WorldWideScience

Sample records for subalpine fir abies

  1. Provenance variability in nursery growth of subalpine fir

    Science.gov (United States)

    Charlie Cartwright; Cheng Ying

    2011-01-01

    Subalpine fir (Abies lasiocarpa [Hook] Nutt.) is a wide-ranging, high-elevation species in the interior of British Columbia. It is commonly harvested for lumber, but replanting of it is limited. Some reticence is based upon wood quality and rate of growth, but there are also seed and nursery culturing difficulties. This study investigated seedling growth traits of 111...

  2. Identifying Subalpine Fir (Abies lasiocarpa Attacked by the Balsam Woolly Adelgid (Adelges piceae Using Spectral Measurements of the Foliage

    Directory of Open Access Journals (Sweden)

    Stephen P. Cook

    2010-01-01

    Full Text Available Balsam woolly adelgid is an invasive pest of firs in the United States. Aerial surveys are conducted for detection of adelgid infestations but other remotely sensed data may also be useful. Our objective was to determine if high spectral resolution, branch-level data can be used to distinguish infested from noninfested trees. Stepwise discriminant analysis yielded a three-variable model (the red-green index and two narrow-bands (one at 670 nm and the other at 1912 nm that classified infested versus non-infested trees with 94% accuracy compared with the 83% accuracy obtained with a single-variable model. The response of trees in narrow spectral bands was integrated across wavebands to simulate measurements from the multispectral SPOT5-HRVIR sensor. Stepwise discriminant analysis again yielded a three-variable model (simple ratio, the SPOT5-HRVIR band in the SWIR region and NDVI with similar accuracy (93% at discriminating infested from non-infested trees compared with the 83% accuracy obtained with a single-variable model.

  3. Survival, frost susceptibility, growth, and disease resistance of corkbark and subalpine fir grown for landscape and Christmas trees

    Science.gov (United States)

    Trees from six corkbark fir (Abies lasiocarpa var. arizonica) and 10 subalpine fir (A. lasiocarpa var. lasiocarpa) seed sources were grown at the University of Idaho Sandpoint Research and Extension Center (SREC) and two commercial nurseries in Idaho and Oregon. Post transplant mortality was highest...

  4. Silvical characteristics of balsam fir (Abies balsamea)

    Science.gov (United States)

    Arthur C. Hart

    1959-01-01

    Balsam fir takes its name from the Latin word for balm. Some people know the tree as the Balm-of-Gilead fir. It has also been called the blister fir, because of the bark blisters that yield Canada balsam, a resin that is used for, among other things, mounting microscope slides. The needles of balsam fir have a spicy aroma that Donald Culross Peattie has called "...

  5. Multi-scale patterns of subalpine fir mortality are driven by complex interactions among broad-scale climate, local topography, stand structure, and tree characteristics

    Science.gov (United States)

    Harvey, B. J.; Andrus, R. A.; Orrego, A.; Battaglia, M.; Negrón, J. F.; Veblen, T. T.

    2016-12-01

    Recent tree mortality events across much of western North America have been associated with warming temperatures and elevated drought stress, which can interact with forest stand-structure and tree vigor to drive outbreaks of native insect species. Although cross-scale interactions among drivers of tree-mortality events have been described for some beetle species (e.g., mountain pine beetle or spruce beetle) and their hosts (lodgepole pine and Engelmann spruce), less is known about how drivers at different scales interact to kill subalpine fir (Abies lasiocarpa) in a phenomenon simply dubbed "subalpine fir mortality" or "subalpine fir decline." Understanding the fate of subalpine fir is important, however, because this is commonly the tree species expected to establish and exhibit growth releases following outbreaks of mountain pine beetle or spruce beetle. In this study, we use three decades of field and remote data that span spatial scales from individual trees to sub-continental ecoregions to explore factors associated with subalpine fir mortality and how drivers interact across scales. Between 1991 and 2015, >5 million hectares (ha) of subalpine forest in the US Rocky Mountains have been affected by subalpine fir mortality. At the eco-region scale (1,000s of km), mortality was temporally associated with increases in regional drought stress, suggesting that climate is an important broad-scale driver. However, at the eco-region, landscape, and stand scales (several km to sub ha), mortality was greatest in cooler/wetter topographic locations and in areas with greater pre-mortality subalpine fir dominance. Conversely, mortality was lowest for fir trees in warmer/drier topographic locations and in areas of lesser pre-mortality subalpine fir dominance. This suggests that topographically driven differences in stand structure drive mortality dynamics at meso-scales and moderate the broad-scale influence of climate. Finally, at the tree and tree-neighborhood scale

  6. Climate Risk Modelling of Balsam Woolly Adelgid Damage Severity in Subalpine Fir Stands of Western North America.

    Science.gov (United States)

    Hrinkevich, Kathryn H; Progar, Robert A; Shaw, David C

    2016-01-01

    The balsam woolly adelgid (Adelges piceae (Ratzeburg) (Homoptera: Adelgidae)) (BWA) is a nonnative, invasive insect that threatens Abies species throughout North America. It is well established in the Pacific Northwest, but continues to move eastward through Idaho and into Montana and potentially threatens subalpine fir to the south in the central and southern Rocky Mountains. We developed a climatic risk model and map that predicts BWA impacts to subalpine fir using a two-step process. Using 30-year monthly climate normals from sites with quantitatively derived BWA damage severity index values, we built a regression model that significantly explained insect damage. The sites were grouped into two distinct damage categories (high damage and mortality versus little or no mortality and low damage) and the model estimates for each group were used to designate distinct value ranges for four climatic risk categories: minimal, low, moderate, and high. We then calculated model estimates for each cell of a 4-kilometer resolution climate raster and mapped the risk categories over the entire range of subalpine fir in the western United States. The spatial variation of risk classes indicates a gradient of climatic susceptibility generally decreasing from the Olympic Peninsula in Washington and the Cascade Range in Oregon and Washington moving eastward, with the exception of some high risk areas in northern Idaho and western Montana. There is also a pattern of decreasing climatic susceptibility from north to south in the Rocky Mountains. Our study provides an initial step for modeling the relationship between climate and BWA damage severity across the range of subalpine fir. We showed that September minimum temperature and a metric calculated as the maximum May temperature divided by total May precipitation were the best climatic predictors of BWA severity. Although winter cold temperatures and summer heat have been shown to influence BWA impacts in other locations, these

  7. Climate Risk Modelling of Balsam Woolly Adelgid Damage Severity in Subalpine Fir Stands of Western North America.

    Directory of Open Access Journals (Sweden)

    Kathryn H Hrinkevich

    Full Text Available The balsam woolly adelgid (Adelges piceae (Ratzeburg (Homoptera: Adelgidae (BWA is a nonnative, invasive insect that threatens Abies species throughout North America. It is well established in the Pacific Northwest, but continues to move eastward through Idaho and into Montana and potentially threatens subalpine fir to the south in the central and southern Rocky Mountains. We developed a climatic risk model and map that predicts BWA impacts to subalpine fir using a two-step process. Using 30-year monthly climate normals from sites with quantitatively derived BWA damage severity index values, we built a regression model that significantly explained insect damage. The sites were grouped into two distinct damage categories (high damage and mortality versus little or no mortality and low damage and the model estimates for each group were used to designate distinct value ranges for four climatic risk categories: minimal, low, moderate, and high. We then calculated model estimates for each cell of a 4-kilometer resolution climate raster and mapped the risk categories over the entire range of subalpine fir in the western United States. The spatial variation of risk classes indicates a gradient of climatic susceptibility generally decreasing from the Olympic Peninsula in Washington and the Cascade Range in Oregon and Washington moving eastward, with the exception of some high risk areas in northern Idaho and western Montana. There is also a pattern of decreasing climatic susceptibility from north to south in the Rocky Mountains. Our study provides an initial step for modeling the relationship between climate and BWA damage severity across the range of subalpine fir. We showed that September minimum temperature and a metric calculated as the maximum May temperature divided by total May precipitation were the best climatic predictors of BWA severity. Although winter cold temperatures and summer heat have been shown to influence BWA impacts in other

  8. Damage by Neonectria neomacrospora and Adelges piceae in provenance trials of subalpine fir (Abies lasiocarpa) in Denmark

    DEFF Research Database (Denmark)

    Skúlason, Brynjar; Hansen, Ole Kim; Thomsen, Iben Margrete

    2017-01-01

    Field trials of Abies lasiocarpa were undertaken with the aim of assessing the potential for Christmas tree production in Denmark. Twenty-six provenances originating from Alaska to New Mexico were tested. Damage by the insect Adelges piceae and the fungus Neonectria neomacrospora was recorded for...

  9. Seasonal fluctuation in concentrations and content of sugar, starch and nutrient in nordmanns fir (Abies nordmannia) Christmas tree

    DEFF Research Database (Denmark)

    Pedersen, Lars Bo; Christensen, Claus Jerram

    Seasonal fluctuation in concentrations and content of sugar, starch and nutrient in nordmanns fir (Abies nordmannia) Christmas tree......Seasonal fluctuation in concentrations and content of sugar, starch and nutrient in nordmanns fir (Abies nordmannia) Christmas tree...

  10. A forest health inventory assessment of red fir (Abies magnifica) in upper montane California

    Science.gov (United States)

    Leif Mortenson; Andrew N. Gray; David C. Shaw

    2015-01-01

    We investigated the forest health of red fir (Abies magnifica) and how it compared with commonly-associated species Jeffrey pine (Pinus jeffreyi), lodgepole pine (Pinus contorta) and white fir (Abies concolor) in the upper montane forests of California. We evaluated tree mortality rates...

  11. Similarity of nutrient uptake and root dimensions of Engelmann spruce and subalpine fir at two contrasting sites in Colorado

    Energy Technology Data Exchange (ETDEWEB)

    Yanai, R; McFarlane, K; Lucash, M; Kulpa, S; Wood, D

    2009-10-09

    Nutrient uptake capacity is an important parameter in modeling nutrient uptake by plants. Researchers commonly assume that uptake capacity measured for a species can be used across sites. We tested this assumption by measuring the nutrient uptake capacity of intact roots of Engelmann spruce (Picea engelmanni Parry) and subalpine fir (Abies lasiocarpa (Hook.) Nutt.) at Loch Vale Watershed and Fraser Experimental Forest in the Rocky Mountains of central Colorado. Roots still attached to the tree were exposed to one of three concentrations of nutrient solutions for time periods ranging from 1 to 96 hours, and solutions were analyzed for ammonium, nitrate, calcium, magnesium, and potassium. Surprisingly, the two species were indistinguishable in nutrient uptake within site for all nutrients (P > 0.25), but uptake rates differed by site. In general, nutrient uptake was higher at Fraser (P = 0.01, 0.15, 0.03, 0.18 for NH{sub 4}{sup +}, NO{sub 3}{sup -}, Ca{sup 2+}, and K{sup +}, respectively), which is west of the Continental Divide and has lower atmospheric deposition of N than Loch Vale. Mean uptake rates by site for ambient solution concentrations were 0.12 {micro}mol NH{sub 4}{sup +} g{sub fwt}{sup -1} h{sup -1}, 0.02 {micro}mol NO{sub 3}{sup -} g{sub fwt}{sup -1}, 0.21 {micro}mol Ca{sup 2+} g{sub fwt}{sup -1} h{sup -1}, and 0.01 {micro}mol Mg{sup 2+} g{sub fwt}{sup -1} h{sup -1} at Loch Vale, and 0.21 {micro}mol NH{sub 4}{sup +} f{sub fwt}{sup -1}h{sup -1}, 0.04 {micro}mol NO{sub 3}{sup -} g{sub fwt}{sup -1} h{sup -1}, 0.51 {micro}mol Ca{sup 2+}g{sub fwt}{sup -1}h{sup -1}, and 0.07 {micro}mol Mg{sup 2+} f{sub fwt}{sup -1}h{sup -1} at Fraser. The importance of site conditions in determining uptake capacity should not be overlooked when parameterizing nutrient uptake models. We also characterized the root morphology of these two species and compared them to other tree species we have measured at various sites in the northeastern USA. Engelman spruce and subalpine fir

  12. Management of silver fir (Abies alba Mill.) in Slovenia

    OpenAIRE

    Bončina, Andrej; Ficko, Andrej; Klopčič, Matija; Matijašič, Dragan; Poljanec, Aleš

    2009-01-01

    In the paper, we analysed the structure and developmental characteristics of forest stands with silver fir in Slovenia, the management and cut in four forest site strata, where silver fir occurs. We used databases from the Slovenia Forest Service. In growing stock (GS) of silver fir, large (dbh=30-49cm) and very large (d=50 cm and more) diameter trees account for 84.9 % at the national level. The highest share of very large diameter silver fir trees (45 %) is in Dinaric silver fir forests and...

  13. Seed Source Significantly Influences Growth Rates and Disease Resistance of Abies Lasiocarpa Grown for Ornamental Nursery Stock and Christmas Trees

    Science.gov (United States)

    Trees from six corkbark fir (Abies lasiocarpa var. arizonica) and 10 subalpine fir (Abies lasiocarpa var. lasiocarpa) seed sources were grown at the University of Idaho (SREC) and three commercial nurseries in northern Idaho and northeastern Oregon. Post transplant mortality was highest during the f...

  14. Airflow patterns in a small subalpine basin

    Science.gov (United States)

    G. Wooldridge; R. Musselman; B. Connell; D. Fox

    1992-01-01

    A study of mean wind speeds and directions has been completed in the Snowy Range of Southern Wyoming, U.S.A. It was conducted in a subalpine ecosystem at an altitude of 3 200 m to 3 400 m above sea level during the summers of 1988 and 1989. Indexes of deformation and axes of asymmetry due to wind shaping of Engelmann spruce (Picea engelmannii) and subalpine fir (Abies...

  15. Genetic variation and population structure in fraser fir (Abies fraseri): a microsatellite assessment of young trees

    Science.gov (United States)

    Kevin M. Potter; John Framton; Sedley A. Josserand; C. Dana Nelson

    2008-01-01

    The island-like populations of Fraser fir (Abies fraseri (Pursh) Poir.) have been isolated since the end of the late-Wisconsinian glaciation on the highest peaks of the Southern Appalachian Mountains and therefore offer an opportunity to investigate the genetic dynamics of a long-fragmented forest tree species. An analysis of eight microsatellite...

  16. Variation in seedling morphology of Turkish fir ( Abies ...

    African Journals Online (AJOL)

    In this study, the genetic variation of some seedling characteristics of Turkish fir was investigated. A total of 303 trees were selected from 17 plots and 10 seedlings from each tree were used. Fifteen morphological characteristics were determined, including root collar diameter, seedling height, total needle, bud length and ...

  17. Influence of ultrasounds on some mechanical properties of fir wood (Abies alba Mill). Microscopic sections

    Science.gov (United States)

    Parpala, V.; Pastirnac, A.; Paraschiv, N.

    1974-01-01

    It was found that as a result of ultrasonic treatment fir wood (Abies alba Mill) shows the effects of homogenization, and the modulus of elasticity for static flexure drops on an average by 50% for 45 min of treatment. The drop is more pronounced for test pieces with 8 to 12 annual rings. Study of microscopic sections disclosed that early wood with one annual ring undergoes the most powerful effect.

  18. Genetic diversity and seed production in Santa Lucia fir (Abies bracteata),a relict of the Miocene broadleaved evergreen forest

    Science.gov (United States)

    F. Thomas Ledig; Paul D. Hodgskiss; David R. Johnson

    2006-01-01

    Santa Lucia fir (Abies bracteata), is a unique fir, the sole member of the subgenus Pseudotorreya. It is a relict of the Miocene broadleaved evergreen sclerophyll forest, and is now restricted to a highly fragmented range in the Santa Lucia Mountains of central coastal California. Expected heterozygosity for 30 isozyme loci in 18 enzyme systems...

  19. Age-class differences in shoot photosynthesis and water relations of Fraser fir (Abies fraseri), southern Appalachian Mountains, USA

    Science.gov (United States)

    Keith Reinhardt; Daniel M. Johnson; William K. Smith

    2009-01-01

    Fraser fir (Abies fraseri (Pursh) Poir.) is an endemic tree species found only in refugial mountain-top forests in the southern Appalachian Mountains, USA. Very few studies have investigated the ecophysiology of this species in its natural environment. We measured and compared photosynthetic gas exchange and water relations of understory germinant...

  20. [Effects of snow pack on soil nitrogen transformation enzyme activities in a subalpine Abies faxioniana forest of western Sichuan, China].

    Science.gov (United States)

    Xiong, Li; Xu, Zhen-Feng; Wu, Fu-Zhong; Yang, Wan-Qin; Yin, Rui; Li, Zhi-Ping; Gou, Xiao-Lin; Tang, Shi-Shan

    2014-05-01

    This study characterized the dynamics of the activities of urease, nitrate reductase and nitrite reductase in both soil organic layer and mineral soil layer under three depths of snow pack (deep snowpack, moderate snowpack and shallow snowpack) over the three critical periods (snow formed period, snow stable period, and snow melt period) in the subalpine Abies faxoniana forest of western Sichuan in the winter of 2012 and 2013. Throughout the winter, soil temperature under deep snowpack increased by 46.2% and 26.2%, respectively in comparison with moderate snowpack and shallow snowpack. In general, the three nitrogen-related soil enzyme activities under shallow snowpack were 0.8 to 3.9 times of those under deep snowpack during the winter. In the beginning and thawing periods of seasonal snow pack, shallow snowpack significantly increased the activities of urease, nitrate and nitrite reductase enzyme in both soil organic layer and mineral soil layer. Although the activities of the studied enzymes in soil organic layer and mineral soil layer were observed to be higher than those under deep- and moderate snowpacks in deep winter, no significant difference was found under the three snow packs. Meanwhile, the effects of snowpack on the activities of the measured enzymes were related with season, soil layer and enzyme type. Significant variations of the activities of nitrogen-related enzymes were found in three critical periods over the winter, and the three measured soil enzymes were significantly higher in organic layer than in mineral layer. In addition, the activities of the three measured soil enzymes were closely related with temperature and moisture in soils. In conclusion, the decrease of snow pack induced by winter warming might increase the activities of soil enzymes related with nitrogen transformation and further stimulate the process of wintertime nitrogen transformation in soils of the subalpine forest.

  1. Estimating under-canopy ablation in a subalpine red-fir forest, southern Sierra Nevada, California

    Science.gov (United States)

    Kirchner, P. B.; Bales, R. C.; Rice, R.; Musselman, K. N.; Molotch, N. P.

    2010-12-01

    Snow ablation in forested environments is a result of the multi-component energy balance between the snow surface, radiation, topography, and vegetation. While these processes have been successfully described and modeled over small to moderate spatial extents the required data are available from few locations and existing models are computationally intensive. The problem of applying these principals to determining snow coverage for large spatial extents and frequent time steps, required by satellite observations, has not been solved. We present a simplified approach for determining a melt-out date based on modeled incident radiation, percent canopy cover, and leaf area index. This method was tested using results from instrumental data, field observations, and readily available spatial data sets by calibrating the MODIS Snow Covered Area and Grain size/albedo (MODSCAG) model from a snow-dominated site in the Wolverton basin Sequoia National Park; part of the Southern Sierra Nevada Critical Zone Observatory. The percent snow cover determined by MODSCAG from peak accumulation and melt out during the 2008 and 2009 water years were compared to ground observations of both forest gaps and under canopies. Ground based measurements indicated that under-canopy melt out of snow-covered area began earlier and ended 1 to 4 weeks after that indicated by satellite observations, which can only view snow in forest gaps. In our study ablation rates, snow cover duration, leaf area index, canopy closure, and Incoming short and long wave radiation were measured on north and southeast facing plots in a subalpine red fir forest. Results from regression analysis yield an R2=0.99 between modeled and measured short wave radiation and an R2=0.82 between leaf area index and the difference between open and under canopy thermal infrared radiation. Canopy cover and leaf area index were also found to be good predictors of observed melt rates and the melt off date of snow under tree canopies. This

  2. Long-term landscape changes in a subalpine spruce-fir forest in central Utah, USA

    Directory of Open Access Journals (Sweden)

    Jesse L. Morris1

    2015-12-01

    Full Text Available Background: In Western North America, increasing wildfire and outbreaks of native bark beetles have been mediated by warming climate conditions. Bioclimatic models forecast the loss of key high elevation species throughout the region. This study uses retrospective vegetation and fire history data to reconstruct the drivers of past disturbance and environmental change. Understanding the relationship among climate, antecedent disturbances, and the legacy effects of settlement-era logging can help identify the patterns and processes that create landscapes susceptible to bark beetle epidemics. Methods: Our analysis uses data from lake sediment cores, stand inventories, and historical records. Sediment cores were dated with radiometric techniques (14C and 210Pb/137Cs and subsampled for pollen and charcoal to maximize the temporal resolution during the historical period (1800 CE to present and to provide environmental baseline data (last 10,500 years. Pollen data for spruce were calibrated to carbon biomass (C t/ha using standard allometric equations and a transfer function. Charcoal samples were analyzed with statistical models to facilitate peak detection and determine fire recurrence intervals. Results: The Wasatch Plateau has been dominated by Engelmann spruce forests for the last ~10,500 years, with subalpine fir becoming more prominent since 6000 years ago. This landscape has experienced a dynamic fire regime, where burning events are more frequent and of higher magnitude during the last 3000 years. Two important disturbances have impacted Engelmann spruce in the historical period: 1 high-grade logging during the late 19th century; and (2 a high severity spruce beetle outbreak in the late 20th century that killed >90 % of mature spruce (>10 cm dbh. Conclusions: Our study shows that spruce-dominated forests in this region are resilient to a range of climate and disturbance regimes. Several lines of evidence suggest that 19th century logging

  3. Epicuticular wax on stomata of damaged silver fir trees (Abies alba Mili.

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    Tomislav Bačić

    2011-01-01

    Full Text Available Condition of epistomatal wax on the abaxial surface of the current and previous-year needles of damaged silver fir trees (Abies alba Mill., both from the polluted Risnjak and "clean" Donja Dobra sites in Gorski Kotar region, both influenced by pollutants coming from Europe, during two years, three times a year, were examined with Scanning Electron Microscope. In the course of time the wax tubules on the epistomatal rims of stomata in polluted, but also in "clean" needles surface, become fused and agglomerated rapidly to various extents of morphologically different types of amorphous wax crusts, primarily compact and particulate ones. This process begins very early, especially in polluted Risnjak site, and may be interpreted as a possible result of air pollution. However, the recrystalization, or production of new tubules, also appears relatively quickly in mostly cases. Quantitative estimations indicate a very large total amount of amorphous wax crusts in the current-year needles, and a very high percentage of the same wax in previous-year needles. Amorphous wax crusts cover stomatal pores, as well as the rims, disturbing the normal gas exchange. Statistically there is a signicant tendency of increase in wax degradation in the needles of the polluted site in comparison with those of the unpolluted one, but there is an insignificant wax degradation among the needles of damaged trees within each site. These results confirmed most of the research done in our preliminary report.

  4. Regulation of Water Use in the Southernmost European Fir (Abies pinsapo Boiss.: Drought Avoidance Matters

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    Raúl Sánchez-Salguero

    2015-06-01

    Full Text Available The current scenario of global warming has resulted in considerable uncertainty regarding the capacity of forest trees to adapt to increasing drought. Detailed ecophysiological knowledge would provide a basis to forecast expected species dynamics in response to climate change. Here, we compare the water balance (stomatal conductance, xylem water potential, needle osmotic adjustment of Abies pinsapo, a relict drought-sensitive Mediterranean fir, along an altitudinal gradient. We related these variables to soil water and nutrient availability, air temperature, atmospheric water potential, and vapour pressure deficit during two consecutive years. Our results indicate that A. pinsapo closed stomata rapidly over a very narrow range of soil water availability and atmospheric dryness. This isohydric response during water stress suggests that this relict conifer relied on the plant hormone abscisic acid to maintain closed stomata during sustained drought, instead of needle desiccation to passively drive stomatal closure, needle osmotic adjustment or a plastic response of the xylem to different levels of water availability. Both the soil and foliar nutrient contents suggest that the studied populations are not limited by nutrient deficiencies, and drought was stronger in the warmer low-elevation areas.

  5. Disturbance and Stand Development of a Colorado Subalpine Forest

    OpenAIRE

    Veblen, Thomas T.; Hadley, Keith S; Reid, Marion S

    1991-01-01

    Stand development patterns were examined in an Engelmann spruce (Picea engelmannii), subalpine fir (Abies lasiocarpa) and lodgepole pine (Pinus contorta var. latifolia) forest in Rocky Mountain National Park in northern Colorado. Two old-growth stands (with fine-scale windthrows dominating dynamics) and a 260-yr-old post-fire stand were sampled for tree ages, sizes, growth, and replacement patterns in windthrow gaps. Visual assessment of frequency of growth releases in increment cores, and de...

  6. Foliar and cortex oleoresin variability of silver fir (Abies alba Mill.) in Albania.

    Science.gov (United States)

    Zeneli, G; Tsitsimpikou, C; Petrakis, P V; Naxakis, G; Habili, D; Roussis, V

    2001-01-01

    Terpene composition of needle and cortical oleoresin from lateral shoots were analyzed by GC/MS for four Silver fir (Abies alba Mill.) populations scattered in natural species range in Albania. More than sixty compounds were detected in the needle oleoresin, which was characterized by a high content of alpha-pinene, camphene, beta-pinene, limonene and bornyl acetate. Three monoterpenes, alpha-pinene, beta-pinene and limonene, and two sesquiterpenes, beta-caryophyllene and germacrene D, comprised the majority of cortical oleoresin. The terpene composition differences among the populations that led to the recognition of two chemotypes. The needle oleoresin from the provinces of Puka, Bulqiza and Llogara were characterised by high amounts of beta-pinene, camphene and alpha-pinene and low amounts of limonene, while that from Drenova had high amounts of beta-pinene and limonene. A similar pattern was found in the cortical oleoresin with the exception of camphene that was a minor contributor. Geographical and seasonal variation between the populations was, also, investigated. Multivariate analysis of both needle and cortical oleoresin separated Drenova (southeastern population) from the other sites. When both major monoterpenes and sesquiterpenes were considered four chemical profiles could be attributed. Based on their chemical profiles, the populations can be divided into two groups: Populations with high content of beta-pinene and alpha-pinene but a low content of limonene (Puka, Bulqiza and Llogara), typical of most of A. alba populations in all its distribution range. Population with a high content of limonene and a moderate content of beta-pinene and alpha-pinene (Drenova).

  7. Gospodarjenje z jelko v Sloveniji: Management of silver fir (Abies alba Mill.) in Slovenia:

    OpenAIRE

    Bončina, Andrej; Ficko, Andrej; Klopčič, Matija; Matijašič, Dragan; Poljanec, Aleš

    2009-01-01

    In the paper, we analysed the structure and developmental characteristics of forest stands with silver fir in Slovenia, the management and cut in four forest site strata, where silver fir occurs. We used databases from the Slovenia Forest Service. In growing stock (GS) of silver fir, large (dbh=30-49cm) and very large (d=50 cm and more) diameter trees account for 84.9 % at the national level. The highest share of very large diameter silver fir trees (45 %) is in Dinaric silver fir forests and...

  8. Variability of silver fir (Abies alba Mill. progeny from the Tisovik Reserve expressed in needle traits and chloroplast microsatellite DNA

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    Pawlaczyk Ewa M.

    2017-01-01

    Full Text Available Progeny from nineteen family lines of silver fir (Abies alba Mill. from the Tisovik Reserve growing in an experimental plot were analyzed based on 4 chloroplast microsatellite DNA loci and 12 morphological and anatomical needle traits. The Tisovik Reserve is located in Białowieża Primeval Forest, 120 km north of the natural range limit of this species, and embraces a small and isolated natural population of silver fir. The aim of this study was to determine genetic variation within and between progeny lines. Analysis of phenotypic variation showed that the traits which differed most among individuals were the needle width and the distance from resin canals to vascular bundle. Those traits, which differed most between the progeny lines, were the number of endodermic cells around the vascular bund and the weight of hypodermic cells. In Tisovik progeny, we detected 107 different haplotypes. In progeny lines, we detected more haplotypes than in maternal trees, and most haplotypes did not exist in maternal trees. This may be the result of pollen influx from other silver fir stands. Progeny from Tisovik showed a higher level of variability in comparison with maternal trees.

  9. Multiresource effects of a stand-replacement prescribed fire in the Pinus contorta-Abies lasiocarpa vegetation zone of central Washington.

    Science.gov (United States)

    Arthur R. Tiedemann; Paul M. Woodard

    2002-01-01

    A stand-replacement prescribed fire in an over-mature lodgepole pine (Pinus contorta Dougl. ex Loud.)-subalpine fir (Abies lasiocarpa (Hook.) Nutt.) stand (snag area) and in a mature lodgepole pine thicket (thicket area) resulted in lower plant diversity within the first year after burning, and as fire energy outputs increased...

  10. Volatile Profile of Croatian Lime Tree (Tilia sp., Fir Honeydew (Abies alba and Sage (Salvia officinalis Honey

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    Olivera Koprivnjak

    2007-01-01

    Full Text Available Volatile profiles of lime tree (Tilia sp., fir honeydew (Abies alba and sage (Salvia officinalis honey produced in Croatia have been studied by using headspace solid phase microextraction (HS-SPME followed by gas chromatography-mass spectrometry (GC-MS analysis. Melissopalynological and sensory characterization have been performed in order to check the reliability of botanical origin of the samples. In case of sage honey, sensory characteristics are reported for the first time and are rather uniform including: colour characterized as beige to jade, depending on the consistency; odour characterized as between light and medium intensity, slightly pungent and wooden; taste characterized as low sweetness, expressive acidity and apple caramel, with persistent fruity aftertaste. Characteristic volatile profiles of the analyzed honeys are described. Taking into consideration similarities with lime and fir honey volatile profiles reported in literature, characteristic volatile compounds resulting from qualitative data evaluation are proposed. Sage honey volatile profile has been reported for the first time and it was found quite different compared to the other studied honeys showing the lowest number of peaks among the studied honeys, 34. Several compounds belonging to the sage honey volatile profile have been identified for the first time in honeys. They include tetrahydro-2,2,5,5-tetramethylfuran, 3-hexenyl ester of butanoic acid, 2-methylbenzene, maltol, methyl ester of 3-furanocarboxylic acid and benzeneacetic acid. Based on the obtained results and with the lack of comparative literature data, they are proposed as characteristic volatiles for the volatile pattern of sage honey.

  11. Increasing Aridity is Enhancing Silver Fir (Abies Alba Mill). Water Stress in its South-Western Distribution Limit

    Energy Technology Data Exchange (ETDEWEB)

    Macias, M. [Department of Geology, University of Helsinki, Gustaf Haellstroeminkatu 2, P.O. Box 64, FI-00014 Helsinki (Finland); Andreu, L.; Bosch, O.; Gutierrez, E. [Departament d' Ecologia, Universitat de Barcelona, Avgda. Diagonal, 645, Barcelona, 08028, Catalonia (Spain); Camarero, J.J. [Unidad de Recursos Forestales, Centro de Investigacion Agroalimentaria, Gobierno de Aragon, Apdo. 727, Zaragoza, 50080, Aragon (Spain)

    2006-12-15

    Tree populations located at the geographical distribution limit of the species may provide valuable information about the response of tree growth to climate warming across climatic gradients. Dendroclimatic information was extracted from a network of 10 silver-fir (Abies alba) populations in the south-western distribution limit of the species (Pyrenees, NE Iberian Peninsula). Ring-width chronologies were built for five stands sampled in mesic sites from the Main Range in the Pyrenees, and for five forests located in the southern Peripheral Ranges where summer drought is more pronounced. The radial growth of silver-fir in this region is constrained by water stress during the summer previous to growth, as suggested by the negative relationship with previous September temperature and, to a lesser degree, by a positive relationship with previous end of summer precipitation. Climatic data showed a warming trend since the 1970s across the Pyrenees, with more severe summer droughts. The recent warming changed the climate-growth relationships, causing higher growth synchrony among sites, and a higher year-to-year growth variation, especially in the southernmost forests. Moving-interval response functions suggested an increasing water-stress effect on radial growth during the last half of the 20th century. The growth period under water stress has extended from summer up to early autumn. Forests located in the southern Peripheral Ranges experienced a more intense water stress, as seen in a shift of their response to precipitation and temperature. The Main-Range sites mainly showed a response to warming. The intensification of water-stress during the late 20th century might affect the future growth performance of the highly-fragmented A. alba populations in the southwestern distribution limit of the species.

  12. EXAMINING OF NATURAL REGENERATION IN A ORIENTAL SPRUCE (Picea orientalis L. Link – FIR (Abies nordmanniana subsp. nordmanniana Spach. MIXED STAND IN ARTVINKAFKASOR FOREST DISTRICT

    Directory of Open Access Journals (Sweden)

    Ali Ömer Üçler

    2001-04-01

    Full Text Available In this study, naturally regenerated succesfull oriental spruce (Picea orientalis (L. Link and fir (Abies nordmanniana Spach. subsp. nordmanniana mixed stand which encompass 5.8 ha area was examined. For that, seedlings in the area were studied for their relationship between growth and age. In addition, the amount of seedlings reached to area after the cuttings with large shelterwood system were determined. The age and height of fir and oriental spruce seedlings in 24 sampling areas each covering 25 square meters are measured according to square method and sampling areas systematically distributed so that samples could represent the regeneration area. Evaluating gathered data, seedlings reached to the area orderly after 1975 preperation cutting. Measurements and counts showed that orieantal spruce hold rich seeds every 4 years, however, this differentiation is not evident for fir. Evaluating height growth depending on age, correlation coefficients are found 0.9993 for oriental spruce and 0.9973 for fir, therefore the seedlings of fir and oriental spruce realized similar growth during their regeneration stage

  13. Climate, geography, and tree establishment in subalpine meadows of the Olympic Mountains, Washington, USA

    Science.gov (United States)

    Woodward, Andrea; Schreiner, Edward G.; Silsbee, D.G.

    1995-01-01

    Noticeable changes in vegetation distribution have occurred in the Pacific Northwest during the last century as trees have established in some subalpine meadows. To study the relationship of this process to climate, recently established trees were aged in six subalpine meadows in the Olympic Mountains, Washington. The sites represent three points along a steep precipitation gradient. Subalpine fir (Abies lasiocarpa) has been establishing at the dry end of the gradient, mountain hemlock (Tsuga mertensiana) at the wet end, and both species in the center. Establishment patterns were compared with deviations from the century-long average for these weather variables: winter precipitation, Palmer Drought Severity Index, and winter, October, and May temperatures. Results show that establishment occurred in dry areas when weather conditions were wetter than average, and in wet areas under drier than average conditions. Establishment at central sites did not show consistent relationships with climate. If future climatic conditions continue to warm, establishment of subalpine fir in subalpine meadows in dry areas may cease and mountain hemlock may resume in wet areas.

  14. Sensitivity of stable isotope ratios of tree-rings of Silver fir (Abies alba Mill.) in Franconia (Central Germany) to climate and environmental changes

    Science.gov (United States)

    Boettger, T.; Haupt, M.; Friedrich, M.

    2012-04-01

    We constructed 1000-year long carbon and oxygen isotope chronologies of Silver fir (Abies alba Mill.) from the temperate region of Franconia (northern Bavaria, Central Germany) with the aim to carry out the climate reconstructions by using of multivariate models. The annual variations of isotope signals in firs were strong influenced by airborne pollutants in the second half of 20th century: the linear responses of 13C; 18O and 2H signals to SO2, O3 and dust concentrations were high significant. Therefore, we used the long meteorological data set, were the disturbed period could be excluded for climate reconstructions. In this case, carbon isotopes correspond most to spring/summer climate conditions as April to August mean temperatures and June/July precipitation amount, oxygen show the strongest correlation to the July relative air humidity and to the April to August mean temperatures. The correlations between tree-ring signals and summer climate are high (p

  15. Mistletoe lectin is not the only cytotoxic component in fermented preparations of Viscum album from white fir (Abies pectinata).

    Science.gov (United States)

    Eggenschwiler, Jenny; von Balthazar, Leopold; Stritt, Bianca; Pruntsch, Doreen; Ramos, Mac; Urech, Konrad; Rist, Lukas; Simões-Wüst, A Paula; Viviani, Angelika

    2007-05-10

    Preparations of mistletoe (Viscum album) are the form of cancer treatment that is most frequently used in the complementary medicine. Previous work has shown that these preparations are able to exert cytotoxic effects on carcinoma cells, the extent of which might be influenced by the host tree species and by the content of mistletoe lectin. Using colorimetric assays, we have now compared the cytotoxic effects of Viscum album preparations (VAPs) obtained from mistletoe growing on oak (Quercus robur and Q. petraea, VAP-Qu), apple tree (Malus domestica,, VAP-M), pine (Pinus sylvestris, VAP-P) or white fir (Abies pectinata, VAP-A), on the in vitro growth of breast and bladder carcinoma cell lines. While MFM-223, KPL-1, MCF-7 and HCC-1937 were the breast carcinoma cell lines chosen, the panel of tested bladder carcinoma cells comprised the T-24, TCC-SUP, UM-UC-3 and J-82 cell lines. Each of the VAPs inhibited cell growth, but the extent of this inhibition differed with the preparation and with the cell line. The concentrations of VAP-Qu, VAP-M and VAP-A which led to a 50 % reduction of cell growth (IC50) varied between 0.6 and 0.03 mg/ml. Higher concentrations of VAP-P were required to obtain a comparable effect. Purified mistletoe lectin I (MLI) led to an inhibition of breast carcinoma cell growth at concentrations lower than those of VAPs, but the sensitivity towards purified MLI did not parallel that towards VAPs. Bladder carcinoma cells were in most cases more sensitive to VAPs treatment than breast carcinoma cells. The total mistletoe lectin content was very high in VAP-Qu (54 ng/mg extract), intermediate in VAP-M (25 ng/mg extract), and very low in VAP-P (1.3 ng/mg extract) and in VAP-A (1 ng/mg extract). As to be expected from the low content of mistletoe lectin, VAP-P led to relatively weak cytotoxic effects. Most remarkably, however, the lectin-poor VAP-A revealed a cytotoxic effect comparable to, or even stronger than, that of the lectin-rich VAP-Qu, on all

  16. Mistletoe lectin is not the only cytotoxic component in fermented preparations of Viscum album from white fir (Abies pectinata

    Directory of Open Access Journals (Sweden)

    Ramos Mac

    2007-05-01

    Full Text Available Abstract Background Preparations of mistletoe (Viscum album are the form of cancer treatment that is most frequently used in the complementary medicine. Previous work has shown that these preparations are able to exert cytotoxic effects on carcinoma cells, the extent of which might be influenced by the host tree species and by the content of mistletoe lectin. Methods Using colorimetric assays, we have now compared the cytotoxic effects of Viscum album preparations (VAPs obtained from mistletoe growing on oak (Quercus robur and Q. petraea, VAP-Qu, apple tree (Malus domestica,, VAP-M, pine (Pinus sylvestris, VAP-P or white fir (Abies pectinata, VAP-A, on the in vitro growth of breast and bladder carcinoma cell lines. While MFM-223, KPL-1, MCF-7 and HCC-1937 were the breast carcinoma cell lines chosen, the panel of tested bladder carcinoma cells comprised the T-24, TCC-SUP, UM-UC-3 and J-82 cell lines. Results Each of the VAPs inhibited cell growth, but the extent of this inhibition differed with the preparation and with the cell line. The concentrations of VAP-Qu, VAP-M and VAP-A which led to a 50 % reduction of cell growth (IC50 varied between 0.6 and 0.03 mg/ml. Higher concentrations of VAP-P were required to obtain a comparable effect. Purified mistletoe lectin I (MLI led to an inhibition of breast carcinoma cell growth at concentrations lower than those of VAPs, but the sensitivity towards purified MLI did not parallel that towards VAPs. Bladder carcinoma cells were in most cases more sensitive to VAPs treatment than breast carcinoma cells. The total mistletoe lectin content was very high in VAP-Qu (54 ng/mg extract, intermediate in VAP-M (25 ng/mg extract, and very low in VAP-P (1.3 ng/mg extract and in VAP-A (1 ng/mg extract. As to be expected from the low content of mistletoe lectin, VAP-P led to relatively weak cytotoxic effects. Most remarkably, however, the lectin-poor VAP-A revealed a cytotoxic effect comparable to, or even stronger

  17. Metabolite changes in conifer buds and needles during forced bud break in Norway spruce (Picea abies and European silver fir (Abies alba

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    Priyanka eDhuli

    2014-12-01

    Full Text Available Environmental changes such as early spring and warm spells induce bud burst and photosynthetic processes in cold-acclimated coniferous trees and consequently, cellular metabolism in overwintering needles and buds. The purpose of the study was to examine metabolism in conifers under forced deacclimation (artificially induced spring by exposing shoots of Picea abies (boreal species and Abies alba (temperate species to a greenhouse environment (22°C, 16/8 h D/N cycle over a nine week period. Each week, we scored bud opening and collected samples for GC/MS–based metabolite profiling. We detected a total of 169 assigned metabolites and 80 identified metabolites, comprising compounds such as mono- and disaccharides, Krebs cycle acids, amino acids, polyols, phenolics and phosphorylated structures. Untargeted multivariate statistical analysis based on PCA and cluster analysis segregated samples by species, tissue type, and stage of tissue deacclimations. Similar patterns of metabolic regulation in both species were observed in buds (amino acids, Krebs cycle acids and needles (hexoses, pentoses, and Krebs cycle acids. Based on correlation of bud opening score with compound levels, distinct metabolites could be associated with bud and shoot development, including amino acids, sugars and acids with known osmolyte function, and secondary metabolites. This study has shed light on how elevated temperature affects metabolism in buds and needles of conifer species during the deacclimation phase, and contributes to the discussion about how phenological characters in conifers may respond to future global warming.

  18. Population differentiation in tree-ring growth response of white fir (Abies concolor) to climate: Implications for predicting forest responses to climate change

    Energy Technology Data Exchange (ETDEWEB)

    Jensen, Deborah Bowne [Univ. of California, Berkeley, CA (United States)

    1993-01-01

    Forest succession models and correlative models have predicted 200--650 kilometer shifts in the geographic range of temperate forests and forest species as one response to global climate change. Few studies have investigated whether population differences may effect the response of forest species to climate change. This study examines differences in tree-ring growth, and in the phenotypic plasticity of tree-ring growth in 16-year old white fir, Abies concolor, from ten populations grown in four common gardens in the Sierra Nevada of California. For each population, tree-ring growth was modelled as a function of precipitation and degree-day sums. Tree-ring growth under three scenarios of doubled CO2 climates was estimated.

  19. Comparisons of photosynthesis-related traits of 27 abundant or subordinate bryophyte species in a subalpine old-growth fir forest.

    Science.gov (United States)

    Wang, Zhe; Bader, Maaike Y; Liu, Xin; Zhu, Zhangming; Bao, Weikai

    2017-09-01

    Bryophyte communities can exhibit similar structural and taxonomic diversity as vascular plant communities, just at a smaller scale. Whether the physiological diversity can be similarly diverse, and whether it can explain local abundance patterns is unknown, due to a lack of community-wide studies of physiological traits. This study re-analyzed data on photosynthesis-related traits (including the nitrogen, phosphorus and chlorophyll concentrations, photosynthetic capacities, and photosynthetic nutrient use efficiencies) of 27 bryophyte species in a subalpine old-growth fir forest on the eastern Tibetan Plateau. We explored differences between taxonomic groups and hypothesized that the most abundant bryophyte species had physiological advantages relative to other subdominant species. Principal component analysis (PCA) was used to summarize the differences among species and trait values of the most abundant and other co-occurring subdominant species. Species from the Polytrichaceae were separated out on both PCA axes, indicating their high chlorophyll concentrations and photosynthetic capacities (axis 1) and relatively high-light requirements (axis 2). Mniaceae species also had relatively high photosynthetic capacities, but their light saturation points were low. In contrast, Racomitrium joseph-hookeri and Lepidozia reptans , two species with a high shoot mass per area, had high-light requirements and low nutrient and chlorophyll concentrations and photosynthetic capacities. The nutrient concentrations, photosynthetic capacities, and photosynthetic nutrient use efficiencies of the most abundant bryophyte species did not differ from co-occurring subdominant species. Our research confirms the links between the photosynthesis-related traits and adaptation strategies of bryophytes. However, species relative abundance was not related to these traits.

  20. Rooting cuttings from douglas-fir, white-fir, and California red fir christmas trees

    Science.gov (United States)

    C. M. Blankensop; R. Z. Callaham

    1960-01-01

    Christmas tree growers in California have asked geneticists to help improve the characteristics of the - wild species they are cultivating. The preferred Christmas trees of California are Shasta red fir (Abies magnifica A. Murr.), white fir (A. concolor (Gord. & Glend.) Lindl.), and Douglas-fir (Pseudotsuga...

  1. Delphinella Shoot Blight on Abies lasiocarpa Provenances in Norway

    Directory of Open Access Journals (Sweden)

    Venche Talgø

    2015-12-01

    Full Text Available Delphinella shoot blight (Delphinella abietis attacks true firs (Abies spp. in Europe and North America. Especially subalpine fir (A. lasiocarpa, one of the main Christmas tree species in Norway, is prone to the disease. The fungus kills current year needles, and in severe cases entire shoots. Dead needles become covered with black fruiting bodies, both pycnidia and pseudothecia. Delphinella shoot blight has mainly been a problem in humid, coastal regions in the northwestern part of Southern Norway, but, probably due to higher precipitation in inland regions during recent years, heavy attacks were found in 2011 in a field trial with 76 provenances of subalpine fir in Southeastern Norway. However, the amount of precipitation seemed less important once the disease had established in the field. Significant differences in susceptibility between provenances were observed. In general, the more bluish the foliage was, the healthier the trees appeared. The analysis of provenance means indicated that, at least for the southern range, the disease ratings were correlated with foliage color. This study also includes isolation, identification, a pathogenicity test, a seed test and electron microscopy of the wax layer on the needles. The fungus was identified based on the morphology of spores and by sequencing the Internal Transcribed Spacer (ITS regions of the ribosomal DNA. Koch’s postulates were fulfilled. The fungus was found present on newly harvested seeds and may therefore spread via international seed trade. When comparing the wax layers on green and blue needles, those of the latter were significantly thicker, a factor that may be involved in disease resistance.

  2. A Bayesian Analysis Shows That a Spruce Beetle Outbreak Reduces Snow Interception and Sublimation in a Subalpine Spruce-Fir Forest

    Science.gov (United States)

    Frank, J. M.; Massman, W. J.; Ewers, B. E.; Williams, D. G.

    2016-12-01

    Sublimation is a key component in the water cycle of cold, snow dominated ecosystems. In many high elevation spruce-fir forests of western North America, recent spruce beetle outbreaks have caused widespread tree mortality, opened the canopy, and potentially altered the processes that control sublimation. This study evaluates three hypotheses: in these ecosystems the dominant source for sublimation originates from canopy intercepted snow, the loss of canopy following a beetle disturbance leads to significantly less sublimation, and major sublimation events are driven by the flow of sensible heat into the canopy. Bayesian analysis is used to evaluate a two source energy and canopy mass model that explains seventeen years (2000-2016) of winter eddy-covariance flux data at the GLEES AmeriFlux sites where a spruce beetle outbreak caused 75-85% basal area mortality. The model estimated that the resistance to snow sublimation from the canopy was an order of magnitude less than from the snowpack and that the maximum snow loading in the canopy was reduced to 25-56% of its pre-outbreak capacity. Comparing model results obtained using the observed decrease in leaf area index versus a "no beetle" condition, there has been a significant decrease in ecosystem sublimation since 2011. In the past few years, a 5-11% increase in snowpack sublimation has been offset by 28-32% less sublimation from canopy intercepted snow, with the net being 17-25% less total sublimation. This is equivalent to 3-6% of the total precipitation. Informing the model with information other than the above-canopy fluxes indicates that a near snowpack eddy covariance system decreases the canopy contribution to sublimation, including observed sensible heat fluxes requires a correction to resolve the surface energy imbalance, and stable isotopes of water vapor extend sublimation events. Because tree growth and ecological succession are slow in spruce-fir forests, these results could persist for decades.

  3. Changes in the relationships between climate and silver fir (Abies alba Mill.) growth during the 20th century in the Tuscan Apennine Alps (Middle Italy)

    Science.gov (United States)

    D'Aprile, F.; Tapper, N.; Baker, P.; Bartolozzi, L.; Bottacci, A.

    2012-04-01

    In the Tuscan Apennine Alps, recent research has shown that similarity in trends of monthly climate variables (i.e., temperature and rainfall) is non-stationary amongst sites during the 20th century even between sites that differ little in elevation and at a relatively short distance from each other (D'Aprile et al., 2010; D'Aprile et al., 2011). Moreover, the level of correlation between series of monthly climate variables varies irregularly from highly positive to negative over time. We hypothesised that those changing climate conditions, even at the local level, could cause different tree-ring growth responses in silver fir amongst sites. The hypothesis was tested by dendroclimatological analysis, which was applied to study stands in silver fir forests close to the meteorological stations where climate analysis has been made. Results show that the influences of both monthly mean temperature and monthly rainfall on silver fir growth vary greatly during the 20th century in the Tuscan Apennine Alps, and the ways that they change differ with month and amongst sites. Within sites, differences in the relationships between climate variables and silver fir tree-ring growth appear small in spite of different elevation of the study stands. These results contribute a changing point in forest planning and management especially in consideration of the need to adapt forest management and interventions to changing climate conditions and mitigate the impacts on silver fir forests. Moreover, they introduce climate variability as a key parameter in sustainable forest management for biodiversity conservation, socially responsible uses, nature conservation, and survival of the only conifer tree species typical of mountain mixed forest ecosystems in the Apennine Alps.

  4. Hydrological Features on Subalpine Forest Zone in the East of Qinghai-Tibet Plateau

    Science.gov (United States)

    Zhong, X.; Cheng, G.; Guo, W.

    2008-12-01

    The Hengduan mountain chains of China is situated on the east of Qinghai-Tibet Plateau with area of more than 400,000 km2. Mountains and rivers run through in north-south direction, and are collocated side by side on east-west. Elevation difference between ridges and valleys has great disparity, normally of 1000-2500m, so the vertical zones of vegetation are very distinct. Subalpine coniferous forest zone, mainly composed of fir (Abies) and spruce (Picea), is on altitude of 2800-4200m, which is a chief component of the forested area in southwest China, and an important region for water conservation of several international rivers inlcuding Nujiang River and Lancangjiang River, as well as the world-famous Changjiang River. Thus, it has both theoretical and practical significance to study hydrological process and laws of forest in this region. The study area is located at the Gongga Mountain, on the east edge of the Hengduan mountain chains. Elevation of the main peak is 7556m, and elevation difference between ridge and valley on the eastern slope is 6400m. An ecological observation station was built at altitude of 3000m on the eastern slope of Gongga Mountain in 1988, mainly for alpine ecology and forest hydrology research. Based on the analysis of 20- years observation data from this station, it is revealed that hydrological process of forest in this area has several features as follows: (1) Canopy interception of primitive fir (Abies) forest is obviously greater than other tree species, and interception rate is 30-40%. Maximal canopy interception of one-time precipitation of primitive fir forest is commonly 2-5mm. According to observation data of canopy interception, a conceptual model of canopy interception of fir forest is established: R=1.69[(1-exp(-0.41P))+0.19P (P is precipitation in mm); (2) Natural valid moisture holding capacity in layer of moss-decayed wood and leaves beneath trees is up to 5.6mm. Porosity in soil surface layer and non-capillary porosity

  5. Development of spruce-fir stands following spruce beetle outbreaks

    Science.gov (United States)

    J. M. Schmid; T. E. Hinds

    1974-01-01

    Logged and unlogged stands of Engelmann spruce-subalpine fir were evaluated in spruce beetle outbreak areas infested about 15, 25, 50, and 100 years ago. Seedling regeneration was generally adequate except in heavily logged areas, although seedlings were often damaged, apparently by animals. Species composition was dramatically altered in favor of fir in the unlogged...

  6. Somatic Embryogenesis of Abies cephalonica Loud.

    Science.gov (United States)

    Krajňáková, Jana; Häggman, Hely

    2016-01-01

    Greek fir (Abies cephalonica Loudon) belongs to the Mediterranean fir species and is widely distributed in the mountains of Central and Southern Greece. Considering a climatic scenario, infestation by pathogens or insects and fire episodes, it has been proposed that Mediterranean firs could be in danger in some parts of their present range but, on the other hand, could also replace other species in more northern zones with temperate humid climates (e.g., silver fir, Abies alba Mill.). As fir species are generally highly productive and therefore important for commercial forestry, they have traditionally been involved in conventional tree improvement programs. A lot of effort has been put into the development of vegetative propagation methods for firs, in order to rapidly gain the benefits of traditional breeding to be utilized in reforestation. The present paper provides up to date information on protocols for somatic embryogenesis (i.e., the most promising in vitro method for vegetative propagation) of Greek fir. Moreover, the protocols for cryopreservation and long-term storage of embryogenic material are described as well.

  7. Evolutionary history and population genetics of fraser fir and intermediate fir, southern Appalachian endemic conifers imperiled by an exotic pest and climate change

    Science.gov (United States)

    Kevin M. Potter; John Frampton; Sedley Josserand; C. Dana. Nelson

    2010-01-01

    Two Abies (true fir) taxa are endemic to high elevations of the Appalachian Mountains, where both are restricted to small populations and are imperiled by the same exotic insect. Fraser fir (Abies fraseri) exists in a handful of island-like populations on mountain ridges in the southern Appalachians of North Carolina, Tennessee and...

  8. Stability of nuclear DNA content among divergent and isolated populations of Fraser fir

    Science.gov (United States)

    L.D. Auckland; J.S. Johnston; H.J. Price; F.E. Bridgwater

    2001-01-01

    Fraser fir (Abies fraseri (Pursh) Poir.) is an endemic species consisting of six major disjunct populations in the Appalachian Mountains, U.S.A. Nuclear DNA content was measured with laser flow cytometry to determine if genome size differences could be detected among the disjunct populations of Fraser fir and its close relatives, balsam fir

  9. A model to estimate noble fir bough weight.

    Science.gov (United States)

    Keith A. Blatner; Roger D. Fight; Nan Vance; Mark Savage; Roger. Chapman

    2005-01-01

    The harvesting of noble fir (Abies procera) for the production of Christmas wreaths and related products has been a mainstay of the nontimber forest products industry in the Pacific Northwest (PNW) for decades. Although noble fir is the single most important bough product harvested in the PNW, little or no work has been published concerning the...

  10. Growth of White fir after Douglas-fir tussock moth outbreaks: long-term records in the Sierra Nevada.

    Science.gov (United States)

    Boyd E. Wickman

    1986-01-01

    Radial growth of white fir trees, Abies concolor (Gord. and Glend.) Lindl. ex Hildebr., defoliated almost 30 years ago by Douglas-fir tussock moth, Orgyia pseudotsugata (McDunnough), in the central Sierra Nevada was compared with 22 years of growth prior to the outbreak. There was little difference in growth between the two...

  11. Symptoms associated with inoculation of stems on living Douglas-fir and Grand Fir Trees with Phytophthora ramorum

    Science.gov (United States)

    Gary Chastagner; Kathy Riley; Katie Coats; Marianne Elliott; Annie DeBauw; Norm Dart

    2010-01-01

    To obtain a better understanding of the potential risk of infection and colonization of living Douglas-fir (Pseudotsuga menziesii) and grand fir (Abies grandis) stems, the stems on over 150 trees of each species were inoculated at a Christmas tree farm near Los Gatos, California. This study had the following objectives: 1)...

  12. Abies religiosa habitat prediction in climatic change scenarios and implications for monarch butterfly conservation in Mexico

    Science.gov (United States)

    Cuauhtemoc Saenz-Romero; Gerald E. Rehfeldt; Pierre Duval; Roberto A. Lindig-Cisneros

    2012-01-01

    Abies religiosa (HBK) Schl. & Cham. (oyamel fir) is distributed in conifer-dominated mountain forests at high altitudes along the Trans-Mexican Volcanic Belt. This fir is the preferred host for overwintering monarch butterfly (Danaus plexippus) migratory populations which habitually congregate within a few stands now located inside a Monarch Butterfly Biosphere...

  13. Secondary resin production increases with vigor of Abies grandis inoculated with Trichosporium symbioticum in northeastern Oregon.

    Science.gov (United States)

    Gregory M. Filip; Erik Christiansen; Catherine A. Parks

    1989-01-01

    Thirty grand fir (Abies grandis (Dougl. ex D. Don) Lindl.) trees were artificially inoculated with the fungal symbiont, Trichosporium symbioticum Wright, to simulate attack by the fir engraver beetle, Scolytus ventralis LeConte. Fifteen months after treatment, secondary resin production, necrotic lesion...

  14. A small animal model study of perlite and fir bark dust on guinea pig lungs.

    Science.gov (United States)

    McMichael, R F; DiPalma, J R; Blumenstein, R; Amenta, P S; Freedman, A P; Barbieri, E J

    1983-05-01

    Fir bark (Abies) and perlite (noncrystalline silicate) dusts have been reported to cause pulmonary disease in humans. Guinea pigs were exposed to either fir bark or perlite dust in a special chamber. Severe pathologic changes occurred in the lungs, consisting of lymphoid aggregated and a perivascular inflammatory response. Both dusts caused similar changes although one was vegetable (fir bark) and the other mineral (perlite). Fir bark and perlite dust appeared to be more than just nuisance dusts.

  15. Phenology of plants in relation to ambient environment in a subalpine forest of Uttarakhand, western Himalaya.

    Science.gov (United States)

    Bisht, Vinod K; Kuniyal, Chandra P; Bhandari, Arvind K; Nautiyal, Bhagwati P; Prasad, P

    2014-07-01

    Observations on phenology of some representative trees, shrubs, under-shrubs and herbs in a subalpine forest of Uttarakhand, western Himalaya were recorded. With the commencement of favorable growth season in April, occurrence of leaf fall was indicatory growth phenomenon in Quercus semecarpifolia, Q. floribunda and Abies spectabilis. However, active vegetative growth in herbaceous species starts onward April and fruit maturation and seed dehiscence are completed from mid of September to October. In general, vegetative growth and reproductive stages in majority of the studied species seems to be dependent on adequate moisture content and also flowering and fruiting in subalpine plants correlate ambient temperature.

  16. [Contribution of soil fauna to the mass loss of Betula albosinensis leaf litter at early decomposition stage of subalpine forest litter in western Sichuan].

    Science.gov (United States)

    Xia, Lei; Wu, Fu-Zhong; Yang, Wan-Qin; Tan, Bo

    2012-02-01

    In order to quantify the contribution of soil fauna to the decomposition of birch (Betula albosinensis) leaf litter in subalpine forests in western Sichuan of Southwest China during freeze-thaw season, a field experiment with different mesh sizes (0.02, 0.125, 1 and 3 mm) of litterbags was conducted in a representative birch-fir (Abies faxoniana) forest to investigate the mass loss rate of the birch leaf litter from 26 October, 2010 to 18 April, 2011, and the contributions of micro-, meso- and macro-fauna to the decomposition of the leaf litter. Over the freeze-thaw season, 11.8%, 13.2%, 15.4% and 19.5% of the mass loss were detected in the litterbags with 0.02, 0. 125, 1 and 3 mm mesh sizes, respectively. The total contribution of soil fauna to the litter decomposition accounted for 39.5% of the mass loss, and the taxa and individual relative density of the soil fauna in the litterbags had the similar variation trend with that of the mass loss rate. The contribution rate of soil fauna to the leaf litter mass loss showed the order of micro- fauna, with the highest contribution of micro-fauna (7.9%), meso-fauna (11.9%), and macro-fauna (22.7%) at the onset of freezing stage, deeply frozen stage, and thawing stage, respectively. The results demonstrated that soil fauna played an important role in the litter decomposition in subalpine forests of western Sichuan during freeze-thaw season.

  17. Mean wind patterns and snow depths in an alpine-subalpine ecosystem as measured by damage to coniferous trees

    Science.gov (United States)

    G. L. Wooldridge; R. C. Musselman; R. A. Sommerfeld; D. G. Fox; B. H. Connell

    1996-01-01

    1. Deformations of Engelmann spruce and subalpine fir trees were surveyed for the purpose of determining climatic wind speeds and directions and snow depths in the Glacier Lakes Ecosystem Experiments Site (GLEES) in the Snowy Range of southeastern Wyoming, USA. Tree deformations were recorded at 50- and 100-m grid intervals over areas of c. 30 ha and 300 ha,...

  18. Reduced climate sensitivity of carbon, oxygen and hydrogen stable isotope ratios in tree-ring cellulose of silver fir (Abies alba Mill.) influenced by background SO2 in Franconia (Germany, Central Europe).

    Science.gov (United States)

    Boettger, Tatjana; Haupt, Marika; Friedrich, Michael; Waterhouse, John S

    2014-02-01

    The climate sensitivity of carbon (δ(13)C), oxygen (δ(18)O) and hydrogen (δ(2)H) isotope signatures in tree-ring cellulose of Abies alba Mill. from a marginally industrialized area of Franconia (Germany) was analysed for the last 130 years. All isotopes preserve climatic signals up to c. 1950 AD. After 1950 we observe a clear reduction in climate sensitivity of δ(13)C and δ(2)H while δ(18)O - climate relations remain well pronounced. Nevertheless statistical tests implied that SO2 background emissions of West Germany had influenced isotope signatures long before 1950. The relationships between isotope values and concentrations of SO2, dust, O3 and NO2 at the regional level during the period 1979-2006 indicate that δ(13)C and δ(18)O were influenced primarily by SO2. The impact of SO2 on δ(2)H was negligible, but the observed reduction of climate sensitivity may be caused by synergic influences. The results have significant implications if isotope signatures from tree-rings from anthropogenic influenced regions are used to reconstruct past climate. Copyright © 2013 Elsevier Ltd. All rights reserved.

  19. Mammoth lakes revisited—50 years after a Douglas-fir tussock moth outbreak.

    Science.gov (United States)

    Boyd E. Wickman; G. Lynn Starr

    1990-01-01

    For five decades after an outbreak of Douglas-fir tussock moth (Orgyia pseudotsugata (McDunnough)), radial growth of defoliated white fir trees (Abies concolor (Gord. & Glend.) Lindl.), was significantly greater than that of nondefoliated host trees nearby. The increased growth probably was due to the thinning effect of...

  20. Population dynamics of dwarf mistletoe on young true firs in the central Sierra Nevada, California

    Science.gov (United States)

    Robert E Scharpf; J. R. Jr. Parmeter

    1982-01-01

    Young red firs (Abies magnifica A. Murr.) and white firs (A. concolor [Gord. & Glend.] Lindl. ex Hildebr.) on the Stanislaus National Forest, California, were inoculated with seeds of dwarf mistletoe (Arceuthobium abietinum) for 5 successive years. Only 3 to 4 percent of about 7000 seeds placed on branches...

  1. Dwarf Mistletoe on Red Fir . . . infection and control in understory stands

    Science.gov (United States)

    Robert F. Scharpf

    1969-01-01

    Height and age of understory red fir (Abies magnifica A. Murr.) were related to dwarf mistletoe (Arceuthobiilm campylopodum f. abietinum) infection from the surrounding overstory red fir on four National Forests in California. Percentage of trees infected and intensity of infection increased significantly as height of understory...

  2. Phenology of plants in relation to ambient environment in a subalpine forest of Uttarakhand, western Himalaya

    OpenAIRE

    Bisht, Vinod K.; Kuniyal, Chandra P.; Bhandari, Arvind K.; Nautiyal, Bhagwati P.; Prasad, P.

    2014-01-01

    Observations on phenology of some representative trees, shrubs, under-shrubs and herbs in a subalpine forest of Uttarakhand, western Himalaya were recorded. With the commencement of favorable growth season in April, occurrence of leaf fall was indicatory growth phenomenon in Quercus semecarpifolia, Q. floribunda and Abies spectabilis. However, active vegetative growth in herbaceous species starts onward April and fruit maturation and seed dehiscence are completed from mid of September to Octo...

  3. Gene expression profiles of different breast cancer cells compared with their responsiveness to fermented mistletoe (Viscum album L.) extracts Iscador from oak (Quercus), pine (Pinus), white fir (Abies) and apple tree (Malus) in vitro.

    Science.gov (United States)

    Eggenschwiler, Jenny; Patrignani, Andrea; Wagner, Ulrich; Rehrauer, Hubert; Schlapbach, Ralph; Rist, Lukas; Ramos, Mac H; Viviani, Angelika

    2006-06-01

    Cytotoxicity assays in vitro (MTT test) showed that the different breast cancer cell lines Kpl-1, MCF-7 and Mfm-223 respond differently to the mistletoe (Viscum album L.) preparations Iscador. Quercus (Qu), Abies (A), Malus (M) and Pinus (P). In order to determine the differences in the responsiveness of the cells more exactly, the gene expression profiles were determined by cells, which were treated with Mistletoe extracts, compared with untreated control cells. Such differences can be analysed in more detail by looking at the gene expression using Human Whole Genome microarray chips (41,000 genes). The results of the transcriptome analyses suggested that Iscador preparations influenced the overregulation of genes regarding immune defense, stress response, apoptosis and cell-cell adhesion pathways. Within the Mfm-223-Zellen was the Genexpression in MCF-7 and Kpl-1. The MCF-7 cells were affected on the genes which are involved in cell-cell contacts whereas Kpl-1 responded to the mistletoe extracts by changing the mRNA levels of the immune and stress response pathways. Concerning the effects of the mistletoe extract, we conclude that Iscador Qu and M have a greater influence on the immune defense and stress response genes whereas Iscador A tends to affect the cell-cell adhesion and cytoskeleton pathways. In summary, cDNA microarray analyses give us information on whether a cancer cell is sensitive to mistletoe extracts in relation to how many genes are significantly overrepresented after mistletoe treatment, and whether a particular mistletoe extract is more effective on a specific cancer cell than the other preparation.

