Salmon River Habitat Enhancement, Part 1, 1984 Annual Report.

Energy Technology Data Exchange (ETDEWEB)

Konopacky, Richard C.

1985-06-01

This volume contains reports on subprojects involving the determining of alternatives to enhance salmonid habitat on patented land in Bear Valley Creek, Idaho, coordination activities for habitat projects occurring on streams within fishing areas of the Shoshone-Bannock Indian Tribes, and habitat and fish inventories in the Salmon River. Separate abstracts have been prepared for individual reports. (ACR)

Development of habitat suitability criteria for Neotropical stream fishes and an assessment of their transferability to streams with different conservation status

Directory of Open Access Journals (Sweden)

Fabrício Barreto Teresa

Full Text Available We assessed the preference of 10 fish species for depth and velocity conditions in forested streams from southeastern Brazil using habitat suitability criteria (HSC curves. We also tested whether preference patterns observed in forested streams can be transferred to deforested streams. We used data from fish sampled in 62 five-meter sites in three forested streams to construct preference curves. Astyanax altiparanae, A. fasciatus, Knodus moenkhausii, and Piabina argentea showed a preference for deep slow habitats, whereas Aspidoras fuscoguttatus, Characidium zebra, Cetopsorhamdia iheringi, Pseudopimelodus pulcher, and Hypostomus nigromaculatus showed an opposite pattern: preference for shallow fast habitats. Hypostomus ancistroides showed a multimodal pattern of preference for depth and velocity. To evaluate whether patterns observed in forested streams may be transferred to deforested streams, we sampled 64 five-meters sites in three deforested streams using the same methodology. The preference for velocity was more consistent than for depth, as success in the transferability criterion was 86% and 29% of species, respectively. This indicates that velocity is a good predictor of species abundance in streams, regardless of their condition

Summary Report for Bureau of Fisheries Stream Habitat Surveys : Yakima River Basin, 1934-1942, Final Report.

Energy Technology Data Exchange (ETDEWEB)

McIntosh, Bruce A.; Clark, Sharon E.; Sedell, James R.

1996-01-01

. The Bureau of Fisheries survey is unique because it is the only long-term data set that quantifies fish habitat in a manner that is replicable over time; no other similar work is known to exist. Other surveys, such as Thompson and Haas (1960), inventoried extensive areas in a manner that was mostly qualitative, subjectively estimating physical characteristics like bank cover and stream shading. Spawning, rearing, and resting habitat were not systematically quantified to allow comparisons over time. Knowledge of the past and present quantity and quality of anadromous fish habitat in the Columbia River Basin is essential to any effort to enhance fish populations. Habitat condition is a key element in monitoring and evaluating progress towards the doubling goal. Integration of this information into the Columbia River Fish and Wildlife Plan can provide the baseline information to greatly enhance understanding of past, present, and future habitat conditions in the basin to provide for improved management decisions.

Morphological divergence and flow-induced phenotypic plasticity in a native fish from anthropogenically altered stream habitats.

Science.gov (United States)

Franssen, Nathan R; Stewart, Laura K; Schaefer, Jacob F

2013-11-01

Understanding population-level responses to human-induced changes to habitats can elucidate the evolutionary consequences of rapid habitat alteration. Reservoirs constructed on streams expose stream fishes to novel selective pressures in these habitats. Assessing the drivers of trait divergence facilitated by these habitats will help identify evolutionary and ecological consequences of reservoir habitats. We tested for morphological divergence in a stream fish that occupies both stream and reservoir habitats. To assess contributions of genetic-level differences and phenotypic plasticity induced by flow variation, we spawned and reared individuals from both habitats types in flow and no flow conditions. Body shape significantly and consistently diverged in reservoir habitats compared with streams; individuals from reservoirs were shallower bodied with smaller heads compared with individuals from streams. Significant population-level differences in morphology persisted in offspring but morphological variation compared with field-collected individuals was limited to the head region. Populations demonstrated dissimilar flow-induced phenotypic plasticity when reared under flow, but phenotypic plasticity in response to flow variation was an unlikely explanation for observed phenotypic divergence in the field. Our results, together with previous investigations, suggest the environmental conditions currently thought to drive morphological change in reservoirs (i.e., predation and flow regimes) may not be the sole drivers of phenotypic change.

Effects of natural-channel-design restoration on habitat quality in Catskill Mountain streams, New York

Science.gov (United States)

Ernst, Anne G.; Baldigo, Barry P.; Mulvihill, Christiane; Vian, Mark

2010-01-01

Stream restoration has received much attention in recent years, yet there has been little effort to evaluate its impacts on physical habitat, stability, and biota. A popular but controversial stream restoration approach is natural channel design (NCD), which cannot be adequately evaluated without a long-term, independent assessment of its effects on stream habitat. Six reaches of five Catskill Mountain streams in southeastern New York were restored during 2000–2003 following NCD techniques to decrease bed and bank degradation, decrease sediment loads, and improve water quality. Habitat surveys were conducted during summer low flows from 2001 to 2007. The effects of the NCD projects on stream condition were assessed via a before–after–control–impact study design to quantify the net changes in stream and bank habitat variables relative to those in unaltered control reaches. Analysis of variance tests of three different measures of bank stability show that on average stream stability increased at treatment sites for 2–5 years after restoration. Mean channel depth, thalweg depth, and the pool–riffle ratio generally increased, whereas mean channel width, percent streambank coverage by trees, and shade decreased. Habitat suitability indices for local salmonid species increased at four of six reaches after restoration. The changes in channel dimensions rendered them generally more characteristic of stabler stream forms in the given valley settings. Although these studies were done relatively soon after project completion, our findings demonstrate that habitat conditions can be improved in degraded Catskill Mountain streams through NCD restoration.

Daytime habitat selection for juvenile parr brown trout (Salmo trutta in small lowland streams

Directory of Open Access Journals (Sweden)

Conallin J.

2014-03-01

Full Text Available Physical habitat is important in determining the carrying capacity of juvenile brown trout, and within freshwater management. Summer daytime physical habitat selection for the parr lifestage (7–20 cm juvenile brown trout (Salmo trutta was assessed in 6 small lowland streams. Habitat preference was determined for the four variables; water velocity, water depth, substrate and cover, and the preferences for physical habitat selection were expressed in terms of habitat suitability indices (HSI’s. The statistical confidence of HSI’s was evaluated using power analysis. It was found that a minimum of 22 fish observations was needed to have statistical confidence in the HSIs for water depth, and a minimum of 92 fish observations for water velocity during daytime summer conditions. Generally parr were utilising the deeper habitats, indicating preference for deeper water. Cover was also being selected for at all sites, but selection was inconsistent among sites for the variables substrate and velocity. The results indicate that during daytime summer conditions water depth is a significant variable for parr habitat selection in these small lowland streams, with cover also being important. Therefore, daytime refugia may be a critical limiting factor for parr in small lowland streams, and important for stream management actions under the Water Framework Directive.

Individual variation in habitat use in two stream fish assemblages

OpenAIRE

Luisa Resende Manna; Carla Ferreira Rezende

2015-01-01

The habitat use is an individual choice that is influenced by physical conditions such as substrate type, food resources availability and adequate depth. However, habitat use is often measured only through interspecific variability because intraspecific variability is supposed to be low. Here, the differences in habitat use by two stream fish assemblages in two different environments (Brazilian rainforest and semiarid) were investigated at both interspecific and intraspecific levels. We perfo...

State-of-the-art techniques for inventory of Great Lakes aquatic habitats and resources

Science.gov (United States)

Edsall, Thomas A.; Brock, R.H.; Bukata, R.P.; Dawson, J.J.; Horvath, F.J.; Busch, W.-Dieter N.; Sly, Peter G.

1992-01-01

This section of the Classification and Inventory of Great Lakes Aquatic Habitat report was prepared as a series of individually authored contributions that describe, in various levels of detail, state-of-the-art techniques that can be used alone or in combination to inventory aquatic habitats and resources in the Laurentian Great Lakes system. No attempt was made to review and evaluate techniques that are used routinely in limnological and fisheries surveys and inventories because it was felt that users of this document would be familiar with them.

Influence of Disturbance on Habitats and Biological Communities in Lowland Streams

DEFF Research Database (Denmark)

Pedersen, Morten Lauge; Friberg, N.

2009-01-01

). The results indicate that disturbance cascades through the stream ecosystem, primarily meditated by changes in macrophyte communities that are essential providers of habitat in unshaded lowland streams in which other structural elements, as coarse inorganic substrates and woody debris, are scarce...

Evaluating stream trout habitat on large-scale aerial color photographs

Science.gov (United States)

Wallace J. Greentree; Robert C. Aldrich

1976-01-01

Large-scale aerial color photographs were used to evaluate trout habitat by studying stream and streambank conditions. Ninety-two percent of these conditions could be identified correctly on the color photographs. Color photographs taken 1 year apart showed that rehabilitation efforts resulted in stream vegetation changes. Water depth was correlated with film density:...

Developing user-friendly habitat suitability tools from regional stream fish survey data

Science.gov (United States)

Zorn, T.G.; Seelbach, P.; Wiley, M.J.

2011-01-01

We developed user-friendly fish habitat suitability tools (plots) for fishery managers in Michigan; these tools are based on driving habitat variables and fish population estimates for several hundred stream sites throughout the state. We generated contour plots to show patterns in fish biomass for over 60 common species (and for 120 species grouped at the family level) in relation to axes of catchment area and low-flow yield (90% exceedance flow divided by catchment area) and also in relation to axes of mean and weekly range of July temperatures. The plots showed distinct patterns in fish habitat suitability at each level of biological organization studied and were useful for quantitatively comparing river sites. We demonstrate how these plots can be used to support stream management, and we provide examples pertaining to resource assessment, trout stocking, angling regulations, chemical reclamation of marginal trout streams, indicator species, instream flow protection, and habitat restoration. These straightforward and effective tools are electronically available so that managers can easily access and incorporate them into decision protocols and presentations.

Explaining spatial variability in stream habitats using both natural and management-influenced landscape predictors

Science.gov (United States)

K.J. Anlauf; D.W. Jensen; K.M. Burnett; E.A. Steel; K. Christiansen; J.C. Firman; B.E. Feist; D.P. Larsen

2011-01-01

1. The distribution and composition of in-stream habitats are reflections of landscape scale geomorphic and climatic controls. Correspondingly, Pacific salmon (Oncorhynchus spp.) are largely adapted to and constrained by the quality and complexity of those in-stream habitat conditions. The degree to which lands have been fragmented and managed can...

Microbial community diversity and composition varies with habitat characteristics and biofilm function in macrophyte-rich streams

DEFF Research Database (Denmark)

Levi, Peter S.; Starnawski, Piotr; Poulsen, Britta

2017-01-01

Biofilms in streams play an integral role in ecosystem processes and function yet few studies have investigated the broad diversity of these complex prokaryotic and eukaryotic microbial communities. Physical habitat characteristics can affect the composition and abundance of microorganisms...... in these biofilms by creating microhabitats. Here we describe the prokaryotic and eukaryotic microbial diversity of biofilms in sand and macrophyte habitats (i.e. epipsammon and epiphyton, respectively) in five macrophyte-rich streams in Jutland, Denmark. The macrophyte species varied in growth morphology, C......:N stoichiometry, and preferred stream habitat, providing a range in environmental conditions for the epiphyton. Among all habitats and streams, the prokaryotic communities were dominated by common phyla, including Alphaproteobacteria, Bacteriodetes, and Gammaproteobacteria, while the eukaryotic communities were...

Urbanization effects on stream habitat characteristics in Boston, Massachusetts; Birmingham, Alabama; and Salt Lake City, Utah

Science.gov (United States)

Short, T.M.; Giddings, E.M.P.; Zappia, H.; Coles, J.F.

2005-01-01

Relations between stream habitat and urban land-use intensity were examined in 90 stream reaches located in or near the metropolitan areas of Salt Lake City, Utah (SLC); Birmingham, Alabama (BIR); and Boston, Massachusetts (BOS). Urban intensity was based on a multi-metric index (urban intensity index or UII) that included measures of land cover, socioeconomic organization, and urban infrastructure. Twenty-eight physical variables describing channel morphology, hydraulic properties, and streambed conditions were examined. None of the habitat variables was significantly correlated with urbanization intensity in all three study areas. Urbanization effects on stream habitat were less apparent for streams in SLC and BIR, owing to the strong influence of basin slope (SLC) and drought conditions (BIR) on local flow regimes. Streamflow in the BOS study area was not unduly influenced by similar conditions of climate and physiography, and habitat conditions in these streams were more responsive to urbanization. Urbanization in BOS contributed to higher discharge, channel deepening, and increased loading of fine-grained particles to stream channels. The modifying influence of basin slope and climate on hydrology of streams in SLC and BIR limited our ability to effectively compare habitat responses among different urban settings and identify common responses that might be of interest to restoration or water management programs. Successful application of land-use models such as the UII to compare urbanization effects on stream habitat in different environmental settings must account for inherent differences in natural and anthropogenic factors affecting stream hydrology and geomorphology. The challenge to future management of urban development is to further quantify these differences by building upon existing models, and ultimately develop a broader understanding of urbanization effects on aquatic ecosystems. ?? 2005 by the American Fisheries Society.

Headwater biodiversity among different levels of stream habitat hierarchy

DEFF Research Database (Denmark)

Göthe, Emma; Friberg, Nikolai; Kahlert, Maria

2014-01-01

of a- and b-diversity to y-diversity between two levels of stream habitat hierarchy (catchment and region level). The relationship between species community structure and local environmental factors was also assessed. Our results show that both a- and b-diversity made a significant contribution to y......-diversity. b-diversity remained relatively constant between the two levels of habitat hierarchy even though local environmental control of the biota decreased from the catchment to the region level. To capture most of headwater y-diversity, management should therefore target sites that are locally diverse......, but at the same time select sites so that b-diversity is maximized. As environmental control of the biota peaked at the catchment level, the conservation of headwater stream diversity is likely to be most effective when management targets environmental conditions across multiple local sites within relatively...

Combined effects of local habitat, anthropogenic stress, and dispersal on stream ecosystems: a mesocosm experiment.

Science.gov (United States)

Turunen, Jarno; Louhi, Pauliina; Mykrä, Heikki; Aroviita, Jukka; Putkonen, Emmi; Huusko, Ari; Muotka, Timo

2018-06-06

The effects of anthropogenic stressors on community structure and ecosystem functioning can be strongly influenced by local habitat structure and dispersal from source communities. Catchment land uses increase the input of fine sediments into stream channels, clogging the interstitial spaces of benthic habitats. Aquatic macrophytes enhance habitat heterogeneity and mediate important ecosystem functions, being thus a key component of habitat structure in many streams. Therefore, the recovery of macrophytes following in-stream habitat modification may be prerequisite for successful stream restoration. Restoration success is also affected by dispersal of organisms from the source community, with potentially strongest responses in relatively isolated headwater sites that receive limited amount of dispersing individuals. We used a factorial design in a set of stream mesocosms to study the independent and combined effects of an anthropogenic stressor (sand sedimentation), local habitat (macrophytes, i.e. moss transplants) and enhanced dispersal (two levels: high vs. low) on organic matter retention, algal accrual rate, leaf decomposition and macroinvertebrate community structure. Overall, all responses were simple additive effects with no interactions between treatments. Sand reduced algal accumulation, total invertebrate density and density of a few individual taxa. Mosses reduced algal accrual rate and algae-grazing invertebrates, but enhanced organic matter retention and detritus- and filter-feeders. Mosses also reduced macroinvertebrate diversity by increasing the dominance by a few taxa. Mosses also reduced leaf-mass loss, possibly because the organic matter retained by mosses provided an additional food source for leaf-shredding invertebrates and thus reduced shredder aggregation into leaf packs. The effect of mosses on macroinvertebrate communities and ecosystem functioning was distinct irrespective of the level of dispersal, suggesting strong environmental

Simple measures of channel habitat complexity predict transient hydraulic storage in streams

Science.gov (United States)

Stream thalweg depth profiles (along path of greatest channel depth) and woody debris tallies have recently become components of routine field procedures for quantifying physical habitat in national stream monitoring efforts. Mean residual depth, standard deviation of thalweg dep...

Large wood and in-stream habitat for juvenile coho salmon and larval lampreys in a Pacific Northwest stream

Science.gov (United States)

Gonzalez, Rosalinda; Dunham, Jason B.; Lightcap, Scott W.; McEnroe, Jeffery R.

2017-01-01

The influences of large wood on Pacific salmon are well-studied, but studies of nonsalmonid species such as lampreys are uncommon. To address this need, we evaluated the potential effects of large wood on larval lampreys (Pacific Lamprey, Entosphenus tridentatus; and potentially Western Brook Lamprey Lampetra richardsoni), as well as juvenile Coho Salmon Oncorhynchus kisutch, in a small coastal Oregon stream. Our objectives were to 1) identify in-stream habitat characteristics associated with the presence of larval lampreys and abundance of juvenile Coho Salmon; and 2) evaluate how these characteristics were associated with in-stream wood. To address habitat use, we quantified presence of larval lampreys in 92 pools and abundance of juvenile Coho Salmon in 44 pools during summer low flows. We focused on a study reach where large wood was introduced into the stream between 2008 and 2009. Results indicated that presence of larval lampreys was significantly associated with availability of fine sediment and deeper substrate. The abundance of juvenile Coho Salmon (fish/pool) was strongly associated with pool surface area and to a weaker extent with the proportion of cobble and boulder substrates in pools. Pools with wood, regardless of whether they were formed by wood, had significantly greater coverage of fine sediment, deeper substrate, and greater pool surface area. Taken together, these results suggest that in-stream wood can provide habitat associated with presence of larval lampreys and greater abundance of juvenile Coho Salmon.

Transferability of habitat suitability criteria for fishes in warmwater streams

Science.gov (United States)

Freeman, Mary C.; Bowen, Z.H.; Crance, J.H.

1997-01-01

We developed habitat suitability criteria and tested their transferability for nine fishes inhabiting unregulated Piedmont and Coastal Plain streams in Alabama. Cr iteria for optimal habitat were defined as ranges of depth, velocity, substrate type and cover type for which a species' suitability index (proportional abundance divided by proportional habitat availability, scaled from 0 to 1) equalled or exceeded 0.4. We evaluated the transferability of criteria between study sites by testing the null hypothesis that species occurrence in a sample was independent of whether or not the sample was taken in optimal habitat. We also tested criteria transference to a large, flow-regulated river sampled during low flow periods. Depth, velocity and most substrate criteria developed for the bronze darter Percina palmaris successfully transferred between unregulated streams and to the flow-regulated river samples. All criteria developed for a pair of closely related, allopatric darter species, Etheostoma chuckwachattee and E. jordani, transferred sucessfully when applied between species (in the unregulated sites) and to the regulated river samples. In contrast, criteria for the Alabama shiner Cyprinella callistia failed nearly all tests of transferability. Criteria for E. stigmaeum, P. nigrofasciata, an undescribed Percina species, and a pair of related, allopatric Cyprinella species transferred inconsistently. The species with good criteria transference had high suitability indices for shallow depths, fast current velocities and coarse substrates, characteristic of riffle species. We suggest that microhabitat criteria for riffle fishes are more likely to provide a transferable measure of habitat quality than criteria for fishes that, although restricted to fluvial habitats, commonly occupy a variety of pool and riffle habitats.

