Biosurfactant Producing Microbes from Oil Contaminated Soil - Isolation, Screening and Characterization

OpenAIRE

, A Pandey; , D Nandi; , N Prasad; , S Arora

2016-01-01

Th1s paper bas1cally deals W1th 1solat10n, productıon and characterızatıon of biosurfactant producing microbes from oil contaminated soil sample. In this paper, we are comparing and discussing different methods to screen & characterize microbes from soil which can degrade oil due to their biosurfactant producing activity which helps in reduction of surface tension of oil. Oils used to check the biosurfactant activity of microbes, were engine oil and vegetable oil. Further isolation of...

Dependence of the cyanobacterium Prochlorococcus on hydrogen peroxide scavenging microbes for growth at the ocean's surface.

Directory of Open Access Journals (Sweden)

J Jeffrey Morris

2011-02-01

Full Text Available The phytoplankton community in the oligotrophic open ocean is numerically dominated by the cyanobacterium Prochlorococcus, accounting for approximately half of all photosynthesis. In the illuminated euphotic zone where Prochlorococcus grows, reactive oxygen species are continuously generated via photochemical reactions with dissolved organic matter. However, Prochlorococcus genomes lack catalase and additional protective mechanisms common in other aerobes, and this genus is highly susceptible to oxidative damage from hydrogen peroxide (HOOH. In this study we showed that the extant microbial community plays a vital, previously unrecognized role in cross-protecting Prochlorococcus from oxidative damage in the surface mixed layer of the oligotrophic ocean. Microbes are the primary HOOH sink in marine systems, and in the absence of the microbial community, surface waters in the Atlantic and Pacific Ocean accumulated HOOH to concentrations that were lethal for Prochlorococcus cultures. In laboratory experiments with the marine heterotroph Alteromonas sp., serving as a proxy for the natural community of HOOH-degrading microbes, bacterial depletion of HOOH from the extracellular milieu prevented oxidative damage to the cell envelope and photosystems of co-cultured Prochlorococcus, and facilitated the growth of Prochlorococcus at ecologically-relevant cell concentrations. Curiously, the more recently evolved lineages of Prochlorococcus that exploit the surface mixed layer niche were also the most sensitive to HOOH. The genomic streamlining of these evolved lineages during adaptation to the high-light exposed upper euphotic zone thus appears to be coincident with an acquired dependency on the extant HOOH-consuming community. These results underscore the importance of (indirect biotic interactions in establishing niche boundaries, and highlight the impacts that community-level responses to stress may have in the ecological and evolutionary outcomes for co

Efficacy of the d-phenothrin/pyriproxyfen association against mites in naturally co-infested rabbits

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Julio I. Fernandes

2013-05-01

Full Text Available The aim of the present study was to evaluate the efficacy of the d-phenothrin/pyriproxyfen association against Psoroptes ovis, Cheyletiella parasitivorax, and Leporacarus gibbus infestations in naturally co-infested rabbits. Twenty crossbreed (New Zealand White x California rabbits concurrently infested by the three mite species were randomly divided in two groups. All rabbits presented with hyperemia, erythema and formation of crusts in the ear canals caused by P. ovis. Infestations by both C. parasitivorax and L. gibbus were considered asymptomatic in all animals.Ten animals were treated with a 4.4% d-phenothrin and 0.148% pyriproxyfen spray formulation until have their body surface uniformly sprayed, including external ear canals. The other ten rabbits remained untreated, serving as control group. Observations were done on days +7, +14, +21, +28, and +35 post-treatment. The d-phenothrin/pyriproxyfen association showed 100% efficacy against the three mite species and was responsible for the remission of psoroptic mange lesions on treated animals. No signs of intoxication were observed. The results indicate that d-phenothrin/pyriproxyfen spray formulation in a single application is an effective and clinically safe option for the control of different mite infestations in rabbits.

The mucosal firewalls against commensal intestinal microbes.

Science.gov (United States)

Macpherson, Andrew J; Slack, Emma; Geuking, Markus B; McCoy, Kathy D

2009-07-01

Mammals coexist with an extremely dense microbiota in the lower intestine. Despite the constant challenge of small numbers of microbes penetrating the intestinal surface epithelium, it is very unusual for these organisms to cause disease. In this review article, we present the different mucosal firewalls that contain and allow mutualism with the intestinal microbiota.

Parasites in the fossil record: a Cretaceous fauna with isopod-infested decapod crustaceans, infestation patterns through time, and a new ichnotaxon.

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Adiël A Klompmaker

Full Text Available Parasites are common in modern ecosystems and are also known from the fossil record. One of the best preserved and easily recognisable examples of parasitism in the fossil record concerns isopod-induced swellings in the branchial chamber of marine decapod crustaceans. However, very limited quantitative data on the variability of infestation percentages at the species, genus, and family levels are available. Here we provide this type of data for a mid-Cretaceous (upper Lower Cretaceous, upper Albian reef setting at Koskobilo, northern Spain, on the basis of 874 specimens of anomurans and brachyurans. Thirty-seven specimens (4.2%, arranged in ten species, are infested. Anomurans are more heavily infested than brachyurans, variability can be high within genera, and a relationship may exist between the number of specimens and infestation percentage per taxon, possibly suggesting host-specificity. We have also investigated quantitative patterns of infestation through geological time based on 88 infested species (25 anomurans, 55 brachyurans, seven lobsters, and one shrimp, to show that the highest number of infested species can be found in the Late Jurassic, also when corrected for the unequal duration of epochs. The same Late Jurassic peak is observed for the percentage of infested decapod species per epoch. This acme is caused entirely by infested anomurans and brachyurans. Biases (taphonomic and otherwise and causes of variability with regard to the Koskobilo assemblage and infestation patterns through time are discussed. Finally, a new ichnogenus and -species, Kanthyloma crusta, are erected to accommodate such swellings or embedment structures (bioclaustrations.

Delusional infestation.

Science.gov (United States)

Freudenmann, Roland W; Lepping, Peter

2009-10-01

This papers aims at familiarizing psychiatric and nonpsychiatric readers with delusional infestation (DI), also known as delusional parasitosis. It is characterized by the fixed belief of being infested with pathogens against all medical evidence. DI is no single disorder but can occur as a delusional disorder of the somatic type (primary DI) or secondary to numerous other conditions. A set of minimal diagnostic criteria and a classification are provided. Patients with DI pose a truly interdisciplinary problem to the medical system. They avoid psychiatrists and consult dermatologists, microbiologists, or general practitioners but often lose faith in professional medicine. Epidemiology and history suggest that the imaginary pathogens change constantly, while the delusional theme "infestation" is stable and ubiquitous. Patients with self-diagnosed "Morgellons disease" can be seen as a variation of this delusional theme. For clinicians, clinical pathways for efficient diagnostics and etiology-specific treatment are provided. Specialized outpatient clinics in dermatology with a liaison psychiatrist are theoretically best placed to provide care. The most intricate problem is to engage patients in psychiatric therapy. In primary DI, antipsychotics are the treatment of choice, according to limited but sufficient evidence. Pimozide is no longer the treatment of choice for reasons of drug safety. Future research should focus on pathophysiology and the neural basis of DI, as well as on conclusive clinical trials, which are widely lacking. Innovative approaches will be needed, since otherwise patients are unlikely to adhere to any study protocol.

Pilot program (proof of concept) to mitigate Phytophthora ramorum at an infested nursery based on a systems approach

Science.gov (United States)

Gary Chastagner; Marianne Elliott

2017-01-01

The primary purpose of this program was to demonstrate proof of concept of certain mitigation approaches at a repeat P. ramorum-positive nursery site in Washington. Approaches included steam treatment of infested soil areas; creating a gravel “sandwich” above steam-treated and potentially infested soil surfaces; improving drainage systems; required...

Molecular ecology of aquatic microbes

Energy Technology Data Exchange (ETDEWEB)

NONE

1994-12-31

Abstracts of reports are presented from a meeting on Molecular Ecology of Aquatic Microbes. Topics included: opportunities offered to aquatic ecology by molecular biology; the role of aquatic microbes in biogeochemical cycles; characterization of the microbial community; the effect of the environment on aquatic microbes; and the targeting of specific biological processes.

Meet the Microbes through the Microbe World Activities with Microbe the Magnificent and Mighty Microbe.

Science.gov (United States)

Frame, Kathy, Ed.; Ryan, Karen, Ed.

The activities presented in this book are the product of the Community Outreach Initiative of the Microbial Literacy Collaborative (MLC). This activity book presents a balanced view of microbes, their benefits, and the diseases they cause. Each activity starts with an interesting introductory statement and includes goals, activity time, time to…

A novel growth-promoting microbe, Methylobacterium funariae sp. nov., isolated from the leaf surface of a common moss.

Science.gov (United States)

Schauer, S; Kutschera, U

2011-04-01

Land plants (embryophytes) evolved in the presence of prokaryotic microbes. As a result, numerous mutually beneficial associations (symbioses) developed that can be analyzed using a variety of methods. Here we describe the isolation and characterization of a new pink-pigmented facultatively methylotrophic symbiotic bacterium of the genus Methylobacterium (laboratory strain F3.2) that was isolated from the gametophytic phylloids of the common cord moss Funaria hygrometrica Hedw. Plantlets were collected in the field and analyzed in the laboratory. Colonies of methylobacteria were obtained by the agar-impression-method. Based on its unique phenotype (the bacterial cells are characterized by fimbriae-like appendages), a comparative 16S rRNA gene (DNA) sequence analysis, and an average DNA-DNA hybridization value of 8,4 %, compared with its most closely related sister taxon, this isolate is described as a new species, Methylobacterium funariae sp. nov. (type strain F3.2). This new epiphytic bacterium inhabits the leaf surface of "primitive" land plants such as mosses and interacts with its host organism via the secretion of phytohormones (cytokinines, auxins). These external signals are perceived by the plant cells that divide and grow more rapidly than in the absence of their prokaryotic phytosymbionts. We suggest that M. funariae sp. nov. uses methanol emitted from the stomatal pores as principal carbon source for cell metabolism. However, our novel data indicate that, in this unique symbiotic plant-microbe interaction, the uptake of amino acids leached from the surface of the epidermal cells of the green host organism may be of importance as microbial carbon- and nitrogen-source.

Spatial and temporal distribution of house infestation by Triatoma infestans in the Toro Toro municipality, Potosi, Bolivia.

Science.gov (United States)

Espinoza Echeverria, Jorge; Rodriguez, Antonio Nogales; Cortez, Mirko Rojas; Diotaiuti, Liléia Gonçalves; Gorla, David E

2017-02-02

Triatoma infestans is the main vector of Trypanosoma cruzi in Bolivia. The species is present both in domestic and peridomestic structures of rural areas, and in wild ecotopes of the Andean valleys and the Great Chaco. The identification of areas persistently showing low and high house infestation by the vector is important for the management of vector control programs. This study aimed at analyzing the temporal and spatial distribution of house infestation by T. infestans in the Toro Toro municipality (Potosi, Bolivia) between 2009 and 2014, and its association with environmental variables. House infestation and T. infestans density were calculated from entomological surveys of houses in the study area, using a fixed-time effort sampling technique. The spatial heterogeneity of house infestation was evaluated using the SatScan statistic. Association between house infestation with Bioclim variables (Worldclim database) and altitude was analyzed using a generalized linear model (GLM) with a logit link. Model selection was based on the Akaike information criteria after eliminating collinearity between variables using the variable inflation factor. The final model was used to create a probability map of house infestation for the Toro Toro municipality. A total of 73 communities and 16,489 house evaluation events were analyzed. Presence of T. infestans was recorded on 480 house evaluation events, giving an overall annual infestation of 2.9% during the studied period (range 1.5-5.4% in 2009 and 2012). Vector density remained at about 1.25 insects/ house. Infestation was highly aggregated in five clusters, including 11 communities. Relative risk of infestation within these clusters was 1.7-3.9 times the value for the regional average. Four environmental variables were identified as good descriptors of house infestation, explaining 57% of house infestation variability. The model allowed the estimation of a house infestation surface for the Toro Toro municipality. This

Musing over Microbes in Microgravity: Microbial Physiology Flight Experiment

Science.gov (United States)

Schweickart, Randolph; McGinnis, Michael; Bloomberg, Jacob; Lee, Angie (Technical Monitor)

2002-01-01

New York City, the most populated city in the United States, is home to over 8 million humans. This means over 26,000 people per square mile! Imagine, though, what the view would be if you peeked into the world of microscopic organisms. Scientists estimate that a gram of soil may contain up to 1 billion of these microbes, which is as much as the entire human population of China! Scientists also know that the world of microbes is incredibly diverse-possibly 10,000 different species in one gram of soil - more than all the different types of mammals in the world. Microbes fill every niche in the world - from 20 miles below the Earth's surface to 20 miles above, and at temperatures from less than -20 C to hotter than water's boiling point. These organisms are ubiquitous because they can adapt quickly to changing environments, an effective strategy for survival. Although we may not realize it, microbes impact every aspect of our lives. Bacteria and fungi help us break down the food in our bodies, and they help clean the air and water around us. They can also cause the dark, filmy buildup on the shower curtain as well as, more seriously, illness and disease. Since humans and microbes share space on Earth, we can benefit tremendously from a better understanding of the workings and physiology of the microbes. This insight can help prevent any harmful effects on humans, on Earth and in space, as well as reap the benefits they provide. Space flight is a unique environment to study how microbes adapt to changing environmental conditions. To advance ground-based research in the field of microbiology, this STS-107 experiment will investigate how microgravity affects bacteria and fungi. Of particular interest are the growth rates and how they respond to certain antimicrobial substances that will be tested; the same tests will be conducted on Earth at the same times. Comparing the results obtained in flight to those on Earth, we will be able to examine how microgravity induces

Comparison of different methods for ectoparasite infestation detection in Laboratory bred animals and standardization of their health certificate

Directory of Open Access Journals (Sweden)

mohammad Abdigoudarzi

2014-05-01

Full Text Available In order to study external parasites of laboratory reared animals at Razi institute, different methods including brushing of animal's surface body, cellophane tape of body surface, peri-anal cellophane tape test (CTT and skin scrapings and digestive method were applied and collected samples were studied. In addition, field collected rats were tested using brushing method. One mouse had been infested by some mites. Rabbits, rats, mice and guinea pigs had not been infested with external parasites. Field collected rats had been highly infested with mites from the family Laelapidae. The, brushing method was confirmed to be a useful method for mite detection. According to the methods used in this study and these recommended by SOP from international animal breeding centers the CTT method was proposed to be useful for preparing health certificate of laboratory animals at the department of laboratory animal breading at Razi institute.

Effectiveness of a chemical herder in association with in-situ burning of oil spills in ice-infested water

DEFF Research Database (Denmark)

van Gelderen, Laurens; Fritt-Rasmussen, Janne; Jomaas, Grunde

2017-01-01

The average herded slick thickness, surface distribution and burning efficiency of a light crude oil were studied in ice-infested water to determine the effectiveness of a chemical herder in facilitating the in-situ burning of oil. Experiments were performed in a small scale (1.0m2) and an interm......The average herded slick thickness, surface distribution and burning efficiency of a light crude oil were studied in ice-infested water to determine the effectiveness of a chemical herder in facilitating the in-situ burning of oil. Experiments were performed in a small scale (1.0m2...

Monogenean infestations and mortality in wild and cultured Red Sea fishes

Science.gov (United States)

Paperna, I.; Diamant, A.; Overstreet, R. M.

1984-03-01

Hyperinfection by the gill-infesting monogenean Allobivagina sp. (Microcotylea) caused mass mortalities in juveniles of Siganus luridus cultured in seawater earthen ponds and holding tanks in Eilat (Gulf of Aqaba, Red Sea). Other species of Siganus and adults of S. luridus cultured in the same systems acquired a low intensity of infestation. Most hyperinfected fish were emaciated and anaemic with hematocrit values below 10 %. Skin and mouth infestations by the monogenean Benedenia monticelli (Capsaloidea) caused mass mortalities in grey mullets (Mugilidae). These mortalities occurred in large individuals in wild populations of Liza carinata from lagoonal habitats in the Gulf of Suez and in most species of grey mullets cultured in Eilat. The intensity of infestation correlated positively with severity of infestation, and the common sites of infestation corresponded with areas of severe pathological alterations. Spontaneous recovery followed the climax of an epizootic, both for infested S. luridus and infested grey mullets. Decline in infestation coincided with remission of the pathological signs.

Aboveground insect infestation attenuates belowground Agrobacterium-mediated genetic transformation.

Science.gov (United States)

Song, Geun Cheol; Lee, Soohyun; Hong, Jaehwa; Choi, Hye Kyung; Hong, Gun Hyong; Bae, Dong-Won; Mysore, Kirankumar S; Park, Yong-Soon; Ryu, Choong-Min

2015-07-01

Agrobacterium tumefaciens causes crown gall disease. Although Agrobacterium can be popularly used for genetic engineering, the influence of aboveground insect infestation on Agrobacterium induced gall formation has not been investigated. Nicotiana benthamiana leaves were exposed to a sucking insect (whitefly) infestation and benzothiadiazole (BTH) for 7 d, and these exposed plants were inoculated with a tumorigenic Agrobacterium strain. We evaluated, both in planta and in vitro, how whitefly infestation affects crown gall disease. Whitefly-infested plants exhibited at least a two-fold reduction in gall formation on both stem and crown root. Silencing of isochorismate synthase 1 (ICS1), required for salicylic acid (SA) synthesis, compromised gall formation indicating an involvement of SA in whitefly-derived plant defence against Agrobacterium. Endogenous SA content was augmented in whitefly-infested plants upon Agrobacterium inoculation. In addition, SA concentration was three times higher in root exudates from whitefly-infested plants. As a consequence, Agrobacterium-mediated transformation of roots of whitefly-infested plants was clearly inhibited when compared to control plants. These results suggest that aboveground whitefly infestation elicits systemic defence responses throughout the plant. Our findings provide new insights into insect-mediated leaf-root intra-communication and a framework to understand interactions between three organisms: whitefly, N. benthamiana and Agrobacterium. © 2015 The Authors. New Phytologist © 2015 New Phytologist Trust.

Detection of the plant parasite Cuscuta reflexa by a tomato cell surface receptor.

Science.gov (United States)

Hegenauer, Volker; Fürst, Ursula; Kaiser, Bettina; Smoker, Matthew; Zipfel, Cyril; Felix, Georg; Stahl, Mark; Albert, Markus

2016-07-29

Parasitic plants are a constraint on agriculture worldwide. Cuscuta reflexa is a stem holoparasite that infests most dicotyledonous plants. One exception is tomato, which is resistant to C. reflexa We discovered that tomato responds to a small peptide factor occurring in Cuscuta spp. with immune responses typically activated after perception of microbe-associated molecular patterns. We identified the cell surface receptor-like protein CUSCUTA RECEPTOR 1 (CuRe1) as essential for the perception of this parasite-associated molecular pattern. CuRe1 is sufficient to confer responsiveness to the Cuscuta factor and increased resistance to parasitic C. reflexa when heterologously expressed in otherwise susceptible host plants. Our findings reveal that plants recognize parasitic plants in a manner similar to perception of microbial pathogens. Copyright © 2016, American Association for the Advancement of Science.

Weed infestation of onion in soil reduced cultivation system

Directory of Open Access Journals (Sweden)

Marzena Błażej-Woźniak

2013-12-01

Full Text Available Field experiment was conducted in the years 1998-2000 in GD Felin. The influence of no-tillage cultivation and conventional tillage with spring ploughing on weed infestation of onion was compared. In experiment four cover crop mulches (Sinapis alba L., Vicia sativa L., Phacelia tanacetifolia B., Avena sativa L. were applied. From annual weeds in weed infestation of onion in great number Matricaria chamomilla L., and Senecio vulgaris L. stepped out. and from perennial - Agropyron repens (L.P.B. Reduced soil cultivation system (no-tillage caused the significant growth of primary weed infestation of onion in comparison with conventional tillage. In all years of investigations the executed pre-sowing ploughing limited significantly the annual weeds' number in primary weed infestation. The applied mulches from cover plants limited in considerable degree the number of primary weed infestation. In all years of investigations the most weeds stepped out on control object. Among investigated cover crop mulches Vicia sativa L. and Avena sativa L. had a profitable effect on decrease of onion`s primary weed infestation. Soil cultivation system and cover crop mulches had no signi ficant residual influence on the secondary weed infestation of onion.

Detection of greenbug infestation on wheat using ground-based radiometry

Science.gov (United States)

Yang, Zhiming

Scope of methods of study. The purpose of this greenhouse study was to characterize stress in wheat caused by greenbugs using ground-based radiometry. Experiments were conducted to (a) identify spectral bands and vegetation indices sensitive to greenbug infestation; (b) differentiate stress caused due to greenbugs from water stress; (c) examine the impacts of plant growth stage on detection of greenbug infestation; and (d) compare infestations due to greenbug and Russian wheat aphid. Wheat (variety-TAM 107) was planted (seed spacing 1 in. x 3 in.) in plastic flats with dimension 24 in. x 16 in. x 8.75 in. Fifteen days after sowing, wheat seedlings were infested with greenbugs (biotype-E). Nadir measurement of canopy reflectance started the day after infestation and lasted until most infested plants were dead. Using a 16-band Cropscan radiometer, spectral reflectance data were collected daily (between 13:00--14:00 hours) and 128 vegetation indices were derived in addition to greenbug counts per tiller. Using SAS PROC MIXED, sensitivity of band and vegetation indices was identified based on Threshold Day. Subsequent to Threshold Day there was a consistent significant spectral difference between control and infested plants. Sensitivity of band and vegetation indices was further examined using correlation and relative sensitivity analyses. Findings and conclusions. Results show that it is possible to detect greenbug-induced stress on wheat using hand-held radiometers, such as Cropscan. Band 694 nm and the ratio-based vegetation index (RVI) derived from the band 694 nm and 800 nm were identified as most sensitive to greenbug infestation. Landsat TM bands and their derived vegetation indices also show potential for detecting wheat stress caused by greenbug infestation. Also, RVIs particularly derived using spectral band 694 nm and 800 nm were found useful in differentiating greenbug infestation from water stress. Furthermore, vegetation indices such as Normalized total

A novel growth-promoting microbe, Methylobacterium funariae sp. nov., isolated from the leaf surface of a common moss

Science.gov (United States)

Schauer, S

2011-01-01

Land plants (embryophytes) evolved in the presence of prokaryotic microbes. As a result, numerous mutually beneficial associations (symbioses) developed that can be analyzed using a variety of methods. Here we describe the isolation and characterization of a new pink-pigmented facultatively methylotrophic symbiotic bacterium of the genus Methylobacterium (laboratory strain F3.2) that was isolated from the gametophytic phylloids of the common cord moss Funaria hygrometrica Hedw. Plantlets were collected in the field and analyzed in the laboratory. Colonies of methylobacteria were obtained by the agar-impression-method. Based on its unique phenotype (the bacterial cells are characterized by fimbriae-like appendages), a comparative 16S rRNA gene (DNA) sequence analysis and an average DNA-DNA hybridization value of 8.4%, compared with its most closely related sister taxon, this isolate is described as a new species, Methylobacterium funariae sp. nov. (type strain F3.2). This new epiphytic bacterium inhabits the leaf surface of “primitive” land plants such as mosses and interacts with its host organism via the secretion of phytohormones (cytokinines, auxins). These external signals are perceived by the plant cells that divide and grow more rapidly than in the absence of their prokaryotic phytosymbionts. We suggest that M. funariae sp. nov. uses methanol emitted from the stomatal pores as principal carbon source for cell metabolism. However, our novel data indicate that, in this unique symbiotic plant-microbe interaction, the uptake of amino acids leached from the surface of the epidermal cells of the green host organism may be of importance as microbial carbon- and nitrogen-source. PMID:21673511

Flea (Pulex simulans) infestation in captive giant anteaters (Myrmecophaga tridactyla).

Science.gov (United States)

Mutlow, Adrian G; Dryden, Michael W; Payne, Patricia A

2006-09-01

A pair of captive adult giant anteaters (Myrmecophaga tridactyla) presented heavily infested with a flea species (Pulex simulans) commonly found on Virginia opossums (Didelphis virginiana) and raccoons (Procyon lotor) in the central United States. In this case, the flea was demonstrated to have completed its entire life cycle with the anteaters as the host. A single treatment of topical imidacloprid, coupled with removal and replacement of infested bedding, was rapidly effective at controlling the infestation and no adverse effects of the drug were noted. Control of the anteater infestation also removed the flea infestation of aardvarks in the same building.

Spatio-temporal distribution of the infestations of ...

African Journals Online (AJOL)

Spatial distribution of the infestations revealed experimental plots having recorded between 0 and 8 ... Infestations were also independent of abiotic factors (rainfall, temperature and ... chemical fight, by terrestrial way, air or systemic, ... the implementation of efficient fight plan strategy. ..... Influence of abiotic factors on the.

Sterilization of microbes by using various plasma jets

Energy Technology Data Exchange (ETDEWEB)

Uhm, Han S.; Choi, Eun H.; Cho, Guang S. [Kwangwoon University, Seoul (Korea, Republic of); Hong, Yong C. [National Fusion Research Institute, Daejeon (Korea, Republic of)

2012-03-15

Sterilization of various microbes was carried out by using several plasma jets. Argon plasma jets penetrate deep into ambient air and create a path for oxygen radicals to sterilize microbes including spores. A sterilization experiment with bacterial endospores indicates that an argon-oxygen plasma jet very effectively kills endospores of Bacillus atrophaeus (ATCC 9372), thereby demonstrating its capability to clean surfaces and its usefulness for reinstating contaminated equipment as free from toxic biological agents. The key element of the sterilization is oxygen radicals. The penciltype configuration produces a long, cold plasma jet capable of reaching 3.5 cm and having various excited plasma species shown through the optical emission spectrum. Operation of an air plasma jet at 2 W in a pencil-type electrode provides an excellent opportunity for sterilization of microbes. An electron microscope was used to observe the effects of the plasma on bacterial cell morphology. Transmission electron micrographs showed morphological changes in E. coli cells treated with an atmospheric plasma at 75 W for 2 min. The treated cells had severe cytoplasmic deformations and leakage of bacterial chromosome. The chromosomal DNA was either attached to the bacterial cells or released freely into the surrounding medium. The results clearly explain the loss of viability of bacterial cells after plasma treatment.

New Record of Rhinopoma microphyllum with the Invested Parasites and Microbes in the Developed Ecotourism Area of South Lombok Island NTB

Science.gov (United States)

Fajri, S. R.; NPrimawati, S.; Hadi, I.; Tresnani, G.

2018-01-01

Rhinopoma microphyllum is a bat species that lives in a habitat covered by grove of trees and shrubs in the primary forest vegetation. These species is included in the IUCN Red List list with Least Concern (LC) status or at the least information. This study was to describe of R. microphyllum as a new record in the southern of Lombok, and to examine the parasites and microbes that infest it. The study was carried out in the developed ecotourism area of southern Lombok Island of NTB during February-April 2017. A modified net and quadrant for cave ceiling was used to collect bat sample. Ectoparasite collection was done by combing the bat’s hair and the falling specimens were collected. The endoparasite examination was done by the flotation methods of intestinal contents, while microbial examination was done by collecting the microbes from oral cavity and feces. The results showed the discovery of R. microphyllum in two ecotourism development sites, The Buwun Cave and The Gale Gale Bangkang Cave Prabu Village, Central Lombok. The endoparasit examination found 4 species of endoparasit, 1 species of Coccidia sp, 2 species of Trematodes from Lecithodendridae Family (Prosthodendrium sp and Acanthatrium sp) and 1 unidentified Nematode specimen. The ectoparasite examination found only 1 species, Ischnopsyllus hexactenus (The long Eared Bat Flea), and the microbes found from oral cavity analysis are the Gram positive Coccus (Stphylococcus aureus) and faecal analysis are the Coccobacil Gram negative (Providensia penneri).

Ticks infesting bats (Mammalia: Chiroptera) in the Brazilian Pantanal.

Science.gov (United States)

Muñoz-Leal, Sebastián; Eriksson, Alan; Santos, Carolina Ferreira; Fischer, Erich; de Almeida, Juliana Cardoso; Luz, Hermes R; Labruna, Marcelo B

2016-05-01

Ticks associated with bats have been poorly documented in the Neotropical Zoogeographical Region. In this study, a total of 1028 bats were sampled for tick infestations in the southern portion of the Brazilian Pantanal. A total of 368 ticks, morphologically identified as Ornithodoros hasei (n = 364) and O. mimon (n = 4), were collected from the following bat species: Artibeus planirostris, Platyrrhinus lineatus, Phyllostomus hastatus, Mimon crenulatum and Noctilio albiventris. Morphological identification of O. hasei was confirmed by molecular analysis. Regarding the most abundant bat species, only 40 (6.2%) out of 650 A. planirostris were infested by O. hasei, with a mean intensity of 7.2 ticks per infested bat, or a mean abundance of 0.44 ticks per sampled bat. Noteworthy, one single P. hastatus was infested by 55 O. hasei larvae, in contrast to the 2.5-7.2 range of mean intensity values for the whole study. As a complement to the present study, a total of 8 museum bat specimens (6 Noctilio albiventris and 2 N. leporinus), collected in the northern region of Pantanal, were examined for tick infestations. These bats contained 176 ticks, which were all morphologically identified as O. hasei larvae. Mean intensity of infestation was 22, with a range of 1-46 ticks per infested bat. Our results suggest that A. planirostris might play an important role in the natural life cycle of O. hasei in the Pantanal.

Where the Wild Microbes Are: Education and Outreach on Sub-Seafloor Microbes

Science.gov (United States)

Cooper, S. K.; Kurtz, K.; Orcutt, B.; Strong, L.; Collins, J.; Feagan, A.

2014-12-01

Sub-seafloor microbiology has the power to spark the imaginations of children, students and the general public with its mysterious nature, cutting-edge research, and connections to the search for extraterrestrial life. These factors have been utilized to create a number of educational and outreach products to bring subsurface microbes to non-scientist audiences in creative and innovative ways. The Adopt a Microbe curriculum for middle school students provides hands-on activities and investigations for students to learn about microbes and the on-going research about them, and provides opportunities to connect with active expeditions. A new series of videos engages non-scientists with stories about research expeditions and the scientists themselves. A poster and associated activities explore the nature of science using a microbiologist and her research as examples. A new e-book for young children will engage them with age-appropriate text and illustrations. These projects are multidisciplinary, involve science and engineering practices, are available to all audiences and provide examples of high level and meaningful partnerships between scientists and educators and the kinds of products that can result. Subseafloor microbiology projects such as these, aimed at K-12 students and the general public, have the potential to entice the interest of the next generation of microbe scientists and increase general awareness of this important science.

The role of microbes in snowmelt and radiative forcing on an Alaskan icefield

Science.gov (United States)

Ganey, Gerard Q.; Loso, Michael G.; Burgess, Annie Bryant; Dial, Roman J.

2017-10-01

A lack of liquid water limits life on glaciers worldwide but specialized microbes still colonize these environments. These microbes reduce surface albedo, which, in turn, could lead to warming and enhanced glacier melt. Here we present results from a replicated, controlled field experiment to quantify the impact of microbes on snowmelt in red-snow communities. Addition of nitrogen-phosphorous-potassium fertilizer increased alga cell counts nearly fourfold, to levels similar to nitrogen-phosphorus-enriched lakes; water alone increased counts by half. The manipulated alga abundance explained a third of the observed variability in snowmelt. Using a normalized-difference spectral index we estimated alga abundance from satellite imagery and calculated microbial contribution to snowmelt on an icefield of 1,900 km2. The red-snow area extended over about 700 km2, and in this area we determined that microbial communities were responsible for 17% of the total snowmelt there. Our results support hypotheses that snow-dwelling microbes increase glacier melt directly in a bio-geophysical feedback by lowering albedo and indirectly by exposing low-albedo glacier ice. Radiative forcing due to perennial populations of microbes may match that of non-living particulates at high latitudes. Their contribution to climate warming is likely to grow with increased melt and nutrient input.

Strongyloides stercoralis infestation in HIV seropositive patients in ...

African Journals Online (AJOL)

Background: A contemporary surge in diarrhoeal illnesses due to parasitic infestations is believed to be a synergy between endemicity and HIV seropositivity. Aim: To determine the prevalence of Strongyloides stercoralis infestation among HIV seropositive patients at the University of Port Harcourt Teaching Hospital.

Influence of simultaneous infestations of Prostephanus truncatus ...

African Journals Online (AJOL)

The specific objective was to determine the number of the insect pests at F1 and F2 and the grain weight losses caused by the simultaneous pests\\' infestations of shelled maize in the search for a control strategy. The results showed a change in adult insect numbers from F1 to F2. During single infestation the change in P.

some nutritional aspects of haemonchosis in experimentally infested ...

African Journals Online (AJOL)

nutritional aberration has been described as anorexia in both pure (Evans, Blunt & Southcott, 1963) and mixed infestations where Haemonchus contortus was prominent. (Clark, Ortlepp, Bosman, Laurence, Groenewald & Quin,. 1951; Shumard et al. 1957). Further observations on nutritional aspects of a pure infestation of ...

Intestinal Worm Infestation and Anaemia in Pregnant Women

Directory of Open Access Journals (Sweden)

Krishna Bahadur Raut

2016-03-01

Conclusions: Aanaemia is prevalent in pregnant women of PHCRC, chapagaun and there was a significant correlation between anaemia and worm infestation. However, the relation among the haemoglobin level, iron, folic acid and albendazole was not significant. Keywords: anaemia; infestation; pregnant women; worm. | PubMed

Filthy lucre: A metagenomic pilot study of microbes found on circulating currency in New York City.

Directory of Open Access Journals (Sweden)

Julia M Maritz

Full Text Available Paper currency by its very nature is frequently transferred from one person to another and represents an important medium for human contact with-and potential exchange of-microbes. In this pilot study, we swabbed circulating $1 bills obtained from a New York City bank in February (Winter and June (Summer 2013 and used shotgun metagenomic sequencing to profile the communities found on their surface. Using basic culture conditions, we also tested whether viable microbes could be recovered from bills.Shotgun metagenomics identified eukaryotes as the most abundant sequences on money, followed by bacteria, viruses and archaea. Eukaryotic assemblages were dominated by human, other metazoan and fungal taxa. The currency investigated harbored a diverse microbial population that was dominated by human skin and oral commensals, including Propionibacterium acnes, Staphylococcus epidermidis and Micrococcus luteus. Other taxa detected not associated with humans included Lactococcus lactis and Streptococcus thermophilus, microbes typically associated with dairy production and fermentation. Culturing results indicated that viable microbes can be isolated from paper currency.We conducted the first metagenomic characterization of the surface of paper money in the United States, establishing a baseline for microbes found on $1 bills circulating in New York City. Our results suggest that money amalgamates DNA from sources inhabiting the human microbiome, food, and other environmental inputs, some of which can be recovered as viable organisms. These monetary communities may be maintained through contact with human skin, and DNA obtained from money may provide a record of human behavior and health. Understanding these microbial profiles is especially relevant to public health as money could potentially mediate interpersonal transfer of microbes.

A place for host-microbe symbiosis in the comparative physiologist's toolbox.

Science.gov (United States)

Kohl, Kevin D; Carey, Hannah V

2016-11-15

Although scientists have long appreciated that metazoans evolved in a microbial world, we are just beginning to appreciate the profound impact that host-associated microbes have on diverse aspects of animal biology. The enormous growth in our understanding of host-microbe symbioses is rapidly expanding the study of animal physiology, both technically and conceptually. Microbes associate functionally with various body surfaces of their hosts, although most reside in the gastrointestinal tract. Gut microbes convert dietary and host-derived substrates to metabolites such as short-chain fatty acids, thereby providing energy and nutrients to the host. Bacterial metabolites incorporated into the host metabolome can activate receptors on a variety of cell types and, in doing so, alter host physiology (including metabolism, organ function, biological rhythms, neural activity and behavior). Given that host-microbe interactions affect diverse aspects of host physiology, it is likely that they influence animal ecology and, if they confer fitness benefits, the evolutionary trajectory of a species. Multiple variables - including sampling regime, environmental parameters, host metadata and analytical methods - can influence experimental outcomes in host-microbiome studies, making careful experimental design and execution crucial to ensure reproducible and informative studies in the laboratory and field. Integration of microbiomes into comparative physiology and ecophysiological investigations can reveal the potential impacts of the microbiota on physiological responses to changing environments, and is likely to bring valuable insights to the study of host-microbiome interactions among a broad range of metazoans, including humans. © 2016. Published by The Company of Biologists Ltd.

Microbe Phobia and Kitchen Microbiology.

Science.gov (United States)

Williams, Robert P.; Gillen, Alan L.

1991-01-01

The authors present an exercise designed to help students overcome the misconception that most microbes make people sick. The activity helps students of all ages understand the important benefits of microbes such as in making bread, soy sauce, cheese, and wine. The role of microorganisms in processing cocoa and coffee and growing plants is also…

Prevalence of bovine trypanosomosis and assessment of trypanocidal drug resistance in tsetse infested and non-tsetse infested areas of Northwest Ethiopia

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Shimelis Dagnachew

2017-05-01

Full Text Available The Northwestern region of Ethiopia is affected by both tsetse and non-tsetse transmitted trypanosomosis with a significant impact on livestock productivity. The control of trypanosomosis in Ethiopia relies on either curative or prophylactic treatment of animals with diminazene aceturate (DA or isometamidium chloride (ISM. In the present work; questionnaire survey, cross-sectional and experimental studies were carried out to; a assess the utilization of trypanocidal drugs; b determine the prevalence of bovine trypanosomosis and; c assess the drug resistant problems respectively in Tsetse and non-tsetse infested areas on NW Ethiopia. A total of 100 respondents were included for the survey and the questionnaires focused on the drug utilization practices for the control of Trypanosomosis. Blood from cattle 640 (324 cattle tested in 2011, 316 cattle tested in 2012 and 795 (390 cattle tested in 2011, 405 cattle tested in 2012 were examined from tsetse infested and non-tsetse infested areas respectively using the buffy coat technique and thin blood smear for the detection of trypanosomes and measurement of packed cell volume (PCV. For the assessment of trypanocidal drug resistance three isolates, one from tsetse (TT and two from non-tsetse (NT areas were used on thirty six trypanosome naïve calves. The experimental animals were divided randomly into six groups of six animals (TT-ETBS2-DA, TT-ETBS2-ISM, NT-ETBD2-DA, NT-ETBD2-ISM, NT-ETBD3-DA and NT-ETBD3-ISM, which were infected with T. vivax isolated from a tsetse-infested or non-tsetse infested area with 2 × 106 trypanosomes from donor animals, and in each case treated with higher dose of DA or ISM. The results of the questionnaire survey showed trypanosomosis was a significant animal health constraint for 84% and 100% of the farmers questioned in non-tsetse and tsetse infested areas of Northwest Ethiopia respectively. Responses on trypanocidal drug utilization practices indicated that risk

Engineered microbes and methods for microbial oil production

Energy Technology Data Exchange (ETDEWEB)

Stephanopoulos, Gregory; Tai, Mitchell; Chakraborty, Sagar

2018-01-09

Some aspects of this invention provide engineered microbes for oil production. Methods for microbe engineering and for use of engineered microbes are also provided herein. In some embodiments, microbes are provided that are engineered to modulate a combination of rate-controlling steps of lipid synthesis, for example, a combination of a step generating metabolites, acetyl-CoA, ATP or NADPH for lipid synthesis (a push step), and a step sequestering a product or an intermediate of a lipid synthesis pathway that mediates feedback inhibition of lipid synthesis (a pull step). Such push-and-pull engineered microbes exhibit greatly enhanced conversion yields and TAG synthesis and storage properties.

Engineered microbes and methods for microbial oil production

Science.gov (United States)

Stephanopoulos, Gregory; Tai, Mitchell; Chakraborty, Sagar

2015-02-10

Some aspects of this invention provide engineered microbes for oil production. Methods for microbe engineering and for use of engineered microbes are also provided herein. In some embodiments, microbes are provided that are engineered to modulate a combination of rate-controlling steps of lipid synthesis, for example, a combination of a step generating metabolites, acetyl-CoA, ATP or NADPH for lipid synthesis (a push step), and a step sequestering a product or an intermediate of a lipid synthesis pathway that mediates feedback inhibition of lipid synthesis (a pull step). Such push-and-pull engineered microbes exhibit greatly enhanced conversion yields and TAG synthesis and storage properties.

Infestation of the banana root borer among different banana plant genotypes

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Fernando Teixeira de Oliveira

Full Text Available ABSTRACT: In this study, we aimed to investigate Cosmopolites sordidus (Coleoptera: Dryophthoridae infestation among different banana genotypes in a commercial banana orchard over the course of 30 months. Banana root borer infestation was compared in 20 banana genotypes, including five varieties and 15 hybrids. Overall, we observed that 94.17% of pest infestation cases occurred in the cortex region, and only 5.83% occurred in the central cylinder. Genotypes least sensitive to infestation were the Prata Anã (AAB and Pacovan (AAB varieties, where no damage was recorded. Among the hybrid genotypes, PV 9401 and BRS Fhia 18 showed intermediate levels of sensitivity, while BRS Tropical hybrids (AAAB, PA 9401 (AAAB, BRS Vitoria (AAAB, YB 4203 (AAAB, and Bucaneiro (AAAA were the most sensitive to attack by banana root borer. This study demonstrated that the infestation of the banana root borer varies according banana plant genotype, and the utilization of less susceptible genotypes could reduce infestation rates of C. sordidus.

EFFECTS OF INSECT PEST INFESTATION ON THE CAFFEINE ...

African Journals Online (AJOL)

The caffeine content of nuts of Cola nitida and C. acuminata infested by insect pests in four major geographical zones of Nigeria have been determined and compared with the uninfested ones using high-performance liquid chromatography (HPLC). The findings showed that the infestation has no significant effect on the ...

Investigating Microbe-Mineral Interactions: Recent Advances in X-Ray and Electron Microscopy and Redox-Sensitive Methods

Science.gov (United States)

Miot, Jennyfer; Benzerara, Karim; Kappler, Andreas

2014-05-01

Microbe-mineral interactions occur in diverse modern environments, from the deep sea and subsurface rocks to soils and surface aquatic environments. They may have played a central role in the geochemical cycling of major (e.g., C, Fe, Ca, Mn, S, P) and trace (e.g., Ni, Mo, As, Cr) elements over Earth's history. Such interactions include electron transfer at the microbe-mineral interface that left traces in the rock record. Geomicrobiology consists in studying interactions at these organic-mineral interfaces in modern samples and looking for traces of past microbe-mineral interactions recorded in ancient rocks. Specific tools are required to probe these interfaces and to understand the mechanisms of interaction between microbes and minerals from the scale of the biofilm to the nanometer scale. In this review, we focus on recent advances in electron microscopy, in particular in cryoelectron microscopy, and on a panel of electrochemical and synchrotron-based methods that have recently provided new understanding and imaging of the microbe-mineral interface, ultimately opening new fields to be explored.

The interactions between nanoscale zero-valent iron and microbes in the subsurface environment: A review

Energy Technology Data Exchange (ETDEWEB)

Xie, Yankai [College of Environmental Science and Engineering, Hunan University, Changsha, Hunan 410082 (China); Key Laboratory of Environmental Biology and Pollution Control (Hunan University), Ministry of Education, Changsha, Hunan 410082 (China); Dong, Haoran, E-mail: dongh@hnu.edu.cn [College of Environmental Science and Engineering, Hunan University, Changsha, Hunan 410082 (China); Key Laboratory of Environmental Biology and Pollution Control (Hunan University), Ministry of Education, Changsha, Hunan 410082 (China); Zeng, Guangming; Tang, Lin; Jiang, Zhao; Zhang, Cong; Deng, Junmin; Zhang, Lihua; Zhang, Yi [College of Environmental Science and Engineering, Hunan University, Changsha, Hunan 410082 (China); Key Laboratory of Environmental Biology and Pollution Control (Hunan University), Ministry of Education, Changsha, Hunan 410082 (China)

2017-01-05

Highlights: • The interactions between various microbes and NZVI were summarized. • The adverse and positive effects of NZVI on the growth of microbes were reviewed. • The synergistic effects of NZVI and bacteria on pollutant removal were reviewed. • The effects of iron-reducing bacteria on the aged NZVI were reviewed. • Future challenges to study the interactions between NZVI and microbes are suggested. - Abstract: Nanoscale zero-valent iron (NZVI) particles, applied for in-situ subsurface remediation, are inevitable to interact with various microbes in the remediation sites directly or indirectly. This review summarizes their interactions, including the effects of NZVI on microbial activity and growth, the synergistic effect of NZVI and microbes on the contaminant removal, and the effects of microbes on the aging of NZVI. NZVI could exert either inhibitive or stimulative effects on the growth of microbes. The mechanisms of NZVI cytotoxicity (i.e., the inhibitive effect) include physical damage and biochemical destruction. The stimulative effects of NZVI on certain bacteria are associated with the creation of appropriate living environment, either through providing electron donor (e.g., H{sub 2}) or carbon sources (e.g., the engineered organic surface modifiers), or through eliminating the noxious substances that can cause bactericidal consequence. As a result of the positive interaction, the combination of NZVI and some microbes shows synergistic effect on contaminant removal. Additionally, the aged NZVI can be utilized by some iron-reducing bacteria, resulting in the transformation of Fe(III) to Fe(II), which can further contribute to the contaminant reduction. However, the Fe(III)-reduction process can probably induce environmental risks, such as environmental methylation and remobilization of the previously entrapped heavy metals.

The interactions between nanoscale zero-valent iron and microbes in the subsurface environment: A review

International Nuclear Information System (INIS)

Xie, Yankai; Dong, Haoran; Zeng, Guangming; Tang, Lin; Jiang, Zhao; Zhang, Cong; Deng, Junmin; Zhang, Lihua; Zhang, Yi

2017-01-01

Highlights: • The interactions between various microbes and NZVI were summarized. • The adverse and positive effects of NZVI on the growth of microbes were reviewed. • The synergistic effects of NZVI and bacteria on pollutant removal were reviewed. • The effects of iron-reducing bacteria on the aged NZVI were reviewed. • Future challenges to study the interactions between NZVI and microbes are suggested. - Abstract: Nanoscale zero-valent iron (NZVI) particles, applied for in-situ subsurface remediation, are inevitable to interact with various microbes in the remediation sites directly or indirectly. This review summarizes their interactions, including the effects of NZVI on microbial activity and growth, the synergistic effect of NZVI and microbes on the contaminant removal, and the effects of microbes on the aging of NZVI. NZVI could exert either inhibitive or stimulative effects on the growth of microbes. The mechanisms of NZVI cytotoxicity (i.e., the inhibitive effect) include physical damage and biochemical destruction. The stimulative effects of NZVI on certain bacteria are associated with the creation of appropriate living environment, either through providing electron donor (e.g., H_2) or carbon sources (e.g., the engineered organic surface modifiers), or through eliminating the noxious substances that can cause bactericidal consequence. As a result of the positive interaction, the combination of NZVI and some microbes shows synergistic effect on contaminant removal. Additionally, the aged NZVI can be utilized by some iron-reducing bacteria, resulting in the transformation of Fe(III) to Fe(II), which can further contribute to the contaminant reduction. However, the Fe(III)-reduction process can probably induce environmental risks, such as environmental methylation and remobilization of the previously entrapped heavy metals.

A Community-Based Surveillance on Determinants of Rodent Infestation

Directory of Open Access Journals (Sweden)

Hsiu-Hua Pai

2003-01-01

Full Text Available Rodent infestation is an important factor in the transmission of infectious diseases of public health importance. From October to November 1998, surveillance stations were established in 110 boroughs of Kaohsiung City in southern Taiwan. Boroughs were chosen by random sampling 10 boroughs from each of 11 districts (464 boroughs in the city. The extent of rodent infestation was determined by cage trapping. The possibility of applying a community-based control program was evaluated by investigating associated demographic and environmental factors as well as related knowledge, attitudes, and behaviors. A total of 90 rodents were trapped in 41% of the 110 boroughs. Using univariate analyses, 17 factors were significantly associated with rodent infestation. A lack of knowledge that rodent control relies on community cooperation was the most important factor among the seven variables associated with the extent of rodent infestation (OR 3.1 by logistic multiple regression. This revealed the importance of community cooperation in controlling rodent infestation. Moreover, improvement of environmental hygiene associated with garbage problems, such as cleanliness of storage rooms and closets, and the hygiene of empty space and resource recycling stations should not be ignored.

Honey Bee Health: The Potential Role of Microbes

Science.gov (United States)

Microbes, are a diverse group of unicellular organisms that include bacteria, fungi, archaea, protists, and sometimes viruses. Bees carry a diverse assemblage of microbes (mostly bacteria and fungi). Very few are pathogenic; most microbes are likely commensal or even beneficial to the colony. Mic...

Principles of Plant-Microbe Interactions - Microbes for Sustainable Agriculture

Science.gov (United States)

Crops lack resistance to many soilborne pathogens and rely on antagonistic microbes recruited from the soil microbiome to protect their roots. Disease-suppressive soils, the best examples of microbial-based defense, are soils in which a pathogen does not establish or persist, establishes but causes ...

Evaluation of Blue Gum Chalid Infestation Woodlots in Western Kenya

International Nuclear Information System (INIS)

Otuoma, J.; Muchiri, M.N

2007-01-01

Blue gum chalcid (BGC) Leptocybe invasa is a gall-forming wasp that belongs to the insect order Hymenoptera, family Eulophidae. It attacks a wide range of Eucalyptus species mostly between the seedling stage and five years of age. BGC causes damage to eucalyptus by forming bump-shaped galls on the leaf midribs, petioles and stems.Twisted and knobbed leaves manifest severe infestation. The aim of this study was to establish the spatial distribution of BGC and extent of host plant damage in Eucalyptus woodlots in Western Kenya. The study was carried out in six permanent sampling plots in Eucalyptus woodlots in Busia, Bungoma, Kakamega and Nyando. Trees were assessed for crown damage by estimating and classifying the density of galls on the leaves into four levels of infestation: low (greater than 50% of foliage canopy with galls and no twisted or knobbed leaves), moderate (greater than 50% of foliage with galls and less than 50% of the leaves twisted and knobbed), high (greater than 50% of the leaves twisted and knobbed, galls on the twigs and some twigs deformed and severe (greater than 50% of the twigs deformed and regeneration foliage observed). An evaluation of the pests' infestation and the extent of host plant damage indicated that, 4% of the trees and severe infestation; 5% high; 20% moderate and 70% low. Approximately 1% of trees died as a result of loss of foliage attributable to severe infestation. Other observations from the study were that the severity of BGC infestation tended to decline as trees grew older and BGC infestation retarded tree growth

Different clinical allergological features of Taenia solium infestation.

Science.gov (United States)

Minciullo, Paola Lucia; Cascio, Antonio; Isola, Stefania; Gangemi, Sebastiano

2016-01-01

The tapeworm Taenia ( T. ) solium can be responsible for two different conditions: taeniasis and cysticercosis. Helminth infections in human host cause an immune response associated with elevated levels of IgE, tissue eosinophilia and mastocytosis, and with the presence of CD4+ T cells that preferentially produce IL-4, IL-5, and IL-13. Individuals exposed to helminth infections may have allergic inflammatory responses to parasites and parasite antigens. PubMed search of human cases of allergic reactions occurring during T. solium infestation was performed combining the terms (allergy, urticaria, angioedema, asthma, anaphylaxis) with T. solium . A study was considered eligible for inclusion in the review if it reported data on patients with T. solium infestation who had signs or symptoms of allergy. In literature we found six articles reporting the association between an allergic reaction and T. solium infestation: two cases of urticaria, two cases of relapsing angioedema, one case of asthma and two cases of anaphylaxis. Despite the large diffusion of T. solium infestation, we found only a few cases of concomitant allergic reaction and the presence of Taenia in the host. The association between T. solium infestation and allergic manifestations has never been clearly demonstrated, and in absence of a well-documented causality the hypotheses are merely speculative. Therefore, the association between Taenia infection and allergy needs to be thoroughly studied to better clarify if this association may really exist and which is the pathogenetic mechanism supported.

A comparative study on infestation of three varieties of maize ( Zea ...

African Journals Online (AJOL)

A study was carried out to study the infestation of three maize varieties (Maize suwan I–Y, Maize T2 USR – White single cross and Maize suwan 123) by Sitophilus zeamais Motsch. Infestation was assessed by counting the numbers of alive and dead adults and the number of infested and uninfested seeds. It was found out ...

Fluorogenic Cell-Based Biosensors for Monitoring Microbes

Science.gov (United States)

Curtis, Theresa; Salazar, Noe; Tabb, Joel; Chase, Chris

2010-01-01

Fluorogenic cell-based sensor systems for detecting microbes (especially pathogenic ones) and some toxins and allergens are undergoing development. These systems harness the natural signaltransduction and amplification cascades that occur in mast cells upon activation with antigens. These systems include (1) fluidic biochips for automated containment of samples, reagents, and wastes and (2) sensitive, compact fluorometers for monitoring the fluorescent responses of mast cells engineered to contain fluorescent dyes. It should be possible to observe responses within minutes of adding immune complexes. The systems have been shown to work when utilizing either immunoglobulin E (IgE) antibodies or traditionally generated rat antibodies - a promising result in that it indicates that the systems could be developed to detect many target microbes. Chimeric IgE antibodies and rat immunoglobulin G (IgG) antibodies could be genetically engineered for recognizing biological and chemical warfare agents and airborne and food-borne allergens. Genetic engineering efforts thus far have yielded (1) CD14 chimeric antibodies that recognize both Grampositive and Gram-negative bacteria and bind to the surfaces of mast cells, eliciting a degranulation response and (2) rat IgG2a antibodies that act similarly in response to low levels of canine parvovirus.

Population structure and growth of polydorid polychaetes that infest ...

African Journals Online (AJOL)

Polydorid polychaetes can infest cultured abalone thereby reducing productivity. In order to effectively control these pests, their reproductive biology must be understood. The population dynamics and reproduction of polydorids infesting abalone Haliotis midae from two farms in South Africa is described using a ...

Emerald ash borer infestation rates in Michigan, Ohio, and Indiana.

Science.gov (United States)

Eric L. Smith; Andrew J. Storer; Bryan K. Roosien

2009-01-01

The goal of this study was to obtain an estimate of the infestation rate of ash trees with emerald ash borer (EAB) (Agrilus planipennis, Fairmaire; Coleoptera; Buprestidae), across its primary infestation zone of...

Sarcoptic mange infestation in rabbits in an organized farm at Tamil Nadu.

Science.gov (United States)

Arul Prakash, M; Soundararajan, C; Nagarajan, K; Tensingh Gnanaraj, P; Ramesh Saravanakumar, V

2017-06-01

Sarcoptes scabiei are burrowing mites which causes major constraints in rabbit production. Eighty-eight rabbits were examined for mange infestation at University Research Farm, Tamil Nadu. Overall incidence of mange infestation in rabbit was 23.6 %. On microscopical examination, the mite was identified as Sacoptes scabiei var cuniculi. Among the breeds, Soviet Chinchilla were found to be infested more (57.14 %) followed by New Zealand White (28.57 %) and White Giant (28.57 %). Among the age groups, adults (33.33 %) were heavily infested than the grower (21.88 %) whereas, suckling had no infestation of mange. Among the sex, males (21.95 %) were heavily infested than the females (14.89 %). Lesions were mostly found on the edges of ear, nose, face and legs and characterized by loss of hair, thickening of the skin, irregular dried dirty encrusted scabs with erythema and disfigurement of face and ear.

Long-range transport of airborne microbes over the global tropical and subtropical ocean

KAUST Repository

Mayol, Eva; Arrieta, J M; Jimé nez, Maria A.; Martí nez-Asensio, Adriá n; Garcias Bonet, Neus; Dachs, Jordi; Gonzá lez-Gaya, Belé n; Royer, Sarah-J.; Bení tez-Barrios, Veró nica M.; Fraile-Nuez, Eugenio; Duarte, Carlos M.

2017-01-01

The atmosphere plays a fundamental role in the transport of microbes across the planet but it is often neglected as a microbial habitat. Although the ocean represents two thirds of the Earth's surface, there is little information on the atmospheric microbial load over the open ocean. Here we provide a global estimate of microbial loads and air-sea exchanges over the tropical and subtropical oceans based on the data collected along the Malaspina 2010 Circumnavigation Expedition. Total loads of airborne prokaryotes and eukaryotes were estimated at 2.2 × 1021 and 2.1 × 1021 cells, respectively. Overall 33-68% of these microorganisms could be traced to a marine origin, being transported thousands of kilometres before re-entering the ocean. Moreover, our results show a substantial load of terrestrial microbes transported over the oceans, with abundances declining exponentially with distance from land and indicate that islands may act as stepping stones facilitating the transoceanic transport of terrestrial microbes.The extent to which the ocean acts as a sink and source of airborne particles to the atmosphere is unresolved. Here, the authors report high microbial loads over the tropical Atlantic, Pacific and Indian oceans and propose islands as stepping stones for the transoceanic transport of terrestrial microbes..

Long-range transport of airborne microbes over the global tropical and subtropical ocean

KAUST Repository

Mayol, Eva

2017-07-28

The atmosphere plays a fundamental role in the transport of microbes across the planet but it is often neglected as a microbial habitat. Although the ocean represents two thirds of the Earth\\'s surface, there is little information on the atmospheric microbial load over the open ocean. Here we provide a global estimate of microbial loads and air-sea exchanges over the tropical and subtropical oceans based on the data collected along the Malaspina 2010 Circumnavigation Expedition. Total loads of airborne prokaryotes and eukaryotes were estimated at 2.2 × 1021 and 2.1 × 1021 cells, respectively. Overall 33-68% of these microorganisms could be traced to a marine origin, being transported thousands of kilometres before re-entering the ocean. Moreover, our results show a substantial load of terrestrial microbes transported over the oceans, with abundances declining exponentially with distance from land and indicate that islands may act as stepping stones facilitating the transoceanic transport of terrestrial microbes.The extent to which the ocean acts as a sink and source of airborne particles to the atmosphere is unresolved. Here, the authors report high microbial loads over the tropical Atlantic, Pacific and Indian oceans and propose islands as stepping stones for the transoceanic transport of terrestrial microbes..

Tick infestation on sheep, goat, horse and wild hare in Tamil Nadu.

Science.gov (United States)

Soundararajan, C; Nagarajan, K; Muthukrishnan, S; Arul Prakash, M

2018-03-01

The prevalence of tick infestation and their predilection sites on sheep, goat, horse and wild hare were studied at various places of Tamil Nadu, India. The prevalence of tick infestation in Madras red sheep, Tellicherry goat and horse was 77.11, 78.21 and 13.33%, respectively. Sheep were heavily infested with Haemaphysalis bispinosa followed by Hyalomma isaaci , Rhipicephalus haemaphysaloides and H . anatolicum . The ticks from goats were identified as H . bispinosa , R . haemaphysaloides , H . isaaci and R . sanguineus . Horses were infested with Otobus megnini and R . sanguineus . The ticks on wild hare ( Lepus nigricollis ) were identified as R . haemaphysaloides and H . bispinosa . Wild hare acts as a source of infestation to the sheep and goats since these animals shared the same field.

Field infestation of rambutan fruits by internal-feeding pests in Hawaii.

Science.gov (United States)

McQuate, G T; Follett, P A; Yoshimoto, J M

2000-06-01

More than 47,000 mature fruits of nine different varieties of rambutan (Nephelium lappaceum L.) were harvested from orchards in Hawaii to assess natural levels of infestation by tephritid fruit flies and other internal feeding pests. Additionally, harvested, mature fruits of seven different rambutan varieties were artificially infested with eggs or first-instars of Mediterranean fruit fly, Ceratitis capitata (Wiedemann), or oriental fruit fly, Bactrocera dorsalis (Hendel) (Diptera: Tephritidae) to assess host suitability. When all varieties were combined over two field seasons of sampling, fruit infestation rates were 0.021% for oriental fruit fly, 0.097% for Cryptophlebia spp. (Lepidoptera: Tortricidae), and 0.85% for pyralids (Lepidoptera). Species of Cryptophlebia included both C. illepida (Butler), the native Hawaiian species, and C. ombrodelta (Lower), an introduced species from Australia. Cryptophlebia spp. had not previously been known to attack rambutan. The pyralid infestation was mainly attributable to Cryptoblabes gnidiella (Milliere), a species also not previously recorded on rambutan in Hawaii. Overall infestation rate for other moths in the families Blastobasidae, Gracillariidae, Tineidae, and Tortricidae was 0.061%. In artificially infested fruits, both species of fruit fly showed moderately high survivorship for all varieties tested. Because rambutan has such low rates of infestation by oriental fruit fly and Cryptophlebia spp., the two primary internal-feeding regulatory pests of rambutan in Hawaii, it may be amenable to the alternative treatment efficacy approach to postharvest quarantine treatment.

Roles and Importance of Microbes in the Radioactive Waste Disposal

International Nuclear Information System (INIS)

Baik, Min Hoon; Lee, Seung Yeop; Roh, Yeol

2009-01-01

Recently the importance and interest for the microbes has been increased because several important results for the effects of microbes on the radioactive waste disposal have been published continuously. In this study, research status and major results on the various roles and effects of microbes in the radioactive waste disposal have been investigated. We investigated and summarized the roles and major results of microbes in a multi-barrier system consisting of an engineered barrier and a natural barrier which is considered in radioactive waste disposal systems. For the engineered barrier, we discussed about the effects of microbes on the corrosion of a waste container and investigated the survival possibility and roles of microbes in a compacted bentonite buffer. For the natural barrier, the roles of microbes present in groundwaters and rocks were discussed and summarized with major results from natural analogue studies. Furthermore, we investigated and summarized the roles and various interactions processes of microbes and their effects on the radionuclide migration and retardation including recent research status. Therefore, it is expected that the effects and roles of microbes on the radioactive waste disposal can be rigorously evaluated if further researches are carried out for a long-term behavior of the disposal system in the deep geological environments and for the effects of microbes on the radionuclide migration through geological media.

Microbes safely, effectively bioremediate oil field pits

International Nuclear Information System (INIS)

Shaw, B.; Block, C.S.; Mills, C.H.

1995-01-01

Natural and augmented bioremediation provides a safe, environmental, fast, and effective solution for removing hydrocarbon stains from soil. In 1992, Amoco sponsored a study with six bioremediation companies, which evaluated 14 different techniques. From this study, Amoco continued using Environmental Protection Co.'s (EPC) microbes for bioremediating more than 145 sites near Farmington, NM. EPC's microbes proved effective on various types of hydrocarbon molecules found in petroleum stained soils from heavy crude and paraffin to volatiles such as BTEX (benzene, toluene, ethylbenzene, xylene) compounds. Controlled laboratory tests have shown that these microbes can digest the hydrocarbon molecules with or without free oxygen present. It is believed that this adaptation gives these microbes their resilience. The paper describes the bioremediation process, environmental advantages, in situ and ex situ bioremediation, goals of bioremediation, temperature effects, time, cost, and example sites that were treated

Molecular detection of protozoan parasites in ticks infesting cattle ...

African Journals Online (AJOL)

An assessment of protozoan parasite load in the ticks infesting cattle entering the country by hooves through a major trans-boundary route in Ogun State was carried out using ... This is the first report on protozoan parasites detected in ticks infesting cattle entering Nigeria through a major trans-boundary route in Nigeria.

Chemical signaling involved in plant-microbe interactions.

Science.gov (United States)

Chagas, Fernanda Oliveira; Pessotti, Rita de Cassia; Caraballo-Rodríguez, Andrés Mauricio; Pupo, Mônica Tallarico

2018-03-05

Microorganisms are found everywhere, and they are closely associated with plants. Because the establishment of any plant-microbe association involves chemical communication, understanding crosstalk processes is fundamental to defining the type of relationship. Although several metabolites from plants and microbes have been fully characterized, their roles in the chemical interplay between these partners are not well understood in most cases, and they require further investigation. In this review, we describe different plant-microbe associations from colonization to microbial establishment processes in plants along with future prospects, including agricultural benefits.

Infestation caused by acanthocephala

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Daniele Crotti

2009-03-01

Full Text Available An on-line case of infestation caused by M. moniliformis is descripted. This rodents’ worm, belonging to acanthocephala, can be rarely responsible of human intestinal pathology. The case is the pretext for a brief revision on this parasitosis. So, biological, epidemiological, clinical and diagnostical findings are reported.

Coercion in the Evolution of Plant-Microbe Communication: A Perspective.

Science.gov (United States)

Rowe, S L; Norman, J S; Friesen, M L

2018-06-06

Plants and microbes are dependent on chemical signals as a means of interkingdom communication. There are two predicted paths for the evolution of these signals. Ritualization is the oft-assumed pathway for the evolution of plant-microbe communication systems. In this process, chemical signals, which benefit both receiver and sender, evolve from chemical cues, which benefit only the receiver. However, plant-microbe signaling may evolve from coercive interactions as well, a process known as sensory manipulation. Here, we aim to highlight the prevalence of coercive interactions and discuss sensory manipulation in the context of plant-microbe interactions. We present two examples of stabilized coercion: microbial coercion of plants via the release of phytohormones and plant coercion of microbes via manipulation of quorum-sensing compounds. Furthermore, we provide an evolutionary framework for the emergence of signaling from coercive plant-microbe interactions through the process of sensory manipulation. We hope that researchers will recognize the relevance of coercive interactions in plant-microbe systems and consider sensory manipulation as a plausible evolutionary trajectory for the emergence of plant-microbe signaling.

Parasite infestation increases on coral reefs without cleaner fish

Science.gov (United States)

Grutter, A. S.; De Brauwer, M.; Bshary, R.; Cheney, K. L.; Cribb, T. H.; Madin, E. M. P.; McClure, E. C.; Meekan, M. G.; Sun, D.; Warner, R. R.; Werminghausen, J.; Sikkel, P. C.

2018-03-01

Mutualisms are pivotal in shaping ecological communities. Iconic images of cleaner fish entering the mouths of predatory fish clients to remove ectoparasites epitomize their mutual benefit. Experimental manipulations of cleaner wrasse reveal declines in fish size and growth, and population abundance and diversity of client fishes in the absence of cleaner wrasse. Fishes grow more slowly and are less abundant and diverse on reefs without cleaner wrasse, both for larger species that are regularly cleaned and have high ectoparasite loads ("attractive species"), and for those smaller species that are rarely cleaned and are rarely infested with parasites ("unattractive species"). We therefore considered whether these previously observed declines in individual and population parameters on reefs without cleaners were related to increased ectoparasite infestation using an attractive species ( Hemigymnus melapterus, Labridae) and an unattractive species ( Pomacentrus amboinensis, Pomacentridae). Traps with these fish as a form of bait were deployed to sample blood-sucking gnathiid ectoparasites (Gnathiidae: Isopoda) on reefs from which cleaners ( Labroides dimidiatus, Labridae) have been removed for 13 yr. Cleaner fish could not enter traps to access the clients/hosts, but gnathiids could enter the traps to infest hosts; thus, this method sampled the indirect effect of cleaners on gnathiid infestation of fish. Infestation was higher on reefs without cleaners than on those with them. The effect was only detected during the daytime when cleaners are active and only on the attractive species ( H. melapterus). Thus, cleaner presence indirectly reduced fish exposure to parasites in a species that is highly susceptible to parasites, but not in one that is rarely infested with parasites. This suggests that cleaner presence indirectly reduces exposure of a common fish species to harmful parasites, which may explain some observed benefits in fishes at this location.

Increased gum arabic production after infestation of Acacia senegal ...

African Journals Online (AJOL)

Jane

2011-07-20

Jul 20, 2011 ... chemical properties of gum were determined for infested and control trees. A. senegal infested by A. ... also in the textile, pottery, lithography, cosmetics and ... Deforestation within the gum belt has lead to an increase in desert .... Atomic Absorption = V*N EDTA*1000/Volume of extract (mg/l). Where, V is the ...