  4. Regeneration of Abies cephalonica Loudon after a Large Fire in Central Greece

    Directory of Open Access Journals (Sweden)

    Yannis Raftoyannis

    2015-06-01

    Full Text Available Background and Purpose: Abies cephalonica Loudon (Greek fir is a dominant tree species of the mountainous Greece that forms productive forests. Wildfires in fir forests were not considered a major threat but in recent decades, fir ecosystems in Greece have experienced large crown fires with subsequent ecological and economical losses. Materials and Methods: This study was designed to aid our understanding of Greek fir recovery after fire. In Central Greece, 12 years after a large fire, fir regeneration and site factors were studied in 143 sampling plots located in 10 transects. Results: Fir regeneration density decreased abruptly with distance from the remnant stands and followed the negative exponential curve with decreasing regeneration abundance from the border of the unburned zone. Abiotic factors such as elevation, aspect, slope steepness and ground cover type could not significantly explain any variability in fir regeneration density. Conclusions: Our results showed that distance from a seed source was the most important variable in explaining fir regeneration. Moreover, the density of fir regeneration seemed adequate to provide stocking for a future fir forest.

  5. Animal damage to young spruce and fir in Maine

    Science.gov (United States)

    Barton M. Blum

    1977-01-01

    The loss of terminal buds on small balsam fir (Abies balsamea (L.) Mill.) and spruce (Picea spp.) trees because of nipping by mammals or birds has increased on the Penobscot Experimental Forest in recent years. The cut stem is smooth and slightly angled; there is no sign of tearing. Unnipped trees grew about 13 percent more than...

  6. Silver fir and Douglas fir are more tolerant to extreme droughts than Norway spruce in south-western Germany.

    Science.gov (United States)

    Vitali, Valentina; Büntgen, Ulf; Bauhus, Jürgen

    2017-12-01

    Improving our understanding of the potential of forest adaptation is an urgent task in the light of predicted climate change. Long-term alternatives for susceptible yet economically important tree species such as Norway spruce (Picea abies) are required, if the frequency and intensity of summer droughts will continue to increase. Although Silver fir (Abies alba) and Douglas fir (Pseudotsuga menziesii) have both been described as drought-tolerant species, our understanding of their growth responses to drought extremes is still limited. Here, we use a dendroecological approach to assess the resistance, resilience, and recovery of these important central Europe to conifer species the exceptional droughts in 1976 and 2003. A total of 270 trees per species were sampled in 18 managed mixed-species stands along an altitudinal gradient (400-1200 m a.s.l.) at the western slopes of the southern and central Black Forest in southwest Germany. While radial growth in all species responded similarly to the 1976 drought, Norway spruce was least resistant and resilient to the 2003 summer drought. Silver fir showed the overall highest resistance to drought, similarly to Douglas fir, which exhibited the widest growth rings. Silver fir trees from lower elevations were more drought prone than trees at higher elevations. Douglas fir and Norway spruce, however, revealed lower drought resilience at higher altitudes. Although the 1976 and 2003 drought extremes were quite different, Douglas fir maintained consistently the highest radial growth. Although our study did not examine population-level responses, it clearly indicates that Silver fir and Douglas fir are generally more resistant and resilient to previous drought extremes and are therefore suitable alternatives to Norway spruce; Silver fir more so at higher altitudes. Cultivating these species instead of Norway spruce will contribute to maintaining a high level of productivity across many Central European mountain forests under

  7. Understanding the physiology of postharvest needle abscission in balsam fir

    Directory of Open Access Journals (Sweden)

    Mason Thane Macdonald

    2015-11-01

    Full Text Available Balsam fir (Abies balsamea trees are commonly used as a specialty horticultural species for Christmas trees and associated greenery in eastern Canada and United States. Postharvest needle abscission has always been a problem, but is becoming an even bigger challenge in recent years presumably due to increased autumn temperatures and earlier harvesting practices. An increased understanding of postharvest abscission physiology in balsam fir may benefit the Christmas tree industry while simultaneously advancing our knowledge in senescence and abscission of conifers in general. Our paper describes the dynamics of needle abscission in balsam fir while identifying key factors that modify abscission patterns. Concepts such as genotypic abscission resistance, nutrition, environmental factors, and postharvest changes in water conductance and hormone evolution are discussed as they relate to our understanding of the balsam fir abscission physiology. Our paper ultimately proposes a pathway for needle abscission via ethylene and also suggests other potential alternative pathways based on our current understanding.

  8. Grand Fir Nutrient Management in the Inland Northwestern USA

    Directory of Open Access Journals (Sweden)

    Dennis R. Parent

    2016-11-01

    Full Text Available Grand fir (Abies grandis (Douglas ex D. Don Lindley is widely distributed in the moist forests of the Inland Northwest. It has high potential productivity, its growth being nearly equal to western white pine, the most productive species in the region. There are large standing volumes of grand fir in the region. Nutritionally, the species has higher foliage cation concentrations than associated conifers, especially potassium (K and calcium (Ca. In contrast, it has lower nitrogen (N foliage concentrations, which creates favorable nutrient balance on N-limited sites. Despite concentration differences, grand fir stores proportionally more nutrients per tree than associated species because of greater crown biomass. Although few fertilization trials have examined grand fir specifically, its response is inferred from its occurrence in many monitored mixed conifer stands. Fertilization trials including grand fir either as a major or minor component show that it has a strong diameter and height growth response ranging from 15% to 50% depending in part on site moisture availability and soil geology. Grand fir tends to have a longer response duration than other inland conifers. When executed concurrently with thinning, fertilization often increases the total response. Late rotation application of N provides solid investment returns in carefully selected stands. Although there are still challenges with the post-fertilization effects on tree mortality, grand fir will continue to be an important species with good economic values and beneficial responses to fertilization and nutrient management.

  9. Holocene vegetation and fire regimes in subalpine and mixed conifer forests, southern Rocky Mountains, USA

    Science.gov (United States)

    Anderson, R. Scott; Allen, Craig D.; Toney, J.L.; Jass, R.B.; Bair, A.N.

    2008-01-01

    Our understanding of the present forest structure of western North America hinges on our ability to determine antecedent forest conditions. Sedimentary records from lakes and bogs in the southern Rocky Mountains of Colorado and New Mexico provide information on the relationships between climate and vegetation change, and fire history since deglaciation. We present a new pollen record from Hunters Lake (Colorado) as an example of a high-elevation vegetation history from the southern Rockies. We then present a series of six sedimentary records from ???2600 to 3500-m elevation, including sites presently at the alpine?subalpine boundary, within the Picea engelmannii?Abies lasiocarpa forest and within the mixed conifer forest, to determine the history of fire in high-elevation forests there. High Artemisia and low but increasing percentages of Picea and Pinus suggest vegetation prior to 13 500 calendar years before present (cal yr BP) was tundra or steppe, with open spruce woodland to ???11 900 cal yr BP. Subalpine forest (Picea engelmannii, Abies lasiocarpa) existed around the lake for the remainder of the Holocene. At lower elevations, Pinus ponderosa and/or contorta expanded 11 900 to 10 200 cal yr BP; mixed conifer forest expanded ???8600 to 4700 cal yr BP; and Pinus edulis expanded after ???4700 cal yr BP. Sediments from lake sites near the alpine?subalpine transition contained five times less charcoal than those entirely within subalpine forests, and 40 times less than bog sites within mixed conifer forest. Higher fire episode frequencies occurred between ???12 000 and 9000 cal yr BP (associated with the initiation or expansion of south-west monsoon and abundant lightning, and significant biomass during vegetation turnover) and at ???2000?1000 cal yr BP (related to periodic droughts during the long-term trend towards wetter conditions and greater biomass). Fire episode frequencies for subalpine?alpine transition and subalpine sites were on average 5 to 10 fire

  10. Attempt to induce lightwood in balsam fir and tamarack by treating with paraquat

    Energy Technology Data Exchange (ETDEWEB)

    Kiatgrajai, P. (Univ. of Wisconsin, Madison); Conner, A.H.; Rowe, J.W.; Peters, W.; Roberts, D.R.

    1976-07-01

    Treatment of balsam fir (Abies balsamea (L.) Mill.) and tamarack (Larix laricina (Du Roi) K. Koch) with the herbicide paraquat did not induce formation of lightwood. However, a dead zone of phloem extended above the paraquat-treatment site. In balsam fir, the wood directly behind the dead zone was particularly heavily attacked by fungi. In both species, traumatic resin ducts were observed in the last several growth rings of wood adjacent to the treatment site. The ether extract of the tamarack, but not of the balsam fir, was essentially oleoresin.

  11. Bark beetle Polygraphus proximus: a new aggressive far eastern invader on Abies species in Siberia and European Russia

    Science.gov (United States)

    Yuri Baranchikov; Evgeniy Akulov; Sergey. Astapenko

    2011-01-01

    Polygraphus proximus Brandford (Coleoptera: Scolytidae) is a common feeder on Far Eastern firs: Abies nephrolepis, A. hollophyll, and A. sachalinensis. Its native range occupies northeastern China, Korea, Japan, Kurile and Sakhalin Islands, and the southern part of the Russian Far East (Primorskiy and...

  12. Northern flying squirrel mycophagy and truffle production in fir forests in northeastern California

    Science.gov (United States)

    J.R. Waters; K.S. McKelvey; C.J. Zabel; D.L. Luoma

    2000-01-01

    In this paper we summarize the results of four studies in which we either examined the feeding habits of the northern flying squirrel (Glaucomys sabrinus), a mycophagous (consuming fungi) small mammal, or compared the abundance of truffles (sporocarps of hypogeous mycorrhizal fungi) among different types of fir (Abies) forest....

  13. Growth of California red fir advance regeneration after overstory removal and thinning

    Science.gov (United States)

    William W. Oliver

    1985-01-01

    Advance regeneration is common under decadent, old-growth stands of California red fir (Abies magnifica A. Murr.). Intense competition for the site's resources can create sapling stands of poor vigor and advanced age. When competition is reduced by overstory removal and thinning, suppressed advance regeneration has been shown to respond with...

  14. de Abies religiosa

    Directory of Open Access Journals (Sweden)

    J. G. Álvarez-Moctezuma

    2008-01-01

    Full Text Available Los bosques de Abies religiosa en el Ajusco (México están en declinación. Se requiere reestablecer poblaciones a partir de algunos árboles supervivientes en laderas afectadas. Los objetivos fueron evaluar las condiciones in vitro que permitan el establecimiento aséptico de semillas y seleccionar el inóculo más adecuado para la producción de plántulas en A. religiosa. Para la germinación in vitro se probaron desinfectantes (H2O2, C2H5OH, NaOCl. Se evaluaron inóculos (semilla completa, embriones aislados completos o mitades -corte transversal-, y cotiledones y primeras hojas verdaderas de plántulas germinadas in vitro para su establecimiento in vitro. El mejor tratamiento para desinfectar la semilla de A. religiosa es sumergirla en H2O2 (3 % v/v y agitar 24 h. Los mejores inóculos para la propagación in vitro fueron la semilla completa y primeras hojas primarias.

  15. Species variation in susceptibility to the fungus Neonectria neomacrospora in the genus Abies

    DEFF Research Database (Denmark)

    Nielsen, Ulrik Braüner; Xu, Jing; Nielsen, Knud Nor

    2017-01-01

    ; significant differences were seen between taxa, that is, species, and between some species and their subspecies. The Greek fir, Abies cephalonica, was the only species without damage. An inoculation experiment on detached twigs with mycelium plugs from a N. neomacrospora culture showed that all species could......The fungus Neonectria neomacrospora has recently caused an epidemic outbreak in conifer species within the genus Abies in Denmark and Norway. Christmas tree producers in Europe and North America rely, to a large extent, on Abies species. The damage caused by N. neomacrospora, including dead shoot...... be infected. The damage observed in the inoculation experiment could explain 30% of the variation in the field observations based on species mean values. The epidemic outbreak and the high number of species susceptible to this fungus indicate that N. neomacrospora requires attention in the cultivation...

  16. Cloud immersion alters microclimate, photosynthesis and water relations in Rhododendron catawbiense and Abies fraseri seedlings in the southern Appalachian Mountains, USA

    Science.gov (United States)

    Daniel M. Johnson; William K. Smith

    2008-01-01

    The high altitude spruce-fir (Abies fraseri (Pursh) Poiret.-Picea rubens Sarg.) forests of the southern Appalachian Mountains, USA, experience frequent cloud immersion. Recent studies indicate that cloud bases may have risen over the past 30 years, resulting in less frequent forest cloud immersion, and that further increases in...

  17. Cloud immersion alters microclimate, photosynthesis and water relations in Rhododendron catawbiense and Abies fraseri seedlings in the southern Appalachian Mountains, USA

    Science.gov (United States)

    Daniel M. Johnson; William K. Smith

    2008-01-01

    The high altitude spruce-fir (Abies fraseri (Pursh) Poiret.-Picea rubens Sarg.) forests of the southern Appalachian Mountains, USA, experience frequent cloud immersion. Recent studies indicate that cloud bases may have risen over the past 30 years, resulting in less frequent forest cloud immersion, and that further increases in cloud base height are...

  18. Structure and function of flexure wood in Abies fraseri.

    Science.gov (United States)

    Telewski, F W

    1989-03-01

    Wood produced during flexure in one-year-old leaders of Abies fraseri (Pursh) Poir. (Fraser fir) was analyzed anatomically and radio-densitometrically. More xylem cells were produced in stems subjected to flexing than in stems that were not flexed. The lumens of tracheids produced in response to flexure were smaller than the lumens of tracheids in normal wood. This was manifest as an increase in the cell wall area/cell lumen area ratio. Microfibril orientation in flexure-induced wood approached the less extreme values found in compression wood. The growth ring composed of flexure-induced wood also had a greater density than normal wood. Compression wood, as defined by cellular characteristics observed in transverse section, was absent in flexed stems. Detailed analysis of the anatomical structure, wood density and biomechanical properties of flexure-induced wood indicated that it has more in common with compression wood than with normal wood.

  19. Survival and growth of northern white-cedar and balsam fir seedlings in riparian management zones in northern Minnesota, USA

    Science.gov (United States)

    Brian J. Palik; Brooke K. Haworth; Andrew J. David; Randall K. Kolka

    2015-01-01

    Northern white-cedar (Thuja occidentalis) and balsam fir (Abies balsamea.) are co-occurring species in riparian forests of the western Great Lakes region. Throughout much of the region, northern white-cedar has been experiencing population declines due to herbivory by white-tailed deer (Odocoileus virginianus)....

  20. Impacts of cloud immersion on microclimate, photosynthesis and water relations of fraser fir in a temperate mountain cloud forest

    Science.gov (United States)

    Keith Reinhardt; William K. Smith

    2010-01-01

    The red spruce-Fraser fir ecosystem (Picea rubens Sarg.-Abies fraseri [Pursh] Poir.) of the southern Appalachian mountains is a temperate zone cloud forest immersed in clouds for 30 to 40 percent of a typical summer day, and experiencing immersion on about 65 percent of all days annually. We compared the microclimate,...

  1. Seed maturity in white fir and red fir

    Science.gov (United States)

    William W. Oliver

    1974-01-01

    White fir and red fir seed collected over a 2-month period in northern California was tested for germination of fresh and stratified seed. Ratio of embryo length to embryo cavity length was found to be the most useful index of seed maturity for white and red fir. Cone specific gravity also was correlated with nearly all measures of seed germination. Data suggest that...

  2. Imago feeding preference of the black fir sawyer Monochamus urussovi Fisch. (Coleoptera: Cerambycidae

    Directory of Open Access Journals (Sweden)

    Grodnitsky Dmitry

    2017-03-01

    Full Text Available Mass outbreaks of the black fir sawyer M. urussovi regularly occur in forest stands dominated by Siberian fir Abies sibirica; outbreaks have been observed only on fir and exclusively in Siberia, although the beetle is also found in the vast territory including Finland, Poland, Ukraine, Kazakhstan, China, Russian Far East and Japan. A closely related common species M. sutor has never produced outbreaks; its larvae have been registered only in Scots pine. Feeding preferences of the two species were compared under experimental conditions; total numbers of tested specimens were 132 (M. urussovi and 40 (M. sutor. M. sutor beetles were caught in nature, M. urussovi pupas and young adults were collected from fir trunks; pupas were reared to beetles. Each beetle was placed into a covered plastic enclosure for 24 hours and offered cut shoots of fir, spruce, Siberian pine, Scots pine, larch, birch and willow; all cuts were of the same length and diameter, needles and leaves had been previously removed. Beetles of the two species showed different feeding preference. M. sutor imagoes completely ignored fir shoots, definitely preferring Scots pine. M. urussovi feeding behavior was different: beetles did consume bark, bast and cambium of fir. However, they were mainly fed on Scots pine shoots. Feeding preference given to Scots pine by beetles grown in fir trunks can be explained by the hypothesis that this species originated on pine. Mass outbreaks of M. urussovi in Siberian fir-dominated forest ecosystems occur, because these plant communities are historically young (evidently much less than 10 000 years and yet unbalanced, transitional sort of ecosystems, so fir did not have enough evolutionary time to get adapted to injure by the sawyer and Ophiostoma fungi carried by beetles.

  3. Douglas-Fir Tussock Moth

    Science.gov (United States)

    Boyd E. Wickman; Richard R. Mason; Galen C. Trostle

    1981-01-01

    The Douglas-fir tussock moth (Orgyia pseudotsugata McDunnough) is an important defoliator of true firs and Douglas-fir in Western North America. Severe tussock moth outbreaks have occurred in British Columbia, Idaho, Washington, Oregon, Nevada, California, Arizona, and New Mexico, but the area subject to attack is more extensive

  4. Wood quality and value production in mixed fir-spruce-beech stands: long-term research in the Western Carpathians

    Directory of Open Access Journals (Sweden)

    Petráš Rudolf

    2016-06-01

    Full Text Available Stem quality and damage was evaluated in mixed spruce-fir-beech stands. Moreover, an assortments structure was determined with their financial value. Results were compared with pure spruce (Picea abies [L.] Karst., fir (Abies alba Mill. and beech (Fagus sylvatica L. stands. Repeated measurements on 31 long-term research plots, stand assortment models, assortment yield models and value yield models were used. Stem quality of fir and spruce was only slightly lower in mixed stands compared to pure stands but beech stem quality was considerably worse in mixed stands. Fir and spruce had slightly lower proportions of better IIIA quality logs and higher proportions of IIIB quality in mixed stands. Beech had worse assortment structure than spruce and fir, in general. Pure beech stands had higher proportions of better I–IIIA quality assortments than mixed stands by 1–7%. Fir and spruce average value production (€ m−3 culminated at about 56 and 62 cm mean diameters. Almost the same value production was found in pure stands. In these stands it culminated at the mean diameter of 58 and 60 cm. Beech produced substantially less value on the same sites. In mixed stands, its value production culminated at the mean diameter of 40 cm. In pure stands, it culminated at the mean diameter of 36 cm. Although the production was found to be similar in both mixed and pure forests, higher damage intensity and less stem quality in mixed forests suggest that the pure forests can be more profitable.

  5. Modelling initial mortality of Abies religiosa in a crown fire in Mexico

    OpenAIRE

    Temiño Villota, Salomé; Rodríguez Trejo, Dante A.; Molina Terrén, Domingo; Ryan, Kevin C.

    2016-01-01

    Aim of study: The objectives of this work were to determine which morphological and fire severity variables may help explain the mortality of adult Abies religiosa (Kunth) Schltdl. & Cham., to model the probability of this species after being affected by crown fire, and to obtain more elements to classify the sacred fir in terms of fire resistance. This type of studies are relevant to estimate the impact of crown fires on the climax forests that forms this species.Area of study: The burne...

  6. Protocol for fir tree sampling for provenance studies

    Science.gov (United States)

    Meisel, Thomas; Bandoniene, Donata; Zettl, Daniela

    2014-05-01

    Isotopic (stable and radiogenic) as well as trace element fingerprinting methods used for tracing the geographical origin, rely on databases, that need to contain data sets representative of the measurands of the individual samples for a specific geographic entity. Through this work, we want to assess different sampling strategies for obtaining representative sample of fir trees (Abies sp.). Motivation for this work is the protection of the local Austrian Christmas tree market from wrongly tagged trees of non-Austrian origin. In particular, we studied three typical Christmas trees the most common species sold as Christmas tree, namely Abies nordmanniana (Nordmann Fir), from the same locality in lower Austria. For the initial tests we applied the elemental fingerprinting method, to study the suitability of the different parts of the tree applying ICP-MS analysis after complete acid digestion in a high pressure asher system (HPA-S).Needle samples from each year of life of the tree and stem wood from three different heights were analyzed for their trace element content to prove the repeatability and to find the best sampling protocol. For the analysis of the needles, the natural wax coating had to be removed in order to get reproducible results. For the analysis of stem wood only the bark was removed. As expected the data of all three trees allowed the differentiation of the individual needle ages, but interestingly enough also between the three sampling heights of the needs. Both needles and wood proved to be suitable for successful fingerprinting, but importantly, provided that sample of the same type and ages are compared. The same samples for the three trees will also be used for isotopic analysis studies to better understand the influence of age and sampling height on the representativeness of fir tree samples. Based on elemental fingerprinting alone, a successful discrimination between local (Austrian) and foreign (Danish, Irish) Christmas trees was possible.

  7. Pharmacological activity of Abies pindrow.

    Science.gov (United States)

    Singh, R K; Bhattacharya, S K; Acharya, S B

    2000-11-01

    The widely known tree Abies pindrow (Talisapatra) (family: Pinaceae), famous for its diverse clinical uses in Ayurvedic medicines, was investigated to rationalise some of the ancient claims. The petroleum ether (PE), benzene (BE), chloroform (CE), acetone (AE) and ethanol (EE) extracts of A. pindrow leaf were found to have mast cell stabilizing action in rats. The EE, AE and BE extracts offered bronchoprotection against histamine challenge in guinea-pigs. The BE, CE and PE extracts had protective role in aspirin-induced ulcer in rats. The results suggest that while terpenoids, flavonoids, glycosides and steroids are involved in mast cell protection, terpenoids and flavonoids are brochoprotective against histamine-induced bronchospasm. The ulcer protective action of PE, BE and CE fractions of A. pindrow may be attributable to steroids contents only because though all the extracts tested positive for glycosides, the extracts EE and AE did not have any ulcer protective role.

  8. Provenance variation in subalpine fir grown as an exotic tree species in Denmark and Iceland

    DEFF Research Database (Denmark)

    Skúlason, Brynjar

    in a period of 15 growing seasons after establishment. Provenances showed significant differences for all measured traits. The northernmost provenances showed earliest bud set, highest autumn frost tolerance and a latitudinal cline was delineated, while the southernmost provenances showed earliest flushing...

  9. Long-term landscape changes in a subalpine spruce-fir forest in central Utah, USA

    Science.gov (United States)

    Jesse L. Morris; R. Justin DeRose; Andrea R. Brunelle

    2015-01-01

    In Western North America, increasing wildfire and outbreaks of native bark beetles have been mediated by warming climate conditions. Bioclimatic models forecast the loss of key high elevation species throughout the region. This study uses retrospective vegetation and fire history data to reconstruct the drivers of past disturbance and environmental change....

  10. [Plants associated to Abies guatemalensis (Pinaceae) forests in Western Guatemala].

    Science.gov (United States)

    Arévalo, José Vicente Martínez

    2013-03-01

    The fragments of Abies guatemalensis forests in Western Guatemala are the reservoirs of plant species that have been poorly documented, missing the opportunity to expand the knowledge of the local flora and its use in conservation planning. To assess this, a floristic study was done in areas between 2 950-3 360masl in Western Guatemala between 2010-2011. Ten locations were sampled: in each a 500m2 plot was surveyed, and plants were classified in four strata by plant height (0.05-30m). A total of 119 species, 92 genera and 50 families in four divisions were found. The families with more species were Asteraceae, Poaceae, Rosaceae, Lamiaceae, Apiaceae and Solanaceae, and the most abundant genera were Salvia, Alchemilla and Bidens. The number of species found by strata was: 33 (low herbaceous), 49 (high herbaceous), 30 (shrubs) and seven in the tree strata. Regarding geographical distribution, the biggest species group detected was from central Mexico to Central America with 67%, which compared to the forests of A. guatemalensis in central and Southern Mexico, showed high floristic affinity, especially at the family and genus level. However, even having families and genera in common in the general structure of the fir forests, their floristic particularities should be taken into account when making management and conservation plans, because these are influenced by soil, latitude and microclimate conditions.

  11. Wood anatomical relationships within Abies spp. from the Mediterranean area: a phyletic approach

    Energy Technology Data Exchange (ETDEWEB)

    Esteban, L. G.; Palacios, P. de; Garcia Fernandez, F.; Martin, J. A.

    2009-07-01

    An analysis was made of the wood anatomy of seven species, one subspecies and two varieties of the genus Abies from the Mediterranean area (A. alba, A. borisii-regis, A. cephalonica, A. cilicica, A. nordmanniana, A. nordmanniana subsp. equi-trojani, A. numidica, A. pinsapo, A. pinsapo var. marocana and A. pinsapo var. tazaotana) in order to find phyletically relevant features to help clarify and complement the evolutionary patterns based on molecular studies. The wood structure within the genus was qualitatively similar, except for specific features characteristic of certain provenances. However, the wood biometry allowed the different taxa to be grouped in accordance with their anatomical similarity. A. alba, A. pinsapo, A. pinsapo var. marocana and A. pinsapo var. tazaotana possess biometric features which distinguish them from the other Mediterranean firs. Furthermore, A. numidica showed biometric features which distinguish it from the eastern firs (A. borisii-regis, A. cephalonica, A. cilicica, A. nordmanniana and A. nordmanniana subsp. equi-trojani) and place it closer to certain Iberian populations of A. pinsapo. The maximum ray height in number of cells, frequency of rays with more than 30 cells and tracheid length can be regarded as specific patterns of the Mediterranean fir phylum. (Author) 72 refs.

  12. Elevation Shift in Abies Mill. (Pinaceae) of Subtropical and Temperate China and Vietnam-Corroborative Evidence from Cytoplasmic DNA and Ecological Niche Modeling.

    Science.gov (United States)

    Shao, Yi-Zhen; Zhang, Xian-Chun; Phan, Loc Ke; Xiang, Qiao-Ping

    2017-01-01

    The "elevational shift" scenario has been proposed as a model to explain the response of cold-adapted organisms to Quaternary climatic fluctuations in Europe and North America. However, the elevational shift model has not been well-explored in eastern Asia, which is more topographically complex than the other Northern Hemisphere biogeographic regions. Here, we evaluated the role of elevational shift in the closely related firs, or Abies Mill., of subtropical and temperate China. These firs are typical alpine trees with sensitivity to climate change. We tested the elevational shift hypothesis in firs of China using phylogeographic methods and ecological niche models. Our phylogeographic analyses comprised mitochondrial and chloroplast polymorphisms surveyed across 479 individuals from 43 populations representing 11 species. M1 of the 11 mitotypes and C1 of the 25 chlorotypes were inferred as the ancestral haplotype, and they had the widest distribution. The results of our phylogeographic survey revealed multiple centers of genetic diversity in distinct geographic regions and no latitudinal trend. Moreover, our results showed range expansions for seven taxa during the last glacial (64.9-18.2 or 32.5-9.1 kya), and this was consistent with the Quaternary fossil record of Abies in China. Taken together, our findings support a historical biogeographic pattern in firs of glacial expansions, probably through corridors at lower elevation, and interglacial fragmentations, through isolation at higher elevation peaks. Therefore, Abies in China probably undergoes elevational shift in response to climate change. Facing the forecasting global warming, the risk of several critically endangered firs was further enhanced as these species would have little escape space in situ to higher altitudes. According to our ENMs, we proposed an ex situ conservation strategy in the southern Hengduan Mountains region of south western China.

  13. Monitoring the Epidemic of Bark Beetles Determined in Uludag Fir Stands in Ilgaz (Derbent and Doruk) via Landsat Satellite Images

    OpenAIRE

    KONDUR, Yalçın; BİLGİLİ, Bayram Cemil; Şimşek, Ziya; ÖNER, Nuri

    2014-01-01

    Results of the studies carried out in Ilgaz (Derbent and Doruk) in 1999-2000 showed that Cryphalus piceae (Ratz.), Ips acuminatus (Gyll.), Orthotomicus erosus (Woll.), Pityogenes quadridens (Hartig), Ips (Pityokteines) curvidens (Germ.), Tryphodendron lineatus (Oliver) (Scolytidae), Pissodes piceae (Illig.) (Curculionidae) were important insect species where the Uludag fir (Abies nordmanniana subsp. bornmulleriana Mattf.) is the dominant tree species at altitudes between 1,700 and 2,000 m, mo...

  14. First results on early post-fire succession in an Abies cephalonica forest (Parnitha National Park, Greece)

    OpenAIRE

    Ganatsas P; Daskalakou E; Paitaridou D

    2012-01-01

    Due to climate changes, the interest in the post-fire recovery of forest communities not adapted to wildfires, such as Greek fir (Abies cephalonica) forests, has increased. In this study, the post-fire recovery of the burned A. cephalonica forest of Parnitha National Park (central Greece) was investigated after a stand-replacing fire occurred in summer 2007, as well as the performance of A. cephalonica plantings in the post-fire conditions. The research focused on the estimation of the A. cep...

  15. Damage from wind and other causes in mixed white fir-red fir stands adjacent to clearcuttings

    Science.gov (United States)

    Donald T. Gordon

    1973-01-01

    Damage to timber surrounding clearcuttings and in one light selection cutting in mixed white fir-red fir stands was monitored for 6 years in northeastern California. In some years, bark beetles apparently killed more trees than did wind damage, but in two of the study years, severe wind storms caused much damage. One storm produced mainly break-age, apparently...

  16. Leader growth in Nordman fir christmas trees

    DEFF Research Database (Denmark)

    Christensen, Claus Jerram; Pedersen, Lars Bo

    Leader Griowth in Nordman fir Christmas trees: Growth visualization and effects of fertilization, irrigation and drought......Leader Griowth in Nordman fir Christmas trees: Growth visualization and effects of fertilization, irrigation and drought...

  17. Mycocoenology in Abies alba Miller woods of central-southern Tuscany (Italy

    Directory of Open Access Journals (Sweden)

    Angela Laganà

    2014-01-01

    Full Text Available Numerous reports indicate that fir woods in central and northern Europe have recently been damaged by increasing pollution. It has been demonstrated that fungi can be good bioindicators of forest health status. In polluted areas the production of fruit bodies generally declines and the fungal biodiversity, especially of symbiotic species, is reduced. Here we report the results of a survey of the fungal and plant communities in woods of Abies alba Miller in central-southern Tuscany, already studied in the past. Certain changes were observed in the study areas, but they seem more likely to be due to other factors than pollution, such as the weather conditions, the age and natural evolution of the forests towards their climax.

  18. Modelling initial mortality of Abies religiosa in a crown fire in Mexico

    Directory of Open Access Journals (Sweden)

    Salomé Temiño-Villota

    2016-04-01

    Full Text Available Aim of study: The objectives of this work were to determine which morphological and fire severity variables may help explain the mortality of adult Abies religiosa (Kunth Schltdl. & Cham., to model the probability of this species after being affected by crown fire, and to obtain more elements to classify the sacred fir in terms of fire resistance. This type of studies are relevant to estimate the impact of crown fires on the climax forests that forms this species.Area of study: The burned forest was located in the southern Mexico City, borough.Material and methods: Morphological variables and fire severity indicators were collected for 335 Abies religiosa trees burned by a mixed severity fire. Logistic regression was used to analyze data and develop models that best explained tree mortality.Main results: Survival was 26.9%. The models for height (p≤0.0001, diameter at breast height (p=0.0082, crown length (p≤0.0001 and crown base height (p≤0.0001 were significant, with a negative relationship between each one of these variables and probability of mortality. The significant severity variables were lethal scorch height (p≤0.0001 and crown kill (p≤ 0.0001, which have a direct relationship with probability of mortality.Highlights: This species is moderately fire-resistant. Crown kill ≥ 70% markedly increases mortality. Silvicultural activities such as pruning, thinning and fuel management can reduce the risk of crown fires.

  19. Modelling initial mortality of Abies religiosa in a crown fire in Mexico

    Energy Technology Data Exchange (ETDEWEB)

    Temiño-Villota, S.; Rodríguez-Trejo, D.A.; Molina Terrén, D.M.; Ryan, K.

    2016-07-01

    Aim of the study: The objectives of this work were to determine which morphological and fire severity variables may help explain the mortality of adult Abies religiosa (Kunth) Schltdl. & Cham., to model the probability of this species after being affected by crown fire, and to obtain more elements to classify the sacred fir in terms of fire resistance. This type of studies are relevant to estimate the impact of crown fires on the climax forests that forms this species. Area of study: The burned forest was located in the southern Mexico City, borough. Material and methods: Morphological variables and fire severity indicators were collected for 335 Abies religiosa trees burned by a mixed severity fire. Logistic regression was used to analyze data and develop models that best explained tree mortality. Main results: Survival was 26.9%. The models for height (p≤0.0001), diameter at breast height (p=0.0082), crown length (p≤0.0001) and crown base height (p≤0.0001) were significant, with a negative relationship between each one of these variables and probability of mortality. The significant severity variables were lethal scorch height (p≤0.0001) and crown kill (p≤ 0.0001), which have a direct relationship with probability of mortality. Highlights: This species is moderately fire-resistant. Crown kill ≥ 70% markedly increases mortality. Silvicultural activities such as pruning, thinning and fuel management can reduce the risk of crown fires. (Author)

  20. Reconstruction of January–April discharge of Zemu Chuu – A first stage of Teesta River North Sikkim Eastern Himalaya based on tree-ring data of fir

    OpenAIRE

    Shekhar, Mayank; Bhattacharyya, Amalava

    2015-01-01

    Study region: Zemu Chuu (river), Lachen, North Sikkim, Eastern Himalaya India. Study focus: Using tree-ring data of fir (Abies densa) the temporal variation of 222 years January–April mean discharge of Zemu Chuu, upper reaches of the Teesta River at Lachen, North Sikkim Eastern Himalaya was investigated. This was based on linear regression reconstruction model which explained variance of 50.1% during calibration period (AD 1976–1996). The model was verified by reduction of error (RE), sign...

  1. Comparison of Wood Quality of Douglas Fir and Spruce from Afforested Agricultural Land and Permanent Forest Land in the Czech Republic

    Directory of Open Access Journals (Sweden)

    Aleš Zeidler

    2017-12-01

    Full Text Available This study compares the quality of wood from two distinct sites in the Czech Republic—from former afforested agricultural land and forest land. We compared the properties of Norway spruce wood (Picea abies Karst. and Scots pine wood (Pinus sylvestris L., the most important domestic tree species, to Douglas fir (Pseudotsuga menziesii (Mirbel Franco, a North American tree species and a potential substitute for the domestic spruce. Wood density, modulus of elasticity (MOE, modulus of rupture (MOR and impact bending strength were the properties tested that were used for comparing tree species. Without taking into consideration the site, the highest density values from the tested tree species were obtained for Douglas fir (0.568 g·cm−3, followed by the pine (0.508 g·cm−3 and the spruce (0.463 g·cm−3. The Douglas fir also dominated in the remaining assessed properties, whilst the influence of site was not confirmed, with the exception of MOE and MOR, and only for the Douglas fir wood, wherein higher values were obtained for forest land. In terms assessed Douglas fir properties, it exceeds the domestic softwoods and represents a possible suitable replacement for them. The site only plays a role in terms of the Douglas fir, and only for certain properties.

  2. Growth Response of Silver Fir and Bosnian Pine from Kosovo

    Directory of Open Access Journals (Sweden)

    Elvin Toromani

    2010-06-01

    Full Text Available Background and Purpose: This paper explore the growth-climate relationships in total ring width chronologies of silver fir (Abies alba Mill. and Bosnian pine (Pinus heldreichii Christ. The objective of this study is to quantify the climate influence on radial growth of both species. The relationships between climate and ring widths were analyzed using extreme growing years (called pointer years, simple correlations and response functions analysis (bootstrapped coefficients. The objectives of this study were: (1 to define the pattern of climatic response of each species, (2 to highlight the influence of local ecological conditions on tree's growth, and (3 to compare the response of silver fir and Bosnian pine to climate. Responses of total ring width to climate were estimated by establishing the mean relationship between growth and climate through simple correlations analysis and bootstrapped response functions. The response to climatic variability was also assessed by analyzing pointer years which correspond to abrupt changes in growth pattern and revealing the tree-growth response to extreme climatic events. For the period 1908-2008 the mean sensitivity (MS of total ring width chronology for Bosnian pine (0.209 was higher than silver fir (0.169 suggesting that Bosnian pine is more sensitive to climate (pointer years were more frequent in ring width chronology of Bosnian pine than in silver fir ring width chronology. The high values of first-order autocorrelations for Bosnian pine (0.674 indicated a strong dependence of current growth on the previous year’s growth. Pointer years analysis underlined the high sensitivity to spring temperatures and precipitation for both species. Radial growth for both species depends strongly on spring climate variables (temperatures and precipitation which play a significant role particularly for earlywood production. Material and Methods: We selected 12 silver fir trees and 15 Bosnian pine trees and took two 5

  3. Distinct genecological patterns in seedlings of Norway spruce and silver fir from a mountainous landscape.

    Science.gov (United States)

    Frank, Aline; Sperisen, Christoph; Howe, Glenn Thomas; Brang, Peter; Walthert, Lorenz; St Clair, John Bradley; Heiri, Caroline

    2017-01-01

    Understanding the genecology of forest trees is critical for gene conservation, for predicting the effects of climate change and climate change adaptation, and for successful reforestation. Although common genecological patterns have emerged, species-specific details are also important. Which species are most vulnerable to climate change? Which are the most important adaptive traits and environmental drivers of natural selection? Even though species have been classified as adaptive specialists vs. adaptive generalists, large-scale studies comparing different species in the same experiment are rare. We studied the genecology of Norway spruce (Picea abies) and silver fir (Abies alba), two co-occurring but ecologically distinct European conifers in Central Europe. For each species, we collected seed from more than 90 populations across Switzerland, established a seedling common-garden test, and developed genecological models that associate population variation in seedling growth and phenology to climate, soil properties, and site water balance. Population differentiation and associations between seedling traits and environmental variables were much stronger for Norway spruce than for silver fir, and stronger for seedling height growth than for bud phenology. In Norway spruce, height growth and second flushing were strongly associated with temperature and elevation, with seedlings from the lowlands being taller and more prone to second flush than seedlings from the Alps. In silver fir, height growth was more weakly associated with temperature and elevation, but also associated with water availability. Soil characteristics explained little population variation in both species. We conclude that Norway spruce has become an adaptive specialist because trade-offs between rapid juvenile growth and frost avoidance have subjected it to strong diversifying natural selection based on temperature. In contrast, because silver fir has a more conservative growth habit, it has

  4. Development of synthetic GOES-R ABI aerosol products

    OpenAIRE

    R. M. Hoff; Kondragunta, S.; Ciren, P.; Xu, C.; Zhang, H.; A. Huff

    2014-01-01

    An Observing Systems Simulation Experiment (OSSE) for GOES-R Advanced Baseline Imager (ABI) aerosol products has been carried out. The generation of simulated data involves prediction of aerosol chemical composition fields at one-hour resolution and 12 km × 12 km spacing. These data are then fed to a radiative transfer model to simulate the on-orbit radiances that the GOES-R ABI will see in six channels. This allows the ABI aerosol algorithm to be tested to pro...

  5. Using the Resistograph®to distinguish different types of wood rot on living silver fir in Molise (Italy

    Directory of Open Access Journals (Sweden)

    Lasserre B

    2010-10-01

    Full Text Available he study was performed in two silver-fir forests (Abies alba Mill. located in Alto Molise, Province of Isernia: Collemeluccio, near Pescolanciano and Abeti Soprani near Capracotta. The aim of this work was to distinguish different types of wood rot on living silver fir individuals by using the Resistograph® (IML-RESI E400, a device that allows to estimate the variation of wood density by measuring the resistance to micro-perforation. The occurrence of different types of wood rot (white rot and brown rot in living trees was pointed out and discriminated by the device. In the detected deteriorated zones, fungal pathogens and decomposers were isolated and identified, causing either white (Phellinus hartigii, Ganoderma adspersum, Heterobasidion abietinum and Armillaria ostoyae or brown rot (Fomitopsis pinicola.

  6. Detector level ABI spectral response function: FM4 analysis and comparison for different ABI modules

    Science.gov (United States)

    Efremova, Boryana; Pearlman, Aaron J.; Padula, Frank; Wu, Xiangqian

    2016-09-01

    A new generation of imaging instruments Advanced Baseline Imager (ABI) is to be launched aboard the Geostationary Operational Environmental Satellites - R Series (GOES-R). Four ABI flight modules (FM) are planned to be launched on GOES-R,S,T,U, the first one in the fall of 2016. Pre-launch testing is on-going for FM3 and FM4. ABI has 16 spectral channels, six in the visible/near infrared (VNIR 0.47 - 2.25 μm), and ten in the thermal infrared (TIR 3.9 - 13.3 μm) spectral regions, to be calibrated on-orbit by observing respectively a solar diffuser and a blackbody. Each channel has hundreds of detectors arranged in columns. Operationally one Analytic Generation of Spectral Response (ANGEN) function will be used to represent the spectral response function (SRF) of all detectors in a band. The Vendor conducted prelaunch end-to-end SRF testing to compare to ANGEN; detector specific SRF data was taken for: i) best detector selected (BDS) mode - for FM 2,3, and 4; and ii) all detectors (column mode) - for four spectral bands in FM3 and FM4. The GOES-R calibration working group (CWG) has independently used the SRF test data for FM2 and FM3 to study the potential impact of detector-to-detector SRF differences on the ABI detected Earth view radiances. In this paper we expand the CWG analysis to include the FM4 SRF test data - the results are in agreement with the Vendor analysis, and show excellent instrument performance and compare the detector-to-detector SRF differences and their potential impact on the detected Earth view radiances for all of the tested ABI modules.

  7. Nutrient status in soil of Ski runs in the sub-alpine belt of Uludag Mountain, Bursa, Turkey.

    Science.gov (United States)

    Guleryuz, Gurcan; Kirmizi, Serap; Arslan, Hulya

    2010-01-01

    Large areas of land are disturbed in sensitive bio-diverse mountain environments by Skiruns. Restoration of vegetation on such disturbed mountain sites may be hampered by soil degradation but the severity and nature of the constraints is not well understood. This study was designed to compare the water holding and nutritional status of soil in three Ski runs which had different construction dates and disturbance levels, and the adjacent undisturbed site in the Abies bommuelleriana forest community in the sub-alpine belt of Uludag Mountain (Bithynian Olympus). The values of soil parameters were depressed in proportion to the disturbance level. Water holding capacity (WHC), total nitrogen (N), organic carbon (C) and calcium (Ca2+), magnesium (Mg2+) and potassium (K+) contents (mg kg(-1) dry weight) of soils in the Ski run which had the highest disturbance level were lower than that of the undisturbed adjacent sites. However the results indicated that the soil parameters were less degraded when secondary vegetation was growing on the disturbed areas.

  8. Seasonal dynamics of structure and functional activity of ectomycorrhizal roots of the Siberian fir

    Directory of Open Access Journals (Sweden)

    T. A. Sizonenko

    2017-12-01

    Full Text Available The aim of our work was to study seasonal dynamics of the Siberian fir Abies sibirica Ledeb. ectomycorrhizal morpho-anatomical structure, respiration rate and fluorescence. The study was carried out in the bilberry-sphagnum spruce forest in the middle taiga of the Komi Republic, Russia. The morpho-anatomical structure and fluorescence parameters were studied by light and luminescence microscopy. Thin root respiration was studied in intact fine roots in the field using an infrared gas analyzer. 12 subtypes of fungal mantels were revealed in ectomycorrhizal fir roots; their amount and composition demonstrated seasonal dynamic changes. At the beginning vegetation stage, the diversity and proportion of pseudoparenchymatous and double covers were maximal. Plant component of ectomycorrhizae that includes cortical parenchyma and stele had high activity of fluorescence during the entire vegetation period. The dynamics of staining of fungal component (fungal mantel and Hartig net was more contrasting. The highest fluorescence intensity of cortical parenchyma was found in ectomycorrhizae with maximal fungal mantel thickness. High proportion of tannin cells in cortical parenchyma was related with low intensity of fungal mantel and Hartig net fluorescence. During vegetation season, maximal amount of intensively strained ectomycorrhizal elements occurred in July and unstrained – in June and August. Relation between fine roots respiration and an increase of brightly strained ectomycorrhizal structural elements in fir roots was not statistically significant. Root CO2-emission was lower in May and September in comparison with summer months. For respiration rate of fir fine roots we found its strong positive correlation with the litter temperature.

  9. Evaluation of storage and filtration protocols for alpine/subalpine lake water quality samples

    Science.gov (United States)

    John L. Korfmacher; Robert C. Musselman

    2007-01-01

    Many government agencies and other organizations sample natural alpine and subalpine surface waters using varying protocols for sample storage and filtration. Simplification of protocols would be beneficial if it could be shown that sample quality is unaffected. In this study, samples collected from low ionic strength waters in alpine and subalpine lake inlets...

  10. Ozone and modeled stomatal conductance at a high elevation subalpine site in southeastern Wyoming

    Science.gov (United States)

    Robert C. Musselman; Karl F. Zeller; Nedialko T. Nikolov

    1998-01-01

    Ozone concentrations have been monitored at the Glacier Lakes Ecosystem Experiment Site (GLEES) in the Snowy Range of the Medicine Bow Mountains 55 km west of Laramie, Wyoming, USA. The site is located at 3,186 m elevation in a large subalpine meadow of a mature subalpine forest near timberline. Continuous ozone and meteorological monitoring are a part of the GLEES...

  11. Fire, fuel composition and resilience threshold in subalpine ecosystem.

    Directory of Open Access Journals (Sweden)

    Olivier Blarquez

    Full Text Available BACKGROUND: Forecasting the effects of global changes on high altitude ecosystems requires an understanding of the long-term relationships between biota and forcing factors to identify resilience thresholds. Fire is a crucial forcing factor: both fuel build-up from land-abandonment in European mountains, and more droughts linked to global warming are likely to increase fire risks. METHODS: To assess the vegetation response to fire on a millennium time-scale, we analyzed evidence of stand-to-local vegetation dynamics derived from sedimentary plant macroremains from two subalpine lakes. Paleobotanical reconstructions at high temporal resolution, together with a fire frequency reconstruction inferred from sedimentary charcoal, were analyzed by Superposed Epoch Analysis to model plant behavior before, during and after fire events. PRINCIPAL FINDINGS: We show that fuel build-up from arolla pine (Pinus cembra always precedes fires, which is immediately followed by a rapid increase of birch (Betula sp., then by ericaceous species after 25-75 years, and by herbs after 50-100 years. European larch (Larix decidua, which is the natural co-dominant species of subalpine forests with Pinus cembra, is not sensitive to fire, while the abundance of Pinus cembra is altered within a 150-year period after fires. A long-term trend in vegetation dynamics is apparent, wherein species that abound later in succession are the functional drivers, loading the environment with fuel for fires. This system can only be functional if fires are mainly driven by external factors (e.g. climate, with the mean interval between fires being longer than the minimum time required to reach the late successional stage, here 150 years. CONCLUSION: Current global warming conditions which increase drought occurrences, combined with the abandonment of land in European mountain areas, creates ideal ecological conditions for the ignition and the spread of fire. A fire return interval of less

  12. The flight periodicity, attack patterns, and life history of Dryocoetes confusus Swaine (Coleoptera: Curculionida: Scolytinae), the western balsam bark beetle, in north central Colorado

    Science.gov (United States)

    Jose F. Negron; John B. Popp

    2009-01-01

    Dryocoetes confusus Swaine, the western balsam bark beetle, is an important bark beetle associated with Abies lasiocarpa (Hook.) Nutt. (subalpine fir) in western North America. Little information is available on the life cycle and ecology of this insect in Colorado. In this study in north central Colorado, we examined its...

  13. Thinning balsam fir thickets with soil sterilants

    Science.gov (United States)

    Arthur C. Hart

    1961-01-01

    Under certain conditions that we do not yet fully understand, balsam fir has a tendency to form dense thickets that cause stagnation of growth. This condition is common throughout the spruce-fir region, and it presents the landowner with one of his most perplexing management problems. A typical thicket averaging 15 feet tall may contain 5,000 to 10,000 stems per acre (...

  14. Veneer recovery from Douglas-fir logs.

    Science.gov (United States)

    E.H. Clarke; A.C. Knauss

    1957-01-01

    During 1956, the Pacific Northwest Forest and Range Experiment Station made a series of six veneer-recovery studies in the Douglas-fir region of Oregon and Washington. The net volume of logs involved totaled approximately 777 M board-feet. Purpose of these studies was to determine volume recovery, by grade of veneer, from the four principal grades of Douglas-fir logs...

  15. Radial growth of grand fir and Douglas-fir 10 years after defoliation by the Douglas-fir tussock moth in the Blue Mountains outbreak.

    Science.gov (United States)

    Boyd E. Wickman

    1986-01-01

    Radial-growth recovery related to amount of tree defoliation was measured 10 years after a severe outbreak of Douglas-fir tussock moth (Orgyia pseudotsugata (McDunnough). For the period 1978-82, growth of qrand fir surpassed and was significantly greater than in the preoutbreak period, 1968-72. Douglas-fir growth during the postoutbreak period...

  16. Douglas-fir tussock moth- and Douglas-fir beetle-caused mortality in a ponderosa pine/Douglas-fir forest in the Colorado Front Range, USA

    Science.gov (United States)

    Jose F. Negron; Ann M. Lynch; Willis C. Schaupp; Vladimir Bocharnikov

    2014-01-01

    An outbreak of the Douglas-fir tussock moth, Orgyia pseudotsugata McDunnough, occurred in the South Platte River drainage on the Pike-San Isabel National Forest in the Colorado Front Range attacking Douglas-fir, Pseudotsuga menziesii (Mirb.) Franco. Stocking levels, species composition, and tree size in heavily and lightly defoliated stands were similar. Douglas-fir...

  17. The effects of land use change on carbon content in the aerial biomass of an Abies religiosa (Kunth Schltdl. et Cham. forest in central Veracruz, Mexico

    Directory of Open Access Journals (Sweden)

    M.R. Pineda Lopez

    2013-04-01

    Full Text Available Aim of study. Were analyzed patterns and dynamics of forest cover change and land use for the period 1995-2005, and estimated carbon content in biomass in a forest of fir (Abies religiosa.Area of study. Ejido El Conejo in the Cofre de Perote National Park, Veracruz, Mexico.Material and Methods. Spatial data (maps, orthophotographs were used: (UTM; GRS 80 spheroid; zone 14, datum ITRF92; units: metres. Maps for 1995 and 2005 were constructed and compared. Carbon content in the aboveground biomass of fir (Abies religiosa was estimated using an equation specific to species.Main results. After one decade, the forested area had increased slightly (0.25%. The main type of land cover change was from shrubland to forest (probability of change 0.41; the change from forestland to shrubland with trees was 0.05%, and from forest to agriculture was 0.02%. Data from 2008 confirmed that the A. religiosa forest located in the ejido is distributed in largely unconnected fragments, of which some have a high density of young trees. Estimated carbon content in the aboveground biomass (163.51 Mg ha-1 was higher than that estimated for other forests of the same species in Mexico.Research highlights. It is recommended that ecological corridors be established throughout the reforested area, in order to connect these fragments (and increase carbon sequestration and favour faunal and floral conservation. Finally, recognition should be given to the high vulnerability of A. religiosa forests to climate change, given their high degree of fragmentation and critical altitudinal limit.Key words: Aboveground biomass; carbon storage; ecological corridors; fir forest.

  18. Changes in the silver fir forest vegetation 50 years after cessation of active management

    Directory of Open Access Journals (Sweden)

    Beata Woziwoda

    2015-07-01

    Full Text Available Knowledge of the vegetation and the monitoring of its changes in preserved areas is an essential part of effective conservation policy and management. The aim of this study was to assess the effectiveness of traditional methods of conservation of silver fir forests. The study analyses the changes in the structure and species composition of a temperate forest excluded from the commercial silvicultural management for 50 years, and since then protected as a nature reserve. The study is based on a comparative analysis of phytosociological reléves made on permanent plots in 1961, 1982, 1994 and 2011. PCA and ecological indicator values were analyzed, as well as characteristic species based on an indicator value (IndVal index. Results revealed significant and dynamic changes in the forest structure and composition. The mixed coniferous-broadleaved forest with Abies alba and diverse ground flora, considered in the 1960s as valuable and worthy of conservation, was found to have been anthropogenically transformed and unstable. Significant reduction in the human impact was followed by spontaneous regeneration of oak–hornbeam forest. However, the directional process of changes in vegetation was modified by such silvicultural treatments as selective cutting of trees and gap creation, all intended for silver fir maintenance. The results show that Carpinus betulus effectively outcompeted Pinus sylvestris, Picea abies, Quercus robur and A. alba. Changes in the forest overstory and understory caused temporal changes in the habitat conditions reflected in changes in the ground vegetation composition. The proportion of light-demanding and oligotrophic species significantly decreased, while the contribution of species with a wide ecological amplitude, i.e. more shade-tolerant and nutrient-demanding – increased. The share of A. alba was reduced. Species defined in this study as most valuable, should be actively protected, or selection of conservation targets

  19. Development of synthetic GOES-R ABI aerosol products

    Science.gov (United States)

    Hoff, R. M.; Kondragunta, S.; Ciren, P.; Xu, C.; Zhang, H.; Huff, A.

    2014-09-01

    An Observing Systems Simulation Experiment (OSSE) for GOES-R Advanced Baseline Imager (ABI) aerosol products has been carried out. The generation of simulated data involves prediction of aerosol chemical composition fields at one-hour resolution and 12 km × 12 km spacing. These data are then fed to a radiative transfer model to simulate the on-orbit radiances that the GOES-R ABI will see in six channels. This allows the ABI aerosol algorithm to be tested to produce products that will be available after launch. In cooperation with a user group of 40+ state and local air quality forecasters, the system has been tested in real-time experiments where the results mimic what the forecasters will see after 2016 when GOES-R launches. Feedback from this group has allowed refinement of the web display system for the ABI aerosol products and has creatively called for new products that were not envisaged by the satellite team.

  20. 19 CFR 143.7 - Revocation of ABI participation.

    Science.gov (United States)

    2010-04-01

    ... THE TREASURY (CONTINUED) SPECIAL ENTRY PROCEDURES Automated Broker Interface § 143.7 Revocation of ABI... appeal the revocation to the Assistant Commissioner, Information and Technology, within 10 days following...

  1. Decay in white fir top-killed by Douglas-fir tussock moth.

    Science.gov (United States)

    Boyd E. Wickman; Robert F. Scharpf

    1972-01-01

    Stands heavily defoliated in 1936-37 by the Douglas-fir tussock moth, Hemerocampa pseudotsugata McD., at Mammoth Lakes, California, were studied to determine the incidence and extent of decay in top-damaged trees. This was done by dissecting the tops of trees felled during logging. Comparisons were made with white fir in a nearby logged area that was...

  2. Mineral status of plants and soil in silver fir stands of the Silesian and Żywiec Beskidy (Western Carpathians

    Directory of Open Access Journals (Sweden)

    Borgulat Jacek

    2017-01-01

    Full Text Available For last decades the Silesian and Żywiec Beskidy have been affected by different types of anthropopression. Up to the nineties of the 20th century, forests of the area were affected by a high level of air pollutants transported mainly from the Upper Silesian and Ostrava industrial regions. From 2004 intensive felling and skidding works in declining forest stands combined with their reconstruction have been carried out. Among different species silver fir has been introduced on a large scale. In the paper the results of investigation of plants and soil carried out 7 sites located in Beskidy Mountains (49°41’6”N, 19°1’48”E are presented. Contents of K, Mg, Ca and N in needles of silver fir (Abies alba Mill. and leaves of bilberry (Vaccinium myrtillus L. were determined which was accompanied by a chemical characteristics of forest topsoil from the same sites. Moreover, in both environment compartments, the concentration of S, Pb, Cd, and Zn was also determined to assess the level of anthropopression in individual sites. In general, the obtained results show relatively good mineral status of plants. Some disturbances in the ratios of elements in plants were found in sites located near the Polish and Czech border. In plants and soil in these sites an elevated level of heavy metals was found which testifies the transboundary transport of air pollutants. The bilberry seems to be a better bioindicator of heavy metal pollution than silver fir.

  3. The influence of changes in soil moisture in association with geomorphic change on the formation of a subalpine coniferous forest on Mt. Akita-Komagatake, northern Japan

    Science.gov (United States)

    Konno, A.

    2015-12-01

    The coniferous forest (largely composed of Abies mariesii) is presently the typical vegetation of the subalpine zone in Japan. Pollen analysis revealed that few A. mariesii were present during the last glacial period, and the species began to expand to the subalpine zone during the Holocene (Morita, 1992). However, on Mt. Akita-Komagatake in northern Japan, the expected predominance of A. mariesii is not extensively observed, and the predominant vegetation is instead the dwarf bamboo (Sasa kurilensis). It is unknown why the area under coniferous forest is small in this region. Therefore, I examined this issue from the perspectives of (1) distribution of vegetation, (2) geomorphology, (3) soil moisture, and (4) vegetation history. (1) Precise digital elevation model data and photographic interpretation showed that this coniferous forest was densely distributed in a flat segment considered to be formed by a landslide; (2) this landslide is thought to have occurred up to 3,699 ± 26 yr BP because a boring-core specimen from the landslide included the AK-3 tephra layer (2,300-2,800 yr BP: Wachi et al, 1997) and the radiocarbon date of the lowermost humic soil layer was 3,699 ± 26 yr BP; (3) the soil in the forest area had higher volumetric water content than that in the non-forest area; and (4) phytolith analysis revealed that the main species in the study site was initially dwarf bamboo, but coniferous forest replaced it after the Towada-a tephra (1035 cal. BP, Machida and Arai, 1992) layer fell. These results suggest that soil water conditions changed because of the formation of the flat segment by the landslide, and the coniferous forest was consequently established. However, the landslide only indirectly affected the formation of the coniferous forest, because the forest developed over several thousand years after the landslide occurred. In other words, more direct reasons for the establishment of the coniferous forest may involve changes in soil moisture. This

  4. Comparative phytosocioogical investigation of subalpine alder thickets in southwestern Alaska and the North Pacific

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — We present the first vegetation analysis of subalpine alder (Alnus viridis) thickets in southwestern Alaska. The data are primarily from mesic, hilly and mountainous...

  5. Determination of fir strengh charachteristics

    OpenAIRE

    Газизов, А. М.; Юсупов, С. А.

    2017-01-01

    Пихтовая древесина имеет наименьшую популярность в области столярных и строительных работ в связи с низкими физико-механическими свойствами. Показателем механических свойств древесины является ее прочность. Fir wood has the least popularity in the field of carpentry and construction in connection with low mechanical properties. An index of mechanical properties of wood is its durability....

  6. Soil attributes and microclimate are important drivers of initial deadwood decay in sub-alpine Norway spruce forests.

    Science.gov (United States)

    Fravolini, Giulia; Egli, Markus; Derungs, Curdin; Cherubini, Paolo; Ascher-Jenull, Judith; Gómez-Brandón, María; Bardelli, Tommaso; Tognetti, Roberto; Lombardi, Fabio; Marchetti, Marco

    2016-11-01

    Deadwood is known to significantly contribute to global terrestrial carbon stocks and carbon cycling, but its decay dynamics are still not thoroughly understood. Although the chemistry of deadwood has been studied as a function of decay stage in temperate to subalpine environments, it has generally not been related to time. We therefore studied the decay (mass of deadwood, cellulose and lignin) of equal-sized blocks of Picea abies wood in soil-mesocosms over two years in the Italian Alps. The 8 sites selected were along an altitudinal sequence, reflecting different climate zones. In addition, the effect of exposure (north- and south-facing slopes) was taken into account. The decay dynamics of the mass of deadwood, cellulose and lignin were related to soil parameters (pH, soil texture, moisture, temperature) and climatic data. The decay rate constants of Picea abies deadwood were low (on average between 0.039 and 0.040y(-1)) and of lignin close to zero (or not detectable), while cellulose reacted much faster with average decay rate constants between 0.110 and 0.117y(-1). Our field experiments showed that local scale factors, such as soil parameters and topographic properties, influenced the decay process: higher soil moisture and clay content along with a lower pH seemed to accelerate wood decay. Interestingly, air temperature negatively correlated with decay rates or positively with the amount of wood components on south-facing sites. It exerted its influence rather on moisture availability, i.e. the lower the temperature the higher the moisture availability. Topographic features were also relevant with generally slower decay processes on south-facing sites than on north-facing sites owing to the drier conditions, the higher pH and the lower weathering state of the soils (less clay minerals). This study highlights the importance of a multifactorial consideration of edaphic parameters to unravel the complex dynamics of initial wood decay. Copyright © 2016 Elsevier

  7. HOW to Identify and Manage Needlecast Diseases on Balsam Fir

    Science.gov (United States)

    Mike Albers; Jana Albers; Jane Cummings Carlson; Linda Haugen; Nancy Wenner

    1996-01-01

    Needlecast diseases are common in balsam fir stands and Christmas tree plantations in the northeastern and north central United States and in southern Ontario, Quebec, and New Brunswick. Three different needlecast fungi, Lirula nervata, Lirula mirabilis and Isthmiella faullii, cause similar disease symptoms on balsam fir. These diseases may affect other firs planted in...

  8. FIR-MMC in rantsoenen van roze-vleeskalveren

    NARCIS (Netherlands)

    Plomp, M.; Heeres-van der Tol, J.J.; Driegen, J.

    1997-01-01

    FIR-MMC is een koolstofhoudend kleimineraal. Ervaringen uit de praktijk zouden aangeven dat FIR-MMC de voederconversie kan verbeteren. Toevoegen van FIR-MMC had in dit onderzoek bij geen van de rantsoenen invloed op voeropname, groei, voederconversie en karkaskwaliteit van de kalveren.

  9. Height-Diameter Models for Mixed-Species Forests Consisting of Spruce, Fir, and Beech

    Directory of Open Access Journals (Sweden)

    Petráš Rudolf

    2014-06-01

    Full Text Available Height-diameter models define the general relationship between the tree height and diameter at each growth stage of the forest stand. This paper presents generalized height-diameter models for mixed-species forest stands consisting of Norway spruce (Picea abies Karst., Silver fir (Abies alba L., and European beech (Fagus sylvatica L. from Slovakia. The models were derived using two growth functions from the exponential family: the two-parameter Michailoff and three-parameter Korf functions. Generalized height-diameter functions must normally be constrained to pass through the mean stand diameter and height, and then the final growth model has only one or two parameters to be estimated. These “free” parameters are then expressed over the quadratic mean diameter, height and stand age and the final mathematical form of the model is obtained. The study material included 50 long-term experimental plots located in the Western Carpathians. The plots were established 40-50 years ago and have been repeatedly measured at 5 to 10-year intervals. The dataset includes 7,950 height measurements of spruce, 21,661 of fir and 5,794 of beech. As many as 9 regression models were derived for each species. Although the “goodness of fit” of all models showed that they were generally well suited for the data, the best results were obtained for silver fir. The coefficient of determination ranged from 0.946 to 0.948, RMSE (m was in the interval 1.94-1.97 and the bias (m was -0.031 to 0.063. Although slightly imprecise parameter estimation was established for spruce, the estimations of the regression parameters obtained for beech were quite less precise. The coefficient of determination for beech was 0.854-0.860, RMSE (m 2.67-2.72, and the bias (m ranged from -0.144 to -0.056. The majority of models using Korf’s formula produced slightly better estimations than Michailoff’s, and it proved immaterial which estimated parameter was fixed and which parameters

  10. Plantas asociadas a los bosques de Abies guatemalensis (Pinaceae del occidente de Guatemala Plants associated to Abies guatemalensis (Pinaceae forests in Western Guatemala

    Directory of Open Access Journals (Sweden)

    José Vicente Martínez Arévalo

    2013-03-01

    Full Text Available Hay una carencia de información detallada sobre la composición y estructura de las comunidades montanas guatemaltecas. El objetivo del estudio fue contribuir al conocimiento de la flora de bosques de abeto (Abies guatemalensis, para esto se hizo el levantamiento florístico en bosques de abeto del occidente de Guatemala. Se encontraron 119 especies, 92 géneros, 50 familias en cuatro divisiones. Las familias más numerosas fueron: Asteraceae, Poaceae, Rosaceae, Lamiaceae, Apiaceae y Solanaceae y los géneros más abundantes Salvia, Alchemilla y Bidens. Las especies se ubicaron en cuatro estratos, 33 en el herbáceo inferior, 49 en el herbáceo superior, 30 en arbustos y siete en árboles. Se hace énfasis en la contribución del estudio al conocimiento de la flora de bosques de A. guatemalensis y la necesidad de otros similares en los demás bosques de esta especie, que sirva para fomentar su conocimiento y conservación. Se consideraron seis grupos de distribución geográfica, el principal es del centro de México a Centroamérica con 67% de especies. Se realiza una comparación fitogeográfica y de composición florística, con otras áreas de Abies de Guatemala y México. Se propone que a pesar de haber familias y géneros comunes, que proporcionan la estructura general entre los bosques de abeto, se deben considerar las particularidades florísticas de cada área, en el manejo y conservación influidas por suelo, latitud y microclima.The fragments of Abies guatemalensis forests in Western Guatemala are the reservoirs of plant species that have been poorly documented, missing the opportunity to expand the knowledge of the local flora and its use in conservation planning. To assess this, a floristic study was done in areas between 2 950-3 360masl in Western Guatemala between 2010-2011. Ten locations were sampled: in each a 500m² plot was surveyed, and plants were classified in four strata by plant height (0.05-30m. A total of 119 species

  11. System Verilog modelling of FIR filters

    Science.gov (United States)

    Pawlus, Łukasz; Wegrzyn, Marek

    2006-02-01

    In the paper modelling of FIR filters by means of Verilog and SystemVerilog is presented. Hardware/software co-design approach for such systems is applied in the presented design. As a final technology for a FIR filters system implementation, a FPSLIC device is considered. Filters system demonstrates example methods of communication between FPGA and AVR microcontroller in a FPSLIC structure, i.e. the communication through SRAM memory, addressing lines, data bus, interrupts. It also demonstrates how to serve peripheral elements in FPSLIC device by means of DPI interface. FIR filters model contains also interface which implements a FPSLIC cache logic and gives opportunity to a dynamical reconfiguration of FPGA in a FPSLIC structure.