Stream network geomorphology mediates predicted vulnerability of anadromous fish habitat to hydrologic change in southeast Alaska.

Science.gov (United States)

Sloat, Matthew R; Reeves, Gordon H; Christiansen, Kelly R

2017-02-01

In rivers supporting Pacific salmon in southeast Alaska, USA, regional trends toward a warmer, wetter climate are predicted to increase mid- and late-21st-century mean annual flood size by 17% and 28%, respectively. Increased flood size could alter stream habitats used by Pacific salmon for reproduction, with negative consequences for the substantial economic, cultural, and ecosystem services these fish provide. We combined field measurements and model simulations to estimate the potential influence of future flood disturbance on geomorphic processes controlling the quality and extent of coho, chum, and pink salmon spawning habitat in over 800 southeast Alaska watersheds. Spawning habitat responses varied widely across watersheds and among salmon species. Little variation among watersheds in potential spawning habitat change was explained by predicted increases in mean annual flood size. Watershed response diversity was mediated primarily by topographic controls on stream channel confinement, reach-scale geomorphic associations with spawning habitat preferences, and complexity in the pace and mode of geomorphic channel responses to altered flood size. Potential spawning habitat loss was highest for coho salmon, which spawn over a wide range of geomorphic settings, including steeper, confined stream reaches that are more susceptible to streambed scour during high flows. We estimated that 9-10% and 13-16% of the spawning habitat for coho salmon could be lost by the 2040s and 2080s, respectively, with losses occurring primarily in confined, higher-gradient streams that provide only moderate-quality habitat. Estimated effects were lower for pink and chum salmon, which primarily spawn in unconfined floodplain streams. Our results illustrate the importance of accounting for valley and reach-scale geomorphic features in watershed assessments of climate vulnerability, especially in topographically complex regions. Failure to consider the geomorphic context of stream

Linking stream flow and groundwater to avian habitat in a desert riparian system.

Science.gov (United States)

Merritt, David M; Bateman, Heather L

2012-10-01

Increasing human populations have resulted in aggressive water development in arid regions. This development typically results in altered stream flow regimes, reduced annual flow volumes, changes in fluvial disturbance regimes, changes in groundwater levels, and subsequent shifts in ecological patterns and processes. Balancing human demands for water with environmental requirements to maintain functioning ecosystems requires quantitative linkages between water in streams and ecosystem attributes. Streams in the Sonoran Desert provide important habitat for vertebrate species, including resident and migratory birds. Habitat structure, food, and nest-building materials, which are concentrated in riparian areas, are provided directly or indirectly by vegetation. We measured riparian vegetation, groundwater and surface water, habitat structure, and bird occurrence along Cherry Creek, a perennial tributary of the Salt River in central Arizona, USA. The purpose of this work was to develop an integrated model of groundwater-vegetation-habitat structure and bird occurrence by: (1) characterizing structural and provisioning attributes of riparian vegetation through developing a bird habitat index (BHI), (2) validating the utility of our BHI through relating it to measured bird community composition, (3) determining the riparian plant species that best explain the variability in BHI, (4) developing predictive models that link important riparian species to fluvial disturbance and groundwater availability along an arid-land stream, and (5) simulating the effects of changes in flow regime and groundwater levels and determining their consequences for riparian bird communities. Riparian forest and shrubland vegetation cover types were correctly classified in 83% of observations as a function of fluvial disturbance and depth to water table. Groundwater decline and decreased magnitude of fluvial disturbance caused significant shifts in riparian cover types from riparian forest to

Development of habitat suitability criteria for Neotropical stream fishes and an assessment of their transferability to streams with different conservation status

Directory of Open Access Journals (Sweden)

Fabrício Barreto Teresa

Full Text Available We assessed the preference of 10 fish species for depth and velocity conditions in forested streams from southeastern Brazil using habitat suitability criteria (HSC curves. We also tested whether preference patterns observed in forested streams can be transferred to deforested streams. We used data from fish sampled in 62 five-meter sites in three forested streams to construct preference curves. Astyanax altiparanae, A. fasciatus, Knodus moenkhausii, and Piabina argentea showed a preference for deep slow habitats, whereas Aspidoras fuscoguttatus, Characidium zebra, Cetopsorhamdia iheringi, Pseudopimelodus pulcher, and Hypostomus nigromaculatus showed an opposite pattern: preference for shallow fast habitats. Hypostomus ancistroides showed a multimodal pattern of preference for depth and velocity. To evaluate whether patterns observed in forested streams may be transferred to deforested streams, we sampled 64 five-meters sites in three deforested streams using the same methodology. The preference for velocity was more consistent than for depth, as success in the transferability criterion was 86% and 29% of species, respectively. This indicates that velocity is a good predictor of species abundance in streams, regardless of their conditionNeste estudo avaliamos a preferência de 10 espécies de peixes por condições de profundidade e fluxo em riachos florestados do sudeste do Brasil por meio do critério de adequabilidade de habitat (habitat suitability criteria - curvas HSC. Testamos também se os padrões de preferência observados nos riachos florestados podem ser transferidos para riachos desmatados. Foram realizadas amostragens da ictiofauna em 62 trechos de cinco metros de extensão em três riachos florestados para a construção das curvas de preferência. Astyanax altiparanae, A. fasciatus, Knodus moenkhausii e Piabina argentea apresentaram preferência por habitats lentos e profundos, enquanto Aspidoras fuscoguttatus, Characidium zebra

Use of functional traits to assess changes in stream fish assemblages across a habitat gradient

Directory of Open Access Journals (Sweden)

Mariela Domiciano Ribeiro

Full Text Available Abstract Functional traits are important for understanding the links between species occurrence and environmental conditions. Identifying these links makes it possible to predict changes in species composition within communities under specific environmental conditions. We used functional traits related to habitat use and trophic ecology in order to assess the changes in fish community composition between streams with varying habitat structure. The relationship between the species traits and habitat characteristics was analyzed using an RLQ ordination analysis. Although species were widely distributed in habitats with different structures, physical conditions did favor some species based on their functional characteristics. Eight functional traits were found to be associated with stream habitat structure, allowing us to identify traits that may predict the susceptibility of fish species to physical habitat degradation.

Impact of groundwater abstraction on physical habitat of brown trout (Salmo trutta) in a small Danish stream

DEFF Research Database (Denmark)

Olsen, M.; Bøgh, E.; Pedersen, Stig

2009-01-01

The purpose of this study was to assess the impact of groundwater abstraction on stream discharge and physical habitat conditions for brown trout (Salmo trutta) in a small Danish stream. Stream discharge was simulated using a lumped hydrological model (NAM) and a scenario was set up for stream...... discharge reference conditions. Stream physical habitat conditions (WUA) were simulated for four life stages of trout using a hydraulic habitat model (RHYHABSIM). The impact of groundwater abstraction on WUA for trout was assessed by combined simulations from the NAM-model and the RHYHABSIM-model. The model...... predicted that groundwater abstraction reduced median annual discharge by 37 % and mean annual 90th percentile discharge by 82 %. Summer discharge was relatively most affected by groundwater abstraction (66 % reduction of median discharge) and WUA was therefore particularly affected by groundwater...

Summary Report for Bureau of Fisheries Stream Habitat Surveys : Clearwater, Salmon, Weiser, and Payette River Basins, 1934-1942, Final Report.

Energy Technology Data Exchange (ETDEWEB)

McIntosh, Bruce A.; Clark, Sharon E.; Sedell, James R.

1995-01-01

should be used to assess pool and substrate conditions. This data is available from the Bonneville Power Administration. The Bureau of Fisheries survey is unique because it is the only long-term data set that quantifies fish habitat in a manner that is replicable over time; no other similar work is known to exist. Other surveys, such as Thompson and Haas (1960), inventoried extensive areas in a manner that was mostly qualitative, subjectively estimating physical characteristics like bank cover and stream shading. Spawning, rearing, and resting habitat were not systematically quantified to allow comparisons over time. Knowledge of the past and present quantity and quality of anadromous fish habitat in the Columbia River Basin is essential to any effort to enhance fish populations. Habitat condition is a key element in monitoring and evaluating progress towards the doubling goal. Integration of this information into the Columbia River Fish and Wildlife Plan can provide the baseline information to greatly enhance understanding of past, present, and future habitat conditions in the basin to provide for improved management decisions.

Summary Report for Bureau of Fisheries Stream Habitat Surveys : Umatilla, Tucannon, Asotin, and Grande Ronde River Basins, 1934-1942, Final Report.

Energy Technology Data Exchange (ETDEWEB)

McIntosh, Bruce A.; Clark, Sharon E.; Sedell, James R.

1995-01-01

Bonneville Power Administration. The Bureau of Fisheries survey is unique because it is the only long-term data set that quantifies fish habitat in a manner that is replicable over time; no other similar work is known to exist. Other surveys, such as Thompson and Haas (1960) inventoried extensive areas in a manner that was mostly qualitative, subjectively estimating physical characteristics like bank cover and stream shading. Spawning, rearing, and resting habitat were not systematically quantified to allow comparisons over time. Knowledge of the past and present quantity and quality of anadromous fish habitat in the Columbia River Basin is essential to any effort to enhance fish populations. Habitat condition is a key element in monitoring and evaluating progress towards the doubling goal. Integration of this information into the Columbia River Fish and Wildlife Plan can provide the baseline information to greatly enhance understanding of past, present, and future habitat conditions in the basin to provide for improved management decisions.

Baseline Channel Geometry and Aquatic Habitat Data for Selected Streams in the Matanuska-Susitna Valley, Alaska

Science.gov (United States)

Curran, Janet H.; Rice, William J.

2009-01-01

Small streams in the rapidly developing Matanuska-Susitna Valley in south-central Alaska are known to support anadromous and resident fish but little is known about their hydrologic and riparian conditions, or their sensitivity to the rapid development of the area or climate variability. To help address this need, channel geometry and aquatic habitat data were collected in 2005 as a baseline of stream conditions for selected streams. Three streams were selected as representative of various stream types, and one drainage network, the Big Lake drainage basin, was selected for a systematic assessment. Streams in the Big Lake basin were drawn in a Geographic Information System (GIS), and 55 reaches along 16 miles of Meadow Creek and its primary tributary Little Meadow Creek were identified from orthoimagery and field observations on the basis of distinctive physical and habitat parameters, most commonly gradient, substrate, and vegetation. Data-collection methods for sites at the three representative reaches and the 55 systematically studied reaches consisted of a field survey of channel and flood-plain geometry and collection of 14 habitat attributes using published protocols or slight modifications. Width/depth and entrenchment ratios along the Meadow-Little Meadow Creek corridor were large and highly variable upstream of Parks Highway and lower and more consistent downstream of Parks Highway. Channel width was strongly correlated with distance, increasing downstream in a log-linear relation. Runs formed the most common habitat type, and instream vegetation dominated the habitat cover types, which collectively covered 53 percent of the channel. Gravel suitable for spawning covered isolated areas along Meadow Creek and about 29 percent of Little Meadow Creek. Broad wetlands were common along both streams. For a comprehensive assessment of small streams in the Mat-Su Valley, critical additional data needs include hydrologic, geologic and geomorphic, and biologic data

Restoring stream habitat connectivity: a proposed method for prioritizing the removal of resident fish passage barriers.

Science.gov (United States)

O'Hanley, Jesse R; Wright, Jed; Diebel, Matthew; Fedora, Mark A; Soucy, Charles L

2013-08-15

Systematic methods for prioritizing the repair and removal of fish passage barriers, while growing of late, have hitherto focused almost exclusively on meeting the needs of migratory fish species (e.g., anadromous salmonids). An important but as of yet unaddressed issue is the development of new modeling approaches which are applicable to resident fish species habitat restoration programs. In this paper, we develop a budget constrained optimization model for deciding which barriers to repair or remove in order to maximize habitat availability for stream resident fish. Habitat availability at the local stream reach is determined based on the recently proposed C metric, which accounts for the amount, quality, distance and level of connectivity to different stream habitat types. We assess the computational performance of our model using geospatial barrier and stream data collected from the Pine-Popple Watershed, located in northeast Wisconsin (USA). The optimization model is found to be an efficient and practical decision support tool. Optimal solutions, which are useful in informing basin-wide restoration planning efforts, can be generated on average in only a few minutes. Copyright © 2013 Elsevier Ltd. All rights reserved.

Disentangling the influences of habitat structure and limnological predictors on stream fish communities of a coastal basin, southeastern Brazil

Directory of Open Access Journals (Sweden)

Fabio Cop Ferreira

Full Text Available In stream environments habitat structure and limnological factors interact regulating patterns of energy and material transfer and affecting fish communities. In the coastal basins of Southeastern Brazil, limnological and structural characteristics differ between clear and blackwaters streams. The former have a diversity of substrate types, higher water velocities, and lower water conductivity, while the latter have sandy substrate, tea-colored and acidic waters, and low water velocities. In this study, we verified the relative importance of habitat structure and limnological variables in predicting patterns of variation in stream fish communities. Eight first to third order streams were sampled in the coastal plain of Itanhaém River basin. We captured 34 fish species and verified that community structure was influenced by physical habitat and limnology, being the former more important. A fraction of the variation could not be totally decomposed, and it was assigned to the joint influence of limnology and habitat structure. Some species that were restricted to blackwater streams, may have physiological and behavioral adaptations to deal with the lower pH levels. When we examined only the clearwater streams, all the explained variation in fish community composition was assigned to structural factors, which express specific preferences for different types of habitats.

Near-Term Effects of Repeated-Thinning with Riparian Buffers on Headwater Stream Vertebrates and Habitats in Oregon, USA

Directory of Open Access Journals (Sweden)

Deanna H. Olson

2014-11-01

Full Text Available We examined the effects of a second-thinning harvest with alternative riparian buffer management approaches on headwater stream habitats and associated vertebrates in western Oregon, USA. Our analyses showed that stream reaches were generally distinguished primarily by average width and depth, along with the percentage of the dry reach length, and secondarily, by the volume of down wood. In the first year post-harvest, we observed no effects of buffer treatment on stream habitat attributes after moderate levels of thinning. One of two “thin-through” riparian treatments showed stronger trends for enlarged stream channels, likely due to harvest disturbances. The effects of buffer treatments on salamanders varied among species and with habitat structure. Densities of Plethodon dunni and Rhyacotriton species increased post-harvest in the moderate-density thinning with no-entry buffers in wider streams with more pools and narrower streams with more down wood, respectively. However, Rhyacotriton densities decreased along streams with the narrowest buffer, 6 m, and P. dunni and Dicamptodon tenebrosus densities decreased in thin-through buffers. Our study supports the use of a 15-m or wider buffer to retain sensitive headwater stream amphibians.

Contrast of degraded and restored stream habitat using an individual-based salmon model

Science.gov (United States)

S. F. Railsback; M. Gard; Bret Harvey; Jason White; J.K.H. Zimmerman

2013-01-01

Stream habitat restoration projects are popular, but can be expensive and difficult to evaluate. We describe inSALMO, an individual-based model designed to predict habitat effects on freshwater life stages (spawning through juvenile out-migration) of salmon. We applied inSALMO to Clear Creek, California, simulating the production of total and large (>5 cm FL)...

Summary Report for Bureau of Fisheries Stream Habitat Surveys: Cowlitz River Basin, 1934-1942 Final Report.

Energy Technology Data Exchange (ETDEWEB)

McIntosh, Bruce A.; Clark, Sharon E.; Sedell, James R.

1995-01-01

This document contains summary reports of stream habitat surveys, conducted in the Cowlitz River basin, by the Bureau of Fisheries (BOF, now National Marine Fisheries Service) from 1938-1942. These surveys were part of a larger project to survey streams in the Columbia River basin that provided, or had provided, spawning and rearing habitat for salmon and steelhead. The purpose of the survey was, as described by Rich, [open quotes]to determine the present condition of the various tributaries with respect to their availability and usefulness for the migration, breeding, and rearing of migratory fishes[close quotes]. Current estimates of the loss of anadromous fish habitat in the Columbia River Basin are based on a series of reports published from 1949-1952 by the U.S. Fish and Wildlife Service. The reports were brief, qualitative accounts of over 5000 miles of stream surveys conducted by the BOF from 1934-1946. Despite their brevity, these BOF reports have formed the basis for estimating fish habitat losses and conditions in the Columbia River Basin.

The effects of road crossings on prairie stream habitat and function

Science.gov (United States)

Bouska, Wesley W.; Keane, Timothy; Paukert, Craig P.

2010-01-01

Improperly designed stream crossing structures may alter the form and function of stream ecosystems and habitat and prohibit the movement of aquatic organisms. Stream sections adjoining five concrete box culverts, five low-water crossings (concrete slabs vented by one or multiple culverts), and two large, single corrugated culvert vehicle crossings in eastern Kansas streams were compared to reference reaches using a geomorphologic survey and stream classification. Stream reaches were also compared upstream and downstream of crossings, and crossing measurements were used to determine which crossing design best mimicked the natural dimensions of the adjoining stream. Four of five low-water crossings, three of five box culverts, and one of two large, single corrugated pipe culverts changed classification from upstream to downstream of the crossings. Mean riffle spacing upstream at low-water crossings (8.6 bankfull widths) was double that of downstream reaches (mean 4.4 bankfull widths) but was similar upstream and downstream of box and corrugated pipe culverts. There also appeared to be greater deposition of fine sediments directly upstream of these designs. Box and corrugated culverts were more similar to natural streams than low-water crossings at transporting water, sediments, and debris during bankfull flows.

The role of beaver in shaping steelhead trout (Oncorhynchus mykiss) habitat complexity and thermal refugia in a central Oregon stream

Science.gov (United States)

Consolati, F.; Wheaton, J. M.; Neilson, B. T.; Bouwes, N.; Pollock, M. M.

2012-12-01

The incised and degraded habitat of Bridge Creek, tributary to the John Day River in central Oregon, is thought to be limiting the local population of ESA-listed steelhead trout (Oncorhynchus mykiss). Restoration efforts for this watershed are aimed to improve their habitat through reconnecting the channel with portions of its former floodplain (now terraces) to increase stream habitat complexity and the extent of riparian vegetation. This is being done via the installation of over a hundred beaver dam support (BDS) structures that are designed to either mimic beaver dams or support existing beaver dams. The overall objective of this study is to determine if the BDS structures have had an effect on stream channel habitat complexity and thermal refugia in selected sections of Bridge Creek. Analysis of stream temperature data in restoration treatment and control areas will show the effects of beaver dams on stream temperature. Analysis of aerial imagery and high resolution topographic data will exhibit how the number and types of geomorphic units have changed after the construction of beaver dams. Combined, the results of this research are aimed to increase our understanding of how beaver dams impact fish habitat and stream temperature.

Determination of the effects of fine-grained sediment and other limiting variables on trout habitat for selected streams in Wisconsin

Science.gov (United States)

Scudder, Barbara C.; Selbig, J.W.; Waschbusch, R.J.