Intestinal parasitic infestations in children living in Warsaw

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Krzysztof Korzeniewski

2016-06-01

Full Text Available Background. Intestinal parasitic infestations pose one of the biggest health problems of the contemporary world. Objectives. The aim of this article was to present the prevalence of intestinal parasites among children living in a large urban agglomeration. Material and methods . 1823 children (916 girls and 907 boys, aged 3–6, attending 31 different pre-schools in Warsaw, were examined in 2014. Stool specimens were tested in the Department of Epidemiology and Tropical Medicine of the Military Institute of Medicine by light microscopy using three different diagnostic methods (direct smear in Lugol’s solution, decantation with distilled water, Fülleborn’s flotation. The material for testing, fixed in 10% formalin, was collected three times at 2–3-day intervals. Results . Parasitological examination of the stool specimens showed intestinal parasitic infestations in 47 children (2.57% of the study group. Only 7 children were infested with pathogenic parasites (6 cases of giardiasis and 1 enterobiasis and required antiparasitic treatment. 17 children were infested with potentially pathogenic protozoa (Blasocystis sp. and 26 with non-pathogenic protozoa ( Entamoeba coli , Endolimax nanai , but because of lack of gastrointestinal symptoms (asymptomatic carriage they did not require a treatment. Conclusions . Performed examination show low infection rates among children from a large urban agglomeration. In the absence of epidemiological surveillance over the prevalence of the majority of intestinal parasitic diseases in Poland, and because some diagnostic centres generate positive test results using valueless methods, the propagation of parasitological diagnostics in light microscopy in direction of prevalence of intestinal parasitic infestations, especially among patients with gastrointestinal symptoms, is strongly recommended.

Intestinal helminth infestation is associated with increased bronchial responsiveness in children.

Science.gov (United States)

da Silva, Emerson R; Sly, Peter D; de Pereira, Marilyn U; Pinto, Leonardo A; Jones, Marcus H; Pitrez, Paulo M; Stein, Renato T

2008-07-01

Non-atopic asthma is the predominant phenotype in non-affluent parts of Latin America. We recently reported that infestation with Ascaris lumbricoides increased the risk of non-atopic asthma in less affluent areas of Brazil but the mechanism is unclear. The present study was conducted to determine whether helminth infestation is associated with heightened bronchial responsiveness (BHR), a common finding in asthma. A random sample of 50 asthmatic and 50 non-asthmatic controls (mean age 10.1 years) were selected from a larger cohort (n = 1,011) without knowledge of their helminth infestation status. Three stool samples were collected from each child on different days and each sample was analyzed by the Kato-Katz method for quantitative determination of helminth eggs. Bronchial provocation tests were performed with inhaled 4.5% hypertonic saline using the ISAAC Phase II standardized protocol. There was no difference between the prevalence of positive BHR in the asthmatics (20.4%) compared with the controls (14.6%) (P = 1.0). Helminth infestation was detected in 24.0% of children, with A. lumbricoides being the most common. Children with high load infestation (>or=100 eggs/g) were five times more likely to have BHR than children with low load or no infestation. Despite the small sample size the results of the present study suggest that the link between high load helminth infestation and non-atopic asthma may be mediated via heightened bronchial responsiveness, possibly due to an inflammatory response to the pulmonary phase of the helminth life cycle.

MicrobeWorld Radio and Communications Initiative

Energy Technology Data Exchange (ETDEWEB)

Barbara Hyde

2006-11-22

MicrobeWorld is a 90-second feature broadcast daily on more than 90 public radio stations and available from several sources as a podcast, including www.microbeworld.org. The feature has a strong focus on the use and adapatbility of microbes as alternative sources of energy, in bioremediation, their role in climate, and especially the many benefits and scientific advances that have resulting from decoding microbial genomes. These audio features are permanantly archived on an educational outreach site, microbeworld.org, where they are linked to the National Science Education Standards. They are also being used by instructors at all levels to introduce students to the multiple roles and potential of microbes, including a pilot curriculum program for middle-school students in New York.

Simulated microbe removal around finger rings using different hand sanitation methods.

Science.gov (United States)

Alur, Archana A; Rane, Madhavi J; Scheetz, James P; Lorenz, Douglas J; Gettleman, Lawrence

2009-09-01

It is our opinion that the CDC and the WHO have underestimated cross-contamination under examination gloves in dental clinics while wearing jewelry, such as finger rings. These agencies only "recommend" removing jewelry, and only washing hands for 15 seconds with soap and warm water before donning gloves. This study examined several washing procedures and finger rings using simulated microbes. A gloved rubber hand manikin was made and fitted with a fresh disposable vinyl glove. Four fingers were fitted with rings or no ring, dusted with simulated microbes, and washed with a scrub brush for 5, 15, and 25 seconds under 20 degrees C and 40 degrees C water alone, or with liquid hand soap. Light levels (in lux) of fluorescent powder before and after washing were measured and delta scores calculated for changes in light levels, equivalent to effectiveness of hand washing procedures. A full-factorial, 3-factor analysis of variance (ANOVA) was used to test for differences among levels of the three study factors-time, temperature, and soap use. Tukey's post hoc honestly significant difference (HSD) test was applied to significant factors to examine pair-wise differences between factor levels. It was found that the longer the hands with rings were washed with a scrub brush under flowing water, the more simulated microbes were removed. By 25 seconds, all methods were essentially the same. Simulated microbes were more difficult to remove from the palm compared to the back of the hand. The liquid hand soap used in this study was more effective with warm water than cold. When given a choice of washing with cold water up to 15 seconds, it would be preferable not to use soap to remove simulated microbes. Qualitatively, the outer surface of finger rings were more effectively cleaned than the crevice below the ring, and the ring with a stone setting appeared to accumulate and retain simulated microbes more than other rings. The most effective treatment was washing with warm water

Host-microbe and microbe-microbe interactions in the evolution of obligate plant parasitism.

Science.gov (United States)

Kemen, Ariane C; Agler, Matthew T; Kemen, Eric

2015-06-01

Research on obligate biotrophic plant parasites, which reproduce only on living hosts, has revealed a broad diversity of filamentous microbes that have independently acquired complex morphological structures, such as haustoria. Genome studies have also demonstrated a concerted loss of genes for metabolism and lytic enzymes, and gain of diversity of genes coding for effectors involved in host defense suppression. So far, these traits converge in all known obligate biotrophic parasites, but unexpected genome plasticity remains. This plasticity is manifested as transposable element (TE)-driven increases in genome size, observed to be associated with the diversification of virulence genes under selection pressure. Genome expansion could result from the governing of the pathogen response to ecological selection pressures, such as host or nutrient availability, or to microbial interactions, such as competition, hyperparasitism and beneficial cooperations. Expansion is balanced by alternating sexual and asexual cycles, as well as selfing and outcrossing, which operate to control transposon activity in populations. In turn, the prevalence of these balancing mechanisms seems to be correlated with external biotic factors, suggesting a complex, interconnected evolutionary network in host-pathogen-microbe interactions. Therefore, the next phase of obligate biotrophic pathogen research will need to uncover how this network, including multitrophic interactions, shapes the evolution and diversity of pathogens. © 2015 The Authors. New Phytologist © 2015 New Phytologist Trust.

Bark-beetle infestation affects water quality in the Rocky Mountains of Colorado

Science.gov (United States)

Mikkelson, K.; Dickenson, E.; Maxwell, R. M.; McCray, J. E.; Sharp, J. O.

2012-12-01

In the previous decade, millions of acres in the Rocky Mountains of Colorado have been infested by the mountain pine beetle (MPB) leading to large-scale tree mortality. These vegetation changes can impact hydrological and biogeochemical processes, possibly altering the leaching of natural organic matter to surrounding waters and increasing the potential for harmful disinfection byproducts (DBP) during water treatments. To investigate these adverse outcomes, we have collected water quality data sets from local water treatment facilities in the Rocky Mountains of Colorado that have either been infested with MPB or remain a control. Results demonstrate significantly more total organic carbon (TOC) and DBPs in water treatment facilities receiving their source water from infested watersheds as compared to the control sites. Temporal DBP concentrations in MPB-watersheds also have increased significantly in conjunction with the bark-beetle infestation. Interestingly, only modest increases in TOC concentrations were observed in infested watersheds despite more pronounced increases in DBP concentrations. Total trihalomethanes, a heavily regulated DBP, was found to approach the regulatory limit in two out of four reporting quarters at facilities receiving their water from infested forests. These findings indicate that bark-beetle infestation alters TOC composition and loading in impacted watersheds and that this large-scale phenomenon has implications on the municipal water supply in the region.

Infestation Level Influences Oviposition Site Selection in the Tomato Leafminer Tuta absoluta (Lepidoptera: Gelechiidae

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Thomas Bawin

2014-11-01

Full Text Available The tomato leafminer, Tuta absoluta (Lepidoptera: Gelechiidae, is a devastating pest that develops principally on solanaceous plants throughout South and Central America and Europe. In this study, we tested the influence of three levels of T. absoluta infestations on the attraction and oviposition preference of adult T. absoluta. Three infestation levels (i.e., non-infested plants, plants infested with 10 T. absoluta larvae, and plants infested with 20 T. absoluta larvae were presented by pairs in a flying tunnel to groups of T. absoluta adults. We found no differences in terms of adult attraction for either level of infestations. However, female oviposition choice is influenced by larvae density on tomato plants. We discuss the underlying mechanisms and propose recommendations for further research.

Surface-attached cells, biofilms and biocide susceptibility: implications for hospital cleaning and disinfection.

Science.gov (United States)

Otter, J A; Vickery, K; Walker, J T; deLancey Pulcini, E; Stoodley, P; Goldenberg, S D; Salkeld, J A G; Chewins, J; Yezli, S; Edgeworth, J D

2015-01-01

Microbes tend to attach to available surfaces and readily form biofilms, which is problematic in healthcare settings. Biofilms are traditionally associated with wet or damp surfaces such as indwelling medical devices and tubing on medical equipment. However, microbes can survive for extended periods in a desiccated state on dry hospital surfaces, and biofilms have recently been discovered on dry hospital surfaces. Microbes attached to surfaces and in biofilms are less susceptible to biocides, antibiotics and physical stress. Thus, surface attachment and/or biofilm formation may explain how vegetative bacteria can survive on surfaces for weeks to months (or more), interfere with attempts to recover microbes through environmental sampling, and provide a mixed bacterial population for the horizontal transfer of resistance genes. The capacity of existing detergent formulations and disinfectants to disrupt biofilms may have an important and previously unrecognized role in determining their effectiveness in the field, which should be reflected in testing standards. There is a need for further research to elucidate the nature and physiology of microbes on dry hospital surfaces, specifically the prevalence and composition of biofilms. This will inform new approaches to hospital cleaning and disinfection, including novel surfaces that reduce microbial attachment and improve microbial detachment, and methods to augment the activity of biocides against surface-attached microbes such as bacteriophages and antimicrobial peptides. Future strategies to address environmental contamination on hospital surfaces should consider the presence of microbes attached to surfaces, including biofilms. Copyright © 2014 The Healthcare Infection Society. Published by Elsevier Ltd. All rights reserved.

Textiles and Microbes

Science.gov (United States)

Freney, Jean; Renaud, François N. R.

Microbes can be carried by and even multiply on textiles. The first real, premeditated, microbiological warfare happened in 1763, during the Anglo-French wars in North America, when Native American emissaries were given blankets or handkerchiefs contaminated with smallpox. Thus, a small epidemic started and spread rapidly, causing considerable damage to the rank and file of the Native Americans. Nowadays, it could be said that textiles could be vectors of infections in hospitals or communities. The making of antimicrobial textiles could prevent them from becoming a reservoir of microbes in the transmission of infections and in cases of voluntary contamination in a terrorist threat for example. However, methods have to show that textiles are really active and do not attack the cutaneous flora they are in contact with. In this chapter, the role of textiles in the transmission of infections is summarized and the main characteristics of antimicrobial textiles are described.

Evolutionary adaptation in three-way interactions between plants, microbes and arthropods

OpenAIRE

Biere, A.; Tack, A.J.M.

2013-01-01

Evolutionary adaptations in interactions between plants, microbes and arthropods are generally studied in interactions that involve only two of these groups, that is, plants and microbes, plants and arthropods or arthropods and microbes. We review the accumulating evidence from a wide variety of systems, including plant- and arthropod-associated microbes, and symbionts as well as antagonists, that selection and adaptation in seemingly two-way interactions between plants and microbes, plants a...

Mountain pine beetle infestations in relation to lodgepole pine diameters

Science.gov (United States)

Walter E. Cole; Gene D. Amman

1969-01-01

Tree losses resulting from infestation by the mountain pine beetle (Dendroctonus ponderosae Hopkins) were measured in two stands of lodgepole pine (Pinus contorta Dougl.) where the beetle population had previously been epidemic. Measurement data showed that larger diameter trees were infested and killed first. Tree losses...

Cases of bed bug (Cimex lectularius infestations in Northwest Italy

Directory of Open Access Journals (Sweden)

Federica Giorda

2013-12-01

Full Text Available Bed bugs (Cimex lectularius have been a common problem for humans for at least 3,500 years and in Europe their presence was endemic until the end of World War II, when infestations began to decrease. However, since the beginning of the 21st century new cases of infestations have been reported in developed countries. Many theories have been put forward to explain this change of direction, but none has been scientifically proven. The aim of this study is to provide some reports of bed bug infestations in Northern Italy (Liguria, Piedmont and Aosta valley regions and a brief summary about their identification, clinical significance, bioecology and control. From 2008 to date, 17 bed bug infestations were identified in Northwest Italy. Knowledge about the presence and distribution of bed bugs in Italy is scanty, prior to this work only 2 studies reported the comeback of these arthropods in the Italian territory; further investigations would be necessary to better understand the current situation.

Studies on pest infestation of commercial samples of cowpeas and ...

African Journals Online (AJOL)

Weight loss in both the infested beans and maize increased with increase in the number of emergence holes. Public health implications of the insect infestation of the stored products such as reduction in nutritive value and accumulation of undesirable residues were discussed. Improved storage and pest control techniques ...

Examination of the pest status of corn-infesting Ulidiidae (Diptera).

Science.gov (United States)

Goyal, Gaurav; Nuessly, Gregg S; Seal, Dakshina R; Steck, Gary J; Capinera, John L; Meagher, Robert L

2012-10-01

Larvae of 11 species of picture-winged flies (Diptera: Ulididae) are known to feed on corn plants (Zea mays L.) in the western hemisphere. Larvae emerge from eggs deposited in leaf axils and corn silk to feed mostly within ears, but the primary versus secondary nature (i.e., pest status) of their infestation is not known for all of these species. Choice and no-choice tests by using a split-plot design were conducted in greenhouse and field trials to determine the pest status on sweet corn of three of these species found in Florida: Chaetopsis massyla (Walker), Euxesta eluta Loew, and E. stigmatias Loew. The main treatments (uninfested ears and ears experimentally infested with either Spodoptera frugiperda [Lepidoptera: Noctuidae] or E. eluta larvae) were applied at first silk. The subtreatments (C. massyla, E. eluta, or E. stigmatias adults caged on ears) were applied 7 d later and maintained for 10 d. All three fly species were reared from uninfested and experimentally infested ears in both choice and no-choice tests in greenhouse and field trials confirming both primary and secondary modes of ear infestation. More flies of all three species emerged from ears that were preinfested with S. frugiperda compared with uninfested ears suggesting either preference for or greater survival within ears previously infested by S. frugiperda. Fewer E. eluta and E. stigmatias emerged from ears preinfested with E. eluta in no-choice field tests, suggesting that previous infestation by this fly may negatively affect oviposition or that older fly larvae affect survival of neonate larvae. All three species studied here should be considered primary pests that can render unprotected sweet corn ears unmarketable.

Neural correlates of delusional infestation responding to aripiprazole monotherapy: a case report

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Ponson L

2015-02-01

Full Text Available Laura Ponson,1,2 Frédéric Andersson,1 Wissam El-Hage1,2 1Université François-Rabelais de Tours, Inserm, Imagerie et Cerveau UMR U930, Tours, France, 2CHRU de Tours, Clinique Psychiatrique Universitaire, Tours, France Background: The pathophysiology and appropriate pharmacological interventions for delusional infestation remain unknown.Case presentation: Here, we report a case of primary delusional infestation successfully treated with aripiprazole. We performed functional magnetic resonance imaging (fMRI to investigate brain structures and functional modifications. Before antipsychotic treatment, pre- versus post-treatment fMRI images revealed a marked increase in brain activation in the supplementary motor area (SMA.Conclusion: Our results highlight the efficacy and safety of aripiprazole in the treatment of delusional infestation and the possible role of SMA dysfunction in delusional infestation. Indeed, our results suggest that psychiatric improvement of delusional infestation is associated with normalization of brain activity, particularly in the SMA. Keywords: supplementary motor area, antipsychotics, fMRI

Sphingomonads in Microbe-Assisted Phytoremediation: Tackling Soil Pollution.

Science.gov (United States)

Gatheru Waigi, Michael; Sun, Kai; Gao, Yanzheng

2017-09-01

Soil pollution has become a major concern in various terrestrial ecosystems worldwide. One in situ soil bioremediation strategy that has gained popularity recently is microbe-assisted phytoremediation, which is promising for remediating pollutants. Sphingomonads, a versatile bacteria group comprising four well-known genera, are ubiquitous in vegetation grown in contaminated soils. These Gram-negative microbes have been investigated for their ability to induce innate plant growth-promoting (PGP) traits, including the formation of phytohormones, siderophores, and chelators, in addition to their evolutionary adaptations enabling biodegradation and microbe-assisted removal of contaminants. However, their capacity for bacterial-assisted phytoremediation has to date been undervalued. Here, we highlight the specific features, roles, advantages, and challenges associated with using sphingomonads in plant-microbe interactions, from the perspective of future phytotechnologies. Copyright © 2017 Elsevier Ltd. All rights reserved.

MVP: a microbe-phage interaction database.

Science.gov (United States)

Gao, Na L; Zhang, Chengwei; Zhang, Zhanbing; Hu, Songnian; Lercher, Martin J; Zhao, Xing-Ming; Bork, Peer; Liu, Zhi; Chen, Wei-Hua

2018-01-04

Phages invade microbes, accomplish host lysis and are of vital importance in shaping the community structure of environmental microbiota. More importantly, most phages have very specific hosts; they are thus ideal tools to manipulate environmental microbiota at species-resolution. The main purpose of MVP (Microbe Versus Phage) is to provide a comprehensive catalog of phage-microbe interactions and assist users to select phage(s) that can target (and potentially to manipulate) specific microbes of interest. We first collected 50 782 viral sequences from various sources and clustered them into 33 097 unique viral clusters based on sequence similarity. We then identified 26 572 interactions between 18 608 viral clusters and 9245 prokaryotes (i.e. bacteria and archaea); we established these interactions based on 30 321 evidence entries that we collected from published datasets, public databases and re-analysis of genomic and metagenomic sequences. Based on these interactions, we calculated the host range for each of the phage clusters and accordingly grouped them into subgroups such as 'species-', 'genus-' and 'family-' specific phage clusters. MVP is equipped with a modern, responsive and intuitive interface, and is freely available at: http://mvp.medgenius.info. © The Author(s) 2017. Published by Oxford University Press on behalf of Nucleic Acids Research.

Seasonal infestation of donkeys by lice: phenology, risk factors and management.

Science.gov (United States)

Ellse, L; Burden, F A; Wall, R

2014-07-14

A longitudinal study was undertaken over a 21 months period to examine the seasonal abundance of lice infesting donkeys, the risk factors which predispose donkeys to infestation and the effectiveness of louse management. All the lice seen were Bovicola (Werneckiella) ocellatus. A strong seasonal pattern, which was correlated with mean monthly temperature, was observed with higher prevalence and intensity in the cooler, winter months (October-March). Overall infestation in these animals was over-dispersed, suggesting that some individuals are strongly predisposed to infestation. Donkey age and mean hair length were characteristics which affected louse prevalence: older and younger donkeys and donkeys with longer hair harboured the highest numbers of lice. However, the practice of coat-clipping, to reduce the infestation, resulted in a lower louse prevalence only in the summer, suggesting that clipping is not an effective form of louse control in cooler months. Higher louse burdens were associated with larger areas of visible excoriation and hair damage, suggesting that B. ocellatus does adversely impact animal welfare. However, the ability of animal carers to estimate louse presence or absence accurately on an individual donkey was not sufficiently high to allow targeted selective treatment of heavily infested animals to be employed effectively. As animals are housed in closed herds these findings suggest that clipping in the summer and treating all animals with insecticide in late autumn, prior to turn-in may be an effective louse management strategy. Copyright © 2014 Elsevier B.V. All rights reserved.

Soil Microbes and soil microbial proteins: interactions with clay minerals

International Nuclear Information System (INIS)

Spence, A.; Kelleher, B. P.

2009-01-01

Bacterial enumeration in soil environments estimates that the population may reach approximately 10 1 0 g - 1 of soil and comprise up to 90% of the total soil microbial biomass. Bacteria are present in soils as single cells or multicell colonies and often strongly adsorb onto mineral surfaces such as sand and clay. The interactions of microbes and microbial biomolecules with these minerals have profound impacts on the physical, chemical and biological properties of soils. (Author)

Circulating oxidative stress caused by Psoroptes natalensis infestation in Indian water buffaloes.

Science.gov (United States)

Mahajan, Sumit; Panigrahi, Padma Nibash; Dey, Sahadeb; Dan, Ananya; Kumar, Akhilesh; Mahendran, K; Maurya, P S

2017-09-01

The present study reports the circulating oxidative stress associated with Psoroptes natalensis infestation in Indian water buffaloes. Three non-descriptive water buffaloes, age ranging between 4 and 9 years, presented to Referral Veterinary Polyclinic, IVRI, for treatment served as clinical subject. The infested animals were treated with Ivermectin subcutaneously and Amitraz topically along with antioxidant like ascorbic acid, Vitamin E and selenium. The level of lipid peroxidase was significantly higher (3.94 ± 0.34) in Psoroptes infested buffalo and was reduced significantly ( P  ≤ 0.05) after treatment (1.56 ± 0.40). The significantly higher levels of MDA before treatment signify the role of lipid peroxide mediated skin lesions in P. natalensis infested buffaloes. Similarly the activities of the body antioxidant like GSH and CAT were significantly higher ( P  ≤ 0.05) after treatment. The less level of the body antioxidant (GSH) and reduced activities of the antioxidant enzymes like CAT and SOD before treatment imply that Psoroptes mite-infested buffaloes were in a state of significant oxidative stress. The study provides information on oxidative stress indices in P. natalensis infested buffaloes and gives additional insight regarding the pathogenesis of the disease and its management.

Stored product mites (Acari: Astigmata) infesting food in various types of packaging.

Science.gov (United States)

Hubert, Jan; Nesvorna, Marta; Volek, Vlado

2015-02-01

From 2008 to 2014, stored product mites have been reported from prepackaged dried food on the market in the Czech Republic. The infestation was by Carpoglyphus lactis (L.) in dried fruits and Tyrophagus putrescentiae (Schrank) in dog feed. The infestation is presumably caused by poor protection of the packages. We compared various packaging methods for their resistance to mites using dried apricots and dog feed in laboratory experiments. The trial packages included nine different plastic films, monofilm, duplex and triplex, and one type of plastic cup (ten replicates per packaging type). All packaging materials are available on the Czech market for dried food products. The samples of dried food were professionally packed in a factory and packaged dried apricots were exposed to C. lactis and dog food to T. putrescentiae. After 3 months of exposure, the infestation and mite density of the prepackaged food was assessed. Mites were found to infest six types of packages. Of the packaging types with mites, 1-5 samples were infested and the maximum abundance was 1,900 mites g(-1) of dried food. Mites entered the prepackaged food by faulty sealing. Inadequate sealing is suggested to be the major cause of the emerged infestation of dried food.

A Two Years Study of Ticks infesting Goats and Sheep in Abha, Saudi Arabia

International Nuclear Information System (INIS)

AlKhalifa, Mohamed S.; Khalil, Galila M.; Diab, Fathi M.

2007-01-01

The weather in Abha was characterized by a temperature of 11.7-23.7 degree C, a relative humidity 0f 40-92% and rainfall of 0.2-275mm during a study period of 1990 and 1991. More ticks infested the goats in 1990 than in 1991 while more ticks infested sheep in 1991 than in 1990. The tick species collected monthly from 10 goats during these years were, respectively, Rhipicephalus turanicus (95.1 and 67.1%), Haemaphysalis sulcata (4.0 and 25.8%), Hyalomma anatolicum anatolicum (0.2 and 1.0%) and H. impeltatum (0.7 and 6.1%). Goat infestation rate with R. turanicus was 60-100% in 1990 with peaks in January, April, July, November and December when 90-100% of the goats were infested with 6.3-8.3 ticks/goat. In 1991, goat infestation rate was 10-100% with peaks in April, July and December when all goats were infested with 5.6-9.0 ticks/goat, with a sex ratio of 0.40:1-2.00:1 in both years, respectively. The ticks collected monthly from 10 sheep during these years were, respectively, R. turanicus (89.2 and 86.2%), Haem. sulcata (5.7 and 4.9%), H. a. anatolicum (1.2 and 1.0%), H. a. excavatum (0.7 and 1.2%), H. dromedarii (0.9 and 0.4%), H. marginatum rufipes (1.4 and 4.1%), H. m. turanicum (0.0 and 1.2%) and H. impeltatum (0.9 and 1.0%). Sheep infestation rate with R. turanicus was 30-100% in both years with a peak in June in 1990 when all sheep were infested with 13.8 ticks/sheep and 2 peaks in April and June in 1991 when all sheep were infested with 25.0-29.6 ticks/sheep, with a sex ratio of 0.2:1-2.6:1 and 0.6:1-4.5:1 in these years, respectively. The change in R. turanicus infestation in goats and sheep was not correlated with temperature, relative humidity or rainfall during both years except for the infestation in sheep in 1991, which was positively correlated with rainfall. With the exception of R. turanicus and Haem. sulcata, the other tick species infest primarily animals other than sheep and goats. It is recommended that control measures be directed toward the

The microbe-free plant: fact or artefact?

Directory of Open Access Journals (Sweden)

Laila P. Pamela Partida-Martinez

2011-12-01

Full Text Available Plant-microbe interactions are ubiquitous. Plants are often colonized by pathogens but even more commonly engaged in neutral or mutualistic interactions with microbes: below-ground microbial plant associates are mycorrhizal fungi, Rhizobia and rhizosphere bacteria, above-ground plant parts are colonized by bacterial and fungal endophytes and by microbes in the phyllosphere. We emphasize here that a completely microbe-free plant is an exotic exception rather than the biologically relevant rule. The complex interplay of such microbial communities with the host plant affects plant nutrition, growth rate, resistance to biotic and abiotic stress, and plant survival and distribution. The mechanisms involved reach from nutrient acquisition, the production of plant hormones or direct antibiosis to effects on host resistance genes or interactions at higher trophic levels. Plant-associated microbes are heterotrophic and cause costs to their host plant, whereas the benefits depend on the environment. Thus, the outcome of the interaction is highly context-dependent. Considering the microbe-free plant as the ‘normal’ or control stage significantly impairs research into important phenomena such as (1 phenotypic and epigenetic plasticity, (2 the ‘normal’ ecological outcome of a given interaction and (3 the evolution of plants. For the future, we suggest cultivation-independent screening methods using direct PCR from plant tissue of more than one fungal and bacterial gene to collect data on the true microbial diversity in wild plants. The patterns found could be correlated to host species and environmental conditions, in order to formulate testable hypotheses on the biological roles of plant endophytes in nature. Experimental approaches should compare different host-endophyte combinations under various environmental conditions and study at the genetic, transcriptional and physiological level the parameters that shift the interaction along the mutualism

Irradiation of Microbes from Spent Nuclear Fuel Storage Pool Environments

International Nuclear Information System (INIS)

Breckenridge, C.R.; Watkins, C.S.; Bruhn, D.F.; Roberto, F.F.; Tsang, M.N.; Pinhero, P.J.; Brey, R.F.; Wright, R.N.; Windes, W.F.

1999-01-01

Microbes have been isolated and identified from spent nuclear fuel storage pools at the Idaho National Engineering and Environmental Laboratory (INEEL). Included among these are Corynebacterium aquaticum, Pseudomonas putida, Comamonas acidovorans, Gluconobacter cerinus, Micrococcus diversus, Rhodococcus rhodochrous, and two strains of sulfate-reducing bacteria (SRB). We examined the sensitivity of these microbes to a variety of total exposures of radiation generated by a 6-MeV linear accelerator (LINAC). The advantage of using a LINAC is that it provides a relatively quick screen of radiation tolerance. In the first set of experiments, we exposed each of the aforementioned microbes along with four additional microbes, pseudomonas aeruginosa, Micrococcus luteus, Escherchia coli, and Deinococcus radiodurans to exposures of 5 x 10 3 and 6 x 10 4 rad. All microbial specimens withstood the lower exposure with little or no reduction in cell population. Upon exposing the microbes to the larger dose of 6 x 10 4 rad, we observed two distinct groupings: microbes that demonstrate resistance to radiation, and microbes that display intolerance through a dramatic reduction from their initial population. Microbes in the radiation tolerant grouping were exposed to 1.1 x 10 5 rad to examine the extent of their resistance. We observe a correlation between radiation resistance and gram stain. The gram-positive species we examined seem to demonstrate a greater radiation resistance

Irradiation of Microbes from Spent Nuclear Fuel Storage Pool Environments

Energy Technology Data Exchange (ETDEWEB)

Breckenridge, C.R.; Watkins, C.S.; Bruhn, D.F.; Roberto, F.F.; Tsang, M.N.; Pinhero, P.J. [INEEL (US); Brey, R.F. [ISU (US); Wright, R.N.; Windes, W.F.

1999-09-03

Microbes have been isolated and identified from spent nuclear fuel storage pools at the Idaho National Engineering and Environmental Laboratory (INEEL). Included among these are Corynebacterium aquaticum, Pseudomonas putida, Comamonas acidovorans, Gluconobacter cerinus, Micrococcus diversus, Rhodococcus rhodochrous, and two strains of sulfate-reducing bacteria (SRB). We examined the sensitivity of these microbes to a variety of total exposures of radiation generated by a 6-MeV linear accelerator (LINAC). The advantage of using a LINAC is that it provides a relatively quick screen of radiation tolerance. In the first set of experiments, we exposed each of the aforementioned microbes along with four additional microbes, pseudomonas aeruginosa, Micrococcus luteus, Escherchia coli, and Deinococcus radiodurans to exposures of 5 x 10{sup 3} and 6 x 10{sup 4} rad. All microbial specimens withstood the lower exposure with little or no reduction in cell population. Upon exposing the microbes to the larger dose of 6 x 10{sup 4} rad, we observed two distinct groupings: microbes that demonstrate resistance to radiation, and microbes that display intolerance through a dramatic reduction from their initial population. Microbes in the radiation tolerant grouping were exposed to 1.1 x 10{sup 5} rad to examine the extent of their resistance. We observe a correlation between radiation resistance and gram stain. The gram-positive species we examined seem to demonstrate a greater radiation resistance.

Dipylidium caninum infection in dogs infested with fleas.

Science.gov (United States)

Wani, Z A; Allaie, I M; Shah, B M; Raies, A; Athar, H; Junaid, S

2015-03-01

The present study pertains to the Dipylidium caninum infection in dogs infested with fleas. Twenty dogs were presented to the Divison of Surgery, SKUAST-K for different surgical procedures. Majority of the dogs had a history of pruritus, loss of weight as well as rubbing their perineal region against the wall. On external examination dogs were found infested with Ctenocephalides canis. When dogs were anesthetized, motile segments were seen coming out of their anus, which were then identified as mature segments of D. caninum.

Food microbe tracker: a web-based tool for storage and comparison of food-associated microbes.

Science.gov (United States)

Vangay, Pajau; Fugett, Eric B; Sun, Qi; Wiedmann, Martin

2013-02-01

Large amounts of molecular subtyping information are generated by the private sector, academia, and government agencies. However, use of subtype data is limited by a lack of effective data storage and sharing mechanisms that allow comparison of subtype data from multiple sources. Currently available subtype databases are generally limited in scope to a few data types (e.g., MLST. net) or are not publicly available (e.g., PulseNet). We describe the development and initial implementation of Food Microbe Tracker, a public Web-based database that allows archiving and exchange of a variety of molecular subtype data that can be cross-referenced with isolate source data, genetic data, and phenotypic characteristics. Data can be queried with a variety of search criteria, including DNA sequences and banding pattern data (e.g., ribotype or pulsed-field gel electrophoresis type). Food Microbe Tracker allows the deposition of data on any bacterial genus and species, bacteriophages, and other viruses. The bacterial genera and species that currently have the most entries in this database are Listeria monocytogenes, Salmonella, Streptococcus spp., Pseudomonas spp., Bacillus spp., and Paenibacillus spp., with over 40,000 isolates. The combination of pathogen and spoilage microorganism data in the database will facilitate source tracking and outbreak detection, improve discovery of emerging subtypes, and increase our understanding of transmission and ecology of these microbes. Continued addition of subtyping, genetic or phenotypic data for a variety of microbial species will broaden the database and facilitate large-scale studies on the diversity of food-associated microbes.

The microbes we eat: abundance and taxonomy of microbes consumed in a day's worth of meals for three diet types.

Science.gov (United States)

Lang, Jenna M; Eisen, Jonathan A; Zivkovic, Angela M

2014-01-01

Far more attention has been paid to the microbes in our feces than the microbes in our food. Research efforts dedicated to the microbes that we eat have historically been focused on a fairly narrow range of species, namely those which cause disease and those which are thought to confer some "probiotic" health benefit. Little is known about the effects of ingested microbial communities that are present in typical American diets, and even the basic questions of which microbes, how many of them, and how much they vary from diet to diet and meal to meal, have not been answered. We characterized the microbiota of three different dietary patterns in order to estimate: the average total amount of daily microbes ingested via food and beverages, and their composition in three daily meal plans representing three different dietary patterns. The three dietary patterns analyzed were: (1) the Average American (AMERICAN): focused on convenience foods, (2) USDA recommended (USDA): emphasizing fruits and vegetables, lean meat, dairy, and whole grains, and (3) Vegan (VEGAN): excluding all animal products. Meals were prepared in a home kitchen or purchased at restaurants and blended, followed by microbial analysis including aerobic, anaerobic, yeast and mold plate counts as well as 16S rRNA PCR survey analysis. Based on plate counts, the USDA meal plan had the highest total amount of microbes at 1.3 × 10(9) CFU per day, followed by the VEGAN meal plan and the AMERICAN meal plan at 6 × 10(6) and 1.4 × 10(6) CFU per day respectively. There was no significant difference in diversity among the three dietary patterns. Individual meals clustered based on taxonomic composition independent of dietary pattern. For example, meals that were abundant in Lactic Acid Bacteria were from all three dietary patterns. Some taxonomic groups were correlated with the nutritional content of the meals. Predictive metagenome analysis using PICRUSt indicated differences in some functional KEGG categories

Recent Research Status on the Microbes in the Radioactive Waste Disposal and Identification of Aerobic Microbes in a Groundwater Sampled from the KAERI Underground Research Tunnel(KURT)

International Nuclear Information System (INIS)

Baik, Min Hoon; Lee, Seung Yeop; Cho, Won Jin

2006-11-01

In this report, a comprehensive review on the research results and status for the various effects of microbes in the radioactive waste disposal including definition and classification of microbes, and researches related with the waste containers, engineered barriers, natural barriers, natural analogue studies, and radionuclide migration and retardation. Cultivation, isolation, and classification of aerobic microbes found in a groundwater sampled from the KAERI Underground Research Tunnel (KURT) located in the KAERI site have carried out and over 20 microbes were found to be present in the groundwater. Microbial identification by a 16S rDNA genetic analysis of the selected major 10 aerobic microbes was performed and the identified microbes were characterized

Potential impact of global climate change on benthic deep-sea microbes.

Science.gov (United States)

Danovaro, Roberto; Corinaldesi, Cinzia; Dell'Anno, Antonio; Rastelli, Eugenio

2017-12-15

Benthic deep-sea environments are the largest ecosystem on Earth, covering ∼65% of the Earth surface. Microbes inhabiting this huge biome at all water depths represent the most abundant biological components and a relevant portion of the biomass of the biosphere, and play a crucial role in global biogeochemical cycles. Increasing evidence suggests that global climate changes are affecting also deep-sea ecosystems, both directly (causing shifts in bottom-water temperature, oxygen concentration and pH) and indirectly (through changes in surface oceans' productivity and in the consequent export of organic matter to the seafloor). However, the responses of the benthic deep-sea biota to such shifts remain largely unknown. This applies particularly to deep-sea microbes, which include bacteria, archaea, microeukaryotes and their viruses. Understanding the potential impacts of global change on the benthic deep-sea microbial assemblages and the consequences on the functioning of the ocean interior is a priority to better forecast the potential consequences at global scale. Here we explore the potential changes in the benthic deep-sea microbiology expected in the coming decades using case studies on specific systems used as test models. © FEMS 2017. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

EFFECT OF REPEATED INFESTATION OF CHRYSOMYIA BEZZIANA ON WEIGHT OF ITS LARVAE

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S. Baidya

2016-12-01

Full Text Available There are about 20 species of obligate and 50 species of facultative myiasis producing flies found in India. Out of these, the Old World screwworm fly Chrysomyia bezziana is the most important obligate myiasis-causing fly. Three repeated infestations at an interval of one month each, larvae of C. bezziana developed in the clinically abraded wounds in cattle. Average weights of the larvae during the 1st, 2nd and 3rd infestation were 62.18+0.441, 56.53+0.389 and 56.45+0.485 mg, respectively. Statistical analysis revealed significant (P<0.05 reduction in larval weight during the 2nd and 3rd infestations compared to the larval weight of the initial infestation.

Mineral content of insect infested stored legumes treated with edible oils.

Science.gov (United States)

Modgil, R

2000-12-01

Mineral content of three insect (pulse beetle, Callosobruchus chinensis L.) infested legumes viz. chick pea, mung pea and pigeon pea stored for six months and treated with three edible oils viz. groundnut, mustard and coconut oil has been studied. With increase in storage period significant increase in calcium, phosphorus and iron content of untreated legumes was observed. After three months of storage slight increase in three minerals was observed in the legumes treated with coconut oil which continued till the end of sixth months as compared to other two oil treated counterparts. The storage period was associated with insect infestation which in turn influenced the mineral content of legumes. Ground nut and mustard oils were able to protect legumes for six months against insect infestation when applied in small amounts (0.5%). Whereas coconut oil had protective effect against insect infestation for four months only.

High exposure to Tunga penetrans (Linnaeus, 1758 correlates with intensity of infestation

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Hermann Feldmeier

2006-02-01

Full Text Available Tungiasis is a parasitic skin disease widespread in resource-poor urban and rural communities in Brazil. Inhabitants of an urban slum in Northeast Brazil were examined for the presence of tungiasis lesions and followed-up twice a week for a period of three weeks. Each time the number, stages, and topographic localization of lesions were recorded on a documentation sheet. The infestation rate (number of newly embedded sand fleas per individual and day remained stable during the observation period. The infestation rate was significantly related to the intensity of infestation (total number of lesions present (rho = 0.70, p < 0.0001 and the proportion of viable lesions (rho = 0.28, p < 0.0001. The results indicate that in an endemic area the infestation intensity and the proportion of viable lesions can be used as a proxy to assess the exposure of individuals at risk for tungiasis. Persistently high infestation rates during the transmission season favour the use of prevention measures against invading sand fleas (such as a repellent rather than a drug to kill already embedded parasites.

Extracellular vesicles modulate host-microbe responses by altering TLR2 activity and phagocytosis.

Directory of Open Access Journals (Sweden)

Jeroen van Bergenhenegouwen

Full Text Available Oral delivery of Gram positive bacteria, often derived from the genera Lactobacillus or Bifidobacterium, can modulate immune function. Although the exact mechanisms remain unclear, immunomodulatory effects may be elicited through the direct interaction of these bacteria with the intestinal epithelium or resident dendritic cell (DC populations. We analyzed the immune activation properties of Lactobacilli and Bifidobacterium species and made the surprising observation that cellular responses in vitro were differentially influenced by the presence of serum, specifically the extracellular vesicle (EV fraction. In contrast to the tested Lactobacilli species, tested Bifidobacterium species induce TLR2/6 activity which is inhibited by the presence of EVs. Using specific TLR ligands, EVs were found to enhance cellular TLR2/1 and TLR4 responses while TLR2/6 responses were suppressed. No effect could be observed on cellular TLR5 responses. We determined that EVs play a role in bacterial aggregation, suggesting that EVs interact with bacterial surfaces. EVs were found to slightly enhance DC phagocytosis of Bifidobacterium breve whereas phagocytosis of Lactobacillus rhamnosus was virtually absent upon serum EV depletion. DC uptake of a non-microbial substance (dextran was not affected by the different serum fractions suggesting that EVs do not interfere with DC phagocytic capacity but rather modify the DC-microbe interaction. Depending on the microbe, combined effects of EVs on TLR activity and phagocytosis result in a differential proinflammatory DC cytokine release. Overall, these data suggest that EVs play a yet unrecognized role in host-microbe responses, not by interfering in recipient cellular responses but via attachment to, or scavenging of, microbe-associated molecular patterns. EVs can be found in any tissue or bodily fluid, therefore insights into EV-microbe interactions are important in understanding the mechanism of action of potential

Efficacy of herbicide seed treatments for controlling Striga infestation of Sorghum

NARCIS (Netherlands)

Tuinstra, M.R.; Soumana, S.; Al-Khatib, K.; Kapran, I.; Toure, A.; Ast, van A.; Bastiaans, L.; Ochanda, N.W.; Salami, I.; Kayentao, M.; Dembele, S.

2009-01-01

Witchweed (Striga spp.) infestations are the greatest obstacle to sorghum [Sorghum bicolor (L.) Moench] grain production in many areas in Africa. The objective of this study was to evaluate the efficacy of herbicide seed treatments for controlling Striga infestation of sorghum. Seeds of an

A new species, of Aceria neopaederiae (Acari: Eriophyidae), infesting Paederia foetida L. (Rubiaceae) in Thailand, Hong Kong and Singapore

Science.gov (United States)

Aceria paederiae (Nalepa) infesting leaves of Paederia foetida L. (Family Rubiaceae) in Thailand, Hong Kong and Singapore is reported for the first time. The mite induces small, round galls on both leaf surfaces. The complete descriptions of both males and females, including line drawings and SEM ...

9 CFR 72.12 - Cattle; exposure to tick infestation after treatment or inspection prohibited.

Science.gov (United States)

2010-01-01

... 9 Animals and Animal Products 1 2010-01-01 2010-01-01 false Cattle; exposure to tick infestation... (INCLUDING POULTRY) AND ANIMAL PRODUCTS TEXAS (SPLENETIC) FEVER IN CATTLE § 72.12 Cattle; exposure to tick infestation after treatment or inspection prohibited. The cattle shall not be exposed to tick infestation...

Influence of household rat infestation on leptospira transmission in the urban slum environment.

Science.gov (United States)

Costa, Federico; Ribeiro, Guilherme S; Felzemburgh, Ridalva D M; Santos, Norlan; Reis, Renato Barbosa; Santos, Andreia C; Fraga, Deborah Bittencourt Mothe; Araujo, Wildo N; Santana, Carlos; Childs, James E; Reis, Mitermayer G; Ko, Albert I

2014-12-01

The Norway rat (Rattus norvegicus) is the principal reservoir for leptospirosis in many urban settings. Few studies have identified markers for rat infestation in slum environments while none have evaluated the association between household rat infestation and Leptospira infection in humans or the use of infestation markers as a predictive model to stratify risk for leptospirosis. We enrolled a cohort of 2,003 urban slum residents from Salvador, Brazil in 2004, and followed the cohort during four annual serosurveys to identify serologic evidence for Leptospira infection. In 2007, we performed rodent infestation and environmental surveys of 80 case households, in which resided at least one individual with Leptospira infection, and 109 control households. In the case-control study, signs of rodent infestation were identified in 78% and 42% of the households, respectively. Regression modeling identified the presence of R. norvegicus feces (OR, 4.95; 95% CI, 2.13-11.47), rodent burrows (2.80; 1.06-7.36), access to water (2.79; 1.28-6.09), and un-plastered walls (2.71; 1.21-6.04) as independent risk factors associated with Leptospira infection in a household. We developed a predictive model for infection, based on assigning scores to each of the rodent infestation risk factors. Receiver operating characteristic curve analysis found that the prediction score produced a good/excellent fit based on an area under the curve of 0.78 (0.71-0.84). Our study found that a high proportion of slum households were infested with R. norvegicus and that rat infestation was significantly associated with the risk of Leptospira infection, indicating that high level transmission occurs among slum households. We developed an easily applicable prediction score based on rat infestation markers, which identified households with highest infection risk. The use of the prediction score in community-based screening may therefore be an effective risk stratification strategy for targeting control

Biofuels: from microbes to molecules

National Research Council Canada - National Science Library

Lu, Xuefeng

2014-01-01

.... The production of different biofuel molecules including hydrogen, methane, ethanol, butanol, higher chain alcohols, isoprenoids and fatty acid derivatives, from genetically engineered microbes...

ECTOPARASITES INFESTING LIVESTOCK IN THREE LOCAL ...

African Journals Online (AJOL)

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they may also transmit pathogens, thereby acting as vectors of diseases (Parola et al., ... transmit pathogens that causes some human diseases such as lyme diseases ... annulatus (14.6%), Hyloma trucatus (4.7%) infesting dogs in. Wurukum ...

Production of mycotoxins on artificially and naturally infested building materials

DEFF Research Database (Denmark)

Nielsen, Kristian Fog; Gravesen, S.; Nielsen, P.A.

1999-01-01

, especially Asp. ustus and Asp. niger produced many unknown secondary metabolites on the building materials. Analyses of wallpaper and glass-fibre wallpaper naturally infested with Asp. versicolor revealed sterigmatocystin and 5-methoxysterigmatocystin. Analyses of naturally infested wallpaper showed that C......In this study, the ability to produce mycotoxins during growth on artificially infested building materials was investigated for Penicillium chrysogenum, Pen. polonicum, Pen. brevicompactum, Chaetomium spp., Aspergillus ustus, Asp. niger, Ulocladium spp., Alternaria spp., and Paecilomyces spp., all...... isolated from water-damaged building materials. Spores from the different isolates of the above mentioned species were inoculated on gypsum board with and without wallpaper and on chipboard with and without wallpaper. Fungal material was scraped off the materials, extracted, and analyzed using high...

The microbes we eat: abundance and taxonomy of microbes consumed in a day’s worth of meals for three diet types

Directory of Open Access Journals (Sweden)

Jenna M. Lang

2014-12-01

Full Text Available Far more attention has been paid to the microbes in our feces than the microbes in our food. Research efforts dedicated to the microbes that we eat have historically been focused on a fairly narrow range of species, namely those which cause disease and those which are thought to confer some “probiotic” health benefit. Little is known about the effects of ingested microbial communities that are present in typical American diets, and even the basic questions of which microbes, how many of them, and how much they vary from diet to diet and meal to meal, have not been answered.We characterized the microbiota of three different dietary patterns in order to estimate: the average total amount of daily microbes ingested via food and beverages, and their composition in three daily meal plans representing three different dietary patterns. The three dietary patterns analyzed were: (1 the Average American (AMERICAN: focused on convenience foods, (2 USDA recommended (USDA: emphasizing fruits and vegetables, lean meat, dairy, and whole grains, and (3 Vegan (VEGAN: excluding all animal products. Meals were prepared in a home kitchen or purchased at restaurants and blended, followed by microbial analysis including aerobic, anaerobic, yeast and mold plate counts as well as 16S rRNA PCR survey analysis.Based on plate counts, the USDA meal plan had the highest total amount of microbes at 1.3 × 109 CFU per day, followed by the VEGAN meal plan and the AMERICAN meal plan at 6 × 106 and 1.4 × 106 CFU per day respectively. There was no significant difference in diversity among the three dietary patterns. Individual meals clustered based on taxonomic composition independent of dietary pattern. For example, meals that were abundant in Lactic Acid Bacteria were from all three dietary patterns. Some taxonomic groups were correlated with the nutritional content of the meals. Predictive metagenome analysis using PICRUSt indicated differences in some functional KEGG

Application of slightly acidic electrolyzed water for inactivating microbes in a layer breeding house.

Science.gov (United States)

Hao, X X; Li, B M; Wang, C Y; Zhang, Q; Cao, W

2013-10-01

Lots of microorganisms exist in layer houses can cause bird diseases and worker health concerns. Spraying chemical disinfectants is an effective way to decontaminate pathogenic microorganisms in the air and on surfaces in poultry houses. Slightly acidic electrolyzed water (SAEW, pH 5.0-6.5) is an ideal, environmentally friendly broad-spectrum disinfectant to prevent and control bacterial or viral infection in layer farms. The purpose of this work was to investigate the cleaning effectiveness of SAEW for inactivating the microbes in layer houses. The effect of SAEW was evaluated by solid materials and surface disinfection in a hen house. Results indicate that SAEW with an available chlorine concentration of 250 mg/L, pH value of 6.19, and oxygen reduction potential of 974 mV inactivated 100% of bacteria and fungi in solid materials (dusts, feces, feather, and feed), which is more efficient than common chemical disinfectant such as benzalkonium chloride solution (1:1,000 vol/vol) and povidone-iodine solution (1:1,000 vol/vol). Also, it significantly reduced the microbes on the equipment or facility surfaces (P < 0.05), including floor, wall, feed trough, and water pipe surfaces. Moreover, SAEW effectively decreased the survival rates of Salmonella and Escherichia coli by 21 and 16 percentage points. In addition, spraying the target with tap water before disinfection plays an important role in spray disinfection.

A case report of Dermanyssus gallinae infestation in three cats.

Science.gov (United States)

Di Palma, Antonella; Leone, Federico; Albanese, Francesco; Beccati, Massimo

2018-04-30

Dermanyssus gallinae is a major threat for the poultry industry; these mites also feed on the blood of many other birds, small mammals and potentially humans. Three cats with dermatitis attributed to D. gallinae infestation. Two 40-day-old kittens, living in a rural area, and one 7-year-old female indoor cat, were presented with a pruritic skin condition. Mite specimens were collected from the cats and examined by light and scanning electron microscopy. Cytological and histological examinations of the skin lesions were performed. A diagnosis of D. gallinae infestation was made after identification of the mites. Histological findings were compatible with eosinophilic dermatitis. Clinical improvement was noted two weeks after treatment. The two kittens showed chronic blood loss which reflects the ability of D. gallinae mites to switch host. For the indoor cat, mites were presumed to be carried by birds regularly present on the balcony of the apartment. This demonstrates that mite infestation is possible even in urban areas, through contact with birds or their abandoned nests. When birds are not present, cats or other small mammals as well as humans, can be infested. © 2018 ESVD and ACVD.

Synchrotron X-ray Investigations of Mineral-Microbe-Metal Interactions

International Nuclear Information System (INIS)

Kemner, Kenneth M.; O'Loughlin, Edward J.; Kelly, Shelly D.; Boyanov, Maxim I.

2005-01-01

Interactions between microbes and minerals can play an important role in metal transformations (i.e. changes to an element's valence state, coordination chemistry, or both), which can ultimately affect that element's mobility. Mineralogy affects microbial metabolism and ecology in a system; microbes, in turn, can affect the system's mineralogy. Increasingly, synchrotron-based X-ray experiments are in routine use for determining an element's valence state and coordination chemistry, as well as for examining the role of microbes in metal transformations.

Wide Ranging Insect Infestation of the Pioneer Mangrove Sonneratia alba by Two Insect Species along the Kenyan Coast.

Directory of Open Access Journals (Sweden)

Elisha Mrabu Jenoh

Full Text Available Insect infestation of mangroves currently threatens mangrove forest health and management. In the Western Indian Ocean region, little is known about insect damage to mangroves despite the fact that numerous infestations have occurred. In Kenya, infestations of Sonneratia alba have persisted for almost two decades, yet the taxonomic identity of the infesting pest(s, the extent of infestation, the pests' biology, the impacts of infestation on host and the ecosystem, the host's defensive strategies to the infestation are poorly understood. S. alba is a ubiquitous, pioneer mangrove species of the Indo-Pacific, occurring along the waterfront in a variety of mangrove ecosystem settings. Our main objectives were to identify the pest(s responsible for the current dieback of S. alba in Kenya, and to determine the extent of infestation. To identify the pests responsible for infestation, we trapped emergent insects and reared larvae in the laboratory. To determine the overall extent of infestation within the S. alba zone, we assessed nine sites along the entire Kenyan coastline for the presence or absence of infested mangroves. Insect infestation in two mangrove embayments (Gazi and Mida was quantified in depth. Two wood-boring insects were identified: a metarbelid moth (Lepidoptera, Cossoidea of undescribed genus and the beetle Bottegia rubra (Cerambycidae, Lamiinae.The metarbelid moth infests mangroves in both northern (from Ngomeni to Kiunga and southern regions (from Vanga to Mtwapa of the Kenyan coast. B. rubra appeared in low density in Gazi, and in high density in Mida, Kilifi, and Ngomeni, with densities gradually decreasing northward. Insect infestation levels reached 18% in Gazi and 25% of S. alba stands in Mida. Our results indicate that B. rubra has the ability to infest young mangrove trees and expand its range, posing a danger to rehabilitation efforts where plantations have been established. Thus, there is great need for forest managers to

Evolutionary adaptation in three-way interactions between plants, microbes and arthropods

NARCIS (Netherlands)

Biere, A.; Tack, A.J.M.

2013-01-01

Evolutionary adaptations in interactions between plants, microbes and arthropods are generally studied in interactions that involve only two of these groups, that is, plants and microbes, plants and arthropods or arthropods and microbes. We review the accumulating evidence from a wide variety of

Artificial infestation of Boophilus microplus in beef cattle heifers of four genetic groups

Directory of Open Access Journals (Sweden)

Ana Mary da Silva

2007-01-01

Full Text Available Resistance of beef cattle heifers to the cattle tick Boophilus microplus was evaluated by artificial infestation of 66 beef cattle heifers of the following genetic groups: 16 Nelore (NE, 18 Canchim x Nelore (CN, 16 Angus x Nelore (AN and 16 Simmental x Nelore (SN. The animals, with a mean age of 16.5 months, were maintained with no chemical tick control in a Brachiaria decumbens pasture. Four artificial infestations with 20,000 B. microplus larvae were carried out 14 days apart and from day 18 to day 22 of each infestation the number of engorged female ticks (> 4.5 mm was counted on the left side of each heifer. Data were analyzed as the percentage of return (PR = percentage of ticks counted relative to the number infested, transformed to (PR¼, and as log10 (Cij + 1, in which Cij is the number of ticks in each infestation, using the least squares method with a model that included the effects of genetic group (GG, animal within GG (error a, infestation number (I, GG x I and the residual (error b. Results indicated a significant GG x I interaction, because AN and SN heifers had a higher percentage of return than CN and NE heifers, while CN heifers showed a higher percentage of return than the NE heifers only in infestations 3 and 4. Transformed percentages of return were NE = 0.35 ± 0.06, AN = 0.89 ± 0.06, CN = 0.54 ± 0.05 and SN = 0.85 ± 0.06.

MicrobesOnline: an integrated portal for comparative and functional genomics

Energy Technology Data Exchange (ETDEWEB)

Dehal, Paramvir S.; Joachimiak, Marcin P.; Price, Morgan N.; Bates, John T.; Baumohl, Jason K.; Chivian, Dylan; Friedland, Greg D.; Huang, Katherine H.; Keller, Keith; Novichkov, Pavel S.; Dubchak, Inna L.; Alm, Eric J.; Arkin, Adam P.

2009-09-17

Since 2003, MicrobesOnline (http://www.microbesonline.org) has been providing a community resource for comparative and functional genome analysis. The portal includes over 1000 complete genomes of bacteria, archaea and fungi and thousands of expression microarrays from diverse organisms ranging from model organisms such as Escherichia coli and Saccharomyces cerevisiae to environmental microbes such as Desulfovibrio vulgaris and Shewanella oneidensis. To assist in annotating genes and in reconstructing their evolutionary history, MicrobesOnline includes a comparative genome browser based on phylogenetic trees for every gene family as well as a species tree. To identify co-regulated genes, MicrobesOnline can search for genes based on their expression profile, and provides tools for identifying regulatory motifs and seeing if they are conserved. MicrobesOnline also includes fast phylogenetic profile searches, comparative views of metabolic pathways, operon predictions, a workbench for sequence analysis and integration with RegTransBase and other microbial genome resources. The next update of MicrobesOnline will contain significant new functionality, including comparative analysis of metagenomic sequence data. Programmatic access to the database, along with source code and documentation, is available at http://microbesonline.org/programmers.html.

MicrobesOnline: an integrated portal for comparative and functional genomics

Energy Technology Data Exchange (ETDEWEB)

Dehal, Paramvir; Joachimiak, Marcin; Price, Morgan; Bates, John; Baumohl, Jason; Chivian, Dylan; Friedland, Greg; Huang, Kathleen; Keller, Keith; Novichkov, Pavel; Dubchak, Inna; Alm, Eric; Arkin, Adam

2011-07-14

Since 2003, MicrobesOnline (http://www.microbesonline.org) has been providing a community resource for comparative and functional genome analysis. The portal includes over 1000 complete genomes of bacteria, archaea and fungi and thousands of expression microarrays from diverse organisms ranging from model organisms such as Escherichia coli and Saccharomyces cerevisiae to environmental microbes such as Desulfovibrio vulgaris and Shewanella oneidensis. To assist in annotating genes and in reconstructing their evolutionary history, MicrobesOnline includes a comparative genome browser based on phylogenetic trees for every gene family as well as a species tree. To identify co-regulated genes, MicrobesOnline can search for genes based on their expression profile, and provides tools for identifying regulatory motifs and seeing if they are conserved. MicrobesOnline also includes fast phylogenetic profile searches, comparative views of metabolic pathways, operon predictions, a workbench for sequence analysis and integration with RegTransBase and other microbial genome resources. The next update of MicrobesOnline will contain significant new functionality, including comparative analysis of metagenomic sequence data. Programmatic access to the database, along with source code and documentation, is available at http://microbesonline.org/programmers.html.

[Development of a microenvironment test chamber for airborne microbe research].

Science.gov (United States)

Zhan, Ningbo; Chen, Feng; Du, Yaohua; Cheng, Zhi; Li, Chenyu; Wu, Jinlong; Wu, Taihu

2017-10-01

One of the most important environmental cleanliness indicators is airborne microbe. However, the particularity of clean operating environment and controlled experimental environment often leads to the limitation of the airborne microbe research. This paper designed and implemented a microenvironment test chamber for airborne microbe research in normal test conditions. Numerical simulation by Fluent showed that airborne microbes were evenly dispersed in the upper part of test chamber, and had a bottom-up concentration growth distribution. According to the simulation results, the verification experiment was carried out by selecting 5 sampling points in different space positions in the test chamber. Experimental results showed that average particle concentrations of all sampling points reached 10 7 counts/m 3 after 5 minutes' distributing of Staphylococcus aureus , and all sampling points showed the accordant mapping of concentration distribution. The concentration of airborne microbe in the upper chamber was slightly higher than that in the middle chamber, and that was also slightly higher than that in the bottom chamber. It is consistent with the results of numerical simulation, and it proves that the system can be well used for airborne microbe research.

Microbes in the upper atmosphere and unique opportunities for astrobiology research.

Science.gov (United States)

Smith, David J

2013-10-01

Microbial taxa from every major biological lineage have been detected in Earth's upper atmosphere. The goal of this review is to communicate (1) relevant astrobiology questions that can be addressed with upper atmosphere microbiology studies and (2) available sampling methods for collecting microbes at extreme altitudes. Precipitation, mountain stations, airplanes, balloons, rockets, and satellites are all feasible routes for conducting aerobiology research. However, more efficient air samplers are needed, and contamination is also a pervasive problem in the field. Measuring microbial signatures without false positives in the upper atmosphere might contribute to sterilization and bioburden reduction methods for proposed astrobiology missions. Intriguingly, environmental conditions in the upper atmosphere resemble the surface conditions of Mars (extreme cold, hypobaria, desiccation, and irradiation). Whether terrestrial microbes are active in the upper atmosphere is an area of intense research interest. If, in fact, microbial metabolism, growth, or replication is achievable independent of Earth's surface, then the search for habitable zones on other worlds should be broadened to include atmospheres (e.g., the high-altitude clouds of Venus). Furthermore, viable cells in the heavily irradiated upper atmosphere of Earth could help identify microbial genes or enzymes that bestow radiation resistance. Compelling astrobiology questions on the origin of life (if the atmosphere synthesized organic aerosols), evolution (if airborne transport influenced microbial mutation rates and speciation), and panspermia (outbound or inbound) are also testable in Earth's upper atmosphere.

Tick infestation in human beings in the Nilgiris and Kancheepuram district of Tamil Nadu, India.

Science.gov (United States)

Soundararajan, C; Nagarajan, K; Arul Prakash, M

2018-03-01

Thirteen human beings were infested with ticks at Sandynallah and Gudalur of the Nilgiris district and Mottur Suruvakkam of Kancheepuram district of Tamil Nadu from January 2016 to December 2016. The collected ticks were identified as Rhipicephalus haemaphysaloides , Otobius megnini and Hyalomma isaaci. The tick infestation was observed more on the persons working with animals (sheep and goats) than those working in tea estate. The person infested with R. haemaphysaloides revealed erythematous papule (2 mm size) and inflammatory lesion up to 16 days whereas, the people infested with H. isaaci showed continuous itching and irritation for > 6 months and wound formation (0.5 cm) at the biting site. The people infested with O. megnini showed irritation, vomiting sensation and fever.

Enzymes from solvent-tolerant microbes: useful biocatalysts for non-aqueous enzymology.

Science.gov (United States)

Gupta, Anshu; Khare, S K

2009-01-01

Solvent-tolerant microbes are a newly emerging class that possesses the unique ability to thrive in the presence of organic solvents. Their enzymes adapted to mediate cellular and metabolic processes in a solvent-rich environment and are logically stable in the presence of organic solvents. Enzyme catalysis in non-aqueous/low-water media is finding increasing applications for the synthesis of industrially important products, namely peptides, esters, and other trans-esterification products. Solvent stability, however, remains a prerequisite for employing enzymes in non-aqueous systems. Enzymes, in general, get inactivated or give very low rates of reaction in non-aqueous media. Thus, early efforts, and even some recent ones, have aimed at stabilization of enzymes in organic media by immobilization, surface modifications, mutagenesis, and protein engineering. Enzymes from solvent-tolerant microbes appear to be the choicest source for studying solvent-stable enzymes because of their unique ability to survive in the presence of a range of organic solvents. These bacteria circumvent the solvent's toxic effects by virtue of various adaptations, e.g. at the level of the cytoplasmic membrane, by degradation and transformation of solvents, and by active excretion of solvents. The recent screening of these exotic microbes has generated some naturally solvent-stable proteases, lipases, cholesterol oxidase, cholesterol esterase, cyclodextrin glucanotransferase, and other important enzymes. The unique properties of these novel biocatalysts have great potential for applications in non-aqueous enzymology for a range of industrial processes.

Use of Early Ripening Cultivars to Avoid Infestation and Mass Trapping to Manage Drosophila suzukii (Diptera: Drosophilidae) in Vaccinium corymbosum (Ericales: Ericaceae).

Science.gov (United States)

Hampton, Emily; Koski, Carissa; Barsoian, Olivia; Faubert, Heather; Cowles, Richard S; Alm, Steven R

2014-10-01

Use of early ripening highbush blueberry cultivars to avoid infestation and mass trapping were evaluated for managing spotted wing drosophila, Drosophila suzukii (Matsumura). Fourteen highbush blueberry cultivars were sampled for spotted wing drosophila infestation. Most 'Earliblue', 'Bluetta', and 'Collins' fruit were harvested before spotted wing drosophila oviposition commenced, and so escaped injury. Most fruit from 'Bluejay', 'Blueray', and 'Bluehaven' were also harvested before the first week of August, after which spotted wing drosophila activity led to high levels of blueberry infestation. In a separate experiment, damage to cultivars was related to the week in which fruit were harvested, with greater damage to fruit observed as the season progressed. Attractant traps placed within blueberry bushes increased nearby berry infestation by 5%, irrespective of cultivar and harvest date. The significant linear reduction in infestation with increasing distance from the attractant trap suggests that traps are influencing fly behavior to at least 5.5 m. Insecticides applied to the exterior of traps, compared with untreated traps, revealed that only 10-30% of flies visiting traps enter the traps and drown. Low trap efficiency may jeopardize surrounding fruits by increasing local spotted wing drosophila activity. To protect crops, traps for mass trapping should be placed in a perimeter outside fruit fields and insecticides need to be applied to the surface of traps or on nearby fruit to function as an attract-and-kill strategy. © 2014 Entomological Society of America.

Temperature Effects on Olive Fruit Fly Infestation in the FlySim Cellular Automata Model

Science.gov (United States)

Bruno, Vincenzo; Baldacchini, Valerio; di Gregorio, Salvatore

FlySim is a Cellular Automata model developed for simulating infestation of olive fruit flies (Bactrocera Oleae) on olive (Olea europaea) groves. The flies move into the groves looking for mature olives where eggs are spawn. This serious agricultural problem is mainly tackled by using chemical agents at the first signs of the infestation, but organic productions with no or few chemicals are strongly requested by the market. Oil made with infested olives is poor in quality, nor olives are suitable for selling in stores. The FlySim model simulates the diffusion of flies looking for mature olives and the growing of flies due to atmospheric conditions. Foreseeing an infestation is the best way to prevent it and to reduce the need of chemicals in agriculture. In this work we investigated the effects of temperature on olive fruit flies and resulting infestation during late spring and summer.

MEMS and the microbe

NARCIS (Netherlands)

Ingham, C.J.; Vlieg, J.E.T.V.H.

2008-01-01

In recent years, relatively simple MEMS fabrications have helped accelerate our knowledge of the microbial cell. Current progress and challenges in the application of lab-on-a-chip devices to the viable microbe are reviewed. Furthermore, the degree to which microbiologists are becoming the engineers

Host-Microbe Interactions in Microgravity: Assessment and Implications

Directory of Open Access Journals (Sweden)

Jamie S. Foster

2014-05-01

Full Text Available Spaceflight imposes several unique stresses on biological life that together can have a profound impact on the homeostasis between eukaryotes and their associated microbes. One such stressor, microgravity, has been shown to alter host-microbe interactions at the genetic and physiological levels. Recent sequencing of the microbiomes associated with plants and animals have shown that these interactions are essential for maintaining host health through the regulation of several metabolic and immune responses. Disruptions to various environmental parameters or community characteristics may impact the resiliency of the microbiome, thus potentially driving host-microbe associations towards disease. In this review, we discuss our current understanding of host-microbe interactions in microgravity and assess the impact of this unique environmental stress on the normal physiological and genetic responses of both pathogenic and mutualistic associations. As humans move beyond our biosphere and undergo longer duration space flights, it will be essential to more fully understand microbial fitness in microgravity conditions in order to maintain a healthy homeostasis between humans, plants and their respective microbiomes.

Host-microbe interactions in microgravity: assessment and implications.

Science.gov (United States)

Foster, Jamie S; Wheeler, Raymond M; Pamphile, Regine

2014-05-26

Spaceflight imposes several unique stresses on biological life that together can have a profound impact on the homeostasis between eukaryotes and their associated microbes. One such stressor, microgravity, has been shown to alter host-microbe interactions at the genetic and physiological levels. Recent sequencing of the microbiomes associated with plants and animals have shown that these interactions are essential for maintaining host health through the regulation of several metabolic and immune responses. Disruptions to various environmental parameters or community characteristics may impact the resiliency of the microbiome, thus potentially driving host-microbe associations towards disease. In this review, we discuss our current understanding of host-microbe interactions in microgravity and assess the impact of this unique environmental stress on the normal physiological and genetic responses of both pathogenic and mutualistic associations. As humans move beyond our biosphere and undergo longer duration space flights, it will be essential to more fully understand microbial fitness in microgravity conditions in order to maintain a healthy homeostasis between humans, plants and their respective microbiomes.

