage leaves, typically less than 2 mm w ide, with a leathery to succulent texture, and lacking a raised central vein or margins, are specialized in the genus. Associated finely fibrous corm tunics, spikes of 1-3 flowers, and when present, short, thread-like lateral branches, usually bearing 1 or 2 flowers, provide supporting evidence that the group is monophyletic.  I. capillaris as interpreted until now. comprises four species, three of them new and described here, and the large-flowered I. pauciflora includes two species, one of these described here. While I. capillaris has a branched stem, radially symmetric flowers with a penanth tube (4—5—7(—8 mm long, tepals 11-15 mm long and thus substantially exceeding the tube, filaments typically exserted 1-2 mm. and anthers (3—4—5 mm long. I. exiliflora has a tube 8-10 mm long and ± as long as the tepals, included filaments, and anthers 3.5—4.0 mm long. The new  I. dieramoides also has included filaments but a perianth tube 13—18(—22 mm long and tepals 11-18 mm long. A third new species. I. reclinata has large flowers with a tube 13-15 mm long, tepals 16-21 mm long, and unilateral, decimate stamens with the filaments exserted 8-10 mm. and anthers 4-5 mm long. Typical  I. pauciflora has flowers with unilateral stamens and filaments exserted 2-6 mm from the flower and anthers prominently displayed, but specimens until now included in that species w ith short, included filaments 3-5 mm long and anthers half included in the tube, are here regarded as I. dieramoides. The I

  14. A revision of Ornithogalum subgenus Aspasia section Aspasia, the chincherinchees (Hyacinthaceae

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    J. C. Manning

    2007-08-01

    Full Text Available The species of Ornithogalum L. subgenus Aspasia section Aspasia are revised. Section Aspasia is defined by a rosette of  lanceolate to oblong leaves; large, boat-shaped, ± petaloid bracts; moderately-sized white, yellow or orange flowers, sometimes with dark central markings; thin-textured, ellipsoid capsules that are enclosed by and concealed within the persistent, papery perianth; and angular, colliculate to echinulate seeds. Twelve species are recognized in the section, separable into three series based on seed morphology. O. conicum is redefined to exclude specimens from the Eastern Cape, which are recognized as O. synanthifolium, and O. conicum subsp.  strictum is raised to species status as O. strictum. The circumscription of O. duhium is expanded to include O.fimbrimarginatum and O. subcoriaceum, previously distinguished on account of their longer styles.Collections from the Roggeveld Escarpment and Klein Roggeveld that were previously included in O. fimbrimaiginatum are recognized as the new species O. corticatum Mart.-Azarin, on the basis of their unusual, thick, cartilaginous outer tunics and puberulous adaxial leaf surface. O. ceresianum is removed from the synonomy of O. thyrsoides and recognized as a distinct species on account of its extensive glossy black tepal markings, winged inner filaments, and glossy black ovary. The poorly known  O. puberuhim is more ftilly described based on several recent collections, and  O. leeupoortense is neotypified in the absence of any original type material.  O. rupestre and O. multifolium are regarded as colour forms of the same species, for which  O. rupestre is the older name. Similarly, O. roussouwii is a depauperate, pale form of O. maculatum and is thus included in the synonomy of that species. The circumscription of O. pruinosum remains unchanged. The species O. haurii, O. diphyllum and O. sephtonii from the Drakensberg Mountains of Eastern Cape and KwaZulu-Natal are excluded from

  15. Layer-by-layer assembly of nanostructured composites: Mechanics and applications

    Science.gov (United States)

    Podsiadlo, Paul

    The development of efficient methods for preparation of nanometer-sized materials and our evolving ability to manipulate the nanoscale objects have brought about a scientific and technological revolution called: nanotechnology. This revolution has been especially driven by discovery of unique nanoscale properties of the nanomaterials which are governed by their inherent size. Today, the total societal impact of nanotechnology is expected to be greater than the combined influences that the silicon integrated circuit, medical imaging, computer-aided engineering, and man-made polymers have had in the last century. Many nanomaterials were also found to possess exceptional mechanical properties. This led to tremendous interest into developing composite materials by exploiting the mechanical properties of these building blocks. In spite of a tremendous volume of work done in the field, preparation of such nanocomposites (NCs) has proven to be elusive due to inability of traditional "top-down" fabrication approaches to effectively harness properties of the nano-scale building blocks. This thesis focuses on preparation of organic/inorganic and solely organic NCs via a bottom-up nano-manufacturing approach called the layer-by-layer (LBL) assembly. Two natural and inexpensive nanoscale building blocks are explored: nanosheets of Na+-montmorillonite clay (MTM) and rod-shaped nanocrystals of cellulose (CNRs). In the first part of the thesis, we present results from systematic study of mechanics of MTM-based NCs. Different compositions are explored with a goal of understanding the nanoscale mechanics. Ultimately, development of a transparent composite with record-high strength and stiffness is presented. In the second part, we present results from LBL assembly of the CNRs. We demonstrate feasibility of assembly and mechanical properties of the resulting films. We also demonstrate preparation of LBL films with anti- reflective properties from tunicate (a sea animal) CNRs. In the