2000-01-01

Two Habitat Suitability Index (HSI) models, developed by the U.S. Fish and Wildlife Service, were used to evaluate the effects of fine-grained (less than 2 millimeters) sediment on brook trout (Salvelinusfontinalis, Mitchill) and brown trout (Salmo trutta, Linnaeus) in 11 streams in west-central and southwestern Wisconsin. Our results indicated that fine-grained sediment limited brook trout habitat in 8 of 11 streams and brown trout habitat in only one stream. Lack of winter and escape cover for fry was the primary limiting variable for brown trout at 61 percent of the sites, and this factor also limited brook trout at several stations. Pool area or quality, in stream cover, streambank vegetation for erosion control, minimum flow, thalweg depth maximum, water temperature, spawning substrate, riffle dominant substrate, and dissolved oxygen also were limiting to trout in the study streams. Brook trout appeared to be more sensitive to the effects of fine-grained sediment than brown trout. The models for brook trout and brown trout appeared to be useful and objective screening tools for identifying variables limiting trout habitat in these streams. The models predicted that reduction in the amount of fine-grained sediment would improve brook trout habitat. These models may be valuable for establishing instream sediment-reduction goals; however, the decrease in sediment delivery needed to meet these goals cannot be estimated without quantitative data on land use practices and their effects on sediment delivery and retention by streams.

Development and assessment of indices to determine stream fish vulnerability to climate change and habitat alteration

Science.gov (United States)

Sievert, Nicholas A.; Paukert, Craig P.; Tsang, Yin-Phan; Infante, Dana M.

2016-01-01

Understanding the future impacts of climate and land use change are critical for long-term biodiversity conservation. We developed and compared two indices to assess the vulnerability of stream fish in Missouri, USA based on species environmental tolerances, rarity, range size, dispersal ability and on the average connectivity of the streams occupied by each species. These two indices differed in how environmental tolerance was classified (i.e., vulnerability to habitat alteration, changes in stream temperature, and changes to flow regimes). Environmental tolerance was classified based on measured species responses to habitat alteration, and extremes in stream temperatures and flow conditions for one index, while environmental tolerance for the second index was based on species’ traits. The indices were compared to determine if vulnerability scores differed by index or state listing status. We also evaluated the spatial distribution of species classified as vulnerable to habitat alteration, changes in stream temperature, and change in flow regimes. Vulnerability scores were calculated for all 133 species with the trait association index, while only 101 species were evaluated using the species response index, because 32 species lacked data to analyze for a response. Scores from the trait association index were greater than the species response index. This is likely due to the species response index's inability to evaluate many rare species, which generally had high vulnerability scores for the trait association index. The indices were consistent in classifying vulnerability to habitat alteration, but varied in their classification of vulnerability due to increases in stream temperature and alterations to flow regimes, likely because extremes in current climate may not fully capture future conditions and their influence on stream fish communities. Both indices showed higher mean vulnerability scores for listed species than unlisted species, which provided a coarse

Comparison of fish assemblages in two littoral habitats in a Neotropical morichal stream in Venezuela

Directory of Open Access Journals (Sweden)

Carmen G. Montaña

Full Text Available Morichales are lowland streams in South American savannas with riparian forest dominated by the moriche palm (Mauritia flexuosa. We sampled littoral habitats from ten flooded vegetated patches (dominated by Mauritiella aculeate and six sand banks in two months of the dry season (Feb-Mar 2005 in a stream in the savannas of Apure State, Venezuela. We collected samples that compromised 12,407 individual fishes of 107 species. Small-bodied fishes (< 100 mm, representing diverse trophic and life history strategies, were abundant. The most abundant species were in the families Characidae and Cichlidae. Fish assemblages from flooded vegetated patches differed significantly from those on adjacent sand banks. High structural complexity along vegetated shoreline habitats of morichal streams likely contributes to species richness and affects assemblage composition.

The energetic consequences of habitat structure for forest stream salmonids.

Science.gov (United States)

Naman, Sean M; Rosenfeld, Jordan S; Kiffney, Peter M; Richardson, John S

2018-05-08

1.Increasing habitat availability (i.e. habitat suitable for occupancy) is often assumed to elevate the abundance or production of mobile consumers; however, this relationship is often nonlinear (threshold or unimodal). Identifying the mechanisms underlying these nonlinearities is essential for predicting the ecological impacts of habitat change, yet the functional forms and ultimate causation of consumer-habitat relationships are often poorly understood. 2.Nonlinear effects of habitat on animal abundance may manifest through physical constraints on foraging that restrict consumers from accessing their resources. Subsequent spatial incongruence between consumers and resources should lead to unimodal or saturating effects of habitat availability on consumer production if increasing the area of habitat suitable for consumer occupancy comes at the expense of habitats that generate resources. However, the shape of this relationship could be sensitive to cross-ecosystem prey subsidies, which may be unrelated to recipient habitat structure and result in more linear habitat effects on consumer production. 3.We investigated habitat-productivity relationships for juveniles of stream-rearing Pacific salmon and trout (Oncorhynchus spp.), which typically forage in low-velocity pool habitats, while their prey (drifting benthic invertebrates) are produced upstream in high-velocity riffles. However, juvenile salmonids also consume subsidies of terrestrial invertebrates that may be independent of pool-riffle structure. 4.We measured salmonid biomass production in 13 experimental enclosures each containing a downstream pool and upstream riffle, spanning a gradient of relative pool area (14-80% pool). Increasing pool relative to riffle habitat area decreased prey abundance, leading to a nonlinear saturating effect on fish production. We then used bioenergetics model simulations to examine how the relationship between pool area and salmonid biomass is affected by varying levels of

Predator avoidance during reproduction: diel movements by spawning sockeye salmon between stream and lake habitats.

Science.gov (United States)

Bentley, Kale T; Schindler, Daniel E; Cline, Timothy J; Armstrong, Jonathan B; Macias, Daniel; Ciepiela, Lindsy R; Hilborn, Ray

2014-11-01

Daily movements of mobile organisms between habitats in response to changing trade-offs between predation risk and foraging gains are well established; however, less in known about whether similar tactics are used during reproduction, a time period when many organisms are particularly vulnerable to predators. We investigated the reproductive behaviour of adult sockeye salmon (Oncorhynchus nerka) and the activity of their principal predator, brown bears (Ursus arctos), on streams in south-western Alaska. Specifically, we continuously monitored movements of salmon between lake habitat, where salmon are invulnerable to bears, and three small streams, where salmon spawn and are highly vulnerable to bears. We conducted our study across 2 years that offered a distinct contrast in bear activity and predation rates. Diel movements by adult sockeye salmon between stream and lake habitat were observed in 51.3% ± 17.7% (mean ± SD) of individuals among years and sites. Fish that moved tended to hold in the lake for most of the day and then migrated into spawning streams during the night, coincident with when bear activity on streams tended to be lowest. Additionally, cyclic movements between lakes and spawning streams were concentrated earlier in the spawning season. Individuals that exhibited diel movements had longer average reproductive life spans than those who made only one directed movement into a stream. However, the relative effect was dependent on the timing of bear predation, which varied between years. When predation pressure primarily occurred early in the spawning run (i.e., during the height of the diel movements), movers lived 120-310% longer than non-movers. If predation pressure was concentrated later in the spawning run (i.e. when most movements had ceased), movers only lived 10-60% longer. Our results suggest a dynamic trade-off in reproductive strategies of sockeye salmon; adults must be in the stream to reproduce, but must also avoid predation long

Re-Meandering of Lowland Streams

DEFF Research Database (Denmark)

Pedersen, Morten Lauge; Kristensen, Klaus Kevin; Friberg, Nikolai

2014-01-01

We evaluated the restoration of physical habitats and its influence on macroinvertebrate community structure in 18 Danish lowland streams comprising six restored streams, six streams with little physical alteration and six channelized streams. We hypothesized that physical habitats...... and macroinvertebrate communities of restored streams would resemble those of natural streams, while those of the channelized streams would differ from both restored and near-natural streams. Physical habitats were surveyed for substrate composition, depth, width and current velocity. Macroinvertebrates were sampled...... along 100 m reaches in each stream, in edge habitats and in riffle/run habitats located in the center of the stream. Restoration significantly altered the physical conditions and affected the interactions between stream habitat heterogeneity and macroinvertebrate diversity. The substrate in the restored...

Summary report for Bureau of Fisheries stream habitat surveys: Cowlitz River basin. Final report 1934--1942

International Nuclear Information System (INIS)

McIntosh, B.A.; Clark, S.E.; Sedell, J.R.

1995-07-01

This document contains summary reports of stream habitat surveys, conducted in the Cowlitz River basin, by the Bureau of Fisheries (BOF, now National Marine Fisheries Service) from 1938--1942. These surveys were part of a larger project to survey streams in the Columbia River basin that provided, or had provided, spawning and rearing habitat for salmon and steelhead. The purpose of the survey was to determine the present condition of the various tributaries with respect to their availability and usefulness for the migration, breeding, and rearing of migratory fishes. Current estimates of the loss of anadromous fish habitat in the Columbia River Basin are based on a series of reports published from 1949--1952 by the US Fish and Wildlife Service

Daytime habitat selection for juvenile parr brown trout (Salmo trutta) in small lowland streams

DEFF Research Database (Denmark)

Conallin, J.; Boegh, E.; Olsen, M.

2014-01-01

Physical habitat is important in determining the carrying capacity of juvenile brown trout, and within freshwater management. Summer daytime physical habitat selection for the parr lifestage (7-20 cm) juvenile brown trout (Salmo trutta) was assessed in 6 small lowland streams. Habitat preference...... was determined for the four variables; water velocity, water depth, substrate and cover, and the preferences for physical habitat selection were expressed in terms of habitat suitability indices (HSI's). The statistical confidence of HSI's was evaluated using power analysis. It was found that a minimum of 22...... fish observations was needed to have statistical confidence in the HSIs for water depth, and a minimum of 92 fish observations for water velocity during daytime summer conditions. Generally parr were utilising the deeper habitats, indicating preference for deeper water. Cover was also being selected...

Variable responses of fish assemblages, habitat, and stability to natural-channel-design restoration in Catskill Mountain streams

Science.gov (United States)

Baldigo, Barry P.; Ernst, Anne G.; Warren, Dana R.; Miller, Sarah J.

2010-01-01

Natural-channel-design (NCD) restorations were recently implemented within large segments of five first- and second-order streams in the Catskill Mountains of New York in an attempt to increase channel stability, reduce bed and bank erosion, and sustain water quality. In conjunction with these efforts, 54 fish and habitat surveys were done from 1999 to 2007 at six restored reaches and five stable control reaches to evaluate the effects of NCD restoration on fish assemblages, habitat, and bank stability. A before–after–control–impact study design and two-factor analysis of variance were used to quantify the net changes in habitat and fish population and community indices at treatment reaches relative to those at unaltered control reaches. The density and biomass of fish communities were often dominated by one or two small prey species and no or few predator species before restoration and by one or more trout (Salmonidae) species after restoration. Significant increases in community richness (30%), diversity (40%), species or biomass equitability (32%), and total biomass (up to 52%) in at least four of the six restored reaches demonstrate that NCD restorations can improve the health and sustainability of fish communities in geomorphically unstable Catskill Mountain streams over the short to marginally long term. Bank stability, stream habitat, and trout habitat suitability indices (HSIs) generally improved significantly at the restored reaches, but key habitat features and trout HSIs did not change or decreased at two of them. Fish communities and trout populations at these two reaches were not positively affected by NCD restorations. Though NCD restorations often had a positive effect on habitat and fish communities, our results show that the initial habitat conditions limit the relative improvements than can be achieved, habitat quality and stability do not necessarily respond in unison, and biotic and abiotic responses cannot always be generalized.

Effects of coal mining, forestry, and road construction on southern Appalachian stream invertebrates and habitats.

Science.gov (United States)

Gangloff, Michael M; Perkins, Michael; Blum, Peter W; Walker, Craig

2015-03-01

Coal has been extracted via surface and sub-surface mining for decades throughout the Appalachian Mountains. New interest in ridge-top mining has raised concerns about possible waterway impacts. We examined effects of forestry, mining, and road construction-based disturbance on physico-chemistry and macroinvertebrate communities in east-central Tennessee headwater streams. Although 11 of 30 sites failed Tennessee's biocriteria scoring system, invertebrate richness was moderately high and we did not find significant differences in any water chemistry or habitat parameters between sites with passing and failing scores. However, conductivity and dissolved solid concentrations appeared elevated in the majority of study streams. Principal components (PCs) analysis indicated that six PCs accounted for ~77 % of among-site habitat variability. One PC associated with dissolved oxygen and specific conductance explained the second highest proportion of among-site variability after catchment area. Specific conductance was not correlated with catchment area but was strongly correlated with mining activity. Composition and success of multivariate models using habitat PCs to predict macroinvertebrate metrics was highly variable. PC scores associated with water chemistry and substrate composition were most frequently included in significant models. These results suggest that impacts of historical and current coal mining remain a source of water quality and macroinvertebrate community impairment in this region, but effects are subtle. Our results suggest that surface mining may have chronic and system-wide effects on habitat conditions and invertebrate communities in Cumberland Plateau streams.

Habitat-specific biomass, survival and growth of rainbow trout (Oncorhynchus mykiss) during summer in a small coastal stream

Science.gov (United States)

Bret C. Harvey; Jason L. White; Rodney J. Nakamoto

2005-01-01

We observed significant habitat-scale variation in the density, survival, and growth of 811 passive integrated transponder tagged rainbow trout (Oncorhynchus mykiss) enclosed for 63—68 days at natural density in 59 individual habitats (pools and riffles) in a small coastal California stream in summer 2001. The initial habitat-scale...

Stream habitat or water quality - what influences stronger fish and macrozoobenthos biodiversity?

Czech Academy of Sciences Publication Activity Database

Adámek, Z.; Jurajda, Pavel

2001-01-01

Roč. 1, č. 3 (2001), s. 305-311 ISSN 1642-3593. [Ecohydrology as a tool for restoration of physically degraded fish habitats. Warsaw, 11.06.2001-13.06.2001] Institutional research plan: CEZ:AV0Z6093917 Keywords : stream ecology * water quality * fish communities Subject RIV: EH - Ecology, Behaviour

2011 Los Alamos National Laboratory Riparian Inventory Results

Energy Technology Data Exchange (ETDEWEB)

Norris, Elizabeth J. [Los Alamos National Laboratory; Hansen, Leslie A. [Los Alamos National Laboratory; Hathcock, Charles D. [Los Alamos National Laboratory; Keller, David C. [Los Alamos National Laboratory; Zemlick, Catherine M. [Los Alamos National Laboratory

2012-03-29

A total length of 36.7 kilometers of riparian habitat were inventoried within LANL boundaries between 2007 and 2011. The following canyons and lengths of riparian habitat were surveyed and inventoried between 2007 and 2011. Water Canyon (9,669 m), Los Alamos Canyon (7,131 m), Pajarito Canyon (6,009 m), Mortandad Canyon (3,110 m), Two-Mile Canyon (2,680 m), Sandia Canyon (2,181 m), Three-Mile Canyon (1,883 m), Canyon de Valle (1,835 m), Ancho Canyon (1,143 m), Canada del Buey (700 m), Sandia Canyon (221 m), DP Canyon (159 m) and Chaquehui Canyon (50 m). Effluent Canyon, Fence Canyon and Potrillo Canyon were surveyed but no areas of riparian habitat were found. Stretches of inventoried riparian habitat were classified for prioritization of treatment, if any was recommended. High priority sites included stretches of Mortandad Canyon, LA Canyon, Pajarito Canyon, Two-Mile Canyon, Sandia Canyon and Water Canyon. Recommended treatment for high priority sites includes placement of objects into the stream channel to encourage sediment deposition, elimination of channel incision, and to expand and slow water flow across the floodplain. Additional stretches were classified as lower priority, and, for other sites it was recommended that feral cattle and exotic plants be removed to aid in riparian habitat recovery. In June 2011 the Las Conchas Wildfire burned over 150,000 acres of land in the Jemez Mountains and surrounding areas. The watersheds above LA Canyon, Water Canyon and Pajarito Canyon were burned in the Las Conchas Wildfire and flooding and habitat alteration were observed in these canyon bottoms (Wright 2011). Post fire status of lower priority areas may change to higher priority for some of the sites surveyed prior to the Las Conchas Wildfire, due to changes in vegetation cover in the adjacent upland watershed.

Warm season chloride concentrations in stream habitats of freshwater mussel species at risk

International Nuclear Information System (INIS)

Todd, Aaron K.; Kaltenecker, M. Georgina

2012-01-01

Warm season (May–October) chloride concentrations were assessed in stream habitats of freshwater mussel species at risk in southern Ontario, Canada. Significant increases in concentrations were observed at 96% of 24 long-term (1975–2009) monitoring sites. Concentrations were described as a function of road density indicating an anthropogenic source of chloride. Linear regression showed that 36% of the variation of concentrations was explained by road salt use by the provincial transportation ministry. Results suggest that long-term road salt use and retention is contributing to a gradual increase in baseline chloride concentrations in at risk mussel habitats. Exposure of sensitive mussel larvae (glochidia) to increasing chloride concentrations may affect recruitment to at risk mussel populations. - Highlights: ► Warm season chloride concentrations were assessed in habitats of mussel species at risk. ► Concentrations increased significantly at 96% of 24 long-term monitoring sites. ► Concentrations increased with increases in road density and road salt use. ► Retention of road salt likely contributed to elevated warm season concentrations. ► Glochidia exposure to increasing concentrations may affect mussel reproduction. - Warm season chloride concentrations increased in southern Ontario streams with road salt use, such that reproduction of freshwater mussel species at risk may be affected.

Umatilla River Basin Anadromous Fish Habitat Enhancement Project : 2001 Annual Report.

Energy Technology Data Exchange (ETDEWEB)

Shaw, R. Todd; Sexton, Amy D.

2003-02-01

development of a 105-foot well for off-stream livestock watering at approximately River Mile 12.0 Wildhorse Creek and construction of an engineered stream ford at approximately River Mile 3.0 Mission Creek. A total of $277,848 in financial cost share assistance was provided by the Confederated Tribes of the Umatilla Indian Reservation, U.S. Bureau of Indian Affairs, U.S. Environmental Protection Agency, U.S. Department of Agriculture, National Oceanic and Atmospheric Administration, U.S. Workforce Investment Act, Oregon Watershed Enhancement Board, Umatilla County and Pheasants Forever for planning efforts and habitat enhancements. Monitoring continued to quantify baseline conditions and the effects of habitat enhancements in the upper basin. Daily stream temperatures were collected from June through September at 22 sites. Suspended sediment samples were obtained at three gage stations to arrive at daily sediment load estimates. Photographs were taken at 96 existing and three newly established photo points to document habitat recovery and pre-project conditions. Transects were measured at three stream channel cross sections to assist with engineering and design and to obtain baseline data regarding channel morphology. Biological inventories were conducted at River Mile 3.0 Mission Creek to determine pre-project fish utilization above and below the passage barrier. Post-project inventories were also conducted at River Mile 85.0 of the Umatilla River at a project site completed in 1999. Umatilla Subbasin Watershed Assessment efforts were continued under a subcontract with Eco-Pacific. This watershed assessment document and working databases will be completed in fiscal year 2002 and made available to assist project personnel with sub-watershed prioritization of habitat needs. Water Works Consulting, Duck Creek Associates and Ed Salminen Consulting were subcontracted for watershed assessment and restoration planning in the Meacham Creek Subwatershed. A document detailing current

A comparison of the performance and compatibility of protocols used by seven monitoring groups to measure stream habitat in the Pacific Northwest

Science.gov (United States)

Brett B. Roper; John M. Buffington; Stephen Bennett; Steven H. Lanigan; Eric Archer; Scott T. Downie; John Faustini; Tracy W. Hillman; Shannon Hubler; Kim Jones; Chris Jordan; Philip R. Kaufmann; Glenn Merritt; Chris Moyer; Allen Pleus

2010-01-01

To comply with legal mandates, meet local management objectives, or both, many federal, state, and tribal organizations have monitoring groups that assess stream habitat at different scales. This myriad of groups has difficulty sharing data and scaling up stream habitat assessments to regional or national levels because of differences in their goals and data collection...