Head lice infestation in school children of a low socio- economy ...

African Journals Online (AJOL)

STORAGESEVER

2008-07-04

Jul 4, 2008 ... In the old Gaza city and the rural village Jabalia within the Gaza Governorate the rate of infestation with lice was 14.1% in the primary school girls. (Al-Shawa, 2006). In a high socio-economy area in Izmir,. Turkey, 4.2% of the studied population of the secondary and elementary school children were infested ...

Thermo-tolerant phosphate-solubilizing microbes for multi-functional biofertilizer preparation.

Science.gov (United States)

Chang, Cheng-Hsiung; Yang, Shang-Shyng

2009-02-01

In order to prepare the multi-functional biofertilizer, thermo-tolerant phosphate-solubilizing microbes including bacteria, actinomycetes, and fungi were isolated from different compost plants and biofertilizers. Except Streptomycesthermophilus J57 which lacked pectinase, all isolates possessed amylase, CMCase, chitinase, pectinase, protease, lipase, and nitrogenase activities. All isolates could solubilize calcium phosphate and Israel rock phosphate; various isolates could solubilize aluminum phosphate, iron phosphate, and hydroxyapatite. During composting, biofertilizers inoculated with the tested microbes had a significantly higher temperature, ash content, pH, total nitrogen, soluble phosphorus content, and germination rate than non-inoculated biofertilizer; total organic carbon and carbon-to-nitrogen ratio showed the opposite pattern. Adding these microbes can shorten the period of maturity, improve the quality, increase the soluble phosphorus content, and enhance the populations of phosphate-solubilizing and proteolytic microbes in biofertilizers. Therefore, inoculating thermo-tolerant phosphate-solubilizing microbes into agricultural and animal wastes represents a practical strategy for preparing multi-functional biofertilizer.

Head Lice Infestation (Pediculosis and Associated Factors among Primary School Girls in Sirik County, Southern Iran

Directory of Open Access Journals (Sweden)

Alireza Sanei-Dehkordi

2017-12-01

Full Text Available Background Head lice infestation (pediculosis is a serious health problem that can cause a high level of anxiety and psychological frustration, especially in developing countries.Socio-demographic factors are important determinants of the occurrence of head lice infestation. This study aimed to determine the head lice infestations and the factors affecting the rate of infestationin primary school girls.   Materials and Methods In this cross-sectional study, a total of 358 school girls from two urban and three rural primary school girls in Sirik County, Southern Iran, were randomly selected. For the diagnosis of head lice infestation, students were examined carefully by visual inspection of the scalp and hair for the presence of lice. Self-administered questionnaire was used to collect data on socio-demographic and associated factors of head lice infestation. SPSS version 21.0 was used to analyze the data. Results The prevalence of head lice infestation among primary school girls was 56.15%. There were significant associations between head lice infestation and age (p

Annoying vacation souvenir: Fish tapeworm (Diphyllobothrium sp.) infestation in an Austrian fisherman.

Science.gov (United States)

Stadlbauer, Vanessa; Haberl, Renate; Langner, Cord; Krejs, Günter J; Eherer, Andreas

2005-11-01

Diphyllobothriosis is infestation with the fish tapeworm. Although the worldwide incidence has decreased in recent decades, increased travel and the new popularity of dishes involving raw fish (e.g. sushi) may provide a higher risk of infestation in formerly low-risk areas. We report an Austrian fisherman who passed a 75 cm tapeworm segment in his stool. Infestation presumably occurred 14 months earlier during a fishing tour in Alaska. At presentation, the patient was asymptomatic, reported no weight loss and showed neither anaemia nor eosinophilia. He was cured with a single dose of 10 mg/kg body weight praziquantel.

Mountain pine beetle infestation of lodgepole pine in areas of water diversion.

Science.gov (United States)

Smolinski, Sharon L; Anthamatten, Peter J; Bruederle, Leo P; Barbour, Jon M; Chambers, Frederick B

2014-06-15

The Rocky Mountains have experienced extensive infestations from the mountain pine beetle (Dendroctonus ponderosae Hopkins), affecting numerous pine tree species including lodgepole pine (Pinus contorta Dougl. var. latifolia). Water diversions throughout the Rocky Mountains transport large volumes of water out of the basins of origin, resulting in hydrologic modifications to downstream areas. This study examines the hypothesis that lodgepole pine located below water diversions exhibit an increased incidence of mountain pine beetle infestation and mortality. A ground survey verified diversion structures in a portion of Grand County, Colorado, and sampling plots were established around two types of diversion structures, canals and dams. Field studies assessed mountain pine beetle infestation. Lodgepole pines below diversions show 45.1% higher attack and 38.5% higher mortality than lodgepole pines above diversions. These findings suggest that water diversions are associated with increased infestation and mortality of lodgepole pines in the basins of extraction, with implications for forest and water allocation management. Copyright © 2014 Elsevier Ltd. All rights reserved.

Define Colony Number of Subterranean Termites Coptotermes gestroi (Isoptera: Rhinotermitidae) in Selected Infested Structures

International Nuclear Information System (INIS)

Abdul Hafiz Abdul Majid; Abu Hassan Ahmad

2015-01-01

Termites are one of the social insects living in large colonies that can cause economic loss. The objective of this study was to estimate foraging territory of infested subterranean termites on building structure. A mark-recapture study was conducted on eight Coptotermes gestroi colonies located at selected infested building structures in Penang, Malaysia. From the foraging study, the population of C. gestroi was estimated to be within the range of 106,592±6,968 to 4,185,000±2,127,328. Additionally, the foraging territory was from 13 to 300 m 2 of the infested building structures. Meanwhile the maximum foraging distance was from 4 to 30 m of the infested structures. The results indicated that each of the building structures was infested by a single colony. This study also showed that the triple mark recapture technique used to estimate the population size of the termite colony was capable of providing rough estimates of foraging population of C. gestroi. (author)

Infestation of Pseudopiazurus papayanus (Marshall) (Coleoptera: Curculionidae) on Carica spp. and Vasconcella spp. genotypes

International Nuclear Information System (INIS)

Fancelli, Marilene; Sanches, Nilton F.; Dantas, Jorge L.L.; Caldas, Ranulfo C.; Morales, Cinara F.G.

2008-01-01

The papaya borer weevil, Pseudopiazurus papayanus (Marshall), is generally considered a secondary pest, but it has been reported in high infestations in Northeast Brazil. This work aimed at evaluating the occurrence of P. papayanus and reporting its infestation level in papaya genotypes kept at the germplasm bank of EMBRAPA Cassava and Tropical Fruits (Cruz das Almas, Bahia, Brazil). The number of larvae, pupae and adults found in each plant of 65 Carica spp. genotypes and of three Vasconcella spp. genotypes was registered in three to five plants of each genotype, by cutting the exsudating trunks lengthwise. Papaya borer weevil was found in C. papaya and V. cauliflora but not in those of V. quercifolia. Among the evaluated genotypes, 52.4% of those belonging to the Solo group were infested, against 25.0% of the Formosa group. Larval infestation was the best criterion for sorting out genotypes concerning this insect infestation. This is also the first occurrence of the papaya borer weevil . (author)

Soil-Plant-Microbe Interactions in Stressed Agriculture Management: A Review

Institute of Scientific and Technical Information of China (English)

Shobhit Raj VIMAL; Jay Shankar SINGH; Naveen Kumar ARORA; Surendra SINGH

2017-01-01

The expected rise in temperature and decreased precipitation owing to climate change and unabated anthropogenic activities add complexity and uncertainty to agro-industry.The impact of soil nutrient imbalance,mismanaged use of chemicals,high temperature,flood or drought,soil salinity,and heavy metal pollutions,with regard to food security,is increasingly being explored worldwide.This review describes the role of soil-plant-microbe interactions along with organic manure in solving stressed agriculture problems.Beneficial microbes associated with plants are known to stimulate plant growth and enhance plant resistance to biotic (diseases) and abiotic (salinity,drought,pollutions,etc.) stresses.The plant growth-promoting rhizobacteria (PGPR) and mycorrhizae,a key component of soil microbiota,could play vital roles in the maintenance of plant fitness and soil health under stressed environments.The application of organic manure as a soil conditioner to stressed soils along with suitable microbial strains could further enhance the plant-microbe associations and increase the crop yield.A combination of plant,stress-tolerant microbe,and organic amendment represents the tripartite association to offer a favourable environment to the proliferation of beneficial rhizosphere microbes that in turn enhance the plant growth performance in disturbed agro-ecosystem.Agriculture land use patterns with the proper exploitation of plant-microbe associations,with compatible beneficial microbial agents,could be one of the most effective strategies in the management of the concerned agriculture lands owing to climate change resilience.However,the association of such microbes with plants for stressed agriculture management still needs to be explored in greater depth.

Gamma irradiation as a quarantine treatment for carambolas infested with Caribbean fruit flies

International Nuclear Information System (INIS)

Gould, W.P.; Windeguth, D.L. von

1991-01-01

Carambolas infested with the Caribbean fruit fly Anastrepha suspensa (Loew), eggs and larvae were exposed to ionizing gamma radiation. Probit 9 was estimated to be 22.95 Gy (95% fiducial limits 16.68 Gy - 49.73 Gy). Over 100,000 immature A. suspensa infesting carambolas were treated at 50 Gy with no adult survivors. This dose did not cause any observable damage to the fruit. The 50 Gy dose satisfies quarantine requirements for treatment of fruits exposed from fruit fly infested areas. (author) [es

Surface properties of beached plastics.

Science.gov (United States)

Fotopoulou, Kalliopi N; Karapanagioti, Hrissi K

2015-07-01

Studying plastic characteristics in the marine environment is important to better understand interaction between plastics and the environment. In the present study, high-density polyethylene (HDPE), polyethylene terephalate (PET), and polyvinyl chloride (PVC) samples were collected from the coastal environment in order to study their surface properties. Surface properties such as surface functional groups, surface topography, point of zero charge, and color change are important factors that change during degradation. Eroded HDPE demonstrated an altered surface topography and color and new functional groups. Eroded PET surface was uneven, yellow, and occasionally, colonized by microbes. A decrease in Fourier transform infrared (FTIR) peaks was observed for eroded PET suggesting that degradation had occurred. For eroded PVC, its surface became more lamellar and a new FTIR peak was observed. These surface properties were obtained due to degradation and could be used to explain the interaction between plastics, microbes, and pollutants.

Plant-microbe and plant-insect interactions meet common grounds

NARCIS (Netherlands)

Schenk, P.; McGrath, K.C.; Lorito, M.; Pieterse, C.M.J.

2008-01-01

Plant–microbe and plant–insect interactions are of global importance for agriculture and of high interest to many plant scientists, microbiologists and entomologists. Traditionally, plant–microbe and plant–insect interactions have been looked at as two separate issues, but in recent years it has

Microbes as interesting source of novel insecticides: A review ...

African Journals Online (AJOL)

... strains with good insecticidal properties can be identified, evaluated and utilized for pest control. This paper reviews the insecticidal properties of microbes and their potential utility in pest management. Keywords: Microbes, insecticides, metabolites, pest management. African Journal of Biotechnology, Vol 13(26) 2582- ...

Microbial electrosynthesis: understanding and strengthening microbe-electrode interactions

DEFF Research Database (Denmark)

Tremblay, Pier-Luc; Höglund, Daniel; Ammam, Fariza

2014-01-01

in the last decade that could significantly change the current ways of synthesizing chemicals. MES is a process in which electroautotrophic microbes reduce CO2 to multicarbon organics using electrical current as a source of electron. Electricity necessary for MES can be harvested from renewable resources...... relying on co-cultures and investigating extracellular electron transfer from the cathode to the microbes are some of the strategies that we are implementing to transform MES into a commercially viable technology....... such as solar energy, wind turbine or wastewater treatment processes. The net outcome is that renewable energy get store in the covalent bonds of valuable chemicals synthesized from greenhouse gas. However, low electron transferrates from the electrode to microbes, poor adherence of cells on the electrode...

A molecular study of microbe transfer between distant environments.

Science.gov (United States)

Hooper, Sean D; Raes, Jeroen; Foerstner, Konrad U; Harrington, Eoghan D; Dalevi, Daniel; Bork, Peer

2008-07-09

Environments and their organic content are generally not static and isolated, but in a constant state of exchange and interaction with each other. Through physical or biological processes, organisms, especially microbes, may be transferred between environments whose characteristics may be quite different. The transferred microbes may not survive in their new environment, but their DNA will be deposited. In this study, we compare two environmental sequencing projects to find molecular evidence of transfer of microbes over vast geographical distances. By studying synonymous nucleotide composition, oligomer frequency and orthology between predicted genes in metagenomics data from two environments, terrestrial and aquatic, and by correlating with phylogenetic mappings, we find that both environments are likely to contain trace amounts of microbes which have been far removed from their original habitat. We also suggest a bias in direction from soil to sea, which is consistent with the cycles of planetary wind and water. Our findings support the Baas-Becking hypothesis formulated in 1934, which states that due to dispersion and population sizes, microbes are likely to be found in widely disparate environments. Furthermore, the availability of genetic material from distant environments is a possible font of novel gene functions for lateral gene transfer.

A molecular study of microbe transfer between distant environments.

Directory of Open Access Journals (Sweden)

Sean D Hooper

Full Text Available BACKGROUND: Environments and their organic content are generally not static and isolated, but in a constant state of exchange and interaction with each other. Through physical or biological processes, organisms, especially microbes, may be transferred between environments whose characteristics may be quite different. The transferred microbes may not survive in their new environment, but their DNA will be deposited. In this study, we compare two environmental sequencing projects to find molecular evidence of transfer of microbes over vast geographical distances. METHODOLOGY: By studying synonymous nucleotide composition, oligomer frequency and orthology between predicted genes in metagenomics data from two environments, terrestrial and aquatic, and by correlating with phylogenetic mappings, we find that both environments are likely to contain trace amounts of microbes which have been far removed from their original habitat. We also suggest a bias in direction from soil to sea, which is consistent with the cycles of planetary wind and water. CONCLUSIONS: Our findings support the Baas-Becking hypothesis formulated in 1934, which states that due to dispersion and population sizes, microbes are likely to be found in widely disparate environments. Furthermore, the availability of genetic material from distant environments is a possible font of novel gene functions for lateral gene transfer.

Microfabricated microbial fuel cell arrays reveal electrochemically active microbes.

Directory of Open Access Journals (Sweden)

Huijie Hou

Full Text Available Microbial fuel cells (MFCs are remarkable "green energy" devices that exploit microbes to generate electricity from organic compounds. MFC devices currently being used and studied do not generate sufficient power to support widespread and cost-effective applications. Hence, research has focused on strategies to enhance the power output of the MFC devices, including exploring more electrochemically active microbes to expand the few already known electricigen families. However, most of the MFC devices are not compatible with high throughput screening for finding microbes with higher electricity generation capabilities. Here, we describe the development of a microfabricated MFC array, a compact and user-friendly platform for the identification and characterization of electrochemically active microbes. The MFC array consists of 24 integrated anode and cathode chambers, which function as 24 independent miniature MFCs and support direct and parallel comparisons of microbial electrochemical activities. The electricity generation profiles of spatially distinct MFC chambers on the array loaded with Shewanella oneidensis MR-1 differed by less than 8%. A screen of environmental microbes using the array identified an isolate that was related to Shewanella putrefaciens IR-1 and Shewanella sp. MR-7, and displayed 2.3-fold higher power output than the S. oneidensis MR-1 reference strain. Therefore, the utility of the MFC array was demonstrated.

Nutrient-Dependent Impact of Microbes on Drosophila suzukii Development.

Science.gov (United States)

Bing, XiaoLi; Gerlach, Joseph; Loeb, Gregory; Buchon, Nicolas

2018-03-20

Drosophila suzukii Matsumura is an invasive species of vinegar fly that has become a prominent pest of berries and other soft-skinned fruits. Unlike most other Drosophila species, female D. suzukii flies lay their eggs in ripening and ripe fruits and larvae develop within the fruit. To understand how D. suzukii larvae utilize ripe and ripening fruits, which usually have low levels of protein, we investigated the microbiota of field-captured and laboratory-reared D. suzukii flies and further examined the combined influence of diet and microbes on host fitness. Field-captured flies were associated with diverse microbiota, which varied significantly with sampling location and season. In contrast, laboratory-reared flies possessed strikingly lower bacterial abundance and diversity. A comparison of conventionally reared (CR) and germ-free (GF) flies revealed that the microbiota of D. suzukii does not alter its development significantly but decreases its life span under conditions of a nutrient-sufficient diet. However, the microbiota is essential for D. suzukii development on strawberry-based or blueberry-based fruit diets. This developmental failure could be rescued by reassociation with single bacterial or fungal species or by the addition of a high quantity of heat-killed microbes. In addition, we found that proteins are limiting with respect to fly development on fruit-based diets and that GF flies show signs of protein starvation. Taken together, our study results demonstrate that the microbiota provides key proteins required for the development of D. suzukii reared on fresh fruit. Our work shows that the impact of microbes on fly fitness depends strongly on nutritional conditions. IMPORTANCE Animals are commonly associated with specific microbes, which play important roles in host development and fitness. However, little information about the function of microbes has been available for the important invasive pest Drosophila suzukii , also known as Spotted

Tick infestation on wild snakes in northern part of western Ghats of India.

Science.gov (United States)

Pandit, Pranav; Bandivdekar, Ruta; Geevarghese, G; Pande, Satish; Mandke, Omkar

2011-05-01

In total, 167 individuals of 30 species of snakes belonging to 22 genera and five families were examined for tick infestation from November 2008 to March 2010. Only two species of snakes, Ptyas mucosa (L., 1758) (Indian rat snake) and Naja naja (L., 1758) (spectacled cobra), were found infested by ticks. All ticks collected were identified to be Amblyomma gervaisi [previously Aponomma gervaisi (Lucas, 1847) 1. The average prevalence of these ticks on Indian rat snakes (n=48) was 29.16%, with abundance of 7.02 ticks per individual; on spectacled cobras (n=20), average prevalence was 30.00%, with abundance of 6.9 ticks per individual. The nymphs and males were predominant. All the ticks were found on the dorsal aspect of the body of the snake, and no ticks were recorded on the head, tail, or ventral body. The rate of tick infestation was highest in scrubland and was lowest in evergreen forests. Female Indian rat snakes showed higher tick infestation rates than male Indian rat snakes. Using Mann-Whitney U test, we found that longer snakes of both species had significantly higher rate of tick infestation in both the species of snakes.

Identification of microbes from the surfaces of food-processing lines based on the flow cytometric evaluation of cellular metabolic activity combined with cell sorting.

Science.gov (United States)

Juzwa, W; Duber, A; Myszka, K; Białas, W; Czaczyk, K

2016-09-01

In this study the design of a flow cytometry-based procedure to facilitate the detection of adherent bacteria from food-processing surfaces was evaluated. The measurement of the cellular redox potential (CRP) of microbial cells was combined with cell sorting for the identification of microorganisms. The procedure enhanced live/dead cell discrimination owing to the measurement of the cell physiology. The microbial contamination of the surface of a stainless steel conveyor used to process button mushrooms was evaluated in three independent experiments. The flow cytometry procedure provided a step towards monitoring of contamination and enabled the assessment of microbial food safety hazards by the discrimination of active, mid-active and non-active bacterial sub-populations based on determination of their cellular vitality and subsequently single cell sorting to isolate microbial strains from discriminated sub-populations. There was a significant correlation (r = 0.97; p vitality and the identification of species from defined sub-populations, although the identified microbes were limited to culturable cells.

Distribution and infestation levels of Crypticerya multicicatrices Kondo and Unruh (Hemiptera: Monophlebidae on San Andrés island

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Takumasa Kondo Kondo

2014-01-01

Full Text Available The fluted scale Crypticerya multicicatrices (Hemiptera: Monophlebidae is an invasive insect that became a major pest on the island of San Andrés. To generate control strategies for this insect, its distribution and infestation levels on palm species, fruit trees, leguminous trees and other plant species were determined during January 14–18, 2013. A total of 96 points were sampled in order to determine the distribution of the insect on the island. During the study, the fluted scale was found distributed throughout the island of San Andrés, including Haynes Cay and Johnny Cay. The palms were the plants with the highest levels of infestation, 70.8% had some degree of infestation (37.5% high infestation levels; followed by fruit trees which had 65.6% with some degree of infestation (30.2% high infestation levels; followed by leguminous trees which had 59.6% with some degree of infestation (13.5% high infestation levels and finally “other hosts” which had 51.1% with some level of infestation (11.5% high infestation levels. This study is the first detailed mapping of C. multicicatrices on the island of San Andrés which will become the basis for future work on the population dynamics of the fluted scale and its distribution on the island.

Seasonal pattern of infestation by the carob moth Ectomyelois ceratoniae in pomegranate cultivars

NARCIS (Netherlands)

Hosseini, S.A.; Goldansaz, S.H.; Fotoukkiaii, S.M.; Menken, S.B.J.; Groot, A.T.

2017-01-01

Pomegranate (Punica granatum L.) orchards in the Middle East are typically composed of a mix of different cultivars in which variation in fruit infestation by carob moth Ectomyelois ceratoniae (Zeller) (Lepidoptera: Pyralidae) has been observed. However, seasonal variation in infestation and

Preventive efficacy of Frontline® Combo and Certifect® against Dipylidium caninum infestation of cats and dogs using a natural flea (Ctenocephalides felis) infestation model.

Science.gov (United States)

Beugnet, Frederic; Delport, Peet; Luus, Hermann; Crafford, Dione; Fourie, Josephus

2013-01-01

Two studies were performed to evaluate the effectiveness of two monthly topical anti-flea products for the prevention of Dipylidium caninum infestations in cats and dogs. A single treatment with Frontline(®) Combo spot-on for cats (fipronil-(S)-methoprene) and two successive monthly treatments of Certifect(®) for dogs (fipronil-amitraz-(S)-methoprene) were assessed for the prevention of D. caninum infestations following weekly challenges of treated cats or dogs with metacestode naturally-infected fleas. The rate of infestations using the model in cats versus dogs explains the choice of a 1-month trial in cats and a 2-month trial in dogs. The experimental flea-infection model resulted in a range of 22-53% of the fleas being infected by Dipylidium cysticercoids. The arithmetic mean flea counts recorded for the untreated cats ranged from 51.2 to 68. The geometric mean flea counts recorded for the Frontline Combo treated cats differed significantly (p caninum proglottids by cats, 100% (6/6) of the control cats and 0% (0/6) of Frontline Combo treated cats were infested with D. caninum. Frontline Combo spot-on for cats was therefore 100% effective in preventing infection with D. caninum. In dogs, 7 out of the 8 control group dogs (87.5%) produced proglottids following infestation of infected fleas, whereas 0 out of 8 dogs (0%) in the treated group were infected. The infection rates of the two groups were significantly different. The percent effectiveness for the Certifect treatment group for the prevention of D. caninum infection was 100% during this 2-month trial. No treatment-related adverse events were observed in either cats or dogs during these studies. © F. Beugnet et al., Published by EDP Sciences 2013.

Influence of grooming on Rhipicephalus microplus tick infestation and serum cortisol rates

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Fernanda Ferreira Pessoa

2012-12-01

Full Text Available Grooming is an important factor on animal resistance to ticks. Rhipicephalus microplus is the most pathogenic cattle tick in Brazil causing death in susceptible animals. Cortisol is the hormone of stress. The influence of grooming on tick infestation and serum cortisol level was studied in 16 Holstein heifers from fifth to eight-month-old. They were infested with 10,000 larvae in June/20/2011. Half of them used a necklace made of wood strips and had an infestation chamber made by cotton cloth covering about 50 cm diameter of the shaved flank, fixed at the skin in both sides with adhesive to prevent larvae to escape from the infestation chamber and the amount of larvae was divided into the two chambers. Such artifacts had the purpose to avoid grooming. The heifers remained all the tick parasitic life cycle in individual pens inside a closed shed at Instituto de Zootecnia, in Nova Odessa, São Paulo State. Tick females bigger than 4.5 mm were counted in the right side from day 20 to 22 after the artificial infestation. The tick recovery rate was calculated by adding and multiplying by two the number of ticks counted, assuming that 5,000 female larvae had infested the cattle. Immediately before infestation (day 0 and in day2, day8, and day17 after infestation, blood samples were collected using vacuum tubes, in the morning (8:30 – 10:00 A.M.. Cortisol was measured by immunoassay (EIA and the D.O. (optical density at 420 nm was converted in ng of cortisol/mL of serum sample. The experimental design was randomized with 8 replications. Data from serum cortisol were analyzed using the General linear models of the SPSS® statistical package (version 12.0 using the presence of the artifacts (necklace and chamber and sampling day as independent variables and serum cortisol as the dependent variable. In the analyse of tick recovery rate, the presence of artifacts was the independent variable and tick recovery rate the dependent variable. The presence of

Rat infestation associated with environmental deficiencies in an urban slum community with high risk of leptospirosis transmission.

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Santos, Norlan de Jesus; Sousa, Erica; Reis, Mitermayer G; Ko, Albert I; Costa, Federico

2017-03-09

We analyzed environmental factors that provide food, water and harborage to rodents and the risk of household rodent infestation in a slum community with a high risk of leptospirosis transmission. Detailed environmental surveys were performed in 221 households. Multivariate regression models evaluated the association between rodent infestation and socioeconomic status and environmental attributes obtained from Geographical Information System surveys. The general household infestation rate was 45.9%. Rattus norvegicus signs were the most prevalent, present in 74% of the infested households. The risk for rodent infestation was associated with environmental factors supporting harborage for rats, such as dilapidated fences/walls (OR: 8.95; 95%CI: 2.42-33.12) and households built on an earthen slope (OR: 4.68; 95%CI: 2.23-9.81). An increase of 1 meter from the nearest sewer was associated with a 3% (95%CI: 1%-5%) decrease in the risk of rodent infestation. A lack of sanitation where poor people live provides factors for rat infestation and could the target of educational interventions.

Prevalence and associated risk factors for bovine tick infestation in two districts of lower Punjab, Pakistan.

Science.gov (United States)

Sajid, Muhammad Sohail; Iqbal, Zafar; Khan, Muhammad Nisar; Muhammad, Ghulam; Khan, Muhammad Kasib

2009-12-01

Bovine tick infestation is still a serious nuisance to livestock and the dairy industry of Pakistan. The current paper reports the prevalence and associated risk factors for bovine tick infestation in the districts Layyah and Muzaffargarh of lower Punjab, Pakistan. A questionnaire-based survey was conducted to identify and to quantify variation in the prevalence of bovine tick infestation with respect to host (age, species, sex, and breed) and environmental (geographical area and climate) determinants. Multiple stage cluster random sampling was used and 3500 cattle and buffaloes from the two districts were selected. Prevalence of bovine tick infestation was significantly higher (OR=1.95; p2025; 47.3%). Hyalomma anatolicum anatolicum was the major tick species (33.5%; 1173/3500), followed by Rhipicephalus sanguineus (13%; 456/3500). The highest monthly prevalence in both the districts was found in July. Ticks were not found in Layyah from November to March and in Muzaffargarh from December to March. The average number of ticks was proportional to the prevalence of infestation. Also, tick infestation in a 7cmx7cm dewlap of the animal was proportional to that of the rest of body. Prevalence of tick infestation was associated (p<0.05) with district, host species and breed. In cattle, prevalence of tick infestation was associated (p<0.05) with age and sex of host. The results of this study provide better understanding of disease epidemiology in the study districts, which will help for planning of control strategies.

Exotic plant infestation is associated with decreased modularity and increased numbers of connectors in mixed-grass prairie pollination networks

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Larson, Diane L.; Rabie, Paul A.; Droege, Sam; Larson, Jennifer L.; Haar, Milton

2016-01-01

The majority of pollinating insects are generalists whose lifetimes overlap flowering periods of many potentially suitable plant species. Such generality is instrumental in allowing exotic plant species to invade pollination networks. The particulars of how existing networks change in response to an invasive plant over the course of its phenology are not well characterized, but may shed light on the probability of long-term effects on plant-pollinator interactions and the stability of network structure. Here we describe changes in network topology and modular structure of infested and non-infested networks during the flowering season of the generalist non-native flowering plant, Cirsium arvense in mixed-grass prairie at Badlands National Park, South Dakota, USA. Objectives were to compare network-level effects of infestation as they propagate over the season in infested and non-infested (with respect to C. arvense) networks. We characterized plant-pollinator networks on 5 non-infested and 7 infested 1-ha plots during 4 sample periods that collectively covered the length of C. arvense flowering period. Two other abundantly-flowering invasive plants were present during this time: Melilotus officinalis had highly variable floral abundance in both C. arvense-infested and non-infested plots andConvolvulus arvensis, which occurred almost exclusively in infested plots and peaked early in the season. Modularity, including roles of individual species, and network topology were assessed for each sample period as well as in pooled infested and non-infested networks. Differences in modularity and network metrics between infested and non-infested networks were limited to the third and fourth sample periods, during flower senescence of C. arvenseand the other invasive species; generality of pollinators rose concurrently, suggesting rewiring of the network and a lag effect of earlier floral abundance. Modularity was lower and number of connectors higher in infested

Expression and Activity of Lysozyme in Apis Mellifera Carnica Brood Infested with Varroa Destructor

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Zaobidna Ewa A.

2017-12-01

Full Text Available Varroa destructor is a parasitic mite that attacks the honey bee, and previous studies have suggested that parasitosis caused by this mite is accompanied by immunosuppresion in the host. In this study, the effect of mite infestation on the expression of the lysozyme-1 (lys-1 gene and lysozyme activity in Apis mellifera carnica was determined. The experiment was carried out on the five developmental stages of honey bee workers and drones. Developmental and gender-related differences in gene expression and lysozyme activity were observed in a Varroa destructor-infested brood. The relative expression of the lys-1 gene increased in a infested worker brood and decreased in a drone brood except for P3 pupae. In the final stage of development, the lys-1 gene expression was significantly lower in infested newly emerged workers and drones. Changes in the relative expression of the lys-1 gene in infested individuals was poorly manifested at the level of enzyme activity, whereas at the two final stages of development (P5 and I there was a positive correlation between relative lys-1 expression and lysozyme activity in infested bees of both genders (r=0.988, r=0.999, respectively. The results of this study indicate that V. destructor influences the lysozyme-linked immune response in bees.

Parasitic infestation in appendicitis. A retrospective analysis of 660 patients and brief literature review

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Eren Altun

2017-03-01

Full Text Available Objectives: To investigate the incidence of parasitic infestations and inflammation accompanying parasitosis in a series of appendectomy cases. Methods: Six-hundred-sixty patients who had undergone appendectomy in Bingöl State Hospital, Bingol, Turkey with the preliminary diagnosis of appendicitis between January 2012 and February 2015 were included in this retrospective study. They were retrospectively evaluated in terms of age, gender and pathological findings. Cases diagnosed with parasitic infestations were re-evaluated histopathologically for inflammatory response. Results: The mean age was 19.6 years, and the male/female ratio was 1.8. When evaluated in terms of histopathological diagnoses, 573 (86.8% were diagnosed as acute appendicitis, and parasitic infestation was identified in 12 (1.8%. Among cases with parasitic infestation, Enterobius vermicularis was identified in 9 (75% and Taenia in 3 (25% cases. Of cases with Enterobius vermicularis, 4 (44.4% had lymphoid hyperplasia, 1 (11.1% had normal-structured appendix vermiformis, and 4 (44.4% had findings of acute appendicitis. All cases with taeniasis had an inflammatory response: acute appendicitis was identified in 2 (66% and acute gangrenous appendicitis in 1 (33% of them. Conclusion: Parasitic infestations are among the probable causes in appendicitis etiology and should be kept in mind during differential diagnosis. However, whether every parasitic infestation leads to appendiceal inflammatory response is controversial.

Multiple ectoparasites infest Microcebus griseorufus at Beza ...

African Journals Online (AJOL)

Multiple ectoparasites infest Microcebus griseorufus at Beza Mahafaly Special Reserve, Madagascar. IA Rodriguez, E Rasoazanabary, LR Godfrey. Abstract. The mouse lemur Microcebus griseorufus at the Beza Mahafaly Special Reserve and general vicinity in southwestern Madagascar were surveyed for ectoparasites as ...

Surveillance study of vector species on board passenger ships, Risk factors related to infestations

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Hatzoglou Chrissi

2008-03-01

Full Text Available Abstract Background Passenger ships provide conditions suitable for the survival and growth of pest populations. Arthropods and rodents can gain access directly from the ships' open spaces, can be carried in shiploads, or can be found on humans or animals as ectoparasites. Vectors on board ships may contaminate stored foods, transmit illness on board, or, introduce diseases in new areas. Pest species, ship areas facilitating infestations, and different risk factors related to infestations were identified in 21 ferries. Methods 486 traps for insects and rodents were placed in 21 ferries. Archives of Public Health Authorities were reviewed to identify complaints regarding the presence of pest species on board ferries from 1994 to 2004. A detail questionnaire was used to collect data on ship characteristics and pest control practices. Results Eighteen ferries were infested with flies (85.7%, 11 with cockroaches (52.3%, three with bedbugs, and one with fleas. Other species had been found on board were ants, spiders, butterflies, beetles, and a lizard. A total of 431 Blattella germanica species were captured in 28 (9.96% traps, and 84.2% of them were nymphs. One ship was highly infested. Cockroach infestation was negatively associated with ferries in which Hazard Analysis Critical Control Point system was applied to ensure food safety on board (Relative Risk, RR = 0.23, p = 0.03, and positively associated with ferries in which cockroaches were observed by crew (RR = 4.09, p = 0.007, no cockroach monitoring log was kept (RR = 5.00, p = 0.02, and pesticide sprays for domestic use were applied by crew (RR = 4.00, p = 0.05. Cockroach infested ships had higher age (p = 0.03. Neither rats nor mice were found on any ship, but three ferries had been infested with a rodent in the past. Conclusion Integrated pest control programs should include continuing monitoring for a variety of pest species in different ship locations; pest control measures should be more

The Microbe Directory: An annotated, searchable inventory of microbes’ characteristics

Science.gov (United States)

Mohammad, Rawhi; Danko, David; Bezdan, Daniela; Afshinnekoo, Ebrahim; Segata, Nicola; Mason, Christopher E.

2018-01-01

The Microbe Directory is a collective research effort to profile and annotate more than 7,500 unique microbial species from the MetaPhlAn2 database that includes bacteria, archaea, viruses, fungi, and protozoa. By collecting and summarizing data on various microbes’ characteristics, the project comprises a database that can be used downstream of large-scale metagenomic taxonomic analyses, allowing one to interpret and explore their taxonomic classifications to have a deeper understanding of the microbial ecosystem they are studying. Such characteristics include, but are not limited to: optimal pH, optimal temperature, Gram stain, biofilm-formation, spore-formation, antimicrobial resistance, and COGEM class risk rating. The database has been manually curated by trained student-researchers from Weill Cornell Medicine and CUNY—Hunter College, and its analysis remains an ongoing effort with open-source capabilities so others can contribute. Available in SQL, JSON, and CSV (i.e. Excel) formats, the Microbe Directory can be queried for the aforementioned parameters by a microorganism’s taxonomy. In addition to the raw database, The Microbe Directory has an online counterpart ( https://microbe.directory/) that provides a user-friendly interface for storage, retrieval, and analysis into which other microbial database projects could be incorporated. The Microbe Directory was primarily designed to serve as a resource for researchers conducting metagenomic analyses, but its online web interface should also prove useful to any individual who wishes to learn more about any particular microbe. PMID:29630066

Infestation of the human kidney with Dioctophyma renale.

Science.gov (United States)

Ignjatovic, Ivan; Stojkovic, Ivica; Kutlesic, Cedo; Tasic, Suzana

2003-01-01

Human infestation with Dioctophyma renale is presented. Clinical signs and diagnostic findings are unspecific. They are discussed and a conservative therapeutic approach is suggested. Copyright 2003 S. Karger AG, Basel

Ectoparasitic infestation of dogs in Bendel State, Nigeria.

Science.gov (United States)

Ugochukwu, E I; Nnadozie, C C

1985-12-01

An investigation into ectoparasitic infestation of different breeds of dogs presented to four veterinary clinics in Benin, Sapele and Auchi in Bendel State of Nigeria during the period January 1983 to December 1983 is presented. Of a total of 820 dogs examined for ectoparasites 246 (30.00%) were infected by ticks, 226 (27.56%) by lice, 212 (25.85%) by fleas and 109 (13.29%) by mites. The species of ectoparasites identified and their prevalence rates were Rhipicephalus sanguineus (19.5%), Otobius megnini (10.48%), Ctenocephalides canis (25.85%), Demodex canis (13.29%). Common clinical symptoms evinced in this species include scratching, licking, irritation, restlessness, alopecia, otitis externa and dermatitis. Some aspects of epidemiology of canine ectoparasitic infestation are discussed.

Infestation by pyrethroids resistant bed bugs in the suburb of Paris, France

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Durand R.

2012-11-01

Full Text Available Bed bugs are hematophagous insects responsible for a re-emerging and challenging indoor pest in many countries. Bed bugs infestations may have health consequences including nuisance biting, cutaneous and systemic reactions. This resurgence can probably be attributed to factors such as increased international travel and development of resistance against insecticides. Resistance against pyrethroids has been reported several times from the USA and rarely in Europe. In France, very few data on bed bugs are available. The present study aimed to assess the infestation by bed bugs of a complex of two high-rise apartment buildings in the suburb of Paris and to evaluate their susceptibility to pyrethroid insecticides. We inspected for bed bugs 192 out of 198 apartments units (97% and interviewed their residents. 76 (39.6% apartments were infested. Among the 97 residents living in infested apartments, 53 (54.6% reported bed bug bites. A total of 564 bed bugs were collected in the infested units. Bioassays showed that 54 out of 143 bed bugs were resistant to pyrethroids (37.8%; 95% confidence interval: 29.9-45.7%. DNA sequencing showed that all bed bugs tested (n = 124 had homozygous L925I kdr-like gene mutation. The level of pyrethroid resistance found indicates that this phenomenon was already established in the site and prompts the need to reevaluate the wide use of pyrethroids to control bed bugs.

A metasystem of framework model organisms to study emergence of new host-microbe adaptations.

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Gopalan, Suresh; Ausubel, Frederick M

2008-01-01

An unintended consequence of global industrialization and associated societal rearrangements is new interactions of microbes and potential hosts (especially mammals and plants), providing an opportunity for the rapid emergence of host-microbe adaptation and eventual establishment of new microbe-related diseases. We describe a new model system comprising the model plant Arabidopsis thaliana and several microbes, each representing different modes of interaction, to study such "maladaptations". The model microbes include human and agricultural pathogens and microbes that are commonly considered innocuous. The system has a large knowledge base corresponding to each component organism and is amenable to high-throughput automation assisted perturbation screens for identifying components that modulate host-pathogen interactions. This would aid in the study of emergence and progression of host-microbe maladaptations in a controlled environment.

Effects of salicylic acid elicitor against aphids on wheat and detection of infestation using infrared thermal imaging technique in Ismailia, Egypt

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Mahmoud Farag Mahmoud

2015-04-01

Full Text Available Wheat (Triticum sativum L. is one of the most important cereal crops in Egypt. Insect pests, such as aphids, are major threats in terms of yield reduction. Induced resistance in wheat using salicylic acid as a foliar application was tested on the farm of the Faculty of Agriculture, Suez Canal University during 2012/2013 and 2013/2014 seasons. Three wheat cultivars, Gemeza 9, Sakha 93 and Giza 168, were sprayed three times with two concentrations of salicylic acid (SA, 200 mg/l and 100 mg/l, after early detection of aphid infestation by infrared thermal imaging. The infrared thermal imaging technique is based on significant differences in surface temperature between infested and healthy leaves. Imaging data are digital, and a computer program can be used to detect infestation rapidly. The results showed that aphid infestation raised the temperature of infested leaves, compared to healthy leaves. The range temperature difference between maximum and minimum temperatures (At was 1.1 ºC in healthy leaves and 3.9 ºC in infected leaves. The results of SA application showed significant differences in the mean number of aphids and in reduction of infestation among treatments and cultivars. The higher of the two SA rates (200 mg/l gave higher efficacy in the three cultivars than the lower rate (100 mg/l over the five weeks of trial. The highest efficacy against aphids was reached one week after application (86.28% for Giza, 85.89% for Gemesa and 70.54% for Sakha. Moreover, SA treatment enhanced the wheat yield of all three cultivars, compared with control plants. The three cultivars (Giza, Gemesa and Sakha produced higher yields than the control when sprayed with 200 mg/l SA. Their grain yield was 2,491.5, 2,455.0, and 2,327.25 kg/feddan (1 fed = 0.42 ha, respectively. In conclusion, infrared thermal imaging can be employed in identification of infected leaves. Also, the application of SA on wheat induced plant resistance to aphids.

Infestation of Raoiella indica Hirst (Trombidiformes: Tenuipalpidae) on Host Plants of High Socio-Economic Importance for Tropical America.

Science.gov (United States)

Otero-Colina, G; González-Gómez, R; Martínez-Bolaños, L; Otero-Prevost, L G; López-Buenfil, J A; Escobedo-Graciamedrano, R M

2016-06-01

The mite Raoiella indica Hirst was recently introduced into America, where it has shown amazing ability to disseminate and broaden its range of hosts. An experiment was conducted in Cancún, Mexico, to determine infestation levels of this mite on plants recorded as hosts: coconut palm (Cocos nucifera) of cultivars Pacific Tall and Malayan Dwarf, oil palm (Elaeis guineensis) hybrids Deli x Ghana and Deli x Nigeria, Dwarf Giant banana (Musa acuminata, AAA subgroup Cavendish), Horn plantain (M. acuminata x Musa balbisiana, AAB subgroup Plantain), lobster claw (Heliconia bihai), and red ginger (Alpinia purpurata). Nursery plants of these host species or cultivars were artificially infested with R. indica in February 2011. In the four replications of 10 plants, each plant was infested with 200 R. indica specimens, and the numbers of infesting mites were recorded for 6 months. A maximum of 18,000 specimens per plant were observed on coconut Pacific Tall and Malayan Dwarf, followed by lobster claw, with a maximum of 1000 specimens per plant. Infestations were minimal for the remaining plants. Mite numbers on all plants declined naturally during the rainy season. All plant materials sustained overlapping mite generations, indicating that they are true hosts. Complementarily, infestation level was determined in backyard bananas and plantains. Correlations of infestation with plant height, distance from coconuts, and exposure to direct sunlight were estimated. Both bananas and plantains were infested by R. indica even when situated far from infested coconut palms. A Spearman correlation was found between infestation and plant height, although it was significant only for Silk plantain.

The high life: Transport of microbes in the atmosphere

Science.gov (United States)

Smith, David J.; Griffin, Dale W.; Jaffe, Daniel A.

2011-07-01

Microbes (bacteria, fungi, algae, and viruses) are the most successful types of life on Earth because of their ability to adapt to new environments, reproduce quickly, and disperse globally. Dispersal occurs through a number of vectors, such as migrating animals or the hydrological cycle, but transport by wind may be the most common way microbes spread. General awareness of airborne microbes predates the science of microbiology. People took advantage of wild airborne yeasts to cultivate lighter, more desirable bread as far back as ancient Egypt by simply leaving a mixture of grain and liquids near an open window. In 1862, Louis Pasteur's quest to disprove spontaneous generation resulted in the discovery that microbes were actually single-celled, living creatures, prevalent in the environment and easily killed with heat (pasteurization). His rudimentary experiments determined that any nutrient medium left open to the air would eventually teem with microbial life because of free-floating, colonizing cells. The same can happen in a kitchen: Opportunistic fungal and bacterial cells cause food items exposed to the air to eventually spoil.

Microbe-associated molecular pattern (MAMP) signatures, synergy, size and charge

DEFF Research Database (Denmark)

Aslam, Shazia N.; Erbs, Gitte; Morrissey, Kate L.

2009-01-01

Triggering of defences by microbes has mainly been investigated using single elicitors or microbe-associated molecular patterns (MAMPs), but MAMPs are released in planta as complex mixtures together with endogenous oligogalacturonan (OGA) elicitor. We investigated the early responses in Arabidops...

Turning the table: plants consume microbes as a source of nutrients.

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Chanyarat Paungfoo-Lonhienne

Full Text Available Interactions between plants and microbes in soil, the final frontier of ecology, determine the availability of nutrients to plants and thereby primary production of terrestrial ecosystems. Nutrient cycling in soils is considered a battle between autotrophs and heterotrophs in which the latter usually outcompete the former, although recent studies have questioned the unconditional reign of microbes on nutrient cycles and the plants' dependence on microbes for breakdown of organic matter. Here we present evidence indicative of a more active role of plants in nutrient cycling than currently considered. Using fluorescent-labeled non-pathogenic and non-symbiotic strains of a bacterium and a fungus (Escherichia coli and Saccharomyces cerevisiae, respectively, we demonstrate that microbes enter root cells and are subsequently digested to release nitrogen that is used in shoots. Extensive modifications of root cell walls, as substantiated by cell wall outgrowth and induction of genes encoding cell wall synthesizing, loosening and degrading enzymes, may facilitate the uptake of microbes into root cells. Our study provides further evidence that the autotrophy of plants has a heterotrophic constituent which could explain the presence of root-inhabiting microbes of unknown ecological function. Our discovery has implications for soil ecology and applications including future sustainable agriculture with efficient nutrient cycles.

A previously unidentified Chorioptes species infesting outer ear canals of moose (Alces alces: characterization of the mite and the pathology of infestation

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Mattsson Roland

2007-09-01

Full Text Available Abstract Background During the past decade, Chorioptes mites occupying the outer ear canals have been a common finding at routine necropsies of moose (Alces alces in Sweden, but neither the taxonomy of the mites nor lesions from the infestation have been investigated. In this study, the mites are characterized by morphological and molecular techniques, and the histopathology of the skin of the outer ear canal is described. Methods External auditory meatuses from 53 necropsied moose were examined for the presence of Chorioptes, and samples from outer ear canals were taken for histopathological and microbiological examination. A proportion of the mites from each moose was identified to species. The DNA was extracted from mites from three moose, and their ITS-2 sequences were determined; these sequences were compared phylogenetically to sequences from other Chorioptes taxa. Results Chorioptes mites were found in 43 (81% of the 53 moose. The mites had morphological and genetic characteristics distinct from those of C. texanus and C. bovis, the two species generally accepted within the genus. Morphology also did not argue for a diagnosis as C. crewei, C. mydaus or C. panda. On histopathology, lesions were characterized by a hyperplastic perivascular to interstitial dermatitis with epidermal hyperkeratosis and crust formation. Dermal inflammatory infiltrates were composed of mixed T- and B-lymphocytes, plasma cells and macrophages, whereas eosinophils were notably uncommon. Staphylococcus aureus was grown from the infested epidermis of five of 14 examined moose. Conclusion Chorioptes mite infestation was frequently detected in the outer ear canals of moose in Sweden. The mites were evidently pathogenic, being associated with inflammatory lesions of the external auditory meatus. Our studies indicate infestations with a previously undescribed Chorioptes species.

Enrichment of degrading microbes and bioremediation of petrochemical contaminants in polluted soil

International Nuclear Information System (INIS)

Li, G.; Huang, W.; Zhang, X.; Lerner, D.N.

2000-01-01

Soil at a site near Zibo City, China, is polluted with hydrocarbons at concentrations up to 200 g kg -1 dry soil. Samples contained 10 7 microbial cells g -1 dry soil, and the concentration of aerobic degradation bacteria is 10 7 cells g -1 dry soil. The most active species were Xanthomonas, Bacillus and Hyphomicrobium. The nitrogen and phosphorus contents of the polluted soil are typically 0.1 %, and are sufficient to sustain natural or enhanced biodegradation. The BAC (Biological Activated Carbon) system was used to enrich indigenous microbes to enhance bioremediation rates in the laboratory. The BAC used the large surface area and sorption characteristics to fix bacteria and media, and effectively culture and enrich the microbes. Effluent from the BAC system contained up to 4 x 10 11 cells ml -1 , and was introduced to the contaminated soil to enhance biodegradation. The results indicated that the natural biodegradation rate of the petroleum hydrocarbons is lower than the BAC enhanced bioremediation rate, 1.7% as opposed to 42% in 32 days. (Author)

Hematology and serum biochemistry in debilitated, free-ranging raccoon dogs (Nyctereutes procyonoides) infested with sarcoptic mange.

Science.gov (United States)

Kido, Nobuhide; Kamegaya, Chihiro; Omiya, Tomoko; Wada, Yuko; Takahashi, Maya; Yamamoto, Yasuhiko

2011-12-01

Frequent outbreaks of Sarcoptes scabiei infestation in raccoon dogs (Nyctereutes procyonoides) have been reported in Japan. Although many raccoon dogs are brought to Kanazawa Zoological Garden (Yokohama, Kanagawa, Japan) because of S. scabiei infestation and debilitation, some of them die of asthenia. The clinical status of severely debilitated raccoon dogs must be determined to save their lives. In this study, we compared hematological and serum biochemical values between severely debilitated and nondebilitated raccoon dogs infested with S. scabiei. The total protein, albumin, glucose, and calcium values of debilitated raccoon dogs were significantly lower than those of nondebilitated raccoon dogs. On the other hand, debilitated raccoon dogs had significantly higher aspartate aminotransferase, total bilirubin, blood urea nitrogen, sodium, chloride, and phosphorus values than did nondebilitated raccoon dogs. The increase in the blood urea nitrogen value was particularly dramatic. The present study revealed that debilitated raccoon dogs infested with S. scabiei exhibited abnormal hematological values compared with nondebilitated raccoon dogs infested with S. scabiei. Clinically, the raccoon dogs developed malnutrition and sepsis if the mange infestation was untreated. Moreover, dehydration associated with appetite loss may have resulted in insufficient renal perfusion. These findings suggest that chronic S. scabiei infestations debilitated the raccoon dogs and resulted in physiological changes that were detected with hematological and serum biochemical tests. Copyright © 2011 Elsevier Ireland Ltd. All rights reserved.

The ``Adopt A Microbe'' project: Web-based interactive education connected with scientific ocean drilling

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Orcutt, B. N.; Bowman, D.; Turner, A.; Inderbitzen, K. E.; Fisher, A. T.; Peart, L. W.; Iodp Expedition 327 Shipboard Party

2010-12-01

We launched the "Adopt a Microbe" project as part of Integrated Ocean Drilling Program (IODP) Expedition 327 in Summer 2010. This eight-week-long education and outreach effort was run by shipboard scientists and educators from the research vessel JOIDES Resolution, using a web site (https://sites.google.com/site/adoptamicrobe) to engage students of all ages in an exploration of the deep biosphere inhabiting the upper ocean crust. Participants were initially introduced to a cast of microbes (residing within an ‘Adoption Center’ on the project website) that live in the dark ocean and asked to select and virtually ‘adopt’ a microbe. A new educational activity was offered each week to encourage learning about microbiology, using the adopted microbe as a focal point. Activities included reading information and asking questions about the adopted microbes (with subsequent responses from shipboard scientists), writing haiku about the adopted microbes, making balloon and fabric models of the adopted microbes, answering math questions related to the study of microbes in the ocean, growing cultures of microbes, and examining the gases produced by microbes. In addition, the website featured regular text, photo and video updates about the science of the expedition using a toy microbe as narrator, as well as stories written by shipboard scientists from the perspective of deep ocean microbes accompanied by watercolor illustrations prepared by a shipboard artist. Assessment methods for evaluating the effectiveness of the Adopt a Microbe project included participant feedback via email and online surveys, website traffic monitoring, and online video viewing rates. Quantitative metrics suggest that the “Adope A Microbe” project was successful in reaching target audiences and helping to encourage and maintain interest in topics related to IODP Expedition 327. The “Adopt A Microbe” project mdel can be adapted for future oceanographic expeditions to help connect the

An ultrasonic method for separation of epiphytic microbes from freshwater submerged macrophytes.

Science.gov (United States)

Cai, Xianlei; Gao, Guang; Yang, Jing; Tang, Xiangming; Dai, Jiangyu; Chen, Dan; Song, Yuzhi

2014-07-01

Epiphytic microbes are common inhabitants of freshwater submerged macrophytes, which play an important role in aquatic ecosystems. An important precondition for studying the epiphytic microbes is having an effective method of separating the attached microbes from the host macrophytes. We developed an ultrasound-based method for separating epiphytic microbes from freshwater submerged macrophytes, optimized the conditions of ultrasonic separation with an orthogonal experimental design, and compared the optimized ultrasonic method with manual separation. This method can be particularly useful for freshwater submerged macrophytes having a complex morphology. © 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Delusional infestation is typically comorbid with other psychiatric diagnoses: review of 54 patients receiving psychiatric evaluation at Mayo Clinic.

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Hylwa, Sara A; Foster, Ashley A; Bury, Jessica E; Davis, Mark D P; Pittelkow, Mark R; Bostwick, J Michael

2012-01-01

Delusional infestation, which encompasses both delusions of parasitosis and delusions of infestation with inanimate objects (sometimes called Morgellons disease), has been said to represent a distinct and encapsulated delusion, that is, a stand-alone diagnosis. Anecdotally, we have observed that patients with delusional infestation often have one or more psychiatric comorbid conditions and that delusional infestation should not be regarded as a stand-alone diagnosis. The purpose of this study was to identify whether patients with delusional infestation have psychiatric comorbid conditions. We therefore identified patients who had been formally evaluated in the Department of Psychiatry during their visit to Mayo Clinic. We retrospectively searched for and reviewed the cases of all patients with delusional infestation seen from 2001 through 2007 at Mayo Clinic, Rochester, Minnesota, and who underwent psychiatric evaluation. The diagnoses resulting from psychiatric evaluation were analyzed. During the 7-year study period, 109 patients seen for delusional infestation at Mayo Clinic were referred to the Department of Psychiatry, 54 (50%) of whom actually followed through with psychiatric consultation. Of these 54 patients, 40 (74%) received additional active psychiatric diagnoses; 14 patients (26%) had delusional infestation alone. Abnormal personality traits were rarely documented. Most patients with delusional infestation have multiple coexisting or underlying psychiatric disorders. Therefore, evaluation by a psychiatrist, when possible, is advised for all patients with delusional infestation. Copyright © 2012 The Academy of Psychosomatic Medicine. Published by Elsevier Inc. All rights reserved.

Anti-radiation microbe separated from traditional Chinese medicine

International Nuclear Information System (INIS)

Zou Zhaohui; Zhao Junqi; Deng Gangqiao; Wang Qian; Li Wenge; Peng Ling; Luo Zhiping

2007-01-01

One batch of Jinsuo pills, a kind of Chinese herbal medicine, treated by standardized irradiation process but failed to meet the sanitation requirement. Radiation resistant microbe was separated from the pills sample and the Gram stain showed positive, the colony of the microbe is milky white and concentric circle shape. It is observed as one of bacillus by microscope, its D 10 values in physiological saline and filter paper are 6.75 and 7.18 kGy, respectively. (authors)

TANPOPO: Microbe and micrometeoroid capture experiments on International Space Station.

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Yamagishi, Akihiko; Kobayashi, Kensei; Yano, Hajime; Yokobori, Shinichi; Hashimoto, Hirofumi; Kawai, Hideyuki; Yamashita, Masamichi

There is a long history of the microbe-collection experiments at high altitude. Microbes have been collected using balloons, aircraft and meteorological rockets from 1936 to 1976. Spore forming fungi and Bacilli, and Micrococci have been isolated in these experiments. It is not clear how high do microbes go up. If the microbes might have been present even at higher altitudes, the fact would endorse the possibility of interplanetary migration of life. TANPOPO, dandelion, is the name of a grass whose seeds with floss are spread by the wind. We propose the analyses of interplanetary migration of microbes, organic compounds and meteoroids on Japan Experimental Module (JEM) of the International Space Station (ISS). Ultra low-density aerogel will be used to capture micrometeoroid and debris. Particles captured by aerogel will be used for several analyses after the initial inspection of the gel and tracks. Careful analysis of the tracks in the aerogel will provide the size and velocity dependence of debris flux. The particles will be analyzed for mineralogical, organic and microbiological characteristics. Aerogels are ready for production in Japan. Aerogels and trays are space proven. All the analytical techniques are ready. The Tanpopo mission was accepted as a candidate experiments on Exposed Facility of ISS-JEM.

Infestation of froghopper nymphs changes the amounts of total phenolics in sugarcane

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Silva Rafael José Navas da

2005-01-01

Full Text Available The increased rate of sugarcane harvest without previous burn has provided a very favorable environment to the froghopper Mahanarva fimbriolata (Stal, 1854, with high moisture and low temperature variation. Few works have studied the response of sugarcane to this pest, so little is known about resistant cultivars. Plant phenolics are widely studied compounds because of their known antiherbivore effect. This research aims to determine if the attack of M. fimbriolata nymphs stimulates the accumulation of total phenolics in sugarcane. The experiment was carried out in greenhouse and arranged in completely randomized design, in a 3 X 2 X 4 factorial with three replications. Second instar nymphs of M. fimbriolata were infested at the following rates: control, 2-4 and 4-8 nymphs per pot (first-second infestations, respectively. Pots were covered with nylon net and monitored daily to isolate the effect of leaf sucking adults. Leaf and root samples were collected and kept frozen in liquid nitrogen until analyses. Infested plants showed higher levels of phenolics in both root and leaf tissues. In roots, the cultivar SP80-1816 accumulated more phenolic compounds in response to the infestation of M. fimbriolata. On the other hand, higher levels were found in leaves and roots of control plants of SP86-42, which might be an indication of a non-preference mechanism. The increase of total phenolics in sugarcane infested with root-sucking froghopper nymphs does not seem to be useful to detect the resistance to this pest.

Evaluation of the relationship between androgenetic alopecia and demodex infestation

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Zari Javidi

2008-01-01

Full Text Available Introduction: Androgenetic alopecia (AGA is one of the most common dermatologic disorders with a multifactorial etiology. Inflammatory activators such as Demodex infestation may play a role in the pathogenesis of some cases of androgenetic alopecia that do not respond to common treatments such as minoxidil and finasteride. The goal of this study is to evaluate the relationship between Demodex infestation and AGA. Materials and Methods: In this case-control study, 41 patients with AGA referred to the Dermatology Clinic of Imam Reza Hospital and 33 healthy individuals were evaluated as control. All of them were between 20 and 40 years old men. In order to identify Demodex infestation they were referred to the Parasitology laboratory. Results: Demodex was detected in 19.5% of patients and 15.2% of controls; therefore, there was no significant relationship between them statistically ( P = 0.0787. Most of patients (85.4% had greasy hair. The most common pattern of baldness was II degree in Hamilton scale. Conclusion: There is no relation between AGA and Demodex.

Biogeographical diversity of plant associated microbes in arcto-alpine plants

NARCIS (Netherlands)

Kumar, Manoj Gopala Krishnan

2016-01-01

Terrestrial plants and microbes have co-evolved since the emergence of the former on Earth. Associations with microorganisms can be either beneficial or detrimental for plants. Microbes can be found in the soil surrounding the plant roots, but also in all plant tissues, including seeds. In

Arsenic mineral dissolution and possible mobilization in mineral-microbe-groundwater environment.

Science.gov (United States)

Islam, A B M R; Maity, Jyoti Prakash; Bundschuh, Jochen; Chen, Chien-Yen; Bhowmik, Bejon Kumar; Tazaki, Kazue

2013-11-15

Arsenic (As) is widely distributed in the nature as ores or minerals. It has been attracted much attention for the global public health issue, especially for groundwater As contamination. The aim of this study was to elucidate the characteristics of microbes in groundwater where As-minerals were dissolved. An ex situ experiment was conducted with 7 standard As-minerals in bacteria-free groundwater and stored in experimental vessels for 1 year without supplementary nutrients. The pH (6.7-8.4) and EhS.H.E. (24-548 mV) changed between initial (0 day) and final stages (365 days) of experiment. The dissolution of As was detected higher from arsenolite (4240 ± 8.69 mg/L) and native arsenic (4538 ± 9.02 mg/L), whereas moderately dissolved from orpiment (653 ± 3.56 mg/L) and realgar (319 ± 2.56 mg/L) in compare to arsenopyrite (85 ± 1.25mg/L) and tennantite (3 ± 0.06 mg/L). Optical microscopic, scanning electron microscopic observations and flurometric enumeration revealed the abundance of As-resistant bacillus, coccus and filamentous types of microorganisms on the surface of most of As-mineral. 4'-6-Diamidino-2-phenylindole (DAPI)-stained epifluorescence micrograph confirmed the presence of DNA and carboxyfluorescein diacetate (CFDA) staining method revealed the enzymatically active bacteria on the surface of As-minerals such as in realgar (As4S4). Therefore, the microbes enable to survive and mobilize the As in groundwater by dissolution/bioweathering of As-minerals. Copyright © 2012. Published by Elsevier B.V.

Harnessing Insect-Microbe Chemical Communications To Control Insect Pests of Agricultural Systems.

Science.gov (United States)

Beck, John J; Vannette, Rachel L

2017-01-11

Insect pests cause serious economic, yield, and food safety problems to managed crops worldwide. Compounding these problems, insect pests often vector pathogenic or toxigenic microbes to plants. Previous work has considered plant-insect and plant-microbe interactions separately. Although insects are well-understood to use plant volatiles to locate hosts, microorganisms can produce distinct and abundant volatile compounds that in some cases strongly attract insects. In this paper, we focus on the microbial contribution to plant volatile blends, highlighting the compounds emitted and the potential for variation in microbial emission. We suggest that these aspects of microbial volatile emission may make these compounds ideal for use in agricultural applications, as they may be more specific or enhance methods currently used in insect control or monitoring. Our survey of microbial volatiles in insect-plant interactions suggests that these emissions not only signal host suitability but may indicate a distinctive time frame for optimal conditions for both insect and microbe. Exploitation of these host-specific microbe semiochemicals may provide important microbe- and host-based attractants and a basis for future plant-insect-microbe chemical ecology investigations.

Norwegian honey bees surviving Varroa destructor mite infestations by means of natural selection.

Science.gov (United States)

Oddie, Melissa A Y; Dahle, Bjørn; Neumann, Peter

2017-01-01

Managed, feral and wild populations of European honey bee subspecies, Apis mellifera , are currently facing severe colony losses globally. There is consensus that the ectoparasitic mite Varroa destructor , that switched hosts from the Eastern honey bee Apis cerana to the Western honey bee A. mellifera , is a key factor driving these losses. For >20 years, breeding efforts have not produced European honey bee colonies that can survive infestations without the need for mite control. However, at least three populations of European honey bees have developed this ability by means of natural selection and have been surviving for >10 years without mite treatments. Reduced mite reproductive success has been suggested as a key factor explaining this natural survival. Here, we report a managed A. mellifera population in Norway, that has been naturally surviving consistent V. destructor infestations for >17 years. Surviving colonies and local susceptible controls were evaluated for mite infestation levels, mite reproductive success and two potential mechanisms explaining colony survival: grooming of adult worker bees and Varroa Sensitive Hygiene (VSH): adult workers specifically detecting and removing mite-infested brood. Mite infestation levels were significantly lower in surviving colonies and mite reproductive success was reduced by 30% when compared to the controls. No significant differences were found between surviving and control colonies for either grooming or VSH. Our data confirm that reduced mite reproductive success seems to be a key factor for natural survival of infested A. mellifera colonies. However, neither grooming nor VSH seem to explain colony survival. Instead, other behaviors of the adult bees seem to be sufficient to hinder mite reproductive success, because brood for this experiment was taken from susceptible donor colonies only. To mitigate the global impact of V. destructor , we suggest learning more from nature, i.e., identifying the obviously

Norwegian honey bees surviving Varroa destructor mite infestations by means of natural selection

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Melissa A.Y. Oddie

2017-10-01

Full Text Available Background Managed, feral and wild populations of European honey bee subspecies, Apis mellifera, are currently facing severe colony losses globally. There is consensus that the ectoparasitic mite Varroa destructor, that switched hosts from the Eastern honey bee Apis cerana to the Western honey bee A. mellifera, is a key factor driving these losses. For >20 years, breeding efforts have not produced European honey bee colonies that can survive infestations without the need for mite control. However, at least three populations of European honey bees have developed this ability by means of natural selection and have been surviving for >10 years without mite treatments. Reduced mite reproductive success has been suggested as a key factor explaining this natural survival. Here, we report a managed A. mellifera population in Norway, that has been naturally surviving consistent V. destructor infestations for >17 years. Methods Surviving colonies and local susceptible controls were evaluated for mite infestation levels, mite reproductive success and two potential mechanisms explaining colony survival: grooming of adult worker bees and Varroa Sensitive Hygiene (VSH: adult workers specifically detecting and removing mite-infested brood. Results Mite infestation levels were significantly lower in surviving colonies and mite reproductive success was reduced by 30% when compared to the controls. No significant differences were found between surviving and control colonies for either grooming or VSH. Discussion Our data confirm that reduced mite reproductive success seems to be a key factor for natural survival of infested A. mellifera colonies. However, neither grooming nor VSH seem to explain colony survival. Instead, other behaviors of the adult bees seem to be sufficient to hinder mite reproductive success, because brood for this experiment was taken from susceptible donor colonies only. To mitigate the global impact of V. destructor, we suggest learning

Community structures and activity of denitrifying microbes in a forested catchment in central Japan: survey using nitrite reductase genes

Science.gov (United States)

Ohte, N.; Aoki, M.; Katsuyama, C.; Suwa, Y.; Tange, T.

2012-12-01

To elucidate the mechanisms of denitrification processes in the forested catchment, microbial ecological approaches have been applied in an experimental watershed that has previously investigated its hydrological processes. The study catchment is located in the Chiba prefecture in central Japan under the temperate Asian monsoon climate. Potential activities of denitrification of soil samples were measured by incubation experiments under anoxic condition associated with Na15NO3 addition. Existence and variety of microbes having nitrite reductase genes were investigated by PCR amplification, cloning and sequencings of nirK and nirS fragments after DNA extraction. Contrary to our early expectation that the potential denitrification activity was higher at deeper soil horizon with consistent groundwater residence than that in the surface soil, denitrification potential was higher in shallower soil horizons than deeper soils. This suggested that the deficiency of NO3- as a respiratory substrate for denitrifier occurred in deeper soils especially in the summer. However, high denitrification activity and presence of microbes having nirK and nirS in surface soils usually under aerobic condition was explainable by the fact that the majority of denitrifying bacteria have been recognized as a facultative anaerobic bacterium. This also suggests the possibility of that denitrification occurs even in the surface soils if the wet condition is provided by rainwater during and after a storm event. Community structures of microbes having nirK were different between near surface and deeper soil horizons, and ones having nirS was different between saturated zone (under groundwater table) and unsaturated soil horizons. These imply that microbial communities with nisK are sensitive to the concentration of soil organic matters and ones with nirS is sensitive to soil moisture contents.

Parasitic castration, growth, and sex steroids in the freshwater bonefish Cyphocharax gilbert (Curimatidae infested by Riggia paranensis (Cymothoidea

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Neuza R. W. Lima

Full Text Available Cyphocharax gilbert shows parasitic castration when infested by the crustacean Riggia paranensis, being unable to reproduce. Fish were sampled in the middle rio Itabapoana, Brazil, to study the prevalence of parasitism, growth, and sex steroid concentrations, considering the body size, sex, and reproductive condition of specimens. Most of the fish analyzed were infested (56.0%. The presence of two lines on the scales was more frequent among infested fish (22.0% than among fish without parasites (12.0% for females and 10.0% for males. The occurrence of three lines on the scales was rare (3.5% among infested and 2.0% among females without parasites. These results suggest that growth of the host is faster than that of non infested fish. The serum concentrations of sex steroids from fish without parasites varied at different gonadal development stages (17 beta-estradiol: 60.0 to 976.7 pg/ml; total testosterone: 220.0 to 3,887.7 pg/ml. All infested fish had lower levels of the two sex steroids and undeveloped gonads. Sex steroids levels in infested females were close to those in females at post-spawning stages. Total testosterone concentrations of infested males were below those of males at early gonadal maturation stage. These results suggest that R. paranensis reduces the reproductive capacity of C. gilbert by affecting the host endocrine system.