  12. Douglas-Fir Tussock Moth- and Douglas-Fir Beetle-Caused Mortality in a Ponderosa Pine/Douglas-Fir Forest in the Colorado Front Range, USA

    Directory of Open Access Journals (Sweden)

    José F. Negrón

    2014-12-01

    Full Text Available An outbreak of the Douglas-fir tussock moth, Orgyia pseudotsugata McDunnough, occurred in the South Platte River drainage on the Pike-San Isabel National Forest in the Colorado Front Range attacking Douglas-fir, Pseudotsuga menziesii (Mirb. Franco. Stocking levels, species composition, and tree size in heavily and lightly defoliated stands were similar. Douglas-fir tussock moth defoliation resulted in significant Douglas-fir mortality in the heavily defoliated stands, leading to a change in dominance to ponderosa pine, Pinus ponderosa Lawson. Douglas-fir beetle, Dendroctonus pseudotsuqae Hopkins, populations increased following the defoliation event but caused less mortality, and did not differ between heavily and lightly defoliated stands. Douglas-fir tussock moth-related mortality was greatest in trees less than 15 cm dbh (diameter at 1.4 m above the ground that grew in suppressed and intermediate canopy positions. Douglas-fir beetle-related mortality was greatest in trees larger than 15 cm dbh that grew in the dominant and co-dominant crown positions. Although both insects utilize Douglas-fir as its primary host, stand response to infestation is different. The extensive outbreak of the Douglas-fir tussock moth followed by Douglas-fir beetle activity may be associated with a legacy of increased host type growing in overstocked conditions as a result of fire exclusion.

  13. Some effects of douglas fir terpenes on certain microorganisms.

    Science.gov (United States)

    Andrews, R E; Parks, L W; Spence, K D

    1980-08-01

    The Douglas fir terpene alpha-pinene was shown to inhibit the growth of a variety of bacteria and a yeast. Other terpenes of the Douglas fir, including limonene, camphene, and isobornyl acetate, were also inhibitory to Bacillus thuringiensis. All terpenes were inhibitory at concentrations normally present in the fir needle diet of Douglas fir tussock moth larvae. The presence of such terpenes in the diet of these insects was found to strongly influence the infectivity of B. thuringiensis spores for the Douglas fir tussock moth larvae. The terpene alpha-pinene destroyed the cellular integrity and modified mitochondrial activity in certain microorganisms.

  14. Species Distribution Modeling between Abies koreana and Abies nephrolepis According to the RCP Scenarios in South Korea

    Science.gov (United States)

    Lee, S. G.; Kim, I. S.; Lee, W. K.; Kwon, H. J.; Byeon, J. G.; Yun, J. E.

    2016-12-01

    Vulnerable plant that includes species in crisis of extinction is shown by environment, competition between various species. The climate is one of the main factor that affect to the plant distribution. The most essential particular to make species distribution model is distribution data, and secondly environmental factors. 179 taxon plant classified according to the distribution, it consist of characteristic and regional distribution criteria. In case of climate data, 1960-1990 period made by World Clim Data is applied which has 0.86㎢ spatial resolution. It separates temperature and precipitation factor. To predict potential distribution, Maxent(Maximum Entropy Model) is applied that is widely known as suitable model in case of presence distributional data only. Among the target species, Abies koreana and Abies nephrolepis have no clearly key to identify, so their differences of distribution and environmental fator information could act useful. In order to know the distinction according to the classifying species, Abies koreana and Abies nephrolepis are typically selected. Abies koreana distributes at high mountain in Southern part of Korean Peninsula, otherwise Abies nephrolepis is at high mountain in from Middle latitude(over the 37°) in South Korea. These species has been the center of controversy recently, because the classification key of these species is not scientifically clear yet. In this perspective these species predicted potential distribution depend on whether these are same species or not. In the result of considering these species are same, entire predicted distribution area is wider, especially Jiri-san mountain(latitude : 35°) which is the highest latitude of the Abies koreana distributed point. On the other side, result of considering different species is shown that Abies koreana could climatically survive near by Soerak-san mountain(latitude : 37°), but Abies nephrolepis could not live in Halla-san mountan(33°) in Jeju-island which is the

  15. The past ecology of Abies alba provides new perspectives on future responses of silver fir forests to global warming

    NARCIS (Netherlands)

    Tinner, W.; Colombaroli, D.; Heiri, O.M.|info:eu-repo/dai/nl/30484036X; Henne, P.D.; Steinacher, M.; Untenecker, J.; Vescovi, E.; Allen, J.R.M.; Carraro, G.; Conodera, M.; Joos, F.; Lotter, A.F.; Luterbacher, J.; Samartin, S.; Valsecchi, V.|info:eu-repo/dai/nl/314038779

    2013-01-01

    Paleoecology can provide valuable insights into the ecology of species that complement observation and experiment-based assessments of climate impact dynamics. New paleoecological records (e.g., pollen, macrofossils) from the Italian Peninsula suggest a much wider climatic niche of the important

  16. Tall oil precursors of Douglas fir

    Science.gov (United States)

    Daniel O. Foster; Duane F. Zinkel; Anthony H. Conner

    1980-01-01

    The sapwood and heartwood extractives of Douglas fir [Pseudotsuga menziesii (Mirb.) Franco] and the tall oil in the kraft black liquor were characterized. On pulping, isomerization and conversion of conjugated resin acids to dehydroabietic acid was observed. Recovery of both fatty and resin acids from pulping was lower than predicted from the extractive composition....

  17. Landscape-scale effects of fire severity on mixed-conifer and red fir forest structure in Yosemite National Park

    Science.gov (United States)

    Kane, Van R.; Lutz, James A.; Roberts, Susan L.; Smith, Douglas F.; McGaughey, Robert J.; Povak, Nicholas A.; Brooks, Matthew L.

    2013-01-01

    While fire shapes the structure of forests and acts as a keystone process, the details of how fire modifies forest structure have been difficult to evaluate because of the complexity of interactions between fires and forests. We studied this relationship across 69.2 km2 of Yosemite National Park, USA, that was subject to 32 fires ⩾40 ha between 1984 and 2010. Forests types included ponderosa pine (Pinus ponderosa), white fir-sugar pine (Abies concolor/Pinus lambertiana), and red fir (Abies magnifica). We estimated and stratified burned area by fire severity using the Landsat-derived Relativized differenced Normalized Burn Ratio (RdNBR). Airborne LiDAR data, acquired in July 2010, measured the vertical and horizontal structure of canopy material and landscape patterning of canopy patches and gaps. Increasing fire severity changed structure at the scale of fire severity patches, the arrangement of canopy patches and gaps within fire severity patches, and vertically within tree clumps. Each forest type showed an individual trajectory of structural change with increasing fire severity. As a result, the relationship between estimates of fire severity such as RdNBR and actual changes appears to vary among forest types. We found three arrangements of canopy patches and gaps associated with different fire severities: canopy-gap arrangements in which gaps were enclosed in otherwise continuous canopy (typically unburned and low fire severities); patch-gap arrangements in which tree clumps and gaps alternated and neither dominated (typically moderate fire severity); and open-patch arrangements in which trees were scattered across open areas (typically high fire severity). Compared to stands outside fire perimeters, increasing fire severity generally resulted first in loss of canopy cover in lower height strata and increased number and size of gaps, then in loss of canopy cover in higher height strata, and eventually the transition to open areas with few or no trees. However

  18. Seasonal distribution of phytoplankton in the Aby lagoon system ...

    African Journals Online (AJOL)

    Seasonal variability of phytoplankton species composition, abundance and physical and chemical factors influencing phytoplankton dynamics were investigated in the Aby lagoon system, south-eastern Ivory Coast, covering the main climatic seasons in 2006–2007. Seasonal and spatial variability of nutrient concentrations ...

  19. The effects of land use change on carbon content in the aerial biomass of an Abies religiosa (Kunth Schltdl. et Cham.) forest in central Veracruz, Mexico

    Energy Technology Data Exchange (ETDEWEB)

    Pineda-Lopez, M. R.; Sanchez-Velasquez, L. R.; Vazquez-Dominguez, G.; Rojo-Alboreca, A.

    2013-05-01

    Aim of study.) Were analyzed patterns and dynamics of forest cover change and land use for the period 1995-2005, and estimated carbon content in biomass in a forest of fir (Abies religiosa). Area of study. Ejido El Conejo in the Cofre de Perote National Park, Veracruz, Mexico. Material and Methods. Spatial data (maps, ortho photographs) were used: (UTM); GRS 80 spheroid; zone 14, datum ITRF92; units: metres. Maps for 1995 and 2005 were constructed and compared. Carbon content in the aboveground biomass of fir (Abies religiosa) was estimated using an equation specific to species. Main results. After one decade, the forested area had increased slightly (0.25%). The main type of land cover change was from shrubland to forest (probability of change 0.41); the change from forestland to shrubland with trees was 0.05%, and from forest to agriculture was 0.02%. Data from 2008 confirmed that the A. religiosa forest located in the ejido is distributed in largely unconnected fragments, of which some have a high density of young trees. Estimated carbon content in the aboveground biomass (163.51 Mg ha-1) was higher than that estimated for other forests of the same species in Mexico. Research highlights. It is recommended that ecological corridors be established throughout the reforested area, in order to connect these fragments (and increase carbon sequestration) and favour faunal and floral conservation. Finally, recognition should be given to the high vulnerability of A. religiosa forests to climate change, given their high degree of fragmentation and critical altitudinal limit. (Author) 55 refs.

  20. Evaluation of chemical controls and entomopathogenic nematodes for control of Phyllophaga white grubs in a Fraser fir production field.

    Science.gov (United States)

    Liesch, P J; Williamson, R C

    2010-12-01

    The results of 2 yr of field trials evaluating various chemical and biological controls of Phyllophaga anxia (LeConte) white grubs in a Fraser fir [Abies fraseri (Pursh) Poir] Christmas tree production field are reported here. Chemical insecticides evaluated included bifenthrin, chlorantraniliprole, thiamethoxam, and time-released imidacloprid tablets (Coretect, Bayer CropScience, Research Triangle Park, NC). Entomopathogenic nematodes evaluated included Heterorhabditis bacteriophora (Poinar) and Steinernema carpocapsae (Weiser). Overall, the chemical controls provided the best root protection and grub control. Targeted treatments of an insecticide in the root zone may provide adequate tree protection and can be a way to reduce overall insecticide input compared with banded sprays. The nematode H. bacteriophora provided limited root protection and grub control, whereas S. carpocapsae did not provide effective control. Differences in efficacy and persistence of the two entomopathogenic nematode species can be attributed to the biology and environmental preferences of these organisms.

  1. A SYNCHRONIZED FIR/VUV LIGHT SOURCE AT JEFFERSON LAB

    Energy Technology Data Exchange (ETDEWEB)

    Stephen Benson, David Douglas, George Neil, Michelle D. Shinn, Gwyn Williams

    2012-07-01

    We describe a dual free-electron laser (FEL) configuration on the UV Demo FEL at Jefferson Lab that allows simultaneous lasing at FIR/THz and UV wavelengths. The FIR/THz source would be an FEL oscillator with a short wiggler providing nearly diffraction-limited pulses with pulse energy exceeding 50 microJoules. The FIR source would use the exhaust beam from a UVFEL. The coherent harmonics in the VUV from the UVFEL are out-coupled through a hole. The FIR source uses a shorter resonator with either hole or edge coupling to provide very high power FIR pulses. Simulations indicate excel-lent spectral brightness in the FIR region with over 100 W/cm-1 output.

  2. Transmission of a Gammabaculovirus within Cohorts of Balsam Fir Sawfly (Neodiprion abietis Larvae

    Directory of Open Access Journals (Sweden)

    Christopher J. Lucarotti

    2012-10-01

    Full Text Available Nucleopolyhedroviruses (NPV: Gammabaculovirus: Baculoviridae of diprionid sawflies (Diprionidae: Hymenoptera are highly host specific and only infect the midgut epithelium. While still alive, infected sawfly larvae excrete NPV-laden diarrhea that contaminates food sources. The diarrhea can then be consumed by conspecific larvae, resulting in rapid horizontal transmission of the virus. To better understand the efficacy of Gammabaculovirus-based biological control products, the horizontal spread of such a virus (NeabNPV within cohorts of balsam fir sawfly (Neodiprion abietis larvae was studied by introducing NeabNPV-treated larvae into single-cohort groups at densities similar to those observed during the increasing (field study and peak (laboratory study phases of an outbreak. In field studies (~200 N. abietis larvae/m2 of balsam fir (Abies balsamea foliage, NeabNPV-induced mortality increased positively in a density-dependent manner, from 23% (in control groups to 51% with the addition of one first-instar NeabNPV-treated larva, to 84% with 10 first–instar-treated larvae. Mortality was 60% and 63% when one or 10 NeabNPV-treated third-instar larva(e, respectively, were introduced into groups. Slightly higher levels of NeabNPV-induced mortality occurring when NeabNPV-treated larvae were introduced into first- rather than third-instar cohorts suggests that early instars are more susceptible to the virus. In the laboratory (~1330 N. abietis larvae/ m2 of foliage, NeabNPV-caused mortality increased from 20% in control groups to over 80% with the introduction of one, five or 10 NeabNPV-treated larvae into treatment groups of first-instar larvae.

  3. Silver fir and Douglas fir are more tolerant to extreme droughts than Norway spruce in south-western Germany

    Czech Academy of Sciences Publication Activity Database

    Vitali, V.; Büntgen, Ulf; Bauhus, J.

    2017-01-01

    Roč. 23, č. 12 (2017), s. 5108-5119 ISSN 1354-1013 R&D Projects: GA MŠk(CZ) LO1415 Institutional support: RVO:86652079 Keywords : temperate forest trees * picea-abies karst. * climate- change * water relations * vosges mountains * growth-patterns * species stands * scots pine * alba * productivity * Abies alba * Central Europe * climate change * dendroecology * drought tolerance * forest management * Picea abies * Pseudotsuga menziesii Subject RIV: EH - Ecology, Behaviour Impact factor: 8.502, year: 2016

  4. Nuclear and chloroplast microsatellite analysis of Abies sachalinensis regeneration on fallen logs in a subboreal forest in Hokkaido, Japan.

    Science.gov (United States)

    Lian, Chunlan; Goto, Susumu; Kubo, Takuya; Takahashi, Yasuo; Nakagawa, Masahiko; Hogetsu, Taizo

    2008-06-01

    Fallen logs are the main regeneration sites for Abies sachalinensis (Sachalin fir) in subboreal forests in Japan. We surveyed the spatial genetic structure of different demographic stages in a 4.29-ha natural population of A. sachalinensis. Genetic structure was significant at short distances throughout all stages in this wind-dispersed conifer. To evaluate the effects of fallen-log-dependent recruitment on demography and spatial genetic structure, we conducted parentage analysis of offspring with highly polymorphic nuclear simple sequence repeat and chloroplast simple sequence repeat markers, and developed a new hierarchical Bayesian model to estimate the effects of mother trees and fallen logs on seed dispersal and offspring recruitment. Combined application of nuclear and chloroplast simple sequence repeat markers allowed us to unambiguously identify mother trees of most offspring (> 90%). Female reproductive success was extremely skewed; a few adults produced most of the offspring on fallen logs. Limited distance of effective dispersal and recruitment was seen in the parentage analysis and modelling estimation. These recruitment characters of A. sachalinensis, with a fallen-log-dependent recruitment process, may result in significant genetic structure in early demographic stages.

  5. Adaptive Evolution and Demographic History of Norway Spruce (Picea Abies)

    OpenAIRE

    Källman, Thomas

    2009-01-01

    One of the major challenges in evolutionary biology is to determine the genetic basis of adaptive variation. In Norway spruce (Picea abies) the timing of bud set shows a very strong latitudinal cline despite a very low genetic differentiation between populations. The timing of bud set in Norway spruce is under strong genetic control and triggered by changes in photoperiod, but no genes controlling this response have so far been described. In this thesis we used a combination of functional stu...

  6. Validations of GOES-R ABI Aerosol Products

    Science.gov (United States)

    Ciren, P.; Laszlo, I.; Kondragunta, S.; Liu, H.; Zhou, M.

    2009-12-01

    High temporal resolution observations from geostationary platform provide unique benefits for monitoring the development of air pollution event. Especially, observations of multi-visible channels in the future GOES-R ABI provide more capability for characterizing air quality. GOES-R ABI Air Quality products include Aerosol detection product and suspended matter/AOD product. The first one is to detect the presence of smoke/dust; the second one is to quantify the amount of particles in the air in terms of light attenuation, and consequently inferred concentration of particles. In this presentation, we focus on the demonstration of the performance of the developed products through a comprehensive validation process. In the current pre-launch stage, MODIS radiances at bands similar to those of ABI are used as proxy. As for the suspended matter/AOD product, truth data include observations from ground-based instruments at the AERONET stations, MODIS collection 5 aerosol products, and aerosol product from CALIPSO (Cloud-Aerosol Lidar and Infrared Pathfinder Satellite Observation). For aerosol detection product, truth data include MODIS RGB images and CALIPO Vertical Feature Mask Products. Through comparisons with global observations from MODIS, point observations from AERONET, and narrow-track observations from CALIPSO, accuracy and precision (for AOD only) are evaluated for both products. In addition, a validation system which includes not only the evaluation with historical data, but also monitoring the products qualities with near-real time observations, is presented.

  7. Linkages between grazing history and herbivore exclusion on decomposition rates in mineral soils of subalpine grasslands

    Science.gov (United States)

    Alan G. Haynes; Martin Schutz; Nina Buchmann; Deborah S. Page-Dumroese; Matt D. Busse; Anita C. Risch

    2014-01-01

    Herbivore-driven changes to soil properties can influence the decomposition rate of organic material and therefore soil carbon cycling within grassland ecosystems. We investigated how aboveground foraging mammalian and invertebrate herbivores affect mineral soil decomposition rates and associated soil properties in two subalpine vegetation types (shortgrass and tall-...

  8. Human disturbance provides foraging opportunities for birds in primary subalpine forest

    DEFF Research Database (Denmark)

    DuBay, Shane G.; Hart Reeve, Andrew; Wu, Yongjie

    2017-01-01

    to species that naturally occur in edge, open, or disturbed habitats. With observations and experiments we provide evidence of insectivorous birds exploiting human disturbance in primary subalpine forest in the mountains of southern China, displaying behavioral flexibility to gain novel foraging...

  9. Net primary productivity of subalpine meadows in Yosemite National Park in relation to climate variability

    Science.gov (United States)

    Peggy E. Moore; Jan W. van Wagtendonk; Julie L. Yee; Mitchel P. McClaran; David N. Cole; Neil K. McDougald; Matthew L. Brooks

    2013-01-01

    Subalpine meadows are some of the most ecologically important components of mountain landscapes, and primary productivity is important to the maintenance of meadow functions. Understanding how changes in primary productivity are associated with variability in moisture and temperature will become increasingly important with current and anticipated changes in climate....

  10. Drought-driven disturbance history characterizes a southern Rocky Mountain subalpine forest

    Science.gov (United States)

    R. Justin DeRose; James N. Long

    2012-01-01

    The view that subalpine forest vegetation dynamics in western North America are "driven" by a particular disturbance type (i.e., fire) has shaped our understanding of their disturbance regimes. In the wake of a recent (1990s) landscape- extent spruce beetle (Dendroctonus rufipennis Kirby) outbreak in the southern Rocky Mountains, we re-examined the temporal...

  11. Water use patterns of three species in subalpine forest, Southwest China: the deuterium isotope approach

    Science.gov (United States)

    Qing Xu; Harbin Li; Jiquan Chen; Jiquan Cheng; Xiaoli Cheng; Shirong Liu; Shuqing An

    2011-01-01

    Determination of water sources of plant species in a community is critical for understanding the hydrological processes and their importance in ecosystem functions. Such partitioning of plant xylem water into specific sources (i.e. precipitation, groundwater) can be achieved by analyzing deuterium isotopic composition (δD) values for source waters. A subalpine dark...

  12. Comparison of the abundance and composition of litter fauna in tropical and subalpine forests

    Science.gov (United States)

    G. Gonzalez; T.R. Seastedt

    2000-01-01

    In this study, we quantify the abundance and composition of the litter fauna in dry and wet tropical forests and north- and south-facing subalpine forests. We used the same litter species contained in litterbags across study sites to standardize for substrate conditions, and a single method of fauna extraction from the litter (Tullgren method). Fauna densities were...

  13. Shelterwood regeneration of true fir: conclusion after 8 years

    Science.gov (United States)

    Robert J. Laacke; Jeanne H. Tomascheski

    1986-01-01

    Shelterwood cuttings on Swain Mountain Experimental Forest were measured to determine performance six to eight years after the shelterwood cutting and before shelterwood removal. Use of appropriate selecting criteria minimized windthrow of seed trees. Regeneration remained red fir, even where the major seed source was white fir. Density of seed trees may affect...

  14. Balsam Fir Wooly Adlegid Survey on CVNWR 2009

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — On July 17, 2009 Amber Myers and I conducted a survey to check the status of Balsam Fir Wooly Adelgid on one hundred Balsam Fir Trees off of Freeland Trail. We...

  15. Financial analysis of pruning coast Douglas-fir.

    Science.gov (United States)

    Roger D. Fight; James M. Cahlll; Thomas D. Fahey; Thomas A. Snellgrove

    1987-01-01

    Pruning of coast Douglas-fir was evaluated; recent product recovery information for pruned and unpruned logs for both sawn and peeled products was used. Dimensions of pruned and unpruned trees were simulated with the Douglas-fir stand simulator (DFSIM). Results are presented for a range of sites, ages at time of pruning, ages at time of harvest, product prices, and...

  16. First report of Phytophthora ramorum infecting grand fir in California

    Science.gov (United States)

    K.L. Riley; G.A. Chastagner

    2011-01-01

    Phytophthora ramorum was detected on grand fir in 2003 and 2005 in a Christmas tree plantation near Los Gatos, CA, in association with infected California bay laurel. Isolates derived from stem lesions were used to inoculate grand fir seedlings in two tests. Isolations from lesions on inoculated plants were positive for P. ramorum...

  17. Mortality and growth reduction of white fir following defoliation by the Douglas-fir tussock moth

    Science.gov (United States)

    Boyd E. Wickman

    1963-01-01

    In 5 years after a 1954-56 outbreak of Hemerocampa pseudotsugata in Calaveras and Tuolumne Counties, California, 20 percent of the merchantable white fir, or 11,071 board feet per acre, died in heavily defoliated stands. Another 1,113 board feet per acre was lost owing to radial growth reductions in partly defoliated trees; 12 percent of these trees...

  18. Human-Related Forest Fires in the Subalpine Belt of the Spanish Pyrenees

    Science.gov (United States)

    Sanjuán, Yasmina; María García-Ruiz, José; Beguería, Santiago; Serrano-Muela, María Pilar; González-Sampériz, Penélope; Valero-Garcés, Blas; Arnáez, José

    2014-05-01

    The subalpine belt of the Central Pyrenees ranges approximately between 1700 and 2200 m a.s.l. This area should be covered with dense forests of Pinus sylvestris and P. uncinata, with increasingly open formations towards the upper forest limit. At present, most of the subalpine belt is occupied with grasslands due to human-induced deforestation for enlarging the area occupied by summer pastures. Two are the most important scientific problems related to deforestation of the subalpine belt: (i) the timing of deforestation, and (ii) the geomorphic consequences of a sudden substitution of forests by grasslands. Up to now, intense deforestation is clearly recorded in regional palaeoenvironmental sequences since the Middle Ages and, traditionally, this practice was usually attributed to large fires with the purpose of balance the winter and summer pasture resources. Nevertheless, the presence of abundant remnants of prehistoric monuments (dolmens, cromlechs, tumulus) in the subalpine belt induced to think in a previous seasonal presence of human populations, most probably practicing some primitive type of transhumance. This would only be possible if part of the subalpine forests would be burnt to allow a limited expansion of grasslands, despite the consequences in the landscape of this kind of practices were not permanent in time. We present here new dates of fire occurrence from charcoal obtained from soils in the hillslopes and from lacustrine sediments. Two periods of human-induced fires have been identified: (i) between 2500 and 2000 cal. yr BP, and (ii) between 1100 and 900 cal yr BP. The consequences of deforestation can be easily observed in the landscape, particularly shallow landslide activity, gelifluction, solifluction and the rapid development of parallel incisions in the steepest slopes.

  19. Manipulation of subalpine and alpine microclimate in the Alpine Treeline Warming Experiment

    Science.gov (United States)

    Kueppers, L. M.; Moyes, A. B.; Ferrenberg, S. M.; Christianson, D. S.; Castanha, C.; Germino, M. J.

    2011-12-01

    To experimentally test model projections of subalpine tree species' uphill migration with climate change, we have established the Alpine Treeline Warming Experiment at Niwot Ridge, CO. Common gardens subject to full factorial warming and watering experiments are replicated across three sites: near the lower limit of subalpine forest, within the alpine-treeline ecotone, and in the alpine tundra, beyond the current elevation ranges of the species. In 2010, differences in ambient climate among the three sites included 5.1° C greater growing-season air temperature and 0.5 kPa greater vapor pressure deficit in the lowest compared to the upper two sites. The lower subalpine site also experienced lower soil moisture compared to the upper two sites. Snowmelt date varied substantially between sites, with the longest snow-free period in the lower subalpine site and the shortest in the treeline site. In all sites, we observed advances in the timing of snowmelt in heated relative to control plots. The warming treatment also raised 5 cm soil temperatures by 3° C at the lower subalpine site, and by 1° C in the upper two sites, averaged over the growing season. More substantial wind in the alpine diminished the heating effect through sensible heat loss. Seasonal average volumetric soil moisture at 5-10 cm did not vary strongly among treatments even though seedling survival and gas exchange data suggest that water additions alleviated drought stress in some plots. These preliminary findings for identical warming and watering treatments across our three high mountain sites suggest that microclimate responses vary with radiation environment, patterns of snow accumulation, and wind speed. Some of these differences are realistic for a future warmer world, while others are artifacts of the experimental approach. Microclimate differences in 2011 reflect modified heating methods and a different spring hydroclimate (later snow accumulation and melt), highlighting the importance of

  20. A Comparison of Infrared Gas Analyzers Above a Subalpine Forest

    Science.gov (United States)

    Burns, S. P.; Metzger, S.; Blanken, P.; Burba, G. G.; Swiatek, E.; Li, J.; Conrad, B.

    2014-12-01

    Infrared gas analyzers (IRGAs) are a key component in theeddy-covariance measurement of water vapor and carbon dioxide exchangebetween the surface and atmosphere. Historically, closed-path IRGAshave been used for the fast (> 10 Hz) measurement of atmospheric H2Oand CO2. In order to use them in the field, these IRGAs were typicallyhoused in temperature-controlled enclosures or buildings that weretens of meters away from the measurement location. This necessitatedthe use of long tubing and pumps to bring the air sample to the IRGAcell. Attenuation of H2O and CO2 fluctuations within the tubing was apersistent problem with such a setup, especially for H2O. As analternative, open-path IRGAs have frequently been utilized, but thekey trade-offs with the open-path design are: (i) precipitation anddew-related data gaps, and (ii) the need to account for WPL densityeffects. Over the past five years a new type of closed-path IRGA hasemerged which is weather-proof, compact, and low-maintenance. Becauseof its small size, short intake tubing can be used, which places thesampling cell close to the sonic anemometer and reduces high frequencysignal loss. Two such IRGAs are the LI-COR LI-7200 and the CampbellScientific EC155, which is part of the CPEC200 eddy covariance system.The Niwot Ridge AmeriFlux tower has used a LI-COR LI-6262 IRGA tomeasure CO2 fluxes above a subalpine forest since November, 1998.Starting in summer 2013, a LI-7200 (along with an open-path LI-7500)were deployed at 21.5 m on the AmeriFlux tower. In Fall 2013, aEC155/CPEC200 was added so that a side-by-side comparison between allfour IRGAs was possible. The preliminary results presented in ourstudy compare the CO2 and H2O mean and variance measured by each IRGA,the vertical wind statistics from three side-by-side sonicanemometers, as well as the corresponding spectra and cospectra fromthese sensors as well as other important aspects of systemperformance.

  1. Tree growth in thinned and unthinned White fir stands 20 years after a Douglas-fir tussock moth outbreak.

    Science.gov (United States)

    Boyd E. Wickman

    1988-01-01

    Twenty-year postoutbreak growth was compared in thinned and unthinned, severely defoliated stands. Basal area of unthinned white fir has declined 37 percent and pine basal area has increased 32 percent since 1964. The stand thinned in 1960 has the lowest basal area in the study area, but the greatest tree growth before and after the outbreak. All defoliated fir are...

  2. Climate-Induced Mortality of Siberian Pine and Fir in the Lake Baikal Watershed, Siberia

    Science.gov (United States)

    Kharuk, Viacheslav I.; Im, Sergei T.; Petrova, IIya A.; Golyukov, Alexei S.; Ranson, Kenneth J.; Yagunov, Mikhail N.

    2016-01-01

    Siberian pine (Pinus sibirica) and fir (Abies sibirica) (so called "dark needle conifers", DNC) showed decreased radial growth increment within the Lake Baikal watershed since the 1980s with increasing mortality recorded since the year 2000. Tree ring width was strongly correlated with vapor pressure deficit, aridity and root zone moisture. Water stress from droughts made trees more susceptible to insect attacks causing mortality in about 10% of DNC stands within the Lake Baikal watershed. Within Siberia DNC mortality increased in the southern part of the DNC range. Biogeographically, tree mortality was located within the DNC - forest-steppes transition. Tree mortality was significantly correlated with drought and soil moisture anomalies. Within the interior of the DNC range mortality occurred within relief features with high water stress risk (i.e., steep convex south facing slopes with shallow well-drained soils). In general, DNC mortality in Siberia was induced by increased aridity and severe drought (inciting factors) in synergy with biotic attacks (contributing factor). In future climate scenarios with predicted increase in aridity DNC could be eliminated from the southern part of its current range and will be replaced by drought-resistant conifers and broadleaf species (e.g., Larix sibirica, Pinus silvestris, and Betula pubescence).

  3. Activation and Transfer of the Chromosomal Phage Resistance Mechanism AbiV in Lactococcus lactis

    DEFF Research Database (Denmark)

    Haaber, J.; Moineau, S.; Hammer, Karin

    2009-01-01

    AbiV is a chromosomally encoded phage resistance mechanism that is silent in the wild-type phage-sensitive strain Lactococcus lactis subsp. cremoris MG1363. Spontaneous phage-resistant mutants of L. lactis MG1363 were analyzed by reverse transcriptase PCR and shown to express AbiV. This expression...... was related to a reorganization in the upstream region of abiV. Transfer of abiV between two lactococcal strains, most likely by conjugation, was also demonstrated. To our knowledge, this is the first report of natural transfer of a chromosomally encoded phage resistance mechanism....

  4. Effect of antibiotic ceftriaxone on elimination of ABI and GV3101 strains of Agrobacterium tumefaciens

    Directory of Open Access Journals (Sweden)

    Gorbatyuk I. R.

    2015-12-01

    Full Text Available Aim. To find out, at which concentration the antibiotic ceftriaxone of β-lactam group causes the elimination of ABI and GV3101 strains of Agrobacterium tumefaciens. Methods. The disc diffusion method. Results. Antibiotic ceftriaxone was used for the cell elimination of the Agrobacterium tumefaciens ABI strain for the first time. The same zones of inhibition were observed when using the 400 mg/l ceftriaxone and 500 mg/l cefotaxime solutions for both Agrobacterium strains (ABI and GV3101 studied. Conclusions. Ceftriaxone inhibits the Agrobacterium growth more effectively than cefotaxime. The ceftriaxone concentration for elimination of ABI and GV3101 Agrobacterium tumefaciens strains is 400 mg/l.

  5. Terpenoids with anti-inflammatory activity from Abies chensiensis.

    Science.gov (United States)

    Zhao, Qian-Qian; Wang, Shu-Fang; Li, Ya; Song, Qiu-Yan; Gao, Kun

    2016-06-01

    The phytochemical investigation of Abies chensiensis led to the isolation and identification of nine new compounds including eight triterpenoids (1-8) and a new abietane-type diterpene (9), along with three known compounds (10-12). The absolute configuration of 9 was assigned by X-ray diffraction analysis. Compounds 1-11 were evaluated for the anti-inflammatory activity. Among the tested compounds, 1, 2, 5 and 6 exhibited potent inhibitory activity with IC50 values of 15.97, 18.73, 20.18 and 10.97μM, respectively. Copyright © 2016 Elsevier B.V. All rights reserved.

  6. Cytokinin profiles in the conifer tree Abies nordmanniana

    DEFF Research Database (Denmark)

    Rasmussen, Hanne Nina; Veierskov, Bjarke; Hansen-Møller, Jens

    2009-01-01

    Abstract  Conifer trees are routinely manipulated hormonally to increase flowering, branching, or adjust crown shape for production purposes. This survey of internal cytokinin levels provides a background for such treatments in Abies nordmanniana, a tree of great economic interest. Reference points...... in the crown and root system were sampled destructively in 4- and 6-year-old trees and analyzed for a range of cytokinins by LC-MS/MS. No seasonal patterns were detected in the root samples, and a major portion of cytokinin was in conjugated forms. Dramatic and consistent seasonal changes occurred in the crown...

  7. Temporal dynamics of abiotic and biotic factors on leaf litter of three plant species in relation to decomposition rate along a subalpine elevation gradient.

    Directory of Open Access Journals (Sweden)

    Jianxiao Zhu

    Full Text Available Relationships between abiotic (soil temperature and number of freeze-thaw cycles or biotic factors (chemical elements, microbial biomass, extracellular enzymes, and decomposer communities in litter and litter decomposition rates were investigated over two years in subalpine forests close to the Qinghai-Tibet Plateau in China. Litterbags with senescent birch, fir, and spruce leaves were placed on the forest floor at 2,704 m, 3,023 m, 3,298 m, and 3,582 m elevation. Results showed that the decomposition rate positively correlated with soil mean temperature during the plant growing season, and with the number of soil freeze-thaw cycles during the winter. Concentrations of soluble nitrogen (N, phosphorus (P and potassium (K had positive effects but C:N and lignin:N ratios had negative effects on the decomposition rate (k, especially during the winter. Meanwhile, microbial biomass carbon (MBC, N (MBN, and P (MBP were positively correlated with k values during the first growing season. These biotic factors accounted for 60.0% and 56.4% of the variation in decomposition rate during the winter and the growing season in the first year, respectively. Specifically, litter chemistry (C, N, P, K, lignin, C:N and lignin:N ratio independently explained 29.6% and 13.3%, and the microbe-related factors (MBC, MBN, MBP, bacterial and fungal biomass, sucrase and ACP activity explained 22.9% and 34.9% during the first winter and the first growing season, respectively. We conclude that frequent freeze-thaw cycles and litter chemical properties determine the winter decomposition while microbe-related factors play more important roles in determining decomposition in the subsequent growing season.

  8. Aby Warburg, Images and Exhibitions. Aby Warburg, Bilderreihen und Ausstellungen edited by Uwe Fleckner and Isabelle Woldt, Akademie Verlag, 2012

    Directory of Open Access Journals (Sweden)

    Matthew Rampley

    2012-12-01

    Full Text Available This article reviews the latest volume in the collected works of Aby Warburg published by Akademie Verlag. The volume consists of exhibitions and plates of images Warburg compiled to illustrate lectures in the period between 1925-1929. The review focuses on two key issues raised by the publication: the light it casts on the Mnemosyne Atlas Warburg was working on at the same time, and, in particular, how it helps shape perceptions of the broader intellectual direction of Warburg's thinking in the final half decade of his life.

  9. Variation in winter snowpack depth and duration influences summer soil respiration in a subalpine meadow

    Science.gov (United States)

    Arnold, C. L.; Ghezzehei, T. A.; Berhe, A. A.

    2012-12-01

    Subalpine meadows in the Sierra Nevada rely on the depth and duration of the winter snowpack to supply ample water to restore the water table in the meadow during the spring snowmelt. This study examines the role that interannual variability in the winter snowpack plays in the overall rate of summer soil respiration along a hydrologic gradient in a subalpine meadow. Carbon dioxide efflux from the meadow was measured from June through September in 2011 and 2012 using soil collars and a LICOR 8100A infrared gas analyzer. Preliminary results show that soil respiration rates are influenced by the hydrologic gradient across the meadow, with drier regions peaking earlier in the summer as compared to wetter regions. We also show that high snowpack years can suppress soil respiration in the meadow until late in the summer season as compared to low snowpack years, where soil respiration peaks early in the summer.

  10. Clinical Characteristics and Outcomes of Patients with High Ankle-Brachial Index from the IMPACT-ABI Study.

    Science.gov (United States)

    Nishimura, Hitoshi; Miura, Takashi; Minamisawa, Masatoshi; Ueki, Yasushi; Abe, Naoyuki; Hashizume, Naoto; Mochidome, Tomoaki; Harada, Mikiko; Shimizu, Kunihiko; Shoin, Wataru; Yoshie, Koji; Oguchi, Yasutaka; Ebisawa, Soichiro; Motoki, Hirohiko; Izawa, Atsushi; Koyama, Jun; Ikeda, Uichi; Kuwahara, Koichiro

    2016-01-01

    Reduced ankle-brachial index (ABI) is a predictor of cardiovascular events. However, the significance of high ABI remains poorly understood. This study aimed to assess the characteristics and outcomes of patients with high ABI. The IMPACT-ABI study was a retrospective cohort study that enrolled and examined ABI in 3,131 patients hospitalized for cardiovascular disease between January 2005 and December 2012. From this cohort, 2,419 patients were identified and stratified into two groups: high ABI (> 1.4; 2.6%) and normal ABI (1.0-1.4; 97.3%). The primary endpoint was the cumulative incidence of major adverse cardiovascular events (MACE), including cardiovascular-associated death, myocardial infarction, and stroke. Compared with the normal ABI group, patients in the high ABI group showed significantly lower body mass index (BMI) and hemoglobin level, but had higher incidence of chronic kidney disease and hemodialysis. Multivariate logistic regression analysis revealed that hemodialysis was the strongest predictor of high ABI (odds ratio, 6.18; 95% confidence interval (CI), 3.05-12.52; P hemodialysis are more frequent in patients with high ABI. Hemodialysis is the strongest predictor of high ABI. High ABI is a parameter that independently predicts MACE.

  11. Bleaching of leaf litter and associated microfungi in subboreal and subalpine forests.

    Science.gov (United States)

    Hagiwara, Yusuke; Matsuoka, Shunsuke; Hobara, Satoru; Mori, Akira S; Hirose, Dai; Osono, Takashi

    2015-10-01

    Fungal decomposition of lignin leads to the whitening, or bleaching, of leaf litter, especially in temperate and tropical forests, but less is known about such bleaching in forests of cooler regions, such as boreal and subalpine forests. The purposes of the present study were to examine the extent of bleached area on the surface of leaf litter and its variation with environmental conditions in subboreal and subalpine forests in Japan and to examine the microfungi associated with the bleaching of leaf litter by isolating fungi from the bleached portions of the litter. Bleached area accounted for 21.7%-32.7% and 2.0%-10.0% of total leaf area of Quercus crispula and Betula ermanii, respectively, in subboreal forests, and for 6.3% and 18.6% of total leaf area of B. ermanii and Picea jezoensis var. hondoensis, respectively, in a subalpine forest. In subboreal forests, elevation, C/N ratio and pH of the FH layer, and slope aspect were selected as predictor variables for the bleached leaf area. Leaf mass per area and lignin content were consistently lower in the bleached area than in the nonbleached area of the same leaves, indicating that the selective decomposition of acid unhydrolyzable residue (recalcitrant compounds such as lignin, tannins, and cutins) enhanced the mass loss of leaf tissues in the bleached portions. Isolates of a total of 11 fungal species (6 species of Ascomycota and 5 of Basidiomycota) exhibited leaf-litter-bleaching activity under pure culture conditions. Two fungal species (Coccomyces sp. and Mycena sp.) occurred in both subboreal and subalpine forests, which were separated from each other by approximately 1100 km.

  12. Genecology of Douglas fir in western Oregon and Washington.

    Science.gov (United States)

    J. Bradley St Clair; Nancy L. Mandel; Kenneth W. Vance-Borland

    2005-01-01

    Background and Aims. Genecological knowledge is important for understanding evolutionary processes and for managing genetic resources. Previous studies of coastal Douglas fir (Pseudotsuga menziesii var. menziesii) have been inconclusive with respect to geographical patterns of variation, due in part to...

  13. Growth after thinning in 110-year old Douglas-fir.

    Science.gov (United States)

    Vern P. Yerkes

    1960-01-01

    A 6-year record of growth after thinning indicates that 110-year-old Douglas-fir stands on site 111 land have passed the age when growth capacity can be fully transferred to fewer stems through thinning.

  14. NEEDLE ANATOMY CHANGES WITH INCREASING TREE AGE IN DOUGLAS FIR

    Science.gov (United States)

    Morphological differences between old growth and sapling (Pseudotsuga menziesii, (Mirb.) Franco) Douglas fir trees may extend to differences in needle anatomy. We used microscopy with image analysis to compare and quantify anatomical parameters in cross-sections of previous year...

  15. Simulations of the Newark FIR FEL Operation

    CERN Document Server

    Zheng, Jianjun

    2004-01-01

    The operation of the NJIT/Rutgers FIR FEL is simulated for the first time sing the slightly modified UH code. The lasering behavior is explored for a wide range of parameters. Particularly, we studied the effects on the operation of the microtron based FEL due to the electron beam pulse phase instability which is possibly caused by the microtron cathode back heating. The study shows that for a small phase slew, systematic or random, there is little effect on the normal operation of the FEL. However, a dramatic phase slew of the e-pulse lasting for 1μs kills the operation of the FEL. We estimated the tolerance of the phase instability and discussed the proper operation condition of the device.

  16. Katastroofide järel heldelt lubatud abi pole alati kohale jõudnud / Kaivo Kopli

    Index Scriptorium Estoniae

    Kopli, Kaivo

    2005-01-01

    ÜRO peasekretär Kofi Annan kutsus üles täitma lubadusi anda abi Lõuna-Aasia tsunamis kannatanud riikidele. Artiklis tuuakse näiteid juhtumite kohta, kus looduskatastroofi järel on riikide abi jäänud lubatust väiksemaks

  17. Thinking Allowed: Use of Egocentric Speech after Acquired Brain Injury (ABI)

    Science.gov (United States)

    Rees, Sian A.; Skidmore, David

    2011-01-01

    This paper explores the use of thinking aloud made by young people who have sustained a severe acquired brain injury (ABI). The phenomenon is compared with the concepts of egocentric speech and inner speech before the form of thinking aloud by pupils with ABI is examined. It is suggested that by using thinking aloud, this group of pupils is able…

  18. Coaxial visible and FIR camera system with accurate geometric calibration

    Science.gov (United States)

    Ogino, Yuka; Shibata, Takashi; Tanaka, Masayuki; Okutomi, Masatoshi

    2017-05-01

    A far-infrared (FIR) image contains important invisible information for various applications such as night vision and fire detection, while a visible image includes colors and textures in a scene. We present a coaxial visible and FIR camera system accompanied to obtain the complementary information of both images simultaneously. The proposed camera system is composed of three parts: a visible camera, a FIR camera, and a beam-splitter made from silicon. The FIR radiation from the scene is reflected at the beam-splitter, while the visible radiation is transmitted through this beam-splitter. Even if we use this coaxial visible and FIR camera system, the alignment between the visible and FIR images are not perfect. Therefore, we also present the joint calibration method which can simultaneously estimate accurate geometric parameters of both cameras, i.e. the intrinsic parameters of both cameras and the extrinsic parameters between both cameras. In the proposed calibration method, we use a novel calibration target which has a two-layer structure where thermal emission property of each layer is different. By using the proposed calibration target, we can stably and precisely obtain the corresponding points of the checker pattern in the calibration target from both the visible and the FIR images. Widely used calibration tools can accurately estimate both camera parameters. We can obtain aligned visible and FIR images by the coaxial camera system with precise calibration using two-layer calibration target. Experimental results demonstrate that the proposed camera system is useful for various applications such as image fusion, image denoising, and image up-sampling.

  19. Subthreshold FIR Filter Architecture for Ultra Low Power Applications

    OpenAIRE

    Mishra, Biswajit; M. Al-Hashimi, Bashir

    2008-01-01

    Subthreshold design has been proposed as an effective technique for designing signal processing circuits needed in wireless sensor nodes powered by sources with limited energy. In this paper we propose a subthreshold FIR architecture which brings the benefits of reducedleakage energy, reduced minimum energy point, reduced operating voltage and increased operating frequency when compared with recently reported subthreshold designs. We shall demonstrate this through the design of a 9-tap FIR fi...

  20. FIR filter-based online jerk-constrained trajectory generation

    OpenAIRE

    BESSET, Pierre; BEAREE, Richard

    2017-01-01

    International audience; In the context of human-robot manipulation interaction for service or industrial robotics, the robot controller must be able to quickly react to unpredictable events in dynamic environments. In this paper, a FIR filter-based trajectory generation methodology is presented, combining the simplicity of the analytic second-order trajectory generation, i.e. acceleration-limited trajectory, with the flexibility and computational efficiency of FIR filtering, to generate on th...

  1. Type 2C protein phosphatase ABI1 is a negative regulator of strawberry fruit ripening.

    Science.gov (United States)

    Jia, Hai-Feng; Lu, Dong; Sun, Jing-Hua; Li, Chun-Li; Xing, Yu; Qin, Ling; Shen, Yuan-Yue

    2013-04-01

    Although a great deal of progress has been made toward understanding the role of abscisic acid (ABA) in fruit ripening, many components in the ABA signalling pathway remain to be elucidated. Here, a strawberry gene homologous to the Arabidopsis gene ABI1, named FaABI1, was isolated and characterized. The 1641bp cDNA includes an intact open reading frame that encodes a deduced protein of 546 amino acids, in which putative conserved domains were determined by homology analysis. Transcriptional analysis showed that the levels of FaABI1 mRNA expression declined rapidly during strawberry fruit development as evidenced by real-time PCR, semi-quantitative reverse transcription-PCR, and northern blotting analyses, suggesting that the Ser/Thr protein phosphatase PP2C1 encoded by FaABI1 may be involved in fruit ripening as a negative regulator. The results of Tobacco rattle virus-induced gene silencing and PBI121 vector-mediated overexpression suggested that the down- and up-regulation of FaABI1 mRNA expression levels in degreening strawberry fruit could promote and inhibit ripening, respectively. Furthermore, alteration of FaABI1 expression could differentially regulate the transcripts of a set of both ABA-responsive and ripening-related genes, including ABI3, ABI4, ABI5, SnRK2, ABRE1, CHS, PG1, PL, CHI, F3H, DFR, ANS, and UFGT. Taken together, the data provide new evidence for an important role for ABA in regulating strawberry fruit ripening in the processes of which the type 2C protein phosphatase ABI1 serves as a negative regulator. Finally, a possible core mechanism underlying ABA perception and signalling transduction in strawberry fruit ripening is discussed.

  2. Linking carbon supply to root cell-wall chemistry and mechanics at high altitudes in Abies georgei.

    Science.gov (United States)

    Genet, Marie; Li, Mingcai; Luo, Tianxiang; Fourcaud, Thierry; Clément-Vidal, Anne; Stokes, Alexia

    2011-02-01

    The mobile carbon supply to different compartments of a tree is affected by climate, but its impact on cell-wall chemistry and mechanics remains unknown. To understand better the variability in root growth and biomechanics in mountain forests subjected to substrate mass movement, we investigated root chemical and mechanical properties of mature Abies georgei var. smithii (Smith fir) growing at different elevations on the Tibet-Qinghai Plateau. Thin and fine roots (0·1-4·0 mm in diameter) were sampled at three different elevations (3480, 3900 and 4330 m, the last corresponding to the treeline). Tensile resistance of roots of different diameter classes was measured along with holocellulose and non-structural carbon (NSC) content. The mean force necessary to break roots in tension decreased significantly with increasing altitude and was attributed to a decrease in holocellulose content. Holocellulose was significantly lower in roots at the treeline (29·5 ± 1·3 %) compared with those at 3480 m (39·1 ± 1·0 %). Roots also differed significantly in NSC, with 35·6 ± 4·1 mg g(-1) dry mass of mean total soluble sugars in roots at 3480 m and 18·8 ± 2·1 mg g(-1) dry mass in roots at the treeline. Root mechanical resistance, holocellulose and NSC content all decreased with increasing altitude. Holocellulose is made up principally of cellulose, the biosynthesis of which depends largely on NSC supply. Plants synthesize cellulose when conditions are optimal and NSC is not limiting. Thus, cellulose synthesis in the thin and fine roots measured in our study is probably not a priority in mature trees growing at very high altitudes, where climatic factors will be limiting for growth. Root NSC stocks at the treeline may be depleted through over-demand for carbon supply due to increased fine root production or winter root growth.

  3. Cooperation of three WRKY-domain transcription factors WRKY18, WRKY40, and WRKY60 in repressing two ABA-responsive genes ABI4 and ABI5 in Arabidopsis

    OpenAIRE

    Liu, Zhi-Qiang; Yan, Lu; Wu, Zhen; Mei, Chao; Lu, Kai; Yu, Yong-Tao; LIANG Shan; Zhang, Xiao-Feng; Wang, Xiao-Fang; Zhang, Da-Peng

    2012-01-01

    Three evolutionarily closely related WRKY-domain transcription factors WRKY18, WRKY40, and WRKY60 in Arabidopsis were previously identified as negative abscisic acid (ABA) signalling regulators, of which WRKY40 regulates ABI4 and ABI5 expression, but it remains unclear whether and how the three transcription factors cooperate to regulate expression of ABI4 and ABI5. In the present experiments, it was shown that WRKY18 and WRKY60, like WRKY40, interact with the W-box in the promoters of ABI4 a...

  4. Commercial Thinning to Meet Wood Production Objectives and Develop Structural Heterogeneity: A Case Study in the Spruce-Fir Forest, Quebec, Canada

    Directory of Open Access Journals (Sweden)

    Martin-Michel Gauthier

    2015-02-01

    Full Text Available We evaluated the effectiveness of commercial thinning mainly from below (CT; 0, 26%, 32% and 40% merchantable basal area removals in meeting wood production demands and developing structural heterogeneity in a balsam fir (Abies balsamea (L. Mill and spruce (Picea spp. stand. After 10 years, 32%–40% removals showed a 12%–18% increase in mean diameter and 27%–38% increase in gross merchantable volume (GMV per tree compared to the unthinned control. At the stand level, all thinning treatments generated as much cumulative GMV (harvested volume + GMV after 10 years and gross sawlog volume per hectare as the unthinned control. As for stand structure, eight out of nine thinned experimental units showed increased structural heterogeneity after 10 years, i.e., irregular, positively-skewed diameter distribution with an elongated right tail toward larger trees. The diameter distribution in the unthinned control became more symmetric, unimodal and regular over time, with fewer saplings than at the beginning of the experiment and lower density of larger trees compared to CT. Regeneration density and stocking were abundant in all treatments, largely dominated by balsam fir. Results indicate that thinning can be used to meet wood production objectives and help develop structural heterogeneity in this forest.

  5. Characterizing water, energy and CO2 exchange for a Sky Island subalpine forest in the southwestern USA

    Science.gov (United States)

    Brown-Mitic, C. M.; Shuttleworth, J.; Harlow, C.; Bales, R.

    2003-04-01

    Among the ecosystems present in the semi-arid environment of the Southwestern U.S., Sky Island forest is unique and it has a unique relationship to the sparse surface-water resources available in the region. This ecosystem exists only at the top of mountains because it is only here that, as a long-term average, precipitation input exceeds evapotranspiration to the extent that forest vegetation can survive. Sky Island Forests, therefore, command potentially significant source areas for the water (some originally falling as snow) that ultimately leaves topographically high ground to recharge aquifers in the plains below by mountain-front recharge. They are also very recently recognized as important carbon sinks where very little or no understanding exist of the exchange/cycling dynamics. The Mount Bigelow project provides an empirically based understanding of the hydro- micrometeorological dynamics of a sky island sub-alpine forest in the southwestern U.S. It is the first study to attempt to document, understand, and model the water, energy, and (related) carbon exchanges of the uniquely interesting and, from the water resource standpoint, uniquely important Sky Island forest ecosystem. The fundamental science issues addressed are: the characteristics of the surface-atmosphere exchanges of water, energy and carbon; the storage of moisture and energy in plants and soil; partitioning of winter snow and rain between evapotranspiration/sublimation, deep drainage and the near-surface environmental water resource that sustains the forest. In order to achieve our objective, a network of four below canopy hydro-micrometeorological stations 10 m tall, and one above canopy 30 m tall high resolution eddy correlation tower, were deployed within a predominantly douglas fir/pine second growth forest. Our observations indicate that the surface flux potential (i.e. sensible heat flux (H) potential), defined as the surface-air temperature gradient varies significantly over space as

  6. Population dynamics and bioenergetics of a fossorial herbivore, Thomomys talpoides (Rodentia: Geomyidae), in a spruce-fir sere

    Science.gov (United States)

    Andersen, Douglas C.; MacMahon, James A.

    1981-01-01

    Studies of the bioenergetics of the northern pocket gopher, Thomomys talpoides, are coupled with data on demography, activity budgets, and microclimates to model the energy requirements of individuals and populations in the Wasatch Mountains of Utah during 1976-1979. Metabolic rates during rest increased linearly with decreasing ambient temperature, but burrowing metabolic rates (16.3 mL O2 • h-1 • g-9.75) were independent of both temperature and physical properties of the soil. Radio-telemetry studies indicated that free-ranging gophers are active =50% of each day. Conservative estimates of true energy consumption were calculated using estimates of habitat-specific minimum daily burrowing requirements. Rates of burrowing measured in the laboratory were either ∞ 0.0 or ∞ 2.0 cm/min. The low burrowing rate was observed when the soil was frozen or saturated with water, as would occur in the field in early winter and in spring, respectively. Gophers burrowed through soil at the study site at an average rate of ∞ 1.5 cm/min. Belowground food energy densities at gopher foraging depth declined from 24.6 to 3.2 J/cm3 along a successional gradient (subalpine forb meadow to Engelmann spruce dominated forest). We conclude that individual gophers are food limited within the climax spruce seral stage. Further, daily energy costs associated with reproduction in females may exceed the belowground energy supply available in intermediate seral stages (aspen and subalpine fir). Reduction of burrowing rates for any reason will affect gophers in the late seral stages proportionately more than those resident in the meadow. The peak gopher densities recorded (from 62 individuals/ha in the meadow to 2 individuals/ha in spruce forest) support these inferences. Detailed demographic information was obtained only in the meadow seral stage. Adult survivorship was lower in winter than in summer and varied greatly between years (0.18-0.70 yr-1). Juvenile survivorship from weaning

  7. Genome-Wide Analysis of the bZIP Gene Family Identifies Two ABI5-Like bZIP Transcription Factors, BrABI5a and BrABI5b, as Positive Modulators of ABA Signalling in Chinese Cabbage.

    Directory of Open Access Journals (Sweden)

    Yili Bai

    Full Text Available bZIP (basic leucine zipper transcription factors coordinate plant growth and development and control responses to environmental stimuli. The genome of Chinese cabbage (Brassica rapa encodes 136 putative bZIP transcription factors. The bZIP transcription factors in Brassica rapa (BrbZIP are classified into 10 subfamilies. Phylogenetic relationship analysis reveals that subfamily A consists of 23 BrbZIPs. Two BrbZIPs within subfamily A, Bra005287 and Bra017251, display high similarity to ABI5 (ABA Insensitive 5. Expression of subfamily A BrbZIPs, like BrABI5a (Bra005287/BrbZIP14 and BrABI5b (Bra017251/BrbZIP13, are significantly induced by the plant hormone ABA. Subcellular localization assay reveal that both BrABI5a and BrABI5b have a nuclear localization. BrABI5a and BrABI5b could directly stimulate ABA Responsive Element-driven HIS (a HIS3 reporter gene, which confers His prototrophy or LUC (LUCIFERASE expression in yeast and Arabidopsis protoplast. Deletion of the bZIP motif abolished BrABI5a and BrABI5b transcriptional activity. The ABA insensitive phenotype of Arabidopsis abi5-1 is completely suppressed in transgenic lines expressing BrABI5a or BrABI5b. Overall, these results suggest that ABI5 orthologs, BrABI5a and BrABI5b, have key roles in ABA signalling in Chinese cabbage.

  8. Warming and provenance limit tree recruitment across and beyond the elevation range of subalpine forest.

    Science.gov (United States)

    Kueppers, Lara M; Conlisk, Erin; Castanha, Cristina; Moyes, Andrew B; Germino, Matthew J; de Valpine, Perry; Torn, Margaret S; Mitton, Jeffry B

    2017-06-01

    Climate niche models project that subalpine forest ranges will extend upslope with climate warming. These projections assume that the climate suitable for adult trees will be adequate for forest regeneration, ignoring climate requirements for seedling recruitment, a potential demographic bottleneck. Moreover, local genetic adaptation is expected to facilitate range expansion, with tree populations at the upper forest edge providing the seed best adapted to the alpine. Here, we test these expectations using a novel combination of common gardens, seeded with two widely distributed subalpine conifers, and climate manipulations replicated at three elevations. Infrared heaters raised temperatures in heated plots, but raised temperatures more in the forest than at or above treeline because strong winds at high elevation reduced heating efficiency. Watering increased season-average soil moisture similarly across sites. Contrary to expectations, warming reduced Engelmann spruce recruitment at and above treeline, as well as in the forest. Warming reduced limber pine first-year recruitment in the forest, but had no net effect on fourth-year recruitment at any site. Watering during the snow-free season alleviated some negative effects of warming, indicating that warming exacerbated water limitations. Contrary to expectations of local adaptation, low-elevation seeds of both species initially recruited more strongly than high-elevation seeds across the elevation gradient, although the low-provenance advantage diminished by the fourth year for Engelmann spruce, likely due to small sample sizes. High- and low-elevation provenances responded similarly to warming across sites for Engelmann spruce, but differently for limber pine. In the context of increasing tree mortality, lower recruitment at all elevations with warming, combined with lower quality, high-provenance seed being most available for colonizing the alpine, portends range contraction for Engelmann spruce. The lower

  9. Warming and provenance limit tree recruitment across and beyond the elevation range of subalpine forest

    Science.gov (United States)

    Kueppers, Lara M.; Conlisk, Erin; Castanha, Cristina; Moyes, Andrew B.; Germino, Matthew; de Valpine, Perry; Torn, Margaret S.; Mitton, Jeffry B.

    2017-01-01

    Climate niche models project that subalpine forest ranges will extend upslope with climate warming. These projections assume that the climate suitable for adult trees will be adequate for forest regeneration, ignoring climate requirements for seedling recruitment, a potential demographic bottleneck. Moreover, local genetic adaptation is expected to facilitate range expansion, with tree populations at the upper forest edge providing the seed best adapted to the alpine. Here, we test these expectations using a novel combination of common gardens, seeded with two widely distributed subalpine conifers, and climate manipulations replicated at three elevations. Infrared heaters raised temperatures in heated plots, but raised temperatures more in the forest than at or above treeline because strong winds at high elevation reduced heating efficiency. Watering increased season-average soil moisture similarly across sites. Contrary to expectations, warming reduced Engelmann spruce recruitment at and above treeline, as well as in the forest. Warming reduced limber pine first-year recruitment in the forest, but had no net effect on fourth-year recruitment at any site. Watering during the snow-free season alleviated some negative effects of warming, indicating that warming exacerbated water limitations. Contrary to expectations of local adaptation, low-elevation seeds of both species initially recruited more strongly than high-elevation seeds across the elevation gradient, although the low-provenance advantage diminished by the fourth year for Engelmann spruce, likely due to small sample sizes. High- and low-elevation provenances responded similarly to warming across sites for Engelmann spruce, but differently for limber pine. In the context of increasing tree mortality, lower recruitment at all elevations with warming, combined with lower quality, high-provenance seed being most available for colonizing the alpine, portends range contraction for Engelmann spruce. The lower

  10. Arabidopsis ABI5 plays a role in regulating ROS homeostasis by activating CATALASE 1 transcription in seed germination.

    Science.gov (United States)

    Bi, Chao; Ma, Yu; Wu, Zhen; Yu, Yong-Tao; Liang, Shan; Lu, Kai; Wang, Xiao-Fang

    2017-05-01

    It has been known that ABA INSENSITIVE 5 (ABI5) plays a vital role in regulating seed germination. In the present study, we showed that inhibition of the catalase activity with 3-amino-1,2,4-triazole (3-AT) inhibits seed germination of Col-0, abi5 mutants and ABI5-overexpression transgenic lines. Compared with Col-0, the seeds of abi5 mutants showed more sensitive to 3-AT during seed germination, while the seeds of ABI5-overexpression transgenic lines showed more insensitive. H 2 O 2 showed the same effect on seed germination of Col-0, abi5 mutants and ABI5-overexpression transgenic lines as 3-AT. These results suggest that ROS is involved in the seed germination mediated by ABI5. Further, we observed that T-DNA insertion mutants of the three catalase members in Arabidopsis displayed 3-AT-insensitive or -hypersensitive phenotypes during seed germination, suggesting that these catalase members regulate ROS homeostasis in a highly complex way. ABI5 affects reactive oxygen species (ROS) homeostasis by affecting CATALASE expression and catalase activity. Furthermore, we showed that ABI5 directly binds to the CAT1 promoter and activates CAT1 expression. Genetic evidence supports the idea that CAT1 functions downstream of ABI5 in ROS signaling during seed germination. RNA-sequencing analysis indicates that the transcription of the genes involved in ROS metabolic process or genes responsive to ROS stress is impaired in abi5-1 seeds. Additionally, expression changes in some genes correlative to seed germination were showed due to the change in ABI5 expression under 3-AT treatment. Together, all the findings suggest that ABI5 regulates seed germination at least partly by affecting ROS homeostasis.

  11. Resurgence of human bothriocephalosis (Diphyllobothrium latum in the subalpine lake region

    Directory of Open Access Journals (Sweden)

    Renata BOUCHER-RODONI

    2001-02-01

    Full Text Available Human bothriocephalosis is once again being found in various catchment basins in the subalpine region, including Lago Maggiore and Lac Léman, which however are not isolated cases. Domestic animals are thought to be responsible for the survival of the parasite during the period when no human cases were reported. The new phenomenon of eating raw or poorly cooked fish is responsible for the resurgence of human bothriocephalosis, which affects various lake districts in Europe. This habit of eating raw fish might lead to the resurgence of a much more dangerous human parasitosis, transmitted in a similar way: infestation by Anisakis.

  12. Portugal palus ELilt abi põlengutega võitlemiseks / Kajar Kase

    Index Scriptorium Estoniae

    Kase, Kajar

    2005-01-01

    Sellel aastal on Portugali metsatulekahjudes hukkunud juba 15 inimest ja hetkel on kahjustatud 140 000 hektarit metsa. Appi on tõtanud Prantsusmaa, Saksamaa, Itaalia, Hispaania ja Hollandi helikopterid ja lennukid. Kaart: Abi Portugalile

  13. NOAA GOES-R Series Advanced Baseline Imager (ABI) Level 1b Radiances

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The Advanced Baseline Imager (ABI) instrument samples the radiance of the Earth in sixteen spectral bands using several arrays of detectors in the instrument’s...

  14. Wood formation in Abies balsamea seedlings subjected to artificial defoliation.

    Science.gov (United States)

    Rossi, Sergio; Simard, Sonia; Deslauriers, Annie; Morin, Hubert

    2009-04-01

    We determined the cambial sensitivity and quantified the anatomical differences in xylem of Abies balsamea (L.) Mill. seedlings subjected to artificial defoliation to simulate spruce budworm feeding. Defoliation was performed by removing two-thirds of needles of all current-year shoots for up to four consecutive growth cycles to account for inter- and intra-annual xylem formation. In Experiment 1, xylem development was studied from May to October 2005 in seedlings defoliated at the end of June. In Experiment 2, anatomical features of the xylem were measured along the tree rings formed in 2005 and 2006 during the four cycles of growth and defoliation. Control and defoliated seedlings showed similar patterns of cambial activity and timing of xylem differentiation, although fewer enlarging cells were observed in August to September in defoliated seedlings. Tree-ring widths were similar in control and defoliated seedlings, with thinner rings produced in the greenhouse in winter. No effect of defoliation on cell lumen area was observed, and effects on radial cell diameter and wall thickness were found only occasionally. The results indicate that the A. balsamea seedlings produced all the resources required to maintain stem growth during the four cycles of defoliation.

  15. The abi proteins and their involvement in bacteriocin self-immunity.

    Science.gov (United States)

    Kjos, Morten; Snipen, Lars; Salehian, Zhian; Nes, Ingolf F; Diep, Dzung B

    2010-04-01

    The Abi protein family consists of putative membrane-bound metalloproteases. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes (e.g., pln locus from Lactobacillus plantarum and sag locus from Streptococcus pyogenes), where they probably are involved in self-immunity. By modifying the profile hidden Markov model used to select Abi proteins in the Pfam protein family database, we show that this family is larger than presently recognized. Using bacteriocin-associated Abi genes as a means to search for novel bacteriocins in sequenced genomes, seven new bacteriocin-like loci were identified in Gram-positive bacteria. One such locus, from Lactobacillus sakei 23K, was selected for further experimental study, and it was confirmed that the bacteriocin-like genes (skkAB) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (skkI) conferred immunity against the cognate bacteriocin. Similar investigation of the Abi gene plnI and the Abi-like gene plnL from L. plantarum also confirmed their involvement in immunity to their cognate bacteriocins (PlnEF and PlnJK, respectively). Interestingly, the immunity genes from these three systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of SkkI, and to our knowledge, this represents a new concept in self-immunity.