  16. Evolution of the relaxin-like peptide family

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    Tregear Geoffrey W

    2005-02-01

    Full Text Available Abstract Background The relaxin-like peptide family belongs in the insulin superfamily and consists of 7 peptides of high structural but low sequence similarity; relaxin-1, 2 and 3, and the insulin-like (INSL peptides, INSL3, INSL4, INSL5 and INSL6. The functions of relaxin-3, INSL4, INSL5, INSL6 remain uncharacterised. The evolution of this family has been contentious; high sequence variability is seen between closely related species, while distantly related species show high similarity; an invertebrate relaxin sequence has been reported, while a relaxin gene has not been found in the avian and ruminant lineages. Results Sequence similarity searches of genomic and EST data identified homologs of relaxin-like peptides in mammals, and non-mammalian vertebrates such as fish. Phylogenetic analysis was used to resolve the evolution of the family. Searches were unable to identify an invertebrate relaxin-like peptide. The published relaxin cDNA sequence in the tunicate, Ciona intestinalis was not present in the completed C. intestinalis genome. The newly discovered relaxin-3 is likely to be the ancestral relaxin. Multiple relaxin-3-like sequences are present in fugu fish (Takifugu rubripes and zebrafish (Danio rerio, but these appear to be specific to the fish lineage. Possible relaxin-1 and INSL5 homologs were also identified in fish and frog species, placing their emergence prior to mammalia, earlier than previously believed. Furthermore, estimates of synonymous and nonsynonymous substitution rates (dN/dS suggest that the emergence of relaxin-1, INSL4 and INSL6 during mammalia was driven by positive Darwinian selection, hence these peptides are likely to have novel and in the case of relaxin-1, which is still under positive selection in humans and the great apes, possibly still evolving functions. In contrast, relaxin-3 is constrained by strong purifying selection, demonstrating it must have a highly conserved function, supporting its hypothesized

  17. Isolation and genome sequencing of four Arctic marine Psychrobacter strains exhibiting multicopper oxidase activity.

    Science.gov (United States)

    Moghadam, Morteza Shojaei; Albersmeier, Andreas; Winkler, Anika; Cimmino, Lorenzo; Rise, Kjersti; Hohmann-Marriott, Martin Frank; Kalinowski, Jörn; Rückert, Christian; Wentzel, Alexander; Lale, Rahmi

    2016-02-16

    Marine cold-temperature environments are an invaluable source of psychrophilic microbial life for new biodiscoveries. An Arctic marine bacterial strain collection was established consisting of 1448 individual isolates originating from biota, water and sediment samples taken at a various depth in the Barents Sea, North of mainland Norway, with an all year round seawater temperature of 4 °C. The entire collection was subjected to high-throughput screening for detection of extracellular laccase activity with guaiacol as a substrate. In total, 13 laccase-positive isolates were identified, all belonging to the Psychrobacter genus. From the most diverse four strains, based on 16S rRNA gene sequence analysis, all originating from the same Botryllus sp. colonial ascidian tunicate sample, genomic DNA was isolated and genome sequenced using a combined approach of whole genome shotgun and 8 kb mate-pair library sequencing on an Illumina MiSeq platform. The genomes were assembled and revealed genome sizes between 3.29 and 3.52 Mbp with an average G + C content of around 42%, with one to seven plasmids present in the four strains. Bioinformatics based genome mining was performed to describe the metabolic potential of these four strains and to identify gene candidates potentially responsible for the observed laccase-positive phenotype. Up to two different laccase-like multicopper oxidase (LMCO) encoding gene candidates were identified in each of the four strains. Heterologous expression of P11F6-LMCO and P11G5-LMCO2 in Escherichia coli BL21 (DE3) resulted in recombinant proteins exhibiting 2,2'-azino-bis-3-ethylbenzothiazoline-6-sulphonic acid (ABTS) and guaiacol oxidizing activity. Thirteen Psychrobacter species with laccase-positive phenotype were isolated from a collection of Arctic marine bacteria. Four of the isolates were genome sequenced. The overall genome features were similar to other publicly available Psychrobacter genome sequences except for P11G5 harboring seven

  18. Diferenciación genética de cultivares de Ajo por medio de unidades de distancias multivariadas

    Directory of Open Access Journals (Sweden)

    Ligarreto M. Gustavo Adolfo

    1992-06-01

    Full Text Available Genetic Oiferentiation of Cultivars of Garlic Using Measuring Multivariate DistancesMeasuring the similarities between
    biological population groups has always been one of the principal problems of natural sciences. However, with the development in recent decades of our knowledge
    of the genetic variation basis, and improvements in computer capabilities, it has been possible to know the degree of
    diversification between individual populations and groups of populations. In this research by application of multivariate
    analysis it was posible to find the Mahalanobis 02 values that let to estimate the gene tic divergence into cultivars of a
    colombian collection of garlic. The results showed the formulation of three genetic groups, one of them is conformed by genotypes with bulbs almost always unprotected from their sheated tunics, the other groups are composed by covered
    bulbs and are different with each other, not only in its bulbs size, but also height of plant, and illness reactions. The diversity colletion helps very much in the cultivars
    improvement.
    Cuantificar la similaridad genética entre grupos de poblaciones biológicas ha sido uno de los principales problemas de las ciencias naturales. Sin embargo, en las
    últimas decadas, con los grandes avances en el conocimiento de las bases genéticas de la variación y con el desarrollo de los computadores, se ha podido determinar la diversidad entre individuos de una población y entre grupos de poblaciones. En este estudio, mediante análisis multivariados,
    se hallaron los valores 02 de Mahalanobis que permitieron estimar la divergencia genética entre cultivares de una colección colombiana de ajo. Los resultados señalan la formación de 3 grupos genéticos, uno de los cuales está integrado por genotipos con bulbos casi siempre desprovistos de túnicas envolventes, los otros grupos son de bulbos cubiertos y difieren entre sí, principalmente en