Towards a systems understanding of plant-microbe interactions

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Akira eMine

2014-08-01

Full Text Available Plants are closely associated with microorganisms including pathogens and mutualists that influence plant fitness. Molecular genetic approaches have uncovered a number of signaling components from both plants and microbes and their mode of actions. However, signaling pathways are highly interconnected and influenced by diverse sets of environmental factors. Therefore, it is important to have systems views in order to understand the true nature of plant-microbe interactions. Indeed, systems biology approaches have revealed previously overlooked or misinterpreted properties of the plant immune signaling network. Experimental reconstruction of biological networks using exhaustive combinatorial mutants is particularly powerful to elucidate network structure and properties and relationships among network components. Recent advances in metagenomics of microbial communities associated with plants further point to the importance of systems approaches and open a research area of microbial community reconstruction. In this review, we highlight the importance of a systems understanding of plant-microbe interactions, with a special emphasis on reconstruction strategies.

Histamine as an emergent indoor contaminant: Accumulation and persistence in bed bug infested homes.

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Zachary C DeVries

Full Text Available Histamine is used in bronchial and dermal provocation, but it is rarely considered an environmental risk factor in allergic disease. Because bed bugs defecate large amounts of histamine as a component of their aggregation pheromone, we sought to determine if histamine accumulates in household dust in bed bug infested homes, and the effects of bed bug eradication with spatial heat on histamine levels in dust. We collected dust in homes and analyzed for histamine before, and up to three months after bed bug eradication. Histamine levels in bed bug infested homes were remarkably high (mean = 54.6±18.9 μg/100 mg of sieved household dust and significantly higher than in control homes not infested with bed bugs (mean < 2.5±1.9 μg/100 mg of sieved household dust. Heat treatments that eradicated the bed bug infestations failed to reduce histamine levels, even three months after treatment. We report a clear association between histamine levels in household dust and bed bug infestations. The high concentrations, persistence, and proximity to humans during sleep suggest that bed bug-produced histamine may represent an emergent contaminant and pose a serious health risk in the indoor environment.

A study on Maruca vitrata infestation of Yard-long beans (Vigna unguiculata subspecies sesquipedalis

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R.C. Jayasinghe

2015-09-01

Full Text Available Globally, Maruca vitrata (Geyer is a serious yield constraint on food legumes including Yard-long bean (Vigna unguiculata subspecies sesquipedalis. However, there is a dearth of information on its damage potential, distribution and population dynamics in Yard-long beans. In the present study, the level of M. vitrata larval infestation on flowers and pods of Yard-long beans in Sri Lanka was determined with respect to three consecutive cropping seasons, Yala, Off and Maha. Results indicated that larval infestation and abundance varied with developmental stage of flowers and pods, cropping season and their combined interactive effects. Flowers of Yard-long beans were more prone to M. vitrata larval attack compared to pods. Abundance and level of infestation of M. vitrata varied with plant parts, having a ranking of flower buds (highest > open flowers > mature pods > immature pods (lowest. Peak infestation was observed six and eight weeks after planting on flowers and pods, respectively. Among the three cropping seasons, M. vitrata infestation was found to be higher during Maha and Off seasons compared to Yala. The findings of this study contribute to the identified knowledge gap regarding the field biology of an acknowledged important pest, M. vitrata, in a previously understudied crop in Sri Lanka.

Three-dimensional optofluidic device for isolating microbes

Science.gov (United States)

Keloth, A.; Paterson, L.; Markx, G. H.; Kar, A. K.

2015-03-01

Development of efficient methods for isolation and manipulation of microorganisms is essential to study unidentified and yet-to-be cultured microbes originating from a variety of environments. The discovery of novel microbes and their products have the potential to contribute to the development of new medicines and other industrially important bioactive compounds. In this paper we describe the design, fabrication and validation of an optofluidic device capable of redirecting microbes within a flow using optical forces. The device holds promise to enable the high throughput isolation of single microbes for downstream culture and analysis. Optofluidic devices are widely used in clinical research, cell biology and biomedical engineering as they are capable of performing analytical functions such as controlled transportation, compact and rapid processing of nanolitres to millilitres of clinical or biological samples. We have designed and fabricated a three dimensional optofluidic device to control and manipulate microorganisms within a microfluidic channel. The device was fabricated in fused silica by ultrafast laser inscription (ULI) followed by selective chemical etching. The unique three-dimensional capability of ULI is utilized to integrate microfluidic channels and waveguides within the same substrate. The main microfluidic channel in the device constitutes the path of the sample. Optical waveguides are fabricated at right angles to the main microfluidic channel. The potential of the optical scattering force to control and manipulate microorganisms is discussed in this paper. A 980 nm continuous wave (CW) laser source, coupled to the waveguide, is used to exert radiation pressure on the particle and particle migrations at different flow velocities are recorded. As a first demonstration, device functionality is validated using fluorescent microbeads and initial trials with microalgae are presented.

Spectral analysis of white ash response to emerald ash borer infestations

Science.gov (United States)

Calandra, Laura

The emerald ash borer (EAB) (Agrilus planipennis Fairmaire) is an invasive insect that has killed over 50 million ash trees in the US. The goal of this research was to establish a method to identify ash trees infested with EAB using remote sensing techniques at the leaf-level and tree crown level. First, a field-based study at the leaf-level used the range of spectral bands from the WorldView-2 sensor to determine if there was a significant difference between EAB-infested white ash (Fraxinus americana) and healthy leaves. Binary logistic regression models were developed using individual and combinations of wavelengths; the most successful model included 545 and 950 nm bands. The second half of this research employed imagery to identify healthy and EAB-infested trees, comparing pixel- and object-based methods by applying an unsupervised classification approach and a tree crown delineation algorithm, respectively. The pixel-based models attained the highest overall accuracies.

Weed infestation of crops in different soils in the protective zone of Roztocze National Park. Part I. Winter and spring cereals

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Marta Ziemińska-Smyk

2013-12-01

Full Text Available The study on weed infestation of crops in different soils in the protective zone of RPN was conducted in the years 1991-1995. The characterization of weed infestation of winter and spring cereals was based on 306 phytosociological records. made with the use of Braun-Blanquet method. The degree of weed infestation in the fields in the protective zone of RPN depended on environment conditions. Both winter and spring cereals in majority of soils were most infested by: Cenaturea cyanus, Apera spica-venti and Vicia hirsta. In the lightest podsolic soils, made of loose sand and slightly loamy sand. winter and spring cereals were additionally infested by Equisetum arvense and two acidophylic species: Seleranthus annuus and Spergula arvensis. The crops in brown loess soil were infested by Matricaria maritima subsp. inodora. The most difficult weed species in brown soil formed from gaizes and limestone soil were: Convolvulus arvensis, Papaver rhoeas and Galium aparine. Moreover winter cercals in limestone soil showed high or medium infestation with Consolida regalis, Aethusa cynapium, Lathyrus tuberosus and low infestation with Apera spica-venti and Centaurea cyanus. Spring cereals were less infested than winter cereals. Apera spica-venti and Centaurea cyanus were less common with spring cereals than with winter cereals. Also, spring cereals showed high or medium infestation with Convolvulus arvensis. Spring cereals in some soil units were infested by Chenopodium album and Stellaria media. There was also higher infestation of spring cereals in limestone soils with Avena fatua, Veronica persica, Sinapis arvensis and Sonchus arvensis, compared to winter cereals in limestone soils.

Severe water intoxication and secondary depressive syndrome in relation to delusional infestation

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Lai J

2016-02-01

Full Text Available Jianbo Lai,1 Qiaoqiao Lu,1 Yi Xu,1,2 Shaohua Hu1,2 1Department of Psychiatry, First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, People’s Republic of China; 2The Key Laboratory of Mental Disorder’s Management in Zhejiang Province, Hangzhou, People’s Republic of China Abstract: This study presents a case of severe water intoxication in a female patient with delusional infestation. Self-induced excessive water ingestion is a rare medical condition, which has not been reported in patients with delusional infestation yet. The patient in this case study was a 60-year-old Chinese woman, who was admitted to our hospital because of a feeling of skin infestation. She suffered from loss of consciousness and generalized tonic–clonic seizure after drinking 12 L of water during bowel cleansing before colonoscopy. Sufficient laboratory and imaging examinations were performed to exclude other possible causes of severe hyponatremia, such as hypothyroidism, diabetes insipidus, and syndrome of inappropriate antidiuretic hormone. Besides, the cystic lesion in the posterior pituitary revealed by cranial magnetic resonance imaging was not accountable for her delusional symptoms as well as excessive drinking behavior. Her delusional symptoms were in complete remission with a combination of risperidone and aripiprazole. However, nearly 3 months after discharge, this patient suffered from depressed mood and was diagnosed with depressive syndrome, and even attempted suicide. This case highlights the possibility of self-induced water intoxication in patients with delusional infestation, inevitably adding to the complexity of the disease, and indicates the necessity of precautions for secondary psychotic or mood problems after symptomatological remission. Keywords: delusional infestation, depressive syndrome, suicide, water intoxication

Evaluation on the effectiveness of actions for controlling infestation by rodents in Campo Limpo region, Sao Paulo Municipality, Brazil.

Science.gov (United States)

de Masi, Eduardo; Vilaça, Pedro José; Razzolini, Maria Tereza Pepe

2009-08-01

Rodents are responsible for the transmission of more than 60 diseases both to human beings and to domestic animals. The increase in rodent infestation in a given area brings several health problems to the nearby population. Thus, when infestation increases, it is time to take intervention measures. Although many countries have implemented programs aimed at controlling rodent infestation, literature on studies evaluating the effectiveness of intervention measures in urban areas is scarce. Aimed at contributing to the understanding of rodents' population dynamics in urban areas, the objective of this study was to evaluate the effectiveness of the control methods proposed by "Programa de Vigilancia e Controle de Roedores do Municipio de Sao Paulo" (Program for Rodents Surveillance and Control in Sao Paulo Municipality), conducted on Jardim Comercial District. As a first step, a survey to assess infestation rates was conducted in 1529 dwellings located in the area studied. After that, a chemical control upon rodents was accomplished in every dwelling infested. One week and six months after completion of control measures, a new evaluation on infestation rates was carried out, in order to verify the effectiveness of the procedures taken and to estimate the re-infestation capacity. Initial infestation rate was 40.0%, and the final infestation rate, 14.4%. Therefore, the effectiveness of the control methods utilized was 63.8%. It can thus be concluded that the control methods applied were quite effective.

A Molecular Study of Microbe Transfer between Distant Environments

OpenAIRE

Hooper, Sean D.; Raes, Jeroen; Foerstner, Konrad U.; Harrington, Eoghan D.; Dalevi, Daniel; Bork, Peer

2008-01-01

BACKGROUND: Environments and their organic content are generally not static and isolated, but in a constant state of exchange and interaction with each other. Through physical or biological processes, organisms, especially microbes, may be transferred between environments whose characteristics may be quite different. The transferred microbes may not survive in their new environment, but their DNA will be deposited. In this study, we compare two environmental sequencing projects to find molecu...

One-Humped Camels (Camelus dromedaries Hard Ticks Infestation in Qeshm Island, Iran

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Saeed Nazifi

2011-06-01

Full Text Available The economic importance of tick infestation on camels are important as they are important meat and milk producer animals in the less vegetation area of Iran and their health and production are greatly affected by the high tick infestation. In this investigation, tick infestations on camels (Camelus dromedarius were determined in Qeshm Island, Iran. A total number of 912 adult ticks (472 males and 440 females were collected and identified. Hyalomma dromedarii was the predominant tick specie and accounted for 61.9% of the adult ticks. Other hard ticks were H. anatolicum excavatum (22 %, H. asiaticum asiaticum (14.2 %, H. marginatum (1.9 %, H. impeltatum (0.4 % and Ripicephalus bursa (0.4 %. In conclusion, The provision of tick control programs in the Qeshm Island would seem a prerequisite for improving camel meat and milk production.

Recognition of mite-infested brood by honeybee (Apis mellifera) workers may involve thermal sensing.

Science.gov (United States)

Bauer, Daniel; Wegener, Jakob; Bienefeld, Kaspar

2018-05-01

Hygienic behavior, i.e. the removal of diseased or damaged brood by worker honey bees (Apis mellifera), is seen as one of the principal behavioral elements of this species' social immunity. Identification of the stimuli that trigger it would be helpful in searching for biochemical and molecular markers of this important breeding trait. While many studies at the genomic, transcriptomic, and behavioral level have pointed to the implication of chemical cues, we here hypothesized that thermal cues are alternatively/additionally involved. To test this hypothesis, we first measured whether infestation by the mite Varroa destructor (a condition known to induce hygienic behavior) leads to a thermal gradient between affected and unaffected brood. We found that infested brood cells were between 0.03 and 0.19 °C warmer than uninfested controls. Next, we tested whether artificially heating an area of a brood comb would increase the removal of infested or uninfested brood as compared to an unheated control area, and found that this was not the case. Finally, we investigated whether the heating of individual brood cells, as opposed to comb areas, would influence brood removal from cells adjacent to the heated one. This was the case for uninfested, though not for infested cells. We conclude that infestation by V. destructor leads to a heating of brood cells that should be perceivable by bees, and that small-scale temperature gradients can influence brood removal. This makes it appear possible that thermal cues play a role in triggering hygienic behavior of honey bees directed at varroa-infested larvae/pupae, although our results are insufficient to prove such an involvement. Copyright © 2018. Published by Elsevier Ltd.

Life under the Microscope: Children's Ideas about Microbes

Science.gov (United States)

Allen, Michael; Bridle, Georgina; Briten, Elizabeth

2015-01-01

Microbes (by definition) are tiny living things that are only visible through a microscope and include bacteria, viruses, fungi, and protoctists (mainly single-celled life forms such as amoebae and algae). Although people are familiar with the effects of microbes, such as infectious disease and food spoilage, because of their lack of visibility,…

There are more asthmatics in homes with high cockroach infestation

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Sarinho E.

2004-01-01

Full Text Available Although asthma has been commonly associated with sensitivity to cockroaches, a clear causal relationship between asthma, allergy to cockroaches and exposure levels has not been extensively investigated. The objective of the present study was to determine whether asthma occurs more frequently in children living in homes with high cockroach infestation. The intensity of household infestation was assessed by the number of dead insects after professional pesticide application. Children living in these houses in the metropolitan area of Recife, PE, were diagnosed as having asthma by means of a questionnaire based on the ISAAC study. All children had physician-diagnosed asthma and at least one acute exacerbation in the past year. Children of both sexes aged 4 to 12 years who had been living in the households for more than 2 years participated in this transverse study and had a good socioeconomic status. In the 172 houses studied, 79 children were considered to have been exposed to cockroaches and 93 not to have been exposed. Children living in residences with more than 5 dead cockroaches after pesticide application were considered to be at high infestation exposure. Asthma was diagnosed by the questionnaire in 31.6% (25/79 of the exposed group and in 11.8% (11/93 of the non-exposed group (P = 0.001, with a prevalence ratio of 3.45 (95%CI, 1.48-8.20. The present results indicate that exposure to cockroaches was significantly associated with asthma among the children studied and can be considered a risk factor for the disease. Blattella germanica and Periplaneta americana were the species found in 96% of the infested houses.

Lice infesting horses in three agroecological zones in central Oromia.

Science.gov (United States)

Tafese, Adane; Jibat, Tariku; Aklilu, Nigatu; Zewdu, Hanna; Kumsa, Bersissa

2014-12-01

A cross-sectional study was conducted to determine the prevalence and species composition of lice infesting horses in three agroecological zones in seven different districts in central Oromia from November 2011 to April 2012. For this purpose, a total of 420 horses were thoroughly examined for presence of lice. Collected lice were identified to species level under a microscope. The study showed an overall prevalence of 28.8 % (121/420) lice infestation on horses. We identified two spp. of lice on horses namely, Bovicola (Werneckiella) equi and Haematopinus asini with an overall prevalence of 22.9 % (96/420) and 5.9 % (25/420), respectively. The overall prevalence of lice infestation on horses in districts was 48.3, 43.3, 33.3, 23.3, 21.7, 18.3 and 13.3 %, in Debre Brehan, Shashemene, Hawassa, Akaki, Adama, Modjo and Bishoftu, respectively. B. equi was encountered as the predominant species on horses in all districts. Higher overall prevalence of lice infestation was recorded in highland agroecology than mid and lowland agroecological zones. Similarly, our study revealed significantly higher overall prevalence of lice on saddle horses than on cart horses. In view of the findings of the present study two species of lice are responsible for health and welfare problems of horses in all the districts. Detailed epidemiological studies on the significance, prevalence and role of lice as vectors of zoonotic pathogens in different agroecological zones, breeds and management systems warrant urgent attention. Animal owners and veterinarians should consider lice control in horses as part of the ectoparasite control in other species of animals.

Effects of intensive forest management practices on insect infestation levels and loblolly pine growth

Science.gov (United States)

John T. Nowak; C. Wayne Berisford

2000-01-01

Intensive forest management practices have been shown to increase tree growth and shorten rotation time. However, they may also lead to an increased need for insect pest management because of higher infestation levels and lower action thresholds. To investigate the relationship between intensive management practices arid insect infestation, maximum growth potential...

Ectoparasites in urban stray cats in Jerusalem, Israel: differences in infestation patterns of fleas, ticks and permanent ectoparasites.

Science.gov (United States)

Salant, H; Mumcuoglu, K Y; Baneth, G

2014-09-01

In a period cross-sectional study performed to examine ectoparasites on 340 stray cats in Jerusalem, Israel, 186 (54.7%) were infested with the cat flea, Ctenocephalides felis (Siphonaptera: Pulicidae), 49 (14.4%) with the cat louse, Felicola subrostratus (Phthiraptera: Trichodectidae), 41 (12.0%) with the ear mite, Otodectes cynotis (Astigmata: Psoroptidae), three (0.9%) with the fur mite, Cheyletiella blakei (Trobidiformes: Cheyletidae), two (0.6%) with the itch mite Notoedres cati (Astigmata: Sarcoptidae), and 25 (7.3%) with ticks of the species Rhipicephalus sanguineus sensu lato (Ixodida: Ixodidae), Rhipicephalus turanicus or Haemaphysalis adleri (Ixodida: Ixodidae). A higher number of flea infestations was observed in apparently sick cats (P < 0.05) and in cats aged < 6 months (P < 0.05). The proportion of flea-infested cats (P < 0.01), as well as the number of fleas per infested cat (P < 0.01), was higher in autumn than in other seasons. By contrast with findings in cats with flea infestations, rates of infestation with ticks were higher amongst cats with clinical signs (P < 0.01) and cats aged ≥ 6 months (P < 0.05). The high rates of ectoparasite infestation in the cats studied constitute a risk for the spread of vector-borne infections of zoonotic and veterinary importance. © 2013 The Royal Entomological Society.

Spatial distribution of residence time, microbe and storage volume of groundwater in headwater catchments

Science.gov (United States)

Tsujimura, Maki; Ogawa, Mahiro; Yamamoto, Chisato; Sakakibara, Koichi; Sugiyama, Ayumi; Kato, Kenji; Nagaosa, Kazuyo; Yano, Shinjiro

2017-04-01

Headwater catchments in mountainous region are the most important recharge area for surface and subsurface waters, and time and stock information of the water is principal to understand hydrological processes in the catchments. Also, a variety of microbes are included in the groundwater and spring water, and those varies in time and space, suggesting that information of microbe could be used as tracer for groundwater flow system. However, there have been few researches to evaluate the relationship among the residence time, microbe and storage volume of the groundwater in headwater catchments. We performed an investigation on age dating using SF6 and CFCs, microbe counting in the spring water, and evaluation of groundwater storage volume based on water budget analysis in 8 regions underlain by different lithology, those are granite, dacite, sedimentary rocks, serpentinite, basalt and volcanic lava all over Japan. We conducted hydrometric measurements and sampling of spring water in base flow conditions during the rainless periods 2015 and 2016 in those regions, and SF6, CFCs, stable isotopic ratios of oxygen-18 and deuterium, inorganic solute concentrations and total number of prokaryotes were determined on all water samples. Residence time of spring water ranged from 0 to 16 years in all regions, and storage volume of the groundwater within topographical watershed was estimated to be 0.1 m to 222 m in water height. The spring with the longer residence time tends to have larger storage volume in the watershed, and the spring underlain by dacite tends to have larger storage volume as compared with that underlain by sand stone and chert. Also, total number of prokaryotes in the spring water ranged from 103 to 105 cells/mL, and the spring tends to show clear increasing of total number of prokaryotes with decreasing of residence time. Thus, we observed a certain relationship among residence time, storage volume and total number of prokaryotes in the spring water, and

Two-way plant mediated interactions between root-associated microbes and insects: from ecology to mechanisms

Directory of Open Access Journals (Sweden)

Nurmi ePangesti

2013-10-01

Full Text Available Plants are members of complex communities and function as a link between above- and below-ground organisms. Associations between plants and soil-borne microbes commonly occur and have often been found beneficial for plant fitness. Root-associated microbes may trigger physiological changes in the host plant that influence interactions between plants and aboveground insects at several trophic levels. Aboveground, plants are under continuous attack by insect herbivores and mount multiple responses that also have systemic effects on belowground microbes. Until recently, both ecological and mechanistic studies have mostly focused on exploring these below- and above-ground interactions using simplified systems involving both single microbe and herbivore species, which is far from the naturally occurring interactions. Increasing the complexity of the systems studied is required to increase our understanding of microbe - plant - insect interactions and to gain more benefit from the use of non-pathogenic microbes in agriculture. In this review, we explore how colonization by either single non-pathogenic microbe species or a community of such microbes belowground affects plant growth and defense and how this affects the interactions of plants with aboveground insects at different trophic levels. Moreover, we review how plant responses to foliar herbivory by insects belonging to different feeding guilds affect interactions of plants with non-pathogenic soil-borne microbes. The role of phytohormones in coordinating plant growth, plant defenses against foliar herbivores while simultaneously establishing associations with non-pathogenic soil microbes is discussed.

CONCOMITANT HELMINTHIC AND ENTERO-PROTOZOAL INFESTATION IN INDIAN PEAFOWL

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B. Dutta

2013-06-01

Full Text Available Concomitant infestation of Ascaridia spp. along with Raillietina spp. and Emeria spp. has been identified in Indian Peafowl (Pavo cristatus of Ramnabagan Mini Zoo, Burdwan, West Bengal, India.

Infestation of zooplankton with Triaenophorus and Proteocephalus procercoids (Cestoda in a deep oligotrophic lake

Directory of Open Access Journals (Sweden)

Peter Anegg

2014-07-01

Full Text Available In spring 2004, a massive infestation of the whitefish population in the Austrian Lake Achensee with Triaenophorus crassus was observed. Procercoids, the larval stage of parasitic cestodes, infest copepods as their first intermediate host. Therefore, in spring 2011, zooplankton samples were taken weekly at two sampling sites and depth ranges to determine the abundances of crustaceans as well as percentages of infected copepods and temporal occurrence of parasites. In addition, whitefish (Coregonus lavaretus stomach contents were analysed for food spectrum and parasite infestation. From the end of June to mid-August, procercoids of Triaenophorus spp. were detected in Cyclops abyssorum, the only first intermediate host for this parasite in Lake Achensee. Highest percentages of infected copepods were reached in mid-July (prevalence: 0.38%. Furthermore, an infestation of Proteocephalus sp. was observed in this copepod species, which occurred earlier until the end of the sampling period (prevalence: 1.34%. Besides C. abyssorum, also Eudiaptomus gracilis was occasionally infected with Proteocephalus (prevalence: 0.05%. The procercoids were found in both depth ranges, with no clear vertical infestation preference. More female C. abyssorum were Triaenophorus-infected than males, while the opposite was observed for Proteocephalus infection. The whitefish stomachs contained large numbers of Proteocephalus and Triaenophorus procercoids, coinciding with the occurrence of these parasites in the copepods.

Direct and indirect impacts of infestation of tomato plant by Myzus persicae (Hemiptera: Aphididae on Bemisia tabaci (Hemiptera: Aleyrodidae.

Directory of Open Access Journals (Sweden)

Xiao-Ling Tan

Full Text Available The impacts of infestation by the green peach aphid (Myzus persicae on sweetpotato whitefly (Bemisia tabaci settling on tomato were determined in seven separate experiments with whole plants and with detached leaves through manipulation of four factors: durations of aphid infestation, density of aphids, intervals between aphid removal after different durations of infestation and the time of whitefly release, and leaf positions on the plants. The results demonstrated that B. tabaci preferred to settle on the plant leaves that had not been infested by aphids when they had a choice. The plant leaves on which aphids were still present (direct effect had fewer whiteflies than those previously infested by aphids (indirect effect. The whiteflies were able to settle on the plant which aphids had previously infested, and also could settle on leaves with aphids if no uninfested plants were available. Tests of direct factors revealed that duration of aphid infestation had a stronger effect on whitefly landing preference than aphid density; whitefly preference was the least when 20 aphids fed on the leaves for 72 h. Tests of indirect effects revealed that the major factor that affected whitefly preference for a host plant was the interval between the time of aphid removal after infestation and the time of whitefly release. The importance of the four factors that affected the induced plant defense against whiteflies can be arranged in the following order: time intervals between aphid removal and whitefly release > durations of aphid infestation > density of aphids > leaf positions on the plants. In conclusion, the density of aphid infestation and time for which they were feeding influenced the production of induced compounds by tomatoes, the whitefly responses to the plants, and reduced interspecific competition.

Effects of Ginkgo biloba constituents on fruit-infesting behavior of codling moth (Cydia pomonella) in apples.

Science.gov (United States)

Pszczolkowski, Maciej A; Durden, Kevin; Sellars, Samantha; Cowell, Brian; Brown, John J

2011-10-26

Codling moth, Cydia pomonella (L.), is a cosmopolitan pest of apple, potentially causing severe damage to the fruit. Currently used methods of combating this insect do not warrant full success or are harmful to the environment. The use of plant-derived semiochemicals for manipulation with fruit-infesting behavior is one of the new avenues for controlling this pest. Here, we explore the potential of Ginkgo biloba and its synthetic metabolites for preventing apple feeding and infestation by neonate larvae of C. pomonella. Experiments with crude extracts indicated that deterrent constituents of ginkgo are present among alkylphenols, terpene trilactones, and flavonol glycosides. Further experiments with ginkgo synthetic metabolites of medical importance, ginkgolic acids, kaempferol, quercetin, isorhamnetin, ginkgolides, and bilobalide, indicated that three out of these chemicals have feeding deterrent properties. Ginkgolic acid 15:0 prevented fruit infestation at concentrations as low as 1 mg/mL, bilobalide had deterrent effects at 0.1 mg/mL and higher concentrations, and ginkgolide B at 10 mg/mL. On the other hand, kaempferol and quercetin promoted fruit infestation by codling moth neonates. Ginkgolic acids 13:0, 15:1, and 17:1, isorhamnetin, and ginkgolides A and C had no effects on fruit infestation-related behavior. Our research is the first report showing that ginkgo constituents influence fruit infestation behavior and have potential applications in fruit protection.

Ecological suicide in microbes.

Science.gov (United States)

Ratzke, Christoph; Denk, Jonas; Gore, Jeff

2018-05-01

The growth and survival of organisms often depend on interactions between them. In many cases, these interactions are positive and caused by a cooperative modification of the environment. Examples are the cooperative breakdown of complex nutrients in microbes or the construction of elaborate architectures in social insects, in which the individual profits from the collective actions of her peers. However, organisms can similarly display negative interactions by changing the environment in ways that are detrimental for them, for example by resource depletion or the production of toxic byproducts. Here we find an extreme type of negative interactions, in which Paenibacillus sp. bacteria modify the environmental pH to such a degree that it leads to a rapid extinction of the whole population, a phenomenon that we call ecological suicide. Modification of the pH is more pronounced at higher population densities, and thus ecological suicide is more likely to occur with increasing bacterial density. Correspondingly, promoting bacterial growth can drive populations extinct whereas inhibiting bacterial growth by the addition of harmful substances-such as antibiotics-can rescue them. Moreover, ecological suicide can cause oscillatory dynamics, even in single-species populations. We found ecological suicide in a wide variety of microbes, suggesting that it could have an important role in microbial ecology and evolution.

Infestation of natural populations of earthworm cocoons by rhabditid and cephalobid nematodes

DEFF Research Database (Denmark)

Kraglund, HO; Ekelund, Flemming

2002-01-01

Nematodes infested 13 of 100 earthworm cocoons from a compost pile and 17 of 197 cocoons from a permanent pasture soil. Between one and 2000 nematodes were found within the infested cocoons. All nematodes found in cocoons from the compost pile belonged to the genus Rhabditis, while Rhabditis spp....... as well as members of Cephalobidae infested earthworm cocoons in the pasture soil. In cultures established from cocoons found in the pasture soil, at least five different types of nematodes belonging to the family Cephalobidae were found. Acrobeloides nanus was found in six cocoons, Cephalobus persegnis...... was found in four and Chiloplacus minimus was found in one cocoon. We suggest that earthworm - nematode interactions may be an important pathway for the transfer of carbon in terrestrial ecosystems, and that the inclusion of these pathways may lead to a better understanding of soil food web functioning....

A global census of marine microbes

Digital Repository Service at National Institute of Oceanography (India)

Amaral-Zettler, L.; Artigas, L.F.; Baross, J.; LokaBharathi, P.A; Boetius, A; Chandramohan, D.; Herndl, G.; Kogure, K.; Neal, P.; Pedros-Alio, C.; Ramette, A; Schouten, S.; Stal, L.; Thessen, A; De Leeuw, J.; Sogin, M.

In this chapter we provide a brief history of what is known about marine microbial diversity, summarize our achievements in performing a global census of marine microbes, and reflect on the questions and priorities for the future of the marine...

Volatiles from Psylla-infested pear trees and their possible involvement in attraction of anthocorid predators

NARCIS (Netherlands)

Scutareanu, P.; Drukker, B.; Bruin, J.; Posthumus, M.A.; Sabelis, M.W.

1997-01-01

Previous work showed that anthocorid predators aggregate around gauze cages containing Psylla-infested trees in a pear orchard. Because anthocorids responded to odor from Psylla-infested leaves in a laboratory test, it was hypothesized that these aggregative responses in the field were triggered by

Why microbes will rule the world – and our industries

DEFF Research Database (Denmark)

Lykke, Anne Wärme; Palsson, Bernhard; Nielsen, Jens

2017-01-01

Microbes have ruled the world for approximately 4 billion years. But the future actually depends on their dominance, some would argue. Why? Because microbes, as well as mammalian cells, can be engineered into producing high-value chemicals and medicine. Therefore, scientists at The Novo Nordisk...... Foundation Center for Biosustainability are hard at work developing cell factories to benefit us all....

Helicopter thermal imaging for detecting insect infested cadavers.

Science.gov (United States)

Amendt, Jens; Rodner, Sandra; Schuch, Claus-Peter; Sprenger, Heinz; Weidlich, Lars; Reckel, Frank

2017-09-01

One of the most common techniques applied for searching living and even dead persons is the FLIR (Forward Looking Infrared) system fixed on an aircraft like e.g. a helicopter, visualizing the thermal patterns emitted from objects in the long-infrared spectrum. However, as body temperature cools down to ambient values within approximately 24h after death, it is common sense that searching for deceased persons can be just applied the first day post-mortem. We postulated that the insect larval masses on a decomposing body generate a heat which can be considerably higher than ambient temperatures for a period of several weeks and that such heat signatures might be used for locating insect infested human remains. We examined the thermal history of two 70 and 90kg heavy pig cadavers for 21days in May and June 2014 in Germany. Adult and immature insects on the carcasses were sampled daily. Temperatures were measured on and inside the cadavers, in selected maggot masses and at the surroundings. Thermal imaging from a helicopter using the FLIR system was performed at three different altitudes up to 1500ft. during seven day-flights and one night-flight. Insect colonization was dominated by blow flies (Diptera: Calliphoridae) which occurred almost immediately after placement of the cadavers. Larvae were noted first on day 2 and infestation of both cadavers was enormous with several thousand larvae each. After day 14 a first wave of post-feeding larvae left the carcasses for pupation. Body temperature of both cadavers ranged between 15°C and 35°C during the first two weeks of the experiment, while body surface temperatures peaked at about 45°C. Maggot masses temperatures reached values up to almost 25°C above ambient temperature. Detection of both cadavers by thermal imaging was possible on seven of the eight helicopter flights until day 21. Copyright © 2017 The Chartered Society of Forensic Sciences. Published by Elsevier B.V. All rights reserved.

Fast Detection of Striped Stem-Borer (Chilo suppressalis Walker Infested Rice Seedling Based on Visible/Near-Infrared Hyperspectral Imaging System

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Yangyang Fan

2017-10-01

Full Text Available Striped stem-borer (SSB infestation is one of the most serious sources of damage to rice growth. A rapid and non-destructive method of early SSB detection is essential for rice-growth protection. In this study, hyperspectral imaging combined with chemometrics was used to detect early SSB infestation in rice and identify the degree of infestation (DI. Visible/near-infrared hyperspectral images (in the spectral range of 380 nm to 1030 nm were taken of the healthy rice plants and infested rice plants by SSB for 2, 4, 6, 8 and 10 days. A total of 17 characteristic wavelengths were selected from the spectral data extracted from the hyperspectral images by the successive projection algorithm (SPA. Principal component analysis (PCA was applied to the hyperspectral images, and 16 textural features based on the gray-level co-occurrence matrix (GLCM were extracted from the first two principal component (PC images. A back-propagation neural network (BPNN was used to establish infestation degree evaluation models based on full spectra, characteristic wavelengths, textural features and features fusion, respectively. BPNN models based on a fusion of characteristic wavelengths and textural features achieved the best performance, with classification accuracy of calibration and prediction sets over 95%. The accuracy of each infestation degree was satisfactory, and the accuracy of rice samples infested for 2 days was slightly low. In all, this study indicated the feasibility of hyperspectral imaging techniques to detect early SSB infestation and identify degrees of infestation.

A novel growth-promoting microbe, Methylobacterium funariae sp. nov., isolated from the leaf surface of a common moss

OpenAIRE

Schauer, S; Kutschera, U

2011-01-01

Land plants (embryophytes) evolved in the presence of prokaryotic microbes. As a result, numerous mutually beneficial associations (symbioses) developed that can be analyzed using a variety of methods. Here we describe the isolation and characterization of a new pink-pigmented facultatively methylotrophic symbiotic bacterium of the genus Methylobacterium (laboratory strain F3.2) that was isolated from the gametophytic phylloids of the common cord moss Funaria hygrometrica Hedw. Plantlets were...

Ortholog - MicrobeDB.jp | LSDB Archive [Life Science Database Archive metadata

Lifescience Database Archive (English)

Full Text Available List Contact us MicrobeDB.jp Ortholog Data detail Data name Ortholog DOI 10.18908/lsdba.nbdc01181-010.V002 V...814 triples - About This Database Database Description Download License Update History of This Database Site Policy | Contact Us Ortholog - MicrobeDB.jp | LSDB Archive ...

Effects of microbes on the immune system

National Research Council Canada - National Science Library

Fujinami, Robert S; Cunningham, Madeleine W

2000-01-01

.... The book synthesizes recent discoveries on the various mechanisms by which microbes subvert the immune response and on the role of these immunologic mechanisms in the pathogenesis of infectious diseases...

Survey of Hard Ticks (Ixodidae) Infesting Camels ( Camelus ...

African Journals Online (AJOL)

To determine the prevalence and abundance of hard ticks infesting camels, 414 nomadic one - humped camels in Kano State, northwestern Nigeria were selected by random sampling and examined for the presence of ticks on their bodies between January and December 2007. Three species of ticks, Amblyomma ...

Research progress and application prospect of radiation-resistant prokaryotic microbe

International Nuclear Information System (INIS)

Wang Wei; Zhu Jing; Zhang Zhidong; Tang Qiyong; Chen Ming

2013-01-01

Radiation-resistant microbe is becoming the research hotspot because of its special life phenomenon and physiological mechanism. Radiation-resistant bacteria are one kind of the most studied radiation-resistant microbe. This article summarized some aspects of the research on radiation-resistant bacteria, including the radiation resistant bacteria resources, and discussed its potential application prospects in the environmental engineering, biotechnology, human health, military and space et al. (authors)

Relative importance of meteorological and geographical factors in the distribution of Fasciola hepatica infestation in farmed sheep in Qinghai province, China

Directory of Open Access Journals (Sweden)

Qin Hongyu

2016-01-01

Full Text Available Fasciola hepatica is an important trematode parasite of economic importance that infests sheep and cattle worldwide. We conducted a detailed investigation into the spatial distribution of F. hepatica infestation in farmed sheep in Qinghai (Wutumeiren province, Mainland China. Mathematical modelling was used to assess the inter-relationships between meteorological and geographical factors and the risk of F. hepatica infestation across the province. A capture enzyme-linked immunosorbent assay (ELISA test (MM3-SERO was used to detect F. hepatica infestation. A niche model based on the maximum entropy method (MaxEnt was used to estimate the influence of meteorological and geographical factors on the observed spatial distribution of F. hepatica infestation. Results of jackknife analysis indicated that temperature, precipitation, solar radiation, digital elevation and slope were associated with the occurrence of F. hepatica infestation, and that infestation rates were significantly higher among animals from districts with a high percentage of grassland habitat. The findings indicate that meteorological and geographical factors may be important variables affecting the distribution of F. hepatica infestation and should be taken into account in the development of future surveillance and control programmes for fascioliasis.

Thelazia callipaeda infestation in Bangladesh: a case report.

Science.gov (United States)

Akhanda, A H; Akonjee, A R; Hossain, M M; Rahman, M A; Mishu, F A; Hasan, M F; Akhanda, T H

2013-07-01

A 5 years old girl was admitted to Ophthalmology department of Mymensingh Medical College Hospital, Mymensingh with excessive watering, redness and movement of something in her right eye for last 2 months. She had unaided visual acuity- 6/6, matted eye lashes and mucoid discharge in right eye. Follicles were present on the fornices and lower palpebral conjunctiva of the same eye. On eversion of the right upper lid there were silicon tube like coiled moving structures seen at the lateral part of the upper fornics. Six nematodes were seen in the upper fornics around the duct of lacrimal glands. After removing the nematodes, one specimen was sent to parasitology department of Bangladesh Agriculture University for species identification. They reported that sending specimen is an adult "Thelazia Callipaeda". By the present study, the presence of human ocular T. callipaeda infestation is second reported case in Bangladesh. Ophthalmologists should be aware about parasitic infestation of conjunctiva.

Infestation of fruit fly, Bactrocera (Diptera: Tephritidae) on mango ...

African Journals Online (AJOL)

Infestation of fruit fly, Bactrocera (Diptera: Tephritidae) on mango ( Mangifera indica L.) in peninsular Malaysia. ... Abstract. A survey was carried out in mango orchards in Peninsular Malaysia with aimed to determine the ... HOW TO USE AJOL.

Clinical laboratory evaluation of the Auto-Microbic system for rapid identification of Enterobacteriaceae.

OpenAIRE

Hasyn, J J; Cundy, K R; Dietz, C C; Wong, W

1981-01-01

The capability of the Auto-Microbic system (Vitek Systems, Inc., Hazelwood, Mo.) has been expanded to identify members of the family Enterobacteriaceae with the use of a sealed, disposable accessory card (the Enterobacteriaceae Biochemical Card) containing 26 biochemical tests. To judge the accuracy of the AutoMicrobic system's identification in a hospital laboratory, 933 Enterobacteriaceae isolates were studied. The AutoMicrobic system provided the correct identification for 905 of the isola...

Spatial heterogeneity in soil microbes alters outcomes of plant competition.

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Karen C Abbott

Full Text Available Plant species vary greatly in their responsiveness to nutritional soil mutualists, such as mycorrhizal fungi and rhizobia, and this responsiveness is associated with a trade-off in allocation to root structures for resource uptake. As a result, the outcome of plant competition can change with the density of mutualists, with microbe-responsive plant species having high competitive ability when mutualists are abundant and non-responsive plants having high competitive ability with low densities of mutualists. When responsive plant species also allow mutualists to grow to greater densities, changes in mutualist density can generate a positive feedback, reinforcing an initial advantage to either plant type. We study a model of mutualist-mediated competition to understand outcomes of plant-plant interactions within a patchy environment. We find that a microbe-responsive plant can exclude a non-responsive plant from some initial conditions, but it must do so across the landscape including in the microbe-free areas where it is a poorer competitor. Otherwise, the non-responsive plant will persist in both mutualist-free and mutualist-rich regions. We apply our general findings to two different biological scenarios: invasion of a non-responsive plant into an established microbe-responsive native population, and successional replacement of non-responders by microbe-responsive species. We find that resistance to invasion is greatest when seed dispersal by the native plant is modest and dispersal by the invader is greater. Nonetheless, a native plant that relies on microbial mutualists for competitive dominance may be particularly vulnerable to invasion because any disturbance that temporarily reduces its density or that of the mutualist creates a window for a non-responsive invader to establish dominance. We further find that the positive feedbacks from associations with beneficial soil microbes create resistance to successional turnover. Our theoretical

Spatial heterogeneity in soil microbes alters outcomes of plant competition.

Science.gov (United States)

Abbott, Karen C; Karst, Justine; Biederman, Lori A; Borrett, Stuart R; Hastings, Alan; Walsh, Vonda; Bever, James D

2015-01-01

Plant species vary greatly in their responsiveness to nutritional soil mutualists, such as mycorrhizal fungi and rhizobia, and this responsiveness is associated with a trade-off in allocation to root structures for resource uptake. As a result, the outcome of plant competition can change with the density of mutualists, with microbe-responsive plant species having high competitive ability when mutualists are abundant and non-responsive plants having high competitive ability with low densities of mutualists. When responsive plant species also allow mutualists to grow to greater densities, changes in mutualist density can generate a positive feedback, reinforcing an initial advantage to either plant type. We study a model of mutualist-mediated competition to understand outcomes of plant-plant interactions within a patchy environment. We find that a microbe-responsive plant can exclude a non-responsive plant from some initial conditions, but it must do so across the landscape including in the microbe-free areas where it is a poorer competitor. Otherwise, the non-responsive plant will persist in both mutualist-free and mutualist-rich regions. We apply our general findings to two different biological scenarios: invasion of a non-responsive plant into an established microbe-responsive native population, and successional replacement of non-responders by microbe-responsive species. We find that resistance to invasion is greatest when seed dispersal by the native plant is modest and dispersal by the invader is greater. Nonetheless, a native plant that relies on microbial mutualists for competitive dominance may be particularly vulnerable to invasion because any disturbance that temporarily reduces its density or that of the mutualist creates a window for a non-responsive invader to establish dominance. We further find that the positive feedbacks from associations with beneficial soil microbes create resistance to successional turnover. Our theoretical results constitute an

Efficacy of imidacloprid + moxidectin and selamectin topical solutions against the KS1 Ctenocephalides felis flea strain infesting cats

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Dryden Michael W

2011-09-01

Full Text Available Abstract Background Two studies were conducted to evaluate and compare the efficacy of imidacloprid + moxidectin and selamectin topical solutions against the KS1 flea strain infesting cats. In both studies the treatment groups were comprised of non-treated controls, 6% w/v selamectin (Revolution®; Pfizer Animal Health topical solution and 10% w/v imidacloprid + 1% w/v moxidectin (Advantage Multi® for Cats, Bayer Animal Health topical solution. All cats were infested with 100 fleas on Days -2, 7, 14, 21, and 28. The difference in the studies was that in study #1 efficacy evaluations were conducted at 24 and 48 hours post-treatment or post-infestation, and in study #2 evaluations were conducted at 12 and 24 hours. Results In study #1 imidacloprid + moxidectin and the selamectin formulation provided 99.8% and 99.0% efficacy at 24 hours post-treatment. On day 28, the 24 hour efficacy of the selamectin formulation dropped to 87.1%, whereas the imidacloprid + moxidectin formulation provided 98.9% efficacy. At the 48 hour assessments following the 28 day infestations, efficacy of the imidacloprid + moxidectin and selamectin formulations was 96.8% and 98.3% respectively. In study # 2 the efficacy of the imidacloprid + moxidectin and selamectin formulations 12 hours after treatment was 100% and 69.4%, respectively. On day 28, efficacy of the imidacloprid + moxidectin and selamectin formulations 12 hours after infestation was 90.2% and 57.3%, respectively. In study #2 both formulations provided high levels of efficacy at the 24 hour post-infestation assessments, with selamectin and imidacloprid + moxidectin providing 95.3% and 97.5% efficacy, following infestations on day 28. Conclusions At the 24 and 48 hour residual efficacy assessments, the imidacloprid + moxidectin and selamectin formulations were similarly highly efficacious. However, the imidacloprid + moxidectin formulation provided a significantly higher rate of flea kill against the KS1 flea

An experiment to detect apples infested by the peach fruit moth, Carposina sasakii matsumura (Lepidoptera: Carposinidae), using near-infrared spectroscopy

International Nuclear Information System (INIS)

Toyoshima, S.; Nakamoto, Y.; Takanashi, M.; Masuda, T.

2006-01-01

The potential of near-infrared spectroscopy to detect apples ('Fuji' cultivar) infested by the peach fruit moth, Carposina sasakii, was evaluated using a prevalent NIR device. A calibration equation was developed using both the NIR spectra and injury levels of the infested fruits. The equation predicted the injury levels of fruits using a simple correlation coefficient of 0.8868 and a standard error of prediction of 0.3688. At the level of estimates to discard ca 90% of infested fruits, 90.15% of the infested fruits and 39.24% of the uninfested fruits were excluded from the samples. Although its accuracy was not sufficient, the present NIR device has the potential to identify internally infested fruits

Mites and fungi in heavily infested stores in the Czech Republic.

Science.gov (United States)

Hubert, J; Stejskal, V; Munzbergová, Z; Kubátová, A; Vánová, M; Zd'árková, E

2004-12-01

Toxigenic and allergen-producing fungi represent a serious hazard to human food and animal feed safety. Ninety-four fungal species were isolated from mite-infested samples of seeds taken from Czech seed stores. Fungi were isolated from the surface of four kinds of seeds (wheat, poppy, lettuce, and mustard) and from the gut and external surface of five species of mites (i.e., Acarus siro L., 1758, Caloglyphus rhizoglyphoides (Zachvatkin, 1973), Lepidoglyphus destructor (Schrank, 1781), Tyrophagus putrescentnae (Schrank, 1781) and Cheyletus malaccensis Oudemans 1903) separately. Multivariate analysis of fungi complex composition showed that the frequency of fungal was species significantly influenced by the kind of seed. Fungal frequencies differed between mites gut and exoskeleton surface and between the surfaces of mites and seeds. Three groups of fungal species were recognized: 1) mite surface-associated fungi: Penicillium brevicompactum, Alternaria alternata, and Aspergillus versicolor; 2) mite surface- and seed-associated fungi: Aspergillus niger, Penicillium crustosum, Penicillium aurantiogriseum, Penicillium chrysogenum, and Aspergillus flavus; and 3) seed-associated fungi: Cladosporium herbarum, Mucor dimorphosporus f. dimorphosporus, Botrytis cinerea, Penicillium griseofulvum, and Eurotium repens. Mite-carried species of microfungi are known to produce serious mycotoxins (e.g., aflatoxin B1, cyclopiazonic acid, sterigmatocystin, ochratoxin A, and nephrotoxic glycopeptides) as well as allergen producers (e.g., A. alternata and P. brevicompactum). Storage mites may play an important role in the spread of some medically hazardous micromycetes. In addition, these mite-fungi associations may heighten the risk of occurrence of mycotoxins in food and feed stuffs and cause mixed contamination by fungal and mite allergens.

Parasites and vector-borne diseases in client-owned dogs in Albania: infestation with arthropod ectoparasites.

Science.gov (United States)

Shukullari, Enstela; Rapti, Dhimitër; Visser, Martin; Pfister, Kurt; Rehbein, Steffen

2017-01-01

To establish the diversity and seasonality of ectoparasite infestation in client-owned dogs in Albania, 602 dogs visiting four small animal clinics in Tirana from March 2010 to April 2011 inclusive were examined for ectoparasites by full body search and total body comb. In addition, ear swab specimens collected from all dogs and scrapings taken from skin lesions suspicious of mite infestation were examined for parasitic mites. Overall, 93 dogs (15.4 %, 95%CI 12.6-18.6) were demonstrated to be infested, and nine species of ectoparasites were identified: Ixodes ricinus, 0.8 %; Rhipicephalus sanguineus s. l., 8.1 %; Demodex canis, 0.2 %; Sarcoptes scabiei, 0.7 %; Otodectes cynotis, 2.8 %; Ctenocephalides canis, 4.8 %; Ctenocephalides felis, 3.0 %; Pulex irritans, 0.2 %; and Trichodectes canis, 0.2 %. Single and multiple infestations with up to four species of ectoparasites concurrently were recorded in 67 (11.1 %, 95%CI 8.7-13.9) and 26 dogs (4.3 %, 95%CI 2.8-6.3), respectively. On univariate analysis, the category of breed (pure breed dogs vs. mixed-breed dogs), the dog's purpose (pet, hunting dog, working dog), the housing environment (mainly indoors/indoors with regular outside walking vs. yard plus kennel/run), the history of ectoparasiticide treatment and the season of examination were identified as significant (p < 0.05) factors predisposing dogs to various ectoparasites, while the variables dog's age, gender, the dog's habitat (city, suburban, rural) and the presence/absence of other pets were not significant predictors. Multivariate logistic regression analysis for factors associated with overall ectoparasitism revealed that dogs treated with ectoparasiticides at least once per year (odds ratio [OR] = 0.24; p < 0.001) had a significantly lower risk of infestation compared with dogs not treated against ectoparasite infestation. Dogs examined during spring, summer and autumn (OR = 7.08, 7.43 and 2.48, respectively; all p < 0

Biofilms for Babies: Introducing Microbes and Biofilms to Preschool-Aged Children

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Jillian M. Couto

2017-05-01

Full Text Available Microbes are beneficial to life on our planet as they facilitate natural processes such as global nutrient cycling in our environment. This article details a 30-minute activity to introduce pre-school children ranging from 3 to 5 years of age to microbes and biofilms in the natural environment.

Considérations nosographiques sur le délire d'infestation parasitaire à travers trois observations cliniques

Science.gov (United States)

Berhili, Nabil; Bout, Amine; Hlal, Hayat; Aarab, Chadya; Aalouane, Rachid; Rammouz, Ismail

2016-01-01

Le syndrome d'Ekbom, ou délire d'infestation parasitaire, est une pathologie rare, caractérisée par la conviction inébranlable d'avoir une peau infestée d'insectes ou de parasites. Il s'agit d'un délire monothématique à mécanisme hallucinatoire qui touche typiquement les femmes d’âge avancé. Nous rapportons les cas de trois patients qui présentent un délire d'infestation parasitaire dans des contextes cliniques différents. Le premier patient souffre d'un délire d'infestation isolé correspondant à la forme décrite par Karl Ekbom. Le deuxième cas présente un délire d'infestation secondaire, s'inscrivant dans le cadre d'une leuco-encéphalopathie de type CADASIL. Enfin, le troisième patient se présente dans un tableau évocateur d'un épisode dépressif avec une caractéristique psychotique qui intègre le délire d'infestation. Ces trois vignettes cliniques illustrent parfaitement le caractère trans-nosographique de ce syndrome ainsi que les difficultés de prise en charge de ces patients, tant au niveau de l'alliance thérapeutique que sur le plan des choix en matière de traitement pharmacologiques. PMID:27642468

Preventive efficacy of Frontline® Combo and Certifect® against Dipylidium caninum infestation of cats and dogs using a natural flea (Ctenocephalides felis infestation model

Directory of Open Access Journals (Sweden)

Beugnet Frederic

2013-01-01

Full Text Available Two studies were performed to evaluate the effectiveness of two monthly topical anti-flea products for the prevention of Dipylidium caninum infestations in cats and dogs. A single treatment with Frontline® Combo spot-on for cats (fipronil-(S-methoprene and two successive monthly treatments of Certifect® for dogs (fipronil-amitraz-(S-methoprene were assessed for the prevention of D. caninum infestations following weekly challenges of treated cats or dogs with metacestode naturally-infected fleas. The rate of infestations using the model in cats versus dogs explains the choice of a 1-month trial in cats and a 2-month trial in dogs. The experimental flea-infection model resulted in a range of 22–53% of the fleas being infected by Dipylidium cysticercoids. The arithmetic mean flea counts recorded for the untreated cats ranged from 51.2 to 68. The geometric mean flea counts recorded for the Frontline Combo treated cats differed significantly (p < 0.05 from those of the untreated control cats on all assessment days. The arithmetic mean flea counts recorded for the untreated dogs ranged from 166.6 to 238.6. The geometric mean flea counts recorded for the Certifect treated dogs differed significantly (p < 0.001 from those of the untreated group on all assessment days. Frontline Combo treatment on cats provided ≥99.8% persistent anti-flea efficacy throughout the 30-day treatment period. In the dog study, the two Certifect treatments provided ≥97% persistent efficacy throughout the 60-day study. Based on the collection of expelled D. caninum proglottids by cats, 100% (6/6 of the control cats and 0% (0/6 of Frontline Combo treated cats were infested with D. caninum. Frontline Combo spot-on for cats was therefore 100% effective in preventing infection with D. caninum. In dogs, 7 out of the 8 control group dogs (87.5% produced proglottids following infestation of infected fleas, whereas 0 out of 8 dogs (0% in the treated group were infected. The

Gene expression and plant hormone levels in two contrasting rice genotypes responding to brown planthopper infestation.

Science.gov (United States)

Li, Changyan; Luo, Chao; Zhou, Zaihui; Wang, Rui; Ling, Fei; Xiao, Langtao; Lin, Yongjun; Chen, Hao

2017-02-28

The brown planthopper (BPH; Nilaparvata lugens Stål) is a destructive piercing-sucking insect pest of rice. The plant hormones salicylic acid (SA) and jasmonic acid (JA) play important roles in plant-pest interactions. Many isolated rice genes that modulate BPH resistance are involved in the metabolism or signaling pathways of SA, JA and ethylene. 'Rathu Heenati' (RH) is a rice cultivar with a high-level, broad-spectrum resistance to all BPH biotypes. Here, RH was used as the research material, while a BPH-susceptible rice cultivar 'Taichung Native 1' (TN1) was the control. A cDNA microarray analysis illuminated the resistance response at the genome level of RH under BPH infestation. The levels of SA and JA in RH and TN1 seedlings after BPH infestation were also determined. The expression pattern clustering indicated that 1467 differential probe sets may be associated with constitutive resistance and 67 with the BPH infestation-responsive resistance of RH. A Venn diagram analysis revealed 192 RH-specific and BPH-inducible probe sets. Finally, 23 BPH resistance-related gene candidates were selected based on the expression pattern clustering and Venn diagram analysis. In RH, the SA content significantly increased and the JA content significantly decreased after BPH infestation, with the former occurring prior to the latter. In RH, the differential genes in the SA pathway were synthesis-related and were up-regulated after BPH infestation. The differential genes in the JA pathway were also up-regulated. They were jasmonate ZIM-domain transcription factors, which are important negative regulators of the JA pathway. Comparatively, genes involved in the ET pathway were less affected by a BPH infestation in RH. DNA sequence analysis revealed that most BPH infestation-inducible genes may be regulated by the genetic background in a trans-acting manner, instead of by their promoters. We profiled the analysis of the global gene expression in RH and TN1 under BPH infestation

Is there an association between bruxism and intestinal parasitic infestation in children?

Science.gov (United States)

Díaz-Serrano, Kranya Victoria; da Silva, Carolina Brunelli Alvares; de Albuquerque, Sérgio; Pereira Saraiva, Maria da Conceição; Nelson-Filho, Paulo

2008-01-01

Multiple factors have been considered in the etiology of bruxism in pediatric patients, among which are infestations by intestinal parasites suggested by some authors. No empirical evidence exists, however, of such association. Therefore, this study's purpose was to investigate the existence of an association between bruxism and intestinal parasitic infestation in children. Fifty-seven 6- to 11-year-olds (30 cases and 27 controls) who had not used anthelminthics 2 months before the baseline examination were enrolled in the study. A diagnosis of bruxism was based on an intraoral clinical examination performed by a single trained examiner and on the parent/guardian's report of any perceived parafunctional habits (questionnaire-based interview). Bruxism cases were defined as those children with a report of currently perceived habits of eccentric or centric bruxism (tooth-grinding and tooth-clenching, respectively) combined with clinical evidence of nonphysiologic wear facets. The volunteers were required to collect 3 fecal samples (1 every 2 to 3 days). Parasitologic analysis was performed using the spontaneous sedimentation method. Data gathered from the intraoral clinical examination, questionnaire, and parasitologic analysis were tabulated and submitted to statistical analysis using the chi-square test and student's t test. Intestinal parasitic infestation was observed in 30% (N=9) of cases and 41% (N=11) of controls, but no statistically significant association was observed (P=.40). This study's findings do not support the existence of an association between intestinal parasitic infestation and bruxism among the evaluated pediatric population.

Companion animals symposium: role of microbes in canine and feline health.

Science.gov (United States)

Kil, D Y; Swanson, K S

2011-05-01

Whether in an ocean reef, a landfill, or a gastrointestinal tract (GIT), invisible communities of highly active and adaptable microbes prosper. Over time, mammals have developed a symbiosis with microbes that are important inhabitants not only in the GIT, but also in the mouth, skin, and urogenital tract. In the GIT, the number of commensal microbes exceeds the total number of host cells by at least 10 times. The GIT microbes play a critical role in nutritional, developmental, defensive, and physiologic processes in the host. Recent evidence also suggests a role of GIT microbes in metabolic phenotype and disease risk (e.g., obesity, metabolic syndrome) of the host. Proper balance is a key to maintaining GIT health. Balanced microbial colonization is also important for other body regions such as the oral cavity, the region with the greatest prevalence of disease in dogs and cats. A significant obstruction to studying microbial populations has been the lack of tools to identify and quantify microbial communities accurately and efficiently. Most of the current knowledge of microbial populations has been established by traditional cultivation methods that are not only laborious, time-consuming, and often inaccurate, but also greatly limited in scope. However, recent advances in molecular-based techniques have resulted in a dramatic improvement in studying microbial communities. These DNA-based high-throughput technologies have enabled us to more clearly characterize the identity and metabolic activity of microbes living in the host and their association with health and diseases. Despite this recent progress, however, published data pertaining to microbial communities of dogs and cats are still lacking in comparison with data in humans and other animals. More research is required to provide a more detailed description of the canine and feline microbiome and its role in health and disease.

Soil microbes and successful invasions of an exotic weed Eupatorium adenophorum

International Nuclear Information System (INIS)

Zhou, P.; Tang, T.; Zhao, P.; Chen, J.

2016-01-01

The effects of soil microbes collected from the two invasive species Eupatorium adenophorum and E. odoratum and the two native species E. japonicum and E. chinense on the growth and biomass of E. adenophorum was examined to explore a possible link between soil microbes and successful invasions of the weed species E. adenophorum. In most cases, plant height, stem diameter, root number and root length were significantly enhanced when E. adenophorum was grown in sterilized soils compared with those when one was grown in non-sterilized soils collected from the rhizosphere of E. adenophorum, E. japonicum and E. chinense. In contrast, the growth and biomass of E. adenophorum were apparently inhibited when grown in soils collected from the rhizosphere of E. odoratum. Plant height, stem diameter, leaf area per plant and root length of E. adenophorum was greater when it was grown in soils collected from the rhizosphere of E. adenophorum compared with those when it was grown in soils collected from the rhizosphere of E. odoratum, but the enhancement considerably greater when it was grown in soils collected from the rhizosphere of E. japonicum and E. chinense compared with those when it was grown in soils collected from the rhizosphere of E. adenophorum. In addition, the biomass allocation of E. adenophorum was not significantly affected by soil microbes and soil sources. These Results suggest that although the competitive advantage of the invasive weed E. adenophorum is not achieved solely by soil microbes, successful invasions of E. adenophorum may result partly from its release from the harmful soil microbes in its native range and the positive feedbacks of soil microbes from itself and the native species in its invading range. (author)

Intraperitoneal ectopic infestation of parasites invading through gastrointestinal tract : CT findings

Energy Technology Data Exchange (ETDEWEB)

Kim, Jeong Kon; Rha, Sung Eun; Ha, Hyun Kwon; Kim, Pyo Nyun; Lee, Moon Gyu; Auh, Yong Ho [Asan Medical Center, Ulsan Univ., Ulsan (Korea, Republic of); Choi, Byung Ihn [Seoul National Univ. College of Medicine, Seoul (Korea, Republic of); Shim, Jae Chul [Inje Univ. College of Medicine, Kimhae (Korea, Republic of); Kim, Hyun [St. Mary' s Hospital, The Catholic Univ. of Korea, Seoul (Korea, Republic of); Lee, Jong Hwa; Ham, Soo Youn [Ulsan Univ. Hospital, Ulsan (Korea, Republic of)

1999-03-01

The purpose of this study was to evaluate the CT findings of parasitic ectopic infestation in the peritoneal cavity, a transitional route for parasites invading the gastrointestinal tract, to migrate to various target organs. CT scans of nine patients with pathologically(n=8) or serologically(n=1) proven intraperitoneal involvement of parasitic infestation were retrospectively reviewed. The primary causes of parasitic infestation in nine patients were Paragonimus westermani(n=5), Sparganosis(n=2), and hepatic fascioliasis(n=2). We analyzed the CT findings with regard to the sites and patterns of lesions in the peritoneal cavity and gastrointestinal track, as well as in other solid organs. The clinical features of these patients were also evaluated. The clinical symptoms and signs were chronic abdominal pain and general weakness in seven patients, while peripheral blood eosinophilia was observed in four. The CT features of these nine patients included multiseptated cystic masses of 2-6cm, diameter (mean 4.1{+-}1.7cm) in the omentum or mesentery in six(67%), omental or mesenteric infiltration in seven(78%), focal peritoneal thickening in seven(78%), 1ymphadenopathy in five(56%), and ascites in four(44%). In six of the nine patients, the gastrointestinal tract(stomach in four, colon in one, both stomach and colon in one) was concomitantly involved with focal wall thickening. Branching patterns of hypoattenuating lesions were noted in the liver of three patients; two of these had hepatic fascioliasis and one had paragonimiasis. Ectopic parasitic infestation in the peritoneal cavity manifests as mass formation, adjacent gastrointestinal wall thickening, and focal peritonitis. An understanding of these image features is important for both early diagnosis and adequate treatment.

Intraperitoneal ectopic infestation of parasites invading through gastrointestinal tract : CT findings

International Nuclear Information System (INIS)

Kim, Jeong Kon; Rha, Sung Eun; Ha, Hyun Kwon; Kim, Pyo Nyun; Lee, Moon Gyu; Auh, Yong Ho; Choi, Byung Ihn; Shim, Jae Chul; Kim, Hyun; Lee, Jong Hwa; Ham, Soo Youn

1999-01-01

The purpose of this study was to evaluate the CT findings of parasitic ectopic infestation in the peritoneal cavity, a transitional route for parasites invading the gastrointestinal tract, to migrate to various target organs. CT scans of nine patients with pathologically(n=8) or serologically(n=1) proven intraperitoneal involvement of parasitic infestation were retrospectively reviewed. The primary causes of parasitic infestation in nine patients were Paragonimus westermani(n=5), Sparganosis(n=2), and hepatic fascioliasis(n=2). We analyzed the CT findings with regard to the sites and patterns of lesions in the peritoneal cavity and gastrointestinal track, as well as in other solid organs. The clinical features of these patients were also evaluated. The clinical symptoms and signs were chronic abdominal pain and general weakness in seven patients, while peripheral blood eosinophilia was observed in four. The CT features of these nine patients included multiseptated cystic masses of 2-6cm, diameter (mean 4.1±1.7cm) in the omentum or mesentery in six(67%), omental or mesenteric infiltration in seven(78%), focal peritoneal thickening in seven(78%), 1ymphadenopathy in five(56%), and ascites in four(44%). In six of the nine patients, the gastrointestinal tract(stomach in four, colon in one, both stomach and colon in one) was concomitantly involved with focal wall thickening. Branching patterns of hypoattenuating lesions were noted in the liver of three patients; two of these had hepatic fascioliasis and one had paragonimiasis. Ectopic parasitic infestation in the peritoneal cavity manifests as mass formation, adjacent gastrointestinal wall thickening, and focal peritonitis. An understanding of these image features is important for both early diagnosis and adequate treatment

Electrifying microbes for the production of chemicals

DEFF Research Database (Denmark)

Tremblay, Pier-Luc; Zhang, Tian

2015-01-01

have critical impact on the current methods of chemical synthesis. MES is a process in which electroautotrophic microbes use electrical current as electron source to reduce CO2 to multicarbon organics. Electricity necessary for MES can be harvested from renewable resources such as solar energy, wind......Powering microbes with electrical energy to produce valuable chemicals such as biofuels has recently gained traction as a biosustainable strategy to reduce our dependence on oil. Microbial electrosynthesis (MES) is one of the bioelectrochemical approaches developed in the last decade that could...... turbine, or wastewater treatment processes. The net outcome is that renewable energy is stored in the covalent bonds of organic compounds synthesized from greenhouse gas. This review will discuss the future of MES and the challenges that lie ahead for its development into a mature technology....

Visualizing conserved gene location across microbe genomes

Science.gov (United States)

Shaw, Chris D.

2009-01-01

This paper introduces an analysis-based zoomable visualization technique for displaying the location of genes across many related species of microbes. The purpose of this visualizatiuon is to enable a biologist to examine the layout of genes in the organism of interest with respect to the gene organization of related organisms. During the genomic annotation process, the ability to observe gene organization in common with previously annotated genomes can help a biologist better confirm the structure and function of newly analyzed microbe DNA sequences. We have developed a visualization and analysis tool that enables the biologist to observe and examine gene organization among genomes, in the context of the primary sequence of interest. This paper describes the visualization and analysis steps, and presents a case study using a number of Rickettsia genomes.

Strategies for creating antifouling surfaces using selfassembled poly(ethylene glycol) thiol molecules

DEFF Research Database (Denmark)

Lokanathan, Arcot R.

2011-01-01

of microbial species, but then the environment is also teeming with pathogenic microbes that pose serious threat to human health. Hence the success of human survival not only depends on exploiting the useful microbes but also on our ability to defend ourselves against the pathogenic ones. Microbes...... have substantial impact on human health, as many bacterial infections are caused by or involve biofilms. Biofilm infections are for example often associated with medical implants, as artificial surfaces in the human body provide a safe haven where biofilms can form. The food industry daily combats...... polymers for making non-adhesive coatings. The work presented in this thesis involves grafting PEG chains onto surfaces using different modifications of the ‘grafting to’ technique. The main aim of studies presented in this thesis was to develop surfaces which would prevent bacteria from forming biofilm...

Diversity and community structure of marine microbes around the Benham Rise underwater plateau, northeastern Philippines.