  16. The Abi Proteins and Their Involvement in Bacteriocin Self-Immunity ▿ †

    Science.gov (United States)

    Kjos, Morten; Snipen, Lars; Salehian, Zhian; Nes, Ingolf F.; Diep, Dzung B.

    2010-01-01

    The Abi protein family consists of putative membrane-bound metalloproteases. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes (e.g., pln locus from Lactobacillus plantarum and sag locus from Streptococcus pyogenes), where they probably are involved in self-immunity. By modifying the profile hidden Markov model used to select Abi proteins in the Pfam protein family database, we show that this family is larger than presently recognized. Using bacteriocin-associated Abi genes as a means to search for novel bacteriocins in sequenced genomes, seven new bacteriocin-like loci were identified in Gram-positive bacteria. One such locus, from Lactobacillus sakei 23K, was selected for further experimental study, and it was confirmed that the bacteriocin-like genes (skkAB) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (skkI) conferred immunity against the cognate bacteriocin. Similar investigation of the Abi gene plnI and the Abi-like gene plnL from L. plantarum also confirmed their involvement in immunity to their cognate bacteriocins (PlnEF and PlnJK, respectively). Interestingly, the immunity genes from these three systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of SkkI, and to our knowledge, this represents a new concept in self-immunity. PMID:20154137

  17. A Novel RNA-Binding Protein Involves ABA Signaling by Post-transcriptionally Repressing ABI2.

    Science.gov (United States)

    Xu, Jianwen; Chen, Yihan; Qian, Luofeng; Mu, Rong; Yuan, Xi; Fang, Huimin; Huang, Xi; Xu, Enshun; Zhang, Hongsheng; Huang, Ji

    2017-01-01

    The Stress Associated RNA-binding protein 1 (SRP1) repressed by ABA, salt and cold encodes a C2C2-type zinc finger protein in Arabidopsis. The knock-out mutation in srp1 reduced the sensitivity of seed to ABA and salt stress during germination and post-germinative growth stages. In contrast, SRP1-overexpressing seedlings were more sensitive to ABA and salt compared to wild type plants. In the presence of ABA, the transcript levels of ABA signaling and germination-related genes including ABI3. ABI5. EM1 and EM6 were less induced in srp1 compared to WT. Interestingly, expression of ABI2 encoding a protein phosphatase 2C protein were significantly up-regulated in srp1 mutants. By in vitro analysis, SRP1 was identified as a novel RNA-binding protein directly binding to 3'UTR of ABI2 mRNA. Moreover, transient expression assay proved the function of SRP1 in reducing the activity of luciferase whose coding sequence was fused with the ABI2 3'UTR. Together, it is suggested that SRP1 is involved in the ABA signaling by post-transcriptionally repressing ABI2 expression in Arabidopsis.

  18. Evaluation of a New Temporary Immersion Bioreactor System for Micropropagation of Cultivars of Eucalyptus, Birch and Fir

    Directory of Open Access Journals (Sweden)

    Edward Businge

    2017-06-01

    Full Text Available The use of liquid instead of solid culture medium for the micropropagation of plants offers advantages such as better access to medium components and scalability through possible automation of the processes. The objective of this work was to compare a new temporary immersion bioreactor (TIB to solid medium culture for the micropropagation of a selection of tree species micropropagated for commercial use: Nordmann fir (Abies nordmanniana (Steven Spach, Eucalyptus (E. grandis x E. urophylla, Downy birch (Betula pubescens Ehrh, and Curly birch (Betula pendula var. carelica. Cultivation of explants in the TIB resulted in a significant increase of multiplication rate and fresh weight of Eucalyptus and B. pendula, but not Betula pubescens. In addition, the fresh weight of embryogenic tissue and the maturation frequency of somatic embryos increased significantly when an embryogenic cell line of A. nordmanniana was cultivated in the TIB compared to solid culture medium. These results demonstrate the potential for scaling up and automating micropropagation by shoot multiplication and somatic embryogenesis in commercial tree species using a temporary immersion bioreactor.

  19. The Role and Regulation of ABI5 (ABA-Insensitive 5) in Plant Development, Abiotic Stress Responses and Phytohormone Crosstalk

    Science.gov (United States)

    Skubacz, Anna; Daszkowska-Golec, Agata; Szarejko, Iwona

    2016-01-01

    ABA Insensitive 5 (ABI5) is a basic leucine zipper transcription factor that plays a key role in the regulation of seed germination and early seedling growth in the presence of ABA and abiotic stresses. ABI5 functions in the core ABA signaling, which is composed of PYR/PYL/RCAR receptors, PP2C phosphatases and SnRK2 kinases, through the regulation of the expression of genes that contain the ABSCISIC ACID RESPONSE ELEMENT (ABRE) motif within their promoter region. The regulated targets include stress adaptation genes, e.g., LEA proteins. However, the expression and activation of ABI5 is not only dependent on the core ABA signaling. Many transcription factors such as ABI3, ABI4, MYB7 and WRKYs play either a positive or a negative role in the regulation of ABI5 expression. Additionally, the stability and activity of ABI5 are also regulated by other proteins through post-translational modifications such as phosphorylation, ubiquitination, sumoylation and S-nitrosylation. Moreover, ABI5 also acts as an ABA and other phytohormone signaling integrator. Components of auxin, cytokinin, gibberellic acid, jasmonate and brassinosteroid signaling and metabolism pathways were shown to take part in ABI5 regulation and/or to be regulated by ABI5. Monocot orthologs of AtABI5 have been identified. Although their roles in the molecular and physiological adaptations during abiotic stress have been elucidated, knowledge about their detailed action still remains elusive. Here, we describe the recent advances in understanding the action of ABI5 in early developmental processes and the adaptation of plants to unfavorable environmental conditions. We also focus on ABI5 relation to other phytohormones in the abiotic stress response of plants. PMID:28018412

  20. Phylogeny and ecophysiology of opportunistic "snow molds" from a subalpine forest ecosystem.

    Science.gov (United States)

    Schmidt, S K; Wilson, K L; Meyer, A F; Gebauer, M M; King, A J

    2008-11-01

    Mats of coenocytic "snow molds" are commonly observed covering the soil and litter of alpine and subalpine areas immediately following snow melt. Here, we describe the phylogenetic placement, growth rates, and metabolic potential of cold-adapted fungi from under-snow mats in the subalpine forests of Colorado. SSU rDNA sequencing revealed that these fungi belong to the zygomycete orders Mucorales and Mortierellales. All of the isolates could grow at temperatures observed under the snow at our sites (0 degrees C and -2 degrees C) but were unable to grow at temperatures above 25 degrees C and were unable to grow anaerobically. Growth rates for these fungi were very high at -2 degrees C, approximately an order of magnitude faster than previously studied cold-tolerant fungi from Antarctic soils. Given the rapid aerobic growth of these fungi at low temperatures, we propose that they are uniquely adapted to take advantage of the flush of nutrient that occurs at the soil-snow interface beneath late winter snow packs. In addition, extracellular enzyme production was relatively high for the Mucorales, but quite low for the Mortierellales, perhaps indicating some niche separation between these fungi beneath the late winter snow pack.

  1. Subalpine Pyrenees received higher nitrogen deposition than predicted by EMEP and CHIMERE chemistry-transport models

    Science.gov (United States)

    Boutin, Marion; Lamaze, Thierry; Couvidat, Florian; Pornon, André

    2015-08-01

    Deposition of reactive nitrogen (N) from the atmosphere is expected to be the third greatest driver of biodiversity loss by the year 2100. Chemistry-transport models are essential tools to estimate spatially explicit N deposition but the reliability of their predictions remained to be validated in mountains. We measured N deposition and air concentration over the subalpine Pyrenees. N deposition was found to range from 797 to 1,463 mg N m-2 year-1. These values were higher than expected from model predictions, especially for nitrate, which exceeded the estimations of EMEP by a factor of 2.6 and CHIMERE by 3.6. Our observations also displayed a reversed reduced-to-oxidized ratio in N deposition compared with model predictions. The results highlight that the subalpine Pyrenees are exposed to higher levels of N deposition than expected according to standard predictions and that these levels exceed currently recognized critical loads for most high-elevation habitats. Our study reveals a need to improve the evaluation of N deposition in mountains which are home to a substantial and original part of the world’s biodiversity.

  2. Biogeochemical impacts of wildfires over four millennia in a Rocky Mountain subalpine watershed.

    Science.gov (United States)

    Dunnette, Paul V; Higuera, Philip E; McLauchlan, Kendra K; Derr, Kelly M; Briles, Christy E; Keefe, Margaret H

    2014-08-01

    Wildfires can significantly alter forest carbon (C) storage and nitrogen (N) availability, but the long-term biogeochemical legacy of wildfires is poorly understood. We obtained a lake-sediment record of fire and biogeochemistry from a subalpine forest in Colorado, USA, to examine the nature, magnitude, and duration of decadal-scale, fire-induced ecosystem change over the past c. 4250 yr. The high-resolution record contained 34 fires, including 13 high-severity events within the watershed. High-severity fires were followed by increased sedimentary N stable isotope ratios (δ15N) and bulk density, and decreased C and N concentrations--reflecting forest floor destruction, terrestrial C and N losses, and erosion. Sustained low sediment C : N c. 20-50 yr post-fire indicates reduced terrestrial organic matter subsidies to the lake. Low sedimentary δ15N c. 50-70 yr post-fire, coincident with C and N recovery, suggests diminishing terrestrial N availability during stand development. The magnitude of post-fire changes generally scaled directly with inferred fire severity. Our results support modern studies of forest successional C and N accumulation and indicate pronounced, long-lasting biogeochemical impacts of wildfires in subalpine forests. However, even repeated high-severity fires over millennia probably did not deplete C or N stocks, because centuries between high-severity fires allowed for sufficient biomass recovery. © 2014 The Authors. New Phytologist © 2014 New Phytologist Trust.

  3. Biological and physical influences on the carbon isotope content of CO2 in a subalpine forest snowpack, Niwot Ridge, Colorado

    Science.gov (United States)

    D. R. Bowling; W. J. Massman; S. M. Schaeffer; S. P. Burns; R. K. Monson; M. W. Williams

    2009-01-01

    Considerable research has recently been devoted to understanding biogeochemical processes under winter snow cover, leading to enhanced appreciation of the importance of many winter ecological processes. In this study, a comprehensive investigation of the stable carbon isotope composition (δ 13C) of CO2 within a high-elevation subalpine...

  4. Mycorrhiza-plant colonization patterns on a subalpine glacier forefront as a model system of primary succession

    Science.gov (United States)

    Efren Cazares; James M. Trappe; Ari Jumpponen

    2005-01-01

    Lyman glacier in the North Cascades Mountains of Washington has a subalpine forefront characterized by a well-developed terminal moraine, inconspicuous successional moraines, fluting, and outwash. These deposits were depleted of symbiotic fungi when first exposed but colonized by them over time after exposure. Four major groups of plant species in this system are (1)...

  5. Factors related to fatigue after paediatric acquired brain injury (ABI).

    Science.gov (United States)

    van Markus-Doornbosch, F; de Kloet, A J; Berger, M A M; Lambregts, S A M; Wolterbeek, R; Vliet Vlieland, T P M

    2016-01-01

    To assess the degree of fatigue in children and youth after traumatic and non-traumatic brain injury (TBI and NTBI) and related factors. Follow-up study including patients with a hospital-based diagnosis of acquired brain injury (ABI), aged 4-20 years at onset and their parents. Parents and children (dependent on age) completed the Paediatric Quality of Life Inventory™ Multidimensional Fatigue Scale (PedsQL™ MFS), which measures general fatigue (GF), sleep/rest fatigue (SRF) and cognitive fatigue (CF). Additional assessments included the Child & Family Follow-up Survey (CFFS) and PedsQL™ 4.0 General Core Scales and sociodemographic and disease characteristics. Eighty-eight parents completed the PedsQL™ MFS 24-30 months after diagnosis, with 49/88 patients (56%) completing the child version. The median age of the patients was 11 years (interquartile range [IQR] = 7). There were 69 patients with TBI (16% moderate/severe TBI) and 19 patients with NTBI (16% moderate/severe NTBI). The median parent-reported and child-reported PedsQL™ MFS Total Scale Scores were 76.5 (SD = 16.4) and 78.5 (12.9), respectively (Spearman r = 0.450, p = 0.001). Apart from NTBI, increasing age and a single-parent household were significantly associated with more fatigue according to the parent-reported PedsQL™ MFS Total Score (and/or one or more sub-scale scores). Two years after onset, in particular, the parent-reported fatigue after NTBI was considerable. Moreover, older children and children from a single-parent household were found to have higher fatigue levels.

  6. On mycorrhiza development of spruces and firs in damaged stands

    Energy Technology Data Exchange (ETDEWEB)

    Ritter, T.; Weber, G.; Kottke, I.; Oberwinkler, F.

    1989-02-01

    The authors studied the very fine roots of sick spruces and firs and established the following: 1. a surprising stability of mycorrhiza development, 2. differences in the dynamism of development and 3. modifications in the composition of the accompanying microfungi. The results suggest connections in the chain of causes of forest disease which have received little attention so far.

  7. Dust in FIR-bright ADF-S galaxies

    Science.gov (United States)

    Małek, K.; Pollo, A.; Takeuchi, T. T.; Buat, V.; Burgarella, D.; Malkan, M.

    2015-02-01

    Multiwavelength Spectral Energy Distributions (SEDs) of far-infrared (FIR) galaxies detected in the AKARI South Ecliptic Poles Survey (ADF-S) allow to trace differences between [Ultra]-Luminous Infrared Galaxies ([U]LIRGS) and other types of star-forming galaxies (SF).

  8. Developmental decline in height growth in Douglas-fir.

    Science.gov (United States)

    Barbara J. Bond; Nicole M. Czarnomski; Clifton Cooper; Michael E. Day; Michael S. Greenwood

    2007-01-01

    The characteristic decline in height growth that occurs over a tree's lifespan is often called "age-related decline." But is the reduction in height growth in aging trees a function of age or of size? We grafted shoot tips across different ages and sizes of Douglas-fir (Pseudotsuga menziesii (Mirb.) Franco) trees to determine whether...

  9. Biology of bats in Douglas-fir forests.

    Science.gov (United States)

    Robin E. Christy; Stephen D. West

    1993-01-01

    Twelve species of bats occur in Douglas-fir forests of the Pacific Northwest, of which nine are known to roost in tree cavities, bark crevices, or foliage, and several are closely associated with old-growth forests. Thus bat populations may be detrimentally affected by forest management practices involving the removal of large, old trees and snags. We review the life...

  10. The biology of arboreal rodents in Douglas-fir forests.

    Science.gov (United States)

    Andrew B. Carey

    1991-01-01

    Arboreal rodents in Douglas-fir forests west of the Cascade crest in Oregon and Washington include (listed in decreasing order of dependence on trees) red tree vole (Phenacomys longicaucfus), northern flying squirrel (Glaucomys sabrinus), Douglas' squirrel (Tamiasciurus douglasii), dusky-footed woodrat...

  11. Seed production of Douglas-fir increased by thinning.

    Science.gov (United States)

    Donald L. Reukema

    1961-01-01

    In planning thinnings and final harvest cuttings for stands of young-growth Douglas-fir, foresters need reliable information on the capacity of young-growth stands to bear seed, on the periodicity of seed crops, and on the effects of thinning and other forest practices on seed production. One of the first studies designed to help provide this information was begun in...

  12. Effects of bear damage on Douglas-fir lumber recovery

    Science.gov (United States)

    Eini C. Lowell; Dennis Dykstra; George McFadden

    2009-01-01

    Bear activily resulting in injury to Douglas-fir (Pseudotsuga menziesii [Mirb.] Franco) trees has been documented as early as the mid-1850s in the Pacific Northwest. The study reported in this article was designed to help managers decide whether the common practice of removing the damaged but potentially valuable butt section of the bottom log and...

  13. Power and Aging Characterization of Digital FIR Filters Architectures

    DEFF Research Database (Denmark)

    Calimera, Andrea; Liu, Wei; Macii, Enrico

    2012-01-01

    -variation, temperature and aging induced variations pose new challenges in the fabrication of the next generation of ICs. This work presents a detailed power and aging characterization of digital FIR filters in an industrial 45nm CMOS technology, and a design space exploration of different filter architectures...

  14. Hormonal control of second flushing in Douglas-fir shoots.

    Science.gov (United States)

    Morris Cline; Mark Yoders; Dipti Desai; Constance Harrington; William. Carlson

    2006-01-01

    Spring-flushing, over-wintered buds of Douglas-fir (Pseudotsuga menziesii (Mirb.) Franco) produce new buds that may follow various developmental pathways. These include second flushing in early summer or dormancy before flushing during the following spring. Second flushing usually entails an initial release of apical dominance as some of the...

  15. Predicting Douglas-fir's response to a warming climate

    Science.gov (United States)

    Andrea Watts; Sheel Bansal; Connie Harrington; Brad. St. Clair

    2015-01-01

    Douglas-fir is an iconic tree in the Pacific Northwest. Although individual trees may appear to be identical, genetic differences within each tree have resulted from adaptation to the local environment. These genetic differences over time have resulted in differences among populations that are important to the species' survival and growth in changing climates....

  16. Analisis Perbandingan Database Jurnal Elektronik Emerald, ProQuest ABI/INFORM dan SpringerLink Bidang Manajemen dan Ekonomi

    OpenAIRE

    Karyatin, Arianiansyah

    2016-01-01

    Penelitian ini dilakukan pada situs database jurnal elektronik Emerald, ProQuest ABI/INFORM dan SpringerLink. Tujuan penelitian ini adalah untuk mengetahui bagaimana konten (muatan) subjek kajian manajemen dan ekonomi pada database Emerald, ProQuest ABI/INFORM dan SpringerLink dan untuk mengetahui di dalam database manakah diantara database Emerald, ProQuest ABI/INFORM, dan Springerlink yang memuat bidang kajian manajemen dan ekonomi yang paling lengkap. Metode yang digunakan dalam pene...

  17. Evaluating the Importance of Plant Functional Traits: the Subalpine and Alpine

    Science.gov (United States)

    Sanchez, A.; Smith, W. K.

    2011-12-01

    Over the past several decades, researchers have attempted to characterize plant groups according to traits that are considered functional, i.e. contributing significantly to fitness. Due to the complexity of measuring fitness, the capability for photosynthetic carbon gain is often used as a proxy. Thus, this approach correlates structural differences to photosynthetic performance, especially those differences that are known to be associated with photosynthesis, are easily measured and inexpensive. At the often sharp boundary between the subalpine forest and alpine community (treeline ecotone), plant structural traits change dramatically, i.e. tall evergreen trees give way abruptly to low-stature shrubs, grasses, forbs, and herbs. Yet, the differences in functional traits, so abundant in the literature for a variety of species and communities, have not been compared contiguous communities such as the subalpine forest and alpine. Can differences in functional traits already identified in the literature also be used to characterize species of these two contrasting communities? Or are there other traits that are most functional and/or, possibly, unique to each community and not the most popular traits reported so far in the literature. Also, does the community structure itself help determine functional traits? For example, the top ten most frequently studied traits (145 total papers from approximately 63 different refereed journals) considered functional include the following (% of the 145 publications): specific leaf area or mass (SLA or SLM 39%), plant height (36%), leaf nitrogen content (34%), leaf size (19%), leaf area (16%), leaf photosynthetic performance (15%), leaf dry matter content (LDMC 15%), leaf mass per unit leaf area (LMA 15%), leaf thickness (15%), and seed mass (14%). In addition, another 120 traits were mentioned as functional, although all fell below a 14% citation rate. Particular focus was placed on this group due to the possibility that they might

  18. Screening of Methanol Extract and Ethyl Acetate Fraction of Abies webbiana Lindl. for Neuropharmacological Activities.

    Science.gov (United States)

    Parkash, O; Kumar, D; Kumar, S

    2015-01-01

    Despite a long traditional of use of Abies webbiana Lindl. (Talispatra; family-Pinaceae) in the treatment of mental disorders, the plant has not been investigated systematically to validate its traditional claims. Thus, the present investigation was undertaken with an objective to investigate neuropharmacological activities of methanol extract of Abies webbiana aerial parts and its ethyl acetate fraction. Properly identified aerial parts were defatted with petroleum ether and then extracted with methanol in a Soxhlet apparatus. Ethyl acetate fraction was prepared by partitioning methanol extract with ethyl acetate using standard procedure. In acute toxicity study, no mortality was observed in animals after oral administration of 2 g/kg dose of methanol extract. The methanol extract (200 or 400 mg/kg, p.o.) and ethyl acetate fraction (25 or 50 mg/kg, p.o.) were evaluated for antianxiety, anticonvulsant, antidepressant, sedative, antistress and analgesic activities using well established models. The methanol extract and ethyl acetate fraction of Abies webbiana aerial parts exhibited significant antianxiety, anticonvulsant, antidepressant, sedative, antistress and analgesic activities with respect to control. Preliminary phytochemical screening showed presence of flavonoids in bioactive ethyl acetate fraction of Abies webbiana aerial parts. It is finally concluded that flavonoids are the bioactive constituents responsible for most of neuropharmacological activities of Abies webbiana.

  19. Exploiting Measurement Uncertainty Estimation in Evaluation of GOES-R ABI Image Navigation Accuracy Using Image Registration Techniques

    Science.gov (United States)

    Haas, Evan; DeLuccia, Frank

    2016-01-01

    In evaluating GOES-R Advanced Baseline Imager (ABI) image navigation quality, upsampled sub-images of ABI images are translated against downsampled Landsat 8 images of localized, high contrast earth scenes to determine the translations in the East-West and North-South directions that provide maximum correlation. The native Landsat resolution is much finer than that of ABI, and Landsat navigation accuracy is much better than ABI required navigation accuracy and expected performance. Therefore, Landsat images are considered to provide ground truth for comparison with ABI images, and the translations of ABI sub-images that produce maximum correlation with Landsat localized images are interpreted as ABI navigation errors. The measured local navigation errors from registration of numerous sub-images with the Landsat images are averaged to provide a statistically reliable measurement of the overall navigation error of the ABI image. The dispersion of the local navigation errors is also of great interest, since ABI navigation requirements are specified as bounds on the 99.73rd percentile of the magnitudes of per pixel navigation errors. However, the measurement uncertainty inherent in the use of image registration techniques tends to broaden the dispersion in measured local navigation errors, masking the true navigation performance of the ABI system. We have devised a novel and simple method for estimating the magnitude of the measurement uncertainty in registration error for any pair of images of the same earth scene. We use these measurement uncertainty estimates to filter out the higher quality measurements of local navigation error for inclusion in statistics. In so doing, we substantially reduce the dispersion in measured local navigation errors, thereby better approximating the true navigation performance of the ABI system.

  20. Differential regulation of macropinocytosis by Abi1/Hssh3bp1 isoforms.

    Directory of Open Access Journals (Sweden)

    Patrycja M Dubielecka

    2010-05-01

    Full Text Available Macropinocytosis, which is a constitutive cellular process of fluid and macromolecule uptake, is regulated by actin cytoskeleton rearrangements near the plasma membrane. Activation of Rac1, which is proposed to act upstream of the actin polymerization regulatory Wave 2 complex, has been found to correlate with enhanced macropinocytosis. One of the components of the Wave 2 complex is Abi1. Multiple, alternatively spliced isoforms of Abi1 are expressed in mammalian cells, but the functional significance of the various isoforms is unknown.Here, using flow cytometric assay analysis for Alexa Fluor 647, we demonstrate that Abi1 isoforms 2 and 3 differentially regulate macropinocytosis. LNCaP cells expressing isoform 3 had increased macropinocytic uptake that correlated with enhanced cell spreading and higher Rac1 activation in comparison to cells expressing isoform 2. Isoform 2 expressing cells had decreased macropinocytic uptake, but demonstrated greater sensitivity to Rac1 activation. Moreover, more isoform 2 was localized within the cytoplasm in comparison to isoform 3, which was more associated with the plasma membrane. Activated Rac1 was found to specifically bind to a site in exon 10 of isoform 2 in vitro. Because of alternative mRNA splicing, exon 10 is absent from isoform 3, precluding similar binding of activated Rac1. Both isoforms, however, bound to inactive Rac1 through the same non-exon 10 site. Thus, Abi1 isoform 3-containing Wave 2 complex exhibited a differential binding to activated vs. inactive Rac1, whereas isoform 2-containing Wave 2 complex bound activated or inactive Rac1 comparably.Based on these observations, we postulate that Abi1 isoforms differentially regulate macropinocytosis as a consequence of their different relative affinities for activated Rac1 in Wave 2 complex. These findings also raise the possibility that isoform-specific roles occur in other Abi1 functions.

  1. Análisis estructural y de diversidad en los bosques de Abies de Jalisco, México Structural and diversity analysis of Abies forests from Jalisco, Mexico

    Directory of Open Access Journals (Sweden)

    Ramón Cuevas-Guzmán

    2011-12-01

    Full Text Available En 24 parcelas de 0.1 ha, distribuidas en 5 áreas del estado de Jalisco, se determinaron la estructura, composición florística y diversidad de los bosques de Abies, y sus atributos fueron comparados entre áreas. Se registraron 64 especies, 47 géneros y 35 familias. Asteraceae, Pinaceae y Fagaceae y los géneros Quercus, Pinus y Abies fueron los más ricos en especies. El 56% de los individuos tuvo alturas entre 2 y 14 m; las mayores se presentaron en Abies religiosa var. emarginata, A. guatemalensis var. jaliscana, Quercus xalapensis y A. religiosa var. religiosa. Los mayores valores de densidad, área basal, frecuencia y valor de importancia fueron para A. religiosa var. emarginata, A. religiosa var. religiosa, Pinus pseudostrobus y Podocarpus matudae. Los individuos de las especies presentaron una distribución diamétrica en forma de "J" invertida en las 5 zonas estudiadas, mientras que la riqueza y la diversidad de especies no mostraron diferencias estadísticas significativas entre las áreas. La similitud promedio entre las parcelas de las 5 áreas mostró diferencias estadísticas significativas para 4 de ellas. Aunque muy diferentes en su composición florística, los bosques de Abies de Jalisco resultaron similares en riqueza, diversidad y estructura. En las 5 áreas, las comunidades mostraron buena capacidad de recuperación pues en todos los estratos se presentaron individuos altos y árboles emergentes.Structure, floristic composition and diversity in Abies forests were determined in twenty-four 0.1 ha plots in 5 areas in Jalisco State. The resulting attributes were compared between areas. Sixty four species, 47 genera and 35 families were recorded. The families Asteraceae, Pinaceae and Fagaceae, as well as the genera Quercus, Pinus and Abies had the highest species richness. More than half (56% of the individuals had a height ranging between 2 and 14 m, with Abies religiosavar. emarginata, A. guatemalensis var. jaliscana

  2. GOES-R ABI Emissive IR Bands Radiometric Performance Monitoring and Trending

    OpenAIRE

    Qian, Haifeng; Iacovazzi, Robert; Wu, Xiangqian; Efremova, Boryana; Yu, Fangfang; Shao, Xi

    2017-01-01

    The first of a new generation of imaging instruments - the Advanced Baseline Imager (ABI) was launched aboard the first of the Geostationary Operational Environmental Satellites - R Series (GOES-R), currently named GOES-16, on November 19 2017. The main payload instrument on-board is Advanced Baseline Imager (ABI), which has 16 multi-spectral bands covering the spectrum between 0.47µm and 13.3 µm to provide continuous data stream for weather forecasting, disaster monitoring, and long-term cli...

  3. A preliminary study of the deterioration of alder and Douglas-fir chips in outdoor piles.

    Science.gov (United States)

    Ernest. Wright

    1954-01-01

    In the fall of 1952, E. E. Matson of the Pacific Northwest Forest and Range Experiment Station learned that the Fir-Tex Insulating Board Company bf St. Helens, Oregon was considering mixing alder with Douglas-fir chips for outside storage. Since alder heartwood i s more susceptible to decay than that of Douglas-fir, the question arose whether mixing the two might...

  4. Degrading Precision Arithmetics for Low-power FIR Implementation

    DEFF Research Database (Denmark)

    Albicocco, Pietro; Cardarilli, Gian Carlo; Nannarelli, Alberto

    2011-01-01

    In this paper a review of different techniques used to implement highly optimized DSP systems is presented. The case of study is the implementation of parallel FIR filters aimed to applications characterized by high speed and high selectivity in frequency where at the same time low power dissipat......In this paper a review of different techniques used to implement highly optimized DSP systems is presented. The case of study is the implementation of parallel FIR filters aimed to applications characterized by high speed and high selectivity in frequency where at the same time low power...... on selective bit freezing, DPA-II, based on VDD voltage scaling, and DPA-III, based on power gating. Some theoreticaVsimuiative analysis of the introduced arithmetic errors and some implementation results are shown. A discussion on the suitability of these methodologies on standard cell technologies and FPGAs...

  5. Noniterative Design of 2-Channel FIR Orthogonal Filters

    Directory of Open Access Journals (Sweden)

    Jiménez M Elena Domínguez

    2007-01-01

    Full Text Available This paper addresses the problem of obtaining an explicit expression of all real FIR paraunitary filters. In this work, we present a general parameterization of 2-channel FIR orthogonal filters. Unlike other approaches which make use of a lattice structure, we show that our technique designs any orthogonal filter directly, with no need of iteration procedures. Moreover, in order to design an -tap 2-channel paraunitary filterbank, it suffices to choose independent parameters, and introduce them in a simple expression which provides the filter coefficients directly. Some examples illustrate how this new approach can be used for designing filters with certain desired properties. Further conditions can be eventually imposed on the parameters so as to design filters for specific applications.

  6. A compact CO bipolar outflow from NGC 2024 FIR6

    Energy Technology Data Exchange (ETDEWEB)

    Richer, J.S. (Mullard Radio Astronomy Observatory, Cambridge (UK). Cavendish Lab.)

    1990-07-15

    The discovery is reported of a bipolar outflow source in the NGC 2024 cloud core, which appears to be associated with both the 1300-{mu}m continuum source FIR6, and a water maser. This flow is compact (size {approx} 0.05 pc), displays bright, wide line-wings (total width {approx} 125 km s{sup -1}) and has a mechanical luminosity L{sub CO} {approx} 15 times the solar luminosity. These properties suggest that FIR6 is a young stellar object of high mass: from the correlation of mechanical luminosity with bolometric luminosity, the source luminosity is > {approx} 10{sup 3.5} times the solar luminosity. The short dynamical timescale of this flow suggests that the system is very young, but the high inferred luminosity implies that the object has evolved beyond the stage of isothermal protostellar contraction. (author).

  7. Cyclotron Resonance Gain for FIR and THz Radiation in Graphene

    CERN Document Server

    Cole, Nightvid

    2016-01-01

    A cyclotron resonance maser source using low-effective-mass conduction electrons in graphene, if successful, would allow for generation of Far Infrared (FIR) and Terahertz (THz) radiation without requiring magnetic fields running into the tens of Tesla. In order to investigate this possibility, we consider a device in which electrons are effectively injected via pumping from the valence band to the conduction band using an infrared (IR) laser source, subsequently gyrate in a magnetic field applied perpendicular to the plane of the graphene, and give rise to gain for a FIR/THz wave crossing the plane of the graphene. A set of integral expressions is derived by assuming that the non-radiative energy loss processes of the electrons can be adequately represented by a damping force proportional and antiparallel to their momentum. Minimal gain may occur at very short electron damping times of hundreds of femtoseconds.

  8. Identification and Characterization of the Phage Gene sav, Involved in Sensitivity to the Lactococcal Abortive Infection Mechanism AbiV

    DEFF Research Database (Denmark)

    Haaber, Jakob Brandt Borup; Rousseau, G. M.; Hammer, Karin

    2009-01-01

    Lactococcus lactis phage mutants that are insensitive to the recently characterized abortive infection mechanism AbiV were isolated and analyzed in an effort to elucidate factors involved in the sensitivity to AbiV. Whole-genome sequencing of the phage mutants p2.1 and p2.2 revealed mutations...

  9. Nutrients in foliage and wet deposition of nitrate, ammonium and sulfate in washing tree top in Abies religiosa forests

    Science.gov (United States)

    E.R Peña-Mendoza; A. Gómez-Guerrero; Mark Fenn; P. Hernández de la Rosa; D. Alvarado Rosales

    2016-01-01

    The nutritional content and tree top in the forests are evaluated of Abies religiosa, San Miguel Tlaixpan (SMT) and Rio Frio (RF), State of Mexico. The work had two parts. In the first, the nutritional content was evaluated in new foliage (N, P, K, Ca and Mg) in Abies religiosa trees, in periods of spring, summer and winter, in...

  10. Effect of abscisic acid on stomatal opening in isolated epidermal strips of abi mutants of Arabidopsis thaliana

    NARCIS (Netherlands)

    Roelfsema, MRG; Prins, HBA

    1995-01-01

    Abscisic acid-insensitive mutants of Arabidopsis thaliana L. var. Landsberg erecta were selected for their decreased sensitivity to ABA during germination. Two of these mutants, abi-1 and abi-2, display a wilty phenotype as adult plants, indicating disturbed water relations. Experiments were

  11. Department of Defense (DOD) Automated Biometric Identification System (ABIS) Version 1.2: Initial Operational Test and Evaluation Report

    Science.gov (United States)

    2015-05-01

    Director, Operational Test and Evaluation Department of Defense (DOD) Automated Biometric Identification System (ABIS) Version 1.2 Initial...Operational Test and Evaluation Report May 2015 This report on the Department of Defense (DOD) Automated Biometric Identification System ...COVERED - 4. TITLE AND SUBTITLE Department of Defense (DOD) Automated Biometric Identification System (ABIS) Version 1.2 Initial Operational Test

  12. Dowel-nut connection in Douglas-fir peeler cores

    Science.gov (United States)

    Ronald W. Wolfe; John R. King; Agron. Gjinolli

    As part of an effort to encourage more efficient use of small-diameter timber, the Forest Products Laboratory cooperated with Geiger Engineers in a study of the structural properties of Douglas-fir peeler cores and the efficacy of a bdowel-nutc connection detail for application in the design of a space frame roof system. A 44.5-mm- (1.75-in.-) diameter dowel-nut...

  13. Predicting fir trees stem diameters using Artificial Neural Network ...

    African Journals Online (AJOL)

    The aim of this paper is to examine the applicability of Artificial Neural Network models (ANNs), in the prediction of fir trees stem over bark diameters at 5.3, 9.3, 13.3, 17.3, 21.3, 25.3, 29.3 and 33.3 meters above ground. The values of these diameters are necessary for an efficient estimation of a single tree volume using the ...

  14. Douglas-fir displays a range of growth responses to ...

    Science.gov (United States)

    Douglas-fir (Pseudotsuga menziesii var. menziesii (Mirb.) Franco) growth in the Pacific Northwest is affected by climatic, edaphic factors and Swiss needle cast (SNC) disease. We examine Douglas-fir growth responses to temperature, dewpoint deficit (DPD), soil moisture, and SNC using time series intervention analysis of intra-annual tree-ring width data collected at nine forest stands in western Oregon, USA. The effects of temperature and SNC were similar in importance on tree growth at all sites. Previous-year DPD during the annual drought period was a key factor limiting growth regionally. Winter temperature was more important at high elevation cool sites, whereas summer temperature was more important at warm and dry sites. Growth rate increased with summer temperature to an optimum (Topt) then decreased at higher temperatures. At drier sites, temperature and water affected growth interactively such that Topt decreased with decreasing summer soil moisture. With climate change, growth rates increased at high elevation sites and declined at mid-elevation inland sites since ~1990. Growth response to climate is masked by SNC regionally. We conclude that as temperature rises and precipitation patterns shift towards wetter winters and drier summers, Douglas-fir will experience greater temperature and water stress and an increase in severity of SNC. By the end of the 21st century, climate models predict hotter, drier summers and warmer, wetter winters in the Pac

  15. AbiV, a Novel Antiphage Abortive Infection Mechanism on the Chromosome of Lactococcus lactis subsp. cremoris MG1363

    DEFF Research Database (Denmark)

    Haaber, Jakob Brandt Borup; Moineau, Sylvain; Fortier, Louis-Charles

    2008-01-01

    resistance against virulent lactococcal phages belonging to the 936 and c2 species with an efficiency of plaquing of 10(-4), but it did not protect against members of the P335 species. A high level of expression of the ORF did not affect the cellular growth rate. Assays for phage adsorption, DNA ejection......, restriction/modification activity, plaque size, phage DNA replication, and cell survival showed that the ORF encoded an abortive infection (Abi) mechanism. Sequence analysis revealed a deduced protein consisting of 201 amino acids which, in its native state, probably forms a dimer in the cytosol. Similarity...... searches revealed no homology to other phage resistance mechanisms, and thus, this novel Abi mechanism was designated AbiV. The mode of action of AbiV is unknown, but the activity of AbiV prevented cleavage of the replicated phage DNA of 936-like phages....

  16. Comparison of remote sensing and plant trait-based modelling to predict ecosystem services in subalpine grasslands

    Czech Academy of Sciences Publication Activity Database

    Homolová, Lucie; Schaepman, M. E.; Lamarque, L.; Clevers, J.G.P.W.; de Bello, Francesco; Thuiller, W.; Lavorel, S.

    2014-01-01

    Roč. 5, č. 8 (2014), č. článku 100. ISSN 2150-8925 Institutional support: RVO:67179843 ; RVO:67985939 Keywords : land-use change * leaf chlorophyll content * imaging spectroscopy * water-content * aviris data * spectral reflectance * hyperspectral data * species richness * area index * vegetation * aisa * biomass * ecosystem properties * ecosystem services * linear regression * remote sensing * spatial heterogeneity * subalpine grasslands Subject RIV: EH - Ecology, Behaviour; EF - Botanics (BU-J) Impact factor: 2.255, year: 2014

  17. The Effect of Re-Planting Trees on Soil Microbial Communities in a Wildfire-Induced Subalpine Grassland

    OpenAIRE

    Ed-Haun Chang; Guanglong Tian; Chih-Yu Chiu

    2017-01-01

    Wildfire often causes tremendous changes in ecosystems, particularly in subalpine and alpine areas, which are vulnerable due to severe climate conditions such as cold temperature and strong wind. This study aimed to clarify the effect of tree re-planting on ecosystem services such as the soil microbial community after several decades. We compared the re-planted forest and grassland with the mature forest as a reference in terms of soil microbial biomass C and N (Cmic and Nmic), enzyme activit...

  18. Effects of long-term population fluctuations of a top predator on invertebrate communities in subalpine ponds in Colorado

    OpenAIRE

    Wissinger, S.; Whiteman, H.; Denoël, Mathieu; Greig, H.; Butkas, K.

    2006-01-01

    Experimental and comparative data from subalpine ponds with and without tiger salamanders (Ambystoma tigrinum nebulosum) suggest that this species is a keystone predator on benthic and planktonic prey communities. At our study site in central Colorado, the population size of salamanders has fluctuated cyclically over the past 20 years from fewer than 100 to over 5000 individuals. Here we present long-term benthic data that reveal taxon- and habitat-specific correlations with fluctuations in s...

  19. The Response of Subalpine Vegetation to Climate Change and Bark Beetle Infestations: A Multi-Scale Interaction.

    Science.gov (United States)

    Foster, A.; Shuman, J. K.; Shugart, H. H., Jr.; Negrón, J. F.

    2015-12-01

    Mean annual temperatures in the western United States have increased in the last few decades, and are predicted to continue warming. In the subalpine zone of the Rocky Mountains, this warming is also predicted to increase the frequency and severity of spruce beetle outbreaks. Climate change itself may affect this vegetation, potentially leading to shifts in species compositions. These forests are a crucial part of the US's carbon budget, thus it is important to analyze how climate change and bark beetles in conjunction will affect the biomass and species composition of vegetation in subalpine zone. UVAFME is an individual-based gap model that simulates biomass and species composition of a forest. This model has been quantitatively tested at various Rocky Mountain sites in the Front Range, and has been shown to accurately simulate the vegetation dynamics in the region. UVAFME has been updated with a spruce beetle subroutine that calculates the probability for beetle infestation of each tree on a plot. This probability is based on site, climate, and individual tree characteristics, such as temperature; stand structure; and tree stress level, size, and age. These governing characteristics are based on data from the US Forest Service, and other studies on spruce susceptibility and spruce beetle phenology. UVAFME is then run with multiple climate change and beetle scenarios to determine the net effect of both variables on subalpine vegetation. These results are compared among the different scenarios and to current forest inventory data. We project that increasing temperatures due to climate change will cause an increase in the frequency and severity of spruce beetle outbreaks, leading to a decrease in the biomass and dominance of Engelmann spruce. These results are an important step in understanding the possible futures for the vegetation of subalpine zone in the Rocky Mountains.

  20. Significant mean and extreme climate sensitivity of Norway spruce and silver fir at mid-elevation mesic sites in the Alps.

    Directory of Open Access Journals (Sweden)

    Marco Carrer

    Full Text Available Climate forcing is the major abiotic driver for forest ecosystem functioning and thus significantly affects the role of forests within the global carbon cycle and related ecosystem services. Annual radial increments of trees are probably the most valuable source of information to link tree growth and climate at long-term time scales, and have been used in a wide variety of investigations worldwide. However, especially in mountainous areas, tree-ring studies have focused on extreme environments where the climate sensitivity is perhaps greatest but are necessarily a biased representation of the forests within a region. We used tree-ring analyses to study two of the most important tree species growing in the Alps: Norway spruce (Picea abies and silver fir (Abies alba. We developed tree-ring chronologies from 13 mesic mid-elevation sites (203 trees and then compared them to monthly temperature and precipitation data for the period 1846-1995. Correlation functions, principal component analysis and fuzzy C-means clustering were applied to 1 assess the climate/growth relationships and their stationarity and consistency over time, and 2 extract common modes of variability in the species responses to mean and extreme climate variability. Our results highlight a clear, time-stable, and species-specific response to mean climate conditions. However, during the previous-year's growing season, which shows the strongest correlations, the primary difference between species is in their response to extreme events, not mean conditions. Mesic sites at mid-altitude are commonly underrepresented in tree-ring research; we showed that strong climatic controls of growth may exist even in those areas. Extreme climatic events may play a key role in defining the species-specific responses on climatic sensitivity and, with a global change perspective, specific divergent responses are likely to occur even where current conditions are less limited.

  1. Significant mean and extreme climate sensitivity of Norway spruce and silver fir at mid-elevation mesic sites in the Alps.

    Science.gov (United States)

    Carrer, Marco; Motta, Renzo; Nola, Paola

    2012-01-01

    Climate forcing is the major abiotic driver for forest ecosystem functioning and thus significantly affects the role of forests within the global carbon cycle and related ecosystem services. Annual radial increments of trees are probably the most valuable source of information to link tree growth and climate at long-term time scales, and have been used in a wide variety of investigations worldwide. However, especially in mountainous areas, tree-ring studies have focused on extreme environments where the climate sensitivity is perhaps greatest but are necessarily a biased representation of the forests within a region. We used tree-ring analyses to study two of the most important tree species growing in the Alps: Norway spruce (Picea abies) and silver fir (Abies alba). We developed tree-ring chronologies from 13 mesic mid-elevation sites (203 trees) and then compared them to monthly temperature and precipitation data for the period 1846-1995. Correlation functions, principal component analysis and fuzzy C-means clustering were applied to 1) assess the climate/growth relationships and their stationarity and consistency over time, and 2) extract common modes of variability in the species responses to mean and extreme climate variability. Our results highlight a clear, time-stable, and species-specific response to mean climate conditions. However, during the previous-year's growing season, which shows the strongest correlations, the primary difference between species is in their response to extreme events, not mean conditions. Mesic sites at mid-altitude are commonly underrepresented in tree-ring research; we showed that strong climatic controls of growth may exist even in those areas. Extreme climatic events may play a key role in defining the species-specific responses on climatic sensitivity and, with a global change perspective, specific divergent responses are likely to occur even where current conditions are less limited.

  2. Significant Mean and Extreme Climate Sensitivity of Norway Spruce and Silver Fir at Mid-Elevation Mesic Sites in the Alps

    Science.gov (United States)

    Carrer, Marco; Motta, Renzo; Nola, Paola

    2012-01-01

    Climate forcing is the major abiotic driver for forest ecosystem functioning and thus significantly affects the role of forests within the global carbon cycle and related ecosystem services. Annual radial increments of trees are probably the most valuable source of information to link tree growth and climate at long-term time scales, and have been used in a wide variety of investigations worldwide. However, especially in mountainous areas, tree-ring studies have focused on extreme environments where the climate sensitivity is perhaps greatest but are necessarily a biased representation of the forests within a region. We used tree-ring analyses to study two of the most important tree species growing in the Alps: Norway spruce (Picea abies) and silver fir (Abies alba). We developed tree-ring chronologies from 13 mesic mid-elevation sites (203 trees) and then compared them to monthly temperature and precipitation data for the period 1846–1995. Correlation functions, principal component analysis and fuzzy C-means clustering were applied to 1) assess the climate/growth relationships and their stationarity and consistency over time, and 2) extract common modes of variability in the species responses to mean and extreme climate variability. Our results highlight a clear, time-stable, and species-specific response to mean climate conditions. However, during the previous-year's growing season, which shows the strongest correlations, the primary difference between species is in their response to extreme events, not mean conditions. Mesic sites at mid-altitude are commonly underrepresented in tree-ring research; we showed that strong climatic controls of growth may exist even in those areas. Extreme climatic events may play a key role in defining the species-specific responses on climatic sensitivity and, with a global change perspective, specific divergent responses are likely to occur even where current conditions are less limited. PMID:23209823

  3. Spatial Pattern of the Mitochondrial and Chloroplast Genetic Variation in Poland as a Result of the Migration of Abies alba Mill. from Different Glacial Refugia

    Directory of Open Access Journals (Sweden)

    Monika Litkowiec

    2016-11-01

    Full Text Available Currently, the information on the gene pool of silver fir (Abies alba Mill. at the northeastern edge of its distribution in Poland is scarce and insufficient. Using the advantage provided by markers with different modes of inheritance, a hypothesis that gene flow via both seeds and pollen contributed to the genetic structure across the entire analyzed region was investigated. The geographic distribution of maternally inherited mitochondrial DNA (mtDNA, nad5-4 and paternally inherited chloroplast DNA (cpDNA, psbC variation was studied in 81 Polish populations and three reference populations from Ukraine and Romania. The spatial pattern of mtDNA haplotypes (dispersed via seeds indicated that the Apennine Peninsula was the only maternal glacial refugium for the entire territory of Poland and also the Ukraine no 1 population, whereas the other two populations—Ukraine no 2 and Romania—had the haplotype representing the Balkan origin. By contrast, the cpDNA haplotypes (dispersed via pollen from all studied Polish and reference populations showed that A. alba colonized the current natural range from two genetically distinct glacial refugia located on the Apennine and Balkan peninsulas. The occurrence of cpDNA haplotypes varied among the studied populations. Additionally, statistical analyses were used to infer the genetic structure of examined populations. Two distinct groups of A. alba populations were identified showing the postglacial geographic distribution of haplotypes of both mtDNA and cpDNA. A. alba is an important ecological and economic component of forest ecosystems in Europe. An understanding of the Holocene history of this species is relevant for planning sustainable forest management, and acquired data can contribute to strategies of conservation and restoration.

  4. The Effect of Re-Planting Trees on Soil Microbial Communities in a Wildfire-Induced Subalpine Grassland

    Directory of Open Access Journals (Sweden)

    Ed-Haun Chang

    2017-10-01

    Full Text Available Wildfire often causes tremendous changes in ecosystems, particularly in subalpine and alpine areas, which are vulnerable due to severe climate conditions such as cold temperature and strong wind. This study aimed to clarify the effect of tree re-planting on ecosystem services such as the soil microbial community after several decades. We compared the re-planted forest and grassland with the mature forest as a reference in terms of soil microbial biomass C and N (Cmic and Nmic, enzyme activities, phospholipid fatty acids (PLFA composition, and denaturing gradient gel electrophoresis (DGGE. The Cmic and Nmic did not differ among the grassland, re-planted forest and mature forest soil; however, ratios of Cmic/Corg and Nmic/Ntot decreased from the grassland to re-planted forest and mature forest soil. The total PLFAs and those attributed to bacteria and Gram-positive and Gram-negative bacteria did not differ between the re-planted forest and grassland soil. Principle component analysis of the PLFA content separated the grassland from re-planted forest and mature forest soil. Similarly, DGGE analysis revealed changes in both bacterial and fungal community structures with changes in vegetation. Our results suggest that the microbial community structure changes with the re-planting of trees after a fire event in this subalpine area. Recovery of the soil microbial community to the original state in a fire-damaged site in a subalpine area may require decades, even under a re-planted forest.

  5. Responses Of Subalpine Conifer Seedling Germination And Survival To Soil Microclimate In The Alpine Treeline Warming Experiment

    Science.gov (United States)

    Castanha, C.; Moyes, A. B.; Torn, M. S.; Germino, M. J.; Kueppers, L. M.

    2011-12-01

    At Niwot Ridge, Colorado, we used common gardens and climate manipulations to investigate potential subalpine tree species range shifts due to climate change. In Fall 2009 we harvested seed from local populations of limber pine and Englemann spruce, which we sowed in 3 experimental sites spanning an elevation gradient from lower subalpine forest (3080m asl), to the upper subalpine treeline ecotone (3400m asl), to the alpine tundra (3550m asl). In October we turned on overhead infrared heaters designed to increase growing season surface soil temperature by 4-5°C, and following snowmelt in 2010 we crossed this heating treatment with manual watering, adding 3mm of water each week. Here we report on the species, site, and treatment effects on seedling emergence and survival as mediated by snowmelt date, soil temperature, and soil moisture. Depending on the site and plot, heating accelerated germination by 1 to 4 weeks. Germination degree days (heat accumulation required for seed germination) were greater for pine than for spruce and greater in drier plots. Seedling survival was explained by date of emergence, with older seedlings more likely to survive the season. Survival was also explained by drought degree days -- the number of days below critical soil moisture thresholds compounded by high temperature -- with lower thresholds for spruce than for pine. Our preliminary results indicate that a warmer environment will stimulate germination for both species, but that, survival - especially for spruce - will be critically modulated by summer soil moisture.

  6. Pakistan vajab abi - kas maailma tõesti ei huvita? / Urmas Jaagant

    Index Scriptorium Estoniae

    Suurkask, Heiki, 1972-

    2010-01-01

    Pakistan saab igal aastal suurt rahvusvahelist abi. Mitmed riigid on üleujutustes Pakistani toetanud nüüdki kümnete miljonite dollaritega, kuid riikide tahe annetada on erinev, sest mitte iga abidollarit ei suunata Pakistanis sinna, kus seda tegelikult vajatakse

  7. Photosynthetic characteristics of Fagus sylvatica and Quercus robur established for stand conversion from Picea abies

    Science.gov (United States)

    E.S. Gardiner; J.J. O’Brien; M. Löf; J.A. Stanturf; P. Madsen

    2009-01-01

    Efforts in Europe to convertNorway spruce (Picea abies) plantations to broadleaf ormixed broadleaf-conifer forests could be bolstered by an increased understanding of how artificial regeneration acclimates and functions under a range of Norway spruce stand conditions. We studied foliage characteristics and leaflevel photosynthesis on 7-year-old European beech (Fagus...

  8. In Vitro antioxidant activity of extracts from the leaves of Abies ...

    African Journals Online (AJOL)

    Traditionally, the leaves of Abies pindrow Royle are employed as an ayurvedic remedy for fever, hypoglycaemic, respiratory and inflammatory conditions. In this study, dichloromethane, methanol and acetone extracts of A. pindrow leaves were analysed for their phytochemical content and in vitro antioxidant activities.

  9. Complex bud architecture and cell-specific chemical patterns enable supercooling of Picea abies bud primordial

    Science.gov (United States)

    Bud primordia of Picea abies, despite a frozen shoot, stay ice free down to -50 °C by a mechanism termed supercooling whose biophysical and biochemical requirements are poorly understood. Bud architecture was assessed by 3D-reconstruction, supercooling and freezing patterns by infrared video thermog...

  10. Abiotic Factors and Yushania Influences on Abies Forest Composition in Taiwan

    Directory of Open Access Journals (Sweden)

    Cheng-Tao Lin

    2014-09-01

    Full Text Available Abies kawakamii forests are generally distributed above 3,000 m in Taiwanese high mountains. The community data used in our analysis were derived from the database of the National Vegetation Diversity Inventory and Mapping Project of Taiwan (NVDIMP, and environmental data were obtained from the WorldClim and NVDIMP databases. We used non-metric multidimensional scaling (NMDS to identify vegetation composition of Abies communities and the structural equation models (SEMs were used to examine the complex relationships between environmental factors and vegetation composition. The results of ordination showed the most important factors determining species composition of Abies forests involved habitat rockiness, heat load index, warmth index and summer and winter. SEM results approved the warmth index and winter precipitation were the main drivers determining the latent variable—climate, which significantly affect the overstory composition of Abies communities. The relative frequency of Yushania niitakayamensis also had a minor effect on the overstory. However, the relative frequency of Yushania had strong and significant effects on the understory flora and it was also strongly correlated with rock ratio and winter precipitation. Moreover, the overstory displayed a negative but insignificant coefficient on the understory composition, and this might be attributed to the fragile and high heterogeneous habitat in Taiwanese high mountain areas.

  11. The Classical Classroom: Enhancing Learning for Pupils with Acquired Brain Injury (ABI)

    Science.gov (United States)

    Rees, Sian A.; Skidmore, David

    2008-01-01

    This paper seeks to draw parallels between different approaches to classroom instruction and two contrasting musical styles and to examine how pupils with Acquired Brain Injuries (ABI) might fare in each. A polyphonic classroom is defined as one where an awareness of multiple layers of meaning are encouraged to enhance the learning opportunities,…

  12. Long-term Results of ABI in Children With Severe Inner Ear Malformations.

    Science.gov (United States)

    Sennaroğlu, Levent; Sennaroğlu, Gonca; Yücel, Esra; Bilginer, Burçak; Atay, Gamze; Bajin, M Demir; Mocan, Burçe Özgen; Yaral, Mehmet; Aslan, Filiz; Çnar, Betül Çiçek; Özkan, Burcu; Batuk, Merve Özbal; Kirazl, Çiğdem Ekin; Karakaya, Jale; Ataş, Ahmet; Saraç, Sarp; Ziyal, İbrahim

    2016-08-01

    To report the long-term outcomes of children who received auditory brainstem implant (ABI) because of severe inner ear malformations. Retrospective chart review. Tertiary referral otolaryngology clinic. Between July 2006 and October 2014, 60 children received ABI at Hacettepe University. Preoperative work up included otolaryngologic examination, audiological assessment, radiological evaluation together with assessment of language development and psychological status. The surgeries were performed via retrosigmoid approach with a pediatric neurosurgeon. Intraoperatively, electrical auditory brainstem response was utilized. Initial stimulation was done 4 to 5 weeks postoperatively. Outcomes were evaluated with Categories of Auditory Performance (CAP), speech intelligibility rate (SIR), functional auditory performance of cochlear implant (FAPCI) and Manchester Spoken Language Development Scale scores; receptive and expressive language ages were determined. Sixty children who received ABI were between ages of 12 and 64 months. Thirty-five patients with follow up period of at least 1 year, were reported in means of long-term audiological and language results. The most prevelant inner ear malformation was cochlear hypoplasia (n = 19). No major complication was encountered. Majority of the patients were in CAP 5 category, which implies that they can understand common phrases without lip reading. SIR was found out to be better with improving hearing thresholds. Children with ABI were performing worse than average cochlear implantation (CI) users when FAPCI scores were compared. Patients with the best hearing thresholds have expressive vocabulary of 50 to 200 words when evaluated with Manchester Spoken Language Development Scale. There was no relationship between the number of active electrodes and hearing thresholds. The type of inner ear anomaly with the best and the worst hearing thresholds were common cavity and cochlear aperture aplasia, respectively. Patients with

  13. Ten-year variability in fluxes, meteorology, and environmental conditions at a Colorado subalpine forest site

    Science.gov (United States)

    Burns, S. P.; Turnipseed, A.; Bowling, D. R.; Hu, J.; Monson, R. K.

    2009-12-01

    Changing meteorological and environmental conditions affect fluxes; model analysis has shown that environmental variability directly accounts for about half the interannual variability in net ecosystem exchange (NEE) of CO2 whereas the other 50% is due to biotic responses to these changing variables (Richardson et al. 2007). In our study, ten years (1998-2008) of turbulent flux measurements of heat, water vapor, and CO2 at the Niwot Ridge AmeriFlux site (Monson et al. 2002) are examined with respect to meteorological conditions (atmospheric temperature, stability, precipitation, and cloudiness) as well as changes in environmental conditions, such as snow depth and soil moisture. The typical yearly cycle and an estimate of the magnitude of year-to-year variability in the diurnal fluxes and other variables for a high-elevation subalpine forest ecosystem are presented. Wintertime ecosystem respiration has an average 30-min NEE of 0.62 μmol m-2 s-1 with an interannual range between 0.5-1 μmol m-2 s-1. Uptake of CO2 in late summer has an average NEE of -0.71 μmol m-2 s-1 with an interannual range between -0.1 to -1.5 μmol m-2 s-1. Previous studies at the Niwot Ridge AmeriFlux site have described the importance of photosynthetic photon flux density (PPFD) (Monson et al. 2002) and also growing season length (Hu et al. 2009) on NEE. Water isotope ratios analyzed by Hu et al. (2009) have shown that trees at the site primarily rely on water from snowmelt to sustain them throughout the summer; combining this result with the SIPNET model, Hu et al. conclude that there is a limited connection between summer precipitation and the cumulative annual gross primary production (GPP). We have tested this conclusion more explicitly by examining the response of NEE to specific precipitation events and the effect of extended dry periods on the diel cycle of the fluxes, CO2 mole fraction, sap flow, and other meteorological and soil variables. Additionally, we examine the connection

  14. Response of subalpine grasslands communities to clear-cut and prescribed burnt to control shrub encroachment in Pyrenees

    Science.gov (United States)

    Alados, Concepción L.; Gartzia, Maite; Nuche, Paloma; Saiz, Hugo; Pueyo, Yolanda

    2017-04-01

    Anthropogenic activities have modified vegetation in subalpine belts for long time, lowering treeline ecotone and influencing landscape mainly through grazing and fire. During the last decades the abandonment of traditional land use practices and global warming are contributing largely to the colonization of woody species in subalpine grasslands causing irreversible changes in ecosystem functioning. To prevent those changes a variety of management strategies are carried out to stop the expansion of the highly encroaching shrubs, which require the use of fire and/or clear-cutting, particularly for the conservation of grasslands in subhumid high productive ecosystems. However, it is still poorly understood how different management strategies affect the recovery of subalpine grasslands. Using a field experiment we tested the impact of management treatments on soil properties and vegetation characteristics, including species richness, community structure, interspecies interaction, and complexity of network association. Vegetation was monitored during four years in eight stands (two stands per treatment) where the vegetation was removed by prescribed fire (Burnt treatment), or by mechanical removal (Clear-cut treatment). Two undisturbed E. horridum stands were used as a control (C-Erizón) and two grassland communities regularly grazed (C-Grass) were used as a control for subalpine grassland. Soils nutrients declined in Burnt treatment 3 years after fire, but not differences between Clear-cut and C-Erizón were observed. Species richness and diversity were larger in C-Grass and lower in C-Erizón. Burnt and Clear-cut treatments increased species diversity and richness gradually after 4 year treatment. The proportion of legume forbs, grasses and non-legume forbs did not reach the levels of C-Grass after 4 years of Clear-cut or Burnt treatments. Shrubs and sub-shrubs increased faster after 4 years of burning than after 4 years of clearing, although they did not reach the

  15. Assessing the Climate Sensitivity of Cold Content and Snowmelt in Seasonal Alpine and Subalpine Snowpacks

    Science.gov (United States)

    Jennings, K. S.; Molotch, N. P.

    2016-12-01

    In cold, high-elevation sites, snowpack cold content acts as a buffer against climate warming by resisting snowmelt during periods of positive energy fluxes. To test the climate sensitivity of cold content and snowmelt, we employed the physical SNOWPACK snow model, forced with a 23-year, hourly, quality-controlled, gap-filled meteorological dataset from the Niwot Ridge Long Term Ecological Research (LTER) site in the Front Range mountains of Colorado. SNOWPACK was run at two points with seasonal snowpacks within the LTER, one in the alpine (3528 m) and one in the subalpine (3022 m). Model output was validated using snow water equivalent (SWE), snowpack temperature, and cold content data from snow pits dug near the met stations and automated SWE data from nearby SNOTEL snow pillows. Cold content accumulates primarily through additions of new snow, while negative energy fluxes—cooling through longwave emission and sublimation—play a lesser role, particularly in the deeper snowpack of the alpine. On average, the snowpack energy balance becomes positive on April 1 in the alpine and March 8 in the subalpine. Peak SWE occurs after these dates and its timing is primarily determined by the amount of precipitation received after peak cold content, with persistent snowfall delaying the main snowmelt pulse. Years with lower cold content, due to reduced precipitation and/or increased air temperature, experience an earlier positive energy balance with more melt events occurring before the date of peak SWE, which has implications for soil moisture, streamflow volume and timing, water uptake by vegetation, and microbial respiration. Synthetic warming experiments show significant cold content reductions and increased late-winter/early-spring melt as positive energy balances occur earlier in the snow season (a forward shift between 5.1 and 21.0 days per °C of warming). These results indicate cold, high-elevation sites, which are critical for water resources in the western

  16. [Dynamics of species diversity in artificial restoration process of subalpine coniferous forest].

    Science.gov (United States)

    Wu, Yan; Liu, Qing; He, Hai; Lin, Bo

    2004-08-01

    Through plot investigation and by adopting the concept of space as a substitute for time, the developments of species diversity of trees, shrubs and herbaceous plants in subalpine coniferous plantations at different restoration stages were studied, and the correlation coefficients of species in each layer were discussed. The results indicated that in the restoration process, the species richness, diversity and evenness in subalpine coniferous plantations were gradually increased in a fluctuating way. The restoration process of Picea asperata plantations showed a tendency of development that in favor of resuming species diversity. The indices of species richness (species number and Margalef index) and species diversity (Shannon-Wiener index and Simpson index) of trees increased rapidly from the early stages of plantation establishment to the stage of canopy closing (about 30 yr of stand age) and then presented a tendency of decrease with some slight fluctuations, while the index of species evenness showed a periodical rising trend. For the shrub layer, the indices of species richness (Simpson index and Macintosh index) gradually increased with increasing restoration years, whereas the indices of species diversity (Shannon-Wiener index) decreased in the early stages, sharply increased during the stages of canopy closing, and then slowly decreased, which exhibited a tendency of high-->low-->high. In the layer of herbaceous plants, the indices of species richness (Margalef index and number of species) and species diversity (Simpson index, Macintosh index and Shannon-Wiener index) presented a trend of decrease in the early stages of plantations establishment to canopy closing and increased later on. During this process, herbaceous species and their life forms changed greatly, with shade tolerant species gradually substituting the intolerant species. Among the plantations of different stand ages, the average correlation coefficients of trees, shrubs and herbaceous

  17. Early development of matched planted and naturally regenerated Douglas-fir stands after slash burning in the Cascade Range.

    Science.gov (United States)

    R.E. Miller; R.E. Bigley; S. Webster

    1993-01-01

    We compared matched planted and naturally regenerated plots in 35- to 38- year-old Douglas-fir (Pseudotsuga menziesii var. menziesii) stands at seven locations in western Washington and Oregon. Total number of live stems is similar, but stands planted to Douglas fir average 26 more live stemslac of Douglas-fir and 39 fewer...

  18. A SNP resource for douglas-fir: de novo transcriptome assembly and SNP detection and validation

    Science.gov (United States)

    Glenn R. Howe; Jianbin Yu; Brian Knaus; Richard Cronn; Scott Kolpak; Peter Dolan; W. Walter Lorenz; Jeffrey F.D. Dean

    2013-01-01

    Douglas-fir (Pseudotsuga menziesii), one of the most economically and ecologically important tree species in the world, also has one of the largest tree breeding programs. Although the coastal and interior varieties of Douglas-fir (vars. menziesii and glauco) are native to North America, the coastal variety is...

  19. Belowground competition from overstory trees influences Douglas-fir sapling morphology in thinned stands

    Science.gov (United States)

    Warren D. Devine; Timothy B. Harrington

    2009-01-01

    We evaluated effects of belowground competition on morphology of naturally established coast Douglas-fir (Pseudotsuga menziesii var. menziesii (Mirb.) Franco) saplings in 60- to 80-year-old thinned Douglas-fir stands in southwestern Washington. We separately quantified belowground competition from overstory and understory sources...

  20. White fir stands killed by tussock moth...70-mm. color photography aids detection

    Science.gov (United States)

    Steven L. Wert; Boyd E. Wickman

    1968-01-01

    The use of large-scale 70 mm. aerial photography proved to be an effective technique for detecting trees in white fir stands killed by Douglas-fir tussock moth in northeastern California. Correlations between ground and photo estimates of dead trees were high. But correlations between such estimates of lesser degrees of tree damage--thin tops and topkill--were much...

  1. Projected future suitable habitat and productivity of Douglas-fir in western North America

    Science.gov (United States)

    Aaron R. Weiskittel; Nicholas L. Crookston; Gerald E. Rehfeldt

    2012-01-01

    Douglas-fir (Pseudotsuga menziesii [Mirb.] Franco) is one of the most common and commercially important species in western North America. The species can occupy a range of habitats, is long-lived (up to 500 years), and highly productive. However, the future of Douglas-fir in western North America is highly uncertain due to the expected changes in climate conditions....