  19. The diet of sperm whales (Physeter macrocephalus Linnaeus 1758) off the Azores.

    Science.gov (United States)

    Clarke, M R; Martins, H R; Pascoe, P

    1993-01-29

    Stomach contents from 17 sperm whales, 15 males and two females, caught during commercial activities in 1981-1984 in the Azores region were identified and measured. A total of 28,738 cephalopods and 16 fish were represented in the collections. In addition, there were tunicates in two whales and man-made products in three whales. None of the stomachs were empty. Flesh was present in 94.1% and indigestible fragments alone, including mandibles (beaks) of cephalopods, were present in 5.9% of the stomachs. Twelve species of cephalopod were represented by flesh and 40 species were represented by lower beaks. The cephalopod families contributing food to the whales in this region are, in order of their contribution by estimated mass, the Octopoteuthidae (39.8%), the Histioteuthidae (32.7%), the Architeuthidae (12.1%), the Lepidoteuthidae (4.5%), the Ommastrephidae (3.4%), the Pholidoteuthidae (2.1%), the Cycloteuthidae (1.9%), the Cranchiidae (1.7%) and eight other families each contributing less than 1% by mass. Presence of Gonatus beaks in the stomachs show which whales have migrated southwards to the Azores just prior to capture and the presence of a large Megalocranchia species possibly shows which whales have migrated from higher latitudes off Iceland. However, the presence of Teuthowenia maculata shows which whales came north from the West coast of Africa, just prior to capture. The modal mass of cephalopods consumed is 400-450 g which represents 0.00001 of the whales' body mass. 77.5% of the species eaten have luminous organs and 82% of the species are neutrally buoyant. It seems likely that the sperm whale is obtaining 77% of its food by swimming through luminous shoals of slow-swimming, neutrally bouyant squids and only about 23% by chasing faster swimming, larger cephalopods. Cephalopods not previously recorded from the North Atlantic are Onychoteuthis boreali-japonicus, and Histioteuthis bonnellii corpuscula. Histioteuthis ?miranda may have been collected by the

  20. How insights from cardiovascular developmental biology have impacted the care of infants and children with congenital heart disease.

    Science.gov (United States)

    Chin, Alvin J; Saint-Jeannet, Jean-Pierre; Lo, Cecilia W

    2012-07-01

    To illustrate the impact developmental biology and genetics have already had on the clinical management of the million infants born worldwide each year with CHD, we have chosen three stories which have had particular relevance for pediatric cardiologists, cardiothoracic surgeons, cardiac anesthesiologists, and cardiac nurses. First, we show how Margaret Kirby's finding of the unexpected contribution of an ectodermal cell population - the cranial neural crest - to the aortic arch arteries and arterial pole of the embryonic avian heart provided a key impetus to the field of cardiovascular patterning. Recognition that a majority of patients affected by the neurocristopathy DiGeorge syndrome have a chromosome 22q11 deletion, have also spurred tremendous efforts to characterize the molecular mechanisms contributing to this pathology, assigning a major role to the transcription factor Tbx1. Second, synthesizing the work of the last two decades by many laboratories on a wide gamut of metazoans (invertebrates, tunicates, agnathans, teleosts, lungfish, amphibians, and amniotes), we review the >20 major modifications and additions to the ancient circulatory arrangement composed solely of a unicameral (one-chambered), contractile myocardial tube and a short proximal aorta. Two changes will be discussed in detail - the interposition of a second cardiac chamber in the circulation and the septation of the cardiac ventricle. By comparing the developmental genetic data of several model organisms, we can better understand the origin of the various components of the multicameral (multi-chambered) heart seen in humans. Third, Martina Brueckner's discovery that a faulty axonemal dynein was responsible for the phenotype of the iv/iv mouse (the first mammalian model of human heterotaxy) focused attention on the biology of cilia. We discuss how even the care of the complex cardiac and non-cardiac anomalies seen in heterotaxy syndrome, which have long seemed impervious to advancements in

  1. Description of morphologic characters in avocado trees (Persea americana. Mill) var. Hass, submitted to gamma radiation of {sup 60} Co; Descripcion de caracteres morfologicos en arboles de aguacate (Persea americana. Mill) var. Hass, sometidos a radiacion gama de {sup 60} Co

    Energy Technology Data Exchange (ETDEWEB)

    Sandoval R, L

    2004-07-01

    in samples of you hoist of all the treatments including the witness. without detecting significant modifications in disposition and tamario of the cells of the tunic and the body of the bud veqetativo.

  2. The Tetraspanin-Associated Uroplakins Family (UPK2/3 Is Evolutionarily Related to PTPRQ, a Phosphotyrosine Phosphatase Receptor.