Science.gov (United States)

Gajigan, Andrian P; Yñiguez, Aletta T; Villanoy, Cesar L; San Diego-McGlone, Maria Lourdes; Jacinto, Gil S; Conaco, Cecilia

2018-01-01

Microbes are central to the structuring and functioning of marine ecosystems. Given the remarkable diversity of the ocean microbiome, uncovering marine microbial taxa remains a fundamental challenge in microbial ecology. However, there has been little effort, thus far, to describe the diversity of marine microorganisms in the region of high marine biodiversity around the Philippines. Here, we present data on the taxonomic diversity of bacteria and archaea in Benham Rise, Philippines, Western Pacific Ocean, using 16S V4 rRNA gene sequencing. The major bacterial and archaeal phyla identified in the Benham Rise are Proteobacteria, Cyanobacteria, Actinobacteria, Bacteroidetes, Marinimicrobia, Thaumarchaeota and, Euryarchaeota. The upper mesopelagic layer exhibited greater microbial diversity and richness compared to surface waters. Vertical zonation of the microbial community is evident and may be attributed to physical stratification of the water column acting as a dispersal barrier. Canonical Correspondence Analysis (CCA) recapitulated previously known associations of taxa and physicochemical parameters in the environment, such as the association of oligotrophic clades with low nutrient surface water and deep water clades that have the capacity to oxidize ammonia or nitrite at the upper mesopelagic layer. These findings provide foundational information on the diversity of marine microbes in Philippine waters. Further studies are warranted to gain a more comprehensive picture of microbial diversity within the region.

Microform-related community patterns of methane-cycling microbes in boreal Sphagnum bogs are site specific.

Science.gov (United States)

Juottonen, Heli; Kotiaho, Mirkka; Robinson, Devin; Merilä, Päivi; Fritze, Hannu; Tuittila, Eeva-Stiina

2015-09-01

Vegetation and water table are important regulators of methane emission in peatlands. Microform variation encompasses these factors in small-scale topographic gradients of dry hummocks, intermediate lawns and wet hollows. We examined methane production and oxidization among microforms in four boreal bogs that showed more variation of vegetation within a bog with microform than between the bogs. Potential methane production was low and differed among bogs but not consistently with microform. Methane oxidation followed water table position with microform, showing higher rates closer to surface in lawns and hollows than in hummocks. Methanogen community, analysed by mcrA terminal restriction fragment length polymorphism and dominated by Methanoregulaceae or 'Methanoflorentaceae', varied strongly with bog. The extent of microform-related variation of methanogens depended on the bog. Methanotrophs identified as Methylocystis spp. in pmoA denaturing gradient gel electrophoresis similarly showed effect of bog, and microform patterns were stronger within individual bogs. Our results suggest that methane-cycling microbes in boreal Sphagnum bogs with seemingly uniform environmental conditions may show strong site-dependent variation. The bog-intrinsic factor may be related to carbon availability but contrary to expectations appears to be unrelated to current surface vegetation, calling attention to the origin of carbon substrates for microbes in bogs. © FEMS 2015. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Impacts of human-related practices on Ommatissus lybicus infestations of date palm in Oman.

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Khalifa M Al-Kindi

Full Text Available Date palm cultivation is economically important in the Sultanate of Oman, with significant financial investments coming from both the government and private individuals. However, a widespread Dubas bug (DB (Ommatissus lybicus Bergevin infestation has impacted regions including the Middle East, North Africa, Southeast Russia, and Spain, resulting in widespread damages to date palms. In this study, techniques in spatial statistics including ordinary least squares (OLS, geographically weighted regression (GRW, and exploratory regression (ER were applied to (a model the correlation between DB infestations and human-related practices that include irrigation methods, row spacing, palm tree density, and management of undercover and intercropped vegetation, and (b predict the locations of future DB infestations in northern Oman. Firstly, we extracted row spacing and palm tree density information from remote sensed satellite images. Secondly, we collected data on irrigation practices and management by using a simple questionnaire, augmented with spatial data. Thirdly, we conducted our statistical analyses using all possible combinations of values over a given set of candidate variables using the chosen predictive modelling and regression techniques. Lastly, we identified the combination of human-related practices that are most conducive to the survival and spread of DB. Our results show that there was a strong correlation between DB infestations and several human-related practices parameters (R2 = 0.70. Variables including palm tree density, spacing between trees (less than 5 x 5 m, insecticide application, date palm and farm service (pruning, dethroning, remove weeds, and thinning, irrigation systems, offshoots removal, fertilisation and labour (non-educated issues, were all found to significantly influence the degree of DB infestations. This study is expected to help reduce the extent and cost of aerial and ground sprayings, while facilitating the

Histamine as an emergent indoor contaminant: Accumulation and persistence in bed bug infested homes.

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DeVries, Zachary C; Santangelo, Richard G; Barbarin, Alexis M; Schal, Coby

2018-01-01

Histamine is used in bronchial and dermal provocation, but it is rarely considered an environmental risk factor in allergic disease. Because bed bugs defecate large amounts of histamine as a component of their aggregation pheromone, we sought to determine if histamine accumulates in household dust in bed bug infested homes, and the effects of bed bug eradication with spatial heat on histamine levels in dust. We collected dust in homes and analyzed for histamine before, and up to three months after bed bug eradication. Histamine levels in bed bug infested homes were remarkably high (mean = 54.6±18.9 μg/100 mg of sieved household dust) and significantly higher than in control homes not infested with bed bugs (mean emergent contaminant and pose a serious health risk in the indoor environment.

Infestation of Phaseolus Vulgaris (L) by the beanfly Ophiomyia Spp. (Diptera: Agromyzidae) and Its Management by Cultural Practices

International Nuclear Information System (INIS)

Kayitare, Joseph Sibomana

1993-04-01

Cultural practices as management strategy for bean fly control were examined over four cropping seasons in 1991 and 1992 under farmer’s developed field conditions at Oyugis, in Homa Bay District of Western Kenya. In many parts of East and Central Africa, the bean fly is a major constraint to the production of the bean crop (Phaseolus vulgaris), its incidence causes yield losses averaging 47-87%, Control methods used against the pest are mostly insecticides based. Cultural control as a pest management strategy is a less considered area of research which needs to be studied, since it is the first line of defence against pest populations and results in little or no added cost. For this reason studies on five cultural practices (soil fertility, inter cropping, weeding regimes, plant spacing and planting time) on bean fly infestation were undertaken as possible control methods, Increase in nitrogen levels increased bean fly infestation by 12-66%. Phosphorus served as catalyst for nitrogen assimilation. The fertilized plants were more succulent, tender and had more nutrients and therefore offered better conditions for bean fly penetration into bean stems, fecundity and development. However, the infested plants in fertilized soils were able to compensate for the damage caused to them and grew quickly to pass the critical stages. Thus the bean fly infestation had little effect on grain yield. The effect of bean fly infestation on yield when no nitrogen and phosphorus were applied, was a 48% reduction in yield, Therefore, the use of nitrogen and phosphorus fertilizers reduced the effect of bean fly damage and increased grain yield. Inter cropping increased bean fly infestation compared to pure stands of beans. The micro climatic conditions (light intensity, temperature and relative humidity) created by inter cropping of beans with maize increased bean fly infestation compared to that in the bean mono crop. Weeding regimes had no effect on bean fly infestation, however

Tolerance of different rice genotypes (oryza sativa l.) against the infestation of rice stem borers under natural field conditions

International Nuclear Information System (INIS)

Sarwar, M.; Ahmad, N.; Nasrullah; Tofique, M.

2010-01-01

The present studies report the genotypic responses of 61 rice (Oryza sativa L.) genotypes (35 aromatic and 26 non aromatic) against the infestation of rice stem borers under natural field conditions. The data obtained on these genotypes on larval infestation in combination with yield were the criteria to assess the resistance depicted by them. The studies showed that among aromatic genotypes, 'Khushboo-95' gave the best yield of grain and harboured the least pest infestation (2.81% dead hearts and 1.85% white heads); on the other hand variety 'Sonahri Sugdasi (P)' harboured the highest borers attack (10.37% and 19.30%) and yielded the lowest grain yield. Regarding non-aromatic genotypes, IR8-2.5-11 received least infestation (1.32% and 0.26% dead hearts and white heads, respectively) generating highest yield showing its tolerance to borer's attack, in contrast, genotype IR6-252 harboured the highest infestation (5.65%, 4.28%) and yielded minimum grain indicating its susceptibility. These results demonstrate the expression of resistance gene in the genome of tolerant rice genotypes that can provide season-long protection from the natural infestation of insect pests. (author)

Efficacy of a novel oral formulation of sarolaner (Simparica™) against five common tick species infesting dogs in the United States.

Science.gov (United States)

Six, Robert H; Everett, William R; Young, David R; Carter, Lori; Mahabir, Sean P; Honsberger, Nicole A; Myers, Melanie R; Holzmer, Susan; Chapin, Sara; Rugg, Jady J

2016-05-30

The efficacy of a single oral treatment with sarolaner (Simparica™, Zoetis), a novel isoxazoline compound, was evaluated against five tick species known to infest dogs in the United States. A total of 10 laboratory studies, two against each species, were conducted using adult purpose-bred mongrels or Beagle dogs. In each study, 16 dogs were randomly allocated to one of two treatment groups based on pre-treatment host-suitability tick counts. Dogs were infested with approximately 50 unfed adult Amblyomma americanum, Amblyomma maculatum, Dermacentor variabilis, Ixodes scapularis or Rhipicephalus sanguineus ticks on Days -2, 5, 12, 19, 26 and 33. On Day 0, dogs were treated with a placebo or a sarolaner tablet providing a minimum dose of 2 mg/kg. Tick counts were conducted 48h after treatment and after each subsequent weekly re-infestation. There were no treatment-related adverse reactions during any of the studies. Dogs in the placebo-treated group maintained tick infestations throughout the studies. Geometric mean live tick counts were significantly lower (P≤0.0001) in the sarolaner-treated group compared to the tick counts in the placebo group at all timepoints. Treatment with sarolaner resulted in ≥99.6% efficacy against existing infestations of all five tick species within 48h. The efficacy against weekly post-treatment re-infestations of all tick species was ≥96.9% for at least 35 days after treatment. Thus, a single dose of sarolaner administered orally at the minimum dosage of 2mg/kg, resulted in excellent efficacy within 48h against existing tick infestations, and against weekly re-infestations for 35 days after treatment. These studies confirmed that administration of the minimum dose of sarolaner will provide rapid treatment of existing infestations and give at least one month of control against re-infestation by the common tick species affecting dogs in the US. Copyright © 2016 The Authors. Published by Elsevier B.V. All rights reserved.

Microbes on a Bottle: Substrate, Season and Geography Influence Community Composition of Microbes Colonizing Marine Plastic Debris.

Science.gov (United States)

Oberbeckmann, Sonja; Osborn, A Mark; Duhaime, Melissa B

2016-01-01

Plastic debris pervades in our oceans and freshwater systems and the potential ecosystem-level impacts of this anthropogenic litter require urgent evaluation. Microbes readily colonize aquatic plastic debris and members of these biofilm communities are speculated to include pathogenic, toxic, invasive or plastic degrading-species. The influence of plastic-colonizing microorganisms on the fate of plastic debris is largely unknown, as is the role of plastic in selecting for unique microbial communities. This work aimed to characterize microbial biofilm communities colonizing single-use poly(ethylene terephthalate) (PET) drinking bottles, determine their plastic-specificity in contrast with seawater and glass-colonizing communities, and identify seasonal and geographical influences on the communities. A substrate recruitment experiment was established in which PET bottles were deployed for 5-6 weeks at three stations in the North Sea in three different seasons. The structure and composition of the PET-colonizing bacterial/archaeal and eukaryotic communities varied with season and station. Abundant PET-colonizing taxa belonged to the phylum Bacteroidetes (e.g. Flavobacteriaceae, Cryomorphaceae, Saprospiraceae-all known to degrade complex carbon substrates) and diatoms (e.g. Coscinodiscophytina, Bacillariophytina). The PET-colonizing microbial communities differed significantly from free-living communities, but from particle-associated (>3 μm) communities or those inhabiting glass substrates. These data suggest that microbial community assembly on plastics is driven by conventional marine biofilm processes, with the plastic surface serving as raft for attachment, rather than selecting for recruitment of plastic-specific microbial colonizers. A small proportion of taxa, notably, members of the Cryomorphaceae and Alcanivoraceae, were significantly discriminant of PET but not glass surfaces, conjuring the possibility that these groups may directly interact with the PET

Microbes on a Bottle: Substrate, Season and Geography Influence Community Composition of Microbes Colonizing Marine Plastic Debris

Science.gov (United States)

Osborn, A. Mark

2016-01-01

Plastic debris pervades in our oceans and freshwater systems and the potential ecosystem-level impacts of this anthropogenic litter require urgent evaluation. Microbes readily colonize aquatic plastic debris and members of these biofilm communities are speculated to include pathogenic, toxic, invasive or plastic degrading-species. The influence of plastic-colonizing microorganisms on the fate of plastic debris is largely unknown, as is the role of plastic in selecting for unique microbial communities. This work aimed to characterize microbial biofilm communities colonizing single-use poly(ethylene terephthalate) (PET) drinking bottles, determine their plastic-specificity in contrast with seawater and glass-colonizing communities, and identify seasonal and geographical influences on the communities. A substrate recruitment experiment was established in which PET bottles were deployed for 5–6 weeks at three stations in the North Sea in three different seasons. The structure and composition of the PET-colonizing bacterial/archaeal and eukaryotic communities varied with season and station. Abundant PET-colonizing taxa belonged to the phylum Bacteroidetes (e.g. Flavobacteriaceae, Cryomorphaceae, Saprospiraceae—all known to degrade complex carbon substrates) and diatoms (e.g. Coscinodiscophytina, Bacillariophytina). The PET-colonizing microbial communities differed significantly from free-living communities, but from particle-associated (>3 μm) communities or those inhabiting glass substrates. These data suggest that microbial community assembly on plastics is driven by conventional marine biofilm processes, with the plastic surface serving as raft for attachment, rather than selecting for recruitment of plastic-specific microbial colonizers. A small proportion of taxa, notably, members of the Cryomorphaceae and Alcanivoraceae, were significantly discriminant of PET but not glass surfaces, conjuring the possibility that these groups may directly interact with the

Microbes on a Bottle: Substrate, Season and Geography Influence Community Composition of Microbes Colonizing Marine Plastic Debris.

Directory of Open Access Journals (Sweden)

Sonja Oberbeckmann

Full Text Available Plastic debris pervades in our oceans and freshwater systems and the potential ecosystem-level impacts of this anthropogenic litter require urgent evaluation. Microbes readily colonize aquatic plastic debris and members of these biofilm communities are speculated to include pathogenic, toxic, invasive or plastic degrading-species. The influence of plastic-colonizing microorganisms on the fate of plastic debris is largely unknown, as is the role of plastic in selecting for unique microbial communities. This work aimed to characterize microbial biofilm communities colonizing single-use poly(ethylene terephthalate (PET drinking bottles, determine their plastic-specificity in contrast with seawater and glass-colonizing communities, and identify seasonal and geographical influences on the communities. A substrate recruitment experiment was established in which PET bottles were deployed for 5-6 weeks at three stations in the North Sea in three different seasons. The structure and composition of the PET-colonizing bacterial/archaeal and eukaryotic communities varied with season and station. Abundant PET-colonizing taxa belonged to the phylum Bacteroidetes (e.g. Flavobacteriaceae, Cryomorphaceae, Saprospiraceae-all known to degrade complex carbon substrates and diatoms (e.g. Coscinodiscophytina, Bacillariophytina. The PET-colonizing microbial communities differed significantly from free-living communities, but from particle-associated (>3 μm communities or those inhabiting glass substrates. These data suggest that microbial community assembly on plastics is driven by conventional marine biofilm processes, with the plastic surface serving as raft for attachment, rather than selecting for recruitment of plastic-specific microbial colonizers. A small proportion of taxa, notably, members of the Cryomorphaceae and Alcanivoraceae, were significantly discriminant of PET but not glass surfaces, conjuring the possibility that these groups may directly interact

Growth analysis of cotton crops infested with spider mites. I. Light interception and radiation-use efficiency

International Nuclear Information System (INIS)

Sadras, V.O.; Wilson, L.J.

1997-01-01

Two-spotted spider mites (Tetranychus urticae Koch) are important pests of cotton (Gossypium hirsutum L.). The effects of mites on cotton photosynthesis have been investigated at the leaf and cytological level but not at the canopy level. Our objective was to quantify the effects of timing and intensity of infestation by mites on cotton radiation-use efficiency (RUE). Leaf area, light interception, RUE, canopy temperature, and leaf nitrogen concentration (LNC) were assessed during two growing seasons in crops artificially infested with mites between 59 and 127 d after sowing. Normal and okra-leaf cultivars were compared. A mite index (MI = natural log of the area under the curve of mite number vs thermal time) was used to quantify the cumulative effects of mites on RUE, LNC, and canopy temperature. Crop growth reduction due to mites was greater in early- than in late-infested crops Growth reduction was primarily due to reductions in RUE, but in the more severe treatments accelerated leaf senescence and, hence. reduced light interception also contributed to reductions in crop growth. At a given date, infested okra-leaf crops usually had greater RUE than their normal-leaf counterparts. Both plant types, however. responded similarly to a given level of mite infestation. The ability of the okra-leaf cultivar to maintain greater RUE levels can be attributed. therefore, to its relative inhospitality for the development of mite colonies rather than to an intrinsically greater capacity to maintain photosynthesis under mite damage. Canopy temperature, LNC, and RUE showed a similar, biphasic pattern of response to Ml. In the first phase, response variables were almost unaffected by mites. In the second phase, there was a marked decline in RUE and LNC and a marked increase in canopy temperature with increasing MI. These results suggest (i) some degree of compensatory photosynthesis at low to moderate levels of mite infestation, and (ii) reductions in RUE of mite-infested

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characteristics. Biopesticides were ... These biologically active factors exhibit the property to re .... soil microbes, such as phenazine-type antibiotics or hydrogen .... nematodes, M. incognita infestation and growth of tomato ..... Eucalyptus,.

Effect of a herbal compound for treatment of sarcoptic mange infestations on dogs.

Science.gov (United States)

Das, S S

1996-06-01

Charmil gel, a herbal product was tried against Sarcoptes scabei var canis on dogs and its efficacy was compared with that of amitraz. Mite scrapings examined at scheduled intervals after the topical application of Charmil gel caused complete recovery after 14 days in severe infestation and 7 to 10 days in mild to moderate infestations with regrowth of hair on Day 28 post-treatment. No adverse reactions were observed except mild irritation and restlessness, which persisted for a few hours soon after application.

Electrifying microbes for the production of chemicals

Directory of Open Access Journals (Sweden)

Pier-Luc eTremblay

2015-03-01

Full Text Available Powering microbes with electrical energy to produce valuable chemicals such as biofuels has recently gained traction as a biosustainable strategy to reduce our dependence on oil. Microbial electrosynthesis (MES is one of the bioelectrochemical approaches developed in the last decade that could have critical impact on the current methods of chemical synthesis. MES is a process in which electroautotrophic microbes use electrical current as electron source to reduce CO2 to multicarbon organics. Electricity necessary for MES can be harvested from renewable resources such as solar energy, wind turbine or wastewater treatment processes. The net outcome is that renewable energy is stored in the covalent bonds of organic compounds synthesized from greenhouse gas. This review will discuss the future of MES and the challenges that lie ahead for its development into a mature technology.

Busting dust: from cosmic grains to terrestrial microbes

International Nuclear Information System (INIS)

Mendis, D.A.

2001-01-01

Electrostatic charging can have important consequences for both the growth and disruption of microparticulates immersed in a plasma. In this topical review, my emphasis is on the latter process, while I extend the term microparticulates not only to include ordinary inanimate cosmic or terrestrial dust but also to include terrestrial microbes whose sizes range from tens of nanometers (viruses) to tens of micrometers (bacteria). Following a description of the basic mechanism of electrostatic disruption of a solid body, I will discuss the role of size, shape and surface irregularity on the process. I will also consider the mitigating role of electric field emission of electrons on the disruption process of a negatively charged grain as its size falls below a critical size. I will conclude by reviewing some early evidence for the electrostatic disruption of cosmic grains, and the very recent evidence for the electrostatic disruption of the bacterial cell membranes in terrestrial sterilization experiments. (orig.)

Delusional infestation with unusual pathogens: a report of three cases.

Science.gov (United States)

Dewan, P; Miller, J; Musters, C; Taylor, R E; Bewley, A P

2011-10-01

Delusional infestation (DI) is a psychiatric disorder characterized by a fixed, false belief that the patient is infested with extracorporeal agents. It is known by several names, including the more commonly used term 'delusional parasitosis'. The psychiatric disease is responsible for the cutaneous pathology. About 90% of patients with DI seek help from dermatologists, and most reject psychiatric referral. Thus, effective management requires incorporation of psychiatric principles. We report three cases of DI with inanimate materials, and examine 'Morgellons' disease. We believe that patients with unusual presentations of DI are likely to be seen more commonly in the future. These patients appear to be a subgroup of DI, and may be even more difficult to treat than other patients with DI. © The Author(s). CED © 2011 British Association of Dermatologists.

Host-microbe interactions in the gut of Drosophila melanogaster

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Takayuki eKuraishi

2013-12-01

Full Text Available Many insect species subsist on decaying and contaminated matter and are thus exposed to large quantities of microorganisms. To control beneficial commensals and combat infectious pathogens, insects must be armed with efficient systems for microbial recognition, signaling pathways, and effector molecules. The molecular mechanisms regulating these host-microbe interactions in insects have been largely clarified in Drosophila melanogaster with its powerful genetic and genomic tools. Here we review recent advances in this field, focusing mainly on the relationships between microbes and epithelial cells in the intestinal tract where the host exposure to the external environment is most frequent.

Planetary protection protecting earth and planets against alien microbes

International Nuclear Information System (INIS)

Leys, N.

2006-01-01

Protecting Earth and planets against the invasion of 'alien life forms' is not military science fiction, but it is the peaceful daily job of engineers and scientists of space agencies. 'Planetary Protection' is preventing microbial contamination of both the target planet and the Earth when sending robots on interplanetary space mission. It is important to preserve the 'natural' conditions of other planets and to not bring with robots 'earthly microbes' (forward contamination) when looking for 'spores of extra terrestrial life'. The Earth and its biosphere must be protected from potential extraterrestrial biological contamination when returning samples of other planets to the Earth (backward contamination). The NASA-Caltech Laboratory for Planetary Protection of Dr. Kasthuri Venkateswaran at the Jet Propulsion Laboratory (JPL) (California, USA) routinely monitors and characterizes the microbes of NASA spacecraft assembly rooms and space robots prior to flight. They have repeatedly isolated Cupriavidus and Ralstonia strains pre-flight from spacecraft assembly rooms (floor and air) and surfaces of space robots such as the Mars Odyssey Orbiter (La Duc et al., 2003). Cupriavidus and Ralstonia strains have also been found in-flight, in ISS cooling water and Shuttle drinking water (Venkateswaran et al., Pyle et al., Ott et al., all unpublished). The main objective of this study is to characterise the Cupriavidus and Ralstonia strains isolated at JPL and compare them to the Cupriavidus metallidurans CH34T model strain, isolated from a Belgian contaminated soil and studied since 25 years at SCK-CEN and to enhance our knowledge by performing additional tests at JPL and gathering information regarding the environmental conditions and the cleaning and isolation methods used in such spacecraft assembling facilities

Expanding Single Particle Mass Spectrometer Analyses for the Identification of Microbe Signatures in Sea Spray Aerosol.

Science.gov (United States)

Sultana, Camille M; Al-Mashat, Hashim; Prather, Kimberly A

2017-10-03

Ocean-derived microbes in sea spray aersosol (SSA) have the potential to influence climate and weather by acting as ice nucleating particles in clouds. Single particle mass spectrometers (SPMSs), which generate in situ single particle composition data, are excellent tools for characterizing aerosols under changing environmental conditions as they can provide high temporal resolution and require no sample preparation. While SPMSs have proven capable of detecting microbes, these instruments have never been utilized to definitively identify aerosolized microbes in ambient sea spray aersosol. In this study, an aerosol time-of-flight mass spectrometer was used to analyze laboratory generated SSA produced from natural seawater in a marine aerosol reference tank. We present the first description of a population of biological SSA mass spectra (BioSS), which closely match the ion signatures observed in previous terrestrial microbe studies. The fraction of BioSS dramatically increased in the largest supermicron particles, consistent with field and laboratory measurements of microbes ejected by bubble bursting, further supporting the assignment of BioSS mass spectra as microbes. Finally, as supported by analysis of inorganic ion signals, we propose that dry BioSS particles have heterogeneous structures, with microbes adhered to sodium chloride nodules surrounded by magnesium-enriched coatings. Consistent with this structure, chlorine-containing ion markers were ubiquitous in BioSS spectra and identified as possible tracers for distinguishing recently aerosolized marine from terrestrial microbes.

Importance of husk covering on field infestation of maize by ...

African Journals Online (AJOL)

STORAGESEVER

2008-10-20

Oct 20, 2008 ... An experiment was conducted to determine the importance of husk covering on field infestation of maize by the maize ... high yielding plants with no consideration for resistance ..... provided financial support for the study.

Skin infections and infestations in prison inmates.

Science.gov (United States)

Oninla, Olumayowa A; Onayemi, Olaniyi

2012-02-01

Skin infections and infestations are common in a prison environment. The prison is in dynamic equilibrium with the larger society. Hence, it serves as a reservoir of infections which can spread to the larger society. The study sets out to find out how rampant these infections might be in the prison and the factors responsible. Inmates at a Nigerian prison in Ilesha, Osun State, were examined for skin infections. Personal hygiene and living conditions were critically examined. The overall prevalent rate of infectious dermatoses was 49.2% (150/305). There were 178 infections. Dermatophytes accounted for 64%, pityriasis versicolor 27%, bacterial infections 3.4%, and others 5.6%. Only frequency of soap use and accommodation arrangement significantly contributed to the overall prevalence. However, infectious dermatoses were significantly affected by prison status (PP = 0.04), frequency of bath (PP = 0.025), changing of clothing (PP = 0.05), accommodation arrangement (P = 0.0001), frequency of soap usage (P = 0.005), and toilet facility (P = 0.001). The HIV status of the inmates was unknown. Hence, effect of HIV infection cannot be ascertained. Skin infections and infestations are common in prison. A change in living conditions and personal hygiene will definitely help in reducing these infections. © 2012 The International Society of Dermatology.

Macrophage–Microbe Interactions: Lessons from the Zebrafish Model

Directory of Open Access Journals (Sweden)

Nagisa Yoshida

2017-12-01

Full Text Available Macrophages provide front line defense against infections. The study of macrophage–microbe interplay is thus crucial for understanding pathogenesis and infection control. Zebrafish (Danio rerio larvae provide a unique platform to study macrophage–microbe interactions in vivo, from the level of the single cell to the whole organism. Studies using zebrafish allow non-invasive, real-time visualization of macrophage recruitment and phagocytosis. Furthermore, the chemical and genetic tractability of zebrafish has been central to decipher the complex role of macrophages during infection. Here, we discuss the latest developments using zebrafish models of bacterial and fungal infection. We also review novel aspects of macrophage biology revealed by zebrafish, which can potentiate development of new therapeutic strategies for humans.

Natural products from microbes associated with insects

DEFF Research Database (Denmark)

Beemelmanns, Christine; Guo, Huijuan; Rischer, Maja

2016-01-01

Here we review discoveries of secondary metabolites from microbes associated with insects. We mainly focus on natural products, where the ecological role has been at least partially elucidated, and/or the pharmaceutical properties evaluated, and on compounds with unique structural features. We...

Eco-bio-social determinants for house infestation by non-domiciliated Triatoma dimidiata in the Yucatan Peninsula, Mexico.

Directory of Open Access Journals (Sweden)

Eric Dumonteil

Full Text Available BACKGROUND: Chagas disease is a vector-borne disease of major importance in the Americas. Disease prevention is mostly limited to vector control. Integrated interventions targeting ecological, biological and social determinants of vector-borne diseases are increasingly used for improved control. METHODOLOGY/PRINCIPAL FINDINGS: We investigated key factors associated with transient house infestation by T. dimidiata in rural villages in Yucatan, Mexico, using a mixed modeling approach based on initial null-hypothesis testing followed by multimodel inference and averaging on data from 308 houses from three villages. We found that the presence of dogs, chickens and potential refuges, such as rock piles, in the peridomicile as well as the proximity of houses to vegetation at the periphery of the village and to public light sources are major risk factors for infestation. These factors explain most of the intra-village variations in infestation. CONCLUSIONS/SIGNIFICANCE: These results underline a process of infestation distinct from that of domiciliated triatomines and may be used for risk stratification of houses for both vector surveillance and control. Combined integrated vector interventions, informed by an Ecohealth perspective, should aim at targeting several of these factors to effectively reduce infestation and provide sustainable vector control.

Comparative Proteomic Analysis of Susceptible and Resistant Rice Plants during Early Infestation by Small Brown Planthopper

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Yan Dong

2017-10-01

Full Text Available The small brown planthopper (Laodelphax striatellus Fallén, Homoptera, Delphacidae-SBPH is one of the major destructive pests of rice (Oryza sativa L.. Understanding on how rice responds to SBPH infestation will contribute to developing strategies for SBPH control. However, the response of rice plant to SBPH is poorly understood. In this study, two contrasting rice genotypes, Pf9279-4 (SBPH-resistant and 02428 (SBPH-susceptible, were used for comparative analysis of protein profiles in the leaf sheath of rice plants in responses to SBPH infestation. One hundred and thirty-two protein spots that were differentially expressed between the resistant and susceptible rice lines were identified with significant intensity differences (≥2-fold, P < 0.05 at 0, 6, and 12 h after SBPH infestation. Protein expression profile analysis in the leaf sheath of SBPH-resistant and SBPH-susceptible rice lines after SBPH infestation showed that proteins induced by SBPH feeding were involved mainly in stress response, photosynthesis, protein metabolic process, carbohydrate metabolic process, energy metabolism, cell wall-related proteins, amino acid metabolism and transcriptional regulation. Gene expression analysis of 24 differentially expressed proteins (DEPs showed that more than 50% DEPs were positively correlated with their mRNA levels. Analysis of some physiological indexes mainly involved in the removal of oxygen reactive species showed that the levels of superoxide dismutase (SOD and glutathione (GSH were considerably higher in Pf9279-4 than 02428 during SBPH infestation. The catalase (CAT activity and hydroxyl radical inhibition were lower in Pf9279-4 than 02428. Analysis of enzyme activities indicates that Pf9279-4 rice plants defend against SBPH through the activation of the pathway of the salicylic acid (SA-dependent systemic acquired resistance. In conclusion, this study provides some insights into the molecular networks involved on cellular and

Diagnosing the influence of model structure on the simulation of water, energy and carbon fluxes on bark beetle infested forests

Science.gov (United States)

Gochis, D. J.; Gutmann, E. D.; Brooks, P. D.; Reed, D. E.; Ewers, B. E.; Pendall, E.; Biederman, J. A.; Harpold, A. A.; Barnard, H. R.; Hu, J.

2011-12-01

Forest dynamics induced by insect infestation can have a significant, local impact on plant physiological regulation of water, energy and carbon fluxes. Rapid mortality succeeded by more gradually varying land cover changes are presently thought to initiate a cascade of changes to water, energy and carbon budgets at the forest stand scale. Initial model sensitivity results have suggested very strong changes in land-atmosphere exchanges of these variables. Specifically, model results from the Noah land surface model, a relatively simple model, have suggested that loss of transpiration function may result in a nearly 50% increase in seasonal soil moisture values and similar increases in runoff production for locations in the central Rocky Mountains. However, differing model structures, such as the representation of plant canopy architecture, snowpack dynamics, dynamic vegetation and hillslope hydrologic processes, may significantly confound the synthesis of results from different modeling systems. We assess the performance of new suite of model simulations from three different land surface models of differing model structures and complexity levels against a comprehensive set of field observations of land surface flux and state variables. The focus of the analysis is in diagnosing how model structure influences changes in energy, water and carbon budget partitioning prior to and following insect infestation. Specific emphasis in this presentation is placed on verifying variables that characterize top of canopy and within canopy energy and water fluxes. We conclude the presentation with a set of recommendations about the advantages and disadvantages of various model structures in their simulation of insect driven forest dynamics.

Non-pathogenic rhizobacteria interfere with the attraction of parasitoids to aphid-induced plant volatiles via jasmonic acid signalling.

Science.gov (United States)

Pineda, Ana; Soler, Roxina; Weldegergis, Berhane T; Shimwela, Mpoki M; VAN Loon, Joop J A; Dicke, Marcel

2013-02-01

Beneficial soil-borne microbes, such as mycorrhizal fungi or rhizobacteria, can affect the interactions of plants with aboveground insects at several trophic levels. While the mechanisms of interactions with herbivorous insects, that is, the second trophic level, are starting to be understood, it remains unknown how plants mediate the interactions between soil microbes and carnivorous insects, that is, the third trophic level. Using Arabidopsis thaliana Col-0 and the aphid Myzus persicae, we evaluate here the underlying mechanisms involved in the plant-mediated interaction between the non-pathogenic rhizobacterium Pseudomonas fluorescens and the parasitoid Diaeretiella rapae, by combining ecological, chemical and molecular approaches. Rhizobacterial colonization modifies the composition of the blend of herbivore-induced plant volatiles. The volatile blend from rhizobacteria-treated aphid-infested plants is less attractive to an aphid parasitoid, in terms of both olfactory preference behaviour and oviposition, than the volatile blend from aphid-infested plants without rhizobacteria. Importantly, the effect of rhizobacteria on both the emission of herbivore-induced volatiles and parasitoid response to aphid-infested plants is lost in an Arabidopsis mutant (aos/dde2-2) that is impaired in jasmonic acid production. By modifying the blend of herbivore-induced plant volatiles that depend on the jasmonic acid-signalling pathway, root-colonizing microbes interfere with the attraction of parasitoids of leaf herbivores. © 2012 Blackwell Publishing Ltd.

Study of the infestation rate of the kidney and spleen of domestic ruminants by Linguatula serrata nymphs in Urmia slaughterhouse

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S Rasouli

2009-02-01

Full Text Available In this study, the prevalence of Linguatula serrata nymphs in kidneys and spleens of 800 domestic ruminants (cattle, buffalo, sheep and goat in different sexes, ages and seasons was investigated. First, the kidneys and spleens were examined macroscopically. Then, a digestion method was also applied. Infestation rate in the spleen of cattle, buffalo, sheep and goat were %0/5, %0, %0/5 and %1/5 respectively. No infestation was found in the kidneys. The results of this study shows that the infestation of domestic ruminants to Linguatula serrat nymphs in different sexes and ages were not significant. Also the infestation rate in different seasons was not significant.

Prevalence of intestinal parasitic infestation in HIV seropositive and ...

African Journals Online (AJOL)

opportunistic parasites such as Cryptosporidium,. Cyclospora and Isospora species. It is also important to note that this report will be the first documentation on HIV/AIDS and intestinal parasites from this center. And it aims to determine the frequency and pattern of intestinal parasitic infestation, including protozoan species ...

Postharvest tillage reduces Downy Brome infestations in winter wheat

Science.gov (United States)

In the Pacific Northwest, downy brome continues to infest winter wheat producing regions especially in low-rainfall areas where the winter wheat-summer fallow rotation is the dominate production system. In Washington, a study was conducted for 2 years at each of two locations in the winter wheat -su...

Lynxacarus radovskyi mites in feral cats: a study of diagnostic methods, preferential body locations, co-infestations and prevalence.

Science.gov (United States)

Ketzis, Jennifer K; Dundas, James; Shell, Linda G

2016-10-01

Lynxacarus radovskyi (fur mites) are ectoparasites found on the hair shafts of cats living in tropical environments. Diagnosis is via microscopic examination of hairs. Various anatomical areas have been reported to harbour these mites. To assess adhesive tape impressions and trichograms for detecting L. radovskyi and co-infestations; to determine host body predilection sites and affected gender; to determine prevalence of L. radovskyi in a feral cat population. 121 feral cats in a trap, neuter and release programme. After cats were premedicated for surgical sterilization, hairs from seven to nine body sites were removed from each cat using adhesive tape impression and trichogram techniques. Samples were examined at 10-100× magnification using compound or stereo microscopes. The prevalence of L. radovskyi was 71% (86 of 121) within the feral cat population. Tape impressions identified 75 cats; trichograms identified 56 cats. There were fewer false negative results with tape impressions. Caudal body sites were more likely to be positive, with the perianal area being the most commonly affected. Males and females were infested equally. Tape impressions identified more Cheyletiella blakei infestations and both methods identified some Felicola felis infestations. Tape impressions were easier to perform and identified more L. radovskyi positive cats and more co-infestations. Hairs from the perianal area and other caudal body sites are most likely to harbour L. radovskyi. Within this feral cat population, L. radovskyi was a common infestation. © 2016 ESVD and ACVD.

Role of Blossoms in Watermelon Seed Infestation by Acidovorax avenae subsp. citrulli.

Science.gov (United States)

Walcott, R R; Gitaitis, R D; Castro, A C

2003-05-01

ABSTRACT The role of watermelon blossom inoculation in seed infestation by Acidovorax avenae subsp. citrulli was investigated. Approximately 98% (84/87) of fruit developed from blossoms inoculated with 1 x 10(7) or 1 x 10(9) CFU of A. avenae subsp. citrulli per blossom were asymptomatic. Using immunomagnetic separation and the polymerase chain reaction, A. avenae subsp. citrulli was detected in 44% of the seed lots assayed, despite the lack of fruit symptoms. Furthermore, viable colonies were recovered from 31% of the seed lots. Of these lots, 27% also yielded seedlings expressing bacterial fruit blotch symptoms when planted under conditions of 30 degrees C and 90% relative humidity. A. avenae subsp. citrulli was detected and recovered from the pulp of 33 and 19%, respectively, of symptomless fruit whose blossoms were inoculated with A. avenae subsp. citrulli. The ability to penetrate watermelon flowers was not unique to A. avenae subsp. citrulli, because blossoms inoculated with Pantoea ananatis also resulted in infested seed and pulp. The data indicate that watermelon blossoms are a potential site of ingress for fruit and seed infestation by A. avenae subsp. citrulli.

Flowers and Wild Megachilid Bees Share Microbes.

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McFrederick, Quinn S; Thomas, Jason M; Neff, John L; Vuong, Hoang Q; Russell, Kaleigh A; Hale, Amanda R; Mueller, Ulrich G

2017-01-01

Transmission pathways have fundamental influence on microbial symbiont persistence and evolution. For example, the core gut microbiome of honey bees is transmitted socially and via hive surfaces, but some non-core bacteria associated with honey bees are also found on flowers, and these bacteria may therefore be transmitted indirectly between bees via flowers. Here, we test whether multiple flower and wild megachilid bee species share microbes, which would suggest that flowers may act as hubs of microbial transmission. We sampled the microbiomes of flowers (either bagged to exclude bees or open to allow bee visitation), adults, and larvae of seven megachilid bee species and their pollen provisions. We found a Lactobacillus operational taxonomic unit (OTU) in all samples but in the highest relative and absolute abundances in adult and larval bee guts and pollen provisions. The presence of the same bacterial types in open and bagged flowers, pollen provisions, and bees supports the hypothesis that flowers act as hubs of transmission of these bacteria between bees. The presence of bee-associated bacteria in flowers that have not been visited by bees suggests that these bacteria may also be transmitted to flowers via plant surfaces, the air, or minute insect vectors such as thrips. Phylogenetic analyses of nearly full-length 16S rRNA gene sequences indicated that the Lactobacillus OTU dominating in flower- and megachilid-associated microbiomes is monophyletic, and we propose the name Lactobacillus micheneri sp. nov. for this bacterium.

Intercropping System for Protection the Potato Plant from Insect Infestation

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Aziza Sharaby

2015-06-01

Full Text Available The use of intercropping system provides an option for insect control for organic farmers that are limited in their chemical use. Additionally, intercropping systems can be attractive to conventional growers as a cost-effective insect control solution. A study was carried out for two seasons 2011-2012 and 2012-2013 to evaluate the effect of intercropping of potato (Solanum tuberosum L. with onion (Allium cepa L. on whitefly (Bemicia tabasi Gennadius and aphids’ Myzus persicae Sulz. and Aphis gossypii Glover infestation in potato fields. Results indicated that intercropping significantly reduced potato plant infestation with whitefly by 42.7, 51.3% while it was 62.69% reduction with aphids during the two successive winter seasons than when potato plants were cultivated alone. Therefore, intercropping could be recommended as a protection method of reducing pest population in the fields.

A First Report of Infestation by Pseudolynchia canariensis in a Herd of Pigeons in Shahrekord (Southwest of Iran)

Science.gov (United States)

Pirali-Kheirabadi, Khodadad; Dehghani-Samani, Amir; Ahmadi-Baberi, Nader; Najafzadeh, Vida

2016-01-01

Background: Pigeons (Columba livia) have been kept as pet and reared for food in several countries including Iran. Ectoparasites are regarded as the basic causes of retardation in growth, lowered vitality and poor conditions of the birds. Pseudolynchia canariensis a hippoboscidae fly is one of the important ectoparasites of pigeons and is responsible for the transmission of pathogens to birds and humans same as pathogenic protozoan Haemoproteus columbae. Methods: A herd of domestic pigeons contained 50 pigeons in Shahrekord, southwest Iran was evaluated clinically infested by ectoparasites. Ectoparasites were removed. The samples were collected and then referred to the Laboratory of Parasitology of Shahrekord University, Shahrekord, Iran. Results: Usin diagnostic key for diptera fly, these flies were find P. canariensis. This is a rare report of infestation of pigeons herd by P. canariensis in Iran. The infestation rate was 40% that rate of infestation in pipers was more than females and in females was more than males. Conclusion: The rate of infested pipers was more than adults that maybe the less potential of pipers in removing of ectoparasites is reason of this higher rate. PMID:27308301

A First Report of Infestation by Pseudolynchia canariensis in a Herd of Pigeons in Shahrekord (Southwest of Iran

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Khodadad Pirali-Kheirabadi

2016-01-01

Full Text Available Background: Pigeons (Columba livia have been kept as pet and reared for food in several countries including Iran. Ectoparasites are regarded as the basic causes of retardation in growth, lowered vitality and poor conditions of the birds. Pseudolynchia canariensis a hippoboscidae fly is one of the important ectoparasites of pigeons and is respon­sible for the transmission of pathogens to birds and humans same as pathogenic protozoan Haemoproteus columbae.Methods: A herd of domestic pigeons contained 50 pigeons in Shahrekord, southwest Iran was evaluated clinically infested by ectoparasites. Ectoparasites were removed. The samples were collected and then referred to the Laboratory of Parasitology of Shahrekord University, Shahrekord, Iran.Results: Usin diagnostic key for diptera fly, these flies were find P. canariensis. This is a rare report of infestation of pigeons herd by P. canariensis in Iran. The infestation rate was 40% that rate of infestation in pipers was more than females and in females was more than males.Conclusion: The rate of infested pipers was more than adults that maybe the less potential of pipers in removing of ectoparasites is reason of this higher rate.

Spatial modeling of rat bites and prediction of rat infestation in Peshawar valley using binomial kriging with logistic regression.

Science.gov (United States)

Ali, Asad; Zaidi, Farrah; Fatima, Syeda Hira; Adnan, Muhammad; Ullah, Saleem

2018-03-24

In this study, we propose to develop a geostatistical computational framework to model the distribution of rat bite infestation of epidemic proportion in Peshawar valley, Pakistan. Two species Rattus norvegicus and Rattus rattus are suspected to spread the infestation. The framework combines strengths of maximum entropy algorithm and binomial kriging with logistic regression to spatially model the distribution of infestation and to determine the individual role of environmental predictors in modeling the distribution trends. Our results demonstrate the significance of a number of social and environmental factors in rat infestations such as (I) high human population density; (II) greater dispersal ability of rodents due to the availability of better connectivity routes such as roads, and (III) temperature and precipitation influencing rodent fecundity and life cycle.

The effects of packaging materials on microbe population in irradiated traditional herbal medicines

International Nuclear Information System (INIS)

Bagiawati, Sri; Hilmy, Nazly

1983-01-01

Microbial population and moisture content of traditional herbal medicines contaminated with 3 kinds of aerobic microbes, packed in 5 kinds of plastic packaging materials, followed by irradiation at minimum dose of 5 kGy and stored for 6 months were investigated. The highest reduction of microbial counts during storage was observed on samples packed in polyethylene bags. All of packaging materials used were found to be impermeable to microbes and water vapour. Radiation and packaging materials used acted synergistically to inactivate microbes durind storage. The microbial counts decreased as much as 2 to 4 log cycles during storage. (author)

Nonribosomal Peptides from Marine Microbes and Their Antimicrobial and Anticancer Potential

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Shivankar Agrawal

2017-11-01

Full Text Available Marine environments are largely unexplored and can be a source of new molecules for the treatment of many diseases such as malaria, cancer, tuberculosis, HIV etc. The Marine environment is one of the untapped bioresource of getting pharmacologically active nonribosomal peptides (NRPs. Bioprospecting of marine microbes have achieved many remarkable milestones in pharmaceutics. Till date, more than 50% of drugs which are in clinical use belong to the nonribosomal peptide or mixed polyketide-nonribosomal peptide families of natural products isolated from marine bacteria, cyanobacteria and fungi. In recent years large numbers of nonribosomal have been discovered from marine microbes using multi-disciplinary approaches. The present review covers the NRPs discovered from marine microbes and their pharmacological potential along with role of genomics, proteomics and bioinformatics in discovery and development of nonribosomal peptides drugs.

Ionizing radiation as a phytosanitary treatment against fruit flies (Diptera: Tephritidae): Efficacy in naturally versus artificially infested fruit

Science.gov (United States)

Some phytosanitary irradiation treatments against tephritid fruit flies have been developed using artificial infestation of fruit without first comparing its effect on efficacy. In this study, efficacy was compared using infestation of grapefruit with Mexican fruit fly, Anastrepha ludens (Loew), vi...

Rabbit management and occurrences of mange mite infestations in ...

African Journals Online (AJOL)

A cross-sectional study was conducted in Morogoro Municipality between September and December 2015 to explore the rabbit farming and assess the common health problems with a focus on epidemiology of mange infestation. A total of 18 rabbit farms with 622 animals from 9 wards were investigated. A questionnaire ...

Infestation and morphological identification of the stalked epizoic barnacle Octolasmis on the blue crab Portunus pelagicus from the Red Sea

Science.gov (United States)

Afifi Khattab, Rafat

2017-09-01

The intensity of infestation of the epizoic stalked barnacle Octolasmis on the blue crab was calculated for a total of 180 individuals collected around Jeddah, the western Red Sea Saudi coast. More than 90% of the crabs were found bearing the Octolasmis at a prevalence rate of 92% and mean intensity of 18.5±18.6 (0-127 epibiont per host). The intensity of infestation increased with host size in the range 90-135 mm. Generally, females were more infested (69%) than the males (31%). Octolasmis angulata occurred mostly on the gills, and the lower side of the gill chambers was more infested (84%) than the upper side (16%) and the left side of gills was also more infested than the right side in both males and females. Further studies are still needed to examine the commensal relationship and its impact on the fishery market of the Red Sea blue crab populations.

Effect of conservation tillage and peat application on weed infestation on a clay soil

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P. VANHALA

2008-12-01

Full Text Available Amendment of soil with peat is an attempt to avoid crop yield variation in the transition to conservation tillage, as it improves seedbed conditions and crop growth in drought-sensitive clay soils. Weed infestations were compared in 1999-2000 between the original and peat-amended clay (Typic Cryaquept, very fine, illitic or mixed under different autumn tillage systems in an oats-barley rotation. In a field experiment, sphagnum peat (H = 4 had been spread (0.02 m 3 m -2 on the soil surface in August 1995. Tillage treatments included mouldboard ploughing (to 20 cm and stubble cultivations of different working depths (8 or 15 cm and intensity (once or twice. Weed biomass and density were assessed by an area of 1 m 2 per field plot in August 1999-2000 and June 2000. The 1999 season was dry, but soil moisture conditions were more favourable in 2000. Peat application tended to increase the number of volunteer oats and Chenopodium album in 1999, while decreasing Galium spurium biomass. Ploughing significantly increased the abundance of Chenopodium album and Lamium purpureum in barley (Hordeum vulgare in 1999. Weed infestation was much lower in 2000, and tillage effect on Chenopodium album was minor in oats (Avena sativa. Growth of Lamium purpureum and Fumaria officinalis was stimulated in ploughed soils both years. Intensity and working depth of stubble cultivation had no significant effect on weeds.;

Earthworms, Microbes and the Release of C and N in Biochar Amended Soil

Science.gov (United States)

Land application of biochar has the potential to increase soil fertility and sequester carbon. It is unclear how soil microbes and earthworms interact with biochar and affect release or retention of nutrients. In order to determine the effects and interactions among soil microbes, earthworms, and bi...

Wired to the roots: impact of root-beneficial microbe interactions on aboveground plant physiology and protection.

Science.gov (United States)

Kumar, Amutha Sampath; Bais, Harsh P

2012-12-01

Often, plant-pathogenic microbe interactions are discussed in a host-microbe two-component system, however very little is known about how the diversity of rhizospheric microbes that associate with plants affect host performance against pathogens. There are various studies, which specially direct the importance of induced systemic defense (ISR) response in plants interacting with beneficial rhizobacteria, yet we don't know how rhizobacterial associations modulate plant physiology. In here, we highlight the many dimensions within which plant roots associate with beneficial microbes by regulating aboveground physiology. We review approaches to study the causes and consequences of plant root association with beneficial microbes on aboveground plant-pathogen interactions. The review provides the foundations for future investigations into the impact of the root beneficial microbial associations on plant performance and innate defense responses.

Plant traits related to nitrogen uptake influence plant-microbe competition.

Science.gov (United States)

Moreau, Delphine; Pivato, Barbara; Bru, David; Busset, Hugues; Deau, Florence; Faivre, Céline; Matejicek, Annick; Strbik, Florence; Philippot, Laurent; Mougel, Christophe

2015-08-01

Plant species are important drivers of soil microbial communities. However, how plant functional traits are shaping these communities has received less attention though linking plant and microbial traits is crucial for better understanding plant-microbe interactions. Our objective was to determine how plant-microbe interactions were affected by plant traits. Specifically we analyzed how interactions between plant species and microbes involved in nitrogen cycling were affected by plant traits related to 'nitrogen nutrition in interaction with soil nitrogen availability. Eleven plant species, selected along an oligotrophic-nitrophilic gradient, were grown individually in a nitrogen-poor soil with two levels of nitrate availability. Plant traits for both carbon and nitrogen nutrition were measured and the genetic structure and abundance of rhizosphere. microbial communities, in particular the ammonia oxidizer and nitrate reducer guilds, were analyzed. The structure of the bacterial community in the rhizosphere differed significantly between plant species and these differences depended on nitrogen availability. The results suggest that the rate of nitrogen uptake per unit of root biomass and per day is a key plant trait, explaining why the effect of nitrogen availability on the structure of the bacterial community depends on the plant species. We also showed that the abundance of nitrate reducing bacteria always decreased with increasing nitrogen uptake per unit of root biomass per day, indicating that there was competition for nitrate between plants and nitrate reducing bacteria. This study demonstrates that nitrate-reducing microorganisms may be adversely affected by plants with a high nitrogen uptake rate. Our work puts forward the role of traits related to nitrogen in plant-microbe interactions, whereas carbon is commonly considered as the main driver. It also suggests that plant traits related to ecophysiological processes, such as nitrogen uptake rates, are more

Engineering tailored nanoparticles with microbes: quo vadis?

Science.gov (United States)

Prasad, Ram; Pandey, Rishikesh; Barman, Ishan

2016-01-01

In the quest for less toxic and cleaner methods of nanomaterials production, recent developments in the biosynthesis of nanoparticles have underscored the important role of microorganisms. Their intrinsic ability to withstand variable extremes of temperature, pressure, and pH coupled with the minimal downstream processing requirements provide an attractive route for diverse applications. Yet, controlling the dispersity and facile tuning of the morphology of the nanoparticles of desired chemical compositions remains an ongoing challenge. In this Focus Review, we critically review the advances in nanoparticle synthesis using microbes, ranging from bacteria and fungi to viruses, and discuss new insights into the cellular mechanisms of such formation that may, in the near future, allow complete control over particle morphology and functionalization. In addition to serving as paradigms for cost-effective, biocompatible, and eco-friendly synthesis, microbes hold the promise for a unique template for synthesis of tailored nanoparticles targeted at therapeutic and diagnostic platform technologies. © 2015 Wiley Periodicals, Inc.

The Study of the Microbes Degraded Polystyrene

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Zhi-Long Tang

2017-01-01

Full Text Available Under the observation that Tenebrio molitor and Zophobas morio could eat polystyrene (PS, we setup the platform to screen the gut microbes of these two worms. To take advantage of that Tenebrio molitor and Zophobas morio can eat and digest polystyrene as its diet, we analyzed these special microbes with PS plate and PS turbidity system with time courses. There were two strains TM1 and ZM1 which isolated from Tenebrio molitor and Zophobas morio, and were identified by 16S rDNA sequencing. The results showed that TM1 and ZM1 were cocci-like and short rod shape Gram-negative bacteria under microscope. The PS plate and turbidity assay showed that TM1 and ZM1 could utilize polystyrene as their carbon sources. The further study of PS degraded enzyme and cloning warrants our attention that this platform will be an excellent tools to explore and solve this problem.

Wars between microbes on roots and fruits [version 1; referees: 3 approved

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Ben Lugtenberg

2017-03-01

Full Text Available Microbes in nature often live in unfavorable conditions. To survive, they have to occupy niches close to food sources and efficiently utilize nutrients that are often present in very low concentrations. Moreover, they have to possess an arsenal of attack and defense mechanisms against competing bacteria. In this review, we will discuss strategies used by microbes to compete with each other in the rhizosphere and on fruits, with a focus on mechanisms of inter- and intra-species antagonism. Special attention will be paid to the recently discovered roles of volatile organic compounds. Several microbes with proven capabilities in the art of warfare are being applied in products used for the biological control of plant diseases, including post-harvest control of fruits and vegetables.

Increased gum arabic production after infestation of Acacia senegal ...

African Journals Online (AJOL)

The aim of this study was to investigate the correlation between the beetle Agrilus nubeculosus and gum arabic production by Acacia senegal. Some trees were tapped and left open to facilitate infestation by A. nubeculosus and others were covered with wire mesh as control. Gum yield, physical and chemical properties of ...

9 CFR 72.21 - Animals infested with or exposed to ticks subject to same restrictions as cattle.

Science.gov (United States)

2010-01-01

... ticks subject to same restrictions as cattle. 72.21 Section 72.21 Animals and Animal Products ANIMAL AND... (INCLUDING POULTRY) AND ANIMAL PRODUCTS TEXAS (SPLENETIC) FEVER IN CATTLE § 72.21 Animals infested with or exposed to ticks subject to same restrictions as cattle. Animals other than cattle which are infested with...

Conserved Patterns of Microbial Immune Escape: Pathogenic Microbes of Diverse Origin Target the Human Terminal Complement Inhibitor Vitronectin via a Single Common Motif.

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Teresia Hallström

Full Text Available Pathogenicity of many microbes relies on their capacity to resist innate immunity, and to survive and persist in an immunocompetent human host microbes have developed highly efficient and sophisticated complement evasion strategies. Here we show that different human pathogens including Gram-negative and Gram-positive bacteria, as well as the fungal pathogen Candida albicans, acquire the human terminal complement regulator vitronectin to their surface. By using truncated vitronectin fragments we found that all analyzed microbial pathogens (n = 13 bound human vitronectin via the same C-terminal heparin-binding domain (amino acids 352-374. This specific interaction leaves the terminal complement complex (TCC regulatory region of vitronectin accessible, allowing inhibition of C5b-7 membrane insertion and C9 polymerization. Vitronectin complexed with the various microbes and corresponding proteins was thus functionally active and inhibited complement-mediated C5b-9 deposition. Taken together, diverse microbial pathogens expressing different structurally unrelated vitronectin-binding molecules interact with host vitronectin via the same conserved region to allow versatile control of the host innate immune response.

Big Data Approaches To Coral-Microbe Symbiosis

Science.gov (United States)

Zaneveld, J.; Pollock, F. J.; McMinds, R.; Smith, S.; Payet, J.; Hanna, B.; Welsh, R.; Foster, A.; Ohdera, A.; Shantz, A. A.; Burkepile, D. E.; Maynard, J. A.; Medina, M.; Vega Thurber, R.

2016-02-01

Coral reefs face increasing challenges worldwide, threatened by overfishing and nutrient pollution, which drive growth of algal competitors of corals, and periods of extreme temperature, which drive mass coral bleaching. I will discuss two projects that examine how coral's complex relationships with microorganisms affect the response of coral colonies and coral species to environmental challenge. Microbiological studies have documented key roles for coral's microbial symbionts in energy harvest and defense against pathogens. However, the evolutionary history of corals and their microbes is little studied. As part of the Global Coral Microbiome Project, we are characterizing bacterial, archaeal, fungal, and Symbiodinium diversity across >1400 DNA samples from all major groups of corals, collected from 15 locations worldwide. This collection will allow us to ask how coral- microbe associations evolved over evolutionary time, and to determine whether microbial symbiosis helps predict the relative vulnerability of certain coral species to environmental stress. In the second project, we experimentally characterized how the long-term effects of human impacts such as overfishing and nutrient pollution influence coral-microbe symbiosis. We conducted a three-year field experiment in the Florida Keys applying nutrient pollution or simulated overfishing to reef plots, and traced the effects on reef communities, coral microbiomes, and coral health. The results show that extremes of temperature and algal competition destabilize coral microbiomes, increasing pathogen blooms, coral disease, and coral death. Surprisingly, these local stressors interacted strongly with thermal stress: the greatest microbiome disruption, and >80% of coral mortality happened in the hottest periods. Thus, overfishing and nutrient pollution may interact with increased climate-driven episodes of sub-bleaching thermal stress to increase coral mortality by disrupt reef communities down to microbial scales.

Ticks and Fleas Infestation on East Hedgehogs (Erinaceus concolor in Van Province, Eastern Region of Turkey

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Yaşar Goz

2015-10-01

Full Text Available Background: Ixodid ticks (Acari: İxodidae and fleas (Siphonaptera are the major vectors of pathogens threatening animals and human healths. The aim of our study was to detect the infestation rates of East Hedgehogs (Erinaceus concolor with ticks and fleas in Van Province, eastern region of Turkey.Methods: We examined fleas and ticks infestation patterns in 21 hedgehogs, collected from three suburbs with the greater of number gardens. In order to estimate flea and tick infestation of hedgehogs, we immobilized the ectoparasites by treatment the body with a insecticide trichlorphon (Neguvon®-Bayer.Results: On the hedgehogs, 60 ixodid ticks and 125 fleas were detected. All of the ixodid ticks were Rhipicephalus turanicus and all of the fleas were Archaeopsylla erinacei. Infestation rate for ticks and fleas was detected 66.66 % and 100 %, respectively.Conclusion: We detected ticks (R. turanicus and fleas (A. erinacei in hedgehogs at fairly high rates. Since many ticks and fleas species may harbor on hedgehogs and transmit some tick-borne and flea-borne patogens, this results are the important in terms of veterinary and public health. 

Dual oxidase in mucosal immunity and host-microbe homeostasis.

Science.gov (United States)

Bae, Yun Soo; Choi, Myoung Kwon; Lee, Won-Jae

2010-07-01

Mucosal epithelia are in direct contact with microbes, which range from beneficial symbionts to pathogens. Accordingly, hosts must have a conflicting strategy to combat pathogens efficiently while tolerating symbionts. Recent progress has revealed that dual oxidase (DUOX) plays a key role in mucosal immunity in organisms that range from flies to humans. Information from the genetic model of Drosophila has advanced our understanding of the regulatory mechanism of DUOX and its role in mucosal immunity. Further investigations of DUOX regulation in response to symbiotic or non-symbiotic bacteria and the in vivo consequences in host physiology will give a novel insight into the microbe-controlling system of the mucosa. Copyright 2010 Elsevier Ltd. All rights reserved.

Immobilization of anode-attached microbes in a microbial fuel cell.

KAUST Repository

Wagner, Rachel C

2012-01-03

Current-generating (exoelectrogenic) bacteria in bioelectrochemical systems (BESs) may not be culturable using standard in vitro agar-plating techniques, making isolation of new microbes a challenge. More in vivo like conditions are needed where bacteria can be grown and directly isolated on an electrode. While colonies can be developed from single cells on an electrode, the cells must be immobilized after being placed on the surface. Here we present a proof-of-concept immobilization approach that allows exoelectrogenic activity of cells on an electrode based on applying a layer of latex to hold bacteria on surfaces. The effectiveness of this procedure to immobilize particles was first demonstrated using fluorescent microspheres as bacterial analogs. The latex coating was then shown to not substantially affect the exoelectrogenic activity of well-developed anode biofilms in two different systems. A single layer of airbrushed coating did not reduce the voltage produced by a biofilm in a microbial fuel cell (MFC), and more easily applied dip-and-blot coating reduced voltage by only 11% in a microbial electrolysis cell (MEC). This latex immobilization procedure will enable future testing of single cells for exoelectrogenic activity on electrodes in BESs.

Immobilization of anode-attached microbes in a microbial fuel cell.

KAUST Repository

Wagner, Rachel C; Porter-Gill, Sikandar; Logan, Bruce E

2012-01-01

Current-generating (exoelectrogenic) bacteria in bioelectrochemical systems (BESs) may not be culturable using standard in vitro agar-plating techniques, making isolation of new microbes a challenge. More in vivo like conditions are needed where bacteria can be grown and directly isolated on an electrode. While colonies can be developed from single cells on an electrode, the cells must be immobilized after being placed on the surface. Here we present a proof-of-concept immobilization approach that allows exoelectrogenic activity of cells on an electrode based on applying a layer of latex to hold bacteria on surfaces. The effectiveness of this procedure to immobilize particles was first demonstrated using fluorescent microspheres as bacterial analogs. The latex coating was then shown to not substantially affect the exoelectrogenic activity of well-developed anode biofilms in two different systems. A single layer of airbrushed coating did not reduce the voltage produced by a biofilm in a microbial fuel cell (MFC), and more easily applied dip-and-blot coating reduced voltage by only 11% in a microbial electrolysis cell (MEC). This latex immobilization procedure will enable future testing of single cells for exoelectrogenic activity on electrodes in BESs.

Winter Survival of Individual Honey Bees and Honey Bee Colonies Depends on Level of Varroa destructor Infestation

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van Dooremalen, Coby; Gerritsen, Lonne; Cornelissen, Bram; van der Steen, Jozef J. M.; van Langevelde, Frank; Blacquière, Tjeerd

2012-01-01

Background Recent elevated winter loss of honey bee colonies is a major concern. The presence of the mite Varroa destructor in colonies places an important pressure on bee health. V. destructor shortens the lifespan of individual bees, while long lifespan during winter is a primary requirement to survive until the next spring. We investigated in two subsequent years the effects of different levels of V. destructor infestation during the transition from short-lived summer bees to long-lived winter bees on the lifespan of individual bees and the survival of bee colonies during winter. Colonies treated earlier in the season to reduce V. destructor infestation during the development of winter bees were expected to have longer bee lifespan and higher colony survival after winter. Methodology/Principal Findings Mite infestation was reduced using acaricide treatments during different months (July, August, September, or not treated). We found that the number of capped brood cells decreased drastically between August and November, while at the same time, the lifespan of the bees (marked cohorts) increased indicating the transition to winter bees. Low V. destructor infestation levels before and during the transition to winter bees resulted in an increase in lifespan of bees and higher colony survival compared to colonies that were not treated and that had higher infestation levels. A variety of stress-related factors could have contributed to the variation in longevity and winter survival that we found between years. Conclusions/Significance This study contributes to theory about the multiple causes for the recent elevated colony losses in honey bees. Our study shows the correlation between long lifespan of winter bees and colony loss in spring. Moreover, we show that colonies treated earlier in the season had reduced V. destructor infestation during the development of winter bees resulting in longer bee lifespan and higher colony survival after winter. PMID:22558421

Exuberant granulation tissue response associated with Neobenedenia sp. (Monogenea: Capsalidae) infestation in two cobia, Rachycentron canadum (Linnaeus).

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Hurley-Sanders, J; Harms, C; Christiansen, E; Clarke, E; Law, J

2016-03-01

Monogenean parasite infestations are common in captive marine teleosts, and are generally found on the skin and gills. This report describes an unusual pathological presentation of exuberant granulation tissue of the gills, suspected to be related to Neobenedenia infestation in two cobia housed together at a North Carolina aquarium. © 2015 John Wiley & Sons Ltd.

Aboveground Whitefly Infestation Modulates Transcriptional Levels of Anthocyanin Biosynthesis and Jasmonic Acid Signaling-Related Genes and Augments the Cope with Drought Stress of Maize.

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Yong-Soon Park

Full Text Available Up to now, the potential underlying molecular mechanisms by which maize (Zea mays L. plants elicit defense responses by infestation with a phloem feeding insect whitefly [Bemisia tabaci (Genn.] have been barely elucidated against (abiotic stresses. To fill this gap of current knowledge maize plants were infested with whitefly and these plants were subsequently assessed the levels of water loss. To understand the mode of action, plant hormone contents and the stress-related mRNA expression were evaluated. Whitefly-infested maize plants did not display any significant phenotypic differences in above-ground tissues (infested site compared with controls. By contrast, root (systemic tissue biomass was increased by 2-fold by whitefly infestation. The levels of endogenous indole-3-acetic acid (IAA, jasmonic acid (JA, and hydrogen peroxide (H2O2 were significantly higher in whitefly-infested plants. The biosynthetic or signaling-related genes for JA and anthocyanins were highly up-regulated. Additionally, we found that healthier plants were obtained in whitefly-infested plants under drought conditions. The weight of whitefly-infested plants was approximately 20% higher than that of control plants at 14 d of drought treatment. The drought tolerance-related genes, ZmbZIP72, ZmSNAC1, and ZmABA1, were highly expressed in the whitefly-infected plants. Collectively, our results suggest that IAA/JA-derived maize physiological changes and correlation of H2O2 production and water loss are modulated by above-ground whitefly infestation in maize plants.

Charring does not affect wood infestation by subterranean termites

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C.J. Peterson; P.D. Gerard; T.L. Wagner

2007-01-01

Fire is an important part of forest ecosystems, as is the insect fauna. Changes in wood brought aboutby fire may alter the ability of termites to use the wood, interrupting the decay cycle of woody debris.The ability of termites to find, infest, and feed upon wood after it had been charred was evaluated in

Does the removal of mite-infested brood facilitate grooming?

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The relationship between the removal of mite-infested brood and mite drop was compared using Russian (RHB, n = 9) and Italian (IHB, n = 9) honey bee colonies. A cloake board was used to isolate test brood frame on the top hive body and the metal sheet served as a varroa trap. Inoculum mites were col...

Rarity in aquatic microbes: placing protists on the map.

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Logares, Ramiro; Mangot, Jean-François; Massana, Ramon

2015-12-01

Most microbial richness at any given time tends to be represented by low-abundance (rare) taxa, which are collectively referred to as the "rare biosphere". Here we review works on the rare biosphere using high-throughput sequencing (HTS), with a particular focus on unicellular eukaryotes or protists. Evidence thus far indicates that the rare biosphere encompasses dormant as well as metabolically active microbes that could potentially play key roles in ecosystem functioning. Rare microbes appear to have biogeography, and sometimes the observed patterns can be similar to what is observed among abundant taxa, suggesting similar community-structuring mechanisms. There is limited evidence indicating that the rare biosphere contains taxa that are phylogenetically distantly related to abundant counterparts; therefore, the rare biosphere may act as a reservoir of deep-branching phylogenetic diversity. The potential role of the rare biosphere as a bank of redundant functions that can help to maintain continuous ecosystem function following oscillations in taxonomic abundances is hypothesized as its main ecological role. Future studies focusing on rare microbes are crucial for advancing our knowledge of microbial ecology and evolution and unveiling their links with ecosystem function. Copyright © 2015 Institut Pasteur. Published by Elsevier Masson SAS. All rights reserved.