  2. An audio FIR-DAC in a BCD process for high power Class-D amplifiers

    NARCIS (Netherlands)

    Doorn, T.S.; van Tuijl, Adrianus Johannes Maria; Schinkel, Daniel; Annema, Anne J.; Berkhout, M.; Berkhout, M.; Nauta, Bram

    A 322 coefficient semi-digital FIR-DAC using a 1-bit PWM input signal was designed and implemented in a high voltage, audio power bipolar CMOS DMOS (BCD) process. This facilitates digital input signals for an analog class-D amplifier in BCD. The FIR-DAC performance depends on the ISI-resistant

  3. Conversion of SPORL pretreated Douglas fir forest residues into microbial lipids with oleaginous yeasts

    Science.gov (United States)

    Bruce S. Dien; Junyong Zhu; Patricia J. Slininger; Cletus P. Kurtzman; Bryan R. Moser; Patricia J. O' Bryan; Roland Gleisner; Michael A. Cotta

    2016-01-01

    Douglas fir is the dominant commercial tree grown in the United States. In this study Douglas fir residue was converted to single cell oils (SCO) using oleaginous yeasts. Monosaccharides were extracted from the woody biomass by pretreating with sulfite and dilute sulfuric acid (SPORL process) and hydrolyzing using commercial cellulases. A new SPORL process that uses pH...

  4. Documentation of the Douglas-fir tussock moth outbreak-population model.

    Science.gov (United States)

    J.J. Colbert; W. Scott Overton; Curtis. White

    1979-01-01

    Documentation of three model versions: the Douglas-fir tussock moth population-branch model on (1) daily temporal resolution, (2) instart temporal resolution, and (3) the Douglas-fir tussock moth stand-outbreak model; the hierarchical framework and the conceptual paradigm used are described. The coupling of the model with a normal-stand model is discussed. The modeling...

  5. Multi-decadal establishment for single-cohort Douglas-fir forests

    Science.gov (United States)

    James A. Freund; Jerry F. Franklin; Andrew J. Larson; James A. Lutz

    2014-01-01

    The rate at which trees regenerate following stand-replacing wildfire is an important but poorly understood process in the multi-century development of Douglas-fir (Pseudotsuga menziesii (Mirb.) Franco) and western hemlock (Tsuga heterophylla (Raf.) Sarg.) forests. Temporal patterns of Douglas-fir establishment reconstructed from old-growth forests (>450 year) have...

  6. Survey of Trojan fir seed orchard in Edremit-Gurgendag Region of ...

    African Journals Online (AJOL)

    Abies nordmanniana ssp. Equitrojani, with a limited distribution in Northwestern Anatolia (Kazdaglari Mountain ranges), is one of the four Abies taxa naturally grown in Turkey. Regeneration problems are caused when establishing seed orchards for this important conifer. Seed and cone pests are the main problems ...

  7. Early verification of a hybrid between noble and California red firs

    Science.gov (United States)

    Roy R. Silen; William B. Critchfield; Jerry F. Franklin

    1965-01-01

    Hybrids between Abies procera Rehd., and Abies magnifica A. Murr., made reciprocally at Marys Peak near Corvallis, Oreg., and near Placerville, Calif., suggest that no significant genetic barriers prevent crossing of the two species where ranges overlap. Hence, maintenance of species differences must be looked for in other factors...

  8. Predictions of fire behavior and resistance to control: for use with photo series for the Douglas fir-hemlock type and the coastal Douglas-fir-hardwood type.

    Science.gov (United States)

    David V. SANDBERG; Franklin R. Ward

    1981-01-01

    This publication presents tables on the behavior of fire and the resistance of fuels to control. The information is to be used with the photos in the publication, "Photo Series for Quantifying Forest Residues in the Coastal Douglas-fir—Hemlock Type, Coastal Douglas-fir—Hardwood Type" (Maxwell, Wayne G.; Ward, Franklin R. 1976. Gen. Tech. Rep. PNW-GTR-051....

  9. Analysis of the growth characteristics of a 450-year-old silver fir tree

    Directory of Open Access Journals (Sweden)

    Pantić Damjan

    2015-01-01

    Full Text Available The growth characteristics of silver fir are of high importance for selection forest management, and for the current aims laid out in Serbia’s forest management focused on increasing the share of silver firs in Serbia’s growing stock. With the objective of increasing the understanding of the growth characteristics of silver fir, the growth of two silver fir trees felled during forest site production research on Mt. Goč, located in Central Serbia, have been analyzed. Both trees showed significant differences in their growth dynamics over long periods as results of micro-site and micro-stand effects (primarily ambient light regime. The common growth characteristic of the two trees, a 450-year-old tree as the main study object (labeled Tree A and a 270-year-old Tree B is a long stagnation stage. For Tree A the latent phase, with small interruptions, lasted 410 years; one phase lasted 330 years in continuity, which is the longest period of silver fir stagnation recorded in Europe. Tree B showed a long-lasting stagnation stage that lasted 170 years. The long stagnation stage of Tree A, characterized by an average diameter increment of 1.4 mm/year (average growth ring width of 0.7 mm and an average height increment of 0.08 m/year, shows the extraordinary silver fir capacity for physiological survival in complete shade. This study adds to the existing knowledge of the shade tolerance of the silver fir. Therefore, the silver fir belongs to the group of extremely shade-tolerant tree species. This characteristic makes silver fir an irreplaceable tree species in the selection forest structure. It offers a wide range of silvicultural flexibility in the management of these forests, and is applicable to silver fir selection Serbia’s forests. [Projekat Ministarstva nauke Republike Srbije, br. EVBR 37008: Sustainable management of total forest potentials in the Republic of Serbia

  10. Limnological research in the deep southern subalpine lakes: synthesis, directions and perspectives

    Directory of Open Access Journals (Sweden)

    Nico Salmaso

    2010-06-01

    Full Text Available Based on a selection of 230 papers published during the last 15 years in international journals, the present work aims at evaluating the state of the art of limnological research in the deep southern subalpine lakes (DSL: Garda, Iseo, Como, Lugano and Maggiore. Historically, most of the limnological research was fostered by the need to find solutions to the problems connected with eutrophication and pollution. Many data are available on the thermal structure, algal nutrient concentrations and phytoplankton of the DSL, while other topics still remain more or less constrained to single lakes. Apart from this geographical bias, a number of aspects emerged from this synoptic view. Limnological research is still linked to the concept of scientific monitoring, while experimental studies and modelling are confined to specific niches; the integration of different disciplines is held back by the division of studies on different compartments; integration of studies and synoptic analyses at a macro regional scale have been carried out only for specific research areas. The DSL are increasingly threatened by new pressures (climatic change, excessive proliferation of toxic cyanobacteria, introduction of new species and new micropollutants and by the interactions among these new and old stressors. In this rapidly changing situation, the paper emphasises the need to define criteria to be used to distinguish research able to produce relevant results and predictive models, which are essential elements for an efficient management of water resources.

  11. Patch-Scale Effects of Equine Disturbance on Arthropod Assemblages and Vegetation Structure in Subalpine Wetlands

    Science.gov (United States)

    Holmquist, Jeffrey G.; Schmidt-Gengenbach, Jutta; Ballenger, Elizabeth A.

    2014-06-01

    Assessments of vertebrate disturbance to plant and animal assemblages often contrast grazed versus ungrazed meadows or other larger areas of usage, and this approach can be powerful. Random sampling of such habitats carries the potential, however, for smaller, more intensely affected patches to be missed and for other responses that are only revealed at smaller scales to also escape detection. We instead sampled arthropod assemblages and vegetation structure at the patch scale (400-900 m2 patches) within subalpine wet meadows of Yosemite National Park (USA), with the goal of determining if there were fine-scale differences in magnitude and directionality of response at three levels of grazing intensity. Effects were both stronger and more nuanced than effects evidenced by previous random sampling of paired grazed and ungrazed meadows: (a) greater negative effects on vegetation structure and fauna in heavily used patches, but (b) some positive effects on fauna in lightly grazed patches, suggested by trends for mean richness and total and population abundances. Although assessment of disturbance at either patch or landscape scales should be appropriate, depending on the management question at hand, our patch-scale work demonstrated that there can be strong local effects on the ecology of these wetlands that may not be detected by comparing larger scale habitats.

  12. A molecular investigation of soil organic carbon composition across a subalpine catchment

    Science.gov (United States)

    Hsu, Hsiao-Tieh; Lawrence, Corey R.; Winnick, Matthew J.; Bargar, John R.; Maher, Katharine

    2018-01-01

    The dynamics of soil organic carbon (SOC) storage and turnover are a critical component of the global carbon cycle. Mechanistic models seeking to represent these complex dynamics require detailed SOC compositions, which are currently difficult to characterize quantitatively. Here, we address this challenge by using a novel approach that combines Fourier transform infrared spectroscopy (FT-IR) and bulk carbon X-ray absorption spectroscopy (XAS) to determine the abundance of SOC functional groups, using elemental analysis (EA) to constrain the total amount of SOC. We used this SOC functional group abundance (SOC-fga) method to compare variability in SOC compositions as a function of depth across a subalpine watershed (East River, Colorado, USA) and found a large degree of variability in SOC functional group abundances between sites at different elevations. Soils at a lower elevation are predominantly composed of polysaccharides, while soils at a higher elevation have more substantial portions of carbonyl, phenolic, or aromatic carbon. We discuss the potential drivers of differences in SOC composition between these sites, including vegetation inputs, internal processing and losses, and elevation-driven environmental factors. Although numerical models would facilitate the understanding and evaluation of the observed SOC distributions, quantitative and meaningful measurements of SOC molecular compositions are required to guide such models. Comparison among commonly used characterization techniques on shared reference materials is a critical next step for advancing our understanding of the complex processes controlling SOC compositions.

  13. Phytoplankton association patterns in the deep southern subalpine lakes (Part 2

    Directory of Open Access Journals (Sweden)

    Nico Salmaso

    2003-08-01

    Full Text Available The three following papers constitute the second, and final, part of a series of papers dedicated to the phytoplankton of the deep subalpine Italian lakes (DSL. The first part, comprising an introduction and three papers on lakes Garda, Como and Maggiore respectively, was published in the volume 61 (1 of this journal (J. Limnol., 61. The research, carried out for three years (two years in L.Como in the period 1997-2000, was a concerted effort by investigators of five Insitutes in Italy and Switzerland. It was generated by the awareness that, despite the large number of papers existing on the phytoplankton of the single DSL, those of a comprehensive nature are very few, and by the perceived interest of a comparative investigation on the phytoplankton of the large lakes in the Insubrian district in the light of the recent progress on the ecology of the freshwater algae. So, in the final paper following those on lakes Iseo and Lugano an effort is made to compare and characterize the different species assemblages in the background of geographical and morphological characteristics, and of recent changes in trophic gradients. Despite often important differences in these respects, and observed various community responses, a common pool of species seems to be identifiable in the district.

  14. Development of partial rock veneers by root throw in a subalpine setting

    Science.gov (United States)

    Osterkamp, W.R.; Toy, T.J.; Lenart, M.T.

    2006-01-01

    Rock veneers stabilize hillslope surfaces, occur especially in areas of immature soil, and form through a variety of process sets that includes root throw. Near Westcliffe, Colorado, USA, data were collected from a 20 ?? 500 m transect on the east slope of the Sangre de Cristo Mountains. Ages of pit/mound complexes with rock fragments exposed at the surface by root throw ranged from recent (freshly toppled tree) to unknown (complete tree decay). Calculations based on dimensions of the pit/mound complexes, estimated time of free topppling, sizes of exposed rock fragments, and percentage rock covers at pit/mound complexes, as well as within the transect area, indicate that recent rates of root throw have resulted in only partial rock veneering since late Pleistocene deglaciation. Weathering of rock fragments prevent development of an extensive rock veneer and causes a balance, achieved within an estimated 700 years, between the rates of rock-fragment exposure by root throw and clast disintegration by chemical reduction. The estimated rate of rock-fragment reduction accounts for part of the fluvial sediment yields observed for forested subalpine areas of western North America. Copyright ?? 2005 John Wiley & Sons, Ltd.

  15. Invasion of subalpine meadows by lodgepole pine in Yellowstone National Park, Wyoming, USA

    Energy Technology Data Exchange (ETDEWEB)

    Jakubos, B.; Romme, W.H. (Fort Lewis College, Durango, CO (United States))

    1993-11-01

    Many of the dry and mesic subalpine meadows in Yellowstone National Park are bordered by bands of small lodgepole pine trees. The authors asked whether these stands of small trees represent a directional process of meadow invasion, or alternatively, (1) small patches of postfire succession or; (2) more-or-less stable populations of trees having small stature because of adverse site conditions. Transect studies revealed that the bands of small trees were consistently younger than adjacent forest stands of obvious fire origin, that they lacked any evidence of fire, and that the trees were progressively younger as they approached the meadow. Soils under the young trees generally were more similar to meadow soils than to coniferous forest soils. The authors concluded, therefore, that meadow invasion has been occurring as a directional process since at least the mid- to late 1800s. Frequency of tree establishment in two dry meadows was positively correlated with mean June temperature and total summer precipitation (R[sup 2] = 0.49, P<0.0001, multiple stepwise regression). Thus, the major cause of tree invasion into dry meadows appears to be a regional climatic trend towards warmer and wetter growing seasons since the end of the Little Ice Age. Tree establishment in two mesic meadows was more weakly and inconsistently correlated with weather variables. Thus, the mechanism of invasion of mesic meadows may involve interactions of episodic seed crops and microhabitat changes at the forest border, as well as regional climatic variability. 30 refs., 7 figs., 1 tab.

  16. Targeted grazing for the restoration of sub-alpine shrub-encroached grasslands

    Directory of Open Access Journals (Sweden)

    Massimiliano Probo

    2016-12-01

    Full Text Available The decline of agro-pastoral activities has led to a widespread tree and shrub-encroachment of former semi-natural meso-eutrophic grasslands in many European mountain regions. Temporary night camp areas (TNCA and mineral mix supplements for targeted cattle were arranged over shrub-encroached areas to restore grassland vegetation within the Val Troncea Natural Park (Italy. From 2011 to 2015, their effects on vegetation structure and pastoral value of forage were assessed along permanent transects. Four years after treatments, both practices were effective in reducing the shrub cover and increasing the cover and average height of the herbaceous layer, but changes were more remarkable within TNCA. Moreover, the arrangement of TNCA decreased the cover of nanophanerophytes and increased the cover of graminoids and high quality species, as well as the overall forage pastoral value. In conclusion, TNCA were the most effective pastoral practice to contrast shrub-encroachment and increase herbage mass and forage quality of sub-alpine grasslands.

  17. Extensive wildfires, climate change, and an abrupt state change in subalpine ribbon forests, Colorado.

    Science.gov (United States)

    Calder, W John; Shuman, Bryan

    2017-10-01

    Ecosystems may shift abruptly when the effects of climate change and disturbance interact, and landscapes with regularly patterned vegetation may be especially vulnerable to abrupt shifts. Here we use a fossil pollen record from a regularly patterned ribbon forest (alternating bands of forests and meadows) in Colorado to examine whether past changes in wildfire and climate produced abrupt vegetation shifts. Comparing the percentages of conifer pollen with sedimentary δ18 O data (interpreted as an indicator of temperature or snow accumulation) indicates a first-order linear relationship between vegetation composition and climate change with no detectable lags over the past 2,500 yr (r = 0.55, P changed abruptly within a century of extensive wildfires, which were recognized in a previous study to have burned approximately 80% of the surrounding 1,000 km2 landscape 1,000 yr ago when temperatures rose ~0.5°C. The vegetation change was larger than expected from the effects of climate change alone. Pollen assemblages changed from a composition associated with closed subalpine forests to one similar to modern ribbon forests. Fossil pollen assemblages then remained like those from modern ribbon forests for the following ~1,000 yr, providing a clear example of how extensive disturbances can trigger persistent new vegetation states and alter how vegetation responds to climate. © 2017 by the Ecological Society of America.

  18. Litter Production, Decomposition, and Nutrient Release in Subalpine Forest Communities of the Northwest Himalaya

    Directory of Open Access Journals (Sweden)

    Vinod K. Bisht

    2014-01-01

    Full Text Available Production, decomposition, and release of nutrients from leaf and nonleaf litter were investigated in four subalpine forests of North-West Himalaya, India. Total annual litter fall in four communities varied from 2950.00 to 4040.00 kg ha−1 and was found significant (CD0.05 = 118.2. Decomposition of leaf litter varied from 1.82–3.5% during autumn-winter to 36.14–45.51 during summer rainy season in all stands and percent of mass loss was significantly varied in stands (CD6.00. Similarly, decomposition in nonleaf litter was varied from 0.3–1.1% during autumn-winter to 19.59–30.05% during summer rainy season and was significantly varied irrespective of seasons. However, percent decomposition of leaf litter and the values of decay constant (k were at par in all stands. Total standing state of nutrients in fresh litter as well as release of total nitrogen (N, phosphorus (P, and potassium (K in due course of decomposition (12 months was also varying significantly. The rate of nonleaf litter decomposition was significantly positively correlated with air temperature (r=0.63–0.74 in all communities. The significant correlation (r=0.85 was observed only in Rhododendron-Sorbus forest community (PRS. Study indicates that the air temperature is a major determinant for nonleaf litter decomposition in this region.

  19. Does the aboveground herbivore assemblage influence soil bacterial community composition and richness in subalpine grasslands?

    Science.gov (United States)

    Hodel, Melanie; Schütz, Martin; Vandegehuchte, Martijn L; Frey, Beat; Albrecht, Matthias; Busse, Matt D; Risch, Anita C

    2014-10-01

    Grassland ecosystems support large communities of aboveground herbivores that are known to directly and indirectly affect belowground properties such as the microbial community composition, richness, or biomass. Even though multiple species of functionally different herbivores coexist in grassland ecosystems, most studies have only considered the impact of a single group, i.e., large ungulates (mostly domestic livestock) on microbial communities. Thus, we investigated how the exclusion of four groups of functionally different herbivores affects bacterial community composition, richness, and biomass in two vegetation types with different grazing histories. We progressively excluded large, medium, and small mammals as well as invertebrate herbivores using exclosures at 18 subalpine grassland sites (9 per vegetation type). We assessed the bacterial community composition using terminal restriction fragment length polymorphism (T-RFLP) at each site and exclosure type during three consecutive growing seasons (2009-2011) for rhizosphere and mineral soil separately. In addition, we determined microbial biomass carbon (MBC), root biomass, plant carbon:nitrogen ratio, soil temperature, and soil moisture. Even though several of these variables were affected by herbivore exclusion and vegetation type, against our expectations, bacterial community composition, richness, or MBC were not. Yet, bacterial communities strongly differed between the three growing seasons as well as to some extent between our study sites. Thus, our study indicates that the spatiotemporal variability in soil microclimate has much stronger effects on the soil bacterial communities than the grazing regime or the composition of the vegetation in this high-elevation ecosystem.

  20. Do insects lose flight before they lose their wings? Population genetic structure in subalpine stoneflies.

    Science.gov (United States)

    McCulloch, Graham A; Wallis, Graham P; Waters, Jonathan M

    2009-10-01

    Wing reduction and flightlessness are common features of alpine and subalpine insects, and are typically interpreted as evolutionary adaptations to increase fecundity and promote local recruitment. Here, we assess the impact of wing reduction on dispersal in stoneflies (Plecoptera: Gripopterygidae: Zelandoperla) in southern New Zealand. Specifically, we present comparative phylogeographic analyses (COI; H3) of strong-flying Zelandoperla decorata (144 individuals, 63 localities) vs. the co-distributed but weak-flying Zelandoperla fenestrata species group (186 individuals, 81 localities). The latter group exhibits a variety of morphotypes, ranging from fully winged to completely wingless. Consistent with its capacity for strong flight-mediated dispersal, Z. decorata exhibited no substantial phylogeographic differentiation across its broad South Island range. Conversely the weak-flying fenestrata species group exhibited substantial genetic structure across both fine and broad geographic scales. Intriguingly, the variable degrees of wing development observed within the fenestrata species group had no apparent impact on levels of phylogeographic structure, which were high regardless of morphotype, suggesting that even fully winged specimens of this group do not fly. This finding implies that Zelandoperla flight loss occurs independently of wing loss, and might reflect underlying flight muscle reduction.

  1. Optimum FIR filter for sampled signals in presence of jitter

    Science.gov (United States)

    Cattaneo, Paolo Walter

    1996-02-01

    The requirements of the integrated readout electronics for calorimetry at high luminosity hadron colliders pose new challenges both to hardware design and to the performance of signal processing algorithms. Both aspects have been treated in detail by the FERMI(RD16) collaboration [C. Alippi et al., Nucl. Instr. and Meth. A 344 (1994) 180], from which this work has been motivated. The estimation of the amplitude of sampled signals is usually performed with a digital FIR filter, or with a more sophisticated non linear digital filter using FIR filters as building blocks [S.J. Inkinen and J. Niittylahti, Trainable FIR-order statistic hybrid filters, to be published in IEEE Trans. Circuits and Systems; H. Alexanian et al., FERMI Collaboration, Optimized digital feature extraction in the FERMI microsystem Nucl. Instr. and Meth. A 357 (1995)]. In presence of significant signal phase jitter with respect to the clock, the phase dependence of the filter output can be a major source of error. This is especially true for measurements of large amplitudes for which the effect of electronic noise becomes negligible. This paper reports on the determination of digital FIR filters that optimize the signal over noise ratio due to known jitter distributions for different filter lengths. As the presence of electronic noise is neglected, the results are mainly relevant for measurements of large signals. FERMI is a collaboration with the aim of designing integrated electronics for the read out of calorimeter detectors in particle physics experiments at hadron colliders. It includes: CERN, Geneva, Switzerland; Department of Physics and Measurement Technology, University of Linköping, Sweden; Center for Industrial Microelectronics and Materials Technology, University of Linköping, Sweden; LPNHE Universities Paris VI-VII, Paris, France; Dipartimento di Elettronica, Politecnico di Milano, Italy, Sezine INFN, Pavia, Italy; Dipartimento di Fisica Nucleare e Teorica dell'Universitá e Sezione

  2. Sampling design and required sample size for evaluating contamination levels of 137Cs in Japanese fir needles in a mixed deciduous forest stand in Fukushima, Japan.

    Science.gov (United States)

    Oba, Yurika; Yamada, Toshihiro

    2017-05-01

    We estimated the sample size (the number of samples) required to evaluate the concentration of radiocesium (137Cs) in Japanese fir (Abies firma Sieb. & Zucc.), 5 years after the outbreak of the Fukushima Daiichi Nuclear Power Plant accident. We investigated the spatial structure of the contamination levels in this species growing in a mixed deciduous broadleaf and evergreen coniferous forest stand. We sampled 40 saplings with a tree height of 150 cm-250 cm in a Fukushima forest community. The results showed that: (1) there was no correlation between the 137Cs concentration in needles and soil, and (2) the difference in the spatial distribution pattern of 137Cs concentration between needles and soil suggest that the contribution of root uptake to 137Cs in new needles of this species may be minor in the 5 years after the radionuclides were released into the atmosphere. The concentration of 137Cs in needles showed a strong positive spatial autocorrelation in the distance class from 0 to 2.5 m, suggesting that the statistical analysis of data should consider spatial autocorrelation in the case of an assessment of the radioactive contamination of forest trees. According to our sample size analysis, a sample size of seven trees was required to determine the mean contamination level within an error in the means of no more than 10%. This required sample size may be feasible for most sites. Copyright © 2017 Elsevier Ltd. All rights reserved.

  3. Activation of mRNA translation by phage protein and low temperature: the case of Lactococcus lactis abortive infection system AbiD1

    Directory of Open Access Journals (Sweden)

    Ehrlich S Dusko

    2009-01-01

    Full Text Available Abstract Background Abortive infection (Abi mechanisms comprise numerous strategies developed by bacteria to avoid being killed by bacteriophage (phage. Escherichia coli Abis are considered as mediators of programmed cell death, which is induced by infecting phage. Abis were also proposed to be stress response elements, but no environmental activation signals have yet been identified. Abis are widespread in Lactococcus lactis, but regulation of their expression remains an open question. We previously showed that development of AbiD1 abortive infection against phage bIL66 depends on orf1, which is expressed in mid-infection. However, molecular basis for this activation remains unclear. Results In non-infected AbiD1+ cells, specific abiD1 mRNA is unstable and present in low amounts. It does not increase during abortive infection of sensitive phage. Protein synthesis directed by the abiD1 translation initiation region is also inefficient. The presence of the phage orf1 gene, but not its mutant AbiD1R allele, strongly increases abiD1 translation efficiency. Interestingly, cell growth at low temperature also activates translation of abiD1 mRNA and consequently the AbiD1 phenotype, and occurs independently of phage infection. There is no synergism between the two abiD1 inducers. Purified Orf1 protein binds mRNAs containing a secondary structure motif, identified within the translation initiation regions of abiD1, the mid-infection phage bIL66 M-operon, and the L. lactis osmC gene. Conclusion Expression of the abiD1 gene and consequently AbiD1 phenotype is specifically translationally activated by the phage Orf1 protein. The loss of ability to activate translation of abiD1 mRNA determines the molecular basis for phage resistance to AbiD1. We show for the first time that temperature downshift also activates abortive infection by activation of abiD1 mRNA translation.

  4. Activation of mRNA translation by phage protein and low temperature: the case of Lactococcus lactis abortive infection system AbiD1.

    Science.gov (United States)

    Bidnenko, Elena; Chopin, Alain; Ehrlich, S Dusko; Chopin, Marie-Christine

    2009-01-27

    Abortive infection (Abi) mechanisms comprise numerous strategies developed by bacteria to avoid being killed by bacteriophage (phage). Escherichia coli Abis are considered as mediators of programmed cell death, which is induced by infecting phage. Abis were also proposed to be stress response elements, but no environmental activation signals have yet been identified. Abis are widespread in Lactococcus lactis, but regulation of their expression remains an open question. We previously showed that development of AbiD1 abortive infection against phage bIL66 depends on orf1, which is expressed in mid-infection. However, molecular basis for this activation remains unclear. In non-infected AbiD1+ cells, specific abiD1 mRNA is unstable and present in low amounts. It does not increase during abortive infection of sensitive phage. Protein synthesis directed by the abiD1 translation initiation region is also inefficient. The presence of the phage orf1 gene, but not its mutant AbiD1R allele, strongly increases abiD1 translation efficiency. Interestingly, cell growth at low temperature also activates translation of abiD1 mRNA and consequently the AbiD1 phenotype, and occurs independently of phage infection. There is no synergism between the two abiD1 inducers. Purified Orf1 protein binds mRNAs containing a secondary structure motif, identified within the translation initiation regions of abiD1, the mid-infection phage bIL66 M-operon, and the L. lactis osmC gene. Expression of the abiD1 gene and consequently AbiD1 phenotype is specifically translationally activated by the phage Orf1 protein. The loss of ability to activate translation of abiD1 mRNA determines the molecular basis for phage resistance to AbiD1. We show for the first time that temperature downshift also activates abortive infection by activation of abiD1 mRNA translation.

  5. Prevalence and association of oral candidiasis with dysphagia in individuals with acquired brain injury (ABI)

    DEFF Research Database (Denmark)

    Odgaard, Lene; Nielsen, Jørgen Feldbæk; Kothari, Mohit

    Objective: To describe the prevalence of oral candidiasis (OC) in individuals with acquired brain injury (ABI) and to evaluate the association of OC with improvement in dysphagia. Design: Longitudinal observational study. Methods: Individuals with ABI admitted to a rehabilitation centre were...... recruited over a one-year period. OC-data were collected by clinical examinations and verified by cultivation/microscopy in every 3 weeks during first 10 weeks of admission. Data on dysphagia were collected through medical record reviews. Dysphagia improvement was defined by: 1) First positive change.......7%, respectively. The OC prevalence was 24.8% after one week of admission and reduced to 10.1% after ten weeks of admission. Adjusted hazard ratios for improvement in dysphagia were 0.64-0.77 in OC compared to without OC, though not statistically significant. Conclusion: Prevalence of OC was high at admission...

  6. Xerocomus badius - Picea abies, an ectomycorrhiza of high activity and element storage capacity in acidic soil.

    Science.gov (United States)

    Kottke, I; Qian, X M; Pritsch, K; Haug, I; Oberwinkler, F

    1998-02-01

    Mycorrhizas were collected from three Norway spruce (Picea abies) stands in southwest Germany, sorted on the morphotype level and analysed by fluorescein diacetate vital fluorescence staining and the accumulation of elements using inductively coupled plasma-atomic emission spectrometry (ICP-AES) and electron energy-loss spectroscopy (EELS). Xerocomus badius - Picea abies mycorrhizas showed a higher frequency of active hyphal sheaths and a higher potential to store nitrogen, phosphorus, potassium, magnesium, iron and zinc than other mycorrhizal types. Phosphorus and nitrogen were localized by EELS in vacuolar bodies which occurred consistently in the sheath of X. badius mycorrhizas. The results indicate that X. badius is well adapted to acidic stands and that its mycorrhizas are very efficient in uptake and storage of macronutrients.

  7. Abies semenovii B. Fedtsch. at the Peter the Great Botanical Garden

    Directory of Open Access Journals (Sweden)

    Tkachenko Kirill

    2016-12-01

    Full Text Available Abies semenovii B. Fedtsch. (Pinaceae is an extremely rare flora species of the Central Asia (Kirghizia; it has been cultivated at the Peter the Great Botanical Garden of the Komarov Botanical Institute of the Russian Academy of Sciences (RAS since 1949, where it was first introduced into general cultivation. Since 2000, upon reaching the age of 43 years, the seed reproduction of the plants is being marked. An X-ray test proved seeds, collected in 2014, to be filled and full. In spring 2015, first time in the 67 years of cultivating this specie in St. Petersburg area, first young crops were received. Abies semenovii – a cold hard and decorative tree – has to be introduced into the gardening of St. Petersburg and shall be promoted into the Karelia and further to the northern regions of the European part of the Russian Federation.

  8. Comparison of the Calibration Algorithms and SI Traceability of MODIS, VIIRS, GOES, and GOES-R ABI Sensors

    National Research Council Canada - National Science Library

    Raju Datla; Xi Shao; Changyong Cao; Xiangqian Wu

    2016-01-01

    ...), and geostationary sensors, GOES Imager and the GOES-R Advanced Baseline Imager (ABI) are analyzed towards calibration algorithm harmonization on the basis of SI traceability which is one of the goals of the NOAA National Calibration Center (NCC...

  9. Chemodiversity of the Essential Oil from Leaves of Abies nebrodensis (Lojac.) Mattei.

    Science.gov (United States)

    Schicchi, Rosario; Geraci, Anna; Rosselli, Sergio; Maggio, Antonella; Bruno, Maurizio

    2017-02-01

    Abies nebrodensis (Lojac.) Mattei (Pinaceae) is a species occurring in a very small population only in a restricted area of Sicily. Its taxonomic classification as different species has been object of discussion. In this work the chemical composition of the essential oil from the leaves is presented for the first time and compared to the essential oils from other euroasiatic species reported in literature. Peculiar characteristics of the essential oil of A. nebrodensis are highlighted. © 2017 Wiley-VHCA AG, Zurich, Switzerland.

  10. Simulation of GOES-R ABI aerosol radiances using WRF-CMAQ: a case study approach

    OpenAIRE

    S. A. Christopher

    2014-01-01

    In anticipation of the upcoming GOES-R launch we simulate visible and near-infrared reflectances of the Advanced Baseline Imager (ABI) for cases of high aerosol loading containing regional haze and smoke over the eastern United States. The simulations are performed using the Weather Research and Forecasting (WRF), Sparse Matrix Operator Kernel Emissions (SMOKE), and Community Multiscale Air Quality (CMAQ) models. Geostationary, satellite-derived, biomass-burning emissions ar...

  11. Feasibility Demonstration of Near-Surface Unmanned Aircraft Systems for GOES-R ABI Validation

    OpenAIRE

    Pearlman, Aaron; Padula, Francis; Liu, Tung-Chang; Cao, Changyong; Goodman, Steve

    2017-01-01

    The Geostationary Operational Environmental Satellite R-Series (GOES-R) field campaign was focused to provide validation of the SI traceability of the Advanced Baseline Imager (ABI) established pre-launch. In support of this objective, an advanced capability development effort was initiated, “GOES-R near surface unmanned aircraft system (UAS) feasibility demonstration study” to meet the long-term challenges of validating next generation sensors. We report on the results of this 18-month study...

  12. In Vitro Antioxidant Activity of Extracts from the Leaves of Abies Pindrow Royle

    OpenAIRE

    Gupta, D; Bhardwaj, R; Gupta, R K

    2011-01-01

    Traditionally, the leaves of Abies pindrow Royle are employed as an ayurvedic remedy for fever, hypoglycaemic, respiratory and inflammatory conditions. In this study, dichloromethane, methanol and acetone extracts of A. pindrow leaves were analysed for their phytochemical content and in vitro antioxidant activities. The methanol extract exhibited highest antioxidant activity while acetone extract showed presence of relatively high total phenol and flavonoids contents. The present study provid...

  13. Simulation of GOES-R ABI aerosol radiances using WRF-CMAQ: a case study approach

    OpenAIRE

    S. A. Christopher

    2013-01-01

    The primary focus of this paper is to simulate visible and near-infrared reflectances of the GOES-R Advanced Baseline Imager (ABI) for cases of high aerosol loading containing regional haze and smoke over the eastern United States. The simulations are performed using the Weather Research and Forecasting (WRF), Sparse Matrix Operator Kernel Emissions (SMOKE), and Community Multiscale Air Quality (CMAQ) models. Geostationary satellite-derived biomass burning emissions are also included as an in...

  14. A bifunctional geranyl and geranylgeranyl diphosphate synthase is involved in terpene oleoresin formation in Picea abies.

    Science.gov (United States)

    Schmidt, Axel; Wächtler, Betty; Temp, Ulrike; Krekling, Trygve; Séguin, Armand; Gershenzon, Jonathan

    2010-02-01

    The conifer Picea abies (Norway spruce) defends itself against herbivores and pathogens with a terpenoid-based oleoresin composed chiefly of monoterpenes (C(10)) and diterpenes (C(20)). An important group of enzymes in oleoresin biosynthesis are the short-chain isoprenyl diphosphate synthases that produce geranyl diphosphate (C(10)), farnesyl diphosphate (C(15)), and geranylgeranyl diphosphate (C(20)) as precursors of different terpenoid classes. We isolated a gene from P. abies via a homology-based polymerase chain reaction approach that encodes a short-chain isoprenyl diphosphate synthase making an unusual mixture of two products, geranyl diphosphate (C(10)) and geranylgeranyl diphosphate (C(20)). This bifunctionality was confirmed by expression in both prokaryotic (Escherichia coli) and eukaryotic (P. abies embryogenic tissue) hosts. Thus, this isoprenyl diphosphate synthase, designated PaIDS1, could contribute to the biosynthesis of both major terpene types in P. abies oleoresin. In saplings, PaIDS1 transcript was restricted to wood and bark, and transcript level increased dramatically after methyl jasmonate treatment, which induces the formation of new (traumatic) resin ducts. Polyclonal antibodies localized the PaIDS1 protein to the epithelial cells surrounding the traumatic resin ducts. PaIDS1 has a close phylogenetic relationship to single-product conifer geranyl diphosphate and geranylgeranyl diphosphate synthases. Its catalytic properties and reaction mechanism resemble those of conifer geranylgeranyl diphosphate synthases, except that significant quantities of the intermediate geranyl diphosphate are released. Using site-directed mutagenesis and chimeras of PaIDS1 with single-product geranyl diphosphate and geranylgeranyl diphosphate synthases, specific amino acid residues were identified that alter the relative composition of geranyl to geranylgeranyl diphosphate.

  15. Analysis of the Phialocephala subalpina Transcriptome during Colonization of Its Host Plant Picea abies.

    Directory of Open Access Journals (Sweden)

    Vanessa Reininger

    Full Text Available Phialocephala subalpina belongs to the Phialocephala fortinii s.l.-Acepphala applanata species complex (PAC forming one of the major groups belonging to the dark septate endophytes (DSE. Depending on the strain, PAC was shown to form neutral to pathogenic associations with its host plant Picea abies. To understand PACs lifestyle we investigated the effect of presence/absence of Picea abies on the transcriptome of strain 6_70_1.PAC strain 6_70_1 was grown in liquid Pachlewski media either induced by its host plant Picea abies or without host plant as a control. Mycelia were harvested in a time course (1, 2, 3, 4, 7, 11, 18 days with and without induction by the host plant and the fungal transcriptome revealed by Illumina sequencing. Differential gene expression analysis over the time course comparing control and treatment at each time point using the 'edgeR glm approach' and a gene enrichment analysis using GO categories were performed.The three main functional groups within differentially expressed genes were 'metabolism', 'transport' and 'cell rescue, defense and virulence'. Additionally, genes especially involved in iron metabolism could be detected by gene set enrichment analysis.In conclusion, we found PAC strain 6_70_1 to be metabolically very active during colonization of its host plant Picea abies. A major shift in functional groups over the time course of this experiment could not be observed but GO categories which were found to be enriched showed different emphasis depending in the day post induction.

  16. Structural properties of laminated Douglas fir/epoxy composite material

    Energy Technology Data Exchange (ETDEWEB)

    Spera, D.A. (National Aeronautics and Space Administration, Cleveland, OH (USA). Lewis Research Center); Esgar, J.B. (Sverdrup Technology, Inc., Cleveland, OH (USA)); Gougeon, M.; Zuteck, M.D. (Gougeon Bros., Bay City, MI (USA))

    1990-05-01

    This publication contains a compilation of static and fatigue and strength data for laminated-wood material made from Douglas fir and epoxy. Results of tests conducted by several organizations are correlated to provide insight into the effects of variables such as moisture, size, lamina-to-lamina joint design, wood veneer grade, and the ratio of cyclic stress to steady stress during fatigue testing. These test data were originally obtained during development of wood rotor blades for large-scale wind turbines of the horizontal-axis (propeller) configuration. Most of the strength property data in this compilation are not found in the published literature. Test sections ranged from round cylinders 2.25 in. in diameter to rectangular slabs 6 in. by 24 in. in cross section and approximately 30 ft long. All specimens were made from Douglas fir veneers 0.10 in. thick, bonded together with the WEST epoxy system developed for fabrication and repair of wood boats. Loading was usually parallel to the grain. Size effects (reduction in strength with increase in test volume) are observed in some of the test data, and a simple mathematical model is presented that includes the probability of failure. General characteristics of the wood/epoxy laminate are discussed, including features that make it useful for a wide variety of applications. 9 refs.

  17. Final Scientific/Technical report for "ABI8: Prototype of a novel signaling factor"

    Energy Technology Data Exchange (ETDEWEB)

    Finkelstein, Ruth R. [Univ. of California, Santa Barbara, CA (United States)

    2013-02-21

    The Arabidopsis thaliana ABSCISIC ACID-INSENSITIVE8 locus encodes a highly conserved plant-specific protein that mediates abscisic acid (ABA) and sugar responses essential for growth. Although initial database comparisons revealed no domains of predictable function, it has recently been re-annotated as a member of the Glycosyltransferase family A. However, this function has not been demonstrated experimentally and no specific substrates have been identified. Mutations affecting ABI8 are near-lethal due to pleiotropic yet specific effects including altered ABA signaling, sugar transport, cell wall synthesis, root meristem maintenance, vascular patterning, and male sterility. Because the predicted sequence initially provided no clues, we used a guilt by association strategy to address function of this protein by determining its subcellular localization and identifying interacting proteins. Our studies showed that ABI8 is localized to the endomembrane system and may interact with proteins implicated in Golgi trafficking, lignification, and stress signaling. We found that the root meristem arrest reflects decreased auxin accumulation and resulting decreases in regulators required for meristem identity, all of which can be rescued by added glucose. Further studies showed that this glucose-dependence reflects reduced glucose uptake as well as the decreased expression of sugar-mobilizing enzymes. This work suggests that ABI8 may regulate trafficking of membrane proteins such as auxin transporters and cellulose synthase, but this hypothesis has not yet been tested. The altered gene expression is likely to be a secondary or later effect of this pleiotropic mutation.

  18. Chrysophycean stomatocysts from Morskie Oko and Żabie Oko lakes in the Tatra National Park, Poland

    Directory of Open Access Journals (Sweden)

    Jolanta Cabała

    2011-01-01

    Full Text Available Sixteen chrysophycean stomatocysts are reported from the lakes Morskie Oko and Żabie Oko in the Tatra National Park, Poland. Of these, six morphotypes are new to Poland, and two morphotypes plus one forma are new to science. These stomatocysts are illustrated with SEM micrographs and described according to International Statospore Working Group (ISWG guidelines. The comparison of stomatocyst community between Morskie Oko and Żabie Oko lakes is given.

  19. Long-term reactive nitrogen loading alters soil carbon and microbial community properties in a subalpine forest ecosystem

    Science.gov (United States)

    Boot, Claudia M; Hall, Ed K.; Denef, Karolien; Baron, Jill S.

    2016-01-01

    Elevated nitrogen (N) deposition due to increased fossil fuel combustion and agricultural practices has altered global carbon (C) cycling. Additions of reactive N to N-limited environments are typically accompanied by increases in plant biomass. Soil C dynamics, however, have shown a range of different responses to the addition of reactive N that seem to be ecosystem dependent. We evaluated the effect of N amendments on biogeochemical characteristics and microbial responses of subalpine forest organic soils in order to develop a mechanistic understanding of how soils are affected by N amendments in subalpine ecosystems. We measured a suite of responses across three years (2011–2013) during two seasons (spring and fall). Following 17 years of N amendments, fertilized soils were more acidic (control mean 5.09, fertilized mean 4.68), and had lower %C (control mean 33.7% C, fertilized mean 29.8% C) and microbial biomass C by 22% relative to control plots. Shifts in biogeochemical properties in fertilized plots were associated with an altered microbial community driven by reduced arbuscular mycorrhizal (control mean 3.2 mol%, fertilized mean 2.5 mol%) and saprotrophic fungal groups (control mean 17.0 mol%, fertilized mean 15.2 mol%), as well as a decrease in N degrading microbial enzyme activity. Our results suggest that decreases in soil C in subalpine forests were in part driven by increased microbial degradation of soil organic matter and reduced inputs to soil organic matter in the form of microbial biomass.

  20. Trace elements in sub-alpine forest soils on the eastern edge of the Tibetan Plateau, China

    Science.gov (United States)

    Wang, Xiaodan; Cheng, Genwei; Zhong, Xianghao; Li, Mai-He

    2009-08-01

    Industrial development has increased fast in China during the last decades. This has led to a range of environmental problems. Deposition of trace elements to forest ecosystems via the atmosphere is one potential problem. In this paper, we report the results from a pilot study where the trace element levels of the sub-alpine forest soils on the eastern edge of the Tibetan Plateau have been measured. Possible relationships between soil properties and trace element concentrations have also been investigated. The obtained concentrations (mg kg-1) were boron (B) 48.06-53.70, molybdenum (Mo) 1.53-2.26, zinc (Zn) 68.18-79.53, copper (Cu) 36.81-42.44, selenium (Se) 0.33-0.49, cadmium (Cd) 0.16-0.29, lead (Pb) 25.80-30.71, chromium (Cr) 96.10-110.08, nickel (Ni) 30.16-45.60, mercury (Hg) 0.05-0.11, and arsenic (As) 3.09-4.17. With a few exceptions, the element concentration can be characterized as low in the investigated sub-alpine forest soils. No clear differences in trace element levels were found between topsoil and subsoil samples, indicating that the atmospheric deposition of trace element has been low. The soil parent material plays a key role to determine trace element levels. Soil properties, including pHw, organic carbon (OC), clay fraction, cation-exchange capacity (CEC), total iron (Fe), and total aluminum (Al) concentrations were related to trace element concentration using correlation analysis. Total Fe and Al showed the strongest relationships with concentrations of most trace elements in the sub-alpine forest soils. PCA analyses indicated that a significant increase in the number of cars with the fast development of local tourism may result in higher Pb concentration in the future.

  1. Quantitative characterization of the interactions among c-myc transcriptional regulators FUSE, FBP, and FIR.

    Science.gov (United States)

    Hsiao, Hsin-Hao; Nath, Abhinav; Lin, Chi-Yen; Folta-Stogniew, Ewa J; Rhoades, Elizabeth; Braddock, Demetrios T

    2010-06-08

    Human c-myc is critical for cell homeostasis and growth but is a potent oncogenic factor if improperly regulated. The c-myc far-upstream element (FUSE) melts into single-stranded DNA upon active transcription, and the noncoding strand FUSE recruits an activator [the FUSE-binding protein (FBP)] and a repressor [the FBP-interacting repressor (FIR)] to fine-tune c-myc transcription in a real-time manner. Despite detailed biological experiments describing this unique mode of transcriptional regulation, quantitative measurements of the physical constants regulating the protein-DNA interactions remain lacking. Here, we first demonstrate that the two FUSE strands adopt different conformations upon melting, with the noncoding strand DNA in an extended, linear form. FBP binds to the linear noncoding FUSE with a dissociation constant in the nanomolar range. FIR binds to FUSE more weakly, having its modest dissociation constants in the low micromolar range. FIR is monomeric under near-physiological conditions but upon binding of FUSE dimerizes into a 2:1 FIR(2)-FUSE complex mediated by the RRMs. In the tripartite interaction, our analysis suggests a stepwise addition of FIR onto an activating FBP-FUSE complex to form a quaternary FIR(2)-FBP-FUSE inhibitory complex. Our quantitative characterization enhances understanding of DNA strand preference and the mechanism of the stepwise complex formation in the FUSE-FBP-FIR regulatory system.

  2. Tree Biomass Estimation of Chinese fir (Cunninghamia lanceolata) Based on Bayesian Method

    Science.gov (United States)

    Zhang, Jianguo

    2013-01-01

    Chinese fir (Cunninghamia lanceolata (Lamb.) Hook.) is the most important conifer species for timber production with huge distribution area in southern China. Accurate estimation of biomass is required for accounting and monitoring Chinese forest carbon stocking. In the study, allometric equation was used to analyze tree biomass of Chinese fir. The common methods for estimating allometric model have taken the classical approach based on the frequency interpretation of probability. However, many different biotic and abiotic factors introduce variability in Chinese fir biomass model, suggesting that parameters of biomass model are better represented by probability distributions rather than fixed values as classical method. To deal with the problem, Bayesian method was used for estimating Chinese fir biomass model. In the Bayesian framework, two priors were introduced: non-informative priors and informative priors. For informative priors, 32 biomass equations of Chinese fir were collected from published literature in the paper. The parameter distributions from published literature were regarded as prior distributions in Bayesian model for estimating Chinese fir biomass. Therefore, the Bayesian method with informative priors was better than non-informative priors and classical method, which provides a reasonable method for estimating Chinese fir biomass. PMID:24278198

  3. Tree biomass estimation of Chinese fir (Cunninghamia lanceolata based on Bayesian method.

    Directory of Open Access Journals (Sweden)

    Xiongqing Zhang

    Full Text Available Chinese fir (Cunninghamia lanceolata (Lamb. Hook. is the most important conifer species for timber production with huge distribution area in southern China. Accurate estimation of biomass is required for accounting and monitoring Chinese forest carbon stocking. In the study, allometric equation W = a(D2Hb was used to analyze tree biomass of Chinese fir. The common methods for estimating allometric model have taken the classical approach based on the frequency interpretation of probability. However, many different biotic and abiotic factors introduce variability in Chinese fir biomass model, suggesting that parameters of biomass model are better represented by probability distributions rather than fixed values as classical method. To deal with the problem, Bayesian method was used for estimating Chinese fir biomass model. In the Bayesian framework, two priors were introduced: non-informative priors and informative priors. For informative priors, 32 biomass equations of Chinese fir were collected from published literature in the paper. The parameter distributions from published literature were regarded as prior distributions in Bayesian model for estimating Chinese fir biomass. Therefore, the Bayesian method with informative priors was better than non-informative priors and classical method, which provides a reasonable method for estimating Chinese fir biomass.

  4. Assessing heat fluxes and water quality trends in subalpine lakes from EO

    Science.gov (United States)

    Cazzaniga, Ilaria; Giardino, Claudia; Bresciani, Mariano; Elli, Chiara; Valerio, Giulia; Pilotti, Marco

    2017-04-01

    Lakes play a fundamental role in providing ecosystem services such as water supplying, hydrological regulation, climate change mitigation, touristic recreation (Schallenberg et al., 2013). Preserving and improving of quality of lakes waters, which is a function of either both natural and human influences, is therefore an important action to be considered. Remote Sensing techniques are spreading as useful instrument for lakes, by integrating classical in situ limnological measurements to frequent and synoptic monitoring capabilities. Within this study, Earth Observation data are exploited for understanding the temporal changes of water quality parameters over a decade, as well as for measuring the surface energy fluxes in recent years in deep clear lakes in the European subalpine ecoregion. According to Pareth et al. (2016), subalpine lakes are showing a clear response to climate change with an increase of 0.017 °C /year of lake surface temperature, whilst the human activities contribute to produce a large impact (agriculture, recreation, industry, fishing and drinking) on these lakes. The investigation is focused on Lake Iseo, which has shown a significant deterioration of water quality conditions since the seventies, and on Lake Garda, the largest Italian lake where EO data have been widely used for many purposes and applications (Giardino et al., 2014). Available ENVISAT-MERIS (2002-2012) and Landsat-8-OLI (2013-on going) imagery has been exploited to produce chlorophyll-a (chl-a) concentration maps, while Landsat-8-TIRS imagery has been used for estimating lake surface temperatures. MERIS images were processed through a neural network (namely the C2R processor, Doerffer et al., 2007), to correct the atmospheric effects and to retrieve water constituents concentration in optically complex deep waters. With regard to L8's images, some atmospheric correctors (e.g. ACOLITE and 6SV) were tested and validated to indentify, for each of the two lakes, the more accurate

  5. Towards post-launch validation of GOES-R ABI SI traceability with high-altitude aircraft, small near surface UAS, and satellite reference measurements

    Science.gov (United States)

    Padula, Francis; Pearlman, Aaron J.; Cao, Changyong; Goodman, Steve

    2016-09-01

    The GOES-R field campaign (planned for April - June 2017) is focused to support post-launch validation of the Advanced Baseline Imager (ABI) and Geostationary Lightning Mapper (GLM). Great emphasis has been placed in the development of methodologies to achieve the ABI GOES-R field campaign primary objective - validation of ABI L1b spectral radiance observations to ensure the SI traceability established pre-launch. An integrated approach using high altitude aircraft, near surface UAS, and satellite reference measurements was developed to achieve the ABI validation objectives of the GOES-R field campaign. The high-altitude aircraft measurements coupled with special ABI collections are planned to provide the primary pathway (direct comparison) to validate ABI SI traceability of all ABI operational detectors. Near surface Unmanned Aircraft Systems (UAS) are planned to provide a secondary pathway to validate ABI SI traceability through coincident near surface measurements of Earth validation targets using the Earth's surface as a reference (indirect comparison). Satellite reference measurements obtained through special ABI collections and Simultaneous Nadir Overpass (SNO) of reference sensors will also provide a secondary pathway to validate ABI SI traceability. A detailed description of each validation approach, the critical components, and the preliminary expected uncertainties will be presented. The combined collections offer advanced post-launch validation capabilities and foster new perspectives for science teams during the post-launch validation and monitoring of NOAA's next generation of operational environmental satellites.

  6. Hydrologic flow path development varies by aspect during spring snowmelt in complex subalpine terrain

    Science.gov (United States)

    Webb, Ryan W.; Fassnacht, Steven R.; Gooseff, Michael N.

    2018-01-01

    In many mountainous regions around the world, snow and soil moisture are key components of the hydrologic cycle. Preferential flow paths of snowmelt water through snow have been known to occur for years with few studies observing the effect on soil moisture. In this study, statistical analysis of the topographical and hydrological controls on the spatiotemporal variability of snow water equivalent (SWE) and soil moisture during snowmelt was undertaken at a subalpine forested setting with north, south, and flat aspects as a seasonally persistent snowpack melts. We investigated if evidence of preferential flow paths in snow can be observed and the effect on soil moisture through measurements of snow water equivalent and near-surface soil moisture, observing how SWE and near-surface soil moisture vary on hillslopes relative to the toes of hillslopes and flat areas. We then compared snowmelt infiltration beyond the near-surface soil between flat and sloping terrain during the entire snowmelt season using soil moisture sensor profiles. This study was conducted during varying snowmelt seasons representing above-normal, relatively normal, and below-normal snow seasons in northern Colorado. Evidence is presented of preferential meltwater flow paths at the snow-soil interface on the north-facing slope causing increases in SWE downslope and less infiltration into the soil at 20 cm depth; less association is observed in the near-surface soil moisture (top 7 cm). We present a conceptualization of the meltwater flow paths that develop based on slope aspect and soil properties. The resulting flow paths are shown to divert at least 4 % of snowmelt laterally, accumulating along the length of the slope, to increase the snow water equivalent by as much as 170 % at the base of a north-facing hillslope. Results from this study show that snow acts as an extension of the vadose zone during spring snowmelt and future hydrologic investigations will benefit from studying the snow and soil

  7. Conifer density within lake catchments predicts fish mercury concentrations in remote subalpine lakes

    Science.gov (United States)

    Eagles-Smith, Collin A.; Herring, Garth; Johnson, Branden L.; Graw, Rick

    2016-01-01

    Remote high-elevation lakes represent unique environments for evaluating the bioaccumulation of atmospherically deposited mercury through freshwater food webs, as well as for evaluating the relative importance of mercury loading versus landscape influences on mercury bioaccumulation. The increase in mercury deposition to these systems over the past century, coupled with their limited exposure to direct anthropogenic disturbance make them useful indicators for estimating how changes in mercury emissions may propagate to changes in Hg bioaccumulation and ecological risk. We evaluated mercury concentrations in resident fish from 28 high-elevation, sub-alpine lakes in the Pacific Northwest region of the United States. Fish total mercury (THg) concentrations ranged from 4 to 438 ng/g wet weight, with a geometric mean concentration (±standard error) of 43 ± 2 ng/g ww. Fish THg concentrations were negatively correlated with relative condition factor, indicating that faster growing fish that are in better condition have lower THg concentrations. Across the 28 study lakes, mean THg concentrations of resident salmonid fishes varied as much as 18-fold among lakes. We used a hierarchal statistical approach to evaluate the relative importance of physiological, limnological, and catchment drivers of fish Hg concentrations. Our top statistical model explained 87% of the variability in fish THg concentrations among lakes with four key landscape and limnological variables: catchment conifer density (basal area of conifers within a lake's catchment), lake surface area, aqueous dissolved sulfate, and dissolved organic carbon. Conifer density within a lake's catchment was the most important variable explaining fish THg concentrations across lakes, with THg concentrations differing by more than 400 percent across the forest density spectrum. These results illustrate the importance of landscape characteristics in controlling mercury bioaccumulation in fish.

  8. Calcium induces long-term legacy effects in a subalpine ecosystem.

    Directory of Open Access Journals (Sweden)

    Urs Schaffner

    Full Text Available Human activities have transformed a significant proportion of the world's land surface, with profound effects on ecosystem processes. Soil applications of macronutrients such as nitrate, phosphorus, potassium or calcium are routinely used in the management of croplands, grasslands and forests to improve plant health or increase productivity. However, while the effects of continuous fertilization and liming on terrestrial ecosystems are well documented, remarkably little is known about the legacy effect of historical fertilization and liming events in terrestrial ecosystems and of the mechanisms involved. Here, we show that more than 70 years after the last application of lime on a subalpine grassland, all major soil and plant calcium pools were still significantly larger in limed than in unlimed plots, and that the resulting shift in the soil calcium/aluminium ratio continues to affect ecosystem services such as primary production. The difference in the calcium content of the vegetation and the topmost 10 cm of the soil in limed vs. unlimed plots amounts to approximately 19.5 g m(-2, equivalent to 16.3% of the amount that was added to the plots some 70 years ago. In contrast, plots that were treated with nitrogen-phosphorus-potassium fertilizer in the 1930s did not differ from unfertilized plots in any of the soil and vegetation characteristics measured. Our findings suggest that the long-term legacy effect of historical liming is due to long-term storage of added calcium in stable soil pools, rather than a general increase in nutrient availability. Our results demonstrate that single applications of calcium in its carbonated form can profoundly and persistently alter ecosystem processes and services in mountain ecosystems.

  9. Net primary productivity of subalpine meadows in Yosemite National Park in relation to climate variability

    Science.gov (United States)

    Moore, Peggy E.; Van Wagtendonk, Jan W.; Yee, Julie L.; McClaran, Mitchel P.; Cole, David N.; McDougald, Neil K.; Brooks, Matthew L.

    2013-01-01

    Subalpine meadows are some of the most ecologically important components of mountain landscapes, and primary productivity is important to the maintenance of meadow functions. Understanding how changes in primary productivity are associated with variability in moisture and temperature will become increasingly important with current and anticipated changes in climate. Our objective was to describe patterns and variability in aboveground live vascular plant biomass in relation to climatic factors. We harvested aboveground biomass at peak growth from four 64-m2 plots each in xeric, mesic, and hydric meadows annually from 1994 to 2000. Data from nearby weather stations provided independent variables of spring snow water content, snow-free date, and thawing degree days for a cumulative index of available energy. We assembled these climatic variables into a set of mixed effects analysis of covariance models to evaluate their relationships with annual aboveground net primary productivity (ANPP), and we used an information theoretic approach to compare the quality of fit among candidate models. ANPP in the xeric meadow was negatively related to snow water content and thawing degree days and in the mesic meadow was negatively related to snow water content. Relationships between ANPP and these 2 covariates in the hydric meadow were not significant. Increasing snow water content may limit ANPP in these meadows if anaerobic conditions delay microbial activity and nutrient availability. Increased thawing degree days may limit ANPP in xeric meadows by prematurely depleting soil moisture. Large within-year variation of ANPP in the hydric meadow limited sensitivity to the climatic variables. These relationships suggest that, under projected warmer and drier conditions, ANPP will increase in mesic meadows but remain unchanged in xeric meadows because declines associated with increased temperatures would offset the increases from decreased snow water content.

  10. Intraguild predation and cannibalism among larvae of detritivorous caddisflies in subalpine wetlands

    Science.gov (United States)

    Wissinger, S.A.; Sparks, G.B.; Rouse, G.L.; Brown, W.S.; Steltzer, Heidi

    1996-01-01

    Comparative data from subalpine wetlands in Colorado indicate that larvae of the limnephilid caddisflies, Asynarchus nigriculus and Limnephilus externus, are reciprocally abundant among habitats - Limnephilus larvae dominate in permanent waters, whereas Asynarchus larvae dominate in temporary basins. The purpose of this paper is to report on field and laboratory experiments that link this pattern of abundance to biotic interactions among larvae. In the first field experiment, growth and survival were compared in single and mixed species treatments in littoral enclosures. Larvae, which eat mainly vascular plant detritus, grew at similar rates among treatments in both temporary and permanent habitats suggesting that exploitative competition is not important under natural food levels and caddisfly densities. However, the survival of Limnephilus larvae was reduced in the presence of Asynarchus larvae. Subsequent behavioral studies in laboratory arenas revealed that Asynarchus larvae are extremely aggressive predators on Limnephilus larvae. In a second field experiment we manipulated the relative sizes of larvae and found that Limnephilus larvae were preyed on only when Asynarchus larvae had the same size advantage observed in natural populations. Our data suggest that the dominance of Asynarchus larvae in temporary habitats is due to asymmetric intraguild predation (IGP) facilitated by a phenological head start in development. These data do not explain the dominance of Limnephilus larvae in permanent basins, which we show elsewhere to be an indirect effect of salamander predation. Behavioral observations also revealed that Asynarchus larvae are cannibalistic. In contrast to the IGP on Limnephilus larvae, Asynarchus cannibalism occurs among same-sized larvae and often involves the mobbing of one victim by several conspecifics. In a third field experiment, we found that Asynarchus cannibalism was not density-dependent and occurred even at low larval densities. We

  11. A half century of change in alpine treeline patterns at Glacier National Park, Montana, U.S.A.

    Science.gov (United States)

    Klasner, F.L.; Fagre, D.B.

    2002-01-01

    Using sequential aerial photography, we identified changes in the spatial distribution of subalpine fir (Abies lasiocarpa) habitat at the alpine treeline ecotone. Six 40-ha study sites in the McDonald Creek drainage of Glacier National Park contained subalpine fir forests that graded into alpine tundra. Over a 46-yr period, altitudinal changes in the location of alpine treeline ecotone were not observed. However, over this 46-yr period the area of krummholz, patch-forest, and continuous canopy forest increased by 3.4%, and tree density increased within existing patches of krummholz and patch-forest. Change in subalpine fir vegetation patterns within 100 m of trails was also compared to areas without trails. Within 100 m of trails, the number of small, discrete krummholz stands increased compared to areas without trails, but there was no significant change in total krummholz area. We used historical terrestrial photography to expand the period (to 70 yr) considered. This photography supported the conclusions that a more abrupt ecotone transition developed from forest to tundra at alpine treeline, that tree density within forested areas increased, and that krummholz became fragmented along trails. This local assessment of fine-grained change in the alpine treeline ecotone provides a comparative base for looking at ecotone change in other mountain regions throughout the world.

  12. Declines in low-elevation subalpine tree populations outpace growth in high-elevation populations with warming

    Science.gov (United States)

    Conlisk, Erin; Castanha, Cristina; Germino, Matthew J.; Veblen, Thomas T; Smith, Jeremy M.; Kueppers, Lara M.

    2017-01-01

    Species distribution shifts in response to climate change require that recruitment increase beyond current range boundaries. For trees with long life spans, the importance of climate-sensitive seedling establishment to the pace of range shifts has not been demonstrated quantitatively.Using spatially explicit, stochastic population models combined with data from long-term forest surveys, we explored whether the climate-sensitivity of recruitment observed in climate manipulation experiments was sufficient to alter populations and elevation ranges of two widely distributed, high-elevation North American conifers.Empirically observed, warming-driven declines in recruitment led to rapid modelled population declines at the low-elevation, ‘warm edge’ of subalpine forest and slow emergence of populations beyond the high-elevation, ‘cool edge’. Because population declines in the forest occurred much faster than population emergence in the alpine, we observed range contraction for both species. For Engelmann spruce, this contraction was permanent over the modelled time horizon, even in the presence of increased moisture. For limber pine, lower sensitivity to warming may facilitate persistence at low elevations – especially in the presence of increased moisture – and rapid establishment above tree line, and, ultimately, expansion into the alpine.Synthesis. Assuming 21st century warming and no additional moisture, population dynamics in high-elevation forests led to transient range contractions for limber pine and potentially permanent range contractions for Engelmann spruce. Thus, limitations to seedling recruitment with warming can constrain the pace of subalpine tree range shifts.

  13. Nitrogen deposition but not ozone affects productivity and community composition of subalpine grassland after 3 yr of treatment.

    Science.gov (United States)

    Bassin, Seraina; Volk, Matthias; Suter, Matthias; Buchmann, Nina; Fuhrer, Jürg

    2007-01-01

    A field experiment was established at 2000 m above sea level (asl) in the central Swiss Alps with the aim of investigating the effects of elevated ozone (O(3)) and nitrogen deposition (N), and of their combination, on above-ground productivity and species composition of subalpine grassland. One hundred and eighty monoliths were extracted from a species-rich Geo-Montani-Nardetum pasture and exposed in a free-air O(3)-fumigation system to one of three concentrations of O(3) (ambient, 1.2 x ambient, 1.6 x ambient) and five concentrations of additional N. Above-ground biomass, proportion of functional groups and normalized difference vegetation index (NDVI) were measured annually. After 3 yr of treatment, the vegetation responded to the N input with an increase in above-ground productivity and altered species composition, but without changes resulting from elevated O(3). N input > 10 kg N ha(-1) yr(-1) was sufficient to affect the composition of functional groups, with sedges benefiting over-proportionally. No interaction of O(3) x N was observed, except for NDVI; positive effects of N addition on canopy greenness were counteracted by accelerated leaf senescence in the highest O(3) treatment. The results suggest that effects of elevated O(3) on the productivity and floristic composition of subalpine grassland may develop slowly, regardless of the sensitive response to increasing N.

  14. Effects of tourism and topography on vegetation diversity in the subalpine meadows of the Dongling Mountains of Beijing, China.

    Science.gov (United States)

    Zhang, Jin-Tun; Xiang, ChunLing; Li, Min

    2012-02-01

    Subalpine meadows in the Dongling Mountains (located at E115º26'-115º40', N40º00'-40º05') of Beijing, China are important for tourism and the provision of ecosystem services. However, because of poor management serious degradation has occurred on these subalpine meadows. The aim of this paper is to present a quantitative analysis of effects of tourism disturbance and topography on the status and diversity of montane meadow communities and to provide direction for improved management. Sixty quadrats of 2 × 2 m(2) along 10 transects were set up to collect data on site characteristics and vegetation status. The relationships between community composition and structure, species diversity, and tourism disturbance and topographic variables were analyzed by multivariate methods (TWINSPAN and CCA). The results showed that eight meadow communities were identified by TWINSPAN. Most of them were seriously degraded. The first CCA axis identified an elevation and tourism disturbance intensity gradient, which illustrated that tourism disturbance and elevation were most important factors influencing meadow types, composition and structure. Some resistant species and response species to tourism disturbance were identified and can be used as indicator species of tourism disturbance. Species richness, heterogeneity and evenness were closely related to tourism disturbance and elevation. It is concluded that tourism disturbance must be controlled to enable grassland rehabilitation to occur in the meadows. Measures of effective management of the meadows were discussed.