Impacts of habitat degradation and stream spatial location on biodiversity in a disturbed riverine landscape

DEFF Research Database (Denmark)

Göthe, Emma; Wiberg-Larsen, Peter; Kristensen, Esben Astrup

2015-01-01

gradients. We used macrophyte, fish and macroinvertebrate data from Danish lowland streams to investigate whether (1) high connectivity in reaches situated in lower parts of the stream network (downstream sites) generates high α-diversity, while dispersal limitation and high habitat heterogeneity across......The ongoing degradation of freshwater habitat quality and subsequent losses of biodiversity is alarming. One key to successful freshwater management is to understand how different scale-dependent diversity components (i.e. γ-, α- and β-diversity) change along present-day anthropogenic impact...... the more isolated upper reaches (headwater sites) generate high β-diversity, (2) γ-, α- and β- diversity decrease with increasing hydromorphological impact and (3) high connectivity in downstream reaches buffers against impacts on biodiversity. Results showed that α-diversity was higher in downstream sites...

Contaminants as habitat disturbers: PAH-driven drift by Andean paramo stream insects.

Science.gov (United States)

Araújo, Cristiano V M; Moreira-Santos, Matilde; Sousa, José P; Ochoa-Herrera, Valeria; Encalada, Andrea C; Ribeiro, Rui

2014-10-01

Contaminants can behave as toxicants, when toxic effects are observed in organisms, as well as habitat disturbers and fragmentors, by triggering avoidance responses and generating less- or uninhabited zones. Drift by stream insects has long been considered a mechanism to avoid contamination by moving to most favorable habitats. Given that exploration and transportation of crude oil represent a threat for surrounding ecosystems, the key goal of the present study was to assess the ability of autochthonous groups of aquatic insects from the Ecuadorian paramo streams to avoid by drift different concentrations of polycyclic aromatic hydrocarbons (PAH) contained in the soluble fraction of locally transported crude oil. In the laboratory, different groups of insects were exposed to PAH for 12h. Three different assays, which varied in taxa and origin of the organisms, concentrations of PAH (0.6-38.8µgL(-1)), and environment settings (different levels of refuge and flow) were performed. For Anomalocosmoecus palugillensis (Limnephilidae), drift was a major cause of population decline in low concentration treatments but at higher concentrations mortality dominated. PAH was highly lethal, even at lower concentrations, for Chironomidae, Grypopterygidae (Claudioperla sp.) and Hydrobiosidae (Atopsyche sp.), and, therefore, no conclusion about drift can be drawn for these insects. Contamination by PAH showed to be a threat for benthic aquatic insects from Ecuadorian paramo streams as it can cause a population decline due to avoidance by drift and mortality. Copyright © 2014 Elsevier Inc. All rights reserved.

Hydraulic modelling of the spatial and temporal variability in Atlantic salmon parr habitat availability in an upland stream.

Science.gov (United States)

Fabris, Luca; Malcolm, Iain Archibald; Buddendorf, Willem Bastiaan; Millidine, Karen Jane; Tetzlaff, Doerthe; Soulsby, Chris

2017-12-01

We show how spatial variability in channel bed morphology affects the hydraulic characteristics of river reaches available to Atlantic salmon parr (Salmo salar) under different flow conditions in an upland stream. The study stream, the Girnock Burn, is a long-term monitoring site in the Scottish Highlands. Six site characterised by different bed geometry and morphology were investigated. Detailed site bathymetries were collected and combined with discharge time series in a 2D hydraulic model to obtain spatially distributed depth-averaged velocities under different flow conditions. Available habitat (AH) was estimated for each site. Stream discharge was used according to the critical displacement velocity (CDV) approach. CDV defines a velocity threshold above which salmon parr are not able to hold station and effective feeding opportunities or habitat utilization are reduced, depending on fish size and water temperature. An average value of the relative available habitat () for the most significant period for parr growth - April to May - was used for inter-site comparison and to analyse temporal variations over 40years. Results show that some sites are more able than others to maintain zones where salmon parr can forage unimpeded by high flow velocities under both wet and dry conditions. With lower flow velocities, dry years offer higher values of than wet years. Even though can change considerably across the sites as stream flow changes, the directions of change are consistent. Relative available habitat (RAH) shows a strong relationship with discharge per unit width, whilst channel slope and bed roughness either do not have relevant impact or compensate each other. The results show that significant parr habitat was available at all sites across all flows during this critical growth period, suggesting that hydrological variability is not a factor limiting growth in the Girnock. Crown Copyright © 2017. Published by Elsevier B.V. All rights reserved.

Assessment of water chemistry, habitat, and benthic macroinvertebrates at selected stream-quality monitoring sites in Chester County, Pennsylvania, 1998-2000

Science.gov (United States)

Reif, Andrew G.

2004-01-01

Biological, chemical, and habitat data have been collected from a network of sites in Chester County, Pa., from 1970 to 2003 to assess stream quality. Forty sites in 6 major stream basins were sampled between 1998 and 2000. Biological data were used to determine levels of impairment in the benthic-macroinvertebrate community in Chester County streams and relate the impairment, in conjunction with chemical and habitat data, to overall stream quality. Biological data consisted of benthic-macroinvertebrate samples that were collected annually in the fall. Water-chemistry samples were collected and instream habitat was assessed in support of the biological sampling.Most sites in the network were designated as nonimpacted or slightly impacted by human activities or extreme climatic conditions on the basis of biological-metric analysis of benthic-macroinvertebrate data. Impacted sites were affected by factors, such as nutrient enrichment, erosion and sedimentation, point discharges, and droughts and floods. Streams in the Schuylkill River, Delaware River, and East Branch Brandywine Creek Basins in Chester County generally had low nutrient concentrations, except in areas affected by wastewater-treatment discharges, and stream habitat that was affected by erosion. Streams in the West Branch Brandywine, Christina, Big Elk, and Octoraro Creek Basins in Chester County generally had elevated nutrient concentrations and streambottom habitat that was affected by sediment deposition.Macroinvertebrate communities identified in samples from French Creek, Pigeon Creek (Schuylkill River Basin), and East Branch Brandywine Creek at Glenmoore consistently indicate good stream conditions and were the best conditions measured in the network. Macroinvertebrate communities identified in samples from Trout Creek (site 61), West Branch Red Clay Creek (site 55) (Christina River Basin), and Valley Creek near Atglen (site 34) (Octoraro Creek Basin) indicated fair to poor stream conditions and

Contrasting habitat associations of imperilled endemic stream fishes from a global biodiversity hot spot

Directory of Open Access Journals (Sweden)

Chakona Albert

2012-09-01

Full Text Available Abstract Background Knowledge of the factors that drive species distributions provides a fundamental baseline for several areas of research including biogeography, phylogeography and biodiversity conservation. Data from 148 minimally disturbed sites across a large drainage system in the Cape Floristic Region of South Africa were used to test the hypothesis that stream fishes have similar responses to environmental determinants of species distribution. Two complementary statistical approaches, boosted regression trees and hierarchical partitioning, were used to model the responses of four fish species to 11 environmental predictors, and to quantify the independent explanatory power of each predictor. Results Elevation, slope, stream size, depth and water temperature were identified by both approaches as the most important causal factors for the spatial distribution of the fishes. However, the species showed marked differences in their responses to these environmental variables. Elevation and slope were of primary importance for the laterally compressed Sandelia spp. which had an upstream boundary below 430 m above sea level. The fusiform shaped Pseudobarbus ‘Breede’ was strongly influenced by stream width and water temperature. The small anguilliform shaped Galaxias ‘nebula’ was more sensitive to stream size and depth, and also penetrated into reaches at higher elevation than Sandelia spp. and Pseudobarbus ‘Breede’. Conclusions The hypothesis that stream fishes have a common response to environmental descriptors is rejected. The contrasting habitat associations of stream fishes considered in this study could be a reflection of their morphological divergence which may allow them to exploit specific habitats that differ in their environmental stressors. Findings of this study encourage wider application of complementary methods in ecological studies, as they provide more confidence and deeper insights into the variables that should be

Habitat use and food partitioning of the fishes in a coastal stream of Atlantic Forest, Brazil

Directory of Open Access Journals (Sweden)

J. M. R. Aranha

1998-12-01

Full Text Available We analysed the fish assemblage in the "Mergulhão" stream (southern Brazil with underwater observations for habitat use, considering water depth, current velocity, bottom type, shadow from vegetation cover, distance of stream-edge, and vertical position. Stomach contents or foregut content samples of the most abundant species were collected from 26 species (10 families. The fish assemblage occupied the bottom stream. The similarity analysis of spatial occupation of species grouped four habitat use guilds: A "lambaris" (Astyanax sp. and Deuterodon langei, Characidium spp. (C. lanei and C. pterostictum and Rineloricaria kronei used the bottom in deep sites and waters with middle current; B Pimelodella pappenheimi and Corydoras barbatus used the bottom in sites with lower current; C Mimagoniates microlepis used the surface of the water column; and D Phalloceros caudimaculatus used shallow sites and waters without current. Species with few records were analysed descriptively. Diet similarity suggested seven trophic guilds: Microglanis sp. and Pimelodella pappenheimi: omnivorous/carnivorous guild; Corydoras barbatus: omnivorous/insectivorous guild; Characidium lanei: aquatic insectivorous guild, mainly aquatic insects; Mimagoniates microlepis: terrestrial insectivorous guild, mainly terrestrial insects; Deuterodon langei and Astyanax sp.: omnivorous/herbivorous guild; Rineloricaria kronei, Kronichthys subteres, Schizolecis guntheri, Hisonotus leucofrenatus and Pseudotothyris obtusa: herbivorous guild; and Phalloceros caudimaculatus: algivorous guild. When the guilds were similar, the species were generalists in diet and in habitat use.

Relation of urbanization to stream habitat and geomorphic characteristics in nine metropolitan areas of the United States

Science.gov (United States)

Fitzpatrick, Faith A.; Peppler, Marie C.

2010-01-01

The relation of urbanization to stream habitat and geomorphic characteristics was examined collectively and individually for nine metropolitan areas of the United States?Portland, Oregon; Salt Lake City, Utah; Denver, Colorado; Dallas?Forth Worth, Texas; Milwaukee?Green Bay, Wisconsin; Birmingham, Alabama; Atlanta, Georgia; Raleigh, North Carolina; and Boston, Massachusetts. The study was part of a larger study conducted by the U.S. Geological Survey from 1999 to 2004 to examine the effects of urbanization on the physical, chemical, and biological components of stream ecosystems. The objectives of the current study were to determine how stream habitat and geomorphic characteristics relate to different aspects of urbanization across a variety of diverse environmental settings and spatial scales. A space-for-time rural-to-urban land-cover gradient approach was used. Reach-scale habitat data and geomorphic characteristic data were collected once during low flow and included indicators of potential habitat degradation such as measures of channel geometry and hydraulics, streambed substrate, low-flow reach volume (an estimate of base-flow conditions), habitat complexity, and riparian/bank conditions. Hydrologic metrics included in the analyses were those expected to be altered by increases in impervious surfaces, such as high-flow frequency and duration, flashiness, and low-flow duration. Other natural and human features, such as reach-scale channel engineering, geologic setting, and slope, were quantified to identify their possible confounding influences on habitat relations with watershed-scale urbanization indicators. Habitat and geomorphic characteristics were compared to several watershed-scale indicators of urbanization, natural landscape characteristics, and hydrologic metrics by use of correlation analyses and stepwise linear regression. Habitat and geomorphic characteristics were related to percentages of impervious surfaces only in some metropolitan areas and

Evaluating the Effect of Green Infrastructure Stormwater Best Management Practices on New England Stream Habitat

Science.gov (United States)

The U.S. EPA is evaluating the effectiveness of green infrastructure (GI) stormwater best management practices (BMPs) on stream habitat at the small watershed (< HUC12) scale in New England. Predictive models for thermal regime and substrate characteristics (substrate size, % em...

Beaver dams maintain fish biodiversity by increasing habitat heterogeneity throughout a low-gradient stream network

Science.gov (United States)

Smith, Joseph M.; Mather, Martha E.

2013-01-01

Understanding the relationship between heterogeneity and biodiversity is an active focus of ecological research. Although habitat heterogeneity is conceptually linked to biodiversity, the amount and configuration of heterogeneity that maintains biodiversity within ecosystems is not well understood, especially for an entire stream network.

Re-Meandering of Lowland Streams

DEFF Research Database (Denmark)

Pedersen, Morten Lauge; Kristensen, Klaus Kevin; Friberg, Nikolai

2014-01-01

We evaluated the restoration of physical habitats and its influence on macroinvertebrate community structure in 18 Danish lowland streams comprising six restored streams, six streams with little physical alteration and six channelized streams. We hypothesized that physical habitats and macroinver...

Shifting stream planform state decreases stream productivity yet increases riparian animal production

Science.gov (United States)

Venarsky, Michael P.; Walters, David M.; Hall, Robert O.; Livers, Bridget; Wohl, Ellen

2018-01-01

In the Colorado Front Range (USA), disturbance history dictates stream planform. Undisturbed, old-growth streams have multiple channels and large amounts of wood and depositional habitat. Disturbed streams (wildfires and logging production, emerging aquatic insect flux, and riparian spider biomass. Organic matter and macroinvertebrate production did not differ among sites per unit area (m−2), but values were 2 ×–21 × higher in undisturbed reaches per unit of stream valley (m−1 valley) because total stream area was higher in undisturbed reaches. Insect emergence was similar among streams at the per unit area and per unit of stream valley. However, rescaling insect emergence to per meter of stream bank showed that the emerging insect biomass reaching the stream bank was lower in undisturbed sites because multi-channel reaches had 3 × more stream bank than single-channel reaches. Riparian spider biomass followed the same pattern as emerging aquatic insects, and we attribute this to bottom-up limitation caused by the multi-channeled undisturbed sites diluting prey quantity (emerging insects) reaching the stream bank (riparian spider habitat). These results show that historic landscape disturbances continue to influence stream and riparian communities in the Colorado Front Range. However, these legacy effects are only weakly influencing habitat-specific function and instead are primarily influencing stream–riparian community productivity by dictating both stream planform (total stream area, total stream bank length) and the proportional distribution of specific habitat types (pools vs riffles).

Ship Sensor Observations for Islands in the Stream 2002 - Deep Reef Habitat - Office of Ocean Exploration

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Hourly measurements made by selected ship sensors on the R/V Seward Johnson during the 2002 "Islands in the Stream - Deep Reef Habitat" expedition sponsored by the...

Shifting stream planform state decreases stream productivity yet increases riparian animal production

Science.gov (United States)

Venarsky, Michael P.; Walters, David M.; Hall, Robert O.; Livers, Bridget; Wohl, Ellen

2018-01-01

In the Colorado Front Range (USA), disturbance history dictates stream planform. Undisturbed, old-growth streams have multiple channels and large amounts of wood and depositional habitat. Disturbed streams (wildfires and logging tested how these opposing stream states influenced organic matter, benthic macroinvertebrate secondary production, emerging aquatic insect flux, and riparian spider biomass. Organic matter and macroinvertebrate production did not differ among sites per unit area (m−2), but values were 2 ×–21 × higher in undisturbed reaches per unit of stream valley (m−1 valley) because total stream area was higher in undisturbed reaches. Insect emergence was similar among streams at the per unit area and per unit of stream valley. However, rescaling insect emergence to per meter of stream bank showed that the emerging insect biomass reaching the stream bank was lower in undisturbed sites because multi-channel reaches had 3 × more stream bank than single-channel reaches. Riparian spider biomass followed the same pattern as emerging aquatic insects, and we attribute this to bottom-up limitation caused by the multi-channeled undisturbed sites diluting prey quantity (emerging insects) reaching the stream bank (riparian spider habitat). These results show that historic landscape disturbances continue to influence stream and riparian communities in the Colorado Front Range. However, these legacy effects are only weakly influencing habitat-specific function and instead are primarily influencing stream–riparian community productivity by dictating both stream planform (total stream area, total stream bank length) and the proportional distribution of specific habitat types (pools vs riffles).

Fish distribution and abundance in mediterranean streams:the role of habitat quality, spatial context, and movement patterns

OpenAIRE

Pires, Daniel Filipe Carvalho Miranda, 1977-

2012-01-01

Tese de doutoramento, Biologia (Ecologia), Universidade de Lisboa, Faculdade de Ciências, 2012 Patterns of fish distribution and abundance in streams are currently thought of as a product of multi-scale factors. Local habitats, spatial relationships and movement are increasingly emerging as drivers of population and assemblage dynamics, though the way in which these factors may interplay remains poorly addressed, particularly in temporary streams. This dissertation addressed the role of mu...

Effects of Channelisation, Riparian Structure and Catchment Area on Physical Habitats in Small Lowland Streams

DEFF Research Database (Denmark)

Pedersen, Morten Lauge

2009-01-01

Rivers and streams form a longitudinal network in which physical conditions and biological processes change through the river system. Geomorphology, topography, geology and hydraulic conditions change from site to site within the river system, thereby creating a complex network of reaches that ar.......e. a confined and steep valley (V-shaped) is less likely to be used for agricultural production compared to a broad valley. The results are useful to water managers, who seek to identify natural and impacted physical conditions in large river systems....... that are dominated by a hierarchy of physical processes. The complexity is further enhanced by local human alteration of the physical structure, natural processes and alteration of the riparian areas. The aim of the study was to analyse variations in land use and riparian characteristics along small Danish streams...... and to determine the effect of channelisation on physical habitats. Physical stream characteristics were measured in 149 stream small and medium sized Danish streams (catchment area: 0.1 to 67.2 km2). The measured physical parameters included discharge, stream slope, width, depth, current velocity, substrata...

Considering direct and indirect habitat influences on stream biota in eco-geomorphology research to better understand, model, and manage riverine ecosystems

Science.gov (United States)

Cienciala, P.; Nelson, A. D.