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    Javier U Chicote

    Full Text Available Uroplakins are a widespread group of vertebrate integral membrane proteins that belong to two different families: UPK1a and UPK1b belong to the large tetraspanin (TSPAN gene family, and UPK3a, UPK3b, UPK3c, UPK3d, UPK2a and UPK2b form a family of their own, the UPK2/3 tetraspanin-associated family. In a previous study, we reported that uroplakins first appeared in vertebrates, and that uroplakin tetraspanins (UPK1a and UPK1b should have originated by duplication of an ancestor tetraspanin gene. However, the evolutionary origin of the UPK2/3 family remains unclear. In this study, we provide evidence that the UPK2/3 family originated by gene duplication and domain loss from a protoPTPRQ-like basal deuterostome gene. PTPRQs are members of the subtype R3 tyrosine phosphatase receptor (R3 PTPR family, which are characterized by having a unique modular composition of extracellular fibronectin (FN3 repeats, a transmembrane helix, and a single intra-cytoplasmic phosphotyrosine phophatase (PTP domain. Our assumption of a deuterostome protoPTPRQ-like gene as an ancestor of the UPK2/3 family by gene duplication and loss of its PTP and fibronectin (FN3 domains, excluding the one closest to the transmembrane helix, is based on the following: (i phylogenetic analyses, (ii the existence of an identical intron/exon gene pattern between UPK2/3 and the corresponding genetic region in R3 PTPRs, (iii the conservation of cysteine patterns and protein motifs between UPK2/3 and PTPRQ proteins and, (iv the existence in tunicates, the closest organisms to vertebrates, of two sequences related to PTPRQ; one with the full subtype R3 modular characteristic and another without the PTP domain but with a short cytoplasmic tail with some sequence similarity to that of UPK3a. This finding will facilitate further studies on the structure and function of these important proteins with implications in human diseases.

  3. Toxicology and carcinogenesis studies of formamide (Cas No. 75-12-7) in F344/N rats and B6C3F1 mice (gavage studies).

    Science.gov (United States)

    2008-07-01

    carcinoma (combined) in 80 mg/kg females was significantly increased. The incidences of mineralization of the testicular arteries and testicular tunic were significantly increased in 80 mg/kg males. The incidence of hematopoietic cell proliferation of the spleen was significantly increased in 80 mg/kg males. Formamide gave no evidence for mutagenicity in a series of short-term assays. In three independent Ames assays, formamide was not mutagenic in any of several strains of S. typhimurium tested with and without rat or hamster liver S9 activation enzymes or in E. coli strain WP uvrA pKM101 tested with and without 10% rat liver S9. Negative results were obtained in a test for induction of sex-linked recessive lethal mutations in germ cells of male D. melanogaster treated with formamide either by feeding or injection. Formamide did not induce increases in micronucleated erythrocytes in male or female mice treated by gavage for 3 months. Under the conditions of these 2-year gavage studies, there was no evidence of carcinogenic activity of form-amide in male or female F344/N rats administered 20, 40, or 80 mg/kg. There was clear evidence of carcinogenic activity of formamide in male B6C3F1 mice based on increased incidences of hemangiosarcoma of the liver. There was equivocal evidence of carcinogenic activity of formamide in female B6C3F1 mice based on increased incidences of hepatocellular adenoma or carcinoma (combined). An increased incidence of bone marrow hyperplasia occurred in male rats. Mineralization of the testicular arteries and tunic and hematopoietic cell proliferation of the spleen in male mice were also associated with administration of formamide.

  4. Three Principles of Diversity-Generating Biosynthesis.

    Science.gov (United States)

    Gu, Wenjia; Schmidt, Eric W

    2017-10-17

    Natural products are significant therapeutic agents and valuable drug leads. This is likely owing to their three-dimensional structural complexity, which enables them to form complex interactions with biological targets. Enzymes from natural product biosynthetic pathways show great potential to generate natural product-like compounds and libraries. Many challenges still remain in biosynthesis, such as how to rationally synthesize small molecules with novel structures and how to generate maximum chemical diversity. In this Account, we describe recent advances from our laboratory in the synthesis of natural product-like libraries using natural biosynthetic machinery. Our work has focused on the pat and tru biosynthetic pathways to patellamides, trunkamide, and related compounds from cyanobacterial symbionts in marine tunicates. These belong to the cyanobactin class of natural products, which are part of the larger group of ribosomally synthesized and post-translationally modified peptides (RiPPs). These results have enabled the synthesis of rationally designed small molecules and libraries covering more than 1 million estimated derivatives. Because the RiPPs are translated on the ribosome and then enzymatically modified, they are highly compatible with recombinant technologies. This is important because it means that the resulting natural products, their derivatives, and wholly new compounds can be synthesized using the tools of genetic engineering. The RiPPs also represent possibly the most widespread group of bioactive natural products, although this is in part because of the broad definition of what constitutes a RiPP. In addition, the underlying ideas may form the basis for broad-substrate biosynthetic pathways beyond the RiPPs. For example, some of the ideas about kinetic ordering of broad substrate pathways may apply to polyketide or nonribosomal peptide biosynthesis as well. While making these products, we have sought to understand what makes biosynthetic

  5. Intra-regional transportation of a tugboat fouling community between the ports of recife and natal, northeast Brazil

    Directory of Open Access Journals (Sweden)

    Cristiane Maria Rocha Farrapeira

    2010-06-01

    Full Text Available This study aimed to identify the incrusting and sedentary animals associated with the hull of a tugboat active in the ports of Pernambuco and later loaned to the port of Natal, Rio Grande do Norte. Thus, areas with dense biofouling were scraped and the species then classified in terms of their bioinvasive status for the Brazilian coast. Six were native to Brazil, two were cryptogenic and 16 nonindigenous; nine of the latter were classified as established (Musculus lateralis, Sphenia fragilis, Balanus trigonus, Biflustra savartii, Botrylloides nigrum, Didemnum psammatodes, Herdmania pallida, Microscosmus exasperatus, and Symplegma rubra and three as invasive (Mytilopsis leucophaeta, Amphibalanus reticulatus, and Striatobalanus amaryllis. The presence of M. leucophaeata, Amphibalanus eburneus and A. reticulatus on the boat's hull propitiated their introduction onto the Natal coast. The occurrence of a great number of tunicate species in Natal reflected the port area's benthic diversity and facilitated the inclusion of two bivalves - Musculus lateralis and Sphenia fragilis - found in their siphons and in the interstices between colonies or individuals, respectively. The results show the role of biofouling on boat hulls in the introduction of nonindigenous species and that the port of Recife acts as a source of some species.Este trabalho objetivou identificar os animais incrustantes e sedentários associados ao casco de um rebocador que atuava nos Portos de Pernambuco e foi cedido para o Porto de Natal, Rio Grande do Norte. Áreas com densa bioincrustação foram raspadas e as espécies foram posteriormente classificadas em relação ao status de bioinvasão no litoral brasileiro. Dentre as espécies identificadas, seis eram nativas do Brasil, duas criptogênicas e 16 exóticas. Destas, oito foram classificadas como estabelecidas (Musculus lateralis, Sphenia fragilis, Balanus trigonus, Biflustra savartii, Botrylloides nigrum, Didemnum psammatodes