  15. Effects of Tourism and Topography on Vegetation Diversity in the Subalpine Meadows of the Dongling Mountains of Beijing, China

    Science.gov (United States)

    Zhang, Jin-Tun; Xiang, Chunling; Li, Min

    2012-02-01

    Subalpine meadows in the Dongling Mountains (located at E115º26'-115º40', N40º00'-40º05') of Beijing, China are important for tourism and the provision of ecosystem services. However, because of poor management serious degradation has occurred on these subalpine meadows. The aim of this paper is to present a quantitative analysis of effects of tourism disturbance and topography on the status and diversity of montane meadow communities and to provide direction for improved management. Sixty quadrats of 2 × 2 m2 along 10 transects were set up to collect data on site characteristics and vegetation status. The relationships between community composition and structure, species diversity, and tourism disturbance and topographic variables were analyzed by multivariate methods (TWINSPAN and CCA). The results showed that eight meadow communities were identified by TWINSPAN. Most of them were seriously degraded. The first CCA axis identified an elevation and tourism disturbance intensity gradient, which illustrated that tourism disturbance and elevation were most important factors influencing meadow types, composition and structure. Some resistant species and response species to tourism disturbance were identified and can be used as indicator species of tourism disturbance. Species richness, heterogeneity and evenness were closely related to tourism disturbance and elevation. It is concluded that tourism disturbance must be controlled to enable grassland rehabilitation to occur in the meadows. Measures of effective management of the meadows were discussed.

  16. FIR Detectors/Cameras Based on GaN and Si Field-Effect Devices Project

    Data.gov (United States)

    National Aeronautics and Space Administration — SETI proposes to develop GaN and Si based multicolor FIR/THz cameras with detector elements and readout, signal processing electronics integrated on a single chip....

  17. Ternary and Multi-Bit FIR Filter Area-Performance Tradeoffs in FPGA

    Directory of Open Access Journals (Sweden)

    Khalil-Ur-Rahman Dayo

    2013-01-01

    Full Text Available In this paper, performance and area of conventional FIR (Finite Impulse Responce filters versus ternary sigma delta modulated FIR filter is compared in FPGA (Field Programmable Gate Arrays using VHDL (Verilog Description Language. Two different approaches were designed and synthesized at same spectral performance by obtaining a TIR (Target Impulse Response. Both filters were synthesized on adaptive LUT (Look Up Table FPGA device in pipelined and non-pipelined modes. It is shown that the Ternary FIR filter occupies approximately the same area as the corresponding multi-bit filter, but for a given specification, the ternary FIR filter has 32% better performance in non-pipelined and 72% in pipelined mode, compared to its equivalent Multi-Bit filter at its optimum 12-bit coefficient quantization. These promising results shows that ternary logic based (i.e. +1,0,-1 filters can be used for huge chip area savings and higher performance.

  18. Active cancellation of acoustical resonances with an FPGA FIR filter

    Science.gov (United States)

    Ryou, Albert; Simon, Jonathan

    2017-01-01

    We present a novel approach to enhancing the bandwidth of a feedback-controlled mechanical system by digitally canceling acoustical resonances (poles) and anti-resonances (zeros) in the open-loop response via an FPGA FIR filter. By performing a real-time convolution of the feedback error signal with an inverse filter, we can suppress arbitrarily many poles and zeros below 100 kHz, each with a linewidth down to 10 Hz. We demonstrate the efficacy of this technique by canceling the ten largest mechanical resonances and anti-resonances of a high-finesse optical resonator, thereby enhancing the unity gain frequency by more than an order of magnitude. This approach is applicable to a broad array of stabilization problems including optical resonators, external cavity diode lasers, and scanning tunneling microscopes and points the way to applying modern optimal control techniques to intricate linear acoustical systems.

  19. Comparing Hyperion Lunar Observation with model calculations in support of GOES-R Advanced Baseline Imager (ABI) calibration

    Science.gov (United States)

    Shao, Xi; Cao, Changyong; Uprety, Sirish; Padula, Frank; Choi, Taeyoung

    2014-09-01

    Radiometric stability of the lunar surface and its smooth reflectance spectrum makes the moon an attractive candidate for calibrating satellite-based hyper/multi-band visible and infrared imagers. Long-term performance monitoring of satellite instrument using Moon can reveal the degradation of instruments. In this paper, analysis of Hyperion lunar observations and comparison with lunar model are performed in support of Cal/Val activities for satellite photometric imager such as GOES-R Advanced Baseline Imager (ABI) instrument. Hyperion makes hyper-spectral observations of the moon regularly with moon phase mostly at 7 degree and it covers visible and shirt-wavelength infrared (SWIR) channels with 10 nm spectral resolution. Five Hyperion lunar observations are analyzed. Lunar reflectance is derived from Hyperion observation and the mean absolute lunar spectral reflectance difference between Hyperion derivation and lunar model is 4.0 ± 2.62%. Through reflectance comparison, over-compensation of two strong atmospheric water absorption bands in Hyperion calibration is identified. The radiometric variance and degradation of Hyperion are assessed. To support the calibration of GOES-R ABI, hyper-spectral data of Hyperion lunar observation is convoluted with ABI spectral response functions for reflective solar bands to synthesize predicted lunar images to be observed by ABI. Lunar irradiances are derived from these synthesized lunar images for ABI and compared with lunar model predictions to quantify spectral biases. Long-term lunar imaging window of opportunities for GOES-R ABI are also assessed. The ability of using lunar model and Hyperion observation to calibrate satellite VNIR/SWIR sensors and reduce the measurement uncertainties is essential to support post-launch Cal/Val activities of GOES-R ABI.

  20. Lactococcal Abortive Infection Protein AbiV Interacts Directly with the Phage Protein SaV and Prevents Translation of Phage Proteins

    DEFF Research Database (Denmark)

    Haaber, Jakob Brandt Borup; Samson, J.E.; Labrie, S.J.

    2010-01-01

    RNAs and proteins suggested that AbiV blocks the activation of late gene transcription, probably by a general inhibition of translation. Using size exclusion chromatography coupled with on-line static light scattering and refractometry, as well as fluorescence quenching experiments, we also demonstrated that both......AbiV is an abortive infection protein that inhibits the lytic cycle of several virulent phages infecting Lactococcus lactis, while a mutation in the phage gene sav confers insensitivity to AbiV. In this study, we have further characterized the effects of the bacterial AbiV and its interaction...... with the phage p2 protein SaV. First, we showed that during phage infection of lactococcal AbiV(+) cells, AbiV rapidly inhibited protein synthesis. Among early phage transcripts, sav gene transcription was slightly inhibited while the SaV protein could not be detected. Analyses of other phage p2 m...

  1. Subalpine vegetation pattern three decades after stand-replacing fire: Effects of landscape context and topography on plant community composition, tree regeneration, and diversity

    Science.gov (United States)

    Jonathan D. Coop; Robert T. Massatti; Anna W. Schoettle

    2010-01-01

    These subalpine wildfires generated considerable, persistent increases in plant species richness at local and landscape scales, and a diversity of plant communities. The findings suggest that fire suppression in such systems must lead to reduced diversity. Concerns about post-fire invasion by exotic plants appear unwarranted in high-elevation wilderness settings.

  2. Verification of satellite radar remote sensing based estimates of boreal and subalpine growing seasons using an ecosystem process model and surface biophysical measurement network information

    Science.gov (United States)

    McDonald, K. C.; Kimball, J. S.; Zimmerman, R.

    2002-01-01

    We employ daily surface Radar backscatter data from the SeaWinds Ku-band Scatterometer onboard Quikscat to estimate landscape freeze-thaw state and associated length of the seasonal non-frozen period as a surrogate for determining the annual growing season across boreal and subalpine regions of North America for 2000 and 2001.

  3. Carex sempervirens tussocks induce spatial heterogeneity in litter decomposition, but not in soil properties, in a subalpine grassland in the Central Alps

    Science.gov (United States)

    Fei-Hai Yu; Martin Schutz; Deborah S. Page-Dumroese; Bertil O. Krusi; Jakob Schneller; Otto Wildi; Anita C. Risch

    2011-01-01

    Tussocks of graminoids can induce spatial heterogeneity in soil properties in dry areas with discontinuous vegetation cover, but little is known about the situation in areas with continuous vegetation and no study has tested whether tussocks can induce spatial heterogeneity in litter decomposition. In a subalpine grassland in the Central Alps where vegetation cover is...

  4. Deforestation induces shallow landsliding in the montane and subalpine belts of the Urbión Mountains, Iberian Range, Northern Spain

    Science.gov (United States)

    García-Ruiz, José M.; Beguería, Santiago; Arnáez, José; Sanjuán, Yasmina; Lana-Renault, Noemí; Gómez-Villar, Amelia; Álvarez-Martínez, Javier; Coba-Pérez, Paz

    2017-11-01

    In this study the spatial distribution of shallow landslides in the upper montane and subalpine belts of the Urbión Mountains (Iberian Range, northern Spain) was investigated, particularly in relation to the spatial organization of deforestation and land cover. The upper montane and subalpine belts have been deforested several times since the Neolithic Period, to enlarge the area of summer grasslands for feeding transhumant sheep flocks. Consequently, the timberline was lowered by 400-600 m, and increased the occurrence of severe erosion processes, particularly shallow landslides. This study shows that most of the landslide scars are in the summer grasslands area, and that a remarkable extent of the subalpine belt area has been subjected to mass movements. In addition to land use, the soil characteristics and topography help explain the development of conditions most favorable to landsliding. Shallow landslide susceptibility was highest in the upper parts of the slopes near the divides, in areas having slope gradients of 10-30° and deep soils with an increasing proportion of clay with depth. The landslides were clustered and not randomly distributed, and the causes of this spatial distribution are discussed. The current trend of woody encroachment in the upper montane and subalpine belts, resulting from decreasing livestock pressure, will probably reduce the susceptibility of these areas to shallow landslides in the future.

  5. Lab and Field Warming Similarly Advance Germination Date and Limit Germination Rate for High and Low Elevation Provenances of Two Widespread Subalpine Conifers

    Directory of Open Access Journals (Sweden)

    Lara M. Kueppers

    2017-11-01

    Full Text Available Accurately predicting upslope shifts in subalpine tree ranges with warming requires understanding how future forest populations will be affected by climate change, as these are the seed sources for new tree line and alpine populations. Early life history stages are particularly sensitive to climate and are also influenced by genetic variation among populations. We tested the climate sensitivity of germination and initial development for two widely distributed subalpine conifers, using controlled-environment growth chambers with one temperature regime from subalpine forest in the Colorado Rocky Mountains and one 5 °C warmer, and two soil moisture levels. We tracked germination rate and timing, rate of seedling development, and seedling morphology for two seed provenances separated by ~300 m elevation. Warming advanced germination timing and initial seedling development by a total of ~2 weeks, advances comparable to mean differences between provenances. Advances were similar for both provenances and species; however, warming reduced the overall germination rate, as did low soil moisture, only for Picea engelmannii. A three-year field warming and watering experiment planted with the same species and provenances yielded responses qualitatively consistent with the lab trials. Together these experiments indicate that in a warmer, drier climate, P. engelmannii germination, and thus regeneration, could decline, which could lead to declining subalpine forest populations, while Pinus flexilis forest populations could remain robust as a seed source for upslope range shifts.

  6. Early survival and growth of planted Douglas-fir with red alder in four mixed regimes.

    Science.gov (United States)

    Marshall D. Murray; Richard E. Miller

    1986-01-01

    To quantify between-species interactions, we measured and compared survival and growth of planted Douglas-fir and associated planted and volunteer red alder at a location on the west side of the Cascade Range in Washington. The planted alder were wildlings dug either from a nearby area or from a distant, coastal site and interplanted into a 3-year-old Douglas-fir...

  7. Relationships among environmental variables and distribution of tree species at high elevation in the Olympic Mountains

    Science.gov (United States)

    Woodward, Andrea

    1998-01-01

    Relationships among environmental variables and occurrence of tree species were investigated at Hurricane Ridge in Olympic National Park, Washington, USA. A transect consisting of three plots was established down one north-and one south-facing slope in stands representing the typical elevational sequence of tree species. Tree species included subalpine fir (Abies lasiocarpa), Douglas-fir (Pseudotsuga menziesii), mountain hemlock (Tsuga mertensiana), and Pacific silver fir (Abies amabilis). Air and soil temperature, precipitation, and soil moisture were measured during three growing seasons. Snowmelt patterns, soil carbon and moisture release curves were also determined. The plots represented a wide range in soil water potential, a major determinant of tree species distribution (range of minimum values = -1.1 to -8.0 MPa for Pacific silver fir and Douglas-fir plots, respectively). Precipitation intercepted at plots depended on topographic location, storm direction and storm type. Differences in soil moisture among plots was related to soil properties, while annual differences at each plot were most often related to early season precipitation. Changes in climate due to a doubling of atmospheric CO2 will likely shift tree species distributions within, but not among aspects. Change will be buffered by innate tolerance of adult trees and the inertia of soil properties.

  8. Non-compressible ABIs are associated with an increased risk of major amputation and major adverse cardiovascular events in patients with critical limb ischemia.

    Science.gov (United States)

    Singh, Gagan D; Armstrong, Ehrin J; Waldo, Stephen W; Alvandi, Bejan; Brinza, Ellen; Hildebrand, Justin; Amsterdam, Ezra A; Humphries, Misty D; Laird, John R

    2017-06-01

    Ankle-brachial indices (ABIs) are important for the assessment of disease burden among patients with peripheral artery disease. Although low values have been associated with adverse clinical outcomes, the association between non-compressible ABI (ncABI) and clinical outcome has not been evaluated among patients with critical limb ischemia (CLI). The present study sought to compare the clinical characteristics, angiographic findings and clinical outcomes of those with compressible (cABI) and ncABI among patients with CLI. Consecutive patients undergoing endovascular evaluation for CLI between 2006 and 2013 were included in a single center cohort. Major adverse cardiovascular events (MACE) were then compared between the two groups. Among 284 patients with CLI, 68 (24%) had ncABIs. These patients were more likely to have coronary artery disease ( p=0.003), diabetes ( pcABI. Rates of infrapopliteal disease were similar between the two groups ( p=0.10), though patients with ncABI had lower rates of iliac ( p=0.004) or femoropopliteal stenosis ( p=0.003). Infrapopliteal vessels had smaller diameters ( p=0.01) with longer lesions ( p=0.05) among patients with ncABIs. After 3 years of follow-up, ncABIs were associated with increased rates of mortality (HR 1.75, 95% CI: 1.12-2.78), MACE (HR 2.04, 95% CI: 1.35-3.03) and major amputation (HR 1.96, 95% CI: 1.11-3.45) when compared to patients with cABIs. In conclusion, ncABIs are associated with higher rates of mortality and adverse events among those undergoing endovascular therapy for CLI.

  9. Carbon assimilation, translocation and respiration in Fagus sylvatica and Abies alba stands measured by gas exchange and isotopic techniques during two contrasting climatic years

    Science.gov (United States)

    Gavrichkova, Olga; Scartazza, Andrea; Zampedri, Roberto; Cavagna, Mauro; Sottocornola, Matteo; Matteucci, Giorgio; Brugnoli, Enrico

    2014-05-01

    Global warming is tremendously influencing the climate of mountain areas through constantly rising temperatures and changes in local hydrological cycle. Increase of precipitation extremes, seasonal shifts of rainfall regime, heat waves are becoming more and more frequent events here. Vulnerability and plasticity of the local individual tree species under changing climate has still to be evaluated under field conditions. Two consecutive years, 2012 and 2013 were quite distinct in the climatic conditions during the plant growing season. Summer 2012 was characterized by a prolonged summer drought with almost no precipitation in central Italy from the end of May up to the end of August. The situation was aggravated by a very dry winter during this year. Mean annual temperatures in 2012 were 2oC higher in respect to the temperatures measured in the last 10 years. Conversely, year 2013 was milder with occasional rain events also during the summer months and temperatures close to the average values. In the Alpine zone the difference between two years were less pronounced with 2012 being slightly warmer than average and 2013 was characterized by unusually abundant spring precipitations. Taking advantage of these two contrasting years, we have monitored a functional response of one deciduous and one coniferous mountain forest stands growing in different mountain climate zones to variations in the local climate. The first, a deciduous European beech (Fagus sylvatica) forest, is located in the Appennine region of Italy at 1700 m height (Collelongo site, AQ) and characterized by a Mountain-Mediterranean climate. The second is a mixed forest dominated by Silver fir (Abies alba) which was chosen as a target species for our study. The site is located at 1350m height in the south-eastern Alps (Lavarone, TN) and is characterized by a mountain temperate climate. Sampling of plant material and point flux measurements were performed in the beginning, middle and the end of the growing

  10. Identification of varieties and gene flow in Douglas fir exemplified in artificially established stands in Germany

    Directory of Open Access Journals (Sweden)

    Barbara Fussi

    2013-12-01

    Full Text Available Douglas-fir [Pseudotsuga menziesii (Mirb. Franco] is an economically valuable non-native tree species in Germany and is considered very promising in view of global climate change. Therefore, the genetic characterization of Douglas-fir populations and seed stands in Germany is essential. We studied coastal and interior Douglas-fir varieties, both present in Germany, by using eleven isoenzyme and four microsatellite loci. By analyzing eight reference populations of known origin we were able to identify the two varieties on the population level using Bayesian and distance based methods. Seven populations present in Bavaria were then successfully assigned to one of the two varieties. Within varieties we found stronger grouping within the interior variety than within the coastal one. Despite lower differences within coastal Douglas-fir we have first indications for the origin of two populations. For two Bavarian populations, natural regeneration was included and genetic data revealed no significant genetic difference between adults and offspring. The parentage analysis for one of the studied stands revealed that a large proportion of adults took part in the reproduction, but some trees were more successful than others in transferring their genes to the next generation. Our study was able to improve variety identification of Douglas-fir using isoenzyme markers and nuclear microsatellites and study reproductive patterns, both are important issues for the management of Douglas-fir stands in Bavaria.

  11. Monsoon Season Moisture Deficit Limits Growth in Co-Occurring Alpine Shrub (Cassiope fastigata) and Tree (Abies spectabilis) Species in the Central Himalayas, Nepal

    Science.gov (United States)

    Rayback, S. A.; Shrestha, K. B.; Hofgaard, A.

    2015-12-01

    Recent evidence indicates changing climatological conditions in the Nepalese Himalayas including decreasing precipitation, a weakening Indian monsoon and rising temperatures. Trees and shrubs found at treeline are considered to be highly sensitive to climate, but the climatic effects on these ecotone species in the Himalayas are not well understood. Dendrochronological techniques applied to co-occurring shrubs and trees up-and down-slope of treeline extend our understanding of vegetation response at range margins and into tree-less environments. We developed tree-ring width and annual height increment chronologies for Abies spectabilis (Himalayan fir) and the first annual growth increment and annual production of leaves chronologies for Cassiope fastigata (Himalayan heather) at a high elevation site in central Nepal. C. fastigata chronologies showed moisture availability in late pre-monsoon and monsoon seasons of the previous year are critical to stem elongation and leaf production (AGI and previous May-August SPEI-12, r = 0.790; LEAF and previous June-September SPEI-12, r = 0.708) A. spectabilis chronologies were significantly and negatively correlated with monsoon season temperature during the current year (tree-ring width and June mean temperature, r = -0.677; height-increment and Sept maximum temperature, r = -0.605). In addition to both long-term and recent declines in moisture in the Himalayas, moisture deficit may be further exacerbated at high elevation sites via run-off and higher levels of evapotranspiration resulting in growth reductions, dieback and even death of these species. These results highlight that not all mid-latitude, high elevation treelines are limited by temperature as previously thought and that severe drought stress may initiate downslope treeline retraction. Understanding the response of co-occurring tree and shrub species to climate, now and in the future, may help to elucidate the physiological mechanisms controlling local and

  12. The Acoustic Breathiness Index (ABI): A Multivariate Acoustic Model for Breathiness.

    Science.gov (United States)

    Barsties V Latoszek, Ben; Maryn, Youri; Gerrits, Ellen; De Bodt, Marc

    2017-07-01

    The evaluation of voice quality is a major component of voice assessment. The aim of the present study was to develop a new multivariate acoustic model for the evaluation of breathiness. Concatenated voice samples of continuous speech and the sustained vowel [a:] from 970 subjects with dysphonia and 88 vocally healthy subjects were perceptually judged for breathiness severity. Acoustic analyses were conducted on the same concatenated voice samples after removal of the non-voiced segments of the continuous speech sample. The development of an acoustic model for breathiness was based on stepwise multiple linear regression analysis. Concurrent validity, diagnostic accuracy, and cross validation were statistically verified on the basis of the Spearman rank-order correlation coefficient (r s ), several estimates of the receiver operating characteristics plus the likelihood ratio, and iterated internal cross correlations. Ratings of breathiness from four experts with moderate reliability were used. Stepwise multiple regression analysis yielded a nine-variable acoustic model for the multiparametric measurement of breathiness (Acoustic Breathiness Index [ABI]). A strong correlation was found between ABI and auditory-perceptual rating (r s  = 0.840, P = 0.000). The cross correlations confirmed a comparably high degree of association. Additionally, the receiver operating characteristics and likelihood ratio results showed the best diagnostic outcome at a threshold of ABI = 3.44 with a sensitivity of 82.4% and a specificity of 92.9%. This study developed a new acoustic multivariate correlate for the evaluation of breathiness in voice. The ABI model showed valid and robust results and is therefore proposed as a new acoustic index for the evaluation of breathiness. Copyright © 2017 The Voice Foundation. Published by Elsevier Inc. All rights reserved.

  13. Increased antitumor activity, intratumor paclitaxel concentrations, and endothelial cell transport of cremophor-free, albumin-bound paclitaxel, ABI-007, compared with cremophor-based paclitaxel

    National Research Council Canada - National Science Library

    Neil Desai; Vuong Trieu; Zhiwen Yao; Leslie Louie; Sherry Ci; Andrew Yang; Chunlin Tao; Tapas De; Bridget Beals; Donald Dykes; Patricia Noker; Rosie Yao; Elizabeth Labao; Michael Hawkins; Patrick Soon-Shiong

    2006-01-01

    ...) and to exploit albumin receptor-mediated endothelial transport. We studied the antitumor activity, intratumoral paclitaxel accumulation, and endothelial transport for ABI-007 and Cremophor-based paclitaxel...

  14. Effects of irrigation, fertilization and drought on the occurrence of Lophodermium piceae in Picea abies needles

    Energy Technology Data Exchange (ETDEWEB)

    Lehtijaervi, Asko; Barklund, Pia [Swedish Univ. of Agricultural Sciences, Uppsala (Sweden). Dept. of Forest Mycology and Pathology

    1999-08-01

    Effects of irrigation, drought and fertilization on the frequency of the fungal endophyte Lophodermium piceae in green needles was assessed in a 30-year-old experimental stand of Picea abies in southern Sweden. Frequencies of needles with L. piceae were lower in irrigation and ammonium sulphate fertilization treatments than in the control. Drought treatment frequencies were similar to the control. Needles were susceptible to colonization for at least 3 years; colonization increased with needle age. The results indicate that the increased availability of water to the root system as well as ammonium sulphate fertilization indirectly delays colonization of needles by L. piceae 21 refs, 3 figs, 2 tabs

  15. Abibalsamins A and B, two new tetraterpenoids from Abies balsamea oleoresin.

    Science.gov (United States)

    Lavoie, Serge; Legault, Jean; Gauthier, Charles; Mshvildadze, Vakhtang; Mercier, Sylvain; Pichette, André

    2012-03-16

    Abibalsamins A (1) and B (2), two unprecedented tetraterpenoids featuring a 3,4-seco-rearranged lanostane system fused with a β-myrcene lateral chain via a [4 + 2] Diels-Alder cycloaddition, were isolated from the oleoresin of Abies balsamea. Their structures were elucidated by means of extensive 2D NMR, IR, and MS spectroscopy analyses. The absolute configuration of 1 was determined by single-crystal X-ray diffraction. Both compounds exhibited significant cytotoxic activity against cancer cell lines.

  16. The afterlife of antiquity and modern art: Aby Warburg on Manet

    Directory of Open Access Journals (Sweden)

    Dimitrios Latsis

    2015-12-01

    Full Text Available Aby Warburg’s manuscript on Édouard Manet – unpublished during his lifetime and presented here for the first time in English – constitutes one of his rare, substantial commentaries on nineteenth century art. Using “Le Déjeuner sur l’herbe” as a departure point, Warburg proceeds from his customary meticulous investigation of the central motif’s “visual archeology,” to a larger reflection on the evolution of the representation of nature in art and the image of antiquity that modernity has created for itself.

  17. FACTORES DE INFLUENCIA EN EL ENRAIZAMIENTO DE ESTACAS DE Abies religiosa (Kunth) Schltdl. et Cham

    OpenAIRE

    J. Daniel Castillo-Flores; Miguel A. López-López; Javier López-Upton; Víctor M. Cetina-Alcalá; Tomás Hernández-Tejeda

    2013-01-01

    La declinación forestal en el Desierto de los Leones, D. F. afecta a Abies religiosa, una de las especies dominantes en la región con difícil capacidad de enraizamiento que requiere propagación en la zona. En el presente estudio se desarrolló un método de propagación vegetativa con el fin de determinar si el efecto de la procedencia, edad del material, tipo de hormona y la presencia de síntomas de declinación, influyen en la capacidad de enraizamiento de estacas de dicha especie. En este expe...

  18. Importance of nitrogen cycling hot spots in an alpine-subalpine ecosystem

    Science.gov (United States)

    Darrouzet-Nardi, A.; Bowman, W. D.

    2009-12-01

    Nitrogen (N) availability in soils is influenced by many microbially catalyzed reactions such as N fixation, denitrification, and N mineralization from soil organic matter (SOM). Reaction rates for these processes are heterogeneous across landscapes, often forming hot spots that have disproportionately high N cycling activity. N cycling hot spots have been documented in many ecosystems at hourly to weekly times scales; however, much less is known about the persistence and importance of N cycling hot spots over longer times scales. Furthermore, few studies have investigated multiple landscape-level measurements of different N cycling processes at the same site. Using a mathematical definition of hot spots, a time series of short-term measurements, ion exchange resins deployed for one year, and nitrogen isotopic signatures in SOM, we investigated the importance of hot spots over longer time scales in a 0.89 km2 alpine-subalpine ecosystem at the Niwot Ridge LTER site. Measurements of KCl-extractable inorganic N taken on multiple measurement dates showed that hot moments of N availabilty occurred in some but not all parts of the study site and at varying times throughout the season. Ion exchange resins deployed for one year showed that N availability hot spots were important though not completely dominant over one year (14% of values accounted for 58% of total resin-extractable inorganic N observed). In contrast, isotopic signatures in 219 SOM samples were well approximated by a normal distribution, suggesting that landscape-level N losses through leaching or gas efflux were more constrained. Denitrification was the possible exception: we saw evidence for several likely hot spots in the wetland areas of our study site. The results of this study suggest that short-term hot spots are important for plant ecological dynamics at our study site and for denitrification, but that long-term N cycling hot spots are less important for other parts of the soil N cycle such as N

  19. Fuel deposition rates of montane and subalpine conifers in the central Sierra Nevada, California, USA

    Science.gov (United States)

    van Wagtendonk, J.W.; Moore, P.E.

    2010-01-01

    Fire managers and researchers need information on fuel deposition rates to estimate future changes in fuel bed characteristics, determine when forests transition to another fire behavior fuel model, estimate future changes in fuel bed characteristics, and parameterize and validate ecosystem process models. This information is lacking for many ecosystems including the Sierra Nevada in California, USA. We investigated fuel deposition rates and stand characteristics of seven montane and four subalpine conifers in the Sierra Nevada. We collected foliage, miscellaneous bark and crown fragments, cones, and woody fuel classes from four replicate plots each in four stem diameter size classes for each species, for a total of 176 sampling sites. We used these data to develop predictive equations for each fuel class and diameter size class of each species based on stem and crown characteristics. There were consistent species and diameter class differences in the annual amount of foliage and fragments deposited. Foliage deposition rates ranged from just over 50 g m-2 year-1 in small diameter mountain hemlock stands to ???300 g m-2 year-1 for the three largest diameter classes of giant sequoia. The deposition rate for most woody fuel classes increased from the smallest diameter class stands to the largest diameter class stands. Woody fuel deposition rates varied among species as well. The rates for the smallest woody fuels ranged from 0.8 g m-2 year-1 for small diameter stands of Jeffrey pine to 126.9 g m-2 year-1 for very large diameter stands of mountain hemlock. Crown height and live crown ratio were the best predictors of fuel deposition rates for most fuel classes and species. Both characteristics reflect the amount of crown biomass including foliage and woody fuels. Relationships established in this study allow predictions of fuel loads to be made on a stand basis for each of these species under current and possible future conditions. These predictions can be used to

  20. Soil, plant, and transport influences on methane in a subalpine forest under high ultraviolet irradiance

    Directory of Open Access Journals (Sweden)

    D. Baer

    2009-07-01

    Full Text Available Recent studies have demonstrated direct methane emission from plant foliage under aerobic conditions, particularly under high ultraviolet (UV irradiance. We examined the potential importance of this phenomenon in a high-elevation conifer forest using micrometeorological techniques. Vertical profiles of methane and carbon dioxide in forest air were monitored every 2 h for 6 weeks in summer 2007. Day to day variability in above-canopy CH4 was high, with observed values in the range 1790 to 1910 nmol mol−1. High CH4 was correlated with high carbon monoxide and related to wind direction, consistent with pollutant transport from an urban area by a well-studied mountain-plain wind system. Soils were moderately dry during the study. Vertical gradients of CH4 were small but detectable day and night, both near the ground and within the vegetation canopy. Gradients near the ground were consistent with the forest soil being a net CH4 sink. Using scalar similarity with CO2, the magnitude of the summer soil CH4 sink was estimated at ~1.7 mg CH4 m−2 h−1, which is similar to other temperate forest upland soils. The high-elevation forest was naturally exposed to high UV irradiance under clear sky conditions, with observed peak UVB irradiance >2 W m−2. Gradients and means of CO2 within the canopy under daytime conditions showed net uptake of CO2 due to photosynthetic drawdown as expected. No evidence was found for a significant foliar CH4 source in the vegetation canopy, even under high UV conditions. While the possibility of a weak foliar source cannot be excluded given the observed soil sink, overall this subalpine forest was a net sink for atmospheric methane during the growing season.

  1. Ice duration, winter stratification, and mixing behavior of subalpine lakes in western Maine

    Science.gov (United States)

    Daly, J.; Adams, S.; Abrams, R.; Engel, B.

    2011-12-01

    The timing and duration of both winter and summer periods of stratification periods is not well known for subalpine ponds in the northeastern United States. The remote nature of many of these lakes precludes detailed manual monitoring during the winter and the visual identification of major ice phenological events. These lakes are associated with ecological niches at or near their local elevation maximum that may be at risk due to climate change; historic ice-out records for larger regional lakes indicates a significant trend toward earlier ice-out in response to climate warming. We are using low-cost data loggers to develop high-resolution records characterizing water temperature variability at multiple depths in fifteen lakes 600 - 1000 m elevation. These lakes are located along a 175 km transect in western Maine; most are along the Appalachian Trail. The loggers are recording sub-hourly water temperature and light at the surface, two meters depth, and the bottom of each lake. The timing and duration of winter stratification and ice cover on these lakes are determined by distinctive temperature patterns recorded by the data loggers. The onset of winter stratification is marked by the expected temperature inversion and a slowly increasing hypolimnetic temperature; ice-on follows and is represented by the transition from daily heating cycles to a steady temperature over several days as the ice freezes in around the near-surface logger and energy loss is accomplished through a phase change rather than a drop in temperature. Once the ice is established, temperatures recorded by the near-surface logger vary daily, and are frequently below freezing in response to changing air temperature. Evaluation of winter 2009-2011 records shows that the duration of winter stratification exceeds ice duration at nearly every site. The timing of the onset of stratification is nearly uniform across the study area within each year of data, suggesting a nearly simultaneous response to

  2. E3B1/ABI-1 Isoforms Are Down-Regulated in Cancers of Human Gastrointestinal Tract

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    Rafia A. Baba

    2012-01-01

    Full Text Available The expression of E3B1/ABI-1 protein and its role in cancer progression and prognosis are largely unknown in the majority of solid tumors. In this study, we examined the expression pattern of E3B1/ABI-1 protein in histologically confirmed cases of esophageal (squamous cell carcinoma and adenocarcinoma, gastro-esophageal junction, colorectal cancers and corresponding normal tissues freshly resected from a cohort of 135 patients, by Western Blotting and Immunofluorescence Staining. The protein is present in its phosphorylated form in cells and tissues. Depending on the extent of phosphorylation it is either present in hyper-phosphorylated (M. Wt. 72 kDa form or in hypo-phosphorylated form (M. Wt. 68 kDa and 65 kDa. A thorough analysis revealed that expression of E3B1/ABI-1 protein is significantly decreased in esophageal, gastro-esophageal junction and colorectal carcinomas irrespective of age, gender, dietary and smoking habits of the patients. The decrease in expression of E3B1/ABI-1 was consistently observed for all the three isoforms. However, the decrease in the expression of isoforms varied with different forms of cancers. Down-regulation of E3B1/ABI-1 expression in human carcinomas may play a critical role in tumor progression and in determining disease prognosis.

  3. Degradation of the ABA co-receptor ABI1 by PUB12/13 U-box E3 ligases

    Science.gov (United States)

    Kong, Lingyao; Cheng, Jinkui; Zhu, Yujuan; Ding, Yanglin; Meng, Jingjing; Chen, Zhizhong; Xie, Qi; Guo, Yan; Li, Jigang; Yang, Shuhua; Gong, Zhizhong

    2015-01-01

    Clade A protein phosphatase 2Cs (PP2Cs) are abscisic acid (ABA) co-receptors that block ABA signalling by inhibiting the downstream protein kinases. ABA signalling is activated after PP2Cs are inhibited by ABA-bound PYR/PYL/RCAR ABA receptors (PYLs) in Arabidopsis. However, whether these PP2Cs are regulated by other factors remains unknown. Here, we report that ABI1 (ABA-INSENSITIVE 1) can interact with the U-box E3 ligases PUB12 and PUB13, but is ubiquitinated only when it interacts with ABA receptors in an in vitro assay. A mutant form of ABI1-1 that is unable to interact with PYLs is more stable than the wild-type protein. Both ABI1 degradation and all tested ABA responses are reduced in pub12 pub13 mutants compared with the wild type. Introducing the abi1-3 loss-of-function mutation into pub12 pub13 mutant recovers the ABA-insensitive phenotypes of the pub12 pub13 mutant. We thus uncover an important regulatory mechanism for regulating ABI1 levels by PUB12 and PUB13. PMID:26482222

  4. Performance Evaluation of FIR Filter After Implementation on Different FPGA and SOC and Its Utilization in Communication and Network

    DEFF Research Database (Denmark)

    Pandey, Bishwajeet; Das, Bhagwan; Kaur, Amanpreet

    2017-01-01

    There are many areas of communication and network, which have open scope to use FIR filter. Therefore, energy efficient FIR filter will increase lifetime of network and FIR filter with less delay and latency will increase performance of network. In this work, we are going to design an FIR filter ...... provide by Xilinx. We transform that C code into HDL using Vivado HLS 2016.2 before power analysis on Vivado 2016.2. Ultrascale FPGA is generally used for packet processing in 100G networking and heterogeneous wireless infrastructure....

  5. The dependence of water potential in shoots of Picea abies on air and soil water status

    Directory of Open Access Journals (Sweden)

    A. Sellin

    Full Text Available Where there is sufficient water storage in the soil the water potential (Ψx in shoots of Norway spruce [Picea abies (L. Karst.] is strongly governed by the vapour pressure deficit of the atmosphere, while the mean minimum values of Ψx usually do not drop below –1.5 MPa under meteorological conditions in Estonia. If the base water potential (Ψb is above –0.62 MPa, the principal factor causing water deficiency in shoots of P. abies may be either limited soil water reserves or atmospheric evaporative demand depending on the current level of the vapour pressure deficit. As the soil dries the stomatal control becomes more efficient in preventing water losses from the foliage, and the leaf water status, in turn, less sensitive to atmospheric demand. Under drought conditions, if Ψb falls below –0.62 MPa, the trees' water stress is mainly caused by low soil water availability. Further declines in the shoot water potential (below –1.5 MPa can be attributed primarily to further decreases in the soil water, i.e. to the static water stress.Key words. Hydrology (evapotranspiration · plant ecology · soil moisture.

  6. Fine roots in stands of Fagus sylvatica and Picea abies along a gradient of soil acidification

    Energy Technology Data Exchange (ETDEWEB)

    Braun, Sabine [Institute for Applied Plant Biology, Sandgrubenstrasse 25/27, 4124 Schoenenbuch (Switzerland)]. E-mail: sabine.braun@iap.ch; Cantaluppi, Leonardo [Institute for Applied Plant Biology, Sandgrubenstrasse 25/27, 4124 Schoenenbuch (Switzerland); Flueckiger, Walter [Institute for Applied Plant Biology, Sandgrubenstrasse 25/27, 4124 Schoenenbuch (Switzerland)

    2005-10-15

    Root length of naturally grown young beech trees (Fagus sylvatica L.) was investigated in 26 forest plots of differing base saturation and nitrogen deposition. The relative length of finest roots (<0.25 mm) was found to decrease in soils with low base saturation. A similar reduction of finest roots in plots with high nitrogen deposition was masked by the effect of base saturation. The formation of adventitious roots was enhanced in acidic soils. The analysis of 128 soil profiles for fine roots of all species present in stands of either Fagus sylvatica L., Picea abies [Karst.] L. or both showed a decreased rooting depth in soils with {<=}20% base saturation and in hydromorphic soils. For base rich, well drained soils an average rooting depth of 108 cm was found. This decreased by 28 cm on acidic, well drained soils. The results suggest an effect of the current soil acidification in Switzerland and possibly also of nitrogen deposition on the fine root systems of forest trees. - Fine root length of Fagus sylvatica and fine root depth in stands of Fagus sylvatica and/or Picea abies were impaired in soils with low base saturation.

  7. The Andalusian Bipolar Family (ABiF) Study: Protocol and sample description.

    Science.gov (United States)

    Guzman-Parra, Jose; Rivas, Fabio; Strohmaier, Jana; Forstner, Andreas; Streit, Fabian; Auburger, Georg; Propping, Peter; Orozco-Diaz, Guillermo; González, Maria José; Gil-Flores, Susana; Cabaleiro-Fabeiro, Francisco Javier; Del Río-Noriega, Francisco; Perez-Perez, Fermin; Haro-González, Jesus; de Diego-Otero, Yolanda; Romero-Sanchiz, Pablo; Moreno-Küstner, Berta; Cichon, Sven; Nöthen, Markus M; Rietschel, Marcella; Mayoral, Fermin

    2017-06-12

    Here, we present the first description of the Andalusian Bipolar Family (ABiF) Study. This longitudinal investigation of families from Andalusia, Spain commenced in 1997 with the aim of elucidating the molecular genetic causes of bipolar affective disorder. The cohort has since contributed to a number of key genetic findings, as reported in international journals. However, insight into the genetic underpinnings of the disorder in these families remains limited. In the initial 1997-2003 study phase, 100 multiplex bipolar disorder and other mood disorder families were recruited. The ongoing second phase of the project commenced in 2013, and involves follow-up of a subgroup of the originally recruited families. The aim of the follow-up investigation is to generate: i) longitudinal clinical data; ii) results from detailed neuropsychological assessments; and iii) a more extensive collection of biomaterials for future molecular biological studies. The ABiF Study will thus generate a valuable resource for future investigations into the aetiology of bipolar affective disorder; in particular the causes of high disease loading within multiply affected families. We discuss the value of this approach in terms of new technologies for the identification of high-penetrance genetic factors. These new technologies include exome and whole genome sequencing, and the use of induced pluripotent stem cells or model organisms to determine functional consequences. Copyright © 2017 SEP y SEPB. Publicado por Elsevier España, S.L.U. All rights reserved.

  8. Worm infestations and development of autoimmunity in children - The ABIS study.

    Directory of Open Access Journals (Sweden)

    Johnny Ludvigsson

    Full Text Available Worm infestations influence the immune system and may therefore decrease the risk for autoimmune diseases. The aim of the study was to determine whether children who have developed autoimmune disease were less likely to have had worm infestations in childhood. The ABIS-study is a prospective population-based cohort study of children born in southeast Sweden 1997/99. 17.055 children participated. As of June 2014 116 individuals had developed Type 1 diabetes, 181 celiac disease, and 53 Juvenile Rheumatoid Arthritis. The parents answered questions on worm infestations when the children were 1, 5 and 8 years of age. The ABIS registry was connected to the National Registry of Drug Prescriptions, and national registries for diagnosis of the studied diseases. We found no differences in incidence of worm infestations at 1, 5 or 8 years of age between children who developed autoimmune disease(s or healthy controls. At 8 years in total 20.0% of the general child population had experienced a worm infestation; children who developed Type 1 diabetes, 21,3%, celiac disease 19,5% and JRA 18,8%. There was no difference in prescriptions of drugs for treatment of worm infestations between those who had and who had not developed Type 1 diabetes, celiac disease, Juvenile Rheumatoid Arthritis. We found no associations indicating that worm infestations in childhood does not play a role in the development of autoimmune diseases in Sweden.

  9. Simulation of GOES-R ABI aerosol radiances using WRF-CMAQ: a case study approach

    Science.gov (United States)

    Christopher, S. A.

    2014-04-01

    In anticipation of the upcoming GOES-R launch we simulate visible and near-infrared reflectances of the Advanced Baseline Imager (ABI) for cases of high aerosol loading containing regional haze and smoke over the eastern United States. The simulations are performed using the Weather Research and Forecasting (WRF), Sparse Matrix Operator Kernel Emissions (SMOKE), and Community Multiscale Air Quality (CMAQ) models. Geostationary, satellite-derived, biomass-burning emissions are also included as an input to CMAQ. Using the CMAQ aerosol concentrations and Mie calculations, radiance is computed from the discrete ordinate atmospheric radiative transfer model. We present detailed methods for deriving aerosol extinction from WRF and CMAQ outputs. Our results show that the model simulations create a realistic set of reflectances in various aerosol scenarios. The simulated reflectances provide distinct spectral features of aerosols which are then compared to data from the Moderate Resolution Imaging Spectroradiometer (MODIS). We also present a simple technique to synthesize green band reflectance (which will not be available on the ABI), using the model-simulated blue and red band reflectance. This study is an example of the use of air quality modeling in improving products and techniques for Earth-observing missions.

  10. The GOES-R ABI Fixed Grid Format: Overview and Case Study

    Science.gov (United States)

    Pogorzala, D.; Padula, F.; Cao, C.; Wu, X.

    2014-12-01

    The Advanced Baseline Imager (ABI) aboard the Geostationary Operational Environmental Satellite-R series (GOES-R) will image Earth in 16 spectral channels at channel-specific resolutions of 0.5, 1.0 and 2.0 km. All Level-1b and Level-2+ products created by ABI will be geometrically interpolated to a Fixed Grid; a set of static pixel locations centered on the sub-satellite point. The Fixed Grid represents a new standard in products created by the GOES series of satellites and will aid users by providing continuity in the locations of geographic features throughout mission life. However, detector-level anomalies will be impacted by the resampling process in a variety of ways. Depending on the nature of the anomaly, the proximity of the detector sample to the pixel centers, and the underlying scene phenomenology, the resampling process has the potential to both amplify and mitigate system anomalies. This work will introduce the resampling process and the Fixed Grid, as well as present a case study characterizing the radiometric impacts of detector anomalies to L1b products.

  11. After a child's acquired brain injury (ABI): An ethnographic study of being a parent.

    Science.gov (United States)

    Rashid, Marghalara; Goez, Helly R; Caine, Vera; Yager, Jerome Y; Joyce, Anthony S; Newton, Amanda S

    2016-11-30

    To explore the meanings associated with being a parent of a child with an aquired brain injury (ABI). An ethnographic study was conducted with parents of children aged 3 to 10 years who had acquired a severe brain injury. Purposeful sampling was used to recruit parents from the Glenrose Rehabilitation Hospital in Edmonton, Alberta. Data collection involved participant observation, fieldwork and semi-structured interviews. Field notes and interviews transcriptions were analysed using a thematic analysis framework and informed by symbolic interactionism theory. Six parent dyads (mothers and fathers) and 4 mothers participated in the study.Parents' meanings of `parenting' a child with severe brain injury were shaped by the injury, wide range of familial dynamics, and interactions. Six main themes related to parental meanings emerged from our data: (1) Getting `back to normal'; (2) Relying on a support system; (3) Worrying something bad may happen after the injury; (4) Going through a range of emotions following the injury; (5) Changing family dynamics after the injury; and (6) Ongoing performativity. Parents' meanings of `parenting' a child are extensively impacted by their child's functioning after the ABI. Having a greater appreciation of these experiences may be beneficial for medical professionals.

  12. The Andean Biotic Index (ABI: revised tolerance to pollution values for macroinvertebrate families and index performance evaluation

    Directory of Open Access Journals (Sweden)

    Blanca Ríos-Touma

    2014-04-01

    Full Text Available Score-based biotic indices are widely used to evaluate the water quality of streams and rivers. Few adaptations of these indices have been done for South America because there is a lack of knowledge on macroinvertebrate taxonomy, distribution and tolerance to pollution in the region. Several areas in the Andes are densely populated and there is need for methods to assess the impact of increasing human pressures on aquatic ecosystems. Considering the unique ecological and geographical features of the Andes, macroinvertebrate indices used in other regions must be adapted with caution. Here we present a review of the literature on macroinvertebrate distribution and tolerance to pollution in Andean areas above 2 000masl. Using these data, we propose an Andean Biotic Index (ABI, which is based on the BMWP index. In general, ABI includes fewer macroinvertebrate families than in other regions of the world where the BMWP index has been applied because altitude restricts the distribution of several families. Our review shows that in the high Andes, the tolerance of several macroinvertebrate families to pollution differs from those reported in other areas. We tested the ABI index in two basins in Ecuador and Peru, and compared it to other BMWP adaptations using the reference condition approach. The ABI index is extremely useful for detecting the general impairment of rivers but class quality boundaries should be defined independently for each basin because reference conditions may be different. The ABI is widely used in Ecuador and Peru, with high correlations with land-use pressures in several studies. The ABI index is an integral part of the new multimetric index designed for high Andean streams (IMEERA. Rev. Biol. Trop. 62 (Suppl. 2: 249-273. Epub 2014 April 01.

  13. The Andean Biotic Index (ABI): revised tolerance to pollution values for macroinvertebrate families and index performance evaluation.

    Science.gov (United States)

    Ríos-Touma, Blanca; Acosta, Raúl; Prat, Narcís

    2014-04-01

    Score-based biotic indices are widely used to evaluate the water quality of streams and rivers. Few adaptations of these indices have been done for South America because there is a lack of knowledge on macroinvertebrate taxonomy, distribution and tolerance to pollution in the region. Several areas in the Andes are densely populated and there is need for methods to assess the impact of increasing human pressures on aquatic ecosystems. Considering the unique ecological and geographical features of the Andes, macroinvertebrate indices used in other regions must be adapted with caution. Here we present a review of the literature on macroinvertebrate distribution and tolerance to pollution in Andean areas above 2,000 masl. Using these data, we propose an Andean Biotic Index (ABI), which is based on the BMWP index. In general, ABI includes fewer macroinvertebrate families than in other regions of the world where the BMWP index has been applied because altitude restricts the distribution of several families. Our review shows that in the high Andes, the tolerance of several macroinvertebrate families to pollution differs from those reported in other areas. We tested the ABI index in two basins in Ecuador and Peru, and compared it to other BMWP adaptations using the reference condition approach. The ABI index is extremely useful for detecting the general impairment of rivers but class quality boundaries should be defined independently for each basin because reference conditions may be different. The ABI is widely used in Ecuador and Peru, with high correlations with land-use pressures in several studies. The ABI index is an integral part of the new multimetric index designed for high Andean streams (IMEERA).

  14. Characterization of Atmospheric Nitrate Dynamics in a Sub-Alpine Watershed Using Δ17O and δ15N

    Science.gov (United States)

    Bourgeois, I.; Savarino, J. P.; Clement, J. C.

    2015-12-01

    Remote subalpine ecosystems are usually characterized by nutrient-poor soils (Körner, 2004; Seastedt et al., 2004), making them particularly susceptible to undergo changes due to increased atmospheric N deposition (Vitousek et al., 1997; Preunkert et al., 2003). Using Δ17O, a conserved tracer of atmospheric nitrate (NO3 atm) (Michalski et al., 2004; Tsunogai et al., 2010), and δ15N, indicator of NO3 biological sources (Kendall, 1998; Casciotti et al., 2009), we measured the seasonal variations of NO3 atm stable isotopic composition and concentration in several streams and soils originating from two sub-alpine watersheds in the French Alps. Our objective was to investigate whether or not NO3 atm impacts the soil N biogeochemical cycle by increasing nutrients availability for plants and bacteria. We coupled streams and soils measurements with snow-pits sampling and aerosols collection at the Lautaret Pass, to better emphasize the correlation between atmospheric deposition, soil retention and watersheds effluents response. Our results reveal that different temporal dynamics govern our study site: stream measurements show that in spring, snowmelt results in a NO3 atm impulse, accounting for ca. 31 % of the total stream NO3 budget; on the opposite in autumn, NO3 atm accounts only for ca. 3 % of the total stream NO3 budget, highlighting the presence of a NO3 bacterial pool (nitrification). We also inferred from the observed Δ17O variations two distinct phenomena in the spring/summer season: a fast snow run-off and a slower snow-water percolation. The later is believed to affect most the soil N cycle as it directly increases available NO3. Measured soil leachates and extracts confirm this hypothesis and point out the potential importance of anthropogenic N deposition as on average 7 to 10 % of the soil solutions NO3 derives directly from the atmosphere.

  15. Stand structure and regeneration of a mixed forest (Abies alba-Fagus sylvatica in the Central Pyrenees, Ordesa National Park, Spain

    Directory of Open Access Journals (Sweden)

    Doležal, J.

    2004-12-01

    Full Text Available The locations and biometrical characteristics of 2391 living and dead trees > 1.3 m tall of Abies alba and Fagus sylvatica, and the 378 understory shrubs o/Buxus sempervirens, were mapped in a 1.4 ha plot on the northern slope of Ordesa Valley to evaluate several hypotheses about stand structural development, tree species regeneration and coexistence. The plot is located in relatively undisturbed old-growth forest, but contains areas at low elevation which were formerly pasture. Abies is typically represented by many young trees and gradually declining numbers of trees in successively older size classes, whereas Fagus has greater numbers of trees in larger size and older age classes. This would imply a shift in dominance from beech to fir if the two species have similar mortality rates. We tested two hypotheses about the coexistence of ecologically similar species: (1 based on differentiation of regeneration niches, and (2 by means of different life history strategies (preference for survivorship or fecundity. Redundancy analysis (RDA was used to determine if the two species prefer different habitats. The analysis of spatial patterns and interspecific associations by Ripley's K-function was used to estimate the role of competition among trees in forest dynamics. The data provide empirical support for both tested hypotheses, although it has been shown that their importance varies depending on the degree of environmental heterogeneity along the slope across the plot. Different life history strategies appear critical to the success of coexistence in moderate environment at lower elevations, where co-dominant species have overlapping regeneration niches.

    [fr] Dans une parcelle de 1, 4 Ha au versant nord de la vallée d'Ordesa nous avons cartographie à petite échelle et pris des données biométriques sur 2391 hêtres (Fagus sylvatica et sapins (Abies alba vivants ou morts mais tous s'élevant à plus de 1,3 m, ainsi

  16. Pheno-anomalies of sub-alpine Vaccinium heaths in response to climatic variations

    Science.gov (United States)

    Puppi, Giovanna; Monti, Alessandra; Bonafede, Fausto; Vignodelli, Michele; Zanotti, Anna Letizia

    2014-05-01

    reduction in seed production and could have therefore be disadvantaged in turn-over. This hypothesis is consistent with the results on vegetation changes: in fact, the comparison of the actual vegetation with the historical observations in the same sites, shows a reduction of herb (Hemicryptophytes) diversity and cover in time. It is noteworthy that many of the declining species flower in the driest and hottest weeks of the year. In a climate-warming scenario, the low extension of these sub-alpine islands of the Apennines leads to a high extinction risk of the most sensible species. So, the monitoring of this vulnerable vegetation type seems necessary in order to detect the current trends and should be continued in the future. Puppi and Speranza 1980, Arch. Bot. Biogeogr. Ital. 56(3/4) Puppi et al. 1994, Fitosociologia 26: 63-79

  17. Impact of land use change on soil organic matter dynamics in subalpine grassland

    Science.gov (United States)

    Meyer, Stefanie; Leifeld, Jens; Bahn, Michael; Fuhrer, Jürg

    2010-05-01

    Information regarding the response of soil organic matter (SOM) in soils to past and expected future land use changes in the European Alps is scarce. Understanding this response requires knowledge of size and residence times of SOM fractions with distinct stabilities. In order to quantify differences between types of land use in the amount, distribution and turnover rates of soil organic carbon (SOC) in subalpine grassland soils, we used soil aggregate and SOM density fractionation in combination with 14C dating. Samples were taken along gradients of different types of land use from meadow (M) to pasture (P) and to abandoned grassland (A) in the Stubai Valley and in the Matsch Valley. Sampling sites in both areas were located at equal altitude (1880 m and 1820 m, respectively) with the same parent material and soil type, but the Matsch Valley receives 400-500 mm less annual rainfall. SOC stocks in the top 10 cm were 2.47 ± 0.32 (M), 2.75 ± 0.32 (P), and 2.50 ± 0.31 kg C/m2 (A) in the Stubai Valley and 2.25 ± 0.14 (M), 3.45 ± 0.22 (P), 3.16 ± 0.27 kg C/m2(A) in the Matsch Valley. Three aggregate size classes were separated by wet sieving: 2 mm. The light floating fraction (wPOM, ρ >1 g/cm3) was included in the analysis. Free (f-) and occluded particulate organic matter (oPOM) were isolated from each aggregate size class (ρ >1.6 g/cm3). At both locations, more than 80% of SOC was stored in small (0.25-2 mm) and large (>2 mm) macroaggregates, but no trend in relation to the different types of land use could be detected. The fraction of C in fPOM and in oPOM in all aggregate size classes was highest for soil from abandoned grasslands. The bulk soil of the abandoned site in the Stubai Valley showed a significantly higher share of fPOM-C and oPOM-C and a higher amount of wPOM-C as compared to the soil from managed grassland, whereas in the Matsch Valley pasture soil had a significantly higher wPOM-C content. At both sites, 13C natural abundance analyses revealed

  18. Autotrophic and Heterotrophic Controls over Winter Soil Carbon Cycling in a Subalpine Forest Ecosystem

    Science.gov (United States)

    Monson, R. K.; Scott-Denton, L. E.; Lipson, D. A.; Weintrub, M. N.; Rosenstiel, T. N.; Schmidt, S. K.; Williams, M. W.; Burns, S. P.; Delany, A. E.; Turnipseed, A. A.

    2005-12-01

    that interannual variation in winter ecosystem respiration is positively correlated to interannual variation in the spring snow depth. Years with a with a deeper spring snow pack exhibited higher soil temperatures, and concomitantly higher soil respiration rates. Given the recently reported decadal-scale trend in decreasing snow pack in the Western U.S., which is coupled to warm climate anomalies, our observations indicate the potential for higher wintertime soil carbon sequestration due to lower winter ecosystem respiration rates in subalpine forests. Our studies of processes beneath the winter snow pack demonstrate that contrary to previous assumptions, winter biogeochemical processing of soil organic matter is an important component of ecosystem carbon budgets. Despite low temperatures and an inactive plant rhizosphere, winter microbial communities and exoenzymes appear to be active, carbon substrates appear to be in relatively high abundance and soil respiration rates appear to be sensitive to seasonal and interannual winter climate variability.

  19. Use of passive UAS imaging to measure biophysical parameters in a southern Rocky Mountain subalpine forest

    Science.gov (United States)

    Caldwell, M. K.; Sloan, J.; Mladinich, C. S.; Wessman, C. A.

    2013-12-01

    Unmanned Aerial Systems (UAS) can provide detailed, fine spatial resolution imagery for ecological uses not otherwise obtainable through standard methods. The use of UAS imagery for ecology is a rapidly -evolving field, where the study of forest landscape ecology can be augmented using UAS imagery to scale and validate biophysical data from field measurements to spaceborne observations. High resolution imagery provided by UAS (30 cm2 pixels) offers detailed canopy cover and forest structure data in a time efficient and inexpensive manner. Using a GoPro Hero2 (2 mm focal length) camera mounted in the nose cone of a Raven unmanned system, we collected aerial and thermal data monthly during the summer 2013, over two subalpine forests in the Southern Rocky Mountains in Colorado. These forests are dominated by lodgepole pine (Pinus ponderosae) and have experienced insect-driven (primarily mountain pine beetle; MPB, Dendroctonus ponderosae) mortality. Objectives of this study include observations of forest health variables such as canopy water content (CWC) from thermal imagery and leaf area index (LAI), biomass and forest productivity from the Normalized Difference Vegetation Index (NDVI) from UAS imagery. Observations were, validated with ground measurements. Images were processed using a combination of AgiSoft Photoscan professional software and ENVI remote imaging software. We utilized the software Leaf Area Index Calculator (LAIC) developed by Córcoles et al. (2013) for calculating LAI from digital images and modified to conform to leaf area of needle-leaf trees as in Chen and Cihlar (1996) . LAIC uses a K-means cluster analysis to decipher the RGB levels for each pixel and distinguish between green aboveground vegetation and other materials, and project leaf area per unit of ground surface area (i.e. half total needle surface area per unit area). Preliminary LAIC UAS data shows summer average LAI was 3.8 in the most dense forest stands and 2.95 in less dense

  20. Fast Adaptive Blind MMSE Equalizer for Multichannel FIR Systems

    Directory of Open Access Journals (Sweden)

    Abed-Meraim Karim

    2006-01-01

    Full Text Available We propose a new blind minimum mean square error (MMSE equalization algorithm of noisy multichannel finite impulse response (FIR systems, that relies only on second-order statistics. The proposed algorithm offers two important advantages: a low computational complexity and a relative robustness against channel order overestimation errors. Exploiting the fact that the columns of the equalizer matrix filter belong both to the signal subspace and to the kernel of truncated data covariance matrix, the proposed algorithm achieves blindly a direct estimation of the zero-delay MMSE equalizer parameters. We develop a two-step procedure to further improve the performance gain and control the equalization delay. An efficient fast adaptive implementation of our equalizer, based on the projection approximation and the shift invariance property of temporal data covariance matrix, is proposed for reducing the computational complexity from to , where is the number of emitted signals, the data vector length, and the dimension of the signal subspace. We then derive a statistical performance analysis to compare the equalization performance with that of the optimal MMSE equalizer. Finally, simulation results are provided to illustrate the effectiveness of the proposed blind equalization algorithm.

  1. FIR Filter Sharpening by Frequency Masking and Pipelining-Interleaving Technique

    Directory of Open Access Journals (Sweden)

    CIRIC, M. P.

    2014-11-01

    Full Text Available This paper focuses on the improvements of digital filters with a highly sharp transition zone on the Xilinx FPGA chips by combining a sharpening method based on the amplitude change function and frequency masking and PI (Pipelining-Interleaving techniques. A linear phase requires digital filter realizations with Finite Impulse Response (FIR filters. On the other hand, a drawback of FIR filters applications is a low computational efficiency, especially in applications such as filter sharpening techniques, because this technique uses processing the data by repeated passes through the same filter. Computational efficiency of FIR filters can be significantly improved by using some of the multirate techniques, and such a degree of computation savings cannot be achieved in multirate implementations of IIR (Infinite Impulse Response filters. This paper shows the realization of a filter sharpening method with FIR filters combined with frequency masking and PI (Pipelining-Interleaving technique in order to effectively realize the filter with improved characteristic. This realization at the same time keeps the good features of FIR filters such as the linear phase characteristic.

  2. Repeated manual release in a young plantation: effect on Douglas-fir seedlings, hardwoods, shrubs, forbs, and grasses.

    Science.gov (United States)

    Philip M. McDonald; Gary O. Fiddler; Henry Harrison

    1994-01-01

    Douglas-fir seedlings on the Arcata Resource Area, Bureau of Land Management, U.S. Department of the Interior, in central coastal California, were released by chain sawing and grubbing competing vegetation around them at different frequencies (0, 2, and 3 grubbings) over a 5-year period. After 5 years, average Douglas-fir stem diameter (measured at 12 inches above mean...

  3. Douglas-fir ectomycorrhizae in 40- and 400-year-old stands: mycobiont availability to late successional western hemlock.

    Science.gov (United States)

    T. R. Horton; R. Molina; K. Hood

    2005-01-01

    We investigated ectomycorrhizal (EM) fungi in forest stands containing both early successional Douglas-fir and late successional western hemlock at two points in the typical stand development by identifying EM fungi from roots of Douglas-fir and western hemlock in mixed stands. Tn an early seral stage forest, EM roots of western hemlock seedlings and intermingling 40-...

  4. Flight periodicity of the Douglas-fir beetle, Dendroctonus pseudotsugae Hopkins (Coleoptera: Curculionidae: Scolytinae) in Colorado, U.S.A

    Science.gov (United States)

    Jose F. Negron; Willis C. Schaupp; Lee Pederson

    2011-01-01

    There are about 500 species of bark beetles (Coleoptera: Curculionidae: Scolytinae) in the United States (Wood 1982). A number of them are important disturbance agents in forested ecosystems, occasionally creating large tracts of dead trees. One eruptive species is the Douglas-fir beetle, Dendroctonus pseudotsugae Hopkins, which utilizes Douglas-fir, Pseudotsuga...

  5. An examination of the genetic control of Douglas-fir vascular tissue phytochemicals: implications for black bear foraging.

    Science.gov (United States)

    Bruce A. Kimball; G.R. Johnson; Dale L. Nolte; Doreen L. Griffin

    1999-01-01

    Silvicultural practices can influence black bear (Ursus americanus) foraging preferences for Douglas-fir (Pseudotsuga menziesii) cambial-zone vascular tissues, but little is known about the role of genetics. To study the impact of genetic selection, vascular tissue samples were collected from Douglas-fir trees in six half-sib families from five...

  6. Changes in wood product proportions in the Douglas-fir region with respect to size, age, and time.

    Science.gov (United States)

    R.A. Monserud; X. Zhou

    2007-01-01

    We examine both the variation and the changing proportions of different wood products obtained from trees and logs in the Douglas-fir region of the Northwestern United States. Analyses are based on a large product recovery database covering over 40 years of recovery studies; 13 studies are available for Douglas-fir (Pseudotsuga menziesii (Mirb.)...

  7. Tõendite kogumine välisriikides ning välisriigi kohtutele tõendite kogumiseks abi osutamine / Maarja Torga

    Index Scriptorium Estoniae

    Torga, Maarja, 1984-

    2017-01-01

    Rahvusvahelistest kokkulepetest tõendite rahvusvahelisel kogumisel ja tõendite rahvusvahelise kogumise eri režiimidest. Tõendite kogumisest välisriigis Eesti kohtumenetluses ja Eesti kohtute kohustustest välisriigi kohtutele tõendite kogumiseks abi osutamisel

  8. Initial fungal colonizer affects mass loss and fungal community development in Picea abies logs 6 yr after inoculation

    Science.gov (United States)

    Daniel L. Lindner; Rimvydas Vasaitis; Ariana Kubartova; Johan Allmer; Hanna Johannesson; Mark T. Banik; Jan. Stenlid

    2011-01-01

    Picea abies logs were inoculated with Resinicium bicolor, Fomitopsis pinicola or left un-inoculated and placed in an old-growth boreal forest. Mass loss and fungal community data were collected after 6 yr to test whether simplification of the fungal community via inoculation affects mass loss and fungal community development. Three...

  9. Estimating the relative nutrient uptake from different soil depths in Quercus robur, Fagus sylvatica and Picea abies

    DEFF Research Database (Denmark)

    Göransson, Hans; Wallander, Håkan; Ingerslev, Morten

    2006-01-01

    uptake capacity of Rb+ and NH4+ by these fine roots under standardized conditions in the laboratory. The study was performed in monocultures of oak (Quercus robur L.), European beech (Fagus sylvatica L.) and Norway spruce [Picea abies (L.) Karst.] on sandy soil in a tree species trial in Denmark...

  10. Nuevos genes reguladores de la tolerancia a estrés abiótico en Arabidopsis.

    OpenAIRE

    MARTÍNEZ MACÍAS, FÉLIX

    2015-01-01

    Martínez Macías, F. (2015). Nuevos genes reguladores de la tolerancia a estrés abiótico en Arabidopsis [Tesis doctoral no publicada]. Universitat Politècnica de València. doi:10.4995/Thesis/10251/48560. TESIS

  11. Koolieeliku hirmudega toimetulek kui oma probleemidega toimetuleku õppimine ja lähedaste abi selles / Merle Taimalu

    Index Scriptorium Estoniae

    Taimalu, Merle

    2001-01-01

    Eestis ja Soomes 1993-1994.a. läbi viidud ühisuurimusest laste turvalisuse kohta, kus üheks eesmärgiks oli välja selgitada, kuidas koolieelikud oma hirmudega toime tulevad ja kuivõrd nad saavad ja kasutavad lähedaste täiskasvanute abi

  12. CITOGENETICS EFFECTS INDUCED BY THE ASCORBIC ACID TREATMENT OF LARIX DECIDUA MILL. SSP. CARPATICA AND PICEA ABIES (L. KARST

    Directory of Open Access Journals (Sweden)

    Ioana Ieremia

    2006-08-01

    Full Text Available The paper present the influence of ascorbic acid upon the mitotic division of Larix decidua Mill ssp. carpatica and Picea abies (L. Karst. The treatment is applied of two variants, germinated seed in ascorbic acid (variantAand germinated seeds in disttilate water, than treated with ascorbic acid in 3 concentrations (variant B.