2017-12-01

The field of fluvial eco-geomorphology strives to improve the understanding of interactions between physical and biological processes in running waters. This body of research has greatly contributed to the advancement of integrated river science and management. Arguably, the most popular research themes in eco-geomorphology include hydrogemorphic controls of habitat quality and effects of disturbances such as floods, sediment transport events or sediment accumulation. However, in contrast to the related field of ecology, the distinction between direct and indirect mechanisms which may affect habitat quality and biotic response to disturbance has been poorly explored in eco-geomorphic research. This knowledge gap poses an important challenge for interpretations of field observations and model development. In this research, using the examples of benthic invertebrates and fish, we examine the importance of direct and indirect influences that geomorphic and hydraulic processes may exert on stream biota. We also investigate their implications for modeling of organism-habitat relationships. To achieve our goal, we integrate field and remote sensing data from montane streams in the Pacific Northwest region with habitat models. Preliminary results indicate that indirect hydrogeomorphic influences of stream organisms, such as those mediated by altered availability of food resources, can be as important as direct influences (e.g. physical disturbance). We suggest that these findings may also have important implications for modeling of riverine habitat.

Toward a Rapid Synthesis of Field and Desktop Data for Classifying Streams in the Pacific Northwest: Guiding the Sampling and Management of Salmonid Habitat

Science.gov (United States)

Kasprak, A.; Wheaton, J. M.; Bouwes, N.; Weber, N. P.; Trahan, N. C.; Jordan, C. E.

2012-12-01

River managers often seek to understand habitat availability and quality for riverine organisms within the physical template provided by their landscape. Yet the large amount of natural heterogeneity in landscapes gives rise to stream systems which are highly variable over small spatial scales, potentially complicating site selection for surveying aquatic habitat while simultaneously making a simple, wide-reaching management strategy elusive. This is particularly true in the rugged John Day River Basin of northern Oregon, where efforts as part of the Columbia Habitat Monitoring Program to conduct site-based surveys of physical habitat for endangered steelhead salmon (Oncorhynchus mykiss) are underway. As a complete understanding of the type and distribution of habitat available to these fish would require visits to all streams in the basin (impractical due to its large size), here we develop an approach for classifying channel types which combines remote desktop GIS analyses with rapid field-based stream and landscape surveys. At the core of this method, we build off of the River Styles Framework, an open-ended and process-based approach for classifying streams and informing management decisions. This framework is combined with on-the-ground fluvial audits, which aim to quickly and continuously map sediment dynamics and channel behavior along selected channels. Validation of this classification method is completed by on-the-ground stream surveys using a digital iPad platform and by rapid small aircraft overflights to confirm or refine predictions. We further compare this method with existing channel classification approaches for the region (e.g. Beechie, Montgomery and Buffington). The results of this study will help guide both the refinement of site stratification and selection for salmonid habitat monitoring within the basin, and will be vital in designing and prioritizing restoration and management strategies tailored to the distribution of river styles found

Ice processes affect habitat use and movements of adult cutthroat trout and brook trout in a Wyoming foothills stream

Science.gov (United States)

Lindstrom, J.W.; Hubert, W.A.

2004-01-01

Habitat use and movements of 25 adult cutthroat trout Oncorhynchus clarkii and 25 adult brook trout Salvelinus fontinalis from fall through winter 2002-2003 were assessed by means of radiotelemetry in a 7-km reach of a Rocky Mountains foothills stream. Temporal dynamics of winter habitat conditions were evaluated by regularly measuring the features of 30 pools and 5 beaver Castor canadensis ponds in the study reach. Groundwater inputs at three locations raised mean daily water temperatures in the stream channel during winter to 0.2-0.6??C and kept at least 250 m of the downstream channel free of ice, but the lack of surface ice further downstream led to the occurrence of frazil ice and anchor ice in pools and unstable habitat conditions for trout. Pools in segments that were not affected by groundwater inputs and beaver ponds tended to be stable and snow accumulated on the surface ice. Pools throughout the study reach tended to become more stable as snow accumulated. Both cutthroat trout and brook trout selected beaver ponds as winter progressed but tended to use lateral scour pools in proportion to their availability. Tagged fish not in beaver ponds selected lateral scour pools that were deeper than average and stable during winter. Movement frequencies by tagged fish decreased from fall through winter, but some individuals of both species moved during winter. Ice processes affected both the habitat use and movement patterns of cutthroat trout and brook trout in this foothills stream.

Salmon River Habitat Enhancement, 1989 Annual Report.

Energy Technology Data Exchange (ETDEWEB)

Rowe, Mike

1989-04-01

This project was funded by the Bonneville Power Administration (BPA). The annual report contains three individual subproject papers detailing tribal fisheries work completed during the summer and fall of 1989. Subproject 1 contains summaries of evaluation/monitoring efforts associated with the Bear Valley Creek, Idaho enhancement project. Subproject 2 contains an evaluation of the Yankee Fork of the Salmon River habitat enhancement project. This report has been sub-divided into two parts: Part 1; stream evaluation and Part 2; pond series evaluation. Subproject 3 concerns the East Fork of the Salmon River, Idaho. This report summarizes the evaluation of the project to date including the 1989 pre-construction evaluation conducted within the East Fork drainage. Dredge mining has degraded spawning and rearing habitat for chinook salmon and steelhead trout in the Yankee Fork drainage of the Salmon River and in Bear Valley Creek. Mining, agricultural, and grazing practices degraded habitat in the East Fork of the Salmon River. Biological monitoring of the success of habitat enhancement for Bear Valley Creek and Yankee Fork are presented in this report. Physical and biological inventories prior to habitat enhancement in East Fork were also conducted. Four series of off-channel ponds of the Yankee Fork are shown to provide effective rearing habitat for chinook salmon. 45 refs., 49 figs., 24 tabs.

The role of groundwater in the effect of climatic warming on stream habitat of brook trout

International Nuclear Information System (INIS)

Meisner, J.D.

1990-01-01

Freshwater fisheries are linked to climate through the variables of water temperature, water quality and water quantity. These three ecosystem linkages provide a basis for assessments of potential impacts of climate change on fisheries resources. A characteristic of fisheries resources, whether it be the size or distribution of fish populations, or a measure of yield, which can be related to climate through one or more of these linkages, is a useful tool with which to forecast the effects of climate change. A stream population of brook trout is a coldwater fisheries resource that is linked to climate by groundwater. Stream dwelling brook trout at low altitudes rely heavily on groundwater discharge in summer to maintain low stream temperature. Groundwater temperature tracks mean annual air temperature due to the insulative effect of the lower troposphere on the surface of the earth. The effect of elevated groundwater temperature on the stream habitat of brook trout was investigated in two brook trout streams north of Toronto, Ontario, with an energy balance stream temperature model, calibrated to both streams to simulate maximum water temperature observed in the brook trout zones. Simulated maximum summer temperatures from the Goddard Institute for Space Studies scenario reduced the brook trout zones by up to 42%. 17 refs., 2 figs

Stream network geomorphology mediates predicted vulnerability of anadromous fish habitat to hydrologic change in southeast Alaska

Science.gov (United States)

Matthew R. Sloat; Gordon H. Reeves; Kelly R. Christiansen

2016-01-01

In rivers supporting Pacific salmon in southeast Alaska, USA, regional trends toward a warmer, wetter climate are predicted to increase mid- and late-21st-century mean annual flood size by 17% and 28%, respectively. Increased flood size could alter stream habitats used by Pacific salmon for reproduction, with negative consequences for the substantial economic, cultural...

Salmon River Habitat Enhancement, 1984 Annual Report.

Energy Technology Data Exchange (ETDEWEB)

Konopacky, Richard C.

1986-04-01

This report has four volumes: a Tribal project annual report (Part 1) and three reports (Parts 2, 3, and 4) prepared for the Tribes by their engineering subcontractor. The Tribal project annual report contains reports for four subprojects within Project 83-359. Subproject I involved habitat and fish inventories in Bear Valley Creek, Valley County, Idaho that will be used to evaluate responses to ongoing habitat enhancement. Subproject II is the coordination/planning activities of the Project Leader in relation to other BPA-funded habitat enhancement projects that have or will occur within the traditional Treaty (Fort Bridger Treaty of 1868) fishing areas of the Shoshone-Bannock Tribes, Fort Hall Reservation, Idaho. Subproject III involved habitat and fish inventories (pretreatment) and habitat problem identification on the Yankee Fork of the Salmon River (including Jordan Creek). Subproject IV during 1985 involved habitat problem identification in the East Fork of the Salmon River and habitat and fish inventories (pretreatment) in Herd Creek, a tributary to the East Fork.

Macrophytes, epipelic biofilm, and invertebrates as biotic indicators of physical habitat degradation of lowland streams (Argentina).

Science.gov (United States)

Cortelezzi, Agustina; Sierra, María Victoria; Gómez, Nora; Marinelli, Claudia; Rodrigues Capítulo, Alberto

2013-07-01

Our objective was to assess the effect of the physical habitat degradation in three lowland streams of Argentina that are subject to different land uses. To address this matter, we looked into some physical habitat alterations, mainly the water quality and channel changes, the impact on macrophytes' community, and the structural and functional descriptors of the epipelic biofilm and invertebrate assemblages. As a consequence of physical and chemical perturbations, we differentiated sampling sites with different degradation levels. The low degraded sites were affected mainly for the suburban land use, the moderately degraded sites for the rural land use, and the highly degraded sites for the urban land use. The data shows that the biotic descriptors that best reflected the environmental degradation were vegetation cover and macrophytes richness, the dominance of tolerant species (epipelic biofilm and invertebrates), algal biomass, O2 consumption by the epipelic biofilm, and invertebrates' richness and diversity. Furthermore, the results obtained highlight the importance of the macrophytes in the lowland streams, where there is a poor diversification of abiotic substrates and where the macrophytes not only provide shelter but also a food source for invertebrates and other trophic levels such as fish. We also noted that both in benthic communities, invertebrates and epipelic biofilm supplied different information: the habitat's physical structure provided by the macrophytes influenced mainly the invertebrate descriptors; meanwhile, the water quality mainly influenced most of the epipelic biofilm descriptors.

Wildlife habitat, range, recreation, hydrology, and related research using Forest Inventory and Analysis surveys: a 12-year compendium

Science.gov (United States)

Victor A. Rudis

1991-01-01

More than 400 publications are listed for the period 1979 to 1990; these focus on water, range, wildlife habitat, recreation, and related studies derived from U.S. Department of Agriculture, forest Service, Forest Inventory and Analysis unit surveys conducted on private and public land in the continental United States. Included is an overview of problems and progress...

Habitat selection and overlap of Atlantic salmon and smallmouth bass juveniles in nursery streams

Science.gov (United States)

Wathen, G.; Coghlan, S.M.; Zydlewski, Joseph D.; Trial, J.G.

2011-01-01

Introduced smallmouth bass Micropterus dolomieu have invaded much of the historic freshwater habitat of Atlantic salmon Salmo salar in North America, yet little is known about the ecological interactions between the two species. We investigated the possibility of competition for habitat between age-0 Atlantic salmon and age-0 and age-1 smallmouth bass by means of in situ observations and a mesocosm experiment. We used snorkel observation to identify the degree and timing of overlap in habitat use in our in situ observations and to describe habitat shifts by Atlantic salmon in the presence of smallmouth bass in our mesocosm experiments. In late July 2008, we observed substantial overlap in the depths and mean water column velocities used by both species in sympatric in situ conditions and an apparent shift by age-0 Atlantic salmon to shallower water that coincided with the period of high overlap. In the mesocosm experiments, we detected no overlap or habitat shifts by age-0 Atlantic salmon in the presence age-1 smallmouth bass and low overlap and no habitat shifts of Atlantic salmon and age-0 smallmouth bass in fall 2009. In 2009, summer floods with sustained high flows and low temperatures resulted in the nearly complete reproductive failure of the smallmouth bass in our study streams, and we did not observe a midsummer habitat shift by Atlantic salmon similar to that seen in 2008. Although this prevented us from replicating our 2008 experiments under similar conditions, the virtual year-class failure of smallmouth bass itself is enlightening. We suggest that future studies incorporate the effects of varying temperature and discharge to determine how abiotic factors affect the interactions between these species and thus mediate the outcomes of potential competition.

PRELIMINARY FLORISTIC INVENTORY OF HUARIPAMPA AND SANTA CRUZ STREAMS: HUASCARÁN NATIONAL PARK, ANCASH, PERU

OpenAIRE

Casana, Jorge; Leal-Pinedo, Jorge; Casana, Ramón

2010-01-01

A preliminary floristic inventory is provided for the Huaripampa and Santa Cruz streams in the Santa Cruz, Huaripampa and Llanganuco route at the Huascarán National Park, located among the Provinces of Huaylas and Yungay, Deparment of Ancash, Peru. This circuit presents a high concurrence of national and foreigner tourists. It is notable for its landscape scenery, its biological structure and its proximity to the mountains Alpamayo, Artesonraju, Yanapaccha, Pisco, Huascarán and Hu...

Stream systems.

Science.gov (United States)

Jack E. Williams; Gordon H. Reeves

2006-01-01

Restored, high-quality streams provide innumerable benefits to society. In the Pacific Northwest, high-quality stream habitat often is associated with an abundance of salmonid fishes such as chinook salmon (Oncorhynchus tshawytscha), coho salmon (O. kisutch), and steelhead (O. mykiss). Many other native...

Evaluation of Macroinvertebrate Communities and Habitat for Selected Stream Reaches at Los Alamos National Laboratory

Energy Technology Data Exchange (ETDEWEB)

L.J. Henne; K.J. Buckley

2005-08-12

This is the second aquatic biological monitoring report generated by Los Alamos National Laboratory's (LANL's) Water Quality and Hydrology Group. The study has been conducted to generate impact-based assessments of habitat and water quality for LANL waterways. The monitoring program was designed to allow for the detection of spatial and temporal trends in water and habitat quality through ongoing, biannual monitoring of habitat characteristics and benthic aquatic macroinvertebrate communities at six key sites in Los Alamos, Sandia, Water, Pajarito, and Starmer's Gulch Canyons. Data were collected on aquatic habitat characteristics, channel substrate, and macroinvertebrate communities during 2001 and 2002. Aquatic habitat scores were stable between 2001 and 2002 at all locations except Starmer's Gulch and Pajarito Canyon, which had lower scores in 2002 due to low flow conditions. Channel substrate changes were most evident at the upper Los Alamos and Pajarito study reaches. The macroinvertebrate Stream Condition Index (SCI) indicated moderate to severe impairment at upper Los Alamos Canyon, slight to moderate impairment at upper Sandia Canyon, and little or no impairment at lower Sandia Canyon, Starmer's Gulch, and Pajarito Canyon. Habitat, substrate, and macroinvertebrate data from the site in upper Los Alamos Canyon indicated severe impacts from the Cerro Grande Fire of 2000. Impairment in the macroinvertebrate community at upper Sandia Canyon was probably due to effluent-dominated flow at that site. The minimal impairment SCI scores for the lower Sandia site indicated that water quality improved with distance downstream from the outfall at upper Sandia Canyon.

Stream invertebrate productivity linked to forest subsidies: 37 stream-years of reference and experimental data.

Science.gov (United States)

Wallace, J Bruce; Eggert, Susan L; Meyer, Judy L; Webster, Jackson R

2015-05-01

Riparian habitats provide detrital subsidies of varying quantities and qualities to recipient ecosystems. We used long-term data from three reference streams (covering 24 stream-years) and 13-year whole-stream organic matter manipulations to investigate the influence of terrestrial detrital quantity and quality on benthic invertebrate community structure, abundance, biomass, and secondary production in rockface (RF) and mixed substrates (MS) of forested headwater streams. Using a mesh canopy covering the entire treatment stream, we examined effects of litter ex'clusion, small- and large-wood removal, and addition of artificial wood (PVC) and leaves of varying quality on organic matter standing crops and invertebrate community structure and function. We assessed differences in functional feeding group distribution between substrate types as influenced by organic matter manipulations and long-term patterns of predator and prey production in manipulated vs. reference years. Particulate organic matter standing crops in MS of the treatment stream declined drastically with each successive year of litter exclusion, approaching zero after three years. Monthly invertebrate biomass and annual secondary production was positively related to benthic organic matter in the MS habitats. Rockface habitats exhibited fewer changes than MS habitats across all organic matter manipulations. With leaf addition, the patterns of functional group distribution among MS and RF habitats returned to patterns seen in reference streams. Secondary production per unit organic matter standing crop was greatest for the leaf addition period, followed by the reference streams, and significantly less for the litter exclusion and wood removal periods. These data indicate that the limited organic matter remaining in the stream following litter exclusion and wood removal was more refractory than that in the reference streams, whereas the added leaf material was more labile and readily converted into

Salamander occupancy in headwater stream networks

Science.gov (United States)

Grant, E.H.C.; Green, L.E.; Lowe, W.H.

2009-01-01

1. Stream ecosystems exhibit a highly consistent dendritic geometry in which linear habitat units intersect to create a hierarchical network of connected branches. 2. Ecological and life history traits of species living in streams, such as the potential for overland movement, may interact with this architecture to shape patterns of occupancy and response to disturbance. Specifically, large-scale habitat alteration that fragments stream networks and reduces connectivity may reduce the probability a stream is occupied by sensitive species, such as stream salamanders. 3. We collected habitat occupancy data on four species of stream salamanders in first-order (i.e. headwater) streams in undeveloped and urbanised regions of the eastern U.S.A. We then used an information-theoretic approach to test alternative models of salamander occupancy based on a priori predictions of the effects of network configuration, region and salamander life history. 4. Across all four species, we found that streams connected to other first-order streams had higher occupancy than those flowing directly into larger streams and rivers. For three of the four species, occupancy was lower in the urbanised region than in the undeveloped region. 5. These results demonstrate that the spatial configuration of stream networks within protected areas affects the occurrences of stream salamander species. We strongly encourage preservation of network connections between first-order streams in conservation planning and management decisions that may affect stream species.

Effects of an Experimental Enrichment of Instream Habitat Heterogeneity on the Stream Bed Morphology and Chironomid Community of a Straightened Section in a Sandy Lowland Stream

Science.gov (United States)

Spänhoff, Bernd; Riss, Wolfgang; Jäkel, Paul; Dakkak, Nadja; Meyer, Elisabeth I.

2006-02-01

A straightened stream stretch with poor habitat heterogeneity was divided into a “control” section with a low amount of submerged woody debris and an experimentally “wood-enriched” downstream section to study the effect of enhanced habitat diversity on the benthic invertebrate community. The downstream section was enriched by fixing 25 wood packages constructed from 9-10 branches on the stream bottom. Succession processes occurring in the two stream sections were compared by chironomid exuviae drift from July to November 2000 and from April to August 2001. During the first sampling period, more drifting chironomid exuviae (medians of control vs. wood-enriched: 446 vs. 331, no significant difference) and total number of taxa (44 vs. 36, Wilcoxon signed-rank test P = 0.019) were recorded for the control section. Although species compositions of both stream sections were highly similar (Sørensen index: 0.83) the diversity in the wood-enriched section was distinctly lower compared to the control section (Shannon-Weaver index: 1.19 vs. 1.50). During the second sampling period, exuviae numbers remained higher in the control section (median: 326 vs. 166), but total numbers of taxa were nearly equal (51 vs. 49), as well as species diversity (Shannon-Weaver index: 1.67 vs. 1.64). The lower chironomid diversity observed during the first sampling period coincided with a gradual but significant change of the streambed morphology in the wood-enriched section. There, the initially more U-shaped profile (V/U = 0.81 ± 0.37) had turned into a pronounced V shape (V/U = 1.14 ± 0.21), whereas the control section retained its unaltered U shape (V/U = 0.62-0.75). This small-scale study on experimental of woody debris in sandy lowland streams showed that the negative impact of increased hydraulic disturbance of the existing streambed more than outweighed any positive impact resulting from the increase in woody debris.