A microbent fiber optic pH sensor

NARCIS (Netherlands)

Thomas Lee, S.; Aneeshkumar, B.N.; Radhakrishnan, P.; Vallabhan, C.P.G.; Nampoori, V.P.N.

2002-01-01

Optical fiber sensors developed for measuring pH values usually employ an unclad and unstrained section of the fiber. In this paper, we describe the design and fabrication of a microbent fiber optic sensor that can be used for pH sensing. In order to obtain the desired performance, a permanently

Ocular leech infestation

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Lee YC

2015-02-01

Full Text Available Yueh-Chang Lee, Cheng-Jen Chiu Department of Ophthalmology, Buddhist Tzu-Chi General Hospital, Hualien, Taiwan, ROC Abstract: This case report describes a female toddler with manifestations of ocular leech infestation. A 2-year-old girl was brought to our outpatient clinic with a complaint of irritable crying after being taken to a stream in Hualien 1 day previous, where she played in the water. The parents noticed that she rubbed her right eye a lot. Upon examination, the girl had good fix and follow in either eye. Slit-lamp examination showed conjunctival injection with a moving dark black–brown foreign body partly attached in the lower conjunctiva. After applying topical anesthetics, the leech, measuring 1 cm in length, was extracted under a microscope. The patient began using topical antibiotic and corticosteroid agents. By 1 week after extraction, the patient had no obvious symptoms or signs, except for a limited subconjunctival hemorrhage, and no corneal/scleral involvement was observed. Keywords: leech, ocular foreign body, conjunctival reaction, pediatric ophthalmology

Microbes, Mineral Evolution, and the Rise of Microcontinents-Origin and Coevolution of Life with Early Earth.

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Grosch, Eugene G; Hazen, Robert M

2015-10-01

Earth is the most mineralogically diverse planet in our solar system, the direct consequence of a coevolving geosphere and biosphere. We consider the possibility that a microbial biosphere originated and thrived in the early Hadean-Archean Earth subseafloor environment, with fundamental consequences for the complex evolution and habitability of our planet. In this hypothesis paper, we explore possible venues for the origin of life and the direct consequences of microbially mediated, low-temperature hydrothermal alteration of the early oceanic lithosphere. We hypothesize that subsurface fluid-rock-microbe interactions resulted in more efficient hydration of the early oceanic crust, which in turn promoted bulk melting to produce the first evolved fragments of felsic crust. These evolved magmas most likely included sialic or tonalitic sheets, felsic volcaniclastics, and minor rhyolitic intrusions emplaced in an Iceland-type extensional setting as the earliest microcontinents. With the further development of proto-tectonic processes, these buoyant felsic crustal fragments formed the nucleus of intra-oceanic tonalite-trondhjemite-granitoid (TTG) island arcs. Thus microbes, by facilitating extensive hydrothermal alteration of the earliest oceanic crust through bioalteration, promoted mineral diversification and may have been early architects of surface environments and microcontinents on young Earth. We explore how the possible onset of subseafloor fluid-rock-microbe interactions on early Earth accelerated metavolcanic clay mineral formation, crustal melting, and subsequent metamorphic mineral evolution. We also consider environmental factors supporting this earliest step in geosphere-biosphere coevolution and the implications for habitability and mineral evolution on other rocky planets, such as Mars.

Quantitative Analysis of Microbes in Water Tank of G.A. Siwabessy Reactor

International Nuclear Information System (INIS)

Itjeu Karliana; Diah Dwiana Lestiani

2003-01-01

The quality of water in reactor system has an important role because it could effect the function as a coolant and the operation of reactor indirectly. The study of microbe analyzes has been carried out to detect the existence of microbes in water tank and quantitative analyzes of microbes also has been applied as a continuation of the previous study. The samples is taken out from the end side of reactor GA Siwabessy's tank, inoculated in TSA (Tripcase Soy Agar) medium, put in incubator at 30 - 35 o C for 4 days. The results of experiment show the reconfirmation for the existence of bacteria and the un-existence of yield. The quantitative analysis with TPC method show the growth rate of bacteria is twice in 24 hours. (author)

Bed Bug Infestations and Control Practices in China: Implications for Fighting the Global Bed Bug Resurgence

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Changlu Wang

2011-04-01

Full Text Available The bed bug resurgence in North America, Europe, and Australia has elicited interest in investigating the causes of the widespread and increasing infestations and in developing more effective control strategies. In order to extend global perspectives on bed bug management, we reviewed bed bug literature in China by searching five Chinese language electronic databases. We also conducted telephone interviews of 68 pest control firms in two cities during March 2011. In addition, we conducted telephone interviews to 68 pest control companies within two cities in March 2011. Two species of bed bugs (Cimex lectularius L. and Cimex hemipterus (F. are known to occur in China. These were common urban pests before the early1980s. Nationwide “Four-Pest Elimination” campaigns (bed bugs being one of the targeted pests were implemented in China from 1960 to the early 1980s. These campaigns succeeded in the elimination of bed bug infestations in most communities. Commonly used bed bug control methods included applications of hot water, sealing of bed bug harborages, physical removal, and applications of residual insecticides (mainly organophosphate sprays or dusts. Although international and domestic travel has increased rapidly in China over the past decade (2000–2010, there have only been sporadic new infestations reported in recent years. During 1999–2009, all documented bed bug infestations were found in group living facilities (military dormitories, worker dormitories, and prisons, hotels, or trains. One city (Shenzhen city near Hong Kong experienced significantly higher number of bed bug infestations. This city is characterized by a high concentration of migratory factory workers. Current bed bug control practices include educating residents, washing, reducing clutter, putting items under the hot sun in summer, and applying insecticides (pyrethroids or organophosphates. There have not been any studies or reports on bed bug insecticide

Dynamics of Haematobia irritans irritans (Diptera: Muscidae infestation on Nelore cattle in the Pantanal, Brazil

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Barros Antonio Thadeu M

2001-01-01

Full Text Available From June 1993 to May 1995, horn fly counts were conducted twice a month on untreated Nelore cattle raised extensively in the Pantanal. Horn fly population showed a bimodal fluctuation and peaks were observed every year after the beginning (November/December and at the end (May/June of the rainy season, which coincided with mid-late spring and mid-late fall, respectively. Horn flies were present on cattle throughout the year in at least 64% of the animals. Mean horn fly numbers on animals did not exceed 85 flies/cow during peaks and were under 35 flies/cow in most of the remaining periods. The highest infestations (population peaks were short and dropped suddenly within two weeks. Less than 15% of the animals in both herds could be considered as "fly-susceptible" - showing consistently higher infestations, or "fly-resistant" - showing consistently lower infestations.

A versatile palindromic amphipathic repeat coding sequence horizontally distributed among diverse bacterial and eucaryotic microbes

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Glass John I

2010-07-01

Full Text Available Abstract Background Intragenic tandem repeats occur throughout all domains of life and impart functional and structural variability to diverse translation products. Repeat proteins confer distinctive surface phenotypes to many unicellular organisms, including those with minimal genomes such as the wall-less bacterial monoderms, Mollicutes. One such repeat pattern in this clade is distributed in a manner suggesting its exchange by horizontal gene transfer (HGT. Expanding genome sequence databases reveal the pattern in a widening range of bacteria, and recently among eucaryotic microbes. We examined the genomic flux and consequences of the motif by determining its distribution, predicted structural features and association with membrane-targeted proteins. Results Using a refined hidden Markov model, we document a 25-residue protein sequence motif tandemly arrayed in variable-number repeats in ORFs lacking assigned functions. It appears sporadically in unicellular microbes from disparate bacterial and eucaryotic clades, representing diverse lifestyles and ecological niches that include host parasitic, marine and extreme environments. Tracts of the repeats predict a malleable configuration of recurring domains, with conserved hydrophobic residues forming an amphipathic secondary structure in which hydrophilic residues endow extensive sequence variation. Many ORFs with these domains also have membrane-targeting sequences that predict assorted topologies; others may comprise reservoirs of sequence variants. We demonstrate expressed variants among surface lipoproteins that distinguish closely related animal pathogens belonging to a subgroup of the Mollicutes. DNA sequences encoding the tandem domains display dyad symmetry. Moreover, in some taxa the domains occur in ORFs selectively associated with mobile elements. These features, a punctate phylogenetic distribution, and different patterns of dispersal in genomes of related taxa, suggest that the

Occurrence and biology of goat warble fly infestation by Przhevalskiana silenus (Diptera, Oestridae) in Iran.

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Oryan, A; Razavi, S M; Bahrami, S

2009-12-03

Goat warble fly infestation (GWFI) by the larvae of Przhevalskiana silenus is endemic in goats of semi-hilly and mountainous regions of Iran. This myiasis has severe economic impact on tanning industries, and it is responsible for impaired milk and meat production, growth retardation and carcass depreciation. To estimate the prevalence of GWFI in the southern areas of Iran, from October 2006 to December 2008, the carcasses of 8000 goats at a Shiraz slaughterhouse and 1000 each at Marvdasht and Darab cities were examined weekly for the presence of P. silenus larvae. In addition, appropriate sections from the skin and subcutaneous tissues were processed for histopathological investigation. The prevalence rate of infestation in different cities varied from 7.0% to 18.9% and the minimum and maximum infestation rate was 3 and 78, with an average rate of infestation of 26.2 warbles per animal. Significant differences were observed in the prevalence among different age groups with no significant difference between male and female animals. First instar larvae (L(1)) were found on infected animals from early August to end of September, second larval stage (L(2)) from early October to end of November and third-stage larvae (L(3)) from early December to mid-March. No larvae were found on skin or subcutaneous tissues from end of March to late July. Live L(1) initiated mild lymphocyte, macrophage and eosinophil infiltration while dead L(1) initiated granulomatous or pyogranulomatous reactions. Live L(2) induced severe inflammatory reaction and massive tissue necrosis, which continued for L(3) and until the end of infestation phase. The subcutaneous tissues, dermis and epidermis became necrotic and fragmented, and L(3) penetrated the necrotic area to start its aerobic life cycle.

Influence of storage on fungal infestation in spices

International Nuclear Information System (INIS)

Akhtar, T.; Sattar, A.; Khan, I.

1988-01-01

The present work was carried out to study the influence of storage and gamma radiation on fungal control in spices. The spices were irradiated with 5.0, 7.5 and 10.0 KGy and stored under ambient conditions for 12 months. Fungal infestation decreased to undetectable levels upon irradiation of these spices especially at higher doses and increased with advanced storage period both the irradiated and unirradiated samples. (orig. /A.B.)

Prediction of microbe-disease association from the integration of neighbor and graph with collaborative recommendation model.

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Huang, Yu-An; You, Zhu-Hong; Chen, Xing; Huang, Zhi-An; Zhang, Shanwen; Yan, Gui-Ying

2017-10-16

Accumulating clinical researches have shown that specific microbes with abnormal levels are closely associated with the development of various human diseases. Knowledge of microbe-disease associations can provide valuable insights for complex disease mechanism understanding as well as the prevention, diagnosis and treatment of various diseases. However, little effort has been made to predict microbial candidates for human complex diseases on a large scale. In this work, we developed a new computational model for predicting microbe-disease associations by combining two single recommendation methods. Based on the assumption that functionally similar microbes tend to get involved in the mechanism of similar disease, we adopted neighbor-based collaborative filtering and a graph-based scoring method to compute association possibility of microbe-disease pairs. The promising prediction performance could be attributed to the use of hybrid approach based on two single recommendation methods as well as the introduction of Gaussian kernel-based similarity and symptom-based disease similarity. To evaluate the performance of the proposed model, we implemented leave-one-out and fivefold cross validations on the HMDAD database, which is recently built as the first database collecting experimentally-confirmed microbe-disease associations. As a result, NGRHMDA achieved reliable results with AUCs of 0.9023 ± 0.0031 and 0.9111 in the validation frameworks of fivefold CV and LOOCV. In addition, 78.2% microbe samples and 66.7% disease samples are found to be consistent with the basic assumption of our work that microbes tend to get involved in the similar disease clusters, and vice versa. Compared with other methods, the prediction results yielded by NGRHMDA demonstrate its effective prediction performance for microbe-disease associations. It is anticipated that NGRHMDA can be used as a useful tool to search the most potential microbial candidates for various diseases, and therefore

Coping with the gypsy moth on new frontiers of infestation

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David A. Gansner; Owen W. Herrick; Garland N. Mason; Kurt W. Gottschalk

1987-01-01

Forest managers on new frontiers of infestation are searching for better ways to cope with the gypsy moth (Lymantria dispar). Presented herea are information and guidelines for remedial action to minimize future losses. Methods for assessing potential stand defoliation (susceptibility) and mortality (vulnerability), monitoring insect populations, and...

Occurrence of proscopiidae in Eucalyptus spp.: analysis of the infestations and spatial distribution

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Alexandre dos Santos

2014-12-01

Full Text Available The objective of this research was to report the occurrence of proscopiidae and to quantify its infestation and spatial distribution in one experimental plantation of eucalypt clones. The study was conducted in an experimental field with eucalypt hybrids of Eucalyptus urophylla x Eucalyptus grandis (clones GG100, Eucalyptus urophylla x Eucalyptus grandis (H13 and of Eucalyptus urophylla x Eucalyptus camaldulensis (VM01. The plantation was established in three continuous blocks with 512 plants with 3 m x 2 m, in Cáceres municipality, Mato Grosso State, Brazil. Infestation of proscopiidae insects was detected two months after planting . The insects were collected for identification. The attacked trees were geo-referenced and the injuries were quantified. The spatial pattern of proscopiidae he attack was determinated using the location information of the damaged plants, which have been submitted to a quadrats analyses using Morisita and binomial dispersion indexes. All the collected insects have been identified as Tetanorhynchus smithi Rehn, 1904 (Orthoptera, Proscopiidae. The infestation differed significantly among the three eucalypts clones and aggregated spatial pattern of attack was observed. This is the first report of this species of proscopiidae in eucalyptus in Mato Grosso State.

Weed communities of rain-fed lowland rice vary with infestation by Rhamphicarpa fistulosa

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Houngbédji, Tossimidé; Dessaint, Fabrice; Nicolardot, Bernard; Shykoff, Jacqui A.; Gibot-Leclerc, Stéphanie

2016-11-01

The facultative hemiparasitic plant Rhamphicarpa fistulosa (Orobanchaceae) thrives in seasonally wet soils in sub-Saharan Africa, mainly in marginal lowland rice growing environments where weeds are already a major constraint for rice production. Because lowland rice production is increasing in tropical Africa, it is important to ascertain the influence of R. fistulosa on weed plant communities in these rice-growing habitats. We investigated weed plant community richness and composition at four different levels of R. fistulosa infestation across two years of surveys from lowland rice fields in northern Togo (West Africa). Despite a lack of significant differences in community richness among sites with different R. fistulosa infestation levels, there were significant differences in community composition, both when estimated from presence-absence data and from relative abundance data, after controlling statistically for geographic proximity among sites. Rhamphicarpa fistulosa infestation, therefore, may influence the competitive balance between rice and its weeds and shape weed community structure. However, experimental studies are required to elucidate the weed host range of R. fistulosa and the direct and indirect effects of this hemiparasite in rice fields in order to predict its net impact on rice and its weed species.

Prophylactic treatment of flea-infested dogs with an imidacloprid / flumethrin collar (Seresto®, Bayer) to preempt infection with Dipylidium caninum.

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Fourie, Josephus J; Crafford, Dionne; Horak, Ivan G; Stanneck, Dorothee

2013-08-01

The objective of the study was to determine the sustained effectiveness of 10 % imidacloprid and 4.5 % flumethrin, incorporated in a slow-release matrix collar, in preventing Dipylidium caninum infection in dogs after repeated laboratory infestations with fleas infected with metacestodes of this tapeworm. Efficacy against infection with D. caninum was evaluated by infesting 16 dogs with cat fleas (Ctenocephalides felis) on study days 7, 14, 21, 28, 35 and 42, from batches suitably infected with D. caninum metacestodes. Prior to each post-treatment infestation the D. caninum infection rate for the fleas was determined by microscopically examining 100 fleas for D. caninum metacestodes. The D. caninum prevalence in the fleas used for infestations ranged from 23 % to 52 %. Medicated collars were fitted to 8 of the dogs on study day 0. The weight of the IVP collars varied between 35.48 g and 38.48 g (average 37.16 g), whilst animal weight varied between 12.20 kg and 17.98 kg (treated group, n = 8, average 14.79 kg). Seven days later infestation of each of the 16 dogs with 250 fleas commenced. Infestations continued at weekly intervals until Day 42 with efficacy against fleas evaluated 24 hours after each infestation. From Days 21 to 74, infection of the dogs with D. caninum was verified (daily examination of faeces and cages for the presence of expelled proglottids). Calculation of prophylactic effectiveness of the collars in preventing infection with D. caninum was based on the difference in geometric mean numbers of scoleces between groups at necropsy on Day 75. Effective prevention of infection with D. caninum was found to be 96.6 %. Efficacy of the collars against fleas was ≥ 99.9 % for the duration of the assessment period. Newly acquired infestations of fleas are rapidly eliminated by the insecticidal components of the medicated collars over a period of several months. In the event of fleas being infected with metacestodes, with D. caninum can be prevented in

Dipteran larvae and microbes facilitate nutrient sequestration in the Nepenthes gracilis pitcher plant host.

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Lam, Weng Ngai; Chong, Kwek Yan; Anand, Ganesh S; Tan, Hugh Tiang Wah

2017-03-01

The fluid-containing traps of Nepenthes carnivorous pitcher plants (Nepenthaceae) are often inhabited by organisms known as inquilines. Dipteran larvae are key components of such communities and are thought to facilitate pitcher nitrogen sequestration by converting prey protein into inorganic nitrogen, although this has never been demonstrated in Nepenthes Pitcher fluids are also inhabited by microbes, although the relationship(s) between these and the plant is still unclear. In this study, we examined the hypothesis of digestive mutualism between N. gracilis pitchers and both dipteran larvae and fluid microbes. Using dipteran larvae, prey and fluid volumes mimicking in situ pitcher conditions, we conducted in vitro experiments and measured changes in available fluid nitrogen in response to dipteran larvae and microbe presence. We showed that the presence of dipteran larvae resulted in significantly higher and faster releases of ammonium and soluble protein into fluids in artificial pitchers, and that the presence of fluid microbes did likewise for ammonium. We showed also that niche segregation occurs between phorid and culicid larvae, with the former fragmenting prey carcasses and the latter suppressing fluid microbe levels. These results clarify the relationships between several key pitcher-dwelling organisms, and show that pitcher communities facilitate nutrient sequestration in their host. © 2017 The Author(s).

Fatal Ichthyocotylurus erraticus infestation in Inca terns (Larosterna inca) in a zoological collection.

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Pieters, Wouter; Hoyer, Mark; Verstappen, Frank; Wolters, Marno; Ijzer, Jooske; de Jong, Sara; Cremers, Herman; Kik, Marja

2014-06-01

In a breeding group of Inca terns (Larosterna inca), 14 birds died without antemortem signs of illness. Other than a poor body condition and a bloody cloaca, no symptoms were observed. Gross necropsy revealed severe segmental hemorrhagic enteritis with intralesional trematodes in most birds. Histopathologic examination revealed infiltration of lymphocytes, plasma cells, and granulocytes in the lamina propria of the duodenum and cross-sections of trematodes in the lumen. The parasites were identified as Ichthyocotylurus erraticus, a trematode of fish-eating birds. The cause of the infestation most likely was the feeding of unfrozen fresh fish. We describe the first case of a lethal I. erraticus infestation in Inca terns.

Mapping giant reed (Arundo donax) infestations along the Texas-Mexico portion of the Rio Grande using aerial photography

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Giant reed is an invasive weed throughout the southern half of the United States with the densest stands growing along the coastal rivers of southern California and the Rio Grande in Texas. The objective of this study was to use aerial photography to map giant reed infestations and estimate infested...

Nitrate storage and dissimilatory nitrate reduction by eukaryotic microbes

DEFF Research Database (Denmark)

Kamp, Anja; Høgslund, Signe; Risgaard-Petersen, Nils

2015-01-01

The microbial nitrogen cycle is one of the most complex and environmentally important element cycles on Earth and has long been thought to be mediated exclusively by prokaryotic microbes. Rather recently, it was discovered that certain eukaryotic microbes are able to store nitrate intracellularly......, suggesting that eukaryotes may rival prokaryotes in terms of dissimilatory nitrate reduction. Finally, this review article sketches some evolutionary perspectives of eukaryotic nitrate metabolism and identifies open questions that need to be addressed in future investigations....... and use it for dissimilatory nitrate reduction in the absence of oxygen. The paradigm shift that this entailed is ecologically significant because the eukaryotes in question comprise global players like diatoms, foraminifers, and fungi. This review article provides an unprecedented overview of nitrate...

Enriching Metal-Oxidizing Microbes from Marine Sediment on Cathodic Currents

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Rowe, A. R.; Nealson, K. H.

2013-12-01

The ability of organisms to transfer electrons to and from substrates outside the cell is reshaping the way we look at microbial respiration. While this process, termed extracellular electron transport (EET), has been described in a number of metal reducing organisms, current evidence suggests that this process is widespread in nature and across physiologies. Additionally, it has been speculated that these previously overlooked electrochemical interactions may play an important role in global biogeochemical cycles. Requirements for EET could play a role in why the ';uncultured majority' have so far been resistant to culturing. As such, we are currently developing culturing techniques to target microbes capable of utilizing insoluble electron acceptors utilizing electrochemical techniques. Microbe-electrode interactions are analogous to the reactions that occur between microbes and minerals and may provide an apt way to mimic the environmental conditions (i.e., insoluble electron donor/acceptor at specific redox potentials) required for culturing specialized or EET dependent metabolisms. It has been previously demonstrated that aquatic sediments are capable of utilizing anodes as electron acceptors, thereby generating a current. While, it is known that microbes utilize electrons from a cathode for the reduction of different metals and oxygen in microbial fuel cells, currently there are no reports of environmental enrichments of microbes using cathodes. Replicate microcosms from marine sediments (sampled from Catalina Harbor, California) were incubated with ITO plated glass electrodes. Negative current production at -400mV (vs. Ag/AgCl reference electrodes) potentials was sustained for four weeks. Secondary enrichments were then constructed using the cathode as the primary electron source and a variety of anaerobic terminal electron acceptors--Nitrate, Fe3+, and SO42-. Positive current was maintained in enrichment cultures (compared to abiotic control containing

Clonorchis sinensis infestation promotes three-dimensional aggregation and invasion of cholangiocarcinoma cells.

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Jihee Won

Full Text Available Numerous experimental and epidemiological studies have demonstrated a correlation between Clonorchis sinensis (C. sinensis infestation and cholangiocarcinoma (CCA. However, the role of C. sinensis in the increased invasiveness and proliferation involved in the malignancy of CCA has not been addressed yet. Here, we investigated the possibility that C. sinensis infestation promotes expression of focal and cell-cell adhesion proteins in CCA cells and secretion of matrix metalloproteinases (MMPs. Adhesion proteins help maintain cell aggregates, and MMPs promote the three-dimensional invasion of cells into the neighboring extracellular matrix (ECM. Using a novel microfluidic assay, we quantitatively addressed the role of excretory-secretory products (ESPs gradients from C. sinensis in promoting the invasion of cells into the neighboring ECM.

Scientists discover how deadly fungal microbes enter host cells

OpenAIRE

Whyte, Barry James

2010-01-01

A research team led by scientists at the Virginia Bioinformatics Institute at Virginia Tech has discovered a fundamental entry mechanism that allows dangerous fungal microbes to infect plants and cause disease.

Influence of Hemlock Woolly Adelgid Infestation Levels on Water Stress in Eastern Hemlocks within the Great Smoky Mountains National Park, U.S.A.

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Carla Coots

2015-01-01

Full Text Available Extensive mortality of eastern hemlock, Tsuga canadensis (L. Carrière, resulting from infestation by hemlock woolly adelgid, Adelges tsugae Annand (Hemiptera: Adelgidae, has occurred throughout the eastern United States. Although imidacloprid treatment can reduce tree mortality, its effectiveness can be influenced by several factors including tree water stress. The relationship between water stress and infestation rates is unknown, and an understanding of these could greatly increase the efficiency of management for this invasive insect. The primary objective of this study was to assess water stress at three levels of hemlock woolly adelgid infestations. Water stress was measured monthly for 13 months in eastern hemlocks classified as <25%, 25%–75%, and >75% infested. The highest level of water stress was found in those trees with hemlock woolly adelgid infestation levels greater than 75%. The lowest level of water stress was found in those trees with less than 25% hemlock woolly adelgid infestation levels. Knowledge of these effects can contribute to development of more effective chemical management strategies.

Needle terpenoid composition of Pinus halepensis (Mill.) Trees infested by the scale insect Marchalina hellenica (Genn.) in Greece

Science.gov (United States)

Athanassios Gallis; Carlos Arrabal; Aristotle C. Papageorgiou; Maria C. Garcia-Vallejo

2012-01-01

Needle terpenoid composition was determined by using GLC-MS in Pinus halepensis (Mill.) trees that were infested and not infested by the scale insect Marchalina hellenica. The study area was within the Forest National Park of the Cape Sounion, southern Attica region, Greece. A total of 43 compounds, 32 of which were identified...

Endogenous System Microbes as Treatment Process ...

Science.gov (United States)

Monitoring the efficacy of treatment strategies to remove pathogens in decentralized systems remains a challenge. Evaluating log reduction targets by measuring pathogen levels is hampered by their sporadic and low occurrence rates. Fecal indicator bacteria are used in centralized systems to indicate the presence of fecal pathogens, but are ineffective decentralized treatment process indicators as they generally occur at levels too low to assess log reduction targets. System challenge testing by spiking with high loads of fecal indicator organisms, like MS2 coliphage, has limitations, especially for large systems. Microbes that are endogenous to the decentralized system, occur in high abundances and mimic removal rates of bacterial, viral and/or parasitic protozoan pathogens during treatment could serve as alternative treatment process indicators to verify log reduction targets. To identify abundant microbes in wastewater, the bacterial and viral communities were examined using deep sequencing. Building infrastructure-associated bacteria, like Zoogloea, were observed as dominant members of the bacterial community in graywater. In blackwater, bacteriophage of the order Caudovirales constituted the majority of contiguous sequences from the viral community. This study identifies candidate treatment process indicators in decentralized systems that could be used to verify log removal during treatment. The association of the presence of treatment process indic

Living with a crab: effect of Austinotheres angelicus (Brachyura, Pinnotheridae infestation on the condition of Saccostrea palmula (Ostreoida, Ostreidae

Directory of Open Access Journals (Sweden)

Sebastián Mena

Full Text Available Some members of the Pinnotheridae family exhibit close symbiotic relationships with bivalves, which may cause severe damage to the mollusk. The condition index (CI is a tool that serves to evaluate the effect of biotic and abiotic factors on the morphology and physiology of mollusks, including those caused by symbiotic organisms. In the present study, we evaluated the effects of the infestation of the pinnotherid crab Austinotheres angelicus on the oyster Saccostrea palmula through monthly sampling (April to November 2012 in Punta Morales, Pacific coast of Costa Rica. A total of 245 oysters were analyzed, of which 38% were infested by the pinnotherid crab. Most of the oysters analyzed (92% varied in depth between 1.5 and 15.0 mm; 89% of the infested oysters were in this depth range. The prevalence was positively correlated with the depth of the oyster. Our results revealed that crab infestation could reduce the CI by 11 to 33%. The obtained findings suggest that the infestation by A. angelicus provokes alterations of the flesh production of the oyster, especially when the association is with a pair of crabs including an ovigerous female. The association of A. angelicus with S. palmula is best described as facultative parasitism for male crabs and obligatory parasitism for females.

Induction of Systemic Resistance against Insect Herbivores in Plants by Beneficial Soil Microbes

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Md. Harun-Or Rashid

2017-10-01

Full Text Available Soil microorganisms with growth-promoting activities in plants, including rhizobacteria and rhizofungi, can improve plant health in a variety of different ways. These beneficial microbes may confer broad-spectrum resistance to insect herbivores. Here, we provide evidence that beneficial microbes modulate plant defenses against insect herbivores. Beneficial soil microorganisms can regulate hormone signaling including the jasmonic acid, ethylene and salicylic acid pathways, thereby leading to gene expression, biosynthesis of secondary metabolites, plant defensive proteins and different enzymes and volatile compounds, that may induce defenses against leaf-chewing as well as phloem-feeding insects. In this review, we discuss how beneficial microbes trigger induced systemic resistance against insects by promoting plant growth and highlight changes in plant molecular mechanisms and biochemical profiles.

Prevalence of head lice infestation and pediculicidal effect of permethrine shampoo in primary school girls in a low-income area in southeast of Iran.

Science.gov (United States)

Soleimani-Ahmadi, Moussa; Jaberhashemi, Seyed Aghil; Zare, Mehdi; Sanei-Dehkordi, Alireza

2017-07-24

Head lice infestation is a common public health problem that is most prevalent in primary school children throughout the world, especially in developing countries including different parts of Iran. This study aimed to determine the prevalence and risk factors associated with head lice infestation and pediculicidal effect of 1% permethrin shampoo in primary schools girls of Bashagard County, one of the low socioeconomic areas in southeast of Iran. In this interventional study six villages with similar demographical situations were selected and randomly assigned into intervention and control areas. In each area 150 girl students aged 7-12 years were selected randomly and screened for head lice infestation by visual scalp examination. In intervention area, treatment efficacy of 1% permethrin shampoo was evaluated via re-examination for infestation after one, two, and three weeks. Pre-tested structured questionnaire was used to collect data on socio-demographic and associated factors of head lice infestation. The prevalence of head lice infestation was 67.3%. There was significant association between head lice infestation and school grade, family size, parents' literacy, bathing facilities, frequency of hair washing, and use of shared articles (p shampoo for head lice treatment was 29.2, 68.9, and 90.3% after the first, second, and third weeks, respectively. The head lice infestation is a health problem in primary school girls of Bashagard County. Improvement of socioeconomic status and providing appropriate educational programs about head lice risk factors and prevention can be effective for reduction of infestation in this area. This trial has been registered and approved by Hormozgan University of Medical Sciences ethical committee (Trial No.764). Trial registration date: March 17 2014.

Ectoparasitic copepod infestation on a wild population of Neotropical catfish Sciades herzbergii Bloch, 1794: Histological evidences of lesions on host.

Science.gov (United States)

Fogel, Deborah; Fuentes, José Luis; Soto, Luz Marina; Lafuente, Wilson; Moncayo-Estrada, Rodrigo; López, Carlos

2017-12-01

We analyzed the infestation of the attached copepod species Lepeophtheirus sp on a wild population of Sciades herzbergii . The infestation and occurrence of attached copepods were related to body size, maturity and sex of host and the presence of lesions on fish skin were described. In 61 fish specimens (37 males and 24 females), total of 218 ectoparasitic copepods, including 204 mature and 14 immature stages were found. Copepods were attached to different regions of fish body without any regular pattern. The prevalence of infestation was 80.3% and intensity between 1 and 15 copepods/fish. No significant differences were found between sex or maturity and the presence of attached Lepeophtheirus sp. However, a contingency table including both sex and maturity status, and the total number of attached copepod per combined category showed a significant association. A positive correlation was found between body length of fish and intensity of infestation. Similarly, when comparing the infested fish according to group size, we found more copepods on larger individual. Attached copepods were associated with the presence of lesions visible to the naked eye. Histological analyses showed changes in cell architecture when sections of copepod-free tissues and attached copepods were compared.

Effects of insecticide spray application on insect pest infestation and ...

African Journals Online (AJOL)

Field studies were conducted during the 2008 - 2009 cropping season to determine the minimal insecticide application which can reduce cowpea yield losses on the field due to insect pest infestations in the Transkei region of South Africa. Treatments consisted of five cowpea varieties and four regimes of insecticide spray ...

Effect of abiotic factors on the infestation of spotted bollworm in advance genotypes of cotton

International Nuclear Information System (INIS)

Khaliq, A.; Subhani, M.N.; Murtaza, M.A.

2007-01-01

Studies were conducted on ten advance varieties of cotton Viz., BH-121, NIAB KRISHMA, DNA-137, VH-142, BH-125, MNH-635, SLH-627, FNH-245, CRIS-467 and CRIS-82 to see the effect of different weather conditions on the incidence and development of spotted bollworm infestation at Nuclear Institute for Agriculture and Biology (NIAB), Faisalabad. Temperature and relative humidity were correlated positively and rainfall affected negatively to the infestation of spotted bollworm on squares and green bolls in advance genotype of cotton. (author)

Remote collection of microorganisms at two depths in a freshwater lake using an unmanned surface vehicle (USV

Directory of Open Access Journals (Sweden)

Craig Powers

2018-01-01

Full Text Available Microorganisms are ubiquitous in freshwater aquatic environments, but little is known about their abundance, diversity, and transport. We designed and deployed a remote-operated water-sampling system onboard an unmanned surface vehicle (USV, a remote-controlled boat to collect and characterize microbes in a freshwater lake in Virginia, USA. The USV collected water samples simultaneously at 5 and 50 cm below the surface of the water at three separate locations over three days in October, 2016. These samples were plated on a non-selective medium (TSA and on a medium selective for the genus Pseudomonas (KBC to estimate concentrations of culturable bacteria in the lake. Mean concentrations ranged from 134 to 407 CFU/mL for microbes cultured on TSA, and from 2 to 8 CFU/mL for microbes cultured on KBC. There was a significant difference in the concentration of microbes cultured on KBC across three sampling locations in the lake (P = 0.027, suggesting an uneven distribution of Pseudomonas across the locations sampled. There was also a significant difference in concentrations of microbes cultured on TSA across the three sampling days (P = 0.038, demonstrating daily fluctuations in concentrations of culturable bacteria. There was no significant difference in concentrations of microbes cultured on TSA (P = 0.707 and KBC (P = 0.641 across the two depths sampled, suggesting microorganisms were well-mixed between 5 and 50 cm below the surface of the water. About 1 percent (7/720 of the colonies recovered across all four sampling missions were ice nucleation active (ice+ at temperatures warmer than −10 °C. Our work extends traditional manned observations of aquatic environments to unmanned systems, and highlights the potential for USVs to understand the distribution and diversity of microbes within and above freshwater aquatic environments.

Transcriptomic profiling of microbe-microbe interactions reveals the specific response of the biocontrol strain P. fluorescens In5 to the phytopathogen Rhizoctonia solani

DEFF Research Database (Denmark)

Hennessy, Rosanna Catherine; Glaring, Mikkel Andreas; Olsson, Stefan

2017-01-01

reads per sample. RESULTS: No significant changes in global gene expression were recorded during dual-culture of P. fluorescens In5 with any of the two pathogens but rather each pathogen appeared to induce expression of a specific set of genes. A particularly strong transcriptional response to R. solani...... and in particular the fungus R. solani. This highlights the importance of studying microbe-microbe interactions to gain a better understanding of how different systems function in vitro and ultimately in natural systems where biocontrol agents can be used for the sustainable management of plant diseases....

Radiation induced pesticidal microbes

Energy Technology Data Exchange (ETDEWEB)

Kim, Ki Yup; Lee, Y. K.; Kim, J. S.; Kim, J. K.; Lee, S. J.; Lim, D. S

2001-01-01

To isolate pesticidal microbes against plant pathogenic fungi, 4 strains of bacteria(K1. K3, K4, YS1) were isolated from mushroom compost and hot spring. K4, K1, K3, YS1 strain showed wide antifungal spectrum and high antifungal activities against 12 kinds of fungi. Specific proteins and the specific transcribed genes were found from the YS1 and its radiation-induced mutants. And knock-out mutants of antifungal activity were derived by transposon mutagenesis. From these knock-out mutants, the antifungal activity related genes and its modification by gamma-ray radiation are going to be studied. These results suggested that radiation could be an useful tool for the induction of functional mutants.

Radiation induced pesticidal microbes

International Nuclear Information System (INIS)

Kim, Ki Yup; Lee, Y. K.; Kim, J. S.; Kim, J. K.; Lee, S. J.; Lim, D. S.

2001-01-01

To isolate pesticidal microbes against plant pathogenic fungi, 4 strains of bacteria(K1. K3, K4, YS1) were isolated from mushroom compost and hot spring. K4, K1, K3, YS1 strain showed wide antifungal spectrum and high antifungal activities against 12 kinds of fungi. Specific proteins and the specific transcribed genes were found from the YS1 and its radiation-induced mutants. And knock-out mutants of antifungal activity were derived by transposon mutagenesis. From these knock-out mutants, the antifungal activity related genes and its modification by gamma-ray radiation are going to be studied. These results suggested that radiation could be an useful tool for the induction of functional mutants

Infestation of grape Vitis vinifera by Ceratitis capitata (Wiedemann) (Diptera: Tephritidae) in sub-medium Sao Francisco valley, Brazil

Energy Technology Data Exchange (ETDEWEB)

Habibe, Tuffi C.; Viana, Rodrigo E.; Damasceno, Itala Cruz; Malavasi, Aldo [Biofabrica Moscamed Brasil, Juazeiro, BA (Brazil). Distrito Industrial do Sao Francisco; Nascimento, Antonio S., E-mail: antnasc@cnpmf.embrapa.b [EMBRAPA Mandioca e Fruticultura Tropical, Cruz das Almas, BA (Brazil); Paranhos, Beatriz A.J.; Haji, Francisca Nemaura P., E-mail: bjodao@cpatsa.embrapa.b [EMBRAPA Semi-Arido, Petrolina, PE (Brazil); Carvalho, Raimundo S. [Agencia de Defesa Agropecuaria da Bahia (ADAB), Salvador, BA (Brazil)

2006-07-01

The objective of this study was to assess the infestation level in grapes, Vitis vinifera, by the medfly,Ceratitis capitata in the Sao Francisco River Valley. The adult population was monitored with Jackson trap baited with trimedlure. Samples of grapes for larval infestation assessment were taken along three months, with a total of 116 kg. The average FTD (flies/trap/day) for medfly males was 0.26. The number of pupae obtained from the fruit samples was 471; 287 adults emerged (60.4%), all Ceratitis capitata. The infestation level was 4.0 pupa/kg of fresh fruit. We conclude that grape is a medfly host in SFV, occasionally causing high damage to production. (author)

Infestation of grape Vitis vinifera by Ceratitis capitata (Wiedemann) (Diptera: Tephritidae) in sub-medium Sao Francisco valley, Brazil

International Nuclear Information System (INIS)

Habibe, Tuffi C.; Viana, Rodrigo E.; Damasceno, Itala Cruz; Malavasi, Aldo; Paranhos, Beatriz A.J.; Haji, Francisca Nemaura P.; Carvalho, Raimundo S.

2006-01-01

The objective of this study was to assess the infestation level in grapes, Vitis vinifera, by the medfly,Ceratitis capitata in the Sao Francisco River Valley. The adult population was monitored with Jackson trap baited with trimedlure. Samples of grapes for larval infestation assessment were taken along three months, with a total of 116 kg. The average FTD (flies/trap/day) for medfly males was 0.26. The number of pupae obtained from the fruit samples was 471; 287 adults emerged (60.4%), all Ceratitis capitata. The infestation level was 4.0 pupa/kg of fresh fruit. We conclude that grape is a medfly host in SFV, occasionally causing high damage to production. (author)

Density, heating value, and composition of pellets made from lodgepole pine (Pinus concorta Douglas) infested with mountain pine beetle (Dendroctonus ponderosae Hopkins)

Energy Technology Data Exchange (ETDEWEB)

Zaini, P.; Kadla, J. [British Columbia Univ., Vancouver, BC (Canada). Dept. of Wood Science; Sokansanj, S. [British Columbia Univ., Vancouver, BC (Canada). Dept. of Chemical and Biological Engineering; Oak Ridge National Laboratory, Oak Ridge, TN (United States). Environmental Sciences Div., Bioenergy Resource and Engineering Systems; Bi, X.; Lim, C.J. [British Columbia Univ., Vancouver, BC (Canada). Dept. of Chemical and Biological Engineering; Mani, S. [Georgia Univ., Athens, GA (United States). Faculty of Engineering; Melin, S. [British Columbia Univ., Vancouver, BC (Canada). Dept. of Chemical and Biological Engineering; Delta Research Corp., Delta, BC (Canada)

2008-07-01

BC is currently experiencing the largest recorded mountain pine beetle (MPB) infestation in North America that has killed nearly 7 million hectares of pine. The dead trees gradually lose their suitability for dimension lumber and pulp chips due to excessive cracking and spoilage. The economic losses can be partly averted by recovering the killed wood and processing it into pellets for bioenergy and other applications. Currently, Canada exports roughly 750,000 tons of wood pellets to Europe as a fuel for heat and power. The most important physical properties of wood pellets are bulk and pellet density, heating value, moisture content, and durability. In light of the chemical and structural changes reported with MPB attack, it is important to develop engineering data on properties of MPB-affected pine for wood pellets. The objective of this study was to compare chemical composition, density, and heat value of pellets made from MPB-infested wood and to compare these properties with those measured for pellets made from uninfested wood. Chemical analysis showed minor decrease in lignin and sugar contents of pellets made from MPB wood. Pellets made from MPB-infested pine had a mean value for density larger than those made from uninfested pine but the difference was not statistically significant. Heating values of the pellets from MPB-infested wood were similar to those measured for pellets from uninfested wood. A preliminary observation of mold growth did not show any further staining or other decay fungi growth for the pellets made from MPB-infested wood. The pellets made from MPB-infested wood were found to be similar to pellets made from uninfested wood in density, heating value, and most chemical constituents. The overall conclusion was that MBP infested wood can be used to produce comparable pellets to non infested wood pellets. 37 refs., 6 tabs., 2 figs.

Burstiness in Viral Bursts: How Stochasticity Affects Spatial Patterns in Virus-Microbe Dynamics

Science.gov (United States)

Lin, Yu-Hui; Taylor, Bradford P.; Weitz, Joshua S.

Spatial patterns emerge in living systems at the scale of microbes to metazoans. These patterns can be driven, in part, by the stochasticity inherent to the birth and death of individuals. For microbe-virus systems, infection and lysis of hosts by viruses results in both mortality of hosts and production of viral progeny. Here, we study how variation in the number of viral progeny per lysis event affects the spatial clustering of both viruses and microbes. Each viral ''burst'' is initially localized at a near-cellular scale. The number of progeny in a single lysis event can vary in magnitude between tens and thousands. These perturbations are not accounted for in mean-field models. Here we developed individual-based models to investigate how stochasticity affects spatial patterns in virus-microbe systems. We measured the spatial clustering of individuals using pair correlation functions. We found that increasing the burst size of viruses while maintaining the same production rate led to enhanced clustering. In this poster we also report on preliminary analysis on the evolution of the burstiness of viral bursts given a spatially distributed host community.

Infestation of mammals by Ixodes ricinus ticks (Acari: Ixodidae) in south-central Sweden.

Science.gov (United States)

Tälleklint, L; Jaenson, T G

1997-12-01

Infestation by Ixodes ricinus ticks on rodents, hares and cervids was examined at Bogesund, 10 km north of Stockholm, in south-central Sweden during 1991-1994 and on varying hares (Lepus timidus) at Stora Karlsö and Gotska Sandön in the Baltic Sea during 1992-1993. At Bogesund, there were great differences between two consecutive years in the number of I. ricinus larvae infesting bank voles (Clethrionomys glareolus). The seasonal pattern of infestation by I. ricinus larvae and nymphs on bank voles was unimodal in 1991, with peaks in June-July and bimodal in 1992, with peaks in June and August. Male bank voles, compared to females and older voles, compared to young voles, harboured greater numbers of I. ricinus ticks. Apodemus mice, compared to bank voles, harboured greater numbers of I. ricinus ticks. Ixodes ricinus larvae engorged on Apodemus mice were heavier than larvae engorged on bank voles and resulted in larger nymphs. However, there was no difference in the proportions of viable nymphs resulting from larvae engorged on mice or voles. The ranges in the numbers of I. ricinus ticks infesting individual hosts were 1-451 for rodents, 16-2374 for hares and 428-2072 for roe deer (Capreolus capreolus). These ranges of tick numbers are estimated to represent potential blood losses from individual hosts of approximately 0.2-65% for rodents, 0.2-13% for hares and 0.3-9.0% for roe deer. Within the populations of all host species examined, the distributions of all stages of I. ricinus were clumped, with most host individuals harbouring few ticks and only a few individuals harbouring many ticks. The data suggest that, even though a small proportion of tick hosts may be severely affected, the direct effects of feeding by I. ricinus are unlikely to play an important role on mammal population dynamics.

Prophylactic treatment of flea-infested cats with an imidacloprid/flumethrin collar to forestall infection with Dipylidium caninum.

Science.gov (United States)

Fourie, Josephus J; Crafford, Dionne; Horak, Ivan G; Stanneck, Dorothee

2012-07-27

The objective of the study was to determine the sustained effectiveness of 10% imidacloprid (w/w) and 4.5% flumethrin (w/w) incorporated in a slow-release matrix collar in preventing Dipylidium caninum infection in cats following repeated laboratory-infestations with fleas infected with metacestodes. Efficacy against infection with D. caninum was evaluated by infesting 16 cats with the flea Ctenocephalides felis felis infected with metacestodes of the tapeworm. Medicated collars were fitted to 8 of the cats and infestation of each cat with 200 fleas from a suitably infected batch commenced 7 days later and continued at weekly intervals until Day 28. Efficacy against fleas was evaluated 24 h after each infestation. Infection of the cats with D. caninum was verified by daily examination of the cats' faeces and immediate surroundings for proglottids from Day 21 to Day 60. Calculation of the prophylactic effectiveness of the collars in preventing infection of the cats with D. caninum was based on the difference in the geometric mean number of scoleces recovered from the gastrointestinal tracts of collared compared to untreated cats at necropsy on Day 61. Efficacy of the collars against infestation of the cats with fleas was 99.9% on Day 7 and 100% at each subsequent weekly assessment. Infection of the fleas with metacestodes was ≥40% in 7 to 13 day old fleas, but progressively decreased thereafter. At necropsy all the control cats were infected with D. caninum and harboured between 19 and 346 scoleces with a geometric mean of 58.3. A single treated cat was infected and harboured 2 scoleces. Effective prevention of infection with D. caninum, based on a comparison of the geometric mean numbers of scoleces recovered from control and treated cats, was 99.7%. The insecticidal components of the medicated collars are capable of rapidly eliminating newly-acquired infestations of fleas that are infected with the metacestodes of D. caninum, thus preventing infection with the

Prophylactic treatment of flea-infested cats with an imidacloprid/flumethrin collar to forestall infection with Dipylidium caninum

Directory of Open Access Journals (Sweden)

Fourie Josephus J

2012-07-01

Full Text Available Abstract Background The objective of the study was to determine the sustained effectiveness of 10% imidacloprid (w/w and 4.5% flumethrin (w/w incorporated in a slow-release matrix collar in preventing Dipylidium caninum infection in cats following repeated laboratory-infestations with fleas infected with metacestodes. Methods Efficacy against infection with D. caninum was evaluated by infesting 16 cats with the flea Ctenocephalides felis felis infected with metacestodes of the tapeworm. Medicated collars were fitted to 8 of the cats and infestation of each cat with 200 fleas from a suitably infected batch commenced 7 days later and continued at weekly intervals until Day 28. Efficacy against fleas was evaluated 24 h after each infestation. Infection of the cats with D. caninum was verified by daily examination of the cats’ faeces and immediate surroundings for proglottids from Day 21 to Day 60. Calculation of the prophylactic effectiveness of the collars in preventing infection of the cats with D. caninum was based on the difference in the geometric mean number of scoleces recovered from the gastrointestinal tracts of collared compared to untreated cats at necropsy on Day 61. Results Efficacy of the collars against infestation of the cats with fleas was 99.9% on Day 7 and 100% at each subsequent weekly assessment. Infection of the fleas with metacestodes was ≥40% in 7 to 13 day old fleas, but progressively decreased thereafter. At necropsy all the control cats were infected with D. caninum and harboured between 19 and 346 scoleces with a geometric mean of 58.3. A single treated cat was infected and harboured 2 scoleces. Effective prevention of infection with D. caninum, based on a comparison of the geometric mean numbers of scoleces recovered from control and treated cats, was 99.7%. Conclusion The insecticidal components of the medicated collars are capable of rapidly eliminating newly-acquired infestations of fleas that are infected

Volume 10 No. 11 November 2010 4340 SOIL MICROBE ...

African Journals Online (AJOL)

user

2010-11-11

Nov 11, 2010 ... SOIL MICROBE MEDIATED ZINC UPTAKE IN SOY BEAN: A REVIEW. Jefwa JM. 1* .... Porg, lipid Plp, high-energetic~P, sugar. Psuc and .... encouragement to prepare this presentation. ... Enviroquest Ltd Ontario, Canada.

Formation of a symbiotic host-microbe interface: the role of SNARE-mediated regulation of exocytosis

NARCIS (Netherlands)

Huisman, Rik

2018-01-01

At the heart of endosymbiosis microbes are hosted inside living cells in specialized membrane compartments that from a host-microbe interface, where nutrients and signal are efficiently exchanged. Such symbiotic interfaces include arbuscules produced by arbuscular mycorrhiza (AM) and

How do natural, uncultivated microbes interact with organic matter? Insights from single cell genomics and metagenomics

DEFF Research Database (Denmark)

Lloyd, Karen; Bird, Jordan; Schreiber, Lars

Abstract Since most of the microbes in marine sediments remain uncultured, little is known about the mechanisms by which these natural communities degrade organic matter (OM). Likewise, little is known about the make-up of labile OM in marine sediments beyond general functional classes such as pr......Abstract Since most of the microbes in marine sediments remain uncultured, little is known about the mechanisms by which these natural communities degrade organic matter (OM). Likewise, little is known about the make-up of labile OM in marine sediments beyond general functional classes...... such as proteins, carbohydrates, and lipids, measured as monomers. However, microbes have complex interactions with specific polymers within these functional classes, which can be indicated by a microbe's enzymatic toolkit. We ...

A Hydroponic Co-cultivation System for Simultaneous and Systematic Analysis of Plant/Microbe Molecular Interactions and Signaling.

Science.gov (United States)

Nathoo, Naeem; Bernards, Mark A; MacDonald, Jacqueline; Yuan, Ze-Chun

2017-07-22

An experimental design mimicking natural plant-microbe interactions is very important to delineate the complex plant-microbe signaling processes. Arabidopsis thaliana-Agrobacterium tumefaciens provides an excellent model system to study bacterial pathogenesis and plant interactions. Previous studies of plant-Agrobacterium interactions have largely relied on plant cell suspension cultures, the artificial wounding of plants, or the artificial induction of microbial virulence factors or plant defenses by synthetic chemicals. However, these methods are distinct from the natural signaling in planta, where plants and microbes recognize and respond in spatial and temporal manners. This work presents a hydroponic cocultivation system where intact plants are supported by metal mesh screens and cocultivated with Agrobacterium. In this cocultivation system, no synthetic phytohormone or chemical that induces microbial virulence or plant defense is supplemented. The hydroponic cocultivation system closely resembles natural plant-microbe interactions and signaling homeostasis in planta. Plant roots can be separated from the medium containing Agrobacterium, and the signaling and responses of both the plant hosts and the interacting microbes can be investigated simultaneously and systematically. At any given timepoint/interval, plant tissues or bacteria can be harvested separately for various "omics" analyses, demonstrating the power and efficacy of this system. The hydroponic cocultivation system can be easily adapted to study: 1) the reciprocal signaling of diverse plant-microbe systems, 2) signaling between a plant host and multiple microbial species (i.e. microbial consortia or microbiomes), 3) how nutrients and chemicals are implicated in plant-microbe signaling, and 4) how microbes interact with plant hosts and contribute to plant tolerance to biotic or abiotic stresses.

Trace gas emissions from a chronosequence of bark beetle-infested lodgepole pine (Pinus contorta) forest stands

Science.gov (United States)

Norton, U.; Pendall, E.; Ewers, B. E.; Borkhuu, B.

2011-12-01

Severe outbreak of mountain pine beetle (MPB) and associated blue stain fungi have killed millions of hectares of coniferous forests in Western North America. This unprecedented disturbance has critically impacted ecosystem biogeochemistry and net carbon (C) and nitrogen (N) fluxes. However, the effects on greenhouse gas (GHG) emissions and drivers of biogeochemical processes that trigger GHG emissions following MPB infestations are not well understood. Such information can help assess regional-level changes in ecosystem C and N budgets and large-scale disturbance impacts on gas exchange between the atmosphere and terrestrial ecosystem. The overall objective of this research was to assess the immediate responses of GHG fluxes and soil C and N mineralization rates along a chronosequence of recently infested (1-yr, 3-yr and 4-yr ago) and uninfested (150-yr, 20-yr and 15-yr old) lodgepole pine stands in Medicine Bow National Forest in southeastern Wyoming. We hypothesize that MPB-induced tree mortality significantly changes stand-level hydrology, soil organic matter quality and chemistry of aboveground and belowground plant inputs. Consequently, these modifications influence nitrous oxide (N2O) emissions and methane (CH4) assimilation. Biweekly GHG measurements using static chambers were carried out during three consecutive snow-free growing seasons. Our results suggest that a stand infested within a year already shows a 20% increase in spring N2O production and a small decline in summer CH4 assimilation when compared to uninfested stands. Stands infested three and four years prior to our measurements produce over three times more N2O and assimilate three to five times less CH4 when compared to uninfested stands. In addition, a notable increase in soil moisture content and soil mineral N concentrations following early onset of the MPB infestation was also observed. An overall increase in N2O production and decline in CH4 assimilation following MPB infestation may

Tenancy, Marriage, and the Boll Weevil Infestation, 1892-1930.

Science.gov (United States)

Bloome, Deirdre; Feigenbaum, James; Muller, Christopher

2017-06-01

In the early twentieth century, the cotton-growing regions of the U.S. South were dominated by families of tenant farmers. Tenant farming created opportunities and incentives for prospective tenants to marry at young ages. These opportunities and incentives especially affected African Americans, who had few alternatives to working as tenants. Using complete-count Census of Population data from 1900-1930 and Census of Agriculture data from 1889-1929, we find that increases in tenancy over time increased the prevalence of marriage among young African Americans. We then study how marriage was affected by one of the most notorious disruptions to southern agriculture at the turn of the century: the boll weevil infestation of 1892-1922. Using historical Department of Agriculture maps, we show that the boll weevil's arrival reduced the share of farms worked by tenants as well as the share of African Americans who married at young ages. When the boll weevil infestation altered African Americans' opportunities and incentives to marry, the share of African Americans who married young fell accordingly. Our results provide new evidence about the effect of economic and political institutions on demographic transformations.

Les infestations par les poux de tête : une mise à jour clinique.

Science.gov (United States)

Cummings, Carl; Finlay, Jane C; MacDonald, Noni E

2018-02-01

Les infestations par les poux de tête ( Pediculus humanus capitis ) ne constituent ni un risque sanitaire primaire ni un vecteur de maladie, mais représentent plutôt un problème de société au coût impor- tant. Pour diagnostiquer une infestation, il faut déceler un pou vivant. Même si les pyréthines et la perméthrine demeurent les traitements de première intention au Canada, la solution de myristate d'isopropyle et de ST-cyclométhicone et la diméticone peuvent être envisagées en deuxième intention après un échec thérapeutique démontré.

Microbes on a bottle: substrate, season and geography influence community composition of microbes colonizing marine plastic debris

OpenAIRE

Carter, Dee A.; Oberbeckmann, Sonja; Osborn, A. Mark; Duhaime, Melissa B.

2016-01-01

Plastic debris pervades in our oceans and freshwater systems and the potential ecosystem-level impacts of this anthropogenic litter require urgent evaluation. Microbes readily colonize aquatic plastic debris and members of these biofilm communities are speculated to include pathogenic, toxic, invasive or plastic degrading-species. The influence of plastic-colonizing microorganisms on the fate of plastic debris is largely unknown, as is the role of plastic in selecting for unique microbial com...

Utilization of oil palm empty bunches waste as biochar-microbes for improving availibity of soil nutrients

Directory of Open Access Journals (Sweden)

G . I . Ichriani

2016-01-01

Full Text Available There are about 23% waste oil palm empty fruit bunches (OPEFB of total waste generated from the production of crude palm oil in oil palm plantations. Pyrolysis technology can be used to convert waste into biochar and further can be utilized for the improvement of soil. Biochar-microbes of OPEFB are biochar from OPEFB biomass that enriched with soil microbes. Biochar-microbes is expected to be used for the improvement of the soil and plants. Therefore the purpose of this research was to study the ability of biochar-microbes OPEFB to increase availability of the nutrients in sandy soils. The process of making biochar done by using slow pyrolysis technology by heating 300oC and 400oC for 2 and 3 hours, and with sizes 40 and 80 mesh, as well as indigenous microbial Bulkhorderia nodosa G.52.Rif1 and Trichoderma sp. added. The biochar production and research were conducted in the Department of Forestry Laboratory and in the Department of Agronomy Laboratory, Faculty of Agriculture, Palangka Raya University. In general, the study showed that biochar-microbes could maintain the soil pH value and tends to increase the soil pH, increasing the holding capacity of sandy soil to the elements of P and K as well as increasing the availability of nutrients N, P and K. Furthermore, this study showed that the biochar process by 400oC heating for 3 hours and 40 mesh with microbes or without microbes were the best effect on the improvement of the quality of holding capacity and the nutrients supply in sandy soils.

Mining with microbes

International Nuclear Information System (INIS)

Rawlings., D.E.; Silver, S.

1995-01-01

Microbes are playing increasingly important roles in commercial mining operations, where they are being used in the open-quotes bioleachingclose quotes of copper, uranium, and gold ores. Direct leaching is when microbial metabolism changes the redox state of the metal being harvested, rendering it more soluble. Indirect leaching includes redox chemistry of other metal cations that are then coupled in chemical oxidation or reduction of the harvested metal ion and microbial attack upon and solubilization of the mineral matrix in which the metal is physically embedded. In addition, bacterial cells are used to detoxify the waste cyanide solution from gold-mining operations and as open-quotes absorbantsclose quotes of the mineral cations. Bacterial cells may replace activated carbon or alternative biomass. With an increasing understanding of microbial physiology, biochemistry and molecular genetics, rational approaches to improving these microbial activities become possible. 40 refs., 3 figs

Prevalence and risk factors of ticks infesting cattle reared on the ...

African Journals Online (AJOL)

risk factors among cattle reared on dairy, beef and free-range grazing farms of Haramaya University .... guidelines using gross and stereomicroscopic examination. .... with the risk and differences in the farm management systems, prevalence of ... tick genera combinations infested animals with diversified tick genera in Ha-.

Sprectroradiometric characteristics of inland water bodies infestated by Oscillatoria rubescens algae

Science.gov (United States)

Ciraolo, Giuseppe; La Loggia, Goffredo; Maltese, Antonino

2010-10-01

In December 2006 blooms of Oscillatoria rubescens were found in the reservoir Prizzi in Sicily. Oscillatoria is a genus of filamentous alga comprising approximately 6 species, between these the O. rubescens is sadly famous since this organism produces microcystins which are powerful hepatotoxins. Firstly found in Europe in 1825 on Geneva lake, recently (2006) those algae has been find out in Pozzillo, Nicoletti e Ancipa reservoirs (Enna Province), as well as in Prizzi (Palermo Province) and Garcia reservoirs (Trapani Province). Toxins produced by those bacteria (usually called microcystine LR-1 and LR-2) are highly toxic since they can activate oncogenes cells causing cancer pathologies on liver and gastrointestinal tract. Even if water treatment plants should ensure the provision of safe drinking water from surface waters contaminated with those toxic algae blooms, the contamination of reservoirs used for civil and agricultural supply highlights human health risks. International literature suggests a threshold value of 0.01 μgl-1 to avoid liver cancer using water coming from contaminated water bodies for a long period. Since O. rubescens activities is strongly related to phosphate and nitrogen compounds as well as to temperature and light transmission within water, the paper presents the comparison between optical properties of the water of an infested reservoir and those of a reservoir characterized by clear water. Field campaigns were carried out in February-March 2008 in order to quantify the spectral transparencies of two water bodies through the calculation of the diffuse attenuation coefficient, measuring underwater downwelling irradiance at different depths as well as water spectral reflectance. Results show that diffuse attenuation coefficient is reduced by approximately 15% reducing light penetration in the water column; coherently reflectance spectral signature generally decreases, exhibiting a characteristic peak around 703 nm not present in

Expression profiling of selected glutathione transferase genes in Zea mays (L.) seedlings infested with cereal aphids.

Science.gov (United States)

Sytykiewicz, Hubert; Chrzanowski, Grzegorz; Czerniewicz, Paweł; Sprawka, Iwona; Łukasik, Iwona; Goławska, Sylwia; Sempruch, Cezary

2014-01-01

The purpose of this report was to evaluate the expression patterns of selected glutathione transferase genes (gst1, gst18, gst23 and gst24) in the tissues of two maize (Zea mays L.) varieties (relatively resistant Ambrozja and susceptible Tasty Sweet) that were colonized with oligophagous bird cherry-oat aphid (Rhopalosiphum padi L.) or monophagous grain aphid (Sitobion avenae L.). Simultaneously, insect-triggered generation of superoxide anion radicals (O2•-) in infested Z. mays plants was monitored. Quantified parameters were measured at 1, 2, 4, 8, 24, 48 and 72 h post-initial aphid infestation (hpi) in relation to the non-infested control seedlings. Significant increases in gst transcript amounts were recorded in aphid-stressed plants in comparison to the control seedlings. Maximal enhancement in the expression of the gst genes in aphid-attacked maize plants was found at 8 hpi (gst23) or 24 hpi (gst1, gst18 and gst24) compared to the control. Investigated Z. mays cultivars formed excessive superoxide anion radicals in response to insect treatments, and the highest overproduction of O2•- was noted 4 or 8 h after infestation, depending on the aphid treatment and maize genotype. Importantly, the Ambrozja variety could be characterized as having more profound increments in the levels of gst transcript abundance and O2•- generation in comparison with the Tasty Sweet genotype.

Transcriptional signatures of parasitization and markers of colony decline in Varroa-infested honey bees (Apis mellifera).

Science.gov (United States)

Zanni, Virginia; Galbraith, David A; Annoscia, Desiderato; Grozinger, Christina M; Nazzi, Francesco

2017-08-01

Extensive annual losses of honey bee colonies (Apis mellifera L.) reported in the northern hemisphere represent a global problem for agriculture and biodiversity. The parasitic mite Varroa destructor, in association with deformed wing virus (DWV), plays a key role in this phenomenon, but the underlying mechanisms are still unclear. To elucidate these mechanisms, we analyzed the gene expression profile of uninfested and mite infested bees, under laboratory and field conditions, highlighting the effects of parasitization on the bee's transcriptome under a variety of conditions and scenarios. Parasitization was significantly correlated with higher viral loads. Honey bees exposed to mite infestation exhibited an altered expression of genes related to stress response, immunity, nervous system function, metabolism and behavioural maturation. Additionally, mite infested young bees showed a gene expression profile resembling that of forager bees. To identify potential molecular markers of colony decline, the expression of genes that were commonly regulated across the experiments were subsequently assessed in colonies experiencing increasing mite infestation levels. These studies suggest that PGRP-2, hymenoptaecin, a glucan recognition protein, UNC93 and a p450 cytocrome maybe suitable general biomarkers of Varroa-induced colony decline. Furthermore, the reliability of vitellogenin, a yolk protein previously identified as a good marker of colony survival, was confirmed here. Copyright © 2017 Elsevier Ltd. All rights reserved.

Analysis of the Heterogeneity of Weed Infestation in Cereal Stands

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Jan Winkler

2015-01-01

Full Text Available The aim of this study was to evaluate the heterogeneity of the incidence of individual weed species on a selected experimental field. This field was situated in the cadastre of the village Žabčice (South Moravian Region, Czech Republic. To evaluate the intensity of weed infestation, a field experiment was established. In 2011, altogether 33 weed species were identified in a stand of spring barley. In the next year, the total number of weeds in a stand of winter wheat was 22. Basing on results of the evaluation of infestation heterogeneity it was possible to detect the following trends: The first one concerned the incidence of significantly dominant species Chenopodium album and Veronica hederifolia in stands of spring barley and winter wheat, respectively. The second one expressed the incidence of the so-called sub-dominant species. Regarding the character of the incidence of these weed species it would be suitable to kill them by means of a targeted application of herbicides. Finally, the third trend concerned the incidence of that group of weeds that occurred in the major part of the experimental plot but in low numbers only. The abundance of these species was minimal and the total number of weed plants did not exceed the limit of 100 specimens. This group of weeds involved also those species that were markedly more frequent on plots situated closer to the margin of the experimental field. The targeted application of herbicides can be performed on plots with a lower level of weed infestation; another possibility, however, seems to be a targeted intervention that helps to control the incidence of a certain weed species and/or that is performed along the margin of the field where the different weed species are more frequent.

Two-way plant mediated interactions between root-associated microbes and insects: from ecology to mechanisms

NARCIS (Netherlands)

Pangesti, N.P.D.; Pineda Gomez, A.M.; Pieterse, C.M.J.; Dicke, M.; Loon, van J.J.A.

2013-01-01

Plants are members of complex communities and function as a link between above- and below-ground organisms. Associations between plants and soil-borne microbes commonly occur and have often been found beneficial for plant fitness. Root-associated microbes may trigger physiological changes in the

How Do Small Things Make a Big Difference? Activities to Teach about Human-Microbe Interactions.

Science.gov (United States)

Jasti, Chandana; Hug, Barbara; Waters, Jillian L; Whitaker, Rachel J

2014-11-01

Recent scientific studies are providing increasing evidence for how microbes living in and on us are essential to our good health. However, many students still think of microbes only as germs that harm us. The classroom activities presented here are designed to shift student thinking on this topic. In these guided inquiry activities, students investigate human-microbe interactions as they work together to interpret and analyze authentic data from published articles and develop scientific models. Through the activities, students learn and apply ecological concepts as they come to see the human body as a fascinatingly complex ecosystem.

How Do Small Things Make a Big Difference? Activities to Teach about Human–Microbe Interactions

Science.gov (United States)

JASTI, CHANDANA; HUG, BARBARA; WATERS, JILLIAN L.; WHITAKER, RACHEL J.

2014-01-01

Recent scientific studies are providing increasing evidence for how microbes living in and on us are essential to our good health. However, many students still think of microbes only as germs that harm us. The classroom activities presented here are designed to shift student thinking on this topic. In these guided inquiry activities, students investigate human–microbe interactions as they work together to interpret and analyze authentic data from published articles and develop scientific models. Through the activities, students learn and apply ecological concepts as they come to see the human body as a fascinatingly complex ecosystem. PMID:25520526

The impact of stubble crop on spring barley weed infestation

Directory of Open Access Journals (Sweden)

Eleonora Wrzesińska

2016-09-01

Full Text Available The condition and degree of weed infestation were determined in a spring barely crop grown in a short-term monoculture after mulching the soil with plants grown as a stubble crop (the control treatment without cover crop – lacy phacelia, white mustard, sunflower. The field experiment was carried out in 2010–2013 on good rye soil complex using a split-block design in four replications. The obtained results (the mean from all years of the experiment showed that the stubble crop, especially sunflower, reduced the diversity of weed species without causing at the same time changes in weed species dominance. In all the control treatments of the experiment, Chenopodium album and Fallopia convolvulus were the dominant species. The degree of spring barley weed infestation depended on the species grown in the cover crop. White mustard and lacy phacelia slightly increased the number of weeds but their fresh matter significantly increased. However, the sunflower cover crop significantly increased the number of weeds without any substantial differentiation of their fresh mass.

Incidence of Infestation and Larval Success of Emerald Ash Borer (Agrilus planipennis) on White Fringetree (Chionanthus virginicus), Chinese Fringetree (Chionanthus retusus), and Devilwood (Osmanthus americanus).