  13. Pest risk assessment of the importation into the United States of unprocessed Pinus and Abies logs from Mexico

    Science.gov (United States)

    B. M. Tkacz; H. H. Burdsall; G. A. DeNitto; A. Eglitis; J. B. Hanson; J. T. Kliejunas; W. E. Wallner; J. G. O`Brien; E. L. Smith

    1998-01-01

    The unmitigated pest risk potential for the importation of Pinus and Abies logs from all states of Mexico into the United States was assessed by estimating the probability and consequences of establishment of representative insects and pathogens of concern. Twenty-two individual pest risk assessments were prepared for Pinus logs, twelve dealing with insects and ten...

  14. Image Navigation and Registration Performance Assessment Evaluation Tools for GOES-R ABI and GLM

    Science.gov (United States)

    Houchin, Scott; Porter, Brian; Graybill, Justin; Slingerland, Philip

    2017-01-01

    The GOES-R Flight Project has developed an Image Navigation and Registration (INR) Performance Assessment Tool Set (IPATS) for measuring Advanced Baseline Imager (ABI) and Geostationary Lightning Mapper (GLM) INR performance metrics in the post-launch period for performance evaluation and long term monitoring. IPATS utilizes a modular algorithmic design to allow user selection of data processing sequences optimized for generation of each INR metric. This novel modular approach minimizes duplication of common processing elements, thereby maximizing code efficiency and speed. Fast processing is essential given the large number of sub-image registrations required to generate INR metrics for the many images produced over a 24 hour evaluation period. This paper describes the software design and implementation of IPATS and provides preliminary test results.

  15. An experimental study on the effects of exhaust gas on spruce (Picea abies L. Karst.)

    Energy Technology Data Exchange (ETDEWEB)

    Hautala, E.L.; Holopainen, J.; Kaerenlampi, L. [Kuopio Univ. (Finland). Dept. of Ecology and Environmental Science; Surakka, J.; Ruuskanen, J. [Kuopio Univ. (Finland). Dept. of Environmental Sciences

    1995-12-31

    Motor vehicle exhausts are significant contributors to air pollution. Besides fine particles and inorganic gases, like CO, SO{sub 2} and NO{sub x}, exhaust gas contains a large group of aromatic hydrocarbon compounds, many of which are phytotoxic. In field studies, exhausts are found to have both direct and indirect harmful effects on roadside plants. However, only few experimental studies have been made about the effects of exhaust gas emissions on coniferous trees. The aim of this study was to survey the effects of exhausts on spruce (Picea abies L. Karst.) in standardized conditions. The concentrations of major exhaust gas components in the chamber atmosphere were detected simultaneously. The effects of exhaust on epistomatal waxes of first-year spruce needles are described. (author)

  16. In vitro testing of defense reactions in zygotic and somatic embryos of Abies numidica

    Directory of Open Access Journals (Sweden)

    Jiří Hřib

    2011-01-01

    Full Text Available Defense of desiccated cotyledonary somatic embryos and mature zygotic embryos of Abies numidica was tested in vitro by dual cultures with tester, fungus Phaeolus schweinitzii. Both types of embryos expressed defense reactions manifested by inhibited growth of fungal tester towards the embryos. Mycelial growth was described by logistic sigmoid growth model with a single asymptote. Mutual comparisons of mycelial growth in presence of zygotic and somatic embryos showed significant differences in parameters of mycelium growth curves towards the embryos. Larger defense reactions were observed in zygotic embryos relative to somatic embryos and unlimited control cultivations without embryo. The possible role of auxin in the defense response of plant embryos is discussed.

  17. Sobre el caso Aby Warburg : La cura por el símbolo

    OpenAIRE

    Erbetta, Anahí E.; Morete, Amalia

    2015-01-01

    En el presente trabajo nos ocuparemos del caso del historiador de arte alemán Aby Warburg (1886-1929), reconocido por el estudio de la historia cultural a través de las artes visuales. Retiene nuestra atención desde una perspectiva psicoanalítica el desencadenamiento de una psicosis clínica a la edad de 52 años. Es internado en la clínica Bellevue, en Kreuzlingen, dirigida por el Dr. Binswanger, desde el año 1921 al año 1924. Si bien el motivo de internación reside en el riesgo de vida en que...

  18. In vitro fungistatic effects of natural coniferous resin from Norway spruce (Picea abies).

    Science.gov (United States)

    Rautio, M; Sipponen, A; Lohi, J; Lounatmaa, K; Koukila-Kähkölä, P; Laitinen, K

    2012-08-01

    Resins (rosin, pitch) are natural products of the coniferous trees and are antimicrobial against a wide range of microbes. The antifungal effectiveness of resin, purified from Norway spruce (Picea abies), was studied against human pathogenic fungi and yeasts with the agar plate diffusion tests and electron microscopy (EM). The fungistatic effect of these resin mixtures (resin salves) was tested against a set of Candida yeasts, dermatophytes, and opportunistic fungi. Transmission and scanning EM was done from samples of fungi (Trichophyton mentagrophytes). In agar diffusion tests, the resin was strongly antifungal against all dermatophytes tested, e.g., against all fungi of the genus Trichophyton, but it was not antifungal against the Candida yeasts or against the opportunistic fungi tested. According to EM, resin caused damages in the cell hyphae and cell wall structures. We conclude that, in the agar plate diffusion test, coniferous resins are strongly fungistatic against the dermatophytic fungi only.

  19. Growing trees on completed sanitary landfills. [Nyssa sylvatica, Picea abies, Ginkgo biloba

    Energy Technology Data Exchange (ETDEWEB)

    Leone, I.A.; Gilman, E.F.; Flower, F.B.

    1983-01-01

    A 10-year old completed landfill in New Jersey consisting of 9 m (depth) of refuse covered with 15-25 cm of soil was cleared of debris and vegetation and covered with 30 cm of subsoil and 15-25 cm of topsoil. Nineteen coniferous and broadleaved species were planted on the landfill and on a control site in 1975, and trees were maintained and growth and condition monitored over 4 years. On the basis of shoot length and stem area increase, the most successful of the surviving trees were Nyssa sylvatica, Picea abies and Ginkgo biloba, in decreasing order of tolerance. Tolerance of landfill conditions appeared to be greatest in those species with low water requirements, a slow growth rate, high acid tolerance and a shallow root system. (Refs. 11).

  20. Exploratory assessment of groundwater vulnerability to pollution in Abi, southeastern Nigeria, using geophysical and geological techniques.

    Science.gov (United States)

    Akpan, Anthony E; Ebong, Ebong D; Emeka, Chimezie N

    2015-04-01

    The geophysical-based integrated electrical conductivity (IEC) and the groundwater hydraulic confinement-overlying strata-depth to water table (GOD) techniques were used to assess vulnerability levels of aquifers and the extent of aquifer protection in Abi, Nigeria. The IEC indices was generated from constrained one dimensional (1D) inversion of vertical electrical sounding (VES) and two dimensional (2D) electrical resistivity tomography (ERT) data, acquired randomly in the area. The GOD indices were sourced from existing geologic data within the area. Results showed that IEC values vary from 2.0 S in the strongly protected areas. The GOD indices vary from vulnerable areas to 0.6 in the highly vulnerable areas. Thus, the groundwater resources in the area need to be properly managed for sustainability and such management practices have been suggested.

  1. Plantas asociadas a los bosques de Abies guatemalensis (Pinaceae del occidente de Guatemala

    Directory of Open Access Journals (Sweden)

    José Vicente Martínez Arévalo

    2013-03-01

    Full Text Available Hay una carencia de información detallada sobre la composición y estructura de las comunidades montanas guatemaltecas. El objetivo del estudio fue contribuir al conocimiento de la flora de bosques de abeto (Abies guatemalensis, para esto se hizo el levantamiento florístico en bosques de abeto del occidente de Guatemala. Se encontraron 119 especies, 92 géneros, 50 familias en cuatro divisiones. Las familias más numerosas fueron: Asteraceae, Poaceae, Rosaceae, Lamiaceae, Apiaceae y Solanaceae y los géneros más abundantes Salvia, Alchemilla y Bidens. Las especies se ubicaron en cuatro estratos, 33 en el herbáceo inferior, 49 en el herbáceo superior, 30 en arbustos y siete en árboles. Se hace énfasis en la contribución del estudio al conocimiento de la flora de bosques de A. guatemalensis y la necesidad de otros similares en los demás bosques de esta especie, que sirva para fomentar su conocimiento y conservación. Se consideraron seis grupos de distribución geográfica, el principal es del centro de México a Centroamérica con 67% de especies. Se realiza una comparación fitogeográfica y de composición florística, con otras áreas de Abies de Guatemala y México. Se propone que a pesar de haber familias y géneros comunes, que proporcionan la estructura general entre los bosques de abeto, se deben considerar las particularidades florísticas de cada área, en el manejo y conservación influidas por suelo, latitud y microclima.

  2. Genetic diversity of Norway spruce [Picea abies (L. Karst.] in Romanian Carpathians

    Directory of Open Access Journals (Sweden)

    Raul Gheorghe Radu

    2014-07-01

    Full Text Available The genetic diversity of Romanian most important coniferous tree species, the Norway spruce, was estimated by means of allozyme markers. A total of 695 adult trees sampled from eleven populations grouped in six mountainous areas in the Romanian Carpathians were analyzed. In three metapopulations (Maramureş, Postăvar and Parâng, to evaluate the influence of altitudinal gradient on genetic diversity, samples were collected from populations located at high and low altitude. At other location (ApuseniMountains we compared the narrow-crown biotype (Picea abies var. columnaris and the pyramidal crown biotype (Picea abies var. pyramidalis and explored the genetic structure of peat bog ecotype. By analyzing 7 enzyme systems and 12 enzyme coding loci, a total of 38 allelic variants have been detected. The mean value of polymorphic loci for the six sites was 86.1%, ranging between 83.3% and 91.7% and the mean expected heterozygosity was 0.115, resulting in a moderate level of genetic diversity. The highest genetic diversity (He = 0.134 was found in the narrow-crown spruce population. Apuseni metapopulation showed the highest genetic diversity (He = 0.125, being the most valuable for conservation of genetic resources. The small value of fixation index (FST = 0.009 indicates a low genetic differentiation between the six sites and AMOVA test revealed a very high level of genetic diversity within population (99%. Comparative analysis of genetic parameters showed small differences between high and low altitude populations at each site, probably due to the neutral character of the markers analyzed and the effect of gene flow between gradiental populations.

  3. Morphological defects in native Japanese fir trees around the Fukushima Daiichi Nuclear Power Plant.

    Science.gov (United States)

    Watanabe, Yoshito; Ichikawa, San'ei; Kubota, Masahide; Hoshino, Junko; Kubota, Yoshihisa; Maruyama, Kouichi; Fuma, Shoichi; Kawaguchi, Isao; Yoschenko, Vasyl I; Yoshida, Satoshi

    2015-08-28

    After the accident at the Fukushima Daiichi Nuclear Power Plant (F1NPP) in March 2011, much attention has been paid to the biological consequences of the released radionuclides into the surrounding area. We investigated the morphological changes in Japanese fir, a Japanese endemic native conifer, at locations near the F1NPP. Japanese fir populations near the F1NPP showed a significantly increased number of morphological defects, involving deletions of leader shoots of the main axis, compared to a control population far from the F1NPP. The frequency of the defects corresponded to the radioactive contamination levels of the observation sites. A significant increase in deletions of the leader shoots became apparent in those that elongated after the spring of 2012, a year after the accident. These results suggest possibility that the contamination by radionuclides contributed to the morphological defects in Japanese fir trees in the area near the F1NPP.

  4. Effect of stand edge on the natural regeneration of spruce, beech and Douglas-fir

    Directory of Open Access Journals (Sweden)

    Lumír Dobrovolný

    2012-01-01

    Full Text Available Our work aimed at studying the strategy of woody plants regeneration during the regeneration of a spruce stand with the admixture of beech and Douglas-fir by border cutting (NW-SE aspect on acidic sites of higher elevations in the Bohemian-Moravian Upland. Spruce is better adapted to bear shade than Douglas-fir. Nevertheless, in optimal light conditions up to a distance of ca. 35 m (about 16% DIFFSF from the stand edge, the Douglas-fir can put the spruce into danger as to height growth. By contrast to beech, the density of spruce is significantly higher within the distance of 45 m (about 15% DIFFSF from the stand edge but further on the situation would change to the benefit of beech. The density of Douglas-fir significantly dominates over beech within a distance of 35 m from the stand edge; from 55 m (less than 15% DIFFSF, the situation changes in favour of beech. Beech can survive in full shade deep in the stand core waiting for its opportunity to come. As compared to spruce and Douglas-fir, the height growth of beech was at all times significantly greater at a distance of 25 m from the stand edge. Converted to practical conditions, spruce and Douglas-fir with individually admixed beech seedlings showed good prosperity approximately up to a distance of one stand height from the edge. A mixture of spruce and beech did well at a greater distance but good prosperity at a distance of 2–3 stand heights was shown only by beech. Thus, border regeneration eliminates disadvantages of the climatic extremes of clear-cutting and specifics of shelterwood felling during which one – usually shade-tolerant tree species dominates in the natural regeneration (e.g. beech.

  5. Climate Change, Wildfires and Fir Forests in Greece: Perceptions of Forest Managers

    Directory of Open Access Journals (Sweden)

    Ioannis Mitsopoulos

    2015-05-01

    Full Text Available Background and Purpose: The potential impact that climate change may have on fire regime in ecosystems that are not fire-dependent emerges from fires that are nowadays spreading over higher altitudes and northern latitudes. The effects of fire occurrence in high elevation forests of Greece became apparent during the last few years when a number of large forest fires burned a significant number of high altitude fir ecosystems. This paper describes a study that investigated perceptions of wildfire risk to fir ecosystems of Greece in the context of climate change among a sample of Greek forestry experts by conducting personal interviews. Materials and Methods: A total of 63 forest experts answered the developed survey from 43 different forest management units covering all forestry agencies which manage fir forests in the country. The perceived fire risk and management to fir forest ecosystems was assessed by means of a subset of scales previously identified as relevant to climate change and to all fire management aspects, such as fire prevention, fire suppression and post fire treatments. Results: Increased fire risk was rated as a quite important issue in fir forests during the last few years, while the adapting options to climate change are not implemented mainly due to budget and personnel constrains. According to forest experts, fire prevention in fir forests under climate change should be focused on public awareness and fuel management. Nevertheless, the survey results indicate that there is also a need for specific fire prevention measures such as the type of logging activities and other technical measures. The result of this survey highlighted the need for the establishment of a new firefighting organization and for the better coordination of all involved parties during fire suppression. Conclusions: The findings of the current study can be critically important in determining how forest fire management considerations are incorporated into

  6. AbiV, a novel antiphage abortive infection mechanism on the chromosome of Lactococcus lactis subsp. cremoris MG1363.

    Science.gov (United States)

    Haaber, Jakob; Moineau, Sylvain; Fortier, Louis-Charles; Hammer, Karin

    2008-11-01

    Insertional mutagenesis with pGhost9::ISS1 resulted in independent insertions in a 350-bp region of the chromosome of Lactococcus lactis subsp. cremoris MG1363 that conferred phage resistance to the integrants. The orientation and location of the insertions suggested that the phage resistance phenotype was caused by a chromosomal gene turned on by a promoter from the inserted construct. Reverse transcription-PCR analysis confirmed that there were higher levels of transcription of a downstream open reading frame (ORF) in the phage-resistant integrants than in the phage-sensitive strain L. lactis MG1363. This gene was also found to confer phage resistance to L. lactis MG1363 when it was cloned into an expression vector. A subsequent frameshift mutation in the ORF completely eliminated the phage resistance phenotype, confirming that the ORF was necessary for phage resistance. This ORF provided resistance against virulent lactococcal phages belonging to the 936 and c2 species with an efficiency of plaquing of 10(-4), but it did not protect against members of the P335 species. A high level of expression of the ORF did not affect the cellular growth rate. Assays for phage adsorption, DNA ejection, restriction/modification activity, plaque size, phage DNA replication, and cell survival showed that the ORF encoded an abortive infection (Abi) mechanism. Sequence analysis revealed a deduced protein consisting of 201 amino acids which, in its native state, probably forms a dimer in the cytosol. Similarity searches revealed no homology to other phage resistance mechanisms, and thus, this novel Abi mechanism was designated AbiV. The mode of action of AbiV is unknown, but the activity of AbiV prevented cleavage of the replicated phage DNA of 936-like phages.

  7. Modified FIR thermometry for surface temperature sensing by using high power laser.

    Science.gov (United States)

    Wang, Ran; Zhang, Xinlu; Zhang, Zhilin; Zhong, Hujiang; Chen, Yujin; Zhao, Enming; Vasilescu, Steven; Liu, Lu

    2017-01-23

    The FIR (fluorescence intensity ratio) technique for optical thermometry has attracted considerable attention over recent years due to its high sensitivity and high spatial resolution. However, it is thought that a heating effect induced by incident light may lead to temperature overestimations, which in turn impedes the reliability of this technique for applications which require high levels of accuracy. To further improve the FIR technique, this paper presents a modified calibration expression, which is suitable for surface temperature sensing, based on the temperature distribution (calculated through COMSOL software). In addition, this modified method is verified by the experimental data.

  8. Identification and characterization of small non-coding RNAs from Chinese fir by high throughput sequencing

    Directory of Open Access Journals (Sweden)

    Wan Li-Chuan

    2012-08-01

    Full Text Available Abstract Background Small non-coding RNAs (sRNAs play key roles in plant development, growth and responses to biotic and abiotic stresses. At least four classes of sRNAs have been well characterized in plants, including repeat-associated siRNAs (rasiRNAs, microRNAs (miRNAs, trans-acting siRNAs (tasiRNAs and natural antisense transcript-derived siRNAs. Chinese fir (Cunninghamia lanceolata is one of the most important coniferous evergreen tree species in China. No sRNA from Chinese fir has been described to date. Results To obtain sRNAs in Chinese fir, we sequenced a sRNA library generated from seeds, seedlings, leaves, stems and calli, using Illumina high throughput sequencing technology. A comprehensive set of sRNAs were acquired, including conserved and novel miRNAs, rasiRNAs and tasiRNAs. With BLASTN and MIREAP we identified a total of 115 conserved miRNAs comprising 40 miRNA families and one novel miRNA with precursor sequence. The expressions of 16 conserved and one novel miRNAs and one tasiRNA were detected by RT-PCR. Utilizing real time RT-PCR, we revealed that four conserved and one novel miRNAs displayed developmental stage-specific expression patterns in Chinese fir. In addition, 209 unigenes were predicted to be targets of 30 Chinese fir miRNA families, of which five target genes were experimentally verified by 5' RACE, including a squamosa promoter-binding protein gene, a pentatricopeptide (PPR repeat-containing protein gene, a BolA-like family protein gene, AGO1 and a gene of unknown function. We also demonstrated that the DCL3-dependent rasiRNA biogenesis pathway, which had been considered absent in conifers, existed in Chinese fir. Furthermore, the miR390-TAS3-ARF regulatory pathway was elucidated. Conclusions We unveiled a complex population of sRNAs in Chinese fir through high throughput sequencing. This provides an insight into the composition and function of sRNAs in Chinese fir and sheds new light on land plant sRNA evolution.

  9. Gladiolus hybridus ABSCISIC ACID INSENSITIVE 5 (GhABI5) is an important transcription factor in ABA signaling that can enhance Gladiolus corm dormancy and Arabidopsis seed dormancy.

    Science.gov (United States)

    Wu, Jian; Seng, Shanshan; Sui, Juanjuan; Vonapartis, Eliana; Luo, Xian; Gong, Benhe; Liu, Chen; Wu, Chenyu; Liu, Chao; Zhang, Fengqin; He, Junna; Yi, Mingfang

    2015-01-01

    The phytohormone abscisic acid (ABA) regulates plant development and is crucial for abiotic stress response. In this study, cold storage contributes to reducing endogenous ABA content, resulting in dormancy breaking of Gladiolus. The ABA inhibitor fluridone also promotes germination, suggesting that ABA is an important hormone that regulates corm dormancy. Here, we report the identification and functional characterization of the Gladiolus ABI5 homolog (GhABI5), which is a basic leucine zipper motif transcriptional factor (TF). GhABI5 is expressed in dormant vegetative organs (corm, cormel, and stolon) as well as in reproductive organs (stamen), and it is up-regulated by ABA or drought. Complementation analysis reveals that GhABI5 rescues the ABA insensitivity of abi5-3 during seed germination and induces the expression of downstream ABA response genes in Arabidopsis thaliana (EM1, EM6, and RD29B). Down-regulation of GhABI5 in dormant cormels via virus induced gene silence promotes sprouting and reduces the expression of downstream genes (GhLEA and GhRD29B). The results of this study reveal that GhABI5 regulates bud dormancy (vegetative organ) in Gladiolus in addition to its well-studied function in Arabidopsis seeds (reproductive organ).

  10. Space-time modelling of lightning-caused ignitions in the Blue Mountains, Oregon

    Science.gov (United States)

    Diaz-Avalos, Carlos; Peterson, D.L.; Alvarado, Ernesto; Ferguson, Sue A.; Besag, Julian E.

    2001-01-01

    Generalized linear mixed models (GLMM) were used to study the effect of vegetation cover, elevation, slope, and precipitation on the probability of ignition in the Blue Mountains, Oregon, and to estimate the probability of ignition occurrence at different locations in space and in time. Data on starting location of lightning-caused ignitions in the Blue Mountains between April 1986 and September 1993 constituted the base for the analysis. The study area was divided into a pixela??time array. For each pixela??time location we associated a value of 1 if at least one ignition occurred and 0 otherwise. Covariate information for each pixel was obtained using a geographic information system. The GLMMs were fitted in a Bayesian framework. Higher ignition probabilities were associated with the following cover types: subalpine herbaceous, alpine tundra, lodgepole pine (Pinus contorta Dougl. ex Loud.), whitebark pine (Pinus albicaulis Engelm.), Engelmann spruce (Picea engelmannii Parry ex Engelm.), subalpine fir (Abies lasiocarpa (Hook.) Nutt.), and grand fir (Abies grandis (Dougl.) Lindl.). Within each vegetation type, higher ignition probabilities occurred at lower elevations. Additionally, ignition probabilities are lower in the northern and southern extremes of the Blue Mountains. The GLMM procedure used here is suitable for analysing ignition occurrence in other forested regions where probabilities of ignition are highly variable because of a spatially complex biophysical environment.

  11. [Dynamic changes of topsoil organic carbon in subalpine spruce plantation at different succession stages in western Sichuan Province].

    Science.gov (United States)

    Jiang, Fa-Yan; Sun, Hui; Lin, Bo; Liu, Qing

    2009-11-01

    Soil samples at 0-30 cm depth were collected from the primary spruce (Picea asperata) forest and its plantations at different succession stages (22-, 47-, and 65-year-old) in subalpine zone of western Sichuan Province to study the dynamic changes of soil organic carbon stock and labile organic carbon content. The soil total organic carbon (TOC) stocks in 0-10, 10-20, and 20-30 cm soil layers decreased from 95.87, 79.08, and 71.55 t x hm(-2) in 22-year-old plantation to 56.12, 34.75, and 31.06 t x hm(-2) in 65-year-old plantation, respectively, and the TOC stocks in these soil layers in 47 and 65-year-old plantations were less than those (88.08, 71.16 and 64.81 t x hm(-2), respectively) in primary forest. The easily oxidizable organic carbon (EOC) contents in 0-10, 10-20, and 20-30 cm soil layers decreased from 35.89, 26.91, and 26.00 g x kg(-1) in primary forest to 20.25, 14.50, and 12.36 g x kg L(-1) in 65-year-old plantation, the microbial biomass carbon (MBC) contents decreased from 524.44, 273.26, and 257.97 mg x kg(-1) in primary forest to 312.41, 186.95, and 152.18 mg x kg(-1) in 65-year-old plantation, and the particulate organic carbon (POC) contents decreased from 40.23, 27.10, and 19.55 g x kg(-1) in primary forest to 12.33, 7.31, and 5.32 g x kg(-1) in 65-year-old plantation, respectively. The results suggested that within the long succession period of primary P. asperata forest to its plantations in the subalpine zone of western Sichuan Province, soil TOC and labile organic carbon were in the state of net consumption.

  12. Subalpine Conifer Seedling Demographics: Species Responses to Climate Manipulations Across an Elevational Gradient at Niwot Ridge, Colorado

    Science.gov (United States)

    Castanha, C.; Germino, M. J.; Torn, M. S.; Ferrenberg, S.; Harte, J.; Kueppers, L. M.

    2010-12-01

    The effect of climate change on future ranges of treeline species is poorly understood. For example, it is not known whether trees will recruit into the alpine, above the current treeline, and whether population-level differences in trees will mediate range shifts. At Niwot Ridge, Colorado, we used common gardens and climate manipulations to test predictions that warming will lead to greater recruitment at and beyond the cold edge of these species ranges, and will reduce recruitment at the warm edge. Seed from local populations of limber pine and Englemann spruce was harvested and reciprocally planted in 3 experimental sites spanning an elevation gradient from lower subalpine forest (10,000’), to the upper subalpine treeline ecotone (11,000’), to the alpine tundra (11,300’). In Fall 2009 seeds were sown into 20 plots at each site. Overhead infrared heaters targeted increases in growing season surface soil temperature of 4-5°C. The heating treatment, which began in October 2009, was crossed with manual watering, which was initiated following snowmelt in 2010. Over the 2010 growing season, we surveyed seedling germination and mortality weekly. Germination began in early May at the forest site, in early June at the krummholz site, and in early July at the alpine site. Depending on the site and plot, heating accelerated germination by 1 to 4 weeks. Seed source elevation, species, and site all affected germination, with effects for the two species also depending on site. At all sites, lower elevation, warm-edge populations had higher germination rates than high-elevation, cool-edge populations, indicating a potential bottleneck for germination of the high elevation seed sources in the adjacent alpine tundra. At all sites, survival was generally higher for pine than for spruce. Watering tended to enhance pine germinant survival while heating tended to depress spruce germinant survival. Our results indicate that the alpine tundra, generally considered an

  13. Early warning system for Douglas-fir tussock moth outbreaks in the Western United States.

    Science.gov (United States)

    Gary E. Daterman; John M. Wenz; Katharine A. Sheehan

    2004-01-01

    The Early Warning System is a pheromone-based trapping system used to detect outbreaks of Douglas-fir tussock moth (DFTM, Orgyia pseudotsugata) in the western United States. Millions of acres are susceptible to DFTM defoliation, but Early Warning System monitoring focuses attention only on the relatively limited areas where outbreaks may be...

  14. Using silviculture to influence carbon sequestration in southern Appalachian spruce-fir forests

    Science.gov (United States)

    Patrick T. Moore; R. Justin DeRose; James N. Long; Helga. van Miegroet

    2012-01-01

    Enhancement of forest growth through silvicultural modification of stand density is one strategy for increasing carbon (C) sequestration. Using the Fire and Fuels Extension of the Forest Vegetation Simulator, the effects of even-aged, uneven-aged and no-action management scenarios on C sequestration in a southern Appalachian red spruce-Fraser fir forest were modeled....

  15. Is long primary growth associated with stem sinuosity in Douglas-fir?

    Science.gov (United States)

    Barbara L. Gartner; G.R. Johnson

    2006-01-01

    Stem sinuosity is a highly visible stem-form trait in the leaders of fast-growing Douglas-fir (Pseudotsuga menziesii var. menziesii (Mirb.) Franco) trees, yet its cause is unknown. We tested the hypotheses that sinuous stems have longer expanses of primary growth than nonsinuous stems (putting the leader at higher risk for...

  16. Lacinipolia Patalis grote (Lepidoptera: Noctuidae) infesting Douglas-fir cones: A new host record

    Science.gov (United States)

    Nancy G. Rappaport

    1988-01-01

    Larvai of Lacinipolia patalis (Grote) (Lepidoptera: Noctuidae) were discovered in Douglas-fir (Pseudotsuga menziessi [Mirb.} Franco) cones collected from the Louisiana-Pacific Corporation's Little River Seed Orchard near Trinidad Head in Humboldt County, CA (elevation 91 m) during the fall of 1985. Previous surveys have not...

  17. EuroFIR quality approach for managing food composition data; where are we in 2014?

    Science.gov (United States)

    Westenbrink, Susanne; Roe, Mark; Oseredczuk, Marine; Castanheira, Isabel; Finglas, Paul

    2016-02-15

    A EuroFIR quality management framework was developed to assure data quality of food composition data, incorporating several recommendations developed or improved during the EuroFIR projects. A flow chart of the compilation process with standard operating procedures to assure critical steps was the starting point. Recommendations for food description, component identification, value documentation, recipe calculation, quality evaluation of values, guidelines to assess analytical methods, document and data repositories and training opportunities were harmonized as elements of the quality framework. European food composition database organizations reached consensus on the EuroFIR quality framework and started implementation. Peer reviews of the European compiler organizations were organized to evaluate the quality framework, focusing on what was achieved and on improvements needed. The reviews demonstrated that European food database compilers have made good use of standards and guidelines produced by EuroFIR, as well as a common understanding that a quality framework is essential to assure food composition data quality. Copyright © 2015 Elsevier Ltd. All rights reserved.

  18. Estimating biomass of shrubs and forbs in central Washington Douglas-fir stands.

    Science.gov (United States)

    Craig M. Olson; Robert E. Martin

    1981-01-01

    Understory plants in closed 70-year-old even-aged Douglas-fir stands in north central Washington were destructively sampled to determine the relationship of ground cover and height to dry weight. Weight of plant material can be estimated from the product of plant height and percentage of ground cover on 50- x 100-centimeter (cm) quadrats. Correlation coefficients for...

  19. Assessing the specific energy consumption and physical properties of comminuted Douglas-fir chips for bioconversion

    Science.gov (United States)

    Yalan Liu; Jinwu Wang; Michael P. Wolcott

    2016-01-01

    Size reduction homogenizes the bulk biomass and facilitates downstream feedstock handling, transportation, and storage. Effects of feeding rate, mill-type (hammer and knife mill), screen size, and moisture content on comminution energy consumption of commercial Douglas-fir (Pseudotsuga menziesii) pulp chips were quantified. The resulting particles...

  20. Stratification period and germination of Douglas-fir seed from Oregon seed orchards: two case studies.

    Science.gov (United States)

    Frank C. Sorenson

    1991-01-01

    Effect of stratification period (S) and incubation temperature (T) on germination be- havior were tested by using two groups of Douglas-fir orchard seedlots that had given low germination percentages in standard tests. One group of seedlots that had experienced different cone-drying regimes, but otherwise were treated comparably, were germinated at T = 15 and 25 °C...

  1. Effect of thinning on form of young-growth Douglas-fir trees.

    Science.gov (United States)

    Vern P. Yerkes

    1960-01-01

    With the advent of increased thinning activity in managed stands of young-growth Douglas-fir (Pseudotsuga menziesii), knowledge of growth and form development of released trees becomes necessary for calculations of total volume and growth. Any appreciable change in the rate of radial increment at various points along the stem of a released tree...

  2. The New Zealand douglas-fir breeding program: proposed adjustments for a changing climate

    Science.gov (United States)

    Heidi Dungey; Charlie Low; Mark Miller; Kane Fleet; Alvin D. Yanchuk

    2012-01-01

    Genetic improvement of Douglas-fir (Pseudotsuga menziesii (Mirb.) Franco) in New Zealand was initiated in 1955 with large provenance trials established in the late 1950s. These trials showed that material of Oregon and Californian origin was growing faster than other provenances. Additional collections were made to further evaluate provenance...

  3. The economic significance of mortality in old-growth Douglas-fir management.

    Science.gov (United States)

    R.O. McMahon

    1961-01-01

    Current mortality in the Douglas-fir subregion, exclusive of catastrophic mortality, approximates a billion feet a year. The Forest Service report "Timber Resources for America's Future" recommended "...utilizing a substantial portion of the unsalvaged mortality loss..." as one means of permanently increasing the Nation's timber supply and...

  4. Douglas-fir growth in mountain ecosystems: water limits tree growth from stand to region

    Science.gov (United States)

    Jeremy S. Littell; David L. Peterson; Michael Tjoelker

    2008-01-01

    The purpose of this work is to understand the nature of growth-climate relationships for Douglas-fir (Pseudotsuga menziesii) across the climatic dimensions of its niche. We used a combination of biophysically informed sampling (to identify sample sites) and dendroclimatology (to identify growth-climate relationships) along a climate gradient in...

  5. CO2 uptake by a stand of Douglas fir: flux measurements compared with model calculations

    NARCIS (Netherlands)

    Vermetten, A.W.M.; Ganzeveld, L.; Jeuken, A.; Hofschreuder, P.; Mohren, G.M.J.

    1994-01-01

    Fluxes of CO2 were calculated by the gradient method from concentration differences, measured in the surface roughness layer above a Douglas fir stand in the Netherlands during a full year (1989). The annual course of the CO2 flux density clearly showed the influence of temperature and incoming

  6. Revised Site Index Curves for Balsam Fir and White Spruce in the Lake States

    Science.gov (United States)

    Willard H. Carmean; Jerold T. Hahn

    1981-01-01

    The original site index curves for balsam fir and white spruce are revised from a breast height age to a total age basis. Site index values from these revised curves are thus comparable to index values for other species that are based upon total tree age. This note also includes formulations for estimating site index by using computers or programmable, hand-...

  7. Growth phenology of coast Douglas-fir seed sources planted in diverse environments

    Science.gov (United States)

    Peter J. Gould; Constance A. Harrington; J. Bradley. St. Clair

    2012-01-01

    The timing of periodic life cycle events in plants (phenology) is an important factor determining how species and populations will react to climate change. We evaluated annual patterns of basal-area and height growth of coast Douglas-fir (Pseudotusuga menziesii var. menziesii (Mirb.) Franco) seedlings from four seed sources...

  8. Fungal endophytes in woody roots of Douglas-fir (Pseudotsuga menziesii) and ponderosa pine (Pinus ponderosa)

    Science.gov (United States)

    J. A. Hoff; Ned B. Klopfenstein; Geral I. McDonald; Jonalea R. Tonn; Mee-Sook Kim; Paul J. Zambino; Paul F. Hessburg; J. D. Rodgers; T. L. Peever; L. M. Carris

    2004-01-01

    The fungal community inhabiting large woody roots of healthy conifers has not been well documented. To provide more information about such communities, a survey was conducted using increment cores from the woody roots of symptomless Douglas-fir (Pseudotsuga menziesii) and ponderosa pine (Pinus ponderosa) growing in dry forests...

  9. Screening Douglas-fir for rapid early growth in common-garden tests in Spain

    Science.gov (United States)

    Gabriel Toval Hernandez; Guillermo Vega Alonso; Gonzalo Puerto Arribas; James L. Jenkinson

    1993-01-01

    Douglas-firs from 91 seed sources in North America were evaluated after 5 and 6 years in 15 common-garden tests in the mountainous regions of northwest and north central Spain. Analyses of tallest trees showed that most of the sources of highest potential for reforestation in Spain are found in regions where the Pacific Ocean air mass dominates climate. Fast growers...

  10. Structural lumber from dense stands of small-diameter Douglas-fir trees.

    Science.gov (United States)

    David W. Green; Eini C. Lowell; Roland. Hernandez

    2005-01-01

    Small-diameter trees growing in overstocked dense stands are often targeted for thinning to reduce fire hazard and improve forest health and ecosystem diversity. In the Pacific Northwest and Intermountain regions, Douglas-fir can be a predominant species in such stands. In this study, mechanical properties and grade yield of structural products were estimated for 2 by...

  11. The Douglas-Fir Genome Sequence Reveals Specialization of the Photosynthetic Apparatus in Pinaceae

    Directory of Open Access Journals (Sweden)

    David B. Neale

    2017-09-01

    Full Text Available A reference genome sequence for Pseudotsuga menziesii var. menziesii (Mirb. Franco (Coastal Douglas-fir is reported, thus providing a reference sequence for a third genus of the family Pinaceae. The contiguity and quality of the genome assembly far exceeds that of other conifer reference genome sequences (contig N50 = 44,136 bp and scaffold N50 = 340,704 bp. Incremental improvements in sequencing and assembly technologies are in part responsible for the higher quality reference genome, but it may also be due to a slightly lower exact repeat content in Douglas-fir vs. pine and spruce. Comparative genome annotation with angiosperm species reveals gene-family expansion and contraction in Douglas-fir and other conifers which may account for some of the major morphological and physiological differences between the two major plant groups. Notable differences in the size of the NDH-complex gene family and genes underlying the functional basis of shade tolerance/intolerance were observed. This reference genome sequence not only provides an important resource for Douglas-fir breeders and geneticists but also sheds additional light on the evolutionary processes that have led to the divergence of modern angiosperms from the more ancient gymnosperms.

  12. Effect of natural inbreeding on variance structure in tests of wind pollination Douglas-fir progenies.

    Science.gov (United States)

    Frank C. Sorensen; T.L. White

    1988-01-01

    Studies of the mating habits of Douglas-fir (Pseudotsuga menziesii (Mirb.) Franco) have shown that wind-pollination families contain a small proportion of very slow-growing natural inbreds.The effect of these very small trees on means, variances, and variance ratios was evaluated for height and diameter in a 16-year-old plantation by...

  13. Genetic variation in response to shade in coastal Douglas-fir.

    Science.gov (United States)

    J. Bradley St. Clair; Richard A. Sniezko

    1999-01-01

    Tree improvement programs have generally relied on testing families in open light environments. With increased interest in multiaged silvicultural systems, some people have questioned whether families selected in the open are appropriate for planting in the shade. We grew Douglas-fir (Pseudotsuga menziesii (Mirb.) Franco var. menziesii...

  14. Growth and nutrition of Douglas fir, Scots pine and pedunculate oak in relation to soil acidification

    NARCIS (Netherlands)

    Visser, de P.H.B.

    1994-01-01

    In a Douglas fir ( Pseudotsuga menziesii (Mirb.) Franco) and in a Scots pine ( Pinus sylvestris L.) stand on sandy soil in the Netherlands, inputs of water, nutrients and acid loads were changed for four years. Effects of soil changes on growth and

  15. FIBER handbook: a growth model for spruce-fir and northern hardwood types

    Science.gov (United States)

    Dale S. Solomon; Richard A. Hosmer; Homer T., Jr. Hayslett; Homer T. Hayslett

    1987-01-01

    A matrix model, FIBER, has been developed to provide the forest manager with a means of simulating the management and growth of forest stands in the Northeast. Instructional material is presented for the management of even-aged and multi-aged spruce-fir, mixedwood, and northern hardwood stands. FIBER allows the user to simulate a range of silvicultural treatments for a...

  16. Herbs and brush on California red fir regeneration sites: a species and frequency sampling

    Science.gov (United States)

    Donald T. Gordon; Eugene E. Bowen

    1978-01-01

    In a sampling of 32 logged areas in red fir forests of northern California, 58 plant species were found. Species corresponded with less than one-fifth of the 93 species reported in an earlier study of the virgin forest. Sampling of uncut areas adjacent to cuttings does not seem useful for predicting the earlier successional vegetation that will appear when the areas...

  17. Estimating effect of Megastigmus spermotrophus (Hymenoptera: Torymidae) on Douglas-fir seed production: the new paradigm

    Science.gov (United States)

    Nancy Rappaport; Alain Roques; Sylvia Mori

    1993-01-01

    In a pollen exclusion experiment performed on the cones of five Douglas-fir (Pseudotsuga menziesii [Mirbel] Franco) trees, the number of seeds infested by a seed chalcid, Megastigmus spermotrophus Wachtl, did not differ significantly between pollinated and unpollinated cones from the same tree. This finding led to a revision of the...

  18. Logging damage in thinned, young-growth true fir stands in California and recommendations for prevention.

    Science.gov (United States)

    Paul E. Aho; Gary Fiddler; Mike. Srago

    1983-01-01

    Logging-damage surveys and tree-dissection studies were made in commercially thinned, naturally established young-growth true fir stands in the Lassen National Forest in northern California. Significant damage occurred to residual trees in stands logged by conventional methods. Logging damage was substantially lower in stands thinned using techniques designed to reduce...

  19. Predicting regeneration in the grand fir-cedar-hemlock ecosystem of the northern Rocky Mountains

    Science.gov (United States)

    Dennis E. Ferguson; Albert R. Stage; Raymond J. Boyd

    1986-01-01

    Conifer establishment following regeneration treatments can be predicted in the grand fir-cedar-hemlock ecosystem of the northern Rocky Mountains. Alternative treatments can be evaluated by a model that represents regeneration establishment and early development. This model is designed to be used with the Intermountain Forest and Range Experiment Station's...

  20. Impact of douglas-fir tussock moth... color aerial phtography evaluates mortality

    Science.gov (United States)

    Steven L. Wert; Boyd E. Wickman

    1970-01-01

    Thorough evaluation of insect impact on forest stands is difficult and expensive on the ground. In a study of tree damage following Douglas-fir tussock moth defoliation in Modoc County, California, large-scale (1:1,584)70-mm. color aerial photography was an effective sampling tool and took lesstime and expense than ground methods. Comparison of the photo...

  1. Partial DNA sequencing of Douglas-fir cDNAs used in RFLP mapping

    Science.gov (United States)

    K.D. Jermstad; D.L. Bassoni; C.S. Kinlaw; D.B. Neale

    1998-01-01

    DNA sequences from 87 Douglas-fir (Pseudotsuga menziesii [Mirb.] Franco) cDNA RFLP probes were determined. Sequences were submitted to the GenBank dbEST database and searched for similarity against nucleotide and protein databases using the BLASTn and BLASTx programs. Twenty-one sequences (24%) were assigned putative functions; 18 of which...

  2. Simulation of carbon and water budgets of a Douglas-fir forest

    NARCIS (Netherlands)

    Wijk, van M.T.; Dekker, S.C.; Bouten, W.; Kohsiek, W.; Mohren, G.M.J.

    2001-01-01

    The forest growth/hydrology model FORGRO–SWIF, consisting of a forest growth and a soil water model, was applied to quantify the inter-annual variability of the carbon and water budgets of a Douglas-fir forest (Pseudotsuga menziessii (Mirb.) Franco) in The Netherlands. With these budgets, the water

  3. Dynamic phenotypic plasticity in photosynthesis and biomass patterns in Douglas-fir seedlings

    Science.gov (United States)

    A. C. Koehn; G. I. McDonald; D. L. Turner; D. L. Adams

    2010-01-01

    As climate changes, understanding the mechanisms long-lived conifers use to adapt becomes more important. Light gradients within a forest stand vary constantly with the changes in climate, and the minimum light required for survival plays a major role in plant community dynamics. This study focuses on the dynamic plasticity of Douglas-fir (Pseudotsuga menziesii var....

  4. Genetic maladaptation of coastal Douglas-fir seedlings to future climates

    Science.gov (United States)

    Brad St. Clair;  Glenn T. Howe

    2007-01-01

    Climates are expected to warm considerably over the next century, resulting in expectations that plant populations will not be adapted to future climates.We estimated the risk of maladaptation of current populations of coastal Douglas-fir (Pseudotsuga menziesii var. menziesii) to future climates as the proportion of nonoverlap between two normal...

  5. Predicting the effects of tropospheric ozone on regional productivity of ponderosa pine and white fir.

    Science.gov (United States)

    D.A. Weinstein; J.A. Laurence; W.A. Retzlaff; J.S. Kern; E.H. Lee; W.E. Hogsett; J. Weber

    2005-01-01

    We simulated forest dynamics of the regional ponderosa pine-white fir conifer forest of the San Bernadino and Sierra Nevada mountains of California to determine the effects of high ozone concentrations over the next century and to compare the responses to our similar study for loblolly pine forests of the southeast. As in the earlier study, we linked two models, TREGRO...

  6. A tool for automatic generation of RTL-level VHDL description of RNS FIR filters

    DEFF Research Database (Denmark)

    Re, Andrea Del; Nannarelli, Alberto; Re, Marco

    2004-01-01

    Although digital filters based on the Residue Number System (RNS) show high performance and low power dissipation, RNS filters are not widely used in DSP systems, because of the complexity of the algorithms involved. We present a tool to design RNS FIR filters which hides the RNS algorithms...

  7. Estimating the weight of Douglas-fir tree boles and logs with an iterative computer model.

    Science.gov (United States)

    Dale R. Waddell; Dale L Weyermann; Michael B. Lambert

    1987-01-01

    A computer model that estimates the green weights of standing trees was developed and validated for old-growth Douglas-fir. The model calculates the green weight for the entire bole, for the bole to any merchantable top, and for any log length within the bole. The model was validated by estimating the bias and accuracy of an independent subsample selected from the...

  8. Analysis and comparison of nonlinear tree height prediction strategies for Douglas-fir forest.

    Science.gov (United States)

    H. Temesgen; V.J. Monleon; D.W. Hann

    2008-01-01

    Using an extensive Douglas-fir data set from southwest Oregon, we examined the (I) performance and suitability of selected prediction strategies, (2) contribution of relative position and stand-density measures in improving tree height (h) prediction values, and (3) effect of different subsampling designs to fill in missing h values in a new stand using a regional...

  9. Pest management in Douglas-fir seed orchards: a microcomputer decision method

    Science.gov (United States)

    James B. Hoy; Michael I. Haverty

    1988-01-01

    The computer program described provides a Douglas-fir seed orchard manager (user) with a quantitative method for making insect pest management decisions on a desk-top computer. The decision system uses site-specific information such as estimates of seed crop size, insect attack rates, insecticide efficacy and application costs, weather, and crop value. At sites where...

  10. Establishment and growth of native hardwood and conifer seedlings underplanted in thinned Douglas-fir stands.

    Science.gov (United States)

    Kathleen G. Maas-Hebner; William H. Emmingham; David L. Larson; Samuel S. Chan

    2005-01-01

    Five conifers and two hardwoods native to the Pacific Northwest were planted under four overstory densities of 30-year-old plantations of Douglas-fir (Pseudotsuga menziesii (Mirb.) Franco) in the Oregon Coast Range, USA. Stand treatments were unthinned (547 trees ha-1), narrow thin (252 trees ha-1),...

  11. Carbon Sequestration in Soils Affected by Douglas Fir Reforestation in Apennines (Northern Italy

    Directory of Open Access Journals (Sweden)

    Giampaolo Di Biase

    2015-12-01

    Full Text Available Douglas fir reforestation plays an important role in Italian forest because no indigenous conifer has similar characteristics of productivity and timber quality. Few studies on physicochemical properties of soils under Douglas fire are noticeable. The aim of this work is to evaluate the organic C stock into soils under Douglas fir plantation in different selected areas. The areas of study are located in the North Apennine (Italy; Corno alle Scale (COR, Vallombrosa (VAL, Mulino Mengoni (MEN, respectively are chosen for the presence of Douglas fir reforestation of 60 years old. Two soil profiles for each area have been open and described. The pH value decreased along the profile depth. The organic C amount in organic layers was higher in Val and Men pedons than that determined in COR one. Higher amount of organic C were detected in organo-mineral horizons of Co pedons, highlighting a rapid turnover of soil organic matter. The C stock calculated in the first 30 cm of soil showed that the higher C amount is stored in highest altitudes profiles (COR6 and VAL6 than the other. The soil are classified as Lithic Dystrudepts in the highest altitudes (COR 6, 7 and VAL 6, 7, respectively while as Humic Dystrudepts in MEN (4 and 5 pedons. We conclude that no dangerous effects on soil quality of Douglas fir were investigated and they seem to be similar to those of native tree species, even if other different aspects should be investigated.

  12. Effects of water suspension and wet-dry cycling on fertility of Douglas-fir pollen.

    Science.gov (United States)

    Donald L. Copes; Nan C. Vance

    2000-01-01

    Studies were made to determine how long Douglas-fir pollen remains viable after suspension in cool water form 0 to 34 days. Linear regression analysis of in vivo and in vitro tests indicated that filled seed efficiency and pollen viability, respectively, decreased about 3 percent per day. The relation may have been nonlinear the first 6 days, as little decrease...

  13. Characterization of wood strands from young, small-diameter Douglas-fir and western hemlock trees

    Science.gov (United States)

    Vikram Yadama; Eini C. Lowell; Christopher E. Langum

    2012-01-01

    Tensile properties of strands processed from small-diameter Douglas-fir and western hemlock trees grown on the Washington coast were analyzed and effects of location within the tree on properties was examined. Reduction factors for strand properties relative to small, clear solid wood specimen properties were determined by correlating strand properties to previously...

  14. DFSIM with economics: A financial analysis option for the DFSIM Douglas-fir simulator.

    Science.gov (United States)

    Roger O. Fight; Judith M. Chittester; Gary W. Clendenen

    1984-01-01

    A modified version of the DFSIM Douglas-fir (Pseudotsuga menziesii (Mirb.) Franco var. menziesii) growth and yield simulator, DFSIM WITH ECONOMICS, now has an economics option that allows the user to estimate present net worth at the same time a silvicultural regime is simulated. If desired, the economics option will apply a...

  15. Three different criteria for the design of two-dimensional zero phase FIR digital filters

    DEFF Research Database (Denmark)

    Gislason, E.; Johansen, M.; Conradsen, Knut

    1993-01-01

    An error criterion for the design of FIR filters is proposed. Filters with relatively many free filter coefficients are designed using the Chebyshev, the weighted-least-squares (WLS), and a new partitioned minimax error criterion, and the performance of the filters is compared. A general and fast...

  16. Silvicultural research and the evolution of forest practices in the Douglas-fir region.

    Science.gov (United States)

    Robert O. Curtis; Dean S. DeBell; Richard E. Miller; Michael Newton; J. Bradley St. Clair; William I. Stein

    2007-01-01

    Silvicultural practices in the Douglas-fir region evolved through a combination of formal research, observation, and practical experience of forest managers and silviculturists, and changing economic and social factors. This process began more than a century ago and still continues. It has had a great influence on the economic well-being of the region and on the...

  17. Ground-based forest harvesting effects on soil physical properties and Douglas-fir growth.

    Science.gov (United States)

    Adrian Ares; Thomas A. Terry; Richard E. Miller; Harry W. Anderson; Barry L. Flaming

    2005-01-01

    Soil properties and forest productivity can be affected by heavy equipment used for harvest and site preparation but these impacts vary greatly with site conditions and operational practices. We assessed the effects of ground-based logging on soil physical properties and subsequent Douglas-fir [Pseudotsuga menziesii (Mirb) Franco] growth on a highly...

  18. Preparation and morphology of porous SiO2 ceramics derived from fir flour templates

    Directory of Open Access Journals (Sweden)

    ZHONG LI

    2010-03-01

    Full Text Available The preparation of SiO2 ceramics with controllable porous structure from fir flour templates via sol–gel processing was investigated. The specific size the fir flour, which was treated with 20 % NaOH solution, was infiltrated with a low viscous silica sol and subsequently calcined in air, which resulted in the formation of highly porous SiO2 ceramics. X-Ray diffraction (XRD, Fourier transform infrared spectroscopy (FTIR and field emission scanning electron microscopy (FESEM were employed to investigate the microstructure and phase formation during processing as well as of the SiO2 ceramics. N2 adsorption measurements were used to analyze the pore size distributions (PSD of the final ceramics. The results indicated that the surface topography was changed and the proportion of the amorphous material was increased in NaOH-treated fir flour. The final oxide products retained ordered structures of the pores and showed unique pore sizes and distributions with hierarchy on the nanoscale derived from the fir flour.

  19. Overstory response to alternative thinning treatments in young Douglas-fir forests of Western Oregon.

    Science.gov (United States)

    Liane R. Davis; Klaus J. Puettmann; Gabriel F. Tucker

    2007-01-01

    An increase in land dominated by young second-growth Douglas-fir forests in the Pacific Northwest has coincided with heightened concerns over loss of old-growth habitat. In search of options for managing young forests to provide late-successional forest structures, the Young Stand Thinning and Diversity Study was designed to test the effectiveness of modified thinning...

  20. Can a fake fir tell the truth about Swiss needle cast? (paper) ...

    Science.gov (United States)

    A key question in dendrochronology to reconstruct forest disturbance history is how to distinguish between the effects of Swiss needle cast (SNC) and other forest disturbance agents (e.g., Arceuthobium spp., Armillaria, Phaseolus schweinitzii, Dendroctonus ponderosae, Dendroctonus pseudotsugae, Choristoneura occidentalis Freeman, Orgyia pseudotsugata McDunnough) on radial stem growth of Douglas-fir (Pseudotsuga menziesii (Mirb.) Franco). SNC impacts physiological processes of carbon and water relations by stomatal occlusion and early needle abscission resulting in a reduction of tree growth with a distinct periodicity, whereas phytophagous pests reduce tree growth by defoliation with epidemics following less regular pseudo-periodicities. Outbreaks of the various forest disturbance agents differ in their magnitude, frequency, and duration. In particular, SNC impacts on Douglas-fir growth display a primary periodicity of 6-30 years and a secondary periodicity of 3-5 years which is unique to the causal fungus Phaeocryptopus gaeumannii (Rhode) Petrak. We use frequency domain analysis of tree-ring chronologies of Douglas-fir to identify the SNC disease cycle and separate the confounding effects of climate and SNC. We demonstrate the dendroecological reconstruction of SNC impacts on ancient Douglas-fir trees dated ~65K radioactive years B.P. from Eddyville, OR that were unearthed by the Oregon Department of Transportation. By the end of the 21st century, climate

  1. Realized gains from block-plot coastal Douglas-fir trials in the northern Oregon Cascades

    Science.gov (United States)

    Terrence Z. Ye; Keith J.S. Jayawickrama; J. Bradley. St. Clair

    2010-01-01

    Realized gains for coastal Douglas-fir (Pseudotsuga menziesii var. menziesii) were evaluated using data collected from 15-year-old trees from five field trials planted in large block plots in the northern Oregon Cascades. Three populations with different genetic levels (elite--high predicted gain; intermediate--moderate predicted gain; and an...

  2. Douglas-fir seedlings exhibit metabolic responses to increased temperature and atmospheric drought.

    Directory of Open Access Journals (Sweden)

    Kirstin Jansen

    Full Text Available In the future, periods of strongly increased temperature in concert with drought (heat waves will have potentially detrimental effects on trees and forests in Central Europe. Norway spruce might be at risk in the future climate of Central Europe. However, Douglas-fir is often discussed as an alternative for the drought and heat sensitive Norway spruce, because some provenances are considered to be well adapted to drier and warmer conditions. In this study, we identified the physiological and growth responses of seedlings from two different Douglas-fir provenances to increased temperature and atmospheric drought during a period of 92 days. We analysed (i plant biomass, (ii carbon stable isotope composition as an indicator for time integrated intrinsic water use efficiency, (iii apparent respiratory carbon isotope fractionation as well as (iv the profile of polar low molecular metabolites. Plant biomass was only slightly affected by increased temperatures and atmospheric drought but the more negative apparent respiratory fractionation indicated a temperature-dependent decrease in the commitment of substrate to the tricarboxylic acid cycle. The metabolite profile revealed that the simulated heat wave induced a switch in stress protecting compounds from proline to polyols. We conclude that metabolic acclimation successfully contributes to maintain functioning and physiological activity in seedlings of both Douglas-fir provenances under conditions that are expected during heat waves (i.e. elevated temperatures and atmospheric drought. Douglas-fir might be a potentially important tree species for forestry in Central Europe under changing climatic conditions.

  3. Winter injury among white fir seedlings...unusual pattern in seed source study

    Science.gov (United States)

    M. Thompson Conkle; W. J. Libby; J. L. Hamrick

    1967-01-01

    White fir seeds collected from 43 sources were sown at the Institute of Forest Genetics, Placerville, Calif. in 1963. Observations made 3 years later showed that seedlings from northern sources sustained more winter injury than did southern origin seedlings. Seedlings from low elevations were less severely damaged than seedlings from higher elevations in the same...

  4. Physiological responses of planting frozen and thawed Douglas-fir seedlings

    Science.gov (United States)

    M. Anisul Islam; Kent G. Apostol; Douglass F. Jacobs; R. Kasten Dumroese

    2008-01-01

    We studied the short-term (7-day) physiological responses of planting thawed and frozen root plugs of Douglas-fir (Pseudotsuga menziesii) seedlings in 2 separate experiments under cool-moist and warm-dry growing conditions, respectively. Our results showed that shoot water potential, root hydraulic conductance, net photosynthesis (A), and...

  5. Training aspects in the use and production of food composition databases. The EuroFIR experience.

    NARCIS (Netherlands)

    Hollman, P.C.H.; Witthöft, C.; Busstra, M.C.; Elburg, L.; Hulshof, P.J.M.

    2009-01-01

    An increasing number of national food databases have been published on the internet. However, these internet databases can only be searched individually, and the data have been compiled at a national level, resulting in incompatibilities. To resolve these problems, the Network of Excellence EuroFIR

  6. Prediction of wood Quality in Small-Diameter Douglas-Fir using site and Stand Characteristics

    Science.gov (United States)

    C.D. Morrow; T.M. Gorman; J.W. Evans; D.E. Kretschmann; C.A. Hatfield

    2013-01-01

    Standing stress wave measurements were taken on 274 small-diameter Douglas-fir trees in western Montana. Stand, site, and soil measurements collected in the field and remotely through geographical information system (GIS) data layers were used to model dynamic modulus of elasticity (DMOE) in those trees. The best fit linear model developed resulted in an adjusted

  7. Impact of the foliar pathogen Swiss needle cast on wood quality of Douglas-fir.

    Science.gov (United States)

    G.R. Johnson; Amy T. Grotta; Barbara L. Gartner; Geoff. Downes

    2005-01-01

    Many stands of Douglas-fir (Pseudotsuga menziesii (Mirb.) Franco) near coastal areas of Oregon and Washington are heavily infected with the foliar pathogen causing Swiss needle cast (SNC) disease, and yet there is very little research on the resulting wood quality. Modulus of elasticity(MOE), modulus of rupture (MOR), microfibril angle (MFA), wood...

  8. Early genetic evaluation of open-pollinated Douglas-fir families

    Science.gov (United States)

    Kurt H. Riitters; David A. Perry

    1987-01-01

    In a test of early genetic evaluation of the growth potential of 14 families of open-pollinated Douglas-fir (Pseudotsuga menziesii) [Mirb.] Franco), measures of growth and phenology of seedligns grown in a coldframe were correlated with height of saplings in evaluation plantations at 9, 12, and 15 years. fifteen-year height was most strongly...

  9. Far infrared ray (FIR) therapy: An effective and oncological safe treatment modality for breast cancer related lymphedema.

    Science.gov (United States)

    Li, Ke; Xia, Liang; Liu, Ning Fei; Nicoli, Fabio; Constantinides, Joannis; D'Ambrosia, Christopher; Lazzeri, Davide; Tremp, Mathias; Zhang, Ju Fang; Zhang, Yi Xin

    2017-07-01

    The incidence of breast cancer related lymphedema is approximately 5%. Far infrared ray (FIR) treatment can potentially reduce fluid volume and extremity circumference as well as the frequency of dermato-lymphangitis (DLA). However, there is no published data on the oncological safety of FIR and the potential for activation of any residual breast cancer cells. The aim of this study is to investigate the safety of far infrared ray (FIR) treatment of postmastectomy lymphedema, clinically and in vitro. Patients who underwent mastectomy more than 5years ago complicated by upper extremity lymphedema for more than 1year were included. The enrolled patients were divided into an FIR treatment group and a control group (conservative treatment using bandage compression). Outcome measures included tumor markers (CA153, CA125), ultrasonography of relevant structures and monitoring for adverse reactions 1year after treatment. For the in vitro part of the study, the effects of FIR on human breast adenocarcinoma cell lines (MCF7, MDA-MB231) compared to the effects of FIR on human dermal fibroblasts as a control were considered. The viability, proliferation, cell cycle and apoptotic statistics of the adenocarcinoma and human dermal fibroblast cell lines were analyzed and compared. Results demonstrated that after treatment with FIR, tumor marker (CA153, CA125) concentrations in both the FIR and control groups were not elevated. There was no statistically significant difference between FIR and control group marker expression (p>0.05). Furthermore, no patients were diagnosed with lymphadenectasis or newly enlarged lymph nodes in these two groups. Importantly, there were no adverse events in either group. The in vitro experiment indicated that FIR radiation does not affect viability, proliferation, cell cycle and apoptosis of fibroblasts, MCF-7 and MDA-MB-231 cells. FIR should be considered as feasible and safe for the treatment of breast cancer related lymphedema patients 5years

  10. Inter-annual climate variability and zooplankton: applying teleconnection indices to two deep subalpine lakes in Italy

    Directory of Open Access Journals (Sweden)

    Marina Manca

    2014-08-01

    Full Text Available Investigating relation between meteo-climatic indices and between-year variation in Daphnia population density and phenology is crucial for e.g. predicting impact of climate change on lake ecosystem structure and functioning. We tested whether and how two teleconnection indices calculated for the winter period, namely the East Atlantic pattern (EADJF and the Eastern Mediterranean Pattern (EMPDJF were correlated with Daphnia population growth in two Italian subalpine lakes, Garda and Maggiore. We investigated between-lake temporal coherence in: i water temperature within the water layer in which Daphnia is distributed; ii timing of Daphnia initial and spring maximum population density peak and iii the level of Daphnia spring maximum population density peak over an eleven-year period (1998-2008 of unchanged predation pressure by fish and invertebrates, and of common oligotrophy. Between-lake temporal coherence was high for an earlier start, an earlier, and lower, Daphnia population spring density peak after milder winters. Peak density level was coherently, positively correlated with soluble reactive phosphorus (SRP concentration. We hypothesized that Daphnia peak densities were related to atmospheric modes of variability in winter and to the degree of late winter mixing promoting replenishment of algal nutrients into upper water layers and phytoplankton growth, enhancing food availability and Daphnia fecundity, promoting Daphnia peak. 

  11. Equine Grazing in Managed Subalpine Wetlands: Effects on Arthropods and Plant Structure as a Function of Habitat

    Science.gov (United States)

    Holmquist, Jeffrey G.; Schmidt-Gengenbach, Jutta; Haultain, Sylvia A.

    2013-12-01

    Grazing management necessarily emphasizes the most spatially extensive vegetation assemblages, but landscapes are mosaics, often with more mesic vegetation types embedded within a matrix of drier vegetation. Our primary objective was to contrast effects of equine grazing on both subalpine vegetation structure and associated arthropods in a drier reed grass ( Calamagrostis muiriana) dominated habitat versus a wetter, more productive sedge habitat ( Carex utriculata). A second objective was to compare reed grass and sedge as habitats for fauna, irrespective of grazing. All work was done in Sequoia National Park (CA, USA), where detailed, long-term records of stock management were available. We sampled paired grazed and control wet meadows that contained both habitats. There were moderate negative effects of grazing on vegetation, and effects were greater in sedge than in reed grass. Conversely, negative grazing effects on arthropods, albeit limited, were greater in the drier reed grass, possibly due to microhabitat differences. The differing effects on plants and animals as a function of habitat emphasize the importance of considering both flora and fauna, as well as multiple habitat types, when making management decisions. Sedge supported twice the overall arthropod abundance of reed grass as well as greater diversity; hemipteran and dipteran taxa were particularly abundant in sedge. Given the greater grazing effects on sedge vegetation, greater habitat provision for terrestrial arthropods, and value as aquatic arthropod habitat, the wetter sedge assemblage is worthy of additional consideration by managers when planning for grazing and other aspects of land usage.

  12. The effects of winter recreation on alpine and subalpine fauna: a systematic review and meta-analysis.

    Directory of Open Access Journals (Sweden)

    Chloe F Sato

    Full Text Available The ski industry is often perceived as having a negative impact on sensitive alpine and subalpine communities. However, empirical evidence of such impacts is lacking. We reviewed the available literature from the last 35 years to quantify the reported effects of winter recreation on faunal communities. Overall, using one-sample binomial tests ('sign tests' we found that the effects of all types of winter recreation-related disturbances (i.e. ski runs, resort infrastructure and winter tourism were more likely to be negative or have no effect, than be positive for wildlife. More specifically, in Europe, where the majority of the available research was conducted, the impacts of winter recreation were most often negative for fauna. In terms of specific taxa, birds and to a lesser extent mammals and arthropods, responded negatively to disturbance. Results from our meta-analysis confirmed the results from our binomial tests. Richness, abundance and diversity of fauna were lower in areas affected by winter recreation when compared with undisturbed areas. For most regions and taxa, however, empirical evidence remains too limited to identify clear impacts of winter recreation. We therefore conclude that the majority of ski resorts are operating in the absence of knowledge needed to inform effective strategies for biodiversity conservation and ecologically-sound management. Thus, there is an urgent need for more empirical research to be conducted throughout this increasingly threatened ecological community, especially given the indication from the available literature that fauna often respond negatively to winter recreation.

  13. The Effects of Winter Recreation on Alpine and Subalpine Fauna: A Systematic Review and Meta-Analysis

    Science.gov (United States)

    Sato, Chloe F.; Wood, Jeff T.; Lindenmayer, David B.