Physical habitat simulation system reference manual: version II

Science.gov (United States)

Milhous, Robert T.; Updike, Marlys A.; Schneider, Diane M.

1989-01-01

There are four major components of a stream system that determine the productivity of the fishery (Karr and Dudley 1978). These are: (1) flow regime, (2) physical habitat structure (channel form, substrate distribution, and riparian vegetation), (3) water quality (including temperature), and (4) energy inputs from the watershed (sediments, nutrients, and organic matter). The complex interaction of these components determines the primary production, secondary production, and fish population of the stream reach. The basic components and interactions needed to simulate fish populations as a function of management alternatives are illustrated in Figure I.1. The assessment process utilizes a hierarchical and modular approach combined with computer simulation techniques. The modular components represent the "building blocks" for the simulation. The quality of the physical habitat is a function of flow and, therefore, varies in quality and quantity over the range of the flow regime. The conceptual framework of the Incremental Methodology and guidelines for its application are described in "A Guide to Stream Habitat Analysis Using the Instream Flow Incremental Methodology" (Bovee 1982). Simulation of physical habitat is accomplished using the physical structure of the stream and streamflow. The modification of physical habitat by temperature and water quality is analyzed separately from physical habitat simulation. Temperature in a stream varies with the seasons, local meteorological conditions, stream network configuration, and the flow regime; thus, the temperature influences on habitat must be analysed on a stream system basis. Water quality under natural conditions is strongly influenced by climate and the geological materials, with the result that there is considerable natural variation in water quality. When we add the activities of man, the possible range of water quality possibilities becomes rather large. Consequently, water quality must also be analysed on a

Trophic basis of production for a mayfly in a North Island, New Zealand, forest stream : contributions of benthic versus hyporheic habitats and implications for restoration

International Nuclear Information System (INIS)

Collier, K.J.; Wright-Stow, A.E.; Smith, B.J.

2004-01-01

The leptophlebiid mayfly Acanthophlebia cruentata (Hudson) is restricted to the North Island and some associated offshore islands of northern New Zealand where it commonly occurs in benthic and hyporheic habitats of forested streams. We investigated: (1) life history; (2) secondary production in benthic and hyporheic habitats; and (3) major energy sources contributing to nutrition and production of this species in a pristine forest stream. Most nymphal size classes were present throughout the year, and emergence extended over several months, peaking from February to April. Despite apparently having extended emergence and recruitment periods, Acanthophlebia exhibited a predominantly univoltine life history. Annual benthic production (calculated by the size-frequency method) was 0.318 g dry mass (DM) m -2 year -1 , compared to 4.601 g DM m -2 year -1 in high-density benthic habitats at the tails of pools, and 34.476 g m -3 year -1 for colonisation baskets set at 15-45 cm deep in the substratum. On a habitat weighted basis averaged out over the entire sampling reach, it was estimated that 76% of annual production occurred in hyporheic habitats >10 cm below the streambed surface. Gut contents were dominated by fine particulate matter (FPM) ≤75 μm and larger inorganic material on all dates in individuals from both benthic and hyporheic habitats. Fungi were relatively abundant in guts of benthic animals collected on some dates, whereas spores and pollen were relatively common food items in both habitats on occasions. Analysis of the trophic basis of production, based on gut contents and assumed assimilation and net production efficiencies, indicated that benthic secondary production was supported largely by fungi (48% of production) and FPM (37%), whereas FPM supported a higher level of hyporheic production (52%) than fungi (27%). Although stable carbon isotope values suggested dependence on epilithon, the enriched δ 15 N values for this food source implicated the

User's guide to FBASE: Relational database software for managing R1/R4 (Northern/Intermountain Regions) fish habitat inventory data

Science.gov (United States)

Sherry P. Wollrab

1999-01-01

FBASE is a microcomputer relational database package that handles data collected using the R1/R4 Fish and Fish Habitat Standard Inventory Procedures (Overton and others 1997). FBASE contains standard data entry screens, data validations for quality control, data maintenance features, and summary report options. This program also prepares data for importation into an...

Fishery population and habitat assessment in Puerto Rico streams: phase 2 final report

Science.gov (United States)

Kwak, Thomas J.; Smith, William E.; Buttermore, Elissa N.; Cooney, Patrick B.; Cope, W. Gregory

2013-01-01

This document serves as the Final Report for research on Puerto Rico stream fishes and their habitat funded by the Puerto Rico Department of Natural and Environmental Resources, in the form of a grant to the North Carolina Cooperative Fish and Wildlife Research Unit. This research was also conducted to meet the thesis requirement for a Master of Science degree granted to Elissa Buttermore (Chapters 3–4) and the dissertation requirement for a Doctor of Philospophy degree granted to William Smith (Chapters 5–8). Formatting differs among chapters, as each was developed to target a specific scientific journal and to conform to journal style.

Re-meandering of lowland streams: will disobeying the laws of geomorphology have ecological consequences?

Science.gov (United States)

Pedersen, Morten Lauge; Kristensen, Klaus Kevin; Friberg, Nikolai

2014-01-01

We evaluated the restoration of physical habitats and its influence on macroinvertebrate community structure in 18 Danish lowland streams comprising six restored streams, six streams with little physical alteration and six channelized streams. We hypothesized that physical habitats and macroinvertebrate communities of restored streams would resemble those of natural streams, while those of the channelized streams would differ from both restored and near-natural streams. Physical habitats were surveyed for substrate composition, depth, width and current velocity. Macroinvertebrates were sampled along 100 m reaches in each stream, in edge habitats and in riffle/run habitats located in the center of the stream. Restoration significantly altered the physical conditions and affected the interactions between stream habitat heterogeneity and macroinvertebrate diversity. The substrate in the restored streams was dominated by pebble, whereas the substrate in the channelized and natural streams was dominated by sand. In the natural streams a relationship was identified between slope and pebble/gravel coverage, indicating a coupling of energy and substrate characteristics. Such a relationship did not occur in the channelized or in the restored streams where placement of large amounts of pebble/gravel distorted the natural relationship. The analyses revealed, a direct link between substrate heterogeneity and macroinvertebrate diversity in the natural streams. A similar relationship was not found in either the channelized or the restored streams, which we attribute to a de-coupling of the natural relationship between benthic community diversity and physical habitat diversity. Our study results suggest that restoration schemes should aim at restoring the natural physical structural complexity in the streams and at the same time enhance the possibility of re-generating the natural geomorphological processes sustaining the habitats in streams and rivers. Documentation of

InSTREAM: the individual-based stream trout research and environmental assessment model

Science.gov (United States)

Steven F. Railsback; Bret C. Harvey; Stephen K. Jackson; Roland H. Lamberson

2009-01-01

This report documents Version 4.2 of InSTREAM, including its formulation, software, and application to research and management problems. InSTREAM is a simulation model designed to understand how stream and river salmonid populations respond to habitat alteration, including altered flow, temperature, and turbidity regimes and changes in channel morphology. The model...

Landsat TM inventory and assessment of waterbird habitat in the southern altiplano of South America

Science.gov (United States)

Boyle, T.P.; Caziani, S.M.; Waltermire, R.G.

2004-01-01

The diverse set of wetlands in southern altiplano of South America supports a number of endemic and migratory waterbirds. These species include endangered endemic flamingos and shorebirds that nest in North America and winter in the altiplano. This research developed maps from nine Landsat Thematic Mapper (TM) images (254,300 km2) to provide an inventory of aquatic waterbird habitats. Image processing software was used to produce a map with a classification of wetlands according to the habitat requirements of different types of waterbirds. A hierarchical procedure was used to, first, isolate the bodies of water within the TM image; second, execute an unsupervised classification on the subsetted image to produce 300 signatures of cover types, which were further subdivided as necessary. Third, each of the classifications was examined in the light of field data and personal experience for relevance to the determination of the various habitat types. Finally, the signatures were applied to the entire image and other adjacent images to yield a map depicting the location of the various waterbird habitats in the southern altiplano. The data sets referenced with a global positioning system receiver were used to test the classification system. Multivariate analysis of the bird communities censused at each lake by individual habitats indicated a salinity gradient, and then the depth of the water separated the birds. Multivariate analysis of the chemical and physical data from the lakes showed that the variation in lakes were significantly associated with difference in depth, transparency, latitude, elevation, and pH. The presence of gravel bottoms was also one of the qualities distinguishing a group of lakes. This information will be directly useful to the Flamingo Census Project and serve as an element for risk assessment for future development.

Initial Radionuclide Inventories

Energy Technology Data Exchange (ETDEWEB)

H. Miller

2004-09-19

The purpose of this analysis is to provide an initial radionuclide inventory (in grams per waste package) and associated uncertainty distributions for use in the Total System Performance Assessment for the License Application (TSPA-LA) in support of the license application for the repository at Yucca Mountain, Nevada. This document is intended for use in postclosure analysis only. Bounding waste stream information and data were collected that capture probable limits. For commercially generated waste, this analysis considers alternative waste stream projections to bound the characteristics of wastes likely to be encountered using arrival scenarios that potentially impact the commercial spent nuclear fuel (CSNF) waste stream. For TSPA-LA, this radionuclide inventory analysis considers U.S. Department of Energy (DOE) high-level radioactive waste (DHLW) glass and two types of spent nuclear fuel (SNF): CSNF and DOE-owned (DSNF). These wastes are placed in two groups of waste packages: the CSNF waste package and the codisposal waste package (CDSP), which are designated to contain DHLW glass and DSNF, or DHLW glass only. The radionuclide inventory for naval SNF is provided separately in the classified ''Naval Nuclear Propulsion Program Technical Support Document'' for the License Application. As noted previously, the radionuclide inventory data presented here is intended only for TSPA-LA postclosure calculations. It is not applicable to preclosure safety calculations. Safe storage, transportation, and ultimate disposal of these wastes require safety analyses to support the design and licensing of repository equipment and facilities. These analyses will require radionuclide inventories to represent the radioactive source term that must be accommodated during handling, storage and disposition of these wastes. This analysis uses the best available information to identify the radionuclide inventory that is expected at the last year of last emplacement

Colonization and extinction in dynamic habitats: an occupancy approach for a Great Plains stream fish assemblage.

Science.gov (United States)

Falke, Jeffrey A; Bailey, Larissa L; Fausch, Kurt D; Bestgen, Kevin R

2012-04-01

Despite the importance of habitat in determining species distribution and persistence, habitat dynamics are rarely modeled in studies of metapopulations. We used an integrated habitat-occupancy model to simultaneously quantify habitat change, site fidelity, and local colonization and extinction rates for larvae of a suite of Great Plains stream fishes in the Arikaree River, eastern Colorado, USA, across three years. Sites were located along a gradient of flow intermittency and groundwater connectivity. Hydrology varied across years: the first and third being relatively wet and the second dry. Despite hydrologic variation, our results indicated that site suitability was random from one year to the next. Occupancy probabilities were also independent of previous habitat and occupancy state for most species, indicating little site fidelity. Climate and groundwater connectivity were important drivers of local extinction and colonization, but the importance of groundwater differed between periods. Across species, site extinction probabilities were highest during the transition from wet to dry conditions (range: 0.52-0.98), and the effect of groundwater was apparent with higher extinction probabilities for sites not fed by groundwater. Colonization probabilities during this period were relatively low for both previously dry sites (range: 0.02-0.38) and previously wet sites (range: 0.02-0.43). In contrast, no sites dried or remained dry during the transition from dry to wet conditions, yielding lower but still substantial extinction probabilities (range: 0.16-0.63) and higher colonization probabilities (range: 0.06-0.86), with little difference among sites with and without groundwater. This approach of jointly modeling both habitat change and species occupancy will likely be useful to incorporate effects of dynamic habitat on metapopulation processes and to better inform appropriate conservation actions.

Coupled stream and population dynamics: Modeling the role beaver (Castor canadensis) play in generating juvenile steelhead (Oncorhynchus mykiss) habitat

Science.gov (United States)

Jordan, C.; Bouwes, N.; Wheaton, J. M.; Pollock, M.

2013-12-01

Over the past several centuries, the population of North American Beaver has been dramatically reduced through fur trapping. As a result, the geomorphic impacts long-term beaver occupancy and activity can have on fluvial systems have been lost, both from the landscape and from our collective memory such that physical and biological models of floodplain system function neither consider nor have the capacity to incorporate the role beaver can play in structuring the dynamics of streams. Concomitant with the decline in beaver populations was an increasing pressure on streams and floodplains through human activity, placing numerous species of stream rearing fishes in peril, most notably the ESA listing of trout and salmon populations across the entirety of the Western US. The rehabilitation of stream systems is seen as one of the primary means by which population and ecosystem recovery can be achieved, yet the methods of stream rehabilitation are applied almost exclusively with the expected outcome of a static idealized stream planform, occasionally with an acknowledgement of restoring processes rather than form and only rarely with the goal of a beaver dominated riverscape. We have constructed an individual based model of trout and beaver populations that allows the exploration of fish population dynamics as a function of stream habitat quality and quantity. We based the simulation tool on Bridge Creek (John Day River basin, Oregon) where we have implemented a large-scale restoration experiment using wooden posts to provide beavers with stable platforms for dam building and to simulate the dams themselves. Extensive monitoring captured geomorphic and riparian changes, as well as fish and beaver population responses; information we use to parameterize the model as to the geomorphic and fish response to dam building beavers. In the simulation environment, stream habitat quality and quantity can be manipulated directly through rehabilitation actions and indirectly

Asotin Creek instream habitat alteration projects : habitat evaluation, adult and juvenile habitat utilization and water temperature monitoring : 2001 progress report

International Nuclear Information System (INIS)

Bumgarner, Joseph D.

2002-01-01

Asotin Creek originates from a network of deeply incised streams on the slopes of the Blue Mountains of southeastern Washington. The watershed drains an area of 322 square miles that provides a mean annual flow of 74 cfs. The geomorphology of the watershed exerts a strong influence on biologic conditions for fish within the stream. Historic and contemporary land-use practices have had a profound impact on the kind, abundance, and distribution of anadromous salmonids in the watershed. Fish habitat in Asotin Creek and other local streams has been affected by agricultural development, grazing, tilling practices, logging, recreational activities and implementation of flood control structures (Neilson 1950). The Asotin Creek Model Watershed Master Plan was completed in 1994. The plan was developed by a landowner steering committee for the Asotin County Conservation District (ACCD), with technical support from various Federal, State and local entities. Actions identified within the plan to improve the Asotin Creek ecosystem fall into four main categories: (1) Stream and Riparian, (2) Forestland, (3) Rangeland, and (4) Cropland. Specific actions to be carried out within the stream and in the riparian area to improve fish habitat were: (1) create more pools, (2) increase the amount of large organic debris (LOD), (3) increase the riparian buffer zone through tree planting, and (4) increase fencing to limit livestock access. All of these actions, in combination with other activities identified in the Plan, are intended to stabilize the river channel, reduce sediment input, increase the amount of available fish habitat (adult and juvenile) and protect private property. Evaluation work described within this report was to document the success or failure of the program regarding the first two items listed (increasing pools and LOD). Beginning in 1996, the ACCD, with cooperation from local landowners and funding from Bonneville Power Administration began constructing instream

The relationship of metals, bifenthrin, physical habitat metrics, grain size, total organic carbon, dissolved oxygen and conductivity to Hyalella sp. abundance in urban California streams.

Science.gov (United States)

Hall, Lenwood W; Anderson, Ronald D

2013-01-01

The objectives of this study were to determine the relationship between Hyalella sp. abundance in four urban California streams and the following parameters: (1) 8 bulk metals (As, Cd, Cr, Cu, Pb, Hg, Ni, and Zn) and their associated sediment Threshold Effect Levels (TELs); (2) bifenthrin sediment concentrations; (3) 10 habitat metrics and total score; (4) grain size (% sand, silt and clay); (5) Total Organic Carbon (TOC); (6) dissolved oxygen; and (7) conductivity. California stream data used for this study were collected from Kirker Creek (2006 and 2007), Pleasant Grove Creek (2006, 2007 and 2008), Salinas streams (2009 and 2010) and Arcade Creek (2009 and 2010). Hyalella abundance in the four California streams generally declined when metals concentrations were elevated beyond the TELs. There was also a statistically significant negative relationship between Hyalella abundance and % silt for these 4 California streams as Hyalella were generally not present in silt areas. No statistically significant relationships were reported between Hyalella abundance and metals concentrations, bifenthrin concentrations, habitat metrics, % sand, % clay, TOC, dissolved oxygen and conductivity. The results from this study highlight the complexity of assessing which factors are responsible for determining the abundance of amphipods, such as Hyalella sp., in the natural environment.

CTUIR Umatilla Anadromous Fisheries Habitat Project : A Columbia River Basin Fish Habitat Project 2008 Annual Report.

Energy Technology Data Exchange (ETDEWEB)

Hoverson, Eric D.; Amonette, Alexandra

2009-02-09

The Umatilla Anadromous Fisheries Habitat Project (UAFHP) is an ongoing effort to protect, enhance, and restore riparian and instream habitat for the natural production of anadromous salmonids in the Umatilla River Basin, Northeast Oregon. Flow quantity, water temperature, passage, and lack of in-stream channel complexity have been identified as the key limiting factors in the basin. During the 2008 Fiscal Year (FY) reporting period (February 1, 2008-January 31, 2009) primary project activities focused on improving instream and riparian habitat complexity, migrational passage, and restoring natural channel morphology and floodplain function. Eight primary fisheries habitat enhancement projects were implemented on Meacham Creek, Birch Creek, West Birch Creek, McKay Creek, West Fork Spring Hollow, and the Umatilla River. Specific restoration actions included: (1) rectifying one fish passage barrier on West Birch Creek; (2) participating in six projects planting 10,000 trees and seeding 3225 pounds of native grasses; (3) donating 1000 ft of fencing and 1208 fence posts and associated hardware for 3.6 miles of livestock exclusion fencing projects in riparian areas of West Birch and Meacham Creek, and for tree screens to protect against beaver damage on West Fork Spring Hollow Creek; (4) using biological control (insects) to reduce noxious weeds on three treatment areas covering five acres on Meacham Creek; (5) planning activities for a levee setback project on Meacham Creek. We participated in additional secondary projects as opportunities arose. Baseline and ongoing monitoring and evaluation activities were also completed on major project areas such as conducting photo point monitoring strategies activities at the Meacham Creek Large Wood Implementation Project site (FY2006) and at additional easements and planned project sites. Fish surveys and aquatic habitat inventories were conducted at project sites prior to implementation. Proper selection and implementation of

Local Geomorphology as a Determinant of Macrofaunal Production in a Mountain Stream.