  6. Analysis of the results of treatment of patients with malignant tumors of the salivary glands

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    V. T. Vayradyan

    2016-01-01

    Full Text Available Objective: improve results of the treatment of patients with malignant salivary gland neoplasm (MSGN.Materials and methods. Analysis of 417 patients suffering from MSGN treated in the Federal State Budgetary Institution “N.N. Blokhin Russian Cancer Research Center” from 1988 to 2014. All the subjects were divided into 4 main groups according to the treatment assigned: group of the surgical treatment – 27.3 % (n = 114, group of the combined treatment (surgery and radiotherapy (RT – 54.0 % (n = 225, group of the complex treatment (surgery, radiotherapy and chemotherapy – 10.5 % (n = 44, group of conservative treatment (radiotherapy and/or chemotherapy – 8.2 % (n = 34.Results. Best 5-year disease-free survival (DFS was observed in patients with localization of the tumor process in the minor salivary glands (MSG, mucosal tunic (MT of mouth (73.2 ± 5.5% and parotid gland (62.3 ± 3.3 %, while the lowest survival rate was observed in tumors of sublingual salivary gland (0% (median was not achieved, p = 0.07. Depending on the morphological variants the best 5-year DFS was observed in groups of myoepithelial carcinoma, and acinar cell carcinoma: 81.3 ± 9.8 and 79.1 ± 8.4 %, respectively (median was not reached, p > 0.05; the worst survival rate was observed in patients with squamous cell carcinoma, carcinoma of the salivary ducts and adenocarcinoma: 45.7 ± 15.5; 50.3 ± 12.7 and 53.0 ± 5.5 %, respectively (median was not reached. In poorly differentiated tumors (G3 5-year DFS was lowest and was equal to 32.7 ± 4.1 %, while in G1 tumors – 83.6 ± 3.1% (p = 0.000001. In G3 tumors addition of radiotherapy to the surgery significantly reduces the incidence of local recurrence - from 51.4 % (surgical treatment alone down to 33.8 % (combined treatment (p = 0.08. There was a significant decrease in 5-year disease-free survival rate from 74.2 ± 2.6 % without any adverse pathological signs down to 37.9 ± 5.4% in the presence of these signs

  7. PECULIARITIES OF THE BABESIOUS INFECTION INFLUENCE TO NONLINER MICE STOMACH STRUCTURE

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    Pokhil S.I

    2014-10-01

    status, volum, size, syn-, holo-, skeletotopy. Microscopic examination was carried out in a traditional way. Bits of the material were removed, washed, fixed in 12 % formalaldehyde, subjected to postfixation and dehydrated (providing have been worked in standart algoritm’s. Sections were contrasted by hematoxsilin and eosin, azur and eosin, Brashe, sudan III- sudan IV, analysed under a microscope LOMU (LOMO, Russia: x 300; x400; 1350 and photographed with a digital camera “Canon EOS-3000”. Results. Clinically disease manifestations of babesiosis are caused by the asexual reproductive stage of the organism in digestive system organs, erythrocytes of the host and the subsequent lysis of same host cells. Consequently, there is a very broad clinical spectrum which is probably directly reflective of the level of parasitemia in the blood. Morphologically: gastrical tunics (mucosal, muscular, serosal of the control groupe animals are very visible and norm. The changes of abdominal microthopography it was not found. Megalia, oedema, hyper-, atrophia, inflammatory processus are absent. It was found out that a pronounced structural-functional changes of stomach, submucosal lymphoid tissues and endothelium of gastrical microvessels took place during first days of the observation of animals with the babesiosis. The above regression was attributed to development of thrombosis, stasis, trophic changes, development of destruction and necrosis. Characteristic morphological signs consisted of changes in the nucleus/cytoplasm ratio of cells, development of lympho-leucocellular, lympho-hystiocellular infiltration, proliferation, vacuolization of cytoplasm, caryorexis, transformation of chromatin, appearance of megakaryocytes in the bloodstream and their markedly increased count. Conclusions: macro- and microscopic changes in the stomach of 4-6-week-old nonliner female mice (with the babesiosis were with the phase character, have been depended upon terms of the début of babesiosis

  8. Parâmetros morfofisiológicos testiculares de camundongos (Mus musculus suplementados com geleia real Morphophysiological parameters of mice (Mus musculus testicles supplemented with royal jelly

    Directory of Open Access Journals (Sweden)

    A.C.T. Morais

    2009-02-01

    length of seminiferous tubules, tubular length per testicle gram, tubulossomatic and leydigossomatic indexes and the value of volumetric proportion related to tunic, seminiferous epithelium, blood vessel, and lymphatic vessel. Differences between T1 and T3 about the seminiferous tubules and intertubular space were found.