Science.gov (United States)

Cipollini, Don; Rigsby, Chad M

2015-10-01

We compared the incidence of infestation by emerald ash borer (EAB) and lilac borer on white fringetree to that of its Asian congener, Chinese fringetree, Chionanthus retusus, and a North American relative, devilwood, Osmanthus americanus. We also conducted laboratory bioassays to determine the suitability of these hosts for EAB larvae. At Spring Grove Cemetery and Arboretum in Cincinnati, Ohio, 9 of 28 white fringetrees examined were infested by EAB. Most of the white fringetrees had lilac borer infestation, and most of the trees infested by EAB also had lilac borer infestation. None of the 11 Chinese fringetrees examined were infested by either EAB or lilac borer. Each of the five devilwood individuals examined was infested by lilac borer, but not EAB. At The Morton Arboretum in Lisle, Illinois, 7 of 16 white fringetrees examined were infested by EAB, while none of the seven Chinese fringetrees examined were infested by either insect. A 40-d bioassay confirmed that white fringetree was an acceptable host, producing fourth-instar larvae that were smaller than those produced on a highly susceptible cultivar of green ash, Fraxinus pennsylvanica. No larvae survived on Chinese fringetree, and neonates were largely incapable of feeding on it. Two larvae survived on devilwood, reaching the second instar and excavating extensive galleries. Future work should be aimed at biotic and abiotic factors influencing the susceptibility of white fringetree, as well as further examination of close relatives for their vulnerability to EAB. © The Authors 2015. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Interactions between exotic invasive plants and soil microbes in the rhizosphere suggest that 'everything is not everywhere'.

Science.gov (United States)

Rout, Marnie E; Callaway, Ragan M

2012-07-01

The study of soil biota in the context of exotic plant invasions has led to an explosion in our understanding of the ecological roles of many different groups of microbes that function in roots or at the root-soil interface. Part of this progress has been the emergence of two biogeographic patterns involving invasive plants and soil microbes. First, in their non-native ranges invasive plants commonly interact differently with the same soil microbes than native plants. Second, in their native ranges, plants that are invasive elsewhere commonly interact functionally with soil microbes differently in their home ranges than they do in their non-native ranges. These studies pose a challenge to a long-held paradigm about microbial biogeography - the idea that microbes are not limited by dispersal and are thus free from the basic taxonomic, biogeographical and evolutionary framework that characterizes all other life on Earth. As an analogy, the global distribution of animals that function as carnivores does not negate the fascinating evolutionary biogeographic patterns of carnivores. Other challenges to this notion come from new measurements of genetic differences among microbes across geographic boundaries, which also suggest that meaningful biogeographic patterns exist for microorganisms. We expand this discussion of whether or not 'everything is everywhere' by using the inherently biogeographic context of plant invasions by reviewing the literature on interactions among invasive plants and the microorganisms in the rhizosphere. We find that these interactions can be delineated at multiple scales: from individual plants to continents. Thus the microbes that regulate major aspects of plant biology do not appear to be exempt from the fundamental evolutionary processes of geographical isolation and natural selection. At the important scales of taxonomy, ecotype and ecosystem functions, the fundamental ecology of invaders and soil microbes indicates that everything might

Th17 Cell Induction by Adhesion of Microbes to Intestinal Epithelial Cells.

Science.gov (United States)

Atarashi, Koji; Tanoue, Takeshi; Ando, Minoru; Kamada, Nobuhiko; Nagano, Yuji; Narushima, Seiko; Suda, Wataru; Imaoka, Akemi; Setoyama, Hiromi; Nagamori, Takashi; Ishikawa, Eiji; Shima, Tatsuichiro; Hara, Taeko; Kado, Shoichi; Jinnohara, Toshi; Ohno, Hiroshi; Kondo, Takashi; Toyooka, Kiminori; Watanabe, Eiichiro; Yokoyama, Shin-Ichiro; Tokoro, Shunji; Mori, Hiroshi; Noguchi, Yurika; Morita, Hidetoshi; Ivanov, Ivaylo I; Sugiyama, Tsuyoshi; Nuñez, Gabriel; Camp, J Gray; Hattori, Masahira; Umesaki, Yoshinori; Honda, Kenya

2015-10-08

Intestinal Th17 cells are induced and accumulate in response to colonization with a subgroup of intestinal microbes such as segmented filamentous bacteria (SFB) and certain extracellular pathogens. Here, we show that adhesion of microbes to intestinal epithelial cells (ECs) is a critical cue for Th17 induction. Upon monocolonization of germ-free mice or rats with SFB indigenous to mice (M-SFB) or rats (R-SFB), M-SFB and R-SFB showed host-specific adhesion to small intestinal ECs, accompanied by host-specific induction of Th17 cells. Citrobacter rodentium and Escherichia coli O157 triggered similar Th17 responses, whereas adhesion-defective mutants of these microbes failed to do so. Moreover, a mixture of 20 bacterial strains, which were selected and isolated from fecal samples of a patient with ulcerative colitis on the basis of their ability to cause a robust induction of Th17 cells in the mouse colon, also exhibited EC-adhesive characteristics. Copyright © 2015 Elsevier Inc. All rights reserved.

Unilateral phthiriasis palpebrarum infestation in a child during occlusion therapy for amblyopia: Case report.

Science.gov (United States)

Biler, Elif Demirkilinc; Selver, Ozlem Barut; Palamar, Melis; Uner, Ahmet; Uretmen, Onder

2016-01-01

An 8-year-old mentally retarded boy is brought to the hospital because of itching and burning at his right eye for 10 days. He was on full time right eye occlusion therapy for left amblyopia. Slit lamp examination revealed nits and adult lice anchored to the eyelashes in his occluded eye. Eyelashes and all detected lice and nits were mechanically trimmed, and sent for parasitological examination, which confirmed the diagnosis. Upon familial evaluation for additional infestation, the father was also found to have genital phthiriasis pubis and received appropriate treatment. While phthiriasis palpebrarum in children may signify sexual abuse, a detailed investigation by a child psychiatrist was performed and revealed no sign of abuse. Since the infestation was at only on occluded eye, the most possible explanation for the transmission was evaluated as the misusage of the adhesive patch in our case. In conclusion, sexual abuse should be excluded in children with phthiriasis palpebrarum and parents of amblyopic children on occlusion therapy should be warned about the importance of the hygiene of the patching in order to avoid any kind of infection and infestation.

Does hair coat length affect flea infestation in naturally infested dogs?

Science.gov (United States)

Silva, Guilherme Araujo Collares da; Lins, Luciana Araujo; Irala, Márcio Josué Costa; Cárcamo, Marcial Corrêa; Ribeiro, Paulo Bretanha

2016-01-01

The Siphonaptera are parasitic insects of endothermic animals and Ctenocephalides felis and Pulex irritans are important parasites of dogs. This study evaluated the effect of hair coat length and time of year on the population size of C. felis and P. irritans in naturally infested dogs. Fleas were collected from 14 dogs on a monthly basis for a year (February 2015 to January 2016) at a rural property in Bagé, Rio Grande do Sul, Brazil. The dogs were divided into two groups based on hair coat length: short coat (coat length coat (coat length > 5.0 cm, n= 7). In total, 2057 fleas were collected, 1541 of which were C. felis (74.91%) and 516 were P. irritans (25.08%). The number of C. felis and P. irritans individuals was significantly affected by hair coat length and time of year. The variation in flea numbers over the study months was higher in long-coated than in short-coated dogs for the two flea species and flea numbers increased with increasing mean monthly temperatures. The results provide a better understanding of behavioral aspects of flea communities in dogs and may help develop control strategies targeting these parasites.

Ectoparasitic copepod infestation on a wild population of Neotropical catfish Sciades herzbergii Bloch, 1794: Histological evidences of lesions on host

Directory of Open Access Journals (Sweden)

Deborah Fogel

2017-12-01

Full Text Available We analyzed the infestation of the attached copepod species Lepeophtheirus sp on a wild population of Sciades herzbergii. The infestation and occurrence of attached copepods were related to body size, maturity and sex of host and the presence of lesions on fish skin were described. In 61 fish specimens (37 males and 24 females, total of 218 ectoparasitic copepods, including 204 mature and 14 immature stages were found. Copepods were attached to different regions of fish body without any regular pattern. The prevalence of infestation was 80.3% and intensity between 1 and 15 copepods/fish. No significant differences were found between sex or maturity and the presence of attached Lepeophtheirus sp. However, a contingency table including both sex and maturity status, and the total number of attached copepod per combined category showed a significant association. A positive correlation was found between body length of fish and intensity of infestation. Similarly, when comparing the infested fish according to group size, we found more copepods on larger individual. Attached copepods were associated with the presence of lesions visible to the naked eye. Histological analyses showed changes in cell architecture when sections of copepod-free tissues and attached copepods were compared. Keywords: Damages, Fish, Lepeophtheirus, lesions, Sea lice, Parasitism

Association between khat chewing and intestinal parasitic infestations: a community based, cross-sectional study done in Jimma Town, Southwest Ethiopia.

Science.gov (United States)

Mossie, Andualem; Kebedez, Seleshi; Gobena, Teshome

2013-07-01

Khat (Catha edulis Forsk), is the psychostimulant herb cultivated in East Africa. Khat chewing could have health damaging effect. The aim of the present study was to determine the association between khat chewing and intestinal parasitic infestation. A cross sectional study was conducted in Jimma Town in July 2010. Structured questionnaire was administered to 991 individuals selected by a systematic sampling method. Stool samples were collected for the diagnosis of intestinal parasitic infestation. Data analysis was done using SPSS Version 16.0 for Windows. Among 991 respondents, 638 (64.4%) were females, 502 (50.7%) were Oromos, 486 (49%) were Orthodox and 475 (47.9%) of them were in the age group of 18-24 years old. The current prevalence of khat chewing was found to be 52.7%. The prevalence of single to multiple parasitic infestations was 33.4%. Negative association (p = 0.000) was recorded between the habit of khat chewing and intestinal parasitosis. Non-chewers were more affected than chewers. Higher proportion of non chewers was infested with parasites than chewers, suggesting that khat chewing might have a protective role against parasitic infestation. Further investigation on the effect of khat extract in in vitro and in vivo is recommended to disclose detail mechanisms.

Infestation of a bird and two cats by larvae of Plodia interpunctella (Lepidoptera: Pyralidae).

Science.gov (United States)

Pinckney, R D; Kanton, K; Foster, C N; Steinberg, H; Pellitteri, P

2001-09-01

The larvae of Plodia interpunctella (Hübner), commonly known as the Indian meal moth, often cause enormous losses in stored food supplies. We present three clinical case reports of accidental infestation by P. interpunctella larvae in two domestic cats and one parakeet. A larva gained entry into the avian host and subsequently migrated to the brain. It was alive, covered with "silk-like" fibers and confirmed to be a fourth instar. Plodia interpunctella larvae were excised with forceps from the subcutaneous tissues of the ear and neck of two cats in a different household. Previous reports of infestation by P. interpunctella larvae in vertebrates are unknown.

Dose rate effects on survival of two insect species which commonly infest stored corn

International Nuclear Information System (INIS)

Adem, E.; Uribe, R.M.; Watters, F.L.

1979-01-01

A study of the dose rate effects on survival of two species of insects which commonly infest commercial maize in Mexico was undertaken using 60 Co γ radiation and 1.0 MeV electrons, to determine whether an optimum dose rate exists for the irradiation of grain infested with these insects. Experiments have shown that the effectiveness of γ and electron irradiation were not influenced by dose rates from 10 to 120 Gy/min for 60 Co and 35 to 300 Gy/min for electrons when the insects were irradiated at 2500 Gy. Survival curves for each species are presented for both types of radiation. (author)

Domestic Rhodnius ecuadoriensis (Hemiptera, Reduviidae) infestation in Northern Peru: a comparative trial of detection methods during a six-month follow-up.

Science.gov (United States)

Cuba Cuba, César Augusto; Vargas, Franklin; Roldan, Judith; Ampuero, Cynthia

2003-01-01

Two passive methods in the assessment of intradomiciliary infestation by Rhodnius ecuadoriensis were tested: (i) the Gomes Nu ez sensor box (GN), (ii) sheets of white typing paper and (iii) one active timed manual method. The study was carried out in the Alto Chicama River Valley, Province of Gran Chim , Department of La Libertad. The study design consisted of an initial searching of triatomines inside of the domestic environment by the manual capture active procedure (man/hour) covering all the studied houses. Then, matched pairs of GN boxes and paper sheets were simultaneously installed in the bedrooms of 207 households distributed in 19 localities. A comparative prospective trial of these passive detection devices were monitored at 2, 4 and, finally 6 months follow-up. Parasitological Trypanosoma rangeli and/or T. cruzi infections were investigated in two houses with high level of infestation by R. ecuadoriensis. 16.9% of the 207 households investigated by an initial active manual method were infested with R. ecuadoriensis. The proportion of infested houses fluctuated from 6.2 to 55.5% amongst the 19 localities investigated. T. rangeli natural infection was detected in R. ecuadoriensis specimens collected in two households. Parasite rates in the bugs ranged from 16.6 to 21.7% respectively. The most striking fact was an average rate of salivary gland infection ranging from 7.4 to 8.3%. At the end of the sixth month period, a cumulative incidence of 31.4% of positive GN boxes against 15.9% for paper sheets was recorded. All three methods combined detected domestic infestation in 129 (62.3%) of the 207 houses studied in the 19 localities. The range of houses infested varies from 6.7% to 92.9%. In areas with low bug density infestation rates, the methodology experienced in our studies, seems to be the best choice for investigations on domestic R. ecuadoriensis populations.

Microbes, molecules, maladies and man | Duse | South African ...

African Journals Online (AJOL)

South African Medical Journal. Journal Home · ABOUT THIS JOURNAL · Advanced Search · Current Issue · Archives · Journal Home > Vol 92, No 3 (2002) >. Log in or Register to get access to full text downloads. Username, Password, Remember me, or Register. Microbes, molecules, maladies and man. AG Duse. Abstract.

Armillifer armillatus infestation in Human; public health scenario of a ...

African Journals Online (AJOL)

We report cases of Armillifer Armillatus infestation in three Nigerian adults within two and half years in our health facility. The first patient was a 70 year old farmer and a regular consumer of snake meat for over 50 years. He presented in February, 2014 for follow-up visit as he was a known systemic hypertensive patient.

Mitochondrial genome sequencing reveals potential origins of the scabies mite Sarcoptes scabiei infesting two iconic Australian marsupials

OpenAIRE

Fraser, Tamieka A.; Shao, Renfu; Fountain-Jones, Nicholas M.; Charleston, Michael; Martin, Alynn; Whiteley, Pam; Holme, Roz; Carver, Scott; Polkinghorne, Adam

2017-01-01

Background Debilitating skin infestations caused by the mite, Sarcoptes scabiei, have a profound impact on human and animal health globally. In Australia, this impact is evident across different segments of Australian society, with a growing recognition that it can contribute to rapid declines of native Australian marsupials. Cross-host transmission has been suggested to play a significant role in the epidemiology and origin of mite infestations in different species but a chronic lack of gene...

Patterns of infestation by chigger mites in four diurnal lizard species from a Restinga habitat (Jurubatiba) of southeastern Brazil.

Science.gov (United States)

Cunha-Barros, M; Van Sluys, M; Vrcibradic, D; Galdino, C A; Hatano, F H; Rocha, C F

2003-08-01

We studied the parasitism by larvae of the chigger mite Eutrombicula alfreddugesi on the lizard community of Restinga de Jurubatiba, Rio de Janeiro State, Southeastern Brazil. We investigated the patterns of infestation (prevalence and intensity) of chigger mites in four sympatric lizards: Tropidurus torquatus, Mabuya agilis, M. macrorhyncha and Cnemidophorus littoralis. All lizards collected were checked for the presence of mites, which were counted under stereomicroscope. We tested the relationship between intensity of infestation and lizard body size for each species using regression analysis. The prevalences and mean intensities (+ one standard deviation) of infestation on each host species were, respectively: 100%; 86.4 + 94.6 in T. torquatus (n = 62); 100%; 20.9 + 9.3 in M. agilis (n = 7); 100%; 11.1 + 13.1 in M. macrorhyncha (n = 12); and 95.2%; 19.1 + 16.8 in C. littoralis (n = 21). Only for C. littoralis did body size significantly affect the intensity of infestation (r = 0.27, p = 0.02). For all lizard species, the body parts where chiggers occurred with the highest intensity were those of skin folds and joint regions.

Application of Laser Induced Breakdown Spectroscopy in Early Detection of Red Palm Weevil: (Rhynchophorus ferrugineus) Infestation in Date Palm

International Nuclear Information System (INIS)

Farooq, W. A.; Tawfik, Walid; Rasool, K. G.; Aldawood, A. S.

2015-01-01

The Kingdom of Saudi Arabia is one of the leading date producing countries. Unfortunately, this important fruit crop is under great threat from the red palm weevil (RPW) (Rhynchophorus ferrugineus), which is a highly invasive pest. Several techniques, including visual inspection, acoustic sensors, sniffer dogs, and pheromone traps have been tried to detect the early stages of a RPW infestation; however, each method has suffered certain logistical and implementation issues. We have applied laser induced breakdown spectroscopy (LIBS) for the early detection of RPW infestation. Through the analysis of the observed LIBS spectra of different infested and healthy samples, we have found presence of Ca, Mg, Na, C, K elements and OH, CN molecules. The spectra also reveal that with the population growth of the pest, the intensity of Mg and Ca atomic lines in LIBS spectra increases rapidly. Similar behavior is observed in the molecular lines of LIBS spectra. The obtained results indicate that the LIBS technique can be used for the early detection of RPW infestation without damaging the date palms. (paper)

Application of Laser Induced Breakdown Spectroscopy in Early Detection of Red Palm Weevil: (Rhynchophorus ferrugineus) Infestation in Date Palm

Science.gov (United States)

A. Farooq, W.; G. Rasool, K.; Walid, Tawfik; S. Aldawood, A.

2015-11-01

The Kingdom of Saudi Arabia is one of the leading date producing countries. Unfortunately, this important fruit crop is under great threat from the red palm weevil (RPW) (Rhynchophorus ferrugineus), which is a highly invasive pest. Several techniques, including visual inspection, acoustic sensors, sniffer dogs, and pheromone traps have been tried to detect the early stages of a RPW infestation; however, each method has suffered certain logistical and implementation issues. We have applied laser induced breakdown spectroscopy (LIBS) for the early detection of RPW infestation. Through the analysis of the observed LIBS spectra of different infested and healthy samples, we have found presence of Ca, Mg, Na, C, K elements and OH, CN molecules. The spectra also reveal that with the population growth of the pest, the intensity of Mg and Ca atomic lines in LIBS spectra increases rapidly. Similar behavior is observed in the molecular lines of LIBS spectra. The obtained results indicate that the LIBS technique can be used for the early detection of RPW infestation without damaging the date palms.

Ticks infesting wild and domestic animals and humans of Sri Lanka with new host records.

Science.gov (United States)

Liyanaarachchi, D R; Rajakaruna, R S; Dikkumbura, A W; Rajapakse, R P V J

2015-02-01

An island-wide collection of tick species infesting humans, domesticated and wild animals and questing ticks in domestic and peridomestic environments was carried out during 2009-2011. A total of 30,461 ticks were collected from 30 different hosts and free living stages from the ground. The collection consisted of 22 tick species from 30 different hosts recording 12 tick species from humans, 19 from domesticated animals and 21 from wild animals, with a total of 97 new host records. The most common tick species on humans were Dermacentor auratus and Amblyomma testudinairum, while Haemaphysalis intermedia, Rhipicephalus microplus and Rhipicephalus sanguineus were common in domesticated and wild animals sharing 20 host species. Among the questing ticks, immature D. auratus was the most abundant. Humans and domesticated animals were mostly infested by the nymphal stages while adult ticks were found on wild animals. High number of new host records could be due to domestic animals picking tick species from wildlife and vise versa at the human/animal interface. Habitat destruction due to forest fragmentation has lead to wild animals roaming in urban and semi-urban neighbourhoods increasing the interactions of wild animals with domesticated animals. Wild animals play a significant role as a reservoir of many tick borne infections which can easily be spread to domesticated animals and then to humans via tick infestations. Data in this paper are useful for those interested in tick infesting wild and domestic animals and humans in describing the zoonotic potential of tick borne infections. Copyright © 2014 Elsevier B.V. All rights reserved.

Impact of pine needle leachates from a mountain pine beetle infested watershed on groundwater geochemistry

Science.gov (United States)

Pryhoda, M.; Sitchler, A.; Dickenson, E.

2013-12-01

The mountain pine beetle (MPB) epidemic in the northwestern United States is a recent indicator of climate change; having an impact on the lodgepole pine forest ecosystem productivity. Pine needle color can be used to predict the stage of a MPB infestation, as they change color from a healthy green, to red, to gray as the tree dies. Physical processes including precipitation and snowfall can cause leaching of pine needles in all infestation stages. Understanding the evolution of leachate chemistry through the stages of MPB infestation will allow for better prediction of the impact of MPBs on groundwater geochemistry, including a potential increase in soil metal mobilization and potential increases in disinfection byproduct precursor compounds. This study uses batch experiments to determine the leachate chemistry of pine needles from trees in four stages of MPB infestation from Summit County, CO, a watershed currently experiencing the MPB epidemic. Each stage of pine needles undergoes four subsequent leach periods in temperature-controlled DI water. The subsequent leaching method adds to the experiment by determining how leachate chemistry of each stage changes in relation to contact time with water. The leachate is analyzed for total organic carbon. Individual organic compounds present in the leachate are analyzed by UV absorption spectra, fluorescence spectrometry, high-pressure liquid chromatography for organic acid analysis, and size exclusion chromatography. Leachate chemistry results will be used to create a numerical model simulating reactions of the leachate with soil as it flows through to groundwater during precipitation and snowfall events.

Pest Prevalence and Evaluation of Community-Wide Integrated Pest Management for Reducing Cockroach Infestations and Indoor Insecticide Residues.

Science.gov (United States)

Zha, Chen; Wang, Changlu; Buckley, Brian; Yang, Ill; Wang, Desen; Eiden, Amanda L; Cooper, Richard

2018-04-02

Pest infestations in residential buildings are common, but community-wide pest survey data are lacking. Frequent insecticide applications for controlling indoor pests leave insecticide residues and pose potential health risks to residents. In this study, a community-wide pest survey was carried out in a housing complex consisting of 258 units in 40 buildings in New Brunswick, New Jersey. It was immediately followed by implementation of an integrated pest management (IPM) program in all the cockroach-infested apartments and two bed bug apartments with the goal of eliminating pest infestations, reducing pyrethroid residues, and increasing resident satisfaction with pest control services. The IPM-treated apartments were revisited and treated biweekly or monthly for 7 mo. Initial inspection found the top three pests and their infestation rates to be as follows: German cockroaches (Blattella germanica L. [Blattodea: Blattellidae]), 28%; rodents, 11%; and bed bugs (Cimex lectularius L. [Hemiptera: Cimicidae]), 8%. Floor wipe samples were collected in the kitchens and bedrooms of 20 apartments for pyrethroid residue analysis before the IPM implementation; 17 of the 20 apartments were resampled again at 7 mo. The IPM program reduced cockroach counts per apartment by 88% at 7 wk after initial treatment. At 7 mo, 85% of the cockroach infestations found in the initial survey were eliminated. The average number of pyrethroids detected decreased significantly from 6 ± 1 (mean ± SEM) and 5 ± 1 to 2 ± 1 and 3 ± 1 in the kitchens and bedrooms, respectively. The average concentrations of targeted pyrethroids residue also decreased significantly in the kitchens and bedrooms.

Investigations on the biology, epidemiology, pathology, and control of Tunga penetrans in Brazil: VII. The importance of animal reservoirs for human infestation.

Science.gov (United States)

Pilger, Daniel; Schwalfenberg, Stefan; Heukelbach, Jörg; Witt, Lars; Mehlhorn, Heinz; Mencke, Norbert; Khakban, Adak; Feldmeier, Hermann

2008-04-01

In Brazil tungiasis is endemic in many resource-poor communities, where various domestic and sylvatic animals act as reservoirs for this zoonosis. To determine the role of animal reservoirs in human tungiasis, a cross-sectional study was performed in a traditional fishing community in northeast Brazil. The human and the animal populations were examined for the presence of embedded sand fleas and the prevalence and the intensity of infestation were correlated. The overall prevalence of tungiasis in humans was 39% (95% CI 34-43%). Of six mammal species present in the village, only cats and dogs were found infested. The prevalence in these animals was 59% (95% CI 50-68%). In households, where infested pet animals were present, a higher percentage of household members had tungiasis (42% [95% CI 30-53%] versus 27% [20-33%], p=0.02), and the intensity of the infestation was higher (six lesions versus two lesions, p=0.01). The intensity of infestation in animals correlated with the intensity of infestation in humans (rho=0.3, p=0.02). Living in a household with an infested dog or cat led to a 1.6-fold (95% CI 1.1-2.3, p=0.015) increase in the odds for the presence of tungiasis in household members in the bivariate analysis and remained a significant risk factor in the multivariate regression analysis. The study shows that in this impoverished community tungiasis is highly prevalent in humans and domestic animals. In particular, it underlines the importance to include animals in control operation aiming at the reduction of disease occurrence in the human population.

Evaluation of the speed of kill, effects on reproduction, and effectiveness in a simulated infested-home environment of sarolaner (Simparica™) against fleas on dogs.

Science.gov (United States)

Six, Robert H; Becskei, Csilla; Carter, Lori; Gale, Boyd; Young, David R; Mahabir, Sean P; Chapin, Sara; Myers, Melanie R

2016-05-30

Four studies were conducted to evaluate the speed of kill, effect on egg production, and efficacy in a simulated infested-home environment of a novel isoxazoline, sarolaner (Simparica™, Zoetis), against fleas on dogs. Individually identified and housed, purpose-bred Beagles were used in each study and were allocated randomly to groups based on pretreatment parasite counts. In two speed of kill studies, groups of dogs infested with 100 fleas prior to treatment were treated orally with placebo or sarolaner tablets providing the minimum dose of 2mg/kg and then re-infested with fleas weekly for five weeks post-treatment. Comb counts were conducted to determine the numbers of viable fleas at one to three, four, eight and 12h after treatment and each subsequent infestation. In the egg production study, sarolaner- and placebo-treated dogs were similarly challenged with fleas and at 48h after each infestation the dogs were housed for 20h in cages allowing the collection and counting of all flea eggs produced during this period. Collected eggs were incubated to evaluate hatch and development to adults. The last study used dogs housed in a flea-infested simulated-home environment. Dogs were allocated to treatment with either placebo or sarolaner tablets providing a dose of 2mg/kg once a month for three treatments. Flea infestations were assessed by comb counts (fleas were replaced on the dogs) on Days 14, 30, 44, 60, 74 and 90. The speed of kill studies demonstrated that a single 2mg/kg oral dose of sarolaner started killing fleas within three to four hours after treatment or subsequent re-infestations for up to a month, and achieved ≥98% control of fleas by eight hours after treatment or re-infestation for 28 days. In the study to assess effects on flea reproduction, a single oral treatment of sarolaner resulted in the complete cessation of egg-laying for 35 days. This rapid kill of fleas and inhibition of reproduction were confirmed in a simulated-home environment

Treatment and control of Trixacarus caviae infestation in a conventional guinea pig (Cavia porcellus) breeding colony

OpenAIRE

Nath, Anjan Jyoti

2015-01-01

A case of sarcoptic mange caused by Trixacarus caviae in a conventional guinea pig breeding colony is reported. The infestation was reported in a large colony of guinea pigs during the month of July, 2013 affecting 30 breeder guinea pigs. Severely infested animals were treated individually with subcutaneous injection of ivermectin 1 % w/v (Neomec®) at the rate of 400 µg/kg body weight 10 days apart. Three doses of ivermectin were sufficient to eliminate the parasite which tested negative afte...

Microbes from raw milk for fermented dairy products

NARCIS (Netherlands)

Wouters, J.T.M.; Ayad, E.H.E.; Hugenholtz, J.; Smit, G.

2002-01-01

Milk has a high nutritive value, not only For the new-born mammal and for the human consumer, but also for microbes. Raw milk kept at roam temperature will be liable to microbial spoilage. After some days, the milk will spontaneously become sour. This is generally due to the activity of lactic acid

Demodex spp. Infestation in a breast-cancer patient: A case report ...

African Journals Online (AJOL)

Immune system becomes suppressed in cancer patients who undergo chemotherapy, and as a result these patients become vulnerable to infestations. In our case, a 45 year-old female has been admitted to oncology clinic for a medical treatment of breast cancer. Her systematic physical examination was normal, except ...

A report on the alimentary canal helminthic infestation of stray and pet dogs in Tabriz

Directory of Open Access Journals (Sweden)

Y Gharedaghi

2008-08-01

Full Text Available From September to December 2007, fecal specimens of 100 stray and pet dogs in Tabriz were examined by saturated salt flotation and Telmann sedimentation methods to determine the prevalence of gastrointestinal helminth infestation. Helminth infestation was encountered in 31 (31% of the fecal samples examined. The eggs of two different cestodes and three different nematodes were identified in the contaminated fecal samples. The helminth eggs found were identified as Taenia hydatigena (4%, Dipylidium caninum (6%, Toxocara canis (10%, Ancylostoma caninum (6% and Trichuris vulpis (5%. No trematoda eggs and nematode larvae were found in this study.

Uncharted Microbial World: Microbes and Their Activities in the Environment

Energy Technology Data Exchange (ETDEWEB)

Harwood, Caroline; Buckley, Merry

2007-12-31

Microbes are the foundation for all of life. From the air we breathe to the soil we rely on for farming to the water we drink, everything humans need to survive is intimately coupled with the activities of microbes. Major advances have been made in the understanding of disease and the use of microorganisms in the industrial production of drugs, food products and wastewater treatment. However, our understanding of many complicated microbial environments (the gut and teeth), soil fertility, and biogeochemical cycles of the elements is lagging behind due to their enormous complexity. Inadequate technology and limited resources have stymied many lines of investigation. Today, most environmental microorganisms have yet to be isolated and identified, let alone rigorously studied. The American Academy of Microbiology convened a colloquium in Seattle, Washington, in February 2007, to deliberate the way forward in the study of microorganisms and microbial activities in the environment. Researchers in microbiology, marine science, pathobiology, evolutionary biology, medicine, engineering, and other fields discussed ways to build on and extend recent successes in microbiology. The participants made specific recommendations for targeting future research, improving methodologies and techniques, and enhancing training and collaboration in the field. Microbiology has made a great deal of progress in the past 100 years, and the useful applications for these new discoveries are numerous. Microorganisms and microbial products are now used in industrial capacities ranging from bioremediation of toxic chemicals to probiotic therapies for humans and livestock. On the medical front, studies of microbial communities have revealed, among other things, new ways for controlling human pathogens. The immediate future for research in this field is extremely promising. In order to optimize the effectiveness of community research efforts in the future, scientists should include manageable

Prominent Human Health Impacts from Several Marine Microbes: History, Ecology, and Public Health Implications

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P. K. Bienfang

2011-01-01

Full Text Available This paper overviews several examples of important public health impacts by marine microbes and directs readers to the extensive literature germane to these maladies. These examples include three types of dinoflagellates (Gambierdiscus spp., Karenia brevis, and Alexandrium fundyense, BMAA-producing cyanobacteria, and infectious microbes. The dinoflagellates are responsible for ciguatera fish poisoning, neurotoxic shellfish poisoning, and paralytic shellfish poisoning, respectively, that have plagued coastal populations over time. Research interest on the potential for marine cyanobacteria to contribute BMAA into human food supplies has been derived by BMAA's discovery in cycad seeds and subsequent implication as the putative cause of amyotrophic lateral sclerosis/parkinsonism dementia complex among the Chamorro people of Guam. Recent UPLC/MS analyses indicate that recent reports that BMAA is prolifically distributed among marine cyanobacteria at high concentrations may be due to analyte misidentification in the analytical protocols being applied for BMAA. Common infectious microbes (including enterovirus, norovirus, Salmonella, Campylobacter, Shigella, Staphylococcus aureus, Cryptosporidium, and Giardia cause gastrointestinal and skin-related illness. These microbes can be introduced from external human and animal sources, or they can be indigenous to the marine environment.

Expression Profiling of Selected Glutathione Transferase Genes in Zea mays (L.) Seedlings Infested with Cereal Aphids

Science.gov (United States)

Sytykiewicz, Hubert; Chrzanowski, Grzegorz; Czerniewicz, Paweł; Sprawka, Iwona; Łukasik, Iwona; Goławska, Sylwia; Sempruch, Cezary

2014-01-01

The purpose of this report was to evaluate the expression patterns of selected glutathione transferase genes (gst1, gst18, gst23 and gst24) in the tissues of two maize (Zea mays L.) varieties (relatively resistant Ambrozja and susceptible Tasty Sweet) that were colonized with oligophagous bird cherry-oat aphid (Rhopalosiphum padi L.) or monophagous grain aphid (Sitobion avenae L.). Simultaneously, insect-triggered generation of superoxide anion radicals (O2 •−) in infested Z. mays plants was monitored. Quantified parameters were measured at 1, 2, 4, 8, 24, 48 and 72 h post-initial aphid infestation (hpi) in relation to the non-infested control seedlings. Significant increases in gst transcript amounts were recorded in aphid-stressed plants in comparison to the control seedlings. Maximal enhancement in the expression of the gst genes in aphid-attacked maize plants was found at 8 hpi (gst23) or 24 hpi (gst1, gst18 and gst24) compared to the control. Investigated Z. mays cultivars formed excessive superoxide anion radicals in response to insect treatments, and the highest overproduction of O2 •− was noted 4 or 8 h after infestation, depending on the aphid treatment and maize genotype. Importantly, the Ambrozja variety could be characterized as having more profound increments in the levels of gst transcript abundance and O2 •− generation in comparison with the Tasty Sweet genotype. PMID:25365518

Parasites of domestic and wild animals in South Africa. L. Ixodid ticks infesting horses and donkeys.

Science.gov (United States)

Horak, Ivan G; Heyne, Heloise; Halajian, Ali; Booysen, Shalaine; Smit, Willem J

2017-02-28

The aim of the study was to determine the species spectrum of ixodid ticks that infest horses and donkeys in South Africa and to identify those species that act as vectors of disease to domestic livestock. Ticks were collected opportunistically from 391 horses countrywide by their owners or grooms, or by veterinary students and staff at the Faculty of Veterinary Science, University of Pretoria. Ticks were also collected from 76 donkeys in Limpopo Province, 2 in Gauteng Province and 1 in North West province. All the ticks were identified by means of a stereoscopic microscope. Horses were infested with 17 tick species, 72.1% with Rhipicephalus evertsi evertsi, 19.4% with Amblyomma hebraeum and 15.6% with Rhipicephalus decoloratus. Rhipicephalus evertsi evertsi was recovered from horses in all nine provinces of South Africa and R. decoloratus in eight provinces. Donkeys were infested with eight tick species, and 81.6% were infested with R. evertsi evertsi, 23.7% with A. hebraeum and 10.5% with R. decoloratus. Several tick species collected from the horses and donkeys are the vectors of economically important diseases of livestock. Rhipicephalus evertsi evertsi is the vector of Theileria equi, the causative organism of equine piroplasmosis. It also transmits Anaplasma marginale, the causative organism of anaplasmosis in cattle. Amblyomma hebraeum is the vector of Ehrlichia ruminantium, the causative organism of heartwater in cattle, sheep and goats, whereas R. decoloratus transmits Babesia bigemina, the causative organism of babesiosis in cattle.

Establishment of Black Ant (Dolichoderus thoracicuson Cocoa Plantation and Its Effects on Helopeltisspp. Infestation

Directory of Open Access Journals (Sweden)

Soekadar Wiryadiputra

2007-05-01

Full Text Available Black ant (Dolichoderus thoracicusis the efficient biological control agent in suppressing main cocoa pests. It was reported that besides controlling the cocoa mirids, Helopeltisspp., this agent also can be used for biological control of cocoa pod borer (Conopomorpha cramerellaand rodents pest. Nevertheles, establishment of black ant in cocoa plantation is difficult. The objectives of research were to obtain the best method of black ant establisment and to know its effect on suppressing population and infestation of Helopeltis spp. The experiment was conducted on two cocoa ecosystems, namely cocoa plantation with coconut shading trees and with Gliricidia sepium shading trees. There were six methods of black ant establisment tried using a combination between black ant nest types and innoculation of mealybug (Cataenococcus hispidus. A control plot also added on these trial, therefore seven treatments were tried in this experiment and each treatmentwasreplicated three times. The results revealedthat on cocoa shaded by coconuts, ant establishment by the nests of coconut leaves combined with mealybug(Cataenococcus hispidusinoculation on husk wedges were the best method and could effectively control Helopeltis infestation. Good results of ant establishment also occurred on cocoa shaded by Gliricidia but its effect on Helopeltis infestation has not been significant. Four months after establishment of black ant on cocoa with coconut shading trees, Helopeltisspp. population on the plots treated by coconut leaves nest combined with innoculation of mealybug using husk wedges were very low, namely only one Helopeltisper 36 cocoa trees, whereas on control plot reaches of 85 Helopeltis. Infestation of Helopeltis measured by percentage of trees occupied by Helopeltisper 36 cocoa trees in the same period and treatment plot revealed also very low, namely 1.04% compared to 27.86% on that of the control plot. Key words : Cocoa, black ant (Dolichoderus thoracicus

MicrobesFlux: a web platform for drafting metabolic models from the KEGG database

Directory of Open Access Journals (Sweden)

Feng Xueyang

2012-08-01

Full Text Available Abstract Background Concurrent with the efforts currently underway in mapping microbial genomes using high-throughput sequencing methods, systems biologists are building metabolic models to characterize and predict cell metabolisms. One of the key steps in building a metabolic model is using multiple databases to collect and assemble essential information about genome-annotations and the architecture of the metabolic network for a specific organism. To speed up metabolic model development for a large number of microorganisms, we need a user-friendly platform to construct metabolic networks and to perform constraint-based flux balance analysis based on genome databases and experimental results. Results We have developed a semi-automatic, web-based platform (MicrobesFlux for generating and reconstructing metabolic models for annotated microorganisms. MicrobesFlux is able to automatically download the metabolic network (including enzymatic reactions and metabolites of ~1,200 species from the KEGG database (Kyoto Encyclopedia of Genes and Genomes and then convert it to a metabolic model draft. The platform also provides diverse customized tools, such as gene knockouts and the introduction of heterologous pathways, for users to reconstruct the model network. The reconstructed metabolic network can be formulated to a constraint-based flux model to predict and analyze the carbon fluxes in microbial metabolisms. The simulation results can be exported in the SBML format (The Systems Biology Markup Language. Furthermore, we also demonstrated the platform functionalities by developing an FBA model (including 229 reactions for a recent annotated bioethanol producer, Thermoanaerobacter sp. strain X514, to predict its biomass growth and ethanol production. Conclusion MicrobesFlux is an installation-free and open-source platform that enables biologists without prior programming knowledge to develop metabolic models for annotated microorganisms in the KEGG

Natural Field Infestation of Mangifera casturi and Mangifera lalijiwa by Oriental Fruit Fly, Bactrocera dorsalis (Diptera: Tephritidae)

Science.gov (United States)

McQuate, Grant T; Sylva, Charmaine D; Liquido, Nicanor J

2017-01-01

Mango, Mangifera indica (Anacardiaceae), is a crop cultivated pantropically. There are, however, many other Mangifera spp (“mango relatives”) which have much more restricted distributions and are poorly known but have potential to produce mango-like fruits in areas where mangoes do not grow well or could be tapped in mango breeding programs. Because of the restricted distribution of many of the Mangifera spp, there has also been limited data collected on susceptibility of their fruits to infestation by tephritid fruit flies which is important to know for concerns both for quality of production and for quarantine security of fruit exports. Here, we report on natural field infestation by the oriental fruit fly, Bactrocera dorsalis (Diptera: Tephritidae), of two mango relatives native to Indonesia: Mangifera casturi and Mangifera lalijiwa. Rates of infestation of fruits of these two Mangifera spp by tephritid fruit flies have not previously been reported. PMID:28890657

Factors influencing the prevalence and infestation levels of Varroa destructor in honeybee colonies in two highland agro-ecological zones of Uganda.

Science.gov (United States)

Chemurot, Moses; Akol, Anne M; Masembe, Charles; de Smet, Lina; Descamps, Tine; de Graaf, Dirk C

2016-04-01

Varroa mites are ecto-parasites of honeybees and are a threat to the beekeeping industry. We identified the haplotype of Varroa mites and evaluated potential factors that influence their prevalence and infestation levels in the eastern and western highland agro-ecological zones of Uganda. This was done by collecting samples of adult worker bees between December 2014 and September 2015 in two sampling moments. Samples of bees were screened for Varroa using the ethanol wash method and the mites were identified by molecular techniques. All DNA sequences obtained from sampled mite populations in the two zones were 100 % identical to the Korean Haplotype (AF106899). Mean mite prevalence in the apiaries was 40 and 53 % for the western and eastern zones, respectively, during the first sampling. Over the second sampling, mean mite prevalence increased considerably in the western (59 %) but not in the eastern (51 %) zone. Factors that were associated with Varroa mite infestation levels include altitude, nature of apiary slope and apiary management practices during the first sampling. Our results further showed that Varroa mites were spreading from lower to higher elevations. Feral colonies were also infested with Varroa mites at infestation levels not significantly different from those in managed colonies. Colony productivity and strength were not correlated to mite infestation levels. We recommend a long-term Varroa mite monitoring strategy in areas of varying landscape and land use factors for a clear understanding of possible changes in mite infestation levels among African honeybees for informed decision making.

[Origin of the plague microbe Yersinia pestis: structure of the process of speciation].

Science.gov (United States)

Suntsov, V V

2012-01-01

The origin and evolution of the plague microbe Yersinia pestis are considered in the context of propositions of modern Darwinism. It was shown that the plague pathogen diverged from the pseudotuberculous microbe Yersinia pseudotuberculosis O:1b in the mountain steppe landscapes of Central Asia in the Sartan: 22000-15000 years ago. Speciation occurred in the tarbagan (Marmota sibirica)--flea (Oropsylla silantiewi) parasitic system. The structure of the speciation process included six stages: isolation, genetic drift, enhancement of intrapopulational polymorphism, the beginning of pesticin synthesis (genetic conflict and emergence of hiatus), specialization (stabilization of characteristics), and adaptive irradiation (transformation of the monotypic species Y. pestis tarbagani into a polytypic species). The scenario opens up wide prospects for construction of the molecular phylogeny of the plague microbe Y. pestis and for investigation of the biochemical and molecular-genetic aspects of "Darwinian" evolution of pathogens from many other nature-focal infections.

Influence des herbicides sur l'infestation par les adventices, la ...

African Journals Online (AJOL)

SARAH

30 juin 2015 ... Keywords: Wheat, herbicides, weed, density, dry matter. INTRODUCTION. Une des raisons majeures de la chute des rendements des cultures céréalières comme les blés dans la zone «non chernozem» de la Russie et le reste du monde, demeure une forte infestation par différentes espèces adventices.

First record of Megaselia scalaris (Loew (Diptera: Phoridae infesting laboratory stocks of mantids (Parastagmatoptera tessellata, Saussure

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N. Mongiardino Koch

2013-03-01

Full Text Available We report the first record of Megaselia scalaris (Loew infesting laboratory stocks of the praying mantis (Parastagmatoptera tessellata, Saussure. M. scalaris, the scuttle fly, is a cosmopolitan species with a broad niche as it performs as detritivore, facultative parasite, and parasitoid. M. scalaris larvae were found feeding inside adult mantids and, when development was completed, pupae were found inside the abdominal cavity and around the body. We discuss the presence of colonies of crickets bred as prey for the mantids as a facilitator of M. scalaris infestation.

Mosquito larval productivity in rice-fields infested with Azolla in Mvomero District, Tanzania.

Science.gov (United States)

Mwingira, V S; Mayala, B K; Senkoro, K P; Rumisha, S F; Shayo, E H; Mlozi, M R S; Mboera, L E G

2009-01-01

Azolla (Salviniales: Azollaceae) is known to reduce oviposition and adult emergence of a number of mosquito species. Several species of Azolla are reportedly indigenous to Tanzania. However, the potential of Azolla as a biocontrol agent against malaria mosquitoes has not been evaluated in the country. This cross-sectional study was carried out to assess mosquito larval productivity in irrigated rice-fields infested with Azolla in Mvomero District, Tanzania. A systematic larval sampling covering all open water bodies along designed transect was carried in rice-fields. Larval density was estimated by dipping water bodies with or without Azolla. The degree of Azolla coverage was categorized as 0%, 80%. Larvae densities were categorised as low ( or = 500/m2) productivity. A total of 120 water bodies were surveyed and 105 (87.5%) had Azolla microphyla and A. pinnata at varying degrees of coverage. Of the total 105 water bodies with Azolla, 80 (76.2%) had a green Azolla mat, and 25 (23.8%) a brown Azolla mat. Eighty-eight (73.3%) of the sites were infested with anophelines and 109 (90.8%) with culicine larvae. Seventy percent of all water bodies contained anophelines and culicines in sympatric breeding, while 20.8% and 3.3% had only culicines and anophelines, respectively. The majority (82%) of mosquito breeding sites were found in area with Azolla substrate. Mosquito larva productivity was low in sites with highest (>80%) Azolla coverage. Seventy-two (81.8%) of the anopheline and 90 (82.6%) culicine breeding sites were infested with Azolla. Water bodies infested with green Azolla were more productive than those covered by brown coloured Azolla substrates for both culicines (13%) and anophelines (8%). Of the 1537 field collected larvae that hatched to adult stage, 646 (42.03%) were Anopheles gambiae s.l., 42 (2.73%) were An. funestus and 769 (50.03%) were Culex quinquefasciatus. These findings suggest that the mosquito productivity is low when the Azolla coverage is high

Control of Ectoparasitic Monogenean Infestation on GIFT Tilapia (Oreochromis sp. using Salt Addition

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Yani Hadiroseyani

2009-07-01

Full Text Available Ectoparasitic monogenean infestation is one of fish diseases which may cause mass mortality, therefore controlling the parasites is one of the important factors to ensure the success of aquaculture activities. Salt addition is one of disease curative and controlling techniques which is cheap, easy and environmental friendly as well as effective to control ectoparasites in freshwater environment. The objectives of this study were to examine monogenean parasites species in GIFT (Genetically Improved Farmed Tilapia tilapia, their tolerance to salt concentration and the most effective salt concentration to control the parasites. Identification, intensity and prevalence of parasitic monogenean were carried out on the external parts (body surface, fins and gills of 31 fishes. Subsequently, two different experiments were carried out  to determine parasites and fish resistance on various salt concentration at a range of 0 - 24 g/l with an interval of 2 g/l. To confirm the results of previous experiment, parasites infected fish was immersed in salt water at various concentration based on previous experiments. Two genera of monogenean were identified in GIFT tilapia, i.e. Gyrodactylus sp. on body surface and fins, and Cichlidogyrus sp. on gills with the same prevalence (100%. The intensity of those parasites was different, namely 27.84 ind/fish for Gyrodactylus sp. and 6.06 ind/fish for Cichlidogyrus sp. The intensity of both parasites was found to be lower as salt concentration increase. Salt concentration of 24 g/l was the most effective concentration to reduce parasites infestation and could totally treat the infested fish within 6 days. Keyword : tilapia, Oreochromis, monogenea, parasite and salt     ABSTRAK Serangan monogenea ektoparasitik merupakan salah satu masalah penyakit ikan yang dapat menyebabkan kematian masal, sehingga pengendaliannya merupakan salah satu kunci keberhasilan dalam usaha budidaya. Garam merupakan agen penyembuh atau

Microbe participation in aroma production during soy sauce fermentation.

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Harada, Risa; Yuzuki, Masanobu; Ito, Kotaro; Shiga, Kazuki; Bamba, Takeshi; Fukusaki, Eiichiro

2018-06-01

Soy sauce is a traditional Japanese fermented seasoning that contains various constituents such as amino acids, organic acids, and volatiles that are produced during the long fermentation process. Although studies regarding the correlation between microbes and aroma constituents have been performed, there are no reports about the influences of the microbial products, such as lactic acid, acetic acid, and ethanol, during fermentation. Because it is known that these compounds contribute to microbial growth and to changes in the constituent profile by altering the moromi environment, understanding the influence of these compounds is important. Metabolomics, the comprehensive study of low molecular weight metabolites, is a promising strategy for the deep understanding of constituent contributions to food characteristics. Therefore, the influences of microbes and their products such as lactic acid, acetic acid, and ethanol on aroma profiles were investigated using gas chromatography/mass spectrometry (GC/MS)-based metabolic profiling. The presence of aroma constituents influenced by microbes and chemically influenced by lactic acid, acetic acid, and ethanol were proposed. Most of the aroma constituents were not produced by adding ethanol alone, confirming the participation of yeast in aroma production. It was suggested that lactic acid bacterium relates to a key aromatic compound, 2,5-dimethyl-4-hydroxy-3(2H)-furanone. However, most of the measured aroma constituents changed similarly in both samples with lactic acid bacterium and acids. Thus, it was clear that the effect of lactic acid and acetic acid on the aroma profile was significant. Copyright © 2017 The Society for Biotechnology, Japan. Published by Elsevier B.V. All rights reserved.

Prevention of head louse infestation: a randomised, double-blind, cross-over study of a novel concept product, 1% 1,2-octanediol spray versus placebo.

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Burgess, Ian F; Brunton, Elizabeth R; French, Rebecca; Burgess, Nazma A; Lee, Peter N

2014-05-30

To determine whether regular use of a spray containing 1,2-octanediol 1%, which has been shown to inhibit survival of head lice, is able to work as a preventive against establishment of new infestations. Randomised, double-blind, cross-over, community study in Cambridgeshire, UK. 63 male and female schoolchildren aged 4-16 years judged to have a high risk of recurrent infestation. Only the youngest member of a household attending school participated. Participants were treated to eliminate lice, randomised between 1% octanediol or placebo sprays for 6 weeks then crossed-over to the other spray for 6 weeks. Parents applied the sprays at least twice weekly or more frequently if the hair was washed. Investigators monitored weekly for infestation and replenished supplies of spray. The primary endpoint was the time taken until the first infestation event occurred. The secondary measure was safety of the product in regular use. Intention-to-treat analysis found a total of 32 confirmed infestations in 20 participants, with 9 of them infested while using both products. In these nine participants the time to first infestation showed a significant advantage to 1% octanediol (p=0.0129). Per-protocol analysis showed only trends because the population included was not large enough to demonstrate significance. There were no serious adverse events and only two adverse events possibly related to treatment, one was a case of transient erythema and another of a rash that resolved after 5 days. Routine use of 1% octanediol spray provided a significant level of protection from infestation. It was concluded that this product is effective if applied regularly and thoroughly. ISRCTN09524995. Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://group.bmj.com/group/rights-licensing/permissions.

Microbial conversion of food wastes for biofertilizer production with thermophilic lipolytic microbes

Energy Technology Data Exchange (ETDEWEB)

Tsai, Shu-Hsien; Yang, Shang-Shyng [Institute of Microbiology and Biochemistry, National Taiwan University, Taipei 10617, (Taiwan); Liu, Ching-Piao [Department of Biological Science and Technology, Meiho Institute of Technology, Pingtung 91201, (Taiwan)

2007-05-15

Food waste is approximately one quarter of the total garbage in Taiwan. To investigate the feasibility of microbial conversion of food waste to multiple functional biofertilizer, food waste was mixed with bulking materials, inoculated with thermophilic and lipolytic microbes and incubated at 50{sup o}C in a mechanical composter. Microbial inoculation enhanced the degradation of food wastes, increased the total nitrogen and the germination rate of alfalfa seed, shortened the maturity period and improved the quality of biofertilizer. In food waste inoculated with thermophilic and lipolytic Brevibacillus borstelensis SH168 for 28 days, total nitrogen increased from 2.01% to 2.10%, ash increased from 24.94% to 29.21%, crude fat decreased from 4.88% to 1.34% and the C/N ratio decreased from 18.02 to 17.65. Each gram of final product had a higher population of thermophilic microbes than mesophilic microbes. Microbial conversion of food waste to biofertilizer is a feasible and potential technology in the future to maintain the natural resources and to reduce the impact on environmental quality. (author)

Molecular markers reveal infestation dynamics of the bed bug (Hemiptera: Cimicidae) within apartment buildings.

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Booth, Warren; Saenz, Virna L; Santangelo, Richard G; Wang, Changlu; Schal, Coby; Vargo, Edward L

2012-05-01

The bed bug, Cimex lectularius L. (Hemiptera: Cimicidae), has experienced an extraordinary global resurgence in recent years, the reasons for which remain poorly understood. Once considered a pest of lower socioeconomic classes, bed bugs are now found extensively across all residential settings, with widespread infestations established in multiapartment buildings. Within such buildings, understanding the population genetic structure and patterns of dispersal may prove critical to the development of effective control strategies. Here, we describe the development of 24 high-resolution microsatellite markers through next generation 454 pyrosequencing and their application to elucidate infestation dynamics within three multistory apartment buildings in the United States. Results reveal contrasting characteristics potentially representative of geographic or locale differences. In Raleigh, NC, an infestation within an apartment building seemed to have started from a single introduction followed by extensive spread. In Jersey City, NJ, two or more introductions followed by spread are evident in two buildings. Populations within single apartments in all buildings were characterized by high levels of relatedness and low levels of diversity, indicative of foundation from small, genetically depauperate propagules. Regardless of the number of unique introductions, genetic data indicate that spread within buildings is extensive, supporting both active and human-mediated dispersal within and between adjacent rooms or apartments spanning multiple floors.

Towards a General Equation for the Survival of Microbes Transferred between Solar System Bodies

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Fries, M.; Steele, A.

2014-01-01

It should be possible to construct a general equation describing the survival of microbes transferred between Solar System bodies. Such an equation will be useful for constraining the likelihood of transfer of viable organisms between bodies throughout the lifetime of the Solar System, and for refining Planetary Protection constraints placed on future missions. We will discuss the construction of such an equation, present a plan for definition of pertinent factors, and will describe what research will be necessary to quantify those factors. Description: We will examine the case of microbes transferred between Solar System bodies as residents in meteorite material ejected from one body (the "intial body") and deposited on another (the "target body"). Any microbes transferred in this fashion will experience four distinct phases between their initial state on the initial body, up to the point where they colonize the target body. Each of these phases features phenomena capable of reducing or exterminating the initial microbial population. They are: 1) Ejection: Material is ejected from the initial body, imparting shock followed by rapid desiccation and cooling. 2) Transport: Material travels through interplanetary space to the target body, exposing a hypothetical microbial population to extended desiccation, irradiation, and temperature extremes. 3) Infall: Material is deposited on the target body, diminishing the microbial population through shock, mass loss, and heating. 4) Adaptation: Any microbes which survive the previous three phases must then adapt to new chemophysical conditions of the target body. Differences in habitability between the initial and target bodies dominate this phase. A suitable general-form equation can be assembled from the above factors by defining the initial number of microbes in an ejected mass and applying multiplicitive factors based on the physical phenomena inherent to each phase. It should be possible to present the resulting equation

Preliminary biological screening of microbes isolated from cow dung ...

African Journals Online (AJOL)

Preliminary biological screening of microbes isolated from cow dung in Kampar. KC Teo, SM Teoh. Abstract. Five distinct morphologically and physiologically isolates were isolated from cow dung at Kampar, Perak, Malaysia and cultured on nutrient agar (NA) plates. Morphological studies including microscopic examination ...

Comparison of percent hatch and fungal infestation in channel catfish eggs after copper sulfate, diquat bromide, formalin, and hydrogen peroxide treatment

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Reduced survival is often a result of fungal (Saprolegnia spp.) infestation of fish eggs. However, timely chemical treatments often limit these infestations and increase survival. The effect of copper sulfate pentahydrate (CSP - 10 mg/L), diquat bromide (25 mg/L diquat cation), formalin (433 mg/L)...

Reed canary grass observations of effects on crop stand and fibre quality caused by infestation of Epicalamus phalaridis

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S. HELLQVIST

2008-12-01

Full Text Available A severe infestation of the gall midge Epicalamus phalaridis (Diptera: Cecidomyiidaeoccurred in a field of reed canary grass, Phalaris arundinacea in northern Sweden. The midge species has potential to become a serious pest on Phalaris grown for bioenergy or fibre production. Larvae of the midge feed beneath leaf sheaths and the crop lodges in late summer. Details are given on the biology of the midge. In the infested field, population densities of the midge were very high during three consecutive years. The crop was weakened and the occurrence of weeds increased. The dry matter yields declined markedly and were after three years of midge-attack about 50% of the average yield in the preceding years. The yield dropped comparatively more when the crop was harvested in the spring as opposed to harvest in late autumn and more at a nitrogen fertilisation at 100 kg compared to 200 kg N ha–1 per year. The effect of midge attack on fibre quality was studied. The fibre properties of midge-infested parts of internodes were poor, but as midge-damaged parts are brittle, they could probably be sorted out in a fractionation process. Undamaged parts of infested internodes had the same fibre properties as those from an uninfested crop.;

Role of syrphid larvae and other predators in suppressing aphid infestations in organic lettuce on California's Central Coast.

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Smith, Hugh A; Chaney, William E; Bensen, Tiffany A

2008-10-01

Organic lettuce, Lactuca sativa L., growers on the Central Coast of California rely on conservation biological control to manage Nasonovia ribisnigri Mosley (Hemiptera: Aphididae) and other aphid pests of lettuce. In 2006, we carried out five replicated field trials to determine the importance of syrphid larvae in the suppression of N. ribisnigri and other aphids infesting organic romaine lettuce. We used Entrust, a spinosad-based insecticide approved for use on organic farms, to suppress syrphid larvae in aphid-infested romaine. Romaine treated with Entrust was unmarketable at harvest because of aphid infestation, whereas insecticide-free romaine was marketable. Syrphid larvae composed 85% or more of total predators in most trials, and they were the only predators consistently recovered from romaine that was infested with aphids early and largely aphid-free by harvest. The species mix of nonsyrphid predators varied from site to site. Applications of Entrust suppressed nonsyrphid predators in two trials, and so was an imperfect tool for selectively suppressing syrphid larvae. The relative importance of syrphid larvae and other predators in the conservation biological control of aphids in organic romaine is discussed. We conclude that syrphid larvae are primarily responsible for the suppression of aphids in organic romaine on California's Central Coast.

Infestation dynamics of the Asian longhorned beetle in the United States

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Alan Sawyer

2007-01-01

The Asian longhorned beetle (ALB), Anoplophora glabripennis (Coleoptera: Cerambycidae), is an exotic pest of Asian origin, first discovered in North America (Brooklyn, NY) in 1996. That infestation has now spread to Queens, Manhattan and Long Island, NY and Jersey City, NJ. Based on DNA profiles (Carter et al. 2005) and other evidence, independent...

The effect of Sirex noctilio infestation and fire damage on the ...

African Journals Online (AJOL)

The infection and association between the wood wasp Sirex noctilio and the fungus Amylostereum areolatum is responsible for large-scale tree mortality in the Midlands of the KwaZulu-Natal province in South Africa. An exploratory investigation on the effect of the infestation of trees by the wood wasp and its associated ...

Effects of gypsy moth infestation on aesthetic preferences and behavior intentions

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Samuel M. Brock; Steve Hollenhorst; Wayne Freimund

1991-01-01

Using the Scenic Beauty Estimator (SBE) approach, within-stand color photographs were taken of 27 forested sites representative of the Central Appalachian Plateau. These sites had been repeatedly infested by gypsy moth (Lymantria dispar) (GM) to varying degrees since 1985, with resulting tree mortality from 6% - 97%. Eighty-one slides (3 slides/site...

Soil Minerals: AN Overlooked Mediator of Plant-Microbe Competition for Organic Nitrogen in the Rhizosphere

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Grandy, S.; Jilling, A.; Keiluweit, M.

2016-12-01

Recent research on the rate limiting steps in soil nitrogen (N) availability have shifted in focus from mineralization to soil organic matter (SOM) depolymerization. To that end, Schimel and Bennett (2004) argued that together with enzymatic breakdown of polymers to monomers, microsite processes and plant-microbial competition collectively drive N cycling. Here we present new conceptual models arguing that while depolymerization is a critical first step, mineral-organic associations may ultimately regulate the provisioning of bioavailable organic N, especially in the rhizosphere. Mineral-associated organic matter (MAOM) is a rich reservoir for N in soils and often holds 5-7x more N than particulate or labile fractions. However, MAOM is considered largely unavailable to plants as a source of N due to the physicochemical forces on mineral surfaces that stabilize organic matter. We argue that in rhizosphere hotspots, MAOM is in fact a potentially mineralizable and important source of nitrogen for plants. Several biochemical strategies enable plants and microbes to compete with mineral-organic interactions and effectively access MAOM. In particular, root-deposited low molecular weight compounds in the form of root exudates facilitate the biotic and abiotic destabilization and subsequent bioavailability of MAOM. We believe that the competitive balance between the potential fates of assimilable organic N — bound to mineral surfaces or dissolved and available for assimilation — depends on the specific interaction between and properties of the clay, soil solution, mineral-bound organic matter, and microbial community. For this reason, the plant-soil-MAOM interplay is enhanced in rhizosphere hotspots relative to non-rhizosphere environments, and likely strongly regulates plant-microbe competition for N. If these hypotheses are true, we need to reconsider potential soil N cycle responses to changes in climate and land use intensity, focusing on the processes by which

Induction of direct and indirect plant responses by jasmonic acid, low spider mite densities, or a combination of jasmonic acid treatment and spider mite infestation.

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Gols, Rieta; Roosjen, Mara; Dijkman, Herman; Dicke, Marcel

2003-12-01

Jasmonic acid (JA) and the octadecanoid pathway are involved in both induced direct and induced indirect plant responses. In this study, the herbivorous mite, Tetranychus urticae, and its predator, Phytoseiulus persimilis, were given a choice between Lima bean plants induced by JA or spider mites and uninduced control plants. Infestation densities resulting in the induction of predator attractants were much lower than thus far assumed, i.e., predatory mites were significantly attracted to plants that were infested for 2 days with only one or four spider mites per plant. Phytoseiulus persimilis showed a density-dependent response to volatiles from plants that were infested with different numbers of spider mites. Similarly, treating plants with increasing concentrations of JA also led to increased attraction of P. persimilis. Moreover, the duration of spider mite infestation was positively correlated with the proportion of predators that were attracted to mite-infested plants. A pretreatment of the plants with JA followed by a spider mite infestation enhanced the attraction of P. persimilis to plant volatiles compared to attraction to volatiles from plants that were only infested with spider mites and did not receive a pretreatment with JA. The herbivore, T. urticae preferred leaf tissue that previously had been infested with conspecifics to uninfested leaf tissue. In the case of choice tests with JA-induced and control leaf tissue, spider mites slightly preferred control leaf tissue. When spider mites were given a choice between leaf discs induced by JA and leaf discs damaged by spider mite feeding, they preferred the latter. The presence of herbivore induced chemicals and/or spider mite products enhanced settlement of the mites, whereas treatment with JA seemed to impede settlement.

A Mathematical Model of Forager Loss in Honeybee Colonies Infested with Varroa destructor and the Acute Bee Paralysis Virus.

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Ratti, Vardayani; Kevan, Peter G; Eberl, Hermann J

2017-06-01

We incorporate a mathematical model of Varroa destructor and the Acute Bee Paralysis Virus with an existing model for a honeybee colony, in which the bee population is divided into hive bees and forager bees based on tasks performed in the colony. The model is a system of five ordinary differential equations with dependent variables: uninfected hive bees, uninfected forager bees, infected hive bees, virus-free mites and virus-carrying mites. The interplay between forager loss and disease infestation is studied. We study the stability of the disease-free equilibrium of the bee-mite-virus model and observe that the disease cannot be fought off in the absence of varroacide treatment. However, the disease-free equilibrium can be stable if the treatment is strong enough and also if the virus-carrying mites become virus-free at a rate faster than the mite birth rate. The critical forager loss due to homing failure, above which the colony fails, is calculated using simulation experiments for disease-free, treated and untreated mite-infested, and treated virus-infested colonies. A virus-infested colony without varroacide treatment fails regardless of the forager mortality rate.

Patterns of infestation by chigger mites in four diurnal lizard species from a restinga habitat (Jurubatiba of Southeastern Brazil

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M. Cunha-Barros

Full Text Available We studied the parasitism by larvae of the chigger mite Eutrombicula alfreddugesi on the lizard community of Restinga de Jurubatiba, Rio de Janeiro State, Southeastern Brazil. We investigated the patterns of infestation (prevalence and intensity of chigger mites in four sympatric lizards: Tropidurus torquatus, Mabuya agilis, M. macrorhyncha and Cnemidophorus littoralis. All lizards collected were checked for the presence of mites, which were counted under stereomicroscope. We tested the relationship between intensity of infestation and lizard body size for each species using regression analysis. The prevalences and mean intensities (+ one standard deviation of infestation on each host species were, respectively: 100%; 86.4 + 94.6 in T. torquatus (n = 62; 100%; 20.9 + 9.3 in M. agilis (n = 7; 100%; 11.1 + 13.1 in M. macrorhyncha (n = 12; and 95.2%; 19.1 + 16.8 in C. littoralis (n = 21. Only for C. littoralis did body size significantly affect the intensity of infestation (r = 0.27, p = 0.02. For all lizard species, the body parts where chiggers occurred with the highest intensity were those of skin folds and joint regions.

Factors affecting infestation by Triatoma infestans in a rural area of the humid Chaco in Argentina: a multi-model inference approach.

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Gurevitz, Juan M; Ceballos, Leonardo A; Gaspe, María Sol; Alvarado-Otegui, Julián A; Enríquez, Gustavo F; Kitron, Uriel; Gürtler, Ricardo E

2011-10-01

Transmission of Trypanosoma cruzi by Triatoma infestans remains a major public health problem in the Gran Chaco ecoregion, where understanding of the determinants of house infestation is limited. We conducted a cross-sectional study to model factors affecting bug presence and abundance at sites within house compounds in a well-defined rural area in the humid Argentine Chaco. Triatoma infestans bugs were found in 45.9% of 327 inhabited house compounds but only in 7.4% of the 2,584 sites inspected systematically on these compounds, even though the last insecticide spraying campaign was conducted 12 years before. Infested sites were significantly aggregated at distances of 0.8-2.5 km. The most frequently infested ecotopes were domiciles, kitchens, storerooms, chicken coops and nests; corrals were rarely infested. Domiciles with mud walls and roofs of thatch or corrugated tarred cardboard were more often infested (32.2%) than domiciles with brick-and-cement walls and corrugated metal-sheet roofs (15.1%). A multi-model inference approach using Akaike's information criterion was applied to assess the relative importance of each variable by running all possible (17,406) models resulting from all combinations of variables. Availability of refuges for bugs, construction with tarred cardboard, and host abundance (humans, dogs, cats, and poultry) per site were positively associated with infestation and abundance, whereas reported insecticide use showed a negative association. Ethnic background (Creole or Toba) adjusted for other factors showed little or no association. Promotion and effective implementation of housing improvement (including key peridomestic structures) combined with appropriate insecticide use and host management practices are needed to eliminate infestations. Fewer refuges are likely to result in fewer residual foci after insecticide spraying, and will facilitate community-based vector surveillance. A more integrated perspective that considers simultaneously

Factors Affecting Infestation by Triatoma infestans in a Rural Area of the Humid Chaco in Argentina: A Multi-Model Inference Approach

Science.gov (United States)

Gurevitz, Juan M.; Ceballos, Leonardo A.; Gaspe, María Sol; Alvarado-Otegui, Julián A.; Enríquez, Gustavo F.; Kitron, Uriel; Gürtler, Ricardo E.