Science.gov (United States)

Huryn, Alexander D; Wallace, J Bruce

1987-12-01

By comparing distributions of functional group production among different habitats in an Appalachian mountain stream, the influence of site-specific geomorphology upon the overall functional group composition of the animal community was demonstrated. By replicated monthly sampling, substrate particle size distributions, current velocity, standing crops of benthic organic matter, and production of macrofauna were measured in each of three principal habitats: bedrock-outcrop, riffle, and pool. Samples were taken at randomly assigned locations and the relative number of samples taken from each habitat was assumed to be proportional to the area of the habitat within the stream. These proportions were used to weight production measured in each habitat and the resulting values were summed to obtain production per unit area of average stream bed. The bedrock-outcrop habitat was characterized by high material entertainment and export as indicated by significantly higher current velocities and lower standing crops of detritus compared to the riffle and pool habitats. Pools were sites of low entertainment and high retention of organic matter as demonstrated by significantly lower current velocities and higher accumulations of detritus than other habitats. The riffle habitat was intermediate to the bedrock-outcrop and pool habitats in all parameters measured. Annual production of collector-filterers was highest in the bedrock-outcrop (ash-free dry mass 1920 mg/m 2 ), followed by riffle (278 mg/m 2 ) and pool (32 mg/m 2 ). Although constituting only 19% of the stream area, the bedrock-outcrop habitat contributed 68% of the habitat-weighted collector-filterer production. Annual production of shredders was highest in pools (2616 mg/m 2 ), followed by riffles (1657 mg/m 2 ) and bedrock-outcrop (579 mg/m 2 ). The pool habitat, constituting 23% of stream area, contributed 36% of shredder production. Annual production of scrapers was highest in the riffle habitat (905 mg/m 2

Is the Stream Always Bluer on the Other Side?

Science.gov (United States)

Jenkins, T.; Chase, Z.

2017-12-01

Examining water quality, fish species present, habitat quality, and sources of pollution are important to better understanding the health of a stream. In Florida, the Fish and Wildlife Conservation Commission (FWC) works to monitor the health of its streams, and partnerships with . By collecting, analyzing, and comparing fish abundance data from a couple of streams in Escambia County, Florida, we can help FWC determine how to best support and protect stream habitats and fish-species in our Florida community.

Habitat stability and occurrences of malaria vector larvae in western Kenya highlands

Directory of Open Access Journals (Sweden)

Atieli Harrysone

2009-10-01

Full Text Available Abstract Background Although the occurrence of malaria vector larvae in the valleys of western Kenya highlands is well documented, knowledge of larval habitats in the uphill sites is lacking. Given that most inhabitants of the highlands actually dwell in the uphill regions, it is important to develop understanding of mosquito breeding habitat stability in these sites in order to determine their potential for larval control. Methods A total of 128 potential larval habitats were identified in hilltops and along the seasonal streams in the Sigalagala area of Kakamega district, western Kenya. Water availability in the habitats was followed up daily from August 3, 2006 to February 23, 2007. A habitat is defined as stable when it remains aquatic continuously for at least 12 d. Mosquito larvae were observed weekly. Frequencies of aquatic, stable and larvae positive habitats were compared between the hilltop and seasonal stream area using χ2-test. Factors affecting the presence/absence of Anopheles gambiae larvae in the highlands were determined using multiple logistic regression analysis. Results Topography significantly affected habitat availability and stability. The occurrence of aquatic habitats in the hilltop was more sporadic than in the stream area. The percentage of habitat occurrences that were classified as stable during the rainy season is 48.76% and 80.79% respectively for the hilltop and stream area. Corresponding frequencies of larvae positive habitats were 0% in the hilltop and 5.91% in the stream area. After the rainy season, only 23.42% of habitat occurrences were stable and 0.01% larvae positive habitats were found in the hilltops, whereas 89.75% of occurrences remained stable in the stream area resulting in a frequency of 12.21% larvae positive habitats. The logistic regression analysis confirmed the association between habitat stability and larval occurrence and indicated that habitat surface area was negatively affecting the

An ecohydrological stream type cassification of intermittent and ephemeral streams in the Southwestern United States 2397

Science.gov (United States)

Ephemeral and intermittent streams are the predominant fluvial forms in arid and semi-arid environments. Various studies have shown biological and habitat diversity in these lands to be considerably higher along stream corridors in comparison to adjacent uplands, yet knowledge of how these streams f...

A Collaborative Geospatial Shoreline Inventory Tool to Guide Coastal Development and Habitat Conservation

Directory of Open Access Journals (Sweden)

Peter Gies

2013-05-01

Full Text Available We are developing a geospatial inventory tool that will guide habitat conservation, restoration and coastal development and benefit several stakeholders who seek mitigation and adaptation strategies to shoreline changes resulting from erosion and sea level rise. The ESRI Geoportal Server, which is a type of web portal used to find and access geospatial information in a central repository, is customized by adding a Geoinventory tool capability that allows any shoreline related data to be searched, displayed and analyzed on a map viewer. Users will be able to select sections of the shoreline and generate statistical reports in the map viewer to allow for comparisons. The tool will also facilitate map-based discussion forums and creation of user groups to encourage citizen participation in decisions regarding shoreline stabilization and restoration, thereby promoting sustainable coastal development.

Stream invertebrate productivity linked to forest subsidies: 37 stream-years of reference and experimental data

Science.gov (United States)

J. Bruce Wallace; Susan L Eggert; Judy L. Meyer; Jackson R. Webster

2015-01-01

Riparian habitats provide detrital subsidies of varying quantities and qualities to recipient ecosystems. We used long-term data from three reference streams (covering 24 stream-years) and 13-year whole-stream organic matter manipulations to investigate the influence of terrestrial detrital quantity and quality on benthic invertebrate community structure, abundance,...

A study of the effects of implementing agricultural best management practices and in-stream restoration on suspended sediment, stream habitat, and benthic macroinvertebrates at three stream sites in Surry County, North Carolina, 2004-2007-Lessons learned

Science.gov (United States)

Smith, Douglas G.; Ferrell, G.M.; Harned, Douglas A.; Cuffney, Thomas F.

2011-01-01

The effects of agricultural best management practices and in-stream restoration on suspended-sediment concentrations, stream habitat, and benthic macroinvertebrate assemblages were examined in a comparative study of three small, rural stream basins in the Piedmont and Blue Ridge Physiographic Provinces of North Carolina and Virginia between 2004 and 2007. The study was designed to assess changes in stream quality associated with stream-improvement efforts at two sites in comparison to a control site (Hogan Creek), for which no improvements were planned. In the drainage basin of one of the stream-improvement sites (Bull Creek), several agricultural best management practices, primarily designed to limit cattle access to streams, were implemented during this study. In the drainage basin of the second stream-improvement site (Pauls Creek), a 1,600-foot reach of the stream channel was restored and several agricultural best management practices were implemented. Streamflow conditions in the vicinity of the study area were similar to or less than the long-term annual mean streamflows during the study. Precipitation during the study period also was less than normal, and the geographic distribution of precipitation indicated drier conditions in the southern part of the study area than in the northern part. Dry conditions during much of the study limited opportunities for acquiring high-flow sediment samples and streamflow measurements. Suspended-sediment yields for the three basins were compared to yield estimates for streams in the southeastern United States. Concentrations of suspended sediment and nutrients in samples from Bull Creek, the site where best management practices were implemented, were high compared to the other two sites. No statistically significant change in suspended-sediment concentrations occurred at the Bull Creek site following implementation of best management practices. However, data collected before and after channel stabilization at the Pauls

Geomorphic, flood, and groundwater-flow characteristics of Bayfield Peninsula streams, Wisconsin, and implications for brook-trout habitat

Science.gov (United States)

Fitzpatrick, Faith A.; Peppler, Marie C.; Saad, David A.; Pratt, Dennis M.; Lenz, Bernard N.

2015-01-01

In 2002–03, the U.S. Geological Survey conducted a study of the geomorphic, flood, and groundwater-flow characteristics of five Bayfield Peninsula streams, Wisconsin (Cranberry River, Bark River, Raspberry River, Sioux River, and Whittlesey Creek) to determine the physical limitations for brook-trout habitat. The goals of the study were threefold: (1) to describe geomorphic characteristics and processes, (2) to determine how land-cover characteristics affect flood peaks, and (3) to determine how regional groundwater flow patterns affect base flow.

Coldwater fish in wadeable streams [Chapter 8

Science.gov (United States)

Jason B. Dunham; Amanda E. Rosenberger; Russell F. Thurow; C. Andrew Dolloff; Philip J. Howell

2009-01-01

Small, wadeable streams comprise the majority of habitats available to fishes in fluvial networks. Wadeable streams are generally less than 1 m deep, and fish can be sampled without the use of water craft. Cold waters are defined as having mean 7-d summer maximum water temperatures of less than 20°C and providing habitat for coldwater fishes.

Influence of habitat and land use on the assemblages of ephemeroptera, plecoptera, and trichoptera in neotropical streams.

Science.gov (United States)

Amaral, Pedro Henrique Monteiro do; Silveira, Lidimara Souza da; Rosa, Beatriz Figueiraujo Jabour Vescovi; Oliveira, Vívian Campos de; Alves, Roberto da Gama

2015-01-01

Insects of the orders Ephemeroptera, Plecoptera, and Trichoptera (EPT) are often used to assess the conditions of aquatic environments, but few studies have examined the differences in these communities between riffles and pools. Our objective was to test whether riffles shelter greater richness and abundance of EPT, as well as to assess the sensitivity of these insects for detecting impacts from different land uses in streams in southeastern Brazil. Samples were collected in the dry season of 2012 with a Surber sampler in riffles and pools of nine streams (forest, pasture, and urban areas). Principal component analysis distinguished the streams according to different land uses as a function of percentage of plant cover and water oxygenation level and showed partial distinction between riffles and pools as a function of current speed and percentage of ultrafine sand. Detrended correspondence analysis indicated the distinction in EPT composition between riffles and pools, except in urban streams. The results of this study confirm the expected differences in the EPT fauna structure between riffles and pools, especially in forest and pasture environments. The individual metrics of riffle and pool assemblages showed significantly different responses to land use. Therefore, we suggest individual sampling of riffles and pools, since the metrics of these assemblages' insects can differ between these habitats and influence the results of assessments in low-order streams. © The Author 2015. Published by Oxford University Press on behalf of the Entomological Society of America.

Measurement of the Ecological Integrity of Cerrado Streams Using Biological Metrics and the Index of Habitat Integrity

Directory of Open Access Journals (Sweden)

Deusiano Florêncio dos Reis

2017-01-01

Full Text Available Generally, aquatic communities reflect the effects of anthropogenic changes such as deforestation or organic pollution. The Cerrado stands among the most threatened ecosystems by human activities in Brazil. In order to evaluate the ecological integrity of the streams in a preserved watershed in the Northern Cerrado biome corresponding to a mosaic of ecosystems in transition to the Amazonia biome in Brazil, biological metrics related to diversity, structure, and sensitivity of aquatic macroinvertebrates were calculated. Sampling included collections along stretches of 200 m of nine streams and measurements of abiotic variables (temperature, electrical conductivity, pH, total dissolved solids, dissolved oxygen, and discharge and the Index of Habitat Integrity (HII. The values of the abiotic variables and the HII indicated that most of the streams have good ecological integrity, due to high oxygen levels and low concentrations of dissolved solids and electric conductivity. Two streams showed altered HII scores mainly related to small dams for recreational and domestic use, use of Cerrado natural pasture for cattle raising, and spot deforestation in bathing areas. However, this finding is not reflected in the biological metrics that were used. Considering all nine streams, only two showed satisfactory ecological quality (measured by Biological Monitoring Working Party (BMWP, total richness, and EPT (Ephemeroptera, Plecoptera, and Trichoptera richness, only one of which had a low HII score. These results indicate that punctual measures of abiotic parameters do not reveal the long-term impacts of anthropic activities in these streams, including related fire management of pasture that annually alters the vegetation matrix and may act as a disturbance for the macroinvertebrate communities. Due to this, biomonitoring of low order streams in Cerrado ecosystems of the Northern Central Brazil by different biotic metrics and also physical attributes of the

US Department of Energy interim mixed waste inventory report: Waste streams, treatment capacities and technologies

International Nuclear Information System (INIS)

1993-04-01

The United States Department of Energy (DOE) has prepared this report to provide an inventory of its mixed wastes and treatment capacities and technologies in response to section 3021(a) of the Resource Conservation and Recovery Act (RCRA), as amended by section 105(a) of the Federal Facility Compliance Act (FFCA) of 1992 (Pub. L. No. 102-386). DOE has prepared this report for submission to EPA and the States in which DOE stores, generates, or treats mixed wastes. As required by the FFCA, this report contains: a national inventory of all mixed wastes in the DOE system that are currently stored or will be generated over the next five years, including waste stream name, description, EPA waste codes, basis for characterization (i.e., sampling and analysis or process knowledge), effect of radionuclides on treatment, quantity stored that is subject to the Land Disposal Restrictions (LDRs) storage prohibition, quantity stored that is not subject to the LDRS, expected generation over the next five years, Best Demonstrated Available Technology (BDAT) used for developing the LDR requirements, and waste minimization activities; and a national inventory of mixed waste treatment capacities and technologies, including information such as the descriptions, capacities, and locations of all existing and proposed treatment facilities, explanations for not including certain existing facilities in capacity evaluations, information to support decisions on unavailability of treatment technologies for certain mixed wastes, and the planned technology development activities

Lake Roosevelt Rainbow Trout Habitat/Passage Improvement Project, Annual Report 2002-2003.

Energy Technology Data Exchange (ETDEWEB)

Sears, Sheryl

2004-01-01

The construction of Chief Joseph and Grand Coulee Dams completely and irrevocably blocked anadromous fish migrations to the Upper Columbia River. Historically this area hosted vast numbers of salmon returning to their natal waters to reproduce and die. For the native peoples of the region, salmon and steelhead were a principle food source, providing physical nourishment and spiritual sustenance, and contributing to the religious practices and the cultural basis of tribal communities. The decaying remains of spawned-out salmon carcasses contributed untold amounts of nutrients into the aquatic, aerial, and terrestrial ecosystems of tributary habitats in the upper basin. Near the present site of Kettle Falls, Washington, the second largest Indian fishery in the state existed for thousands of years. Returning salmon were caught in nets and baskets or speared on their migration to the headwater of the Columbia River in British Columbia. Catch estimates at Kettle Falls range from 600,000 in 1940 to two (2) million around the turn of the century (UCUT, Report No.2). The loss of anadromous fish limited the opportunities for fisheries management and enhancement exclusively to those actions addressed to resident fish. The Lake Roosevelt Rainbow Trout Habitat/Passage Improvement Project is a mitigation project intended to enhance resident fish populations and to partially mitigate for anadromous fish losses caused by hydropower system impacts. This substitution of resident fish for anadromous fish losses is considered in-place and out-of-kind mitigation. Upstream migration and passage barriers limit the amount of spawning and rearing habitat that might otherwise be utilized by rainbow trout. The results of even limited stream surveys and habitat inventories indicated that a potential for increased natural production exists. However, the lack of any comprehensive enhancement measures prompted the Upper Columbia United Tribes Fisheries Center (UCUT), Colville Confederated

Lake Roosevelt Rainbow Trout Habitat/Passage Improvement Project, Annual Report 2001-2002.

Energy Technology Data Exchange (ETDEWEB)

Sears, Sheryl

2003-01-01

The construction of Chief Joseph and Grand Coulee Dams completely and irrevocably blocked anadromous fish migrations to the Upper Columbia River. Historically this area hosted vast numbers of salmon returning to their natal waters to reproduce and die. For the native peoples of the region, salmon and steelhead were a principle food source, providing physical nourishment and spiritual sustenance, and contributing to the religious practices and the cultural basis of tribal communities. The decaying remains of spawned-out salmon carcasses contributed untold amounts of nutrients into the aquatic, aerial, and terrestrial ecosystems of tributary habitats in the upper basin. Near the present site of Kettle Falls, Washington, the second largest Indian fishery in the state existed for thousands of years. Returning salmon were caught in nets and baskets or speared on their migration to the headwater of the Columbia River in British Columbia. Catch estimates at Kettle Falls range from 600,000 in 1940 to two (2) million around the turn of the century (UCUT, Report No.2). The loss of anadromous fish limited the opportunities for fisheries management and enhancement exclusively to those actions addressed to resident fish. The Lake Roosevelt Rainbow Trout Habitat/Passage Improvement Project is a mitigation project intended to enhance resident fish populations and to partially mitigate for anadromous fish losses caused by hydropower system impacts. This substitution of resident fish for anadromous fish losses is considered in-place and out-of-kind mitigation. Upstream migration and passage barriers limit the amount of spawning and rearing habitat that might otherwise be utilized by rainbow trout. The results of even limited stream surveys and habitat inventories indicated that a potential for increased natural production exists. However, the lack of any comprehensive enhancement measures prompted the Upper Columbia United Tribes Fisheries Center (UCUT), Colville Confederated

National Wetlands Inventory Lines

Data.gov (United States)

Minnesota Department of Natural Resources — Linear wetland features (including selected streams, ditches, and narrow wetland bodies) mapped as part of the National Wetlands Inventory (NWI). The National...

Stream characteristics and their implications for the protection of riparian fens and meadows

DEFF Research Database (Denmark)

Baattrup-Pedersen, A.; Larsen, S.E.; Andersen, Peter Mejlhede

2011-01-01

the influence of stream size, morphology and chemical water characteristics for the distribution of water-dependent terrestrial habitat types, i.e. alkaline fens, periodically inundated meadows and meadows in riparian areas in Denmark using an extensive data set covering a total of 254 stream reaches. A species......1. Running waters, including associated riparian areas, are embraced by international legal frameworks outlining targets for the preservation, protection and improvement of the quality of the environment. Interactions between stream and river processes and riparian habitats have not received much...... attention in the management of stream ecosystems, and integrated measures that consider both the ecological status of streams and rivers (sensu EU Water Framework Directive, WFD) and the conservation status of riparian habitats and species (sensu EU Habitats Directive, HD) are rare. 2. Here, we analysed...

Habitat associations of small mammals in southern Brazil and use of regurgitated pellets of birds of prey for inventorying a local fauna

Directory of Open Access Journals (Sweden)

DR. Scheibler

Full Text Available We inventoried terrestrial small mammals in an agricultural area in southern Brazil by using trapping and prey consumed by Barn Owls (Tyto alba and White-tailed Kites (Elanus leucurus. Small mammals were trapped in three habitat types: corn fields, uncultivated fields ("capoeiras", and native forest fragments. A total of 1,975 small mammal specimens were trapped, another 2,062 identified from the diet of Barn Owls, and 2,066 from the diet of White-tailed Kites. Both trapping and prey in the predators' diet yielded 18 small mammal species: three marsupials (Didelphis albiventris, Gracilinanus agilis, and Monodelphis dimidiata and 15 rodents (Akodon paranaensis, Bruceppatersonius iheringi, Calomys sp., Cavia aperea, Euryzygomatomys spinosus, Holochilus brasiliensis, Mus musculus, Necromys lasiurus, Nectomys squamipes, Oligoryzomys nigripes, Oryzomys angouya, Oxymycterus sp.1, Oxymycterus sp.2, Rattus norvegicus, and Rattus rattus (Linnaeus, 1758. The greatest richness was found in the uncultivated habitat. We concluded that the three methods studied for inventorying small mammals (prey in the diet of Barn Owls, White-tailed Kites, and trapping were complementary, since together, rather than separately, they produced a better picture of local richness.