  9. Forage fauna in the diet of bigeye tuna (Thunnus obesus in the western tropical Atlantic Ocean

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    Teodoro Vaske Júnior

    2012-03-01

    Full Text Available A total of 291 stomachs of bigeye tuna caught in the Western tropical Atlantic Ocean ranging between 60 and 195 cm fork length, were analyzed between October 2004 and November 2005. The vertical distribution of prey was studied in relation to their feeding strategies. A total of 83 prey items were identified of which 46 were fishes, represented mainly by brephoepipelagic, and meso-bathypelagic fishes; 20 cephalopods, 13 pelagic crustaceans, one tunicate, one heteropod and one pteropod. The Caribbean pomfret Brama caribbea was the most important food item, followed by other mesopelagic fishes such as Alepisaurus ferox, Omosudis lowei, Gempylus serpens, Brama brama and Diretmus argenteus. The squid Ornithoteuthis antillarum was the main preyed-on cephalopod, and the crustaceans Caridea and Brachyuran megalopae were also important food items. The feeding may occur continuously, all the time, or at least during the greater part of the day or night, as part of the feeding strategy to prey upon a vertically scattered small prey distributed in the water column. The relative equality in the proportions of surface, mid-water and deep-water prey organisms reflects the behavior of constant vertical displacement in the search for prey. Although the bigeye tuna prefers subthermocline layers, most of its prey items perform diel migrations and can be preyed on both near the surface and in deeper waters.Um total de 291 estômagos de albacoras-bandolins capturadas no oceano Atlântico tropical oeste variando entre 60 e 195 cm de comprimento furcal, foram analisados entre outubro de 2004 e dezembro de 2005. A distribuição vertical das presas foi estudada em relação às estratégias alimentares. Um total de 83 itens alimentares foi identificado dos quais 46 foram peixes representados principalmente por peixes brefoepipelágicos e mesopelágicos, 20 cefalópodes, 13 crustáceos pelágicos, um tunicado, um heterópode e um pterópode. A palombeta

  10. Αναζητώντας την εικόνα του Ελκομένου της Μονεμβασίας. Το χαμένο παλλάδιο της πόλης και η επίδρασή του στα υστεροβυζαντινά μνημεία του νότιου ελλαδικού χώρου

    Directory of Open Access Journals (Sweden)

    Βασιλική ΦΩΣΚΟΛΟΥ

    2008-09-01

    Full Text Available   Vassiliki FoskolouTracing the Monemvasia Icon of Christ Helkomenos. The City's lost Palladium and its Influence on the Late Byzantine Monuments of Southern GreeceThe study's aim is to trace the now lost Monemvasia icon of Christ Helkomenos. Our knowledge of the city's celebrated palladium is confined to fragmentary information deriving from narrative sources. Specifically, we know that it was transferred by Isaac Comnenos to Constantinople in the late 12th century; as for the scene represented on the icon, our sole information comes from an epigram by John Apokaukos.The written sources as well as some recent oral testimonies, reveal also the icon's importance to local tradition; this leads us to the thought that the famous icon might have influenced the artistic production of southern Greece. The research resulted to the conclusion that a specific iconographie type of Christ Helkomenos is widely diffused throughout the late Byzantine monuments of this area, especially of Laconia (Peloponnese. In this iconographie type, Jesus, wearing a red tunic and a crown of thorns, is standing facing the Cross, which is already fixed on the ground with a ladder standing against it. This basic notion is in some examples enriched with secondary figures such as Roman soldiers accompanying Jesus, or the Jewish prelate. The latter, pointing towards the symbol of Passion, is ordering Jesus to ascend, by the exclaiming word «ἀνάβηθι», which is usually inscribed at the background of the scene.Since G. Millet's days (1916, scholars have already expressed assumptions regarding a probable relation between these depictions and the lost icon. However, having as a starting point the above -quite appealing- thought, and based on the currently available evidence, we must pose two questions, presented below.The theme of Christ Helkomenos is depicted in Byzantine Art in two different iconographie forms. The theme, moreover, does not belong to the illustrations of

  11. Morfología y anatomía del género Androcymbium (Colchicaceae en Suráfrica Occidental.

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    Pedrola-Montfort, J.

    2003-12-01

    Full Text Available Morphological and anatomical leaf studies were made in 32 populations belonging to 17 taxa of the genus Androcymbium in Southwest Africa. The morphological characters studied were corm and tunic characteristics, and number, distribution, shape, size, section, and color of leaves and bracts. The micromorphological characters were the leaf indument on both surface and margin, shape and size of epidermic cells, type and amount of stomata. Finally, the anatomical characters were mesophyll cell types, epidermic cell sizes, cellular wall types, size of central epidermic cells related to the other epidermic cells, and amount of idioblasts. The results showed a great heterogeneity in almost all characters analyzed. However, macromorphological characteristics related to color and shape of leaves and bracts in the genus Androcymbium could be used as indicators of taxonomic affinities among species. Conversely, the micromorphological and anatomical characteristics studied showed a great variation of types that does not agree with the interspecific relationships established from morphological, allozymatic or cpDNA RFLP data in other research carried out within the genus.