    2013-01-01

    The ski industry is often perceived as having a negative impact on sensitive alpine and subalpine communities. However, empirical evidence of such impacts is lacking. We reviewed the available literature from the last 35 years to quantify the reported effects of winter recreation on faunal communities. Overall, using one-sample binomial tests (‘sign tests’) we found that the effects of all types of winter recreation-related disturbances (i.e. ski runs, resort infrastructure and winter tourism) were more likely to be negative or have no effect, than be positive for wildlife. More specifically, in Europe, where the majority of the available research was conducted, the impacts of winter recreation were most often negative for fauna. In terms of specific taxa, birds and to a lesser extent mammals and arthropods, responded negatively to disturbance. Results from our meta-analysis confirmed the results from our binomial tests. Richness, abundance and diversity of fauna were lower in areas affected by winter recreation when compared with undisturbed areas. For most regions and taxa, however, empirical evidence remains too limited to identify clear impacts of winter recreation. We therefore conclude that the majority of ski resorts are operating in the absence of knowledge needed to inform effective strategies for biodiversity conservation and ecologically-sound management. Thus, there is an urgent need for more empirical research to be conducted throughout this increasingly threatened ecological community, especially given the indication from the available literature that fauna often respond negatively to winter recreation. PMID:23691190

  14. Using time scales to characterize phytoplankton assemblages in a deep subalpine lake during the thermal stratification period: Lake Iseo, Italy

    Science.gov (United States)

    Marti, Clelia Luisa; Imberger, Jörg; Garibaldi, Letizia; Leoni, Barbara

    2016-03-01

    A combination of field observations and 3-D hydrodynamic simulations were used to identify the phytoplankton species and to estimate the various time scales of the dominant physical and biological processes in Lake Iseo, a deep subalpine lake located in northern Italy, during a stratified period (July 2010). By ordering the rate processes time scales, we derive a phytoplankton patch categorization and growth interpretation that provides a general framework for the spatial distribution of phytoplankton concentration in Lake Iseo and illuminates the characteristics of their ecological niches. The results show that the diurnal surface layer was well mixed, received strong diurnal radiation, had low phosphorus concentrations and the phytoplankton biomass was sustained by the green alga Sphaerocystis schroeterii. The vertical mixing time scales were much shorter than horizontal mixing time scales causing a depth-uniform chlorophyll a concentration. The horizontal patch scale was determined by horizontal dispersion balancing the phytoplankton growth time scale, dictating the success of the observed green algae. The strongly stratified nutrient-rich metalimnion had mild light conditions and Diatoma elongatum and Planktothrix rubescens made up the largest proportions of the total phytoplankton biomass at the intermediate and deeper metalimnetic layers. The vertical transport time scales were much shorter than horizontal transport and vertical dispersion leading to growth niche for the observed phytoplankton. The study showed that time-scale hierarchy mandates the essential phytoplankton attributes or traits for success in a particular section of the water column and/or water body.

  15. Using functional traits to assess the resistance of subalpine grassland to trampling by mountain biking and hiking.

    Science.gov (United States)

    Pickering, Catherine Marina; Barros, Agustina

    2015-12-01

    Functional traits reflect plant responses to disturbance, including from visitor impacts. The impacts of mountain biking and hiking on functional composition were compared using a common experimental protocol in a subalpine grassland in the Australian Alps. The overlapping cover of all species was recorded two weeks after different intensities of hiking (200 and 500 passes) and mountain biking (none, 25, 75, 200 and 500 passes). Species' functional trait data were combined with their relative cover to calculate community trait weighted means for plant height, leaf area, percentage leaf dry matter content and Specific Leaf Area (SLA). Species such as Poa fawcettiae with larger leaves and SLA but lower dry weight content of leaves were more resistant to use, with differences between bikers and hikers only apparent at the highest levels of use tested. This differs from some vegetation communities in Europe where plants with smaller leaves were more resistant to hiking. More research using functional traits may account for differences in species responses to trampling. Managers of conservation areas used for hiking and biking need to minimise off trail use by both user groups. Copyright © 2015 Elsevier Ltd. All rights reserved.

  16. Virtual disjunct eddy covariance measurements of organic compound fluxes from a subalpine forest using proton transfer reaction mass spectrometry

    Directory of Open Access Journals (Sweden)

    T. G. Karl

    2002-01-01

    Full Text Available A `virtual' disjunct eddy covariance (vDEC device was tested with field measurements of biogenic VOC fluxes at a subalpine forest site in the Rocky Mountains of the USA. A PTR-MS instrument was used as the VOC sensor. Daily peak emission fluxes of 2-methyl-3-buten-2-ol (MBO, methanol, acetone and acetaldehyde were around 1.5, 1, 0.8 and 0.4 mg m-2 h-1, respectively. High pass filtering due to long sampling lines was investigated in laboratory experiments, and suggested that VOC losses in PTFA lines are generally governed by diffusion laws. Memory effects and surface reactions did not seem to play a dominant role. Model estimates of MBO fluxes compared well with measured fluxes. The results also suggest that latent heat and sensible heat fluxes are reasonably well correlated with VOC fluxes and could be used to predict variations in VOC emissions. The release of MBO, methanol, acetone and acetaldehyde resulted in significant change of tropospheric oxidant levels and a 10--40% increase in ozone levels, as inferred from a photochemical box model. We conclude that vDEC with a PTR-MS instrument is a versatile tool for simultaneous field analysis of multiple VOC fluxes.

  17. Complex terrain alters temperature and moisture limitations of forest soil respiration across a semiarid to subalpine gradient

    Science.gov (United States)

    Berryman, Erin Michele; Barnard, H.R.; Adams, H.R.; Burns, M.A.; Gallo, E.; Brooks, P.D.

    2015-01-01

    Forest soil respiration is a major carbon (C) flux that is characterized by significant variability in space and time. We quantified growing season soil respiration during both a drought year and a nondrought year across a complex landscape to identify how landscape and climate interact to control soil respiration. We asked the following questions: (1) How does soil respiration vary across the catchments due to terrain-induced variability in moisture availability and temperature? (2) Does the relative importance of moisture versus temperature limitation of respiration vary across space and time? And (3) what terrain elements are important for dictating the pattern of soil respiration and its controls? Moisture superseded temperature in explaining watershed respiration patterns, with wetter yet cooler areas higher up and on north facing slopes yielding greater soil respiration than lower and south facing areas. Wetter subalpine forests had reduced moisture limitation in favor of greater seasonal temperature limitation, and the reverse was true for low-elevation semiarid forests. Coincident climate poorly predicted soil respiration in the montane transition zone; however, antecedent precipitation from the prior 10 days provided additional explanatory power. A seasonal trend in respiration remained after accounting for microclimate effects, suggesting that local climate alone may not adequately predict seasonal variability in soil respiration in montane forests. Soil respiration climate controls were more strongly related to topography during the drought year highlighting the importance of landscape complexity in ecosystem response to drought.

  18. The effects of winter recreation on alpine and subalpine fauna: a systematic review and meta-analysis.

    Science.gov (United States)

    Sato, Chloe F; Wood, Jeff T; Lindenmayer, David B

    2013-01-01

    The ski industry is often perceived as having a negative impact on sensitive alpine and subalpine communities. However, empirical evidence of such impacts is lacking. We reviewed the available literature from the last 35 years to quantify the reported effects of winter recreation on faunal communities. Overall, using one-sample binomial tests ('sign tests') we found that the effects of all types of winter recreation-related disturbances (i.e. ski runs, resort infrastructure and winter tourism) were more likely to be negative or have no effect, than be positive for wildlife. More specifically, in Europe, where the majority of the available research was conducted, the impacts of winter recreation were most often negative for fauna. In terms of specific taxa, birds and to a lesser extent mammals and arthropods, responded negatively to disturbance. Results from our meta-analysis confirmed the results from our binomial tests. Richness, abundance and diversity of fauna were lower in areas affected by winter recreation when compared with undisturbed areas. For most regions and taxa, however, empirical evidence remains too limited to identify clear impacts of winter recreation. We therefore conclude that the majority of ski resorts are operating in the absence of knowledge needed to inform effective strategies for biodiversity conservation and ecologically-sound management. Thus, there is an urgent need for more empirical research to be conducted throughout this increasingly threatened ecological community, especially given the indication from the available literature that fauna often respond negatively to winter recreation.

  19. Transcriptome analysis of immature xylem in the Chinese fir at different developmental phases

    Directory of Open Access Journals (Sweden)

    Yunxing Zhang

    2016-06-01

    Full Text Available Background.Chinese fir [Cunninghamia lanceolata (Lamb. Hook.] is one of the most important native tree species for timber production in southern China. An understanding of overall fast growing stage, stem growth stage and senescence stage cambium transcriptome variation is lacking. We used transcriptome sequencing to identify the repertoire of genes expressed during development of xylem tissue in Chinese fir, aiming to delineate the molecular mechanisms of wood formation. Results. We carried out transcriptome sequencing at three different cultivation ages (7Y, 15Y and 21Y generating 68.71 million reads (13.88 Gbp. A total of 140,486 unigenes with a mean size of 568.64 base pairs (bp were obtained via de novo assembly. Of these, 27,427 unigenes (19.52% were further annotated by comparison to public protein databases. A total of 5,331 (3.79% unigenes were mapped into 118 pathways by searching against the Kyoto Encyclopedia of Genes and Genomes Pathway database (KEGG. Differentially expressed genes (DEG analysis identified 3, 16 and 5,899 DEGs from the comparison of 7Y vs. 15Y, 7Y vs. 21Y and 15Y vs. 21Y, respectively, in the immature xylem tissues, including 2,638 significantly up-regulated and 3,280 significantly down-regulated genes. Besides, five NAC transcription factors, 190 MYB transcription factors, and 34 WRKY transcription factors were identified respectively from Chinese fir transcriptome. Conclusion. Our results revealed the active transcriptional pathways and identified the DEGs at different cultivation phases of Chinese fir wood formation. This transcriptome dataset will aid in understanding and carrying out future studies on the molecular basis of Chinese fir wood formation and contribute to future artificial production and applications.

  20. A census of radio-selected AGNs on the COSMOS field and of their FIR properties

    Science.gov (United States)

    Magliocchetti, M.; Popesso, P.; Brusa, M.; Salvato, M.

    2018-01-01

    We use the new catalogue by Laigle et al. to provide a full census of VLA-COSMOS radio sources. We identify 90 per cent of such sources and sub-divide them into active galactic nuclei (AGNs) and star-forming galaxies on the basis of their radio luminosity. The AGN sample is complete with respect to radio selection at all z ≲ 3.5. Out of 704 AGNs, 272 have a counterpart in the Herschel maps. By exploiting the better statistics of the new sample, we confirm the results of Magliocchetti et al.: the probability for a radio-selected AGN to be detected at far-infrared (FIR) wavelengths is both a function of radio luminosity and redshift, whereby powerful sources are more likely FIR emitters at earlier epochs. Such an emission is due to star-forming processes within the host galaxy. FIR emitters and non-FIR emitters only differentiate in the z ≲ 1 universe. At higher redshifts, they are indistinguishable from each other, as there is no difference between FIR-emitting AGNs and star-forming galaxies. Lastly, we focus on radio AGNs which show AGN emission at other wavelengths. We find that mid-infrared (MIR) emission is mainly associated with ongoing star formation and with sources which are smaller, younger and more radio luminous than the average parent population. X-ray emitters instead preferentially appear in more massive and older galaxies. We can therefore envisage an evolutionary track whereby the first phase of a radio-active AGN and of its host galaxy is associated with MIR emission, while at later stages the source becomes only active at radio wavelengths and possibly also in the X-ray.

  1. Lignin distribution in waterlogged archaeological Picea abies (L.) Karst degraded by erosion bacteria

    DEFF Research Database (Denmark)

    Pedersen, Nanna Bjerregaard; Schmitt, Uwe Schmitt; Koch, Gerald

    2014-01-01

    The lignin distribution in poles of waterlogged archaeological Picea abies (L.) Karst, which was decayed by erosion bacteria (EB) under anoxic conditions for approximately 400 years, was topochemically identified by transmission electron microscopy (TEM) and high resolution UV-microspectrophotome...... evidence for disassembly of lignin during degradation combined with aggregation of lignin fragments and physical movement of these fractions. In contrast to TEM analysis, locally decreasing lignin content was found by UMSP in CML regions.......The lignin distribution in poles of waterlogged archaeological Picea abies (L.) Karst, which was decayed by erosion bacteria (EB) under anoxic conditions for approximately 400 years, was topochemically identified by transmission electron microscopy (TEM) and high resolution UV...

  2. Long-term responses of canopy-understorey interactions to disturbance severity in primary Picea abies forests

    Czech Academy of Sciences Publication Activity Database

    Bače, R.; Schurman, J.S.; Brabec, Marek; Čada, V.; Deprés, T.; Janda, P.; Lábusová, J.; Mikoláš, M.; Morrissey, R. C.; Mrhalová, H.; Nagel, T.A.; Nováková, M. H.; Seedre, M.; Synek, M.; Trotsiuk, V.; Svoboda, M.

    2017-01-01

    Roč. 28, č. 6 (2017), s. 1128-1139 ISSN 1100-9233 Grant - others:GA ČR(CZ) GA15-14840S Institutional support: RVO:67985807 Keywords : Disturbance regime * Natural regeneration * Primary forest * Picea abies (L.) Karst * Windstorms * Bark beetle * Understory light availability * Saplings and poles * Canopy openness * Mountain forest Subject RIV: BB - Applied Statistics, Operational Research Impact factor: 2.924, year: 2016

  3. Regulation of somatic embryo development in Norway spruce (Picea abies). A molecular approach to the characterization of specific developmental stages

    Energy Technology Data Exchange (ETDEWEB)

    Sabala, I. [Swedish Univ. of Agricultural Sciences, Uppsala (Sweden). Dept. of Forest Genetics

    1998-12-31

    Embryo development is a complex process involving a set of strictly regulated events. The regulation of these events is poorly understood especially during the early stages of embryo development. Somatic embryos go through the same developmental stages as zygotic embryos making them an ideal model system for studying the regulation of embryo development. We have used embryogenic cultures of Picea abies to study some aspects of the regulation of embryo development in gymnosperms. The bottle neck during somatic embryogenesis is the switch from the proliferation stage to the maturation stage. This switch is initiated by giving somatic embryos a maturation treatment i.e. the embryos are treated with abscisic acid (ABA). Somatic embryos which respond to ABA by forming mature somatic embryos were stimulated to secret a 70 kDa protein, AF70. The af70 gene was isolated and characterised. The expression of the af70 gene was constitutive in embryos but was highly ABA-induced in seedlings. Moreover, expression of this gene was stimulated during cold acclimation of Picea abies seedlings. A full length Picea abies cDNA clone Pa18, encoding a protein with the characteristics of plant lipid transfer proteins (LTPs), was isolated and characterised. The Pa18 gene is constitutively expressed in embryogenic cultures of Picea abies representing different stages of development as well as in nonembryogenic callus and seedlings. In situ hybridization showed that Pa18 gene is expressed in all embryonic cells of proliferating somatic embryos but the expression of the gene in mature somatic and zygotic embryos is restricted to the outer cell layer. Southern blot analysis at different stringencies was consistent with a single gene. An alteration in expression of Pa18 causes disturbance in the formation of the proper outer cell layer in the maturing somatic embryos. In addition to its influence on embryo development the Pa18 gene product also inhibits growth of Agrobacterium tumefaciens 195

  4. Comparison of the Calibration Algorithms and SI Traceability of MODIS, VIIRS, GOES, and GOES-R ABI Sensors

    OpenAIRE

    Raju Datla; Xi Shao; Changyong Cao; Xiangqian Wu

    2016-01-01

    The radiometric calibration equations for the thermal emissive bands (TEB) and the reflective solar bands (RSB) measurements of the earth scenes by the polar satellite sensors, (Terra and Aqua) MODIS and Suomi NPP (VIIRS), and geostationary sensors, GOES Imager and the GOES-R Advanced Baseline Imager (ABI) are analyzed towards calibration algorithm harmonization on the basis of SI traceability which is one of the goals of the NOAA National Calibration Center (NCC). One of the overarching goal...

  5. Natural decay process affects the abundance and community structure of Bacteria and Archaea in Picea abies logs

    DEFF Research Database (Denmark)

    Rinta-Kanto, J. M.; Sinkko, H.; Rajala, T.

    2016-01-01

    Prokaryotes colonize decaying wood and contribute to the degradation process, but the dynamics of prokaryotic communities during wood decay is still poorly understood. We studied the abundance and community composition of Bacteria and Archaea inhabiting naturally decaying Picea abies logs...... fungal-bacterial interactions may also affect the distribution of bacterial taxa in decaying wood. Thaumarchaeota were prominent members of the archaeal populations colonizing decaying wood, providing further evidence of the versatility and cosmopolitan nature of this phylum in the environment...

  6. A Bifunctional Geranyl and Geranylgeranyl Diphosphate Synthase Is Involved in Terpene Oleoresin Formation in Picea abies1[W][OA

    Science.gov (United States)

    Schmidt, Axel; Wächtler, Betty; Temp, Ulrike; Krekling, Trygve; Séguin, Armand; Gershenzon, Jonathan

    2010-01-01

    The conifer Picea abies (Norway spruce) defends itself against herbivores and pathogens with a terpenoid-based oleoresin composed chiefly of monoterpenes (C10) and diterpenes (C20). An important group of enzymes in oleoresin biosynthesis are the short-chain isoprenyl diphosphate synthases that produce geranyl diphosphate (C10), farnesyl diphosphate (C15), and geranylgeranyl diphosphate (C20) as precursors of different terpenoid classes. We isolated a gene from P. abies via a homology-based polymerase chain reaction approach that encodes a short-chain isoprenyl diphosphate synthase making an unusual mixture of two products, geranyl diphosphate (C10) and geranylgeranyl diphosphate (C20). This bifunctionality was confirmed by expression in both prokaryotic (Escherichia coli) and eukaryotic (P. abies embryogenic tissue) hosts. Thus, this isoprenyl diphosphate synthase, designated PaIDS1, could contribute to the biosynthesis of both major terpene types in P. abies oleoresin. In saplings, PaIDS1 transcript was restricted to wood and bark, and transcript level increased dramatically after methyl jasmonate treatment, which induces the formation of new (traumatic) resin ducts. Polyclonal antibodies localized the PaIDS1 protein to the epithelial cells surrounding the traumatic resin ducts. PaIDS1 has a close phylogenetic relationship to single-product conifer geranyl diphosphate and geranylgeranyl diphosphate synthases. Its catalytic properties and reaction mechanism resemble those of conifer geranylgeranyl diphosphate synthases, except that significant quantities of the intermediate geranyl diphosphate are released. Using site-directed mutagenesis and chimeras of PaIDS1 with single-product geranyl diphosphate and geranylgeranyl diphosphate synthases, specific amino acid residues were identified that alter the relative composition of geranyl to geranylgeranyl diphosphate. PMID:19939949

  7. Mechanisms of Abnormal Growth Regulation in Prostatic Adenocarcinoma Using Abi1/Hssh3bp1 Conditional Knockout Mouse Model

    Science.gov (United States)

    2009-06-01

    predominant component of the multi-dimensional protein network of the membrane skeleton underlying the lipid bilayer of red cells. Mutations that affect...remodeling near the plasma membrane ( Ibarra et al., 2005). Overexpression of Abi/Hssh3bp1 in NIH 3T3 cells inhibits macropinocytic uptake of...populations. J Cell Biol. 124:689-703. Ibarra , N., A. Pollitt, and R.H. Insall. 2005. Regulation of actin assembly by SCAR/WAVE proteins. Biochem

  8. Influence of low- and high-elevation plant genomes on the regulation of autumn cold acclimation in Abies sachalinensis

    OpenAIRE

    Wataru eIshizuka; Kiyomi eOno; Toshihiko eHara; Susumu eGoto

    2015-01-01

    Boreal coniferous species with wide geographic distributions show substantial variation in autumn cold acclimation among populations. To determine how this variation is inherited across generations, we conducted a progeny test and examined the development of cold hardening in open-pollinated second-generation (F2) progeny of Abies sachalinensis. The F1 parents had different genetic backgrounds resulting from reciprocal interpopulational crosses between low-elevation (L) and high-elevation (H)...

  9. Norway spruce (Picea abies) laccases: characterization of a laccase in a lignin-forming tissue culture.

    Science.gov (United States)

    Koutaniemi, Sanna; Malmberg, Heli A; Simola, Liisa K; Teeri, Teemu H; Kärkönen, Anna

    2015-04-01

    Secondarily thickened cell walls of water-conducting vessels and tracheids and support-giving sclerenchyma cells contain lignin that makes the cell walls water impermeable and strong. To what extent laccases and peroxidases contribute to lignin biosynthesis in muro is under active evaluation. We performed an in silico study of Norway spruce (Picea abies (L.) Karst.) laccases utilizing available genomic data. As many as 292 laccase encoding sequences (genes, gene fragments, and pseudogenes) were detected in the spruce genome. Out of the 112 genes annotated as laccases, 79 are expressed at some level. We isolated five full-length laccase cDNAs from developing xylem and an extracellular lignin-forming cell culture of spruce. In addition, we purified and biochemically characterized one culture medium laccase from the lignin-forming cell culture. This laccase has an acidic pH optimum (pH 3.8-4.2) for coniferyl alcohol oxidation. It has a high affinity to coniferyl alcohol with an apparent Km value of 3.5 μM; however, the laccase has a lower catalytic efficiency (V(max)/K(m)) for coniferyl alcohol oxidation compared with some purified culture medium peroxidases. The properties are discussed in the context of the information already known about laccases/coniferyl alcohol oxidases of coniferous plants. © 2015 Institute of Botany, Chinese Academy of Sciences.

  10. Resonance wood [Picea abies (L.) Karst.]--evaluation and prediction of violin makers' quality-grading.

    Science.gov (United States)

    Buksnowitz, Christoph; Teischinger, Alfred; Müller, Ulrich; Pahler, Andreas; Evans, Robert

    2007-04-01

    The definition of quality in the field of resonance wood for musical instrument making has attracted considerable interest over decades but has remained incomplete. The current work compares the traditional knowledge and practical experience of violin makers with a material-science approach to objectively characterize the properties of resonance wood. Norway spruce [Picea abies (L.) Karst.] has earned a very high reputation for the construction of resonance tops of stringed instruments and resonance boards of keyboard instruments, and was therefore chosen as the focus of the investigation. The samples were obtained from numerous renowned resonance wood regions in the European Alps and cover the whole range of available qualities. A set of acoustical, anatomical, mechanical and optical material properties was measured on each sample. These measurements were compared with subjective quality grading by violin makers, who estimated the acoustical, optical and overall suitability for violin making. Multiple linear regression models were applied to evaluate the predictability of the subjective grading using the measured material characteristics as predictors. The results show that luthiers are able to estimate wood quality related to visible features, but predictions of mechanical and acoustical properties proved to be very poor.

  11. FACTORES DE INFLUENCIA EN EL ENRAIZAMIENTO DE ESTACAS DE Abies religiosa (Kunth Schltdl. et Cham

    Directory of Open Access Journals (Sweden)

    J. Daniel Castillo-Flores

    2013-01-01

    Full Text Available La declinación forestal en el Desierto de los Leones, D. F. afecta a Abies religiosa, una de las especies dominantes en la región con difícil capacidad de enraizamiento que requiere propagación en la zona. En el presente estudio se desarrolló un método de propagación vegetativa con el fin de determinar si el efecto de la procedencia, edad del material, tipo de hormona y la presencia de síntomas de declinación, influyen en la capacidad de enraizamiento de estacas de dicha especie. En este experimento se utilizó un sustrato compuesto por turba y agrolita para probar estacas de dos procedencias, con y sin síntomas de declinación, generadas en dos estaciones de crecimiento, y dos auxinas, manteniendo una humedad de 75-80 %. La combinación de estos factores produjo 16 tratamientos, los cuales se repitieron 50 veces. Los datos fueron procesados mediante un análisis de varianza factorial. Los resultados indican que a principios de diciembre es la mejor época de recolecta de material vegetal para enraizamiento de estacas de A. religiosa, siendo las estacas más jóvenes y las que recibieron indol-3-butírico las que mejor enraizaron. La procedencia y la sintomatología no tuvieron efecto en el enraizamiento.

  12. Complex bud architecture and cell-specific chemical patterns enable supercooling of Picea abies bud primordia.

    Science.gov (United States)

    Kuprian, Edith; Munkler, Caspar; Resnyak, Anna; Zimmermann, Sonja; Tuong, Tan D; Gierlinger, Notburga; Müller, Thomas; Livingston, David P; Neuner, Gilbert

    2017-12-01

    Bud primordia of Picea abies, despite a frozen shoot, stay ice free down to -50 °C by a mechanism termed supercooling whose biophysical and biochemical requirements are poorly understood. Bud architecture was assessed by 3D-reconstruction, supercooling and freezing patterns by infrared video thermography, freeze dehydration and extraorgan freezing by water potential measurements, and cell-specific chemical patterns by Raman microscopy and mass spectrometry imaging. A bowl-like ice barrier tissue insulates primordia from entrance by intrinsic ice. Water repellent and densely packed bud scales prevent extrinsic ice penetration. At -18 °C, break-down of supercooling was triggered by intrinsic ice nucleators whereas the ice barrier remained active. Temperature-dependent freeze dehydration (-0.1 MPa K-1 ) caused accumulation of extraorgan ice masses that by rupture of the shoot, pith tissue are accommodated in large voids. The barrier tissue has exceptionally pectin-rich cell walls and intercellular spaces, and the cell lumina were lined or filled with proteins, especially near the primordium. Primordial cells close to the barrier accumulate di, tri and tetrasaccharides. Bud architecture efficiently prevents ice penetration, but ice nucleators become active inside the primordium below a temperature threshold. Biochemical patterns indicate a complex cellular interplay enabling supercooling and the necessity for cell-specific biochemical analysis. © 2017 The Authors Plant, Cell & Environment Published by John Wiley & Sons Ltd.

  13. Shoot growth of mature Fagus sylvatica and Picea abies in relation to ozone

    Energy Technology Data Exchange (ETDEWEB)

    Braun, Sabine [Institute for Applied Plant Biology, Sandgrubenstrasse 25, CH-4124 Schoenenbuch (Switzerland)]. E-mail: sabine.braun@iap.ch; Schindler, Christian [Institute for Social and Preventive Medicine, University of Basel, Steinengraben 49, CH-4051 Basel (Switzerland)]. E-mail: christian.schindler@unibas.ch; Rihm, Beat [Meteotest, Fabrikstrasse 14, CH-3012 Berne (Switzerland)]. E-mail: rihm@meteotest.ch; Flueckiger, Walter [Institute for Applied Plant Biology, Sandgrubenstrasse 25, CH-4124 Schoenenbuch (Switzerland)

    2007-04-15

    Epidemiological analysis of sequential growth data may be a tool in assessing ozone sensitivity of mature trees. Annual shoot growth of mature Fagus sylvatica in 83 Swiss permanent forest observation plots and of Picea abies in 61 plots was evaluated for 11 and 8 consecutive years, respectively, using branches harvested every 4 years. The data were assessed as annual deviation from average growth and related to fructification, ozone, meteorological parameters, and modelled soil water content using a mixed linear model. In beech, a significant association between ozone and shoot growth was observed which corresponded to a 7.4% growth reduction between 0 and 10 ppm h AOT40 (accumulated ozone over threshold 40). This is in the same order of magnitude as the response observed in experiments with seedlings. No interaction was found between ozone and drought parameters. In Norway spruce, shoot growth was neither associated with ozone nor with drought. - Epidemiological assessment of shoot growth suggests an ozone sensitivity of mature beech which is similar to seedlings.

  14. Post-fire effects in xylem hydraulics of Picea abies, Pinus sylvestris and Fagus sylvatica.

    Science.gov (United States)

    Bär, Andreas; Nardini, Andrea; Mayr, Stefan

    2017-11-28

    Recent studies on post-fire tree mortality suggest a role for heat-induced alterations of the hydraulic system. We analyzed heat effects on xylem hydraulics both in the laboratory and at a forest site hit by fire. Stem vulnerability to drought-induced embolism and hydraulic conductivity were measured in Picea abies, Pinus sylvestris and Fagus sylvatica. Control branches were compared with samples experimentally exposed to 90°C or damaged by a natural forest fire. In addition, xylem anatomical changes were examined microscopically. Experimental heating caused structural changes in the xylem and increased vulnerability in all species. The largest shifts in vulnerability thresholds (1.3 MPa) were observed in P. sylvestris. F. sylvatica also showed heat-induced reductions (49%) in hydraulic conductivity. At the field site, increased vulnerability was observed in damaged branches of P. sylvestris and F. sylvatica, and the xylem of F. sylvatica was 39% less conductive in damaged than in undamaged branches. These results provide evidence for heat-induced impairment of tree hydraulics after fire. The effects recorded at the forest fire site corresponded to those obtained in laboratory experiments, and revealed pronounced hydraulic risks in P. sylvestris and F. sylvatica. Knowledge of species-specific hydraulic impairments induced by fire and heat is a prerequisite for accurate estimation of post-fire mortality risks. © 2017 The Authors. New Phytologist © 2017 New Phytologist Trust.

  15. Review of Lepidoptera with trophic relationships to Picea abies (L. in the conditions of Czechia

    Directory of Open Access Journals (Sweden)

    Modlinger Roman

    2016-12-01

    Full Text Available Trophic relationships of Lepidoptera (Insecta occurring in the territory of Czechia to the Norway spruce (Picea abies L. was evaluated on the basis of the excerption and critical evaluation of literature. Each species was classified into the following categories – spruce as the host plant, regular development on spruce, narrow trophic relationship, indirect relationship and episodical occurrence. The particular taxa were also characterized according to their distribution and the form of larval life was specified. The development on spruce was documented in 96 species of Lepidoptera, which represented less than 3% of taxa belonging to this group and being reported from Czechia. Of that, spruce was a common host plant for 67 species, 23 species were polyphagous and might develop on spruce, and 6 species belonged to soil species damaging spruce roots, mainly in forest nurseries. Among the species of Lepidoptera, which regularly develop on spruce in the Czech conditions, 55 species were classified. As narrow specialists with special trophic relationship to spruce, 33 taxa could be considered. There were 15 spruce species with forestry importance, which were able to outbreak their populations regularly or irregularly. Among spruce species it was possible to classify 16 taxa as rare. The provided information on Lepidoptera with trophic relationship to spruce is applicable also for other Central European areas. Besides the species with importance for forest pest management, also rare taxa, which can become endangered by climate change or by forest management, were indicated.

  16. Induction of adventitious buds on buds of Norway spruce (picea abies) grown in vitro

    Energy Technology Data Exchange (ETDEWEB)

    Von Arnold, S.; Eriksson, T.

    1979-01-01

    Isolated resting vegetative buds of P. abies were cultured on a defined medium to which auxins or cytokinins were added. At concentrations of 10 to the power of -6 to 10 to the power of -4 M, 6-benzylaminopurine (BAP) or 6-(3-methyl-2-buten-1-ylamino)-purine (2iP) induced formation of adentitious bud primordia; these arose from meristems formed de novo in the needle primordia. Adventitious buds developed when these buds were transferred to medium lacking cytokinin. At lower concentrations of BAP or 2iP, only elongation of needle primordia was induced; at higher concentrations, buds were killed. Other growth regulators induced only needle primordia elongation and were also lethal at higher concentrations. No major differences were found in the ability to form adventitious buds among buds from: a 75-year-old hedge, 5-year-old greenhouse-grown plants, and trees in a stand near Uppsala, Sweden ranging in age from 5 to 50 year old.

  17. Effect of light intensities on the photosynthetic characteristics of Abies holophylla seedlings from different provenances

    Directory of Open Access Journals (Sweden)

    Z. Yao

    2014-12-01

    Full Text Available The photosynthetic characteristics of Abies holophylla seedlings from six provenances under four artificial light intensities in a greenhouse (full light, 75.08%, 55.42%, and 30.38% of full light were studied to explore the underlying genetic differences in foliar photosynthesis. Varying light intensities significantly affected the foliar photosynthetic parameters of A. holophylla seedlings from six provenances. As the light intensity dropped, the foliar CO2 assimilation capacity of A. holophylla seedlings sharply decreased, and the foliar light utilization capacity significantly increased. Analysis of genetic variation showed highly significant differences in terms of CO2 assimilation capacity, light utilization capacity, and respiration depletion of A. holophylla seedlings among different provenances under different light intensities. The variations were mainly controlled by the genetic factors of the provenance itself. The obtained results revealed that different sensitivities of A. holophylla seedlings from different provenances in response to changed light intensities elicited significant differences in foliar photosynthesis among different provenances. The relationships between sensitivities and annual temperature difference, mean temperature in January, and mean annual evaporation of provenance were found to be the most closely related, which indicated that temperature range and effective precipitation of provenance were the main factors that affected photosynthetic plasticity of A. holophylla seedlings. 

  18. Taxonomic diversity and structure of benthic macroinvertebrates in Aby Lagoon (Ivory Coast, West Africa).

    Science.gov (United States)

    Kouadio, K N; Diomandé, D; Ouattara, A; Koné, Y J M; Gourène, G

    2008-09-15

    The benthic macroinvertebrates of Aby lagoon (West Africa: Ivory coast) was studied during four seasons (high dry season, high rainy season, low dry season and low rainy season, respectively) from June 2006 to March 2007. The distribution of the benthic macroinvertebrates species was recorded at 13 stations on the whole of the lagoon. A total of 62 taxa of benthic macroinvertebrates belonging to 28 families and 10 orders were listed. The molluscs and crustaceans dominate qualitatively by adding up 51 and 24%, respectively of the total number of organisms. Five taxa (Corbula trigona (20%), Pachymelania aurita (12%), Clibernhardius cooki (7%), Oligochaeta (7%) and Crassostrea gasar (6%) accounted for 52% of total abundance. Classification analysis used to perform the characterisation of the lagoon on the basis of benthic macroinvertebrates showed the existence of four main clusters in which the seasonal pattern in benthic macroinvertebrates were very similar in the four seasons. In contrast the species richness and diversity indices were significantly different. Furthermore these indices where higher in the stations closer to the sea and surrounded by mangrove trees (southern area) compared to the inland ones.

  19. Conserved function of core clock proteins in the gymnosperm Norway spruce (Picea abies L. Karst).

    Science.gov (United States)

    Karlgren, Anna; Gyllenstrand, Niclas; Källman, Thomas; Lagercrantz, Ulf

    2013-01-01

    From studies of the circadian clock in the plant model species Arabidopsis (Arabidopsis thaliana), a number of important properties and components have emerged. These include the genes CIRCADIAN CLOCK ASSOCIATED 1 (CCA1), GIGANTEA (GI), ZEITLUPE (ZTL) and TIMING OF CAB EXPRESSION 1 (TOC1 also known as PSEUDO-RESPONSE REGULATOR 1 (PRR1)) that via gene expression feedback loops participate in the circadian clock. Here, we present results from ectopic expression of four Norway spruce (Picea abies) putative homologs (PaCCA1, PaGI, PaZTL and PaPRR1) in Arabidopsis, their flowering time, circadian period length, red light response phenotypes and their effect on endogenous clock genes were assessed. For PaCCA1-ox and PaZTL-ox the results were consistent with Arabidopsis lines overexpressing the corresponding Arabidopsis genes. For PaGI consistent results were obtained when expressed in the gi2 mutant, while PaGI and PaPRR1 expressed in wild type did not display the expected phenotypes. These results suggest that protein function of PaCCA1, PaGI and PaZTL are at least partly conserved compared to Arabidopsis homologs, however further studies are needed to reveal the protein function of PaPRR1. Our data suggest that components of the three-loop network typical of the circadian clock in angiosperms were present before the split of gymnosperms and angiosperms.

  20. Conserved function of core clock proteins in the gymnosperm Norway spruce (Picea abies L. Karst.

    Directory of Open Access Journals (Sweden)

    Anna Karlgren

    Full Text Available From studies of the circadian clock in the plant model species Arabidopsis (Arabidopsis thaliana, a number of important properties and components have emerged. These include the genes CIRCADIAN CLOCK ASSOCIATED 1 (CCA1, GIGANTEA (GI, ZEITLUPE (ZTL and TIMING OF CAB EXPRESSION 1 (TOC1 also known as PSEUDO-RESPONSE REGULATOR 1 (PRR1 that via gene expression feedback loops participate in the circadian clock. Here, we present results from ectopic expression of four Norway spruce (Picea abies putative homologs (PaCCA1, PaGI, PaZTL and PaPRR1 in Arabidopsis, their flowering time, circadian period length, red light response phenotypes and their effect on endogenous clock genes were assessed. For PaCCA1-ox and PaZTL-ox the results were consistent with Arabidopsis lines overexpressing the corresponding Arabidopsis genes. For PaGI consistent results were obtained when expressed in the gi2 mutant, while PaGI and PaPRR1 expressed in wild type did not display the expected phenotypes. These results suggest that protein function of PaCCA1, PaGI and PaZTL are at least partly conserved compared to Arabidopsis homologs, however further studies are needed to reveal the protein function of PaPRR1. Our data suggest that components of the three-loop network typical of the circadian clock in angiosperms were present before the split of gymnosperms and angiosperms.

  1. New antibacterial hydrophobic assay reveals Abies balsamea oleoresin activity against Staphylococcus aureus and MRSA.

    Science.gov (United States)

    Coté, Héloïse; Boucher, Marie-Anne; Pichette, André; Roger, Benoit; Legault, Jean

    2016-12-24

    Oleoresin of Abies balsamea (L.) Mill. was used by Native Americans of the boreal forest of Canada and French Canadians to treat various infections, suggesting that oleoresin has antibacterial properties. In this study, the antibacterial activity of whole oleoresin from A. balsamea was investigated against E. coli, S. aureus and two methicillin-resistant S. aureus (MRSA) strains using a new sensitive assay developed to evaluate hydrophobic matrix and compounds. Antibacterial activity of oleoresin was first investigated using dilution and disk diffusion methods against E. coli and S. aureus, and compared to a new sensitive assay for hydrophobic matrix. Moreover, whole oleoresin was analyzed by GC-MS to characterize the composition and to identify the compounds responsible of the antibacterial activity. The results showed that whole oleoresin was inactive against Gram-negative E. coli (MIC90 >90µg/ml) but active against Gram-positive S. aureus and MRSA with MIC90 ranging from 18.2 to 30µg/ml. The oleoresin is mainly composed of monoterpene (28%), sesquiterpenes (2%), and diterpenes (45%). Resin acids were found, in part, responsible for the antibacterial activity of whole oleoresin. Isopimaric acid and levopimaric acid are the most active with a MIC90 of respectively 9.7µg/ml and 10µg/ml. This study supports the use of oleoresin of A. balsamea by the Native Americans and French Canadians to treat bacterial infections due to S. aureus. Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.

  2. Experimental versus modelled water use in mature Norway spruce (Picea abies exposed to elevated CO2

    Directory of Open Access Journals (Sweden)

    Sebastian eLeuzinger

    2012-10-01

    Full Text Available Rising levels of atmospheric CO2 have often been reported to reduce plant water use. Such behaviour is also predicted by standard equations relating photosynthesis, stomatal conductance, and atmospheric CO2 concentration, which form the core of global dynamic vegetation models (DGVMs. Here, we provide first results from a free air CO2 enrichment (FACE experiment with naturally growing, mature (35 m Picea abies (L. (Norway spruce and compare them to simulations by the DGVM LPJ-GUESS. We monitored sap flow, stem water deficit, stomatal conductance, leaf water potential and soil moisture in five 35-40 m tall CO2-treated (550 ppm trees over two seasons. Using LPJ-GUESS, we simulated this experiment using climate data from a nearby weather station. While the model predicted a stable reduction of transpiration of between 9 and 18 % (at concentrations of 550-700ppm atmospheric CO2, the combined evidence from various methods characterising water use in our experimental trees suggest no changes in response to future CO2 concentrations. The discrepancy between the modelled and the experimental results may be a scaling issue: while dynamic vegetation models correctly predict leaf-level responses, they may not sufficiently account for the processes involved at the canopy and ecosystem scale, which could mitigate the first-order stomatal response.

  3. Groundwater quality assessment using geoelectrical and geochemical approaches: case study of Abi area, southeastern Nigeria

    Science.gov (United States)

    Ebong, Ebong D.; Akpan, Anthony E.; Emeka, Chimezie N.; Urang, Job G.

    2017-09-01

    The electrical resistivity technique which involved the Schlumberger depth sounding method and geochemical analyses of water samples collected from boreholes was used to investigate the suitability of groundwater aquifers in Abi for drinking and irrigation purposes. Fifty randomly located electrical resistivity data were collected, modeled, and interpreted after calibration with lithologic logs. Ten borehole water samples were collected and analysed to determine anion, cation concentrations and some physical and chemical parameters, such as water colour, temperature, total dissolved solids, and electrical conductivity. The results show that the lithostratigraphy of the study area is composed of sands, sandstones (fractured, consolidated and loosed), siltstones, shales (compacted and fractured) of the Asu River Group, Eze-Aku Formation which comprises the aquifer units, and the Nkporo Shale Formation. The aquifer conduits are known to be rich in silicate minerals, and the groundwater samples in some locations show a significant amount of Ca2+, Mg2+, and Na+. These cations balanced the consumption of H+ during the hydrolytic alteration of silicate minerals. The geochemical analysis of groundwater samples revealed dominant calcium-magnesium-carbonate-bicarbonate water facies. Irrigation water quality parameters, such as sodium absorption ratio, percentage of sodium, and permeability index, were calculated based on the physico-chemical analyses. The groundwater quality was observed to be influenced by the interaction of some geologic processes but was classified to be good to excellent, indicating its suitability for domestic and irrigation purposes.

  4. Preliminary assessment of the GOES-R ABI hourly land surface albedo and reflectance products prototyped with Himawari AHI data

    Science.gov (United States)

    He, T.; Liang, S.; Zhang, Y.; Yu, Y.

    2016-12-01

    Land surface albedo and reflectance are critical geophysical variables used in climate and environmental applications. The multispectral Advanced Baseline Imager (ABI) onboard the next generation geostationary satellites (GOES-R series, set to launch in late 2016) offers high temporal and medium spatial resolution observations, which can be used for monitoring diurnal variation of surface albedo and reflectance. In the GOES-R data processing chain there is no atmospheric correction to generate surface reflectance product, which is usually required for surface albedo estimation. We propose an optimization method to simultaneously retrieve surface bidirectional reflectance distribution function (BRDF) parameters and aerosol optical depth with GOES-R ABI data on a daily-basis, which are used for estimating surface albedo and reflectance. Before the launch of the GOES-R satellite, our algorithm was prototyped with data from the Advanced Himawari Imager (AHI) onboard the Japanese Himawari-8 satellite, which has spectral bands and spatial resolutions similar to GOES-R ABI. Cal/val activities were carried out against ground measurements at the OzFlux sites in Australia and satellite data including albedo/BRDF products from MODIS and Landsat. The preliminary accuracy assessment showed promising results for both the surface albedo and reflectance estimates. The GOES-R surface albedo and reflectance products will serve as critical inputs for downstream GOES-R satellite products and also help improve climate modeling and weather forecasting with a high temporal resolution.

  5. Natural Regeneration in a Multi-Layered Pinus sylvestris-Picea abies Forest after Target Diameter Harvest and Soil Scarification

    Directory of Open Access Journals (Sweden)

    Lars Drössler

    2017-01-01

    Full Text Available Forest management in Sweden can be characterized by even-aged silviculture heavily relying on three established harvest regimes: clearcutting, the seed-tree method, and the shelterwood system. Less intense, small-scale retention harvest systems such as single tree and group selection harvest are rarely used. In addition, natural regeneration dynamics without enrichment planting have barely been studied. Consequently, this study examined natural regeneration establishment in a multi-layered Pinus sylvestris-Picea abies forest stand in southwest Sweden after target diameter harvesting and soil scarification. The creation of forest canopy gaps had a positive effect on total seedling density five years after harvest, mainly due to a significantly higher number of Betula pendula individuals. Seedling density of more desirable tree species suitable for continuous cover forestry such as Fagus sylvatica, Quercus petraea and Picea abies also increased substantially in gaps when compared to pre-harvest conditions or the unharvested plots. In contrast, soil scarification did not increase the number of seedlings of desired tree species due to a significant decrease in Picea abies abundance. Soil moisture and gap size significantly improved Betula pendula seedling establishment while a larger number of Quercus petraea seedlings were observed in Vaccinium myrtillus patches. We conclude that canopy gaps are beneficial under the encountered stand conditions to initiate forest regeneration, and that soil scarification without the timely occurrence of a mast year of desired tree species is not effective in the type of forest studied.

  6. General Toxicity and Antifungal Activity of a New Dental Gel with Essential Oil from Abies Sibirica L.

    Science.gov (United States)

    Noreikaitė, Aurelija; Ayupova, Rizvangul; Satbayeva, Elmira; Seitaliyeva, Aida; Amirkulova, Marzhan; Pichkhadze, Guram; Datkhayev, Ubaidilla; Stankevičius, Edgaras

    2017-01-29

    BACKGROUND The aim of this study was to analyze the antifungal activity and the general toxicity of a new dental gel containing essential oil from the tree Abies sibirica L., which grows in the Republic of Kazakhstan. MATERIAL AND METHODS The essential oil from Abies sibirica L. was obtained by microwave heating method using the STARTE Microwave Extraction System. Adjutants used to prepare the oil were carbomer 974P, glycerin, polysorbate 80, xylitol, triethanolamine, and purified water, all allowed for medical usage. The antifungal activity of the essential oil was assessed by monitoring the optical density of Candida albicans in a microplate reader. The safety was determined by analyzing the acute and subacute toxicity. RESULTS The essential oil obtained by the microwave heating method revealed a higher antifungal activity in comparison with the essential oil obtained by the steam distillation method. No obvious changes were detected in guinea pigs following cutaneous application of the gel. Enteral administration of the essential oil caused minimal functional and histological changes in mice after 4 weeks. The new harmless dental gel containing pine oil from Abies sibirica L. was provided for the purposes of this particular clinical research. CONCLUSIONS The high antifungal activity of the gel is the basis for more in-depth studies on its safety and pharmacological activity.

  7. ABI5-binding proteins (AFPs) alter transcription of ABA-induced genes via a variety of interactions with chromatin modifiers.

    Science.gov (United States)

    Lynch, Tim J; Erickson, B Joy; Miller, Dusty R; Finkelstein, Ruth R

    2017-03-01

    Overexpression of ABI5/ABF binding proteins (AFPs) results in extreme ABA resistance of seeds via multiple mechanisms repressing ABA response, including interactions with histone deacetylases and the co-repressor TOPLESS. Several ABI5/ABF binding proteins (AFPs) inhibit ABA response, resulting in extreme ABA resistance in transgenic Arabidopsis overexpression lines, but their mechanism of action has remained obscure. By analogy to the related Novel Interactor of JAZ (NINJA) protein, it was suggested that the AFPs interact with the co-repressor TOPLESS to inhibit ABA-regulated gene expression. This study shows that the AFPs that inhibit ABA response have intrinsic repressor activity in a heterologous system, which does not depend on the domain involved in the interaction with TOPLESS. This domain is also not essential for repressing ABA response in transgenic plants, but does contribute to stronger ABA resistance. Additional interactions between some AFPs and histone deacetylase subunits were observed in yeast two-hybrid and bimolecular fluorescence assays, consistent with a more direct mechanism of AFP-mediated repression of gene expression. Chemical inhibition of histone deacetylase activity by trichostatin A suppressed AFP effects on a small fraction of the ABI5-regulated genes tested. Collectively, these results suggest that the AFPs participate in multiple mechanisms modulating ABA response, including both TOPLESS-dependent and -independent chromatin modification.

  8. Mycorrhiza of the host-specific Lactarius deterrimus on the roots of Picea abies and Arctostaphylos uva-ursi.

    Science.gov (United States)

    Mühlmann, O; Göbl, F

    2006-06-01

    The ectomycorrhizal basidiomycete species Lactarius deterrimus Gröger is considered to be a strictly host-specific mycobiont of Picea abies (L.) Karst. However, we identified arbutoid mycorrhiza formed by this fungus on the roots of Arctostaphylos uva-ursi (L.) Spreng. in a mixed stand at the alpine timberline; typical ectomycorrhiza of P. abies were found in close relation. A. uva-ursi is known as an extremely unspecific phytobiont. The mycorrhizae of both associations are described and compared morphologically. The mycorrhiza formed by L. deterrimus on both A. uva-ursi and P. abies show typical ectomycorrhizal features such as a hyphal mantle and a Hartig net. The main difference between the mycorrhizal symbioses with the different phytobionts is the occurrence of intracellular hyphae in the epidermal cells of A. uva-ursi. This emphasizes the importance of the plant partner for mycorrhizal anatomy. This is the first report of a previously considered host-specific ectomycorrhizal fungus in association with A. uva-ursi under natural conditions. The advantages of this loose specificity between the fungus and plant species is discussed.

  9. Variation in phenology and monoterpene patterns of defoliated and nondefoliated Douglas-fir (Pseudotsuga menziesii var. glauca).

    Science.gov (United States)

    Rose-Marie Muzika; Judith Engle; Catherine Parks; Boyd. Wickman

    1993-01-01

    Foliage was collected from paired Douglas-fir (Pseudotsuga menziesii var. glauca (Beissn.) Franco) trees characterized as either "resistant" or "susceptible" western spruce budworm (Choristoneura occidentalis Freeman (Lepidoptera: Tortricidae) attack. Resistant trees produced more...

  10. Effects of manganese and manganese-nitrogen applications on growth and nutrition of Douglas-fir seedlings.

    Science.gov (United States)

    M. A. Radwan; John S. Shumway; Dean S. DeBell

    1979-01-01

    Effects of manganese (Mn) on Douglas-fir grown in soil, with and without urea, and in nutrient solution were investigated. In addition, Mn sorption by forest soils was evaluated. Results show that Douglas-fir does not respond to added Mn and is quite tolerant to high Mn levels. Moreover, Mn sorption by soils is high. It is doubtful that Mn toxicity is of practical...

  11. Mercury in forest mushrooms and topsoil from the Yunnan highlands and the subalpine region of the Minya Konka summit in the Eastern Tibetan Plateau.

    Science.gov (United States)

    Falandysz, Jerzy; Saba, Martyna; Liu, Hong-Gao; Li, Tao; Wang, Ji-Peng; Wiejak, Anna; Zhang, Ji; Wang, Yuan-Zhong; Zhang, Dan

    2016-12-01

    This study aimed to investigate and discuss the occurrence and accumulation of mercury in the fruiting bodies of wild-growing fungi (Macromycetes) collected from montane forests in two regions of southwestern China with differences in soil geochemistry, climate and geographical conditions. Fungal mycelia in soils of the subalpine region of the Minya Konka (Gongga Mountain) in Sichuan and in the highlands of Yunnan efficiently accumulated mercury in fruiting bodies (mushrooms). The examined sites in Yunnan with highly mineralized red and yellow soils showed Hg contents ranging from 0.066 to 0.28 mg kg -1 dry biomass (db) which is roughly similar to the results obtained for samples collected from sites with dark soils relatively rich in organic matter from a remote, the subalpine region of Minya Konka. Due to the remoteness of the subalpine section of Minya Konka, as well as its elevation and climate, airborne mercury from long-range transport could be deposited preferentially on the topsoil and the Hg levels determined in soil samples taken beneath the fruiting bodies were up to 0.48 mg kg -1 dry matter. In Yunnan, with polymetallic soils (Circum-Pacific Mercuriferous Belt), Amanita mushrooms showed mercury in caps of fruiting bodies of up to 7.3 mg kg -1 dry biomass. Geogenic Hg from the mercuriferous belt seems to be the overriding source of mercury accumulated in mushrooms foraged in the regions of Yunnan, while long-range atmospheric transport and subsequent deposition are the mercury sources for specimens foraged in the region of Minya Konka.

  12. Diphyllobothrium latum (Cestoda: Diphyllobothriidea in perch (Perca fluviatilis in three sub-alpine lakes: influence of biotic and abiotic factors on prevalence

    Directory of Open Access Journals (Sweden)

    Orlando PETRINI

    2009-08-01

    Full Text Available In recent years, human diphyllobothriosis has staged a comeback in Swiss, French and Italian sub-alpine regions. The main putative infective source of the causative agent (the tapeworm Diphyllobothrium latum in these areas is perch (Perca fluviatilis. Therefore, the occurrence of D. latum in this fish species was investigated between 2005 and 2008 in the sub-alpine lakes Maggiore, Lugano and Geneva. Prevalence in fish of Lake Maggiore was 14% (n = 880. In Lake Geneva, 5.1% fillets (n = 532 were infected, whereas perch from Lake Lugano were free from the parasite. These results are discussed in relation to previous studies. Data on fish size and weight indicate that infection of perch by D. latum is independent of age and sex. Abiotic factors considered critical for D. latum life cycle (water temperature and oxygen concentration characterize the three basins and were related to their infestation frequencies. The presence of this parasite was most likely favoured by warmer, well oxygenated waters. Previous studies indicate that the lake’s trophic state (i.e. content of total phosphorus influenced the availability of the first intermediate hosts (copepods of some pseudophyllideans. In our study, no correlation was observed between the amount of phosphorus and the number of copepods in populations of zooplankton. Nevertheless, the trophic states of the three lakes seemed to affect the degree of infection in fish. In conclusion, at least in sub-alpine lakes, abiotic factors such as water temperature, oxygenation and trophic state seem to have an influence on maintaining or preventing perch infection with D. latum.

  13. Volatile and Within-Needle Terpene Changes to Douglas-fir Trees Associated With Douglas-fir Beetle (Coleoptera: Curculionidae) Attack.

    Science.gov (United States)

    Giunta, A D; Runyon, J B; Jenkins, M J; Teich, M

    2016-08-01

    Mass attack by tree-killing bark beetles (Curculionidae: Scolytinae) brings about large chemical changes in host trees that can have important ecological consequences. For example, mountain pine beetle (Dendroctonus ponderosae Hopkins) attack increases emission of terpenes by lodgepole pine (Pinus contorta Dougl. ex Loud.), affecting foliage flammability with consequences for wildfires. In this study, we measured chemical changes to Douglas-fir (Pseudotsuga menziesii var. glauca (Mirb.) Franco) foliage in response to attack by Douglas-fir beetles (Dendroctonus pseudotsugae Hopkins) as trees die and crowns transitioned from green/healthy, to green-infested (year of attack), to yellow (year after attack), and red (2 yr after attack). We found large differences in volatile and within-needle terpene concentrations among crown classes and variation across a growing season. In general, emissions and concentrations of total and individual terpenes were greater for yellow and red needles than green needles. Douglas-fir beetle attack increased emissions and concentrations of terpene compounds linked to increased tree flammability in other conifer species and compounds known to attract beetles (e.g., [Formula: see text]-pinene, camphene, and D-limonene). There was little relationship between air temperature or within-needle concentrations of terpenes and emission of terpenes, suggesting that passive emission of terpenes (e.g., from dead foliage) does not fully explain changes in volatile emissions. The potential physiological causes and ecological consequences of these bark beetle-associated chemical changes are discussed. © The Authors 2016. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

  14. Technical and structural reading on ode Alraieah of Omar ibn Abi Rabieah and its emotional characteristic

    Directory of Open Access Journals (Sweden)

    2015-09-01

    Full Text Available Abstract: This article examines the famous Rbheah ode of Omar ibn Abi With The aim of finding The Structural form and some nice features. Knowing that this ods is the most famous and longest ode of Omar and there is in it the most characteristic of his poetry in the storied format which includes elements of the short story with its modern sense and depicts a happy life of The Umayyad period particularly those aspects that relate to women. And from this perspective has become the registered office of the poet's life and Reflection for his inner emotions. The formation of discussion like the following: Discussion Started With the introduction of what it should be noted Based on the announce new version.Then Addressed in this fifth issues and termination: 1.the main Thoughts and ideas in the Ode and its position and the way in which the poet has written ode.2.The Storied Level and dialog in theOde.3.The music in the ode and role of its weighs.4.The imaging level of the Ode in reflection for the Hejaz life. 5. Structural level of the Ode and its emotional aspects. in the end, The Paper achieved some conclusions, such as: the most remarkable is that Ibn Rbia is Sensory and womanish school leader that could link the Old dialogue Soul to Our contemporary world with poeticlyrics and dialogue Fiction.He is first real poet that granted to lyric poem the numerous technical features such as storytelling and dialogue and simplifying weights to singing.and this ode became famous for High precision in the selection of words.

  15. Insights into Diterpene Cyclization from Structure of Bifunctional Abietadiene Synthase from Abies grandis

    Energy Technology Data Exchange (ETDEWEB)

    Zhou, Ke; Gao, Yang; Hoy, Julie A.; Mann, Francis M.; Honzatko, Richard B.; Peters, Reuben J. (Iowa State)

    2013-09-24

    Abietadiene synthase from Abies grandis (AgAS) is a model system for diterpene synthase activity, catalyzing class I (ionization-initiated) and class II (protonation-initiated) cyclization reactions. Reported here is the crystal structure of AgAS at 2.3 {angstrom} resolution and molecular dynamics simulations of that structure with and without active site ligands. AgAS has three domains ({alpha}, {beta}, and {gamma}). The class I active site is within the C-terminal {alpha} domain, and the class II active site is between the N-terminal {gamma} and {beta} domains. The domain organization resembles that of monofunctional diterpene synthases and is consistent with proposed evolutionary origins of terpene synthases. Molecular dynamics simulations were carried out to determine the effect of substrate binding on enzymatic structure. Although such studies of the class I active site do lead to an enclosed substrate-Mg{sup 2+} complex similar to that observed in crystal structures of related plant enzymes, it does not enforce a single substrate conformation consistent with the known product stereochemistry. Simulations of the class II active site were more informative, with observation of a well ordered external loop migration. This 'loop-in' conformation not only limits solvent access but also greatly increases the number of conformational states accessible to the substrate while destabilizing the nonproductive substrate conformation present in the 'loop-out' conformation. Moreover, these conformational changes at the class II active site drive the substrate toward the proposed transition state. Docked substrate complexes were further assessed with regard to the effects of site-directed mutations on class I and II activities.

  16. From pattern to process: species and functional diversity in fungal endophytes of Abies beshanzuensis.

    Science.gov (United States)

    Yuan, Zhi-Lin; Rao, Long-Bing; Chen, Yi-Cun; Zhang, Chu-Long; Wu, You-Gui

    2011-03-01

    The biodiversity-functional relationship in fungal ecology was recently developed and debated, but has rarely been addressed in endophytes. In this study, an integrative culture system was designed to capture a rich fungal consortium from the conifer Abies beshanzuensis. Results indicate an impressive diversity of fungal lineages (a total of 84 taxa classified in Dikarya) and a relatively high proportion of hitherto unknown species (27.4%). The laccase gene was used as a functional marker due to its involvement in lignocellulose degradation. Remarkable diversity of laccase genes was found across a wide range of taxa, with at least 35 and 19 distinct sequences in ascomycetes and basidiomycetes respectively, were revealed. Many groups displayed variable ability to decompose needles. Furthermore, many ascomycetes, including three volatile-producing Muscodor species (Xylariaceae), showed the ability to inhibit pathogens. Notably, most laccase-producing species showed little or no antibiosis and vice versa. Clavicipitalean and ustilaginomycetous fungi, specifically toxic to insects, were inferred from taxonomic information. Intra-specific physiological variation in Pezicula sporulosa, a second dominant species, was clearly high. We conclude that a suite of defensive characteristics in endophytes contributes to improving host fitness under various stresses and that a diversity of laccase genes confers an ecological advantage in competition for nutrients. Intra-specific diversity may be of great ecological significance for ecotypic adaptation. These findings suggest a fair degree of functional complementarity rather than redundancy among endemic symbionts of natural plant populations. Copyright © 2010 The British Mycological Society. Published by Elsevier Ltd. All rights reserved.

  17. Temporal variations of mobile carbohydrates in Abies fargesii at the upper tree limits.

    Science.gov (United States)

    Dang, H S; Zhang, K R; Zhang, Q F; Xu, Y M

    2015-01-01

    Low temperatures are associated high-altitude treelines, but the functional mechanism of treeline formation remains controversial. The relative contributions of carbon limitation (source activity) and growth limitation (sink activity) require more tests across taxa and regions. We examined temporal variations of mobile carbon supply in different tissues of Abies fargesii across treeline ecotones on north- and south-facing slopes of the Qinling Mountains, China. Non-structural carbohydrate (NSC) concentrations in tissues along the altitudinal gradient on both slopes changed significantly in the early and late growing season, but not in the mid-growing season, indicating the season-dependent carbon supply status. Late in the growing season on both slopes, trees at the upper limits had the highest NSC concentrations and total soluble sugars and lowest starch concentrations compared to trees at the lower elevations. NSC concentrations tended to increase in needles and branches throughout the growing season with increasing elevation on both slopes, but declined in roots and stems. NSC concentrations across sampling dates also indicated increases in needles and branches, and decreases in roots and stem with increasing elevation. Overall altitudinal trends of NSC in A. fargesii revealed no depletion of mobile carbon reserves at upper elevation limits, suggesting limitation of sink activity dominates tree life across treeline ecotones in both north- and south-facing slopes. Carbon reserves in storage tissues (especially roots) in the late growing season might also play an important role in winter survival and early growth in spring at upper elevations on both slopes, which define the uppermost limit of A. fargesii. © 2014 German Botanical Society and The Royal Botanical Society of the Netherlands.

  18. Fulvic acid affects proliferation and maturation phases in Abies cephalonica embryogenic cells.

    Science.gov (United States)

    Zancani, Marco; Bertolini, Alberto; Petrussa, Elisa; Krajňáková, Jana; Piccolo, Alessandro; Spaccini, Riccardo; Vianello, Angelo

    2011-07-15

    Embryogenic cell masses (ECM) of Abies cephalonica were grown on proliferation media in the presence and absence of fulvic acid (FA), whose molecular composition and conformational rigidity were evaluated by CPMAS-¹³C NMR spectroscopy. To assess the physiological effects of this humic material during proliferation and maturation stages of somatic embryogenesis (SE), proliferation rate, proportion of consecutive developmental stages of pro-embryogenic masses (PEM), cellular ATP and glucose-6-phosphate were evaluated at regular intervals. FA increased the proliferation rate, especially during the early sampling days, and the percentage of PEM in their advanced developmental stage. Cellular ATP and glucose-6-phospahte were increased by FA pre-treatment during the maturation phase. Furthermore, the effects of the anti-auxin p-chlorophenoxyisobutyric acid (PCIB), such as a decrease of growth and the enhancement of PEM III induction, were inverted by FA. Proton pumping ATPase and PPase activities were decreased in microsomes from PCIB-treated ECM, while they increased in the presence of FA. This fulvic matter also induced a delay in somatic embryo formation during the maturation phase. Both the improvement of the PEM proliferation and the reduction of the subsequent maturation process of A. cephalonica are explained by a release from the complex humic structure of low molecular-weight molecules, which may interact with the plant hormonal signaling pathway. These effects appear to be related to the hydrophilic and conformationally labile nature of FA. The structure-activity relationship observed here suggests that the influence of FA on ECM may be attributed to specific bioactive molecules that are preferentially released from the FA loose superstructure. Copyright © 2011 Elsevier GmbH. All rights reserved.

  19. Isoprene and terpenoid emissions from Abies alba: Identification and emission rates under ambient conditions

    Science.gov (United States)

    Pokorska, Olga; Dewulf, Jo; Amelynck, Crist; Schoon, Niels; Šimpraga, Maja; Steppe, Kathy; Van Langenhove, Herman

    2012-11-01

    In this study, biogenic volatile organic compound (BVOC) emissions from Abies alba were studied under ambient conditions in Flanders (Belgium). Emission patterns and rates were investigated from April till November 2010 by using the dynamic branch enclosure technique. The present work revealed that A. alba is an isoprene emitter, with isoprene accounting for 86-93% of total BVOC emissions, except during budburst (67%) in May. The emission spectrum of A. alba consisted of 27 compounds. Next to isoprene, the main emitted compounds were α-pinene, β-pinene, camphene and limonene. BVOC emissions showed a peak in June after development of the young needles, followed by a constant emission during summer months and September and a decrease in October. In all the samples isoprene was the most abundant compound with standardized emission rates between 27 μg g(dw)-1 h-1 in June and 4.6 μg g(dw)-1 h-1 in October, while the total standardized terpenoid emission rates ranged from 2.85 μg g(dw)-1 h-1 in June to 0.26 μg g(dw)-1 h-1 in October. The obtained average β coefficients according to the temperature dependent algorithm of Guenther et al. (1993) during April-June, July, August and September-October were as follows: for terpenoids 0.12 ± 0.03, 0.11 ± 0.05, 0.12 ± 0.04, 0.24 ± 0.01 K-1 and sesquiterpenes (SQTs) 0.09 ± 0.02, 0.11 ± 0.01, 0.10 ± 0.05, 0 K-1, respectively. Overall, isoprene detected in this study was never quantified in previous studies on A. alba and this finding could have a significant impact on the regional BVOCs budget. Therefore, the result of this study is very important for modeling and local air quality.

  20. Winter ecology of a subalpine grassland: Effects of snow removal on soil respiration, microbial structure and function.

    Science.gov (United States)

    Gavazov, Konstantin; Ingrisch, Johannes; Hasibeder, Roland; Mills, Robert T E; Buttler, Alexandre; Gleixner, Gerd; Pumpanen, Jukka; Bahn, Michael

    2017-07-15

    Seasonal snow cover provides essential insulation for mountain ecosystems, but expected changes in precipitation patterns and snow cover duration due to global warming can influence the activity of soil microbial communities. In turn, these changes have the potential to create new dynamics of soil organic matter cycling. To assess the effects of experimental snow removal and advanced spring conditions on soil carbon (C) and nitrogen (N) dynamics, and on the biomass and structure of soil microbial communities, we performed an in situ study in a subalpine grassland in the Austrian Alps, in conjunction with soil incubations under controlled conditions. We found substantial winter C-mineralisation and high accumulation of inorganic and organic N in the topsoil, peaking at snowmelt. Soil microbial biomass doubled under the snow, paralleled by a fivefold increase in its C:N ratio, but no apparent change in its bacteria-dominated community structure. Snow removal led to a series of mild freeze-thaw cycles, which had minor effects on in situ soil CO2 production and N mineralisation. Incubated soil under advanced spring conditions, however, revealed an impaired microbial metabolism shortly after snow removal, characterised by a limited capacity for C-mineralisation of both fresh plant-derived substrates and existing soil organic matter (SOM), leading to reduced priming effects. This effect was transient and the observed recovery in microbial respiration and SOM priming towards the end of the winter season indicated microbial resilience to short-lived freeze-thaw disturbance under field conditions. Bacteria showed a higher potential for uptake of plant-derived C substrates during this recovery phase. The observed temporary loss in microbial C-mineralisation capacity and the promotion of bacteria over fungi can likely impede winter SOM cycling in mountain grasslands under recurrent winter climate change events, with plausible implications for soil nutrient availability and