Aquatic habitats of Canaan Valley, West Virginia: Diversity and environmental threats

Science.gov (United States)

Snyder, C.D.; Young, J.A.; Stout, B. M.

2006-01-01

We conducted surveys of aquatic habitats during the spring and summer of 1995 in Canaan Valley, WV, to describe the diversity of aquatic habitats in the valley and identify issues that may threaten the viability of aquatic species. We assessed physical habitat and water chemistry of 126 ponds and 82 stream sites, and related habitat characteristics to landscape variables such as geology and terrain. Based on our analyses, we found two issues likely to affect the viability of aquatic populations in the valley. The first issue was acid rain and the extent to which it potentially limits the distribution of aquatic and semi-aquatic species, particularly in headwater portions of the watershed. We estimate that nearly 46%, or 56 kilometers of stream, had pH levels that would not support survival and reproduction of Salvelinuw fontinalis (brook trout), one of the most acid-tolerant fishes in the eastern US. The second issue was the influence of Castor canadensis (beaver) activity. In the Canaan Valley State Park portion of the valley, beaver have transformed 4.7 kilometers of stream (approximately 17% of the total) to pond habitat through their dam building. This has resulted in an increase in pond habitat, a decrease in stream habitat, and a fragmented stream network (i.e., beaver ponds dispersed among stream reaches). In addition, beaver have eliminated an undetermined amount of forested riparian area through their foraging activities. Depending on the perspective, beaver-mediated changes can be viewed as positive or negative. Increases in pond habitat may increase habitat heterogeneity with consequent increases in biological diversity. In contrast, flooding associated with beaver activity may eliminate lowland wetlands and associated species, create barriers to fish dispersal, and possibly contribute to low dissolved oxygen levels in the Blackwater River. We recommend that future management strategies for the wildlife refuge be viewed in the context of these two issues

Habitat adaptation rather than genetic distance correlates with female preference in fire salamanders (Salamandra salamandra

Directory of Open Access Journals (Sweden)

Weitere Markus

2009-06-01

Full Text Available Abstract Background Although some mechanisms of habitat adaptation of conspecific populations have been recently elucidated, the evolution of female preference has rarely been addressed as a force driving habitat adaptation in natural settings. Habitat adaptation of fire salamanders (Salamandra salamandra, as found in Middle Europe (Germany, can be framed in an explicit phylogeographic framework that allows for the evolution of habitat adaptation between distinct populations to be traced. Typically, females of S. salamandra only deposit their larvae in small permanent streams. However, some populations of the western post-glacial recolonization lineage use small temporary ponds as larval habitats. Pond larvae display several habitat-specific adaptations that are absent in stream-adapted larvae. We conducted mate preference tests with females from three distinct German populations in order to determine the influence of habitat adaptation versus neutral genetic distance on female mate choice. Two populations that we tested belong to the western post-glacial recolonization group, but are adapted to either stream or pond habitats. The third population is adapted to streams but represents the eastern recolonization lineage. Results Despite large genetic distances with FST values around 0.5, the stream-adapted females preferred males from the same habitat type regardless of genetic distance. Conversely, pond-adapted females did not prefer males from their own population when compared to stream-adapted individuals of either lineage. Conclusion A comparative analysis of our data showed that habitat adaptation rather than neutral genetic distance correlates with female preference in these salamanders, and that habitat-dependent female preference of a specific pond-reproducing population may have been lost during adaptation to the novel environmental conditions of ponds.

Ship Sensor Observations for Islands in the Stream 2002 - Exploration of Outer Shelf and Slope Habitats off the Coast of North Carolina - Office of Ocean Exploration

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Hourly measurements made by selected ship sensors on the R/V Seward Johnson during the 2002 "Islands in the Stream - Exploration of Outer Shelf and Slope Habitats...

The importance of ambient sound level to characterise anuran habitat.

Directory of Open Access Journals (Sweden)

Sandra Goutte

Full Text Available Habitat characterisation is a pivotal step of any animal ecology study. The choice of variables used to describe habitats is crucial and need to be relevant to the ecology and behaviour of the species, in order to reflect biologically meaningful distribution patterns. In many species, acoustic communication is critical to individuals' interactions, and it is expected that ambient acoustic conditions impact their local distribution. Yet, classic animal ecology rarely integrates an acoustic dimension in habitat descriptions. Here we show that ambient sound pressure level (SPL is a strong predictor of calling site selection in acoustically active frog species. In comparison to six other habitat-related variables (i.e. air and water temperature, depth, width and slope of the stream, substrate, SPL had the most important explanatory power in microhabitat selection for the 34 sampled species. Ambient noise was particularly useful in differentiating two stream-associated guilds: torrents and calmer streams dwelling species. Guild definitions were strongly supported by SPL, whereas slope, which is commonly used in stream-associated habitat, had a weak explanatory power. Moreover, slope measures are non-standardized across studies and are difficult to assess at small scale. We argue that including an acoustic descriptor will improve habitat-species analyses for many acoustically active taxa. SPL integrates habitat topology and temporal information (such as weather and hour of the day, for example and is a simple and precise measure. We suggest that habitat description in animal ecology should include an acoustic measure such as noise level because it may explain previously misunderstood distribution patterns.

Movement, demographics, and occupancy dynamics of a federally-threatened salamander: evaluating the adequacy of critical habitat

Directory of Open Access Journals (Sweden)

Nathan F. Bendik

2016-03-01

Full Text Available Critical habitat for many species is often limited to occupied localities. For rare and cryptic species, or those lacking sufficient data, occupied habitats may go unrecognized, potentially hindering species recovery. Proposed critical habitat for the aquatic Jollyville Plateau salamander (Eurycea tonkawae and two sister species were delineated based on the assumption that surface habitat is restricted to springs and excludes intervening stream reaches. To test this assumption, we performed two studies to understand aspects of individual, population, and metapopulation ecology of E. tonkawae. First, we examined movement and population demographics using capture-recapture along a spring-influenced stream reach. We then extended our investigation of stream habitat use with a study of occupancy and habitat dynamics in multiple headwater streams. Indications of extensive stream channel use based on capture-recapture results included frequent movements of >15 m, and high juvenile abundance downstream of the spring. Initial occupancy of E. tonkawae was associated with shallow depths, maidenhair fern presence and low temperature variation (indicative of groundwater influence, although many occupied sites were far from known springs. Additionally, previously dry sites were three times more likely to be colonized than wet sites. Our results indicate extensive use of stream habitats, including intermittent ones, by E. tonkawae. These areas may be important for maintaining population connectivity or even as primary habitat patches. Restricting critical habitat to occupied sites will result in a mismatch with actual habitat use, particularly when assumptions of habitat use are untested, thus limiting the potential for recovery.

HABITAT USE BY NATIVE AND STOCKED TROUT (SALMO TRUTTA L. IN TWO NORTHEAST STREAMS, PORTUGAL

Directory of Open Access Journals (Sweden)

TEIXEIRA A.

2006-04-01

Full Text Available Habitat use by stocked and native brown trout (Salmo trutta L. was assessed in two headwater streams of North-eastern Portugal. Underwater observations were made during the summer season in three successive years to evaluate the effect of supplemental trout stocking. Multivariate analysis techniques applied to data sets on microhabitat use were exploited to identify the focal elevation (distance of fish from the bottom, total depth and cover as the variables that contribute most to the discrimination between stocked and native trout. Preference curves computed for native and stocked trout of the same age (1+, showed a distinct pattern in their ability to explore the available microhabitat resources. Stocked trout tended to occupy deeper pools (total depth > 100 cm vs. 60-100 cm for native trout, holding higher focal elevations (140-160 cm vs. 22.5 cm and cover (combination of boulders and overhanging vegetation or undercut banks. Furthermore, a high poststocking movement of 80% hatchery-reared fish was verified just one month after their release, suggesting that stocking did not contribute to the sustainable populations in either stream, and is far from being an adequate management technique.

Lower Red River Meadow Stream Restoration Project

International Nuclear Information System (INIS)

1996-05-01

As part of a continuing effort to restore anadromous fish populations in the South Fork Clearwater River basin of Idaho, Bonneville Power Administration (BPA) proposes to fund the Lower Red River Meadow Restoration Project (Project). The Project is a cooperative effort with the Idaho Soil and Water Conservation District, Nez Perce National Forest, Idaho Department of Fish and Game (IDFG), and the Nez Perce Tribe of Idaho. The proposed action would allow the sponsors to perform stream bank stabilization, aquatic and riparian habitat improvement activities on IDFG's Red River Management Area and to secure long-term conservation contracts or agreements for conducting streambank and habitat improvement activities with participating private landowners located in the Idaho County, Idaho, study area. This preliminary Environmental Assessment (EA) examines the potential environmental effects of stabilizing the stream channel, restoring juvenile fish rearing habitat and reestablishing a riparian shrub community along the stream

Headwater streams in the EU Water Framework Directive: Evidence-based decision support to select streams for river basin management plans

DEFF Research Database (Denmark)

Baattrup-Pedersen, Annette; Larsen, Søren Erik; Andersen, Dagmar K.

2018-01-01

, however, it is intensely debated whether the small size and low slopes, typical of Danish streams, in combination with degraded habitat conditions obstruct their ability to fulfill the ecological quality objectives required by the EU Water Framework Directive (WFD). The purpose of this studywas to provide...... an analytically based framework for guiding the selection of headwater streams for RBMP. Specifically, the following hypotheses were addressed: i) stream slope, width, planform, and general physical habitat quality can act as criteria for selecting streams for the next generation of RBMPs, and ii) probability......-based thresholds for reaching good ecological status can be established for some or all of these criteria, thus creating a sound, scientifically based, and clear selection process. The hypotheses were tested using monitoring data on Danish streams from the period 2004–2015. Significant linear relationships were...

Habitat segregation in fish assemblages

OpenAIRE

Ibbotson, A.T.

1990-01-01

The segregation of habitats of fish assemblages found in the chalk streams and rivers within the Wessex, South West and Southern Water Authority boundaries in southern England have been examined. Habitat segregation is the most frequent type of resource partitioning in natural communities. The habitat of individual fish species will be defined in order to determine the following: (1) the requirements of each species in terms of depth, current velocity, substrate, cover etc.; (2) identify the ...

Evaluating habitat associations of a fish assemblage at multiple spatial scales in a minimally disturbed stream using low-cost remote sensing

Science.gov (United States)

Cheek, Brandon D.; Grabowski, Timothy B.; Bean, Preston T.; Groeschel, Jillian R.; Magnelia, Stephan J.

2016-01-01

Habitat heterogeneity at multiple scales is a major factor affecting fish assemblage structure. However, assessments that examine these relationships at multiple scales concurrently are lacking. The lack of assessments at these scales is a critical gap in understanding as conservation and restoration efforts typically work at these levels.A combination of low-cost side-scan sonar surveys, aerial imagery using an unmanned aerial vehicle, and fish collections were used to evaluate the relationship between physicochemical and landscape variables at various spatial scales (e.g. micro-mesohabitat, mesohabitat, channel unit, stream reach) and stream–fish assemblage structure and habitat associations in the South Llano River, a spring-fed second-order stream on the Edwards Plateau in central Texas during 2012–2013.Low-cost side-scan sonar surveys have not typically been used to generate data for riverscape assessments of assemblage structure, thus the secondary objective was to assess the efficacy of this approach.The finest spatial scale (micro-mesohabitat) and the intermediate scale (channel unit) had the greatest explanatory power for variation in fish assemblage structure.Many of the fish endemic to the Edwards Plateau showed similar associations with physicochemical and landscape variables suggesting that conservation and restoration actions targeting a single endemic species may provide benefits to a large proportion of the endemic species in this system.Low-cost side-scan sonar proved to be a cost-effective means of acquiring information on the habitat availability of the entire river length and allowed the assessment of how a full suite of riverscape-level variables influenced local fish assemblage structure.

Lessons learned while integrating habitat, dispersal, disturbance, and life-history traits into species habitat models under climate change

Science.gov (United States)

Louis R. Iverson; Anantha M. Prasad; Stephen N. Matthews; Matthew P. Peters

2011-01-01

We present an approach to modeling potential climate-driven changes in habitat for tree and bird species in the eastern United States. First, we took an empirical-statistical modeling approach, using randomForest, with species abundance data from national inventories combined with soil, climate, and landscape variables, to build abundance-based habitat models for 134...

Combining catchment and instream modelling to assess physical habitat quality

DEFF Research Database (Denmark)

Olsen, Martin

Study objectives After the implementation of EU's Water Framework Directive (WFD) in Denmark ecological impacts from groundwater exploitation on surface waters has to receive additional consideration. Small streams in particular are susceptible to changes in run-off but have only recieved little...... attention in past studies of run-off impact on the quality of stream physical habitats. This study combined catchment and instream models with instream habitat observations to assess the ecological impacts from groundwater exploitation on a small stream. The main objectives of this study was; • to assess...... which factors are controlling the run-off conditions in stream Ledreborg and to what degree • to assess the run-off reference condition of stream Ledreborg where intensive groundwater abstraction has taken place in 67 years using a simple rainfall-run-off-model • to assess how stream run-off affect...

Indicators of streamflow alteration, habitat fragmentation, impervious cover, and water quality for Massachusetts stream basins

Science.gov (United States)

Weiskel, Peter K.; Brandt, Sara L.; DeSimone, Leslie A.; Ostiguy, Lance J.; Archfield, Stacey A.

2010-01-01

Massachusetts streams and stream basins have been subjected to a wide variety of human alterations since colonial times. These alterations include water withdrawals, treated wastewater discharges, construction of onsite septic systems and dams, forest clearing, and urbanization—all of which have the potential to affect streamflow regimes, water quality, and habitat integrity for fish and other aquatic biota. Indicators were developed to characterize these types of potential alteration for subbasins and groundwater contributing areas in Massachusetts. The potential alteration of streamflow by the combined effects of withdrawals and discharges was assessed under two water-use scenarios. Water-use scenario 1 incorporated publicly reported groundwater withdrawals and discharges, direct withdrawals from and discharges to streams, and estimated domestic-well withdrawals and septic-system discharges. Surface-water-reservoir withdrawals were excluded from this scenario. Water-use scenario 2 incorporated all the types of withdrawal and discharge included in scenario 1 as well as withdrawals from surface-water reservoirs—all on a long-term, mean annual basis. All withdrawal and discharge data were previously reported to the State for the 2000–2004 period, except domestic-well withdrawals and septic-system discharges, which were estimated for this study. The majority of the state’s subbasins and groundwater contributing areas were estimated to have relatively minor (less than 10 percent) alteration of streamflow under water-use scenario 1 (seasonally varying water use; no surface-water-reservoir withdrawals). However, about 12 percent of subbasins and groundwater contributing areas were estimated to have extensive alteration of streamflows (greater than 40 percent) in August; most of these basins were concentrated in the outer metropolitan Boston region. Potential surcharging of streamflow in August was most commonly indicated for main-stem river subbasins, although

Grande Ronde Basin Fish Habitat Enhancement Project : 2007 Annual Report.

Energy Technology Data Exchange (ETDEWEB)

McGowan, Vance R.; Morton, Winston H.

2008-12-30

On July 1, 1984 the Bonneville Power Administration and the Oregon Department of Fish and Wildlife entered into an intergovernmental contract to initiate fish habitat enhancement work in the Joseph Creek subbasin of the Grande Ronde River Basin in northeast Oregon. In 1985 the Upper and Middle Grande Ronde River, and Catherine Creek subbasins were included in the contract, and in 1996 the Wallowa River subbasin was added. The primary goal of 'The Grande Ronde Basin Fish Habitat Enhancement Project' is to create, protect, and restore riparian and instream habitat for anadromous salmonids, thereby maximizing opportunities for natural fish production within the basin. This project provided for implementation of Program Measure 703 (C)(1), Action Item 4.2 of the Northwest Power Planning Council's Columbia River Basin Fish and Wildlife Program (NPPC, 1987), and continues to be implemented as offsite mitigation for mainstem fishery losses caused by the Columbia River hydro-electric system. All work conducted by the Oregon Department of Fish and Wildlife and partners is on private lands and therefore requires that considerable time be spent developing rapport with landowners to gain acceptance of, and continued cooperation with this program throughout 10-15 year lease periods. Both passive and active restoration treatment techniques are used. Passive regeneration of habitat, using riparian exclosure fencing and alternate water sources are the primary method to restore degraded streams when restoration can be achieved primarily through changes in management. Active restoration techniques using plantings, bioengineering, site-specific instream structures, or whole stream channel alterations are utilized when streams are more severely degraded and not likely to recover in a reasonable timeframe. Individual projects contribute to and complement ecosystem and basin-wide watershed restoration efforts that are underway by state, federal, and tribal agencies, and

Physical inventory by use of modeling for the tritium aqueous waste recovery system

International Nuclear Information System (INIS)

Sienkiewicz, C.J.; Lentz, J.E.; Wiggins, D.V.

1988-01-01

Physical inventory requirements for the Tritium Aqueous Waste Recovery System (TAWRS) presented constraints that required unique solutions. Available analytical techniques for which sound measurement control practices existed could not be readily adapted to the system without significant modifications and expense. Based on the assumption that would accurately estimate total system inventory given a few key measurements, a model was developed for TAWRS. Tritium concentrations in two streams, the tritiated feed stream to the process and the tritiated hydrogen stream generated by the electrolysis cells, provided the key values to the model. The proposed mathematical model relates the tritium concentration throughout the system to the tritium concentration in these two streams. Testing of the system using low-level tritiated feed water was conducted to characterize tritium distribution in the system and to relate key values to total inventory. 4 refs., 2 figs.,

Effects of land use, stream habitat, and water quality on biological communities of wadeable streams in the Illinois River Basin of Arkansas, 2011 and 2012

Science.gov (United States)

Petersen, James C.; Justus, B.G.; Meredith, Bradley J.

2014-01-01

The Illinois River Basin includes an area of diverse land use in northwestern Arkansas. Land-use data collected in 2006 indicate that most of the land in the basin is agricultural. The agricultural land is used primarily for production of poultry and cattle. Eighteen sites were selected from the list of candidate sites based on drainage area, land use, presence or absence of an upstream wastewater-treatment plant, water quality, and other information gathered during the reconnaissance. An important consideration in the process was to select sites along gradients of forest to urban land use and forest to agricultural land use. Water-quality samples were collected for analysis of nutrients, and a multiparameter field meter was used to measure water temperature, specific conductance, pH, and dissolved oxygen. Streamflow was measured immediately following the water-quality sampling. Macroalgae coverage was estimated and periphyton, macroinvertebrate, and fish communities were sampled at each site. Stream habitat also was assessed. Many types of land-use, water-quality, and habitat factors affected one or more aspects of the biological communities. Several macroinvertebrate and fish metrics changed in response to changes in percent forest; sites that would be considered most disturbed, based on these metrics, are sites with the highest percentages of urban land use in their associated basins. The presence of large mats of macroalgae was one of the most noticeable biological characteristics in several streams within the Illinois River Basin. The highest macroalgae percent cover values were recorded at four sites downstream from wastewater-treatment plants. Macroalgae percent cover was strongly correlated only with bed substrate size, canopy closure, and specific conductance. Periphyton metrics were most often and most strongly correlated with riparian shading, specific conductance, substrate