2011-01-01

Background Transmission of Trypanosoma cruzi by Triatoma infestans remains a major public health problem in the Gran Chaco ecoregion, where understanding of the determinants of house infestation is limited. We conducted a cross-sectional study to model factors affecting bug presence and abundance at sites within house compounds in a well-defined rural area in the humid Argentine Chaco. Methodology/Principal Findings Triatoma infestans bugs were found in 45.9% of 327 inhabited house compounds but only in 7.4% of the 2,584 sites inspected systematically on these compounds, even though the last insecticide spraying campaign was conducted 12 years before. Infested sites were significantly aggregated at distances of 0.8–2.5 km. The most frequently infested ecotopes were domiciles, kitchens, storerooms, chicken coops and nests; corrals were rarely infested. Domiciles with mud walls and roofs of thatch or corrugated tarred cardboard were more often infested (32.2%) than domiciles with brick-and-cement walls and corrugated metal-sheet roofs (15.1%). A multi-model inference approach using Akaike's information criterion was applied to assess the relative importance of each variable by running all possible (17,406) models resulting from all combinations of variables. Availability of refuges for bugs, construction with tarred cardboard, and host abundance (humans, dogs, cats, and poultry) per site were positively associated with infestation and abundance, whereas reported insecticide use showed a negative association. Ethnic background (Creole or Toba) adjusted for other factors showed little or no association. Conclusions/Significance Promotion and effective implementation of housing improvement (including key peridomestic structures) combined with appropriate insecticide use and host management practices are needed to eliminate infestations. Fewer refuges are likely to result in fewer residual foci after insecticide spraying, and will facilitate community-based vector

Weed infestation of field crops in different soils in the protective zone of Roztocze National Park. Part II. Root crops

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Marta Ziemińska-Smyk

2013-12-01

Full Text Available The study on weed infestation of root crops in different soils in the protective zone of Roztocze National Park was conducted in the years 1991-1995. As many as 240 phytosociological records, made with the use of Braun-Blanquet method, were taken in potato and sugar beet fields. The number of weed species in sugar beet and potato in the area depended on the soil and type of root crop. In the same environment conditions. the iiuinber of weed species was higher in potato than in sugar beet. The most difficult weed species iii all types of soil were: Chenopodium album, Stellaria media and Convolvulus arvensis. Podsolic soils were highly infested by two acidophylic species: Spergula arvensis and Raphanus raphanistum. Potato in loess soil and brown soil made of loamy sands were highly infested by Echinochloa crus-galli, Equisetum arvense and Galinsoga parviflora. Root crop plantations in brown soils formed from gaizes of granulometric loam texture and limestone soils were infested by: Galium aparine, Sonchus arvensis, Sinapis arvensis and Veronica persica.

Health impacts of bedbug infestation: A case of five towns in Amhara ...

African Journals Online (AJOL)

user

areas were not considered as infestation in the study. Pretested structured questionnaire was the instrument used to gather demographic information from the household representatives. In addition, Diagnostic and. Statistical Manual of Mental Disorders (DSM-5) (21) was employed to assess the psychological and social.

Suppression of Phytophthora ramorum infestations through silvicultural treatment in California's north coast

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Yana Valachovic; Chris Lee; Brendan Twieg; David Rizzo; Richard Cobb; Radoslaw Glebocki

2013-01-01

In 2006, three forested sites infested with Phytophthora ramorum in Humboldt County, California were subjected to different combinations of treatments designed to reduce inoculum and control spread. One treatment, consisting of removal of all California bay laurel (Umbellularia californica (Hook. & Arn.) Nutt.) and tanoak...

An Astrobiology Microbes Exhibit and Education Module

Science.gov (United States)

Lindstrom, Marilyn M.; Allen, Jaclyn S.; Stocco, Karen; Tobola, Kay; Olendzenski, Lorraine

2001-01-01

Telling the story of NASA-sponsored scientific research to the public in exhibits is best done by partnerships of scientists and museum professionals. Likewise, preparing classroom activities and training teachers to use them should be done by teams of teachers and scientists. Here we describe how we used such partnerships to develop a new astrobiology augmentation to the Microbes! traveling exhibit and a companion education module. "Additional information is contained in the original extended abstract."

Patterns of Aedes aegypti (Diptera: Culicidae) infestation and container productivity measured using pupal and Stegomyia indices in northern Argentina.

Science.gov (United States)

Garelli, F M; Espinosa, M O; Weinberg, D; Coto, H D; Gaspe, M S; Gürtler, R E

2009-09-01

A citywide control program of Aedes aegypti (L.) (Diptera: Culicidae) mainly based on the use of larvicides reduced infestations but failed to achieve the desired target levels in Clorinda, northeastern Argentina, over 5 yr of interventions. To understand the underlying causes of persistent infestations and to develop new control tactics adapted to the local context, we conducted two pupal surveys in a large neighborhood with approximately 2,500 houses and recorded several variables for every container inspected in fall and spring 2007. In total, 4,076 lots and 4,267 containers were inspected over both surveys, and 8,391 Ae. aegypti pupae were collected. Large tanks used for potable water storage were the most abundant and the most productive type of container, accounting for 65-84% of all the pupae collected. Therefore, large tanks were key containers and candidates for improved targeted interventions. Multivariate analysis showed that containers located in the yard, at low sun exposure, unlidded, filled with rain water, and holding polluted water were all more likely to be infested by larvae or pupae. When only infested containers were considered, productivity of pupae was most closely associated with large tanks and rain water. A stochastic simulation model was developed to calculate the expected correlations between pupal and Stegomyia indices according to the characteristics of the distribution of larvae and pupae per container and the spatial scale at which the indices were computed. The correlation between pupal and Stegomyia indices is expected to increase as infestation levels decline.

Spatial distribution of grape root borer (Lepidoptera: Sesiidae) infestations in Virginia vineyards and implications for sampling.

Science.gov (United States)

Rijal, J P; Brewster, C C; Bergh, J C

2014-06-01

Grape root borer, Vitacea polistiformis (Harris) (Lepidoptera: Sesiidae) is a potentially destructive pest of grape vines, Vitis spp. in the eastern United States. After feeding on grape roots for ≍2 yr in Virginia, larvae pupate beneath the soil surface around the vine base. Adults emerge during July and August, leaving empty pupal exuviae on or protruding from the soil. Weekly collections of pupal exuviae from an ≍1-m-diameter weed-free zone around the base of a grid of sample vines in Virginia vineyards were conducted in July and August, 2008-2012, and their distribution was characterized using both nonspatial (dispersion) and spatial techniques. Taylor's power law showed a significant aggregation of pupal exuviae, based on data from 19 vineyard blocks. Combined use of geostatistical and Spatial Analysis by Distance IndicEs methods indicated evidence of an aggregated pupal exuviae distribution pattern in seven of the nine blocks used for those analyses. Grape root borer pupal exuviae exhibited spatial dependency within a mean distance of 8.8 m, based on the range values of best-fitted variograms. Interpolated and clustering index-based infestation distribution maps were developed to show the spatial pattern of the insect within the vineyard blocks. The temporal distribution of pupal exuviae showed that the majority of moths emerged during the 3-wk period spanning the third week of July and the first week of August. The spatial distribution of grape root borer pupal exuviae was used in combination with temporal moth emergence patterns to develop a quantitative and efficient sampling scheme to assess infestations.

Deep-Sea Microbes: Linking Biogeochemical Rates to -Omics Approaches

Science.gov (United States)

Herndl, G. J.; Sintes, E.; Bayer, B.; Bergauer, K.; Amano, C.; Hansman, R.; Garcia, J.; Reinthaler, T.

2016-02-01

Over the past decade substantial progress has been made in determining deep ocean microbial activity and resolving some of the enigmas in understanding the deep ocean carbon flux. Also, metagenomics approaches have shed light onto the dark ocean's microbes but linking -omics approaches to biogeochemical rate measurements are generally rare in microbial oceanography and even more so for the deep ocean. In this presentation, we will show by combining metagenomics, -proteomics and biogeochemical rate measurements on the bulk and single-cell level that deep-sea microbes exhibit characteristics of generalists with a large genome repertoire, versatile in utilizing substrate as revealed by metaproteomics. This is in striking contrast with the apparently rather uniform dissolved organic matter pool in the deep ocean. Combining the different -omics approaches with metabolic rate measurements, we will highlight some major inconsistencies and enigmas in our understanding of the carbon cycling and microbial food web structure in the dark ocean.

Culturing photosynthetic bacteria through surface plasmon resonance

Energy Technology Data Exchange (ETDEWEB)

Ooms, Matthew D.; Bajin, Lauren; Sinton, David [Department of Mechanical and Industrial Engineering and Centre for Sustainable Energy, University of Toronto, Toronto M5S 3G8 (Canada)

2012-12-17

In this work, cultivation of photosynthetic microbes in surface plasmon enhanced evanescent fields is demonstrated. Proliferation of Synechococcus elongatus was obtained on gold surfaces excited with surface plasmons. Excitation over three days resulted in 10 {mu}m thick biofilms with maximum cell volume density of 20% vol/vol (2% more total accumulation than control experiments with direct light). Collectively, these results indicate the ability to (1) excite surface-bound cells using plasmonic light fields, and (2) subsequently grow thick biofilms by coupling light from the surface. Plasmonic light delivery presents opportunities for high-density optofluidic photobioreactors for microalgal analysis and solar fuel production.

INTERACTIONS AMONG PHOSPHATE AMENDMENTS, MICROBES AND URANIUM MOBILITY IN CONTAMINATED SEDIMENTS

Energy Technology Data Exchange (ETDEWEB)

Knox, A

2007-08-30

The use of sequestering agents for the transformation of radionuclides in low concentrations in contaminated soils/sediments offers considerable potential for long-term environmental cleanup. This study evaluated the influence of four phosphate amendments and two microbial amendments on U availability. The synchrotron X-ray fluorescence mapping of the untreated U-contaminated sediment showed that U was closely associated with Mn. All tested phosphate amendments reduced aqueous U concentration more than 90%, likely due to formation of insoluble phosphate precipitates. The addition of A. piechaudii and P. putida alone were found to reduce U concentrations 63% and 31% respectively. Uranium sorption in phosphate treatments was significantly reduced in the presence of microbes. However, increased microbial activity in the treated sediment led to reduction of phosphate effectiveness. The average U concentration in 1 M MgCl{sub 2} extract from U amended sediment was 437 {micro}g/kg, but in the same sediment without microbes (autoclaved sediment), the extractable U concentration was only 103 {micro}g/kg. When the autoclaved amended sediment was treated with autoclaved biological apatite, U concentration in the 1 M MgCl{sub 2} extract was {approx}0 {micro}g/kg. Together these tests suggest that microbes may enhance U leaching and reduce phosphate amendment remedial effectiveness.

Interactive effects of global climate change and pollution on marine microbes: the way ahead.

Science.gov (United States)

Coelho, Francisco J R C; Santos, Ana L; Coimbra, Joana; Almeida, Adelaide; Cunha, Angela; Cleary, Daniel F R; Calado, Ricardo; Gomes, Newton C M

2013-06-01

Global climate change has the potential to seriously and adversely affect marine ecosystem functioning. Numerous experimental and modeling studies have demonstrated how predicted ocean acidification and increased ultraviolet radiation (UVR) can affect marine microbes. However, researchers have largely ignored interactions between ocean acidification, increased UVR and anthropogenic pollutants in marine environments. Such interactions can alter chemical speciation and the bioavailability of several organic and inorganic pollutants with potentially deleterious effects, such as modifying microbial-mediated detoxification processes. Microbes mediate major biogeochemical cycles, providing fundamental ecosystems services such as environmental detoxification and recovery. It is, therefore, important that we understand how predicted changes to oceanic pH, UVR, and temperature will affect microbial pollutant detoxification processes in marine ecosystems. The intrinsic characteristics of microbes, such as their short generation time, small size, and functional role in biogeochemical cycles combined with recent advances in molecular techniques (e.g., metagenomics and metatranscriptomics) make microbes excellent models to evaluate the consequences of various climate change scenarios on detoxification processes in marine ecosystems. In this review, we highlight the importance of microbial microcosm experiments, coupled with high-resolution molecular biology techniques, to provide a critical experimental framework to start understanding how climate change, anthropogenic pollution, and microbiological interactions may affect marine ecosystems in the future.

Effect of azadirachtin on haematological and biochemical parameters of Argulus-infested goldfish Carassius auratus (Linn. 1758).

Science.gov (United States)

Kumar, Saurav; Raman, R P; Kumar, Kundan; Pandey, P K; Kumar, Neeraj; Mallesh, B; Mohanty, Snatashree; Kumar, Abhay

2013-08-01

Argulosis hampers aquaculture production and alters the host physiology and growth. Azadirachtin is recognized as a potential antiparasitic agent against Argulus sp. The present study aimed to investigate the effect of different concentration of azadirachtin solution on haematological and serum biochemical parameters of Argulus-infested goldfish Carassius auratus. Ninety Argulus-infested goldfish were randomly divided into six equal groups. Fish of group 1-5 were treated with azadirachtin solution through bath of 1, 5, 10, 15 and 20 mg L(-1) as T1, T2, T3, T4 and T5, respectively, and group 6 was exposed to 2% DMSO solution without azadirachtin and considered as negative control T0(-). Along with six treatment groups, a positive control T0(+) of healthy goldfish free from Argulus infestation was also maintained. Parasitic mortality was evaluated after 3 days of consecutive bath treatment. After 7 days of post-treatment, the blood and serum were drawn from each of the treatment groups and haematological and serum biochemical parameters were evaluated. Total leucocyte count (TLC), mean corpuscular volume (MCV), mean corpuscular haemoglobin (MCH), blood glucose, total protein (TP), globulin, serum glutamate oxaloacetate transaminase (SGOT) and serum glutamate pyruvate transaminase (SGPT) were significantly (p azadirachtin have notable effects on activity of vital tissues function and physiology of the host. Argulus spp. from infested goldfish could be eliminated using bath treatment with solution of azadirachtin having concentration of 15 mg L(-1) and that also shifted haematological and serum biochemical parameters towards homeostasis.

Efficacy and safety assessment of a water-soluble formulation of fluralaner for treatment of natural Ornithonyssus sylviarum infestations in laying hens

Directory of Open Access Journals (Sweden)

Nancy C. Hinkle

2018-02-01

Full Text Available Abstract Background Northern fowl mite, Ornithonyssus sylviarum (Canestrini & Fanzago, 1877, infestations can stress birds, impairing welfare and causing substantial economic losses. A study was undertaken to determine the efficacy of an ectoparasiticide solution (fluralaner for oral administration in the treatment of mite-infested hens. Methods Clinically healthy, naturally mite-infested laying hens (n = 132, approximately 32 weeks of age, were ranked by Day -9 mite vent counts and randomized among 12 study pens, each to hold one of four treatment groups. Three groups received fluralaner-medicated water by oral gavage at dose rates of 0.25, 0.5 or 1.0 mg/kg on Days 0 and 7; one group was an untreated control (three pens for each group. Five naturally infested untreated birds were included in each pen to act as mite-infested source birds. Thus each pen, treated and control, had six non-source birds for assessment of efficacy, plus five source birds to provide ongoing challenge. Primary efficacy assessments were based on mean O. sylviarum vent counts from non-source birds in the control and treated group pens on Days 1, 2, 6, 8, 12, 15, 19, 22 and 26. Results Source-birds maintained infestations throughout the study, validating the challenge to study birds. On Days 1 through 22, mean control group mite counts were significantly greater than those of the treated groups (P ≤ 0.013. Relative to the control group, mean O. sylviarum counts were reduced by at least 90% from Day 6 through Days 19, 22 and 22 in the fluralaner 0.25, 0.5 and 1.0 mg/kg groups, respectively. On Day 19, mean mite counts were lower in the 0.5 and 1.0 mg/kg groups compared with the 0.25 mg/kg group (P ≤ 0.018, and in the 1.0 mg/kg compared with the 0.5 mg/kg group (P = 0.014. There were no adverse events in treated birds. Conclusions A fluralaner solution administered twice by gavage to laying hens with a one-week between-treatment interval was safe

Microbes in biological processes for municipal landfill leachate treatment: Community, function and interaction

DEFF Research Database (Denmark)

Zhang, Duoying; Vahala, Riku; Wang, Yu

2016-01-01

Landfill leachate (LFL) contains high strength of ammonium and complex organic substances including biodegradable volatile fatty acids (VFAs), refractory aquatic humic substances (AHS) and micro-scale xenobiotic organic chemicals (XOCs), which promotes the diverse microbial community in LFL...... treatment bioreactors. These microbes cooperate to remove nitrogen, biodegrade organic matters, eliminate the toxicity of XOCs and produce energy. In these diverse microbes, some show dominant in the bioreactor and are prevalent in many kinds of LFL treatment bio-processes, such as Brocadia from the phylum...

Dynamique d'infestation de la forêt classée de Sanaimbo par les adventices à partir des agro-écosystèmes environnants

Directory of Open Access Journals (Sweden)

Touré, A.

2016-01-01

Full Text Available Dynamics of Infestation in the Sanaimbo Protected Forest by Weeds from Surrounding Agro-ecosystems. The infestation dynamics of the Sanaimbo Protected Forest by weeds was evaluated with the aim to quantify the impact of weeds on the original flora of this locality. Floristic and phytosociological surveys samples were carried out on plots located inside and outside the forest. The frequency and proportion of biological types is different in plots located outside and within the classified forest. Chromolaena odorata (L. King & H.E. Robins has a high degree of infestation whatever the plot location. Euphorbia heterophylla L., Ageratum conyzoides L. and Panicum laxum Sw. show high levels of infestation in the plots out of the forest and start invading slowly the plots within the forest.

Nutrient-Dependent Impact of Microbes on Drosophila suzukii Development

Directory of Open Access Journals (Sweden)

XiaoLi Bing

2018-03-01

Full Text Available Drosophila suzukii Matsumura is an invasive species of vinegar fly that has become a prominent pest of berries and other soft-skinned fruits. Unlike most other Drosophila species, female D. suzukii flies lay their eggs in ripening and ripe fruits and larvae develop within the fruit. To understand how D. suzukii larvae utilize ripe and ripening fruits, which usually have low levels of protein, we investigated the microbiota of field-captured and laboratory-reared D. suzukii flies and further examined the combined influence of diet and microbes on host fitness. Field-captured flies were associated with diverse microbiota, which varied significantly with sampling location and season. In contrast, laboratory-reared flies possessed strikingly lower bacterial abundance and diversity. A comparison of conventionally reared (CR and germ-free (GF flies revealed that the microbiota of D. suzukii does not alter its development significantly but decreases its life span under conditions of a nutrient-sufficient diet. However, the microbiota is essential for D. suzukii development on strawberry-based or blueberry-based fruit diets. This developmental failure could be rescued by reassociation with single bacterial or fungal species or by the addition of a high quantity of heat-killed microbes. In addition, we found that proteins are limiting with respect to fly development on fruit-based diets and that GF flies show signs of protein starvation. Taken together, our study results demonstrate that the microbiota provides key proteins required for the development of D. suzukii reared on fresh fruit. Our work shows that the impact of microbes on fly fitness depends strongly on nutritional conditions.

Nutrient-Dependent Impact of Microbes on Drosophila suzukii Development

Science.gov (United States)

Bing, XiaoLi; Gerlach, Joseph; Loeb, Gregory

2018-01-01

ABSTRACT Drosophila suzukii Matsumura is an invasive species of vinegar fly that has become a prominent pest of berries and other soft-skinned fruits. Unlike most other Drosophila species, female D. suzukii flies lay their eggs in ripening and ripe fruits and larvae develop within the fruit. To understand how D. suzukii larvae utilize ripe and ripening fruits, which usually have low levels of protein, we investigated the microbiota of field-captured and laboratory-reared D. suzukii flies and further examined the combined influence of diet and microbes on host fitness. Field-captured flies were associated with diverse microbiota, which varied significantly with sampling location and season. In contrast, laboratory-reared flies possessed strikingly lower bacterial abundance and diversity. A comparison of conventionally reared (CR) and germ-free (GF) flies revealed that the microbiota of D. suzukii does not alter its development significantly but decreases its life span under conditions of a nutrient-sufficient diet. However, the microbiota is essential for D. suzukii development on strawberry-based or blueberry-based fruit diets. This developmental failure could be rescued by reassociation with single bacterial or fungal species or by the addition of a high quantity of heat-killed microbes. In addition, we found that proteins are limiting with respect to fly development on fruit-based diets and that GF flies show signs of protein starvation. Taken together, our study results demonstrate that the microbiota provides key proteins required for the development of D. suzukii reared on fresh fruit. Our work shows that the impact of microbes on fly fitness depends strongly on nutritional conditions. PMID:29559576

Influence of Agronomic and Climatic Factors on Fusarium Infestation and Mycotoxin Contamination of Cereals in Norway

Science.gov (United States)

Bernhoft, A.; Torp, M.; Clasen, P.-E.; Løes, A.-K.; Kristoffersen, A.B.

2012-01-01

A total of 602 samples of organically and conventionally grown barley, oats and wheat was collected at grain harvest during 2002–2004 in Norway. Organic and conventional samples were comparable pairs regarding cereal species, growing site and harvest time, and were analysed for Fusarium mould and mycotoxins. Agronomic and climatic factors explained 10–30% of the variation in Fusarium species and mycotoxins. Significantly lower Fusarium infestation and concentrations of important mycotoxins were found in the organic cereals. The mycotoxins deoxynivalenol (DON) and HT-2 toxin (HT-2) constitute the main risk for human and animal health in Norwegian cereals. The impacts of various agronomic and climatic factors on DON and HT-2 as well as on their main producers F. graminearum and F. langsethiae and on total Fusarium were tested by multivariate statistics. Crop rotation with non-cereals was found to reduce all investigated characteristics significantly – mycotoxin concentrations as well as various Fusarium infestations. No use of mineral fertilisers and herbicides was also found to decrease F. graminearum, whereas lodged fields increased the occurrence of this species. No use of herbicides was also found to decrease F. langsethiae, but for this species the occurrence was lower in lodged fields. Total Fusarium infestation was decreased with no use of fungicides or mineral fertilisers, and with crop rotation, as well as by using herbicides and increased by lodged fields. Clay and to some extent silty soils seemed to reduce F. graminearum in comparison with sandy soils. Concerning climate factors, low temperature before grain harvest was found to increase DON; and high air humidity before harvest to increase HT-2. F. graminearum was negatively correlated with precipitation in July but correlated with air humidity before harvest. F. langsethiae was correlated with temperature in July. Total Fusarium increased with increasing precipitation in July. Organic cereal

Southern pine beetle infestation probability mapping using weights of evidence analysis

Science.gov (United States)

Jason B. Grogan; David L. Kulhavy; James C. Kroll

2010-01-01

Weights of Evidence (WofE) spatial analysis was used to predict probability of southern pine beetle (Dendroctonus frontalis) (SPB) infestation in Angelina, Nacogdoches, San Augustine and Shelby Co., TX. Thematic data derived from Landsat imagery (1974–2002 Landsat 1–7) were used. Data layers included: forest covertype, forest age, forest patch size...

Seasonal variation of infestation by ectoparasitic chigger mite larvae (Acarina: Trombiculidae) on resident and migratory birds in coffee agroecosystems of Chiapas, Mexico.

Science.gov (United States)

Dietsch, Thomas V

2005-12-01

Parasitism is not well documented for birds found in tropical habitats. Long-distance migratory birds may face additional risks to an already hazardous journey when infected. This study explores the ecology of an ectoparasite infestation in Chiapas, Mexico. During a mist-netting project in 2 different coffee management systems, chigger mites (Acarina: Trombiculidae), ectoparasitic during the larval stage, were found on both resident and migratory birds. Using a rapid assessment protocol, it was observed that 17 of 26 species of long-distance migrants and 33 of 71 resident species had at least 1 infested individual. Infestation prevalences were unexpectedly high on some long-distance migrants, as high as 0.73 for Swainson's thrush (Catharus ustulatus), a value on par with heavily infested resident species. Prevalence was highest during winter sampling: 0.18 overall, 0.16 of migrants, and 0.23 of residents. Prevalence was 0.14 for resident birds during the summer breeding season. Mean abundance and mean intensity of infestation are reported for 97 species captured and inspected during the course of this study. In this region, chigger mite larvae are relatively common on birds and their abundance varies seasonally. High prevalence for some migratory birds suggests that more research and monitoring of ectoparasites are needed, especially in light of emerging diseases.

Friend, foe or food? Recognition and the role of antimicrobial peptides in gut immunity and Drosophila-microbe interactions.

Science.gov (United States)

Broderick, Nichole A

2016-05-26

Drosophila melanogaster lives, breeds and feeds on fermenting fruit, an environment that supports a high density, and often a diversity, of microorganisms. This association with such dense microbe-rich environments has been proposed as a reason that D. melanogaster evolved a diverse and potent antimicrobial peptide (AMP) response to microorganisms, especially to combat potential pathogens that might occupy this niche. Yet, like most animals, D. melanogaster also lives in close association with the beneficial microbes that comprise its microbiota, or microbiome, and recent studies have shown that antimicrobial peptides (AMPs) of the epithelial immune response play an important role in dictating these interactions and controlling the host response to gut microbiota. Moreover, D. melanogaster also eats microbes for food, consuming fermentative microbes of decaying plant material and their by-products as both larvae and adults. The processes of nutrient acquisition and host defence are remarkably similar and use shared functions for microbe detection and response, an observation that has led to the proposal that the digestive and immune systems have a common evolutionary origin. In this manner, D. melanogaster provides a powerful model to understand how, and whether, hosts differentiate between the microbes they encounter across this spectrum of associations.This article is part of the themed issue 'Evolutionary ecology of arthropod antimicrobial peptides'. © 2016 The Author(s).

Friend, foe or food? Recognition and the role of antimicrobial peptides in gut immunity and Drosophila–microbe interactions

Science.gov (United States)

2016-01-01

Drosophila melanogaster lives, breeds and feeds on fermenting fruit, an environment that supports a high density, and often a diversity, of microorganisms. This association with such dense microbe-rich environments has been proposed as a reason that D. melanogaster evolved a diverse and potent antimicrobial peptide (AMP) response to microorganisms, especially to combat potential pathogens that might occupy this niche. Yet, like most animals, D. melanogaster also lives in close association with the beneficial microbes that comprise its microbiota, or microbiome, and recent studies have shown that antimicrobial peptides (AMPs) of the epithelial immune response play an important role in dictating these interactions and controlling the host response to gut microbiota. Moreover, D. melanogaster also eats microbes for food, consuming fermentative microbes of decaying plant material and their by-products as both larvae and adults. The processes of nutrient acquisition and host defence are remarkably similar and use shared functions for microbe detection and response, an observation that has led to the proposal that the digestive and immune systems have a common evolutionary origin. In this manner, D. melanogaster provides a powerful model to understand how, and whether, hosts differentiate between the microbes they encounter across this spectrum of associations. This article is part of the themed issue ‘Evolutionary ecology of arthropod antimicrobial peptides’. PMID:27160597

A new theory of plant-microbe nutrient competition resolves inconsistencies between observations and model predictions.

Science.gov (United States)

Zhu, Qing; Riley, William J; Tang, Jinyun

2017-04-01

Terrestrial plants assimilate anthropogenic CO 2 through photosynthesis and synthesizing new tissues. However, sustaining these processes requires plants to compete with microbes for soil nutrients, which therefore calls for an appropriate understanding and modeling of nutrient competition mechanisms in Earth System Models (ESMs). Here, we survey existing plant-microbe competition theories and their implementations in ESMs. We found no consensus regarding the representation of nutrient competition and that observational and theoretical support for current implementations are weak. To reconcile this situation, we applied the Equilibrium Chemistry Approximation (ECA) theory to plant-microbe nitrogen competition in a detailed grassland 15 N tracer study and found that competition theories in current ESMs fail to capture observed patterns and the ECA prediction simplifies the complex nature of nutrient competition and quantitatively matches the 15 N observations. Since plant carbon dynamics are strongly modulated by soil nutrient acquisition, we conclude that (1) predicted nutrient limitation effects on terrestrial carbon accumulation by existing ESMs may be biased and (2) our ECA-based approach may improve predictions by mechanistically representing plant-microbe nutrient competition. © 2016 by the Ecological Society of America.

Preferences for different nitrogen forms by coexisting plant species and soil microbes.

Science.gov (United States)

Harrison, Kathryn A; Bol, Roland; Bardgett, Richard D

2007-04-01

The growing awareness that plants might use a variety of nitrogen (N) forms, both organic and inorganic, has raised questions about the role of resource partitioning in plant communities. It has been proposed that coexisting plant species might be able to partition a limited N pool, thereby avoiding competition for resources, through the uptake of different chemical forms of N. In this study, we used in situ stable isotope labeling techniques to assess whether coexisting plant species of a temperate grassland (England, UK) display preferences for different chemical forms of N, including inorganic N and a range of amino acids of varying complexity. We also tested whether plants and soil microbes differ in their preference for different N forms, thereby relaxing competition for this limiting resource. We examined preferential uptake of a range of 13C15N-labeled amino acids (glycine, serine, and phenylalanine) and 15N-labeled inorganic N by coexisting grass species and soil microbes in the field. Our data show that while coexisting plant species simultaneously take up a variety of N forms, including inorganic N and amino acids, they all showed a preference for inorganic N over organic N and for simple over the more complex amino acids. Soil microbes outcompeted plants for added N after 50 hours, but in the long-term (33 days) the proportion of added 15N contained in the plant pool increased for all N forms except for phenylalanine, while the proportion in the microbial biomass declined relative to the first harvest. These findings suggest that in the longer-term plants become more effective competitors for added 15N. This might be due to microbial turnover releasing 15N back into the plant-soil system or to the mineralization and subsequent plant uptake of 15N transferred initially to the organic matter pool. We found no evidence that soil microbes preferentially utilize any of the N forms added, despite previous studies showing that microbial preferences for N forms

Detection of Leishmania infantum DNA in hamsters infested with ticks collected from naturally infected dogs

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Valter dos Anjos Almeida

2016-12-01

Full Text Available ABSTRACT. Almeida V. dos A., da Hora T.N., Leça Júnior N.F., Carvalho F.S., da Silva A.L., Wenceslau A.A., Albuquerque G.R. & Silva F.L. Detection of Leishmania infantum DNA in hamsters infested with ticks collected from naturally infected dogs. [Detecção do DNA de Leishmania infantum em hamsters infestados com carrapatos coletados de cães naturalmente infectados.] Revista Brasileira de Medicina Veterinária, 38(4:329-333, 2016. Departamento de Ciências Agrárias e Ambientais, Universidade Estadual de Santa Cruz, Campus Soane Nazaré de Andrade, Hospital Veterinário, Km 16, Rodovia Jorge Amado, Ilhéus, BA 45662-900, Brasil. E-mail: fabiana.lessa@gmail.com The aim of this study was to investigate the role of Rhipicephalus sanguineus, the brown dog tick, in the transmission of Leishmania infantum. To accomplish this, we used 24 adult golden hamsters of both genders, and divided them into two groups: a control group (n = 4 and an experimental group (n = 20. The animals from the experimental group were infested with ticks obtained from dogs naturally infected with L. infantum. Hamsters of the control group were not infested and were maintained at the same conditions, as the infested animals. After three months of observation, animals were euthanized and they were posted to obtain samples of their blood, spleen, liver, lymph nodes, and skin. These samples were then processed by histopathology, immunohistochemistry, and polymerase chain reaction (PCR. Fourteen hamsters (70% of the experimental group tested PCR-positive for L. infantum DNA in samples of buffy coat. The results of this study indicated that R. sanguineus ticks can transmit some forms or parts of L. infantum to parasitized hamsters.

PREVALENCE OF BABESIA SPP., EHRLICHIA SPP., AND TICK INFESTATIONS IN OKLAHOMA BLACK BEARS (URSUS AMERICANUS).

Science.gov (United States)

Skinner, Delaina; Mitcham, Jessica R; Starkey, Lindsay A; Noden, Bruce H; Fairbanks, W Sue; Little, Susan E

2017-10-01

American black bears (Ursus americanus) are commonly infested with ticks throughout their range, but there are few surveys for tick-borne disease agents in bears. To characterize tick infestations and determine the prevalence of current infection with Babesia spp. and past or current infection with Ehrlichia spp. in newly re-established populations of black bears in east central and southeastern Oklahoma, US, we identified adult (n=1,048) and immature (n=107) ticks recovered from bears (n=62). We evaluated serum and whole blood samples from a subset (n=49) for antibodies reactive to, and characteristic DNA fragments of, Ehrlichia spp., as well as characteristic DNA fragments of Babesia spp. Amblyomma americanum, the most common tick identified, was found on a majority (56/62; 90%) of bears and accounted for 697/1,048 (66.5%) of all ticks recovered. Other ticks included Dermacentor variabilis (338/1,048; 32.3%) from 36 bears, Amblyomma maculatum (9/1,048; 0.9%) from three bears, and Ixodes scapularis (4/1,048; 0.4%) from three bears. Antibodies reactive to Ehrlichia spp. were detected in every bear tested (49/49; 100%); maximum inverse titers to Ehrlichia chaffeensis ranged from 64-4,096 (geometric mean titer 1,525). However, PCR failed to identify active infection with E. chaffeensis, Ehrlichia ewingii, or an Ehrlichia ruminantium-like agent. Infection with Babesia spp. was detected by PCR in 3/49 (6%) bears. Together these data confirm that tick infestations and infection with tick-borne disease agents are common in bears in the southern US. The significance of these infestations and infections to the health of bears, if any, and the identity of the Ehrlichia spp. responsible for the antibody reactivity seen, warrant further evaluation.

Population dynamics of soil microbes and diversity of Bacillus ...

African Journals Online (AJOL)

ONOS

2010-01-25

Jan 25, 2010 ... Population dynamics of soil microbes and diversity of ... 25.78, 25.78, 86.26, 24.73, 68.0, 26.8 and 26.8 kDa proteins and equivalent to Cyt, Cry5 and Cry2 toxins ..... Molecular weight (kDa) of protein fractions of the BT isolates.

First record of Megaselia scalaris (Loew) (Diptera: Phoridae) infesting laboratory colonies of Triatoma brasiliensis Neiva (Hemiptera: Reduviidae)

International Nuclear Information System (INIS)

Costa, Jane; Almeida, Carlos E.; Esperanca, Gleidson M.; Morales, Ninive; Mallet, Jacenir R. dos S.; Goncalves, Teresa C.M.; Prado, Angelo P. do

2007-01-01

Megaselia scalaris (Loew) is a cosmopolitan and synanthropic scuttle fly, eclectic in its feeding habits and acts as detritivore, parasite, facultative parasite, and parasitoid. Here we report for the first time M. scalaris infesting laboratory colonies of Triatoma brasiliensis Neiva, the most important Chagas disease vector in semiarid areas of Brazil. M. scalaris larvae were found feeding inside bugs; pupae were found in the esophagus and intestinal regions of T. brasiliensis through dissection. Other relevant information about this finding is also described in this note, including some preventive measures to avoid laboratory colonies infestations. (author)

First record of Megaselia scalaris (Loew) (Diptera: Phoridae) infesting laboratory colonies of Triatoma brasiliensis Neiva (Hemiptera: Reduviidae)

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Costa, Jane; Almeida, Carlos E.; Esperanca, Gleidson M.; Morales, Ninive [Instituto Oswaldo Cruz (FIOCRUZ), Rio de Janeiro, RJ (Brazil). Dept.de Entomologia. Lab. da Colecao Entomologica; Mallet, Jacenir R. dos S.; Goncalves, Teresa C.M. [Instituto Oswaldo Cruz (FIOCRUZ), Rio de Janeiro, RJ (Brazil). Lab. Transmissores de Leishmanioses. Nucleo de Ultraestrutura; Prado, Angelo P. do [Universidade Estadual de Campinas (UNICAMP), Campinas, SP (Brazil). Inst. de Biologia. Dept. de Parasitologia

2007-11-15

Megaselia scalaris (Loew) is a cosmopolitan and synanthropic scuttle fly, eclectic in its feeding habits and acts as detritivore, parasite, facultative parasite, and parasitoid. Here we report for the first time M. scalaris infesting laboratory colonies of Triatoma brasiliensis Neiva, the most important Chagas disease vector in semiarid areas of Brazil. M. scalaris larvae were found feeding inside bugs; pupae were found in the esophagus and intestinal regions of T. brasiliensis through dissection. Other relevant information about this finding is also described in this note, including some preventive measures to avoid laboratory colonies infestations. (author)

Surveys for Stenoma catenifer (Lepidoptera: Elachistidae) and associated parasitoids infesting avocados in Perú.

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Hoddle, Mark S; Hoddle, Christina D

2012-04-01

Surveys for Stenoma catenifer Walsingham, the avocado seed moth, and its associated larval parasitoids were conducted in the Departments of Junín, Huánuco, Cusco, and Madre de Dios in Perú. Fruit infestation levels in some areas ranged from 0 to 58%, and parasitism of S. catenifer larvae in Junín and Huánuco was 23%. Five species of hymenopteran parasitoid in two families, Braconidae (Apanteles sp., Hypomicrogaster sp., and Chelonus sp.) and Ichneumonidae (Pristeromerus sp. and Xiphosomella sp.), were reared from larvae, and one species of tachinid fly (Chrysodoria sp.) emerged from pupae. The dominant larval parasitoid, a gregarious Apanteles sp., accounted for 55% of parasitized hosts. Branch and twig tunneling by S. catenifer larvae in a commercial Hass avocado orchard was observed in Cusco. The field attractiveness of the sex pheromone of S. catenifer was demonstrated with 73% of monitoring traps deployed in three departments (Junín, Huánuco, and Cusco) catching male moths. Approximately 55% of avocado fruit sourced from the Province of Chanchamayo (Junin) and purchased at the Mercado Modelo de Frutas in La Victoria, in central Lima were infested with larvae of S. catenifer. Infested avocado fruit sold at this market could represent a potential incursion threat to coastal Hass avocado production regions in Perú that are reportedly free of this pest.

Morphometric variations of laelapine mite (Acari: Mesostigmata populations infesting small mammals (Mammalia in Brazil

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F. Martins-Hatano

Full Text Available The goal of this study was to evaluate the morphometric variation of laelapine populations (Acari, Mesostigmata associated with neotropical oryzomyine rodents at different geographic localities in Brazil. Three nominal mite species were selected for study, all infesting the pelage of small mammals at different localities in Rio de Janeiro, Espírito Santo, Bahia, and the Federal District, Brazil. To analyse morphometric characteristics, thirty-seven morphological characters distributed across the whole body of each specimen were measured. We use the Analysis of Principal Components, extracting the three first axes and projecting each mite in these axes. Major species level changes in the taxonomy of the host mammals allows an independent examination of morphometric variation of mites infesting a set of distinctly different host species at different geographic localities. Gigantolaelaps vitzthumi and Laelaps differens are associated with oryzomyine rodents of the genus Cerradomys, and consistently showed a tendency to cluster by host phylogeny. Laelaps manguinhosi associated with Nectomys rattus in central Brazil is morphometrically distinct from mites infesting N. squamipes in the coastal restingas of Rio de Janeiro and Espírito Santo. The results obtained here indicate that laelapine mite populations can vary among geographic areas and among phylogenetically related host species. Clearly, the study of these mites at the population level can be an important tool for clarifying the taxonomy of both mites and hosts.

Morphometric variations of laelapine mite (Acari: Mesostigmata) populations infesting small mammals (Mammalia) in Brazil.

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Martins-Hatano, F; Gettinger, D; Manhães, M L; Bergallo, H G

2012-08-01

The goal of this study was to evaluate the morphometric variation of laelapine populations (Acari, Mesostigmata) associated with neotropical oryzomyine rodents at different geographic localities in Brazil. Three nominal mite species were selected for study, all infesting the pelage of small mammals at different localities in Rio de Janeiro, Espírito Santo, Bahia, and the Federal District, Brazil. To analyse morphometric characteristics, thirty-seven morphological characters distributed across the whole body of each specimen were measured. We use the Analysis of Principal Components, extracting the three first axes and projecting each mite in these axes. Major species level changes in the taxonomy of the host mammals allows an independent examination of morphometric variation of mites infesting a set of distinctly different host species at different geographic localities. Gigantolaelaps vitzthumi and Laelaps differens are associated with oryzomyine rodents of the genus Cerradomys, and consistently showed a tendency to cluster by host phylogeny. Laelaps manguinhosi associated with Nectomys rattus in central Brazil is morphometrically distinct from mites infesting N. squamipes in the coastal restingas of Rio de Janeiro and Espírito Santo. The results obtained here indicate that laelapine mite populations can vary among geographic areas and among phylogenetically related host species. Clearly, the study of these mites at the population level can be an important tool for clarifying the taxonomy of both mites and hosts.

Damage of Rhopalosiphum padi (L.) (Hemiptera: Aphididae) on wheat plants related to duration time and density of infestation

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Roza-Gomes, Margarida F.; Salvadori, Jose R.; Schons, Jurema

2008-01-01

Aphids are considered relevant pests on wheat either by direct damage through sap sucking or by indirect damage vectoring BYDV (Barley yellow dwarf virus). Rhopalosiphum padi L. has been observed infesting wheat fields with an increasing frequency. The knowledge and the available technology, besides being more related to other aphids species already recognized as pests, they are insufficient to control the specific c problem of R. padi. Thus, this work evaluated the effects of feeding duration and infestation densities of R. padi on seedlings of wheat cv. EMBRAPA 16. rain yield, yield components and the extent of symptoms were recorded. The experiment was carried out in the fi eld under a completely randomized split-plot experimental design with four replications. The main plot was feeding duration (two and seven days) and the sub-plots were infestation densities (zero, two and 10 aphids per plant). Independent on feeding duration, 10 aphids per plant resulted in significant yield losses, reduction of number of heads and tillers per plant. Canopy dry matter was also reduced. Infestations of two and 10 aphids per plant resulted in continuous yellowing of wheat plants from tillering to the end of flowering stage. When aphids fed for seven days on wheat, more yellowing symptoms were observed at the flower stage in comparison with two days feeding. (author)

Understanding cross-communication between aboveground and belowground tissues via transcriptome analysis of a sucking insect whitefly-infested pepper plants.

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Park, Yong-Soon; Ryu, Choong-Min

2014-01-03

Plants have developed defensive machinery to protect themselves against herbivore and pathogen attacks. We previously reported that aboveground whitefly (Bemisia tabaci Genn.) infestation elicited induced resistance in leaves and roots and influenced the modification of the rhizosphere microflora. In this study, to obtain molecular evidence supporting these plant fitness strategies against whitefly infestation, we performed a 300 K pepper microarray analysis using leaf and root tissues of pepper (Capsicum annuum L.) applied with whitefly, benzo-(1,2,3)-thiadiazole-7-carbothioic acid S-methyl ester (BTH), and the combination of BTH+whitefly. We defined differentially expressed genes (DEGs) as genes exhibiting more than 2-fold change (1.0 based on log2 values) in expression in leaves and roots in response to each treatment compared to the control. We identified a total of 16,188 DEGs in leaves and roots. Of these, 6685, 6752, and 4045 DEGs from leaf tissue and 6768, 7705, and 7667 DEGs from root tissue were identified in the BTH, BTH+whitefly, and whitefly treatment groups, respectively. The total number of DEGs was approximately two-times higher in roots than in whitefly-infested leaves subjected to whitefly infestation. Among DEGs, whitefly feeding induced salicylic acid and jasmonic acid/ethylene-dependent signaling pathways in leaves and roots. Several transporters and auxin-responsive genes were upregulated in roots, which can explain why biomass increase is facilitated. Using transcriptome analysis, our study provides new insights into the molecular basis of whitefly-mediated intercommunication between aboveground and belowground plant tissues and provides molecular evidence that may explain the alteration of rhizosphere microflora and root biomass by whitefly infestation. Copyright © 2013 Elsevier Inc. All rights reserved.

Patterns of infestation by the trombiculid mite Eutrombicula alfreddugesi in four sympatric lizard species (genus Tropidurus) in northeastern Brazil.

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Rocha, C F D; Cunha-Barros, M; Menezes, V A; Fontes, A f; Vrcibradic, D; Van Sluys, M

2008-06-01

We studied the parasitism by the chigger mite Eutrombicula alfreddugesi on four sympatric lizard species of the genus Tropidurus in Morro do Chapéu, Bahia state, Brazil: T. hispidus, T. cocorobensis, T. semitaeniatus and T. erythrocephalus. For each species, we investigated the patterns of infestation and analyzed to which extent they varied among the hosts. We calculated the spatial niche breadth of the chigger mite on the body of each host species and the distribution of mites along the hosts' bodies for each Tropidurus species. All four species of Tropidurus at Morro do Chapéu were parasited by the chigger mite, with high (97-100%) prevalences. Host body size significantly explained the intensity of mite infestation for all species, except T. erythrocephalus. The body regions with highest intensity of infestation in the four lizard species were the mite pockets. The spacial niche width of the chigger varied consistently among the four lizards species studied being highest for T. erytrocephalus and lowest for T. cocorobensis. We conclude that the distribution and intensity with which lizards of the genus Tropidurus are infested by Eutrombicula alfreddugesi larvae results from the interaction between aspects of host morphology (such as body size and the occurrence and distribution of mite pockets) and ecology (especially microhabitat use).

Patterns of infestation by the trombiculid mite Eutrombicula alfreddugesi in four sympatric lizard species (genus Tropidurus in northeastern Brazil

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Rocha C.F.D.

2008-06-01

Full Text Available We studied the parasitism by the chigger mite Eutrombicula alfreddugesi on four sympatric lizard species of the genus Tropidurus in Morro do Chapéu, Bahia state, Brazil: T. hispidus, T. cocorobensis, T. semitaeniatus and T. erythrocephalus. For each species, we investigated the patterns of infestation and analyzed to which extent they varied among the hosts. We calculated the spatial niche breadth of the chigger mite on the body of each host species and the distribution of mites along the hosts’ bodies for each Tropidurus species. All four species of Tropidurus at Morro do Chapéu were parasited by the chigger mite, with high (97-100% prevalences. Host body size significantly explained the intensity of mite infestation for all species, except T. erythrocephalus. The body regions with highest intensity of infestation in the four lizard species were the mite pockets. The spacial niche width of the chigger varied consistently among the four lizards species studied being highest for T. erytrocephalus and lowest for T. cocorobensis. We conclude that the distribution and intensity with which lizards of the genus Tropidurus are infested by Eutrombicula alfreddugesi larvae results from the interaction between aspects of host morphology (such as body size and the occurrence and distribution of mite pockets and ecology (especially microhabitat use.

Plant growth stage-specific injury and economic injury level for verde plant bug, Creontiades signatus (Hemiptera: Miridae), on cotton: effect of bloom period of infestation.

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Brewer, Michael J; Anderson, Darwin J; Armstrong, J Scott

2013-10-01

Verde plant bugs, Creontiades signatus Distant (Hemiptera: Miridae), were released onto caged cotton, Cossypium hirsutum L., for a 1-wk period to characterize the effects of insect density and bloom period of infestation on cotton injury and yield in 2011 and 2012, Corpus Christi, TX. When plants were infested during early bloom (10-11 nodes above first white flower), a linear decline in fruit retention and boll load and a linear increase in boll injury were detected as verde plant bug infestation levels increased from an average of 0.5 to 4 bugs per plant. Lint and seed yield per plant showed a corresponding decline. Fruit retention, boll load, and yield were not affected on plants infested 1 wk later at peak bloom (8-9 nodes above first white flower), even though boll injury increased as infestation levels increased. Second-year testing verified boll injury but not yield loss, when infestations occurred at peak bloom. Incidence of cotton boll rot, known to be associated with verde plant bug feeding, was low to modest (verde plant bug were important contributors to yield decline, damage potential was greatest during the early bloom period of infestation, and a simple linear response best described the yield response-insect density relationship at early bloom. Confirmation that cotton after peak bloom was less prone to verde plant bug injury and an early bloom-specific economic injury level were key findings that can improve integrated pest management decision-making for dryland cotton, at least under low-rainfall growing conditions.

Antibacterial Au nanostructured surfaces

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Wu, Songmei; Zuber, Flavia; Brugger, Juergen; Maniura-Weber, Katharina; Ren, Qun

2016-01-01

We present here a technological platform for engineering Au nanotopographies by templated electrodeposition on antibacterial surfaces. Three different types of nanostructures were fabricated: nanopillars, nanorings and nanonuggets. The nanopillars are the basic structures and are 50 nm in diameter and 100 nm in height. Particular arrangement of the nanopillars in various geometries formed nanorings and nanonuggets. Flat surfaces, rough substrate surfaces, and various nanostructured surfaces were compared for their abilities to attach and kill bacterial cells. Methicillin-resistant Staphylococcus aureus, a Gram-positive bacterial strain responsible for many infections in health care system, was used as the model bacterial strain. It was found that all the Au nanostructures, regardless their shapes, exhibited similar excellent antibacterial properties. A comparison of live cells attached to nanotopographic surfaces showed that the number of live S. aureus cells was flat and rough reference surfaces. Our micro/nanofabrication process is a scalable approach based on cost-efficient self-organization and provides potential for further developing functional surfaces to study the behavior of microbes on nanoscale topographies.We present here a technological platform for engineering Au nanotopographies by templated electrodeposition on antibacterial surfaces. Three different types of nanostructures were fabricated: nanopillars, nanorings and nanonuggets. The nanopillars are the basic structures and are 50 nm in diameter and 100 nm in height. Particular arrangement of the nanopillars in various geometries formed nanorings and nanonuggets. Flat surfaces, rough substrate surfaces, and various nanostructured surfaces were compared for their abilities to attach and kill bacterial cells. Methicillin-resistant Staphylococcus aureus, a Gram-positive bacterial strain responsible for many infections in health care system, was used as the model bacterial strain. It was found that all

Disinfestation of different varieties of potato naturally or artificially infested by the potato tuber moth, Phthorimea Operculella Zell. In the storage

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Haiba, M.I.

1994-01-01

The exposure of potato tuber varieties of Alpha, Spunta, Cara and escort to radiation dose level of 150 Gy could be used to disinfest the potatoes from their natural attacked pest, Phthorimaea Operculella, after the harvest and before storage. Escort variety exhibited somewhat resistance to the natural infestation if compared with the others. The irradiation of the potato tubers did not protect them from the re infestation, during the storage. Also, there were significant changes in some biological properties of the resulted pests, among the four potato varieties, whether the potatoes were non-irradiated or irradiated. The feeding of the artificial infested larvae on the treated tubers gave some malformed adults. 3 tabs

Attraction of Phytoseiulus persimilis (Acari: Phytoseiidae) towards volatiles from various Tetranychus urticae-infested plant species.

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van den Boom, C E M; van Beek, T A; Dicke, M

2002-12-01

Plants infested with the spider mite Tetranychus urticae Koch, may indirectly defend themselves by releasing volatiles that attract the predatory mite Phytoseiulus persimilis Athias-Henriot. Several plants from different plant families that varied in the level of spider mite acceptance were tested in an olfactometer. The predatory mites were significantly attracted to the spider mite-infested leaves of all test plant species. No differences in attractiveness of the infested plant leaves were found for predatory mites reared on spider mites on the different test plants or on lima bean. Thus, experience with the spider mite-induced plant volatiles did not affect the predatory mites. Jasmonic acid was applied to ginkgo leaves to induce a mimic of a spider mite-induced volatile blend, because the spider mites did not survive when incubated on ginkgo. The volatile blend induced in ginkgo by jasmonic acid was slightly attractive to predatory mites. Plants with a high degree of direct defence were thought to invest less in indirect defence than plants with a low degree of direct defence. However, plants that had a strong direct defence such as ginkgo and sweet pepper, did emit induced volatiles that attracted the predatory mite. This indicates that a combination of direct and indirect defence is to some extent compatible in plant species.

A survey of ectoparasite infestations in stray dogs of Gwang-ju City, Republic of Korea.

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Chee, Jeong Hyun; Kwon, Jung Kee; Cho, Ho Seong; Cho, Kyoung Oh; Lee, Yu Jin; Abd El-Aty, A M; Abdel-Aty, A M; Shin, Sung Shik

2008-03-01

This study was designed to investigate the incidence of ectoparasite infestation among stray dogs in Gwang-ju City, Republic of Korea. A total of 103 stray dogs collected in the Animal Shelter of Gwang-ju City from November 2003 to August 2005 were investigated in this study. Ectoparasites of one or more genera were detected in 45.6% (47 / 103) of the dogs examined for dermatologic lesions and/or skin scrapings (from 3-5 affected areas). Otodectes cynotis was found to be the most frequent parasite (22.3%, 23 / 103), followed by Sarcoptes scabiei var canis (19.4%, 20 / 103), Ctenocephalides canis (6.8%, 7 / 103), Demodex canis (4.9%, 5 / 103), and Trichodectes canis (1.0%, 1 / 103). Monospecific infestation was found in 83.0% (39 / 47) of the affected dogs, whereas concurrent infestations with 2 or more ectoparasites per animal were found in 17.0% (8 / 47) of the affected dogs. Trichodectes canis is reported for the first time in the Republic of Korea. Dogs less than 1 yr old were more heavily infected than other age groups (66.7%), and small-sized dogs of less than 3 kg body weight were more heavily infected than larger dogs (41.7%).

Comparative gut physiology symposium: The microbe-gut-brain axis

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The Comparative Gut Physiology Symposium titled “The Microbe-Gut-Brain Axis” was held at the Joint Annual Meeting of the American Society of Animal Science and the American Dairy Science Association on Thursday, July 21, 2016, in Salt Lake City Utah. The goal of the symposium was to present basic r...

Herbivore derived fatty acid-amides elicit reactive oxygen species burst in plants

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The formation of a reactive oxygen species (ROS) burst is a central response of plants to many forms of stress including pathogen attack, several abiotic stresses, damage and insect infestation. These ROS act as a direct defense as well as signaling and regulatory molecules. Perception of microbe or...

Field efficacy of eprinomectin against the sucking louse Haematopinus asini on naturally infested donkeys.

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Veneziano, Vincenzo; Galietti, Alfredo; Mariani, Ugo; Di Loria, Antonio; Piantedosi, Diego; Neola, Benedetto; Guccione, Jacopo; Gokbulut, Cengiz

2013-08-01

A trial was conducted to assess the efficacy of eprinomectin (EPR) against the sucking louse Haematopinus asini on naturally infested donkeys. Parasitological investigations were performed on fifteen animals. On day 0, donkeys received EPR pour-on at the manufacturer's recommended cattle dose. Louse counts were performed on days -1, 7, 14, 21, 28, 35, 42, 49 and 56 at seven predilection sites on the skin of each donkey. EPR was completely effective (100%) from day 7, until the end of the study. Clinically no adverse reactions were observed in any of donkeys treated. EPR was considered to be 100% effective against H. asini. This is the first trial to evaluate the efficacy of EPR against a natural louse infestation in donkeys. Copyright © 2013 Elsevier Ltd. All rights reserved.

Ancient microbes from halite fluid inclusions: optimized surface sterilization and DNA extraction.

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Krithivasan Sankaranarayanan

Full Text Available Fluid inclusions in evaporite minerals (halite, gypsum, etc. potentially preserve genetic records of microbial diversity and changing environmental conditions of Earth's hydrosphere for nearly one billion years. Here we describe a robust protocol for surface sterilization and retrieval of DNA from fluid inclusions in halite that, unlike previously published methods, guarantees removal of potentially contaminating surface-bound DNA. The protocol involves microscopic visualization of cell structures, deliberate surface contamination followed by surface sterilization with acid and bleach washes, and DNA extraction using Amicon centrifugal filters. Methods were verified on halite crystals of four different ages from Saline Valley, California (modern, 36 ka, 64 ka, and 150 ka, with retrieval of algal and archaeal DNA, and characterization of the algal community using ITS1 sequences. The protocol we developed opens up new avenues for study of ancient microbial ecosystems in fluid inclusions, understanding microbial evolution across geological time, and investigating the antiquity of life on earth and other parts of the solar system.

Ancient microbes from halite fluid inclusions: optimized surface sterilization and DNA extraction.

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Sankaranarayanan, Krithivasan; Timofeeff, Michael N; Spathis, Rita; Lowenstein, Tim K; Lum, J Koji

2011-01-01

Fluid inclusions in evaporite minerals (halite, gypsum, etc.) potentially preserve genetic records of microbial diversity and changing environmental conditions of Earth's hydrosphere for nearly one billion years. Here we describe a robust protocol for surface sterilization and retrieval of DNA from fluid inclusions in halite that, unlike previously published methods, guarantees removal of potentially contaminating surface-bound DNA. The protocol involves microscopic visualization of cell structures, deliberate surface contamination followed by surface sterilization with acid and bleach washes, and DNA extraction using Amicon centrifugal filters. Methods were verified on halite crystals of four different ages from Saline Valley, California (modern, 36 ka, 64 ka, and 150 ka), with retrieval of algal and archaeal DNA, and characterization of the algal community using ITS1 sequences. The protocol we developed opens up new avenues for study of ancient microbial ecosystems in fluid inclusions, understanding microbial evolution across geological time, and investigating the antiquity of life on earth and other parts of the solar system.

Environmental characteristics of the cemeteries of Buenos Aires City (Argentina and infestation levels of Aedes aegypti (Diptera: Culicidae

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Vezzani Darío

2001-01-01

Full Text Available Cemeteries with many water-filled containers, flowers, sources of human blood, and shade are favorable urban habitats for the proliferation of Aedes aegypti, a vector of yellow fever and dengue. A total of 22,956 containers was examined in the five cemeteries of the city of Buenos Aires, Argentina. The vector was found in four cemeteries that showed an average infestation level of 5.5% (617 positive out of 11,196 water-filled containers. The four cemeteries positive for Ae. aegypti showed significantly different (p<0.01 infestation levels. Vegetation cover and percentage of infestation were significantly correlated (p<0.01, but neither cemetery area nor number of available containers were significantly related to the proportion of positive vases. Our results suggest that the cemeteries of Buenos Aires represent a gradient of habitat favorableness for this vector species, some of which may act as foci for its proliferation and dispersal.

Mistletoe (Viscum album) infestation in the Scots pine stimulates drought-dependent oxidative damage in summer.

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Mutlu, Salih; Ilhan, Veli; Turkoglu, Halil Ibrahim

2016-04-01

This study sought to contribute to the understanding of the detrimental effect of the mistletoe (Viscum albumL.), a hemiparasitic plant, on the mortality of the Scots pine (Pinus sylvestrisL.). Fieldwork was conducted in the town of Kelkit (Gumushane province, Turkey) from April to October in 2013. Pine needles of similar ages were removed from the branches of mistletoe-infested and noninfested Scots pine plants, then transported to the laboratory and used as research materials. The effects of the mistletoe on the Scots pine during infestation were evaluated by determining the levels of water, electrolyte leakage (EL), malondialdehyde (MDA, being a product of lipid peroxidation) and reactive oxygen species (ROS) such as superoxide anion (O2 (-•)), hydrogen peroxide (H2O2) and hydroxyl radical ((•)OH). In addition, the activities of antioxidative enzymes such as superoxide dismutase (SOD), catalase (CAT) and peroxidase (POX) were measured in the same samples. The highest level of drought stress was found in summer (especially in August) as a result of the lowest water content in the soil and the highest average temperature occurring in these months. The drought stress induced by mistletoe infestation caused a regular decrease in water content, while it increased the levels of EL, MDA and ROS (H2O2, O2 (-•)and(•)OH). The infestation also stimulated the activities of CAT and POX, with the exception of SOD. On the other hand, in August, when the drought conditions were the harshest, the levels of EL and MDA, which are two of the most important indicator parameters for oxidative stress, as well as the levels of H2O2and(•)OH, which are two of the ROS leading to oxidative stress, reached the highest values in both infested and noninfested needles, whereas the O2 (-•)level decreased. For the same period and needles, CAT activity increased, while SOD activity decreased. Peroxidase activity, however, did not exhibit a significant change. Our findings indicate

Progress of CRISPR-Cas based genome editing in Photosynthetic microbes

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Naduthodi, M.I.S.; Barbosa, M.J.; Oost, van der J.

2018-01-01

The carbon footprint caused by unsustainable development and its environmental and economic impact has become a major concern in the past few decades. Photosynthetic microbes such as microalgae and cyanobacteria are capable of accumulating value-added compounds from carbon dioxide, and have been

Reaction of the mussel Mytilus galloprovincialis (Bivalvia) to Eugymnanthea inquilina (Cnidaria) and Urastoma cyprinae (Turbellaria) concurrent infestation.

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Mladineo, Ivona; Petrić, Mirela; Hrabar, Jerko; Bočina, Ivana; Peharda, Melita

2012-05-01

In total 480 individuals of Mytilus galloprovincialis were sampled monthly from October 2009 to September 2010, at the shellfish farm in the Mali Ston Bay, south Adriatic Sea (Croatia) in order to assess the extent of pathology imposed by two parasites, Eugymnanthea inquilina (Cnidaria) and Urastoma cyprinae (Turbellaria). Although a deteriorating impact on host reproduction or condition index was lacking, we evidenced ultrastructural and functional alteration in host cells at the attachment site. Ultrastructural changes included hemocytic encapsulation of the turbellarian and cell desquamation in medusoid infestation. Caspase positive reaction inferred by immunohistochemistry (IHC) was triggered in cases of turbellarian infestation, in contrast with hydroids, suggesting that the former exhibits more complex host-parasite interaction, reflected in the persistent attempts of the parasite to survive bivalve reaction. We have evidenced that both organisms trigger specific host reaction that although not costly in terms of host reproductive cycle or growth, results in mild tissue destruction and hemocyte activation. A lower degree of tissue reaction was observed in cases of hydroid infestation, compared to turbellarian. Copyright © 2012 Elsevier Inc. All rights reserved.

Infestation and distribution of the mite Varroa destructor in colonies of africanized bees

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G. Moretto

Full Text Available Whereas in several parts of the world varroa is the major pest affecting apiculture, in others the parasite is unknown to many beekeepers because its damage to bees is minor. The impact of the mite Varroa destructor is related to the climatic conditions and the races of Apis mellifera bees in each region where the pest exists. In the present study, the current level of infestation by the mite was assessed to determine the evolution of the pest in Africanized bee colonies in Southern Brazil. This level of infestation was considered low: approximately two mites per one hundred adult bees. This result is similar to that obtained for the same apiary almost five years ago and for others distributed in various regions of Brazil. In the present study, we also estimated the total varroa population and its distribution among brood and adults in each bee colony.

Infestation of Broad Bean (Vicia faba) by the Green Stink Bug (Nezara viridula) Decreases Shoot Abscisic Acid Contents under Well-Watered and Drought Conditions.

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Ederli, Luisa; Brunetti, Cecilia; Centritto, Mauro; Colazza, Stefano; Frati, Francesca; Loreto, Francesco; Marino, Giovanni; Salerno, Gianandrea; Pasqualini, Stefania

2017-01-01

The response of broad bean ( Vicia faba ) plants to water stress alone and in combination with green stink bug ( Nezara viridula ) infestation was investigated through measurement of: (1) leaf gas exchange; (2) plant hormone titres of abscisic acid (ABA) and its metabolites, and of salicylic acid (SA); and (3) hydrogen peroxide (H 2 O 2 ) content. Furthermore, we evaluated the effects of experimentally water-stressed broad-bean plants on N. viridula performance in terms of adult host-plant preference, and nymph growth and survival. Water stress significantly reduced both photosynthesis ( A ) and stomatal conductance ( g s ), while infestation by the green stink bug had no effects on photosynthesis but significantly altered partitioning of ABA between roots and shoots. Leaf ABA was decreased and root ABA increased as a result of herbivore attack, under both well-watered and water-deprived conditions. Water stress significantly impacted on SA content in leaves, but not on H 2 O 2 . However, infestation of N. viridula greatly increased both SA and H 2 O 2 contents in leaves and roots, which suggests that endogenous SA and H 2 O 2 have roles in plant responses to herbivore infestation. No significant differences were seen for green stink bug choice between well-watered and water-stressed plants. However, for green stink bug nymphs, plant water stress promoted significantly lower weight increases and significantly higher mortality, which indicates that highly water-stressed host plants are less suitable for N. viridula infestation. In conclusion two important findings emerged: (i) association of water stress with herbivore infestation largely changes plant response in terms of phytohormone contents; but (ii) water stress does not affect the preference of the infesting insects, although their performance was impaired.

Gut microbes may facilitate insect herbivory of chemically defended plants.

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Hammer, Tobin J; Bowers, M Deane

2015-09-01

The majority of insect species consume plants, many of which produce chemical toxins that defend their tissues from attack. How then are herbivorous insects able to develop on a potentially poisonous diet? While numerous studies have focused on the biochemical counter-adaptations to plant toxins rooted in the insect genome, a separate body of research has recently emphasized the role of microbial symbionts, particularly those inhabiting the gut, in plant-insect interactions. Here we outline the "gut microbial facilitation hypothesis," which proposes that variation among herbivores in their ability to consume chemically defended plants can be due, in part, to variation in their associated microbial communities. More specifically, different microbes may be differentially able to detoxify compounds toxic to the insect, or be differentially resistant to the potential antimicrobial effects of some compounds. Studies directly addressing this hypothesis are relatively few, but microbe-plant allelochemical interactions have been frequently documented from non-insect systems-such as soil and the human gut-and thus illustrate their potential importance for insect herbivory. We discuss the implications of this hypothesis for insect diversification and coevolution with plants; for example, evolutionary transitions to host plant groups with novel allelochemicals could be initiated by heritable changes to the insect microbiome. Furthermore, the ecological implications extend beyond the plant and insect herbivore to higher trophic levels. Although the hidden nature of microbes and plant allelochemicals make their interactions difficult to detect, recent molecular and experimental techniques should enable research on this neglected, but likely important, aspect of insect-plant biology.

Heavy Metal Stress, Signaling, and Tolerance Due to Plant-Associated Microbes: An Overview

Science.gov (United States)

Tiwari, Shalini; Lata, Charu

2018-01-01

Several anthropogenic activities including mining, modern agricultural practices, and industrialization have long-term detrimental effect on our environment. All these factors lead to increase in heavy metal concentration in soil, water, and air. Soil contamination with heavy metals cause several environmental problems and imparts toxic effect on plant as well as animals. In response to these adverse conditions, plants evolve complex molecular and physiological mechanisms for better adaptability, tolerance, and survival. Nowadays conventional breeding and transgenic technology are being used for development of metal stress resistant varieties which, however, are time consuming and labor intensive. Interestingly the use of microbes as an alternate technology for improving metal tolerance of plants is gaining momentum recently. The use of these beneficial microorganisms is considered as one of the most promising methods for safe crop-management practices. Interaction of plants with soil microorganisms can play a vital role in acclimatizing plants to metalliferous environments, and can thus be explored to improve microbe-assisted metal tolerance. Plant-associated microbes decrease metal accumulation in plant tissues and also help to reduce metal bioavailability in soil through various mechanisms. Nowadays, a novel phytobacterial strategy, i.e., genetically transformed bacteria has been used to increase remediation of heavy metals and stress tolerance in plants. This review takes into account our current state of knowledge of the harmful effects of heavy metal stress, the signaling responses to metal stress, and the role of plant-associated microbes in metal stress tolerance. The review also highlights the challenges and opportunities in this continued area of research on plant–microbe–metal interaction. PMID:29681916

Gamma irradiation followed by cold storage as a quarantine treatment for Florida grapefruit infested with Caribbean fruit fly

International Nuclear Information System (INIS)

Von Windeguth, D.L.; Gould, W.P.

1990-01-01

'Marsh' white grapefruit, Citrus paradisi (Macf.). infested with eggs and larvae of Caribbean fruit fly, Anastrepha suspensa (Loew) were subjected to ionizing radiation at several low doses followed by cold (1.1°C) storage for 0 to 8 days. Data analyses indicated that an irradiation dose of 50 Gray followed by 5 days of cold storage will give in excess of probit 9 level of quarantine security. A test involving more than 100,000 insects infesting grapefruit confirmed the efficacy of this treatment

Nitrilase enzymes and their role in plant–microbe interactions