    Se realizaron estudios morfológicos y anatómicos de las partes vegetativas en 32 poblaciones pertenecientes a 17 taxones del género Androcymbium en Suráfrica Occidental. Los caracteres morfológicos estudiados fueron las características del cormo y de las túnicas. y número. distribución. forma, tamaño. sección. y color de las hojas y brácteas. Los caracteres micromorfológicos estudiados fueron el indumento en la superficie y margen de la hoja. forma y tamaño de las células epidérmicas, y tipo y cantidad de estomas. Finalmente. los caracteres anatómicos fueron el tipo de células del mesofilo, tamaño de las células epidérmicas, tipo de pared celular, tamaño de las células epidérmicas centrales comparado con el resto de células de la l

  12. Clavanin bacterial sepsis control using a novel methacrylate nanocarrier

    Directory of Open Access Journals (Sweden)

    Saúde ACM

    2014-10-01

    Full Text Available Amanda CM Saúde,1 Alicia S Ombredane,1 Osmar N Silva,1 João ARG Barbosa,1,2 Susana E Moreno,3 Ana Claudia Guerra Araujo,4 Rosana Falcão,4 Luciano P Silva,4 Simoni C Dias,1 Octávio L Franco1,3 1Programa de Pós Graduação em Ciências Genômicas e Biotecnologia, Centro de Análises Proteômicas e Bioquímicas, Universidade Católica de Brasília, Brasília, FD, Brazil; 2Laboratório de Biofísica-Departamento de Biologia Celular-IB, Universidade de Brasília – UNB, DF, Brazil; 3Universidade Católica Dom Bosco – UCDB, Campo Grande, MS, Brazil; 4Empresa Brasileira de Pesquisa Agropecuária – EMBRAPA – Recursos Genéticos e Biotecnologia, Brasília, DF, Brazil Abstract: Controlling human pathogenic bacteria is a worldwide problem due to increasing bacterial resistance. This has prompted a number of studies investigating peptides isolated from marine animals as a possible alternative for control of human pathogen infections. Clavanins are antimicrobial peptides isolated from the marine tunicate Styela clava, showing 23 amino acid residues in length, cationic properties, and also high bactericidal activity. In spite of clear benefits from the use of peptides, currently 95% of peptide properties have limited pharmaceutical applicability, such as low solubility and short half-life in the circulatory system. Here, nanobiotechnology was used to encapsulate clavanin A in order to develop nanoantibiotics against bacterial sepsis. Clavanin was nanostructured using EUDRAGIT® L 100-55 and RS 30 D solution (3:1 w:w. Atomic force, scanning electron microscopy and dynamic light scattering showed nanoparticles ranging from 120 to 372 nm in diameter, with a zeta potential of -7.16 mV and a polydispersity index of 0.123. Encapsulation rate of 98% was assessed by reversed-phase chromatography. In vitro bioassays showed that the nanostructured clavanin was partially able to control development of Staphylococcus aureus, Klebsiella pneumoniae, and

  13. Exploration of the West Florida Shelf Blue Holes Investigation of Physical and Biological Characteristics and Archaeological Implications of Unique Karst Features

    Science.gov (United States)

    Culter, J. K.

    2006-12-01

    of the documentation of the features included; vertical video transects, still photography, collections of biota, placement of recording thermographs and conductivity meters, collection of bottom sediment and rocks. During the course of the investigation a previously unknown cave feature over 45 meters in height and 76 meters in bottom diameter was discovered and dubbed Megadome. The cave is connected to the Gulf by a circular shaft approximately 0.75 meters in diameter and 11 meters in length. Instrumentation placed at Megadome revealed lunar tidal period water exchange, possible freshwater outflow and water movement in response to hurricanes. The upper portion of the cave contains a fouling community of sponges worms, tunicates and other organisms. A sink hole off the mouth of Tampa Bay was shown to contain a saltwater spring, venting at 72 m (235 fsw). Research is continuing. This research has been supported by a grant from NOAA, Ocean Exploration Program and Mote Marine Laboratory.

  14. Utilização de probiótico, ácido orgânico e antibiótico em dietas para coelhos em crescimento: ensaio de digestibilidade, avaliação da morfometria intestinal e desempenho Utilization of probiotic, organic acid and antibiotic in diets for growing rabbits: essay of digestibility, evaluation of intestinal morphometry and performance

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    Andrea Cristiane Michelan

    2002-11-01

    animais recebendo dietas com inclusão de ácido fumárico, ácido fumárico + bacitracina de zinco e com a dieta contendo os três aditivos. Tanto o peso, como o rendimento de carcaça, foram maiores para os animais alimentados com as dietas, contendo ácido fumárico ou ácido fumárico + bacitracina de zinco. Não houve efeito dos tratamentos sobre o peso do fígado, rins e coração.Three experiments, an essay of digestibility, other of morphometrical intestinal evaluation and of performance were carried out to evaluate the effects of inclusion of Calsporin® (0,03%, fumaric acid (1,5% and zinc bacitracin with 15% of activity (0,10% in diets, separated or combined, on utilization of dry matter, crude protein, neutral detergent fiber, gross energy and the morphometrical jejunal analysis and the essay performed of growing rabbits. For the digestibility essay 64 White New Zealand rabbits were used, half of each sex, 50 days old, distributed on a completly randomized design with eight treatments and eight replicates. There was no difference for the digestibility coefficients of dry matter, organic matter, crude protein, neutral detergent fiber and gross energy among the treatments. For the morphometrical jejunal analysis, 100 White New Zealand rabbits were slaughtered, four in the begining of the experiment, with 35 days old, and four animals per treatment at 50, 60, and 75 days old. The inclusion of the additives in the diet, separated or combined, had no effect on the jejunal wall , muscularis external tunica and the total wall morphometry of the growing rabbits. However the thickness of mucosal tunic decreased linearly with the age of rabbits. For the performed essay, 176 White New Zealand rabbits were used, half of each sex, from 35 to 75 days old, allocated in a completely randomized design, with eight treatments, 11 replicates and two animals for each replicate. The inclusion of the additives, separated or combined, had no effect on the performance from 35 to 50

  15. Pigmentação testicular em Physalaemus nattereri (Steindachner (Amphibia, Anura com observações anatômicas sobre o sistema pigmentar extracutâneo Testicular pigmentation in Physalaemus nattereri (Steindachner (Amphibia, Anura with anatomical observations on the extracutaneous pigmentary system

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    Classius de Oliveira

    2005-06-01

    fibrous connective tissue, commonly unprovided of pigments. This study tried to analyze the morphological characteristics of rare and conspicuous pigment-containing cells and their relationship with other structures. The pigment cells are variously and indistinctly also termed Kuppfer cells in the liver, pigment cells, extracutaneous pigment cells, pigmented macrophages, melanomacrophages, melanophage, melanophores and melanocytes in the liver, spleen and kidney and other visceral structures of exothermic vertebrates. Ten male samples of Physalaemus nattereri (Steindachner, 1863 (Leptodactylidae were used. After macroscopic analyses, the testicular fragments were submitted to the histological routine, fixed with karnovisky, embedded Historesin and coloration with Haematoxylin/Eosin. A rare peculiarity was the presence of numerous pigment-containing cells (melanocytes randomly distributed in the albuginea tunic and testicular interstitium, giving the testes a dark brown coloration. This unusual characteristic has been rarely described and in other lower vertebrates, the pigment cells can be found in different organs, constituting an extracutaneous pigmentary system of unknown function. Further, it was identified a conspicuous variation, as to presence and distribution pattern due to possible species-specific aspects. However, histologically there is no difference in the germ epithelium arrangement. Between the seminiferous locules, there is an inter-locular tissue composed by Leydig interstitial cells, fibroblasts, efferent ductules, melanocytes and blood vessels. This inter-locular tissue is relatively scarce, presenting melanocytes in all specimens analyzed intimate associated with blood vessels. They are irregular cells with numerous melanosomes and long cytoplasmic processes.

  16. The wall painting on the western façade and the lunette of the southern portal of St. Nicholas in Ljuboten

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    Radujko Milan

    2008-01-01

    pilaster beside the entrance, by the traces of his robes, but this was insufficient for establishing what category of saints he belongs; there was a standing image of a holy warrior in a niche, clad in a tunic and cloak, while the outermost northern pilaster was occupied by the image of a holy martyr. Evidence of the zone of the busts (between the figures and the roof is to be seen only fragmentarily (above the figure of the patron with the traces of clothing that was typical for martyrs. The depictions in the lunette and in the niches were framed by ornamental bands but it is not known what the socle looked like. Above the southern entrance there was a bust of St. Nicholas, recognizable by the remains of presentations of Christ and the Mother of God, who, on the images of this saint, were holding out a Gospel and an omophorion to this courageous hierarch. The painting of external façades was a widely cultivated feature in the region of Macedonia, from the twelfth century at the very latest. According to the volume of façade surfaces covered with frescoes, Ljuboten belongs to the churches in which ornamentation of this kind occupied a significant place. In keeping with a practice that had been cultivated for centuries, the painter chose the façades that had an entrance and portals as the basis for his painting, and as the starting point for the gradation of themes according to their importance. The frescoes on the west façade, where it concerns the position of the details in the whole, follow a program topology that is typical of the external ornamentation of Late Antiquity and the Middle Ages. The entrance to the church was already reserved in the time of Constantine the Great, for the visualization of the religious and legal aspects of the donor's undertaking. The general features of the art of this epoch included also the donor's portrait supraporta. Positioned in such a way for the merits of the founder already to be visible on entering the churchyard, the portrait

  17. The fresco at the entrance to Danilo II church of the Mother of God at Peć

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    Milanović Vesna

    2004-01-01

    particular elements of the unconventional iconographic assembly of the image concerned, as well as principled or conditional analogies or "borrowings". Among the iconographic motives that render the solution of the Mother of God's image above the entrance to Danilo's endowment in Peć unique and unconventional, and to which this paper pays particular attention, are the following: the ochre-golden vessel with Christ-Amnos (the liturgical Lamb on the breasts of the Mother of God, the symbolic red colored aura οι glory around the figure of the Child, identical with the interior of the vessel and the unusual details of the costume of the Mother of God that otherwise do not appear in the other, numerous images of the Mother of God in the frescoes of Archbishop Danilo in Peć. As for the details of the costume, an appropriate place in the text is devoted, firstly, to considering the phenomenon of the particularly accentuated ochre-golden vertical bands on her tunic, as symbolic rivers of grace (potamoi, as well as the towel that like the liturgical enchiridion, tucked into the belt, peeps from beneath the vessel with Christ Amnos, identical to the appearance of the shirt the infant is wearing. It was established that through the appropriate aspects of meaning that can be attributed to them, all the said elements of the picture are linked in their own specific way with the mystery of the Eucharist itself, that is to say, with the central event of the liturgy. One can say the same regarding the posture of the figure of the Mother of God - representing her in a twofold capacity, as the supplicant and the recipient of divine grace, although with the choice of the atypical variant of the orans posture of the figure, this latter aspect is dominant, giving the former a special significance. The examination of the possible meanings of each of the distinctive elements in the formal arrangement of the image of the Mother of God, by themselves, and their inter-relationship therefore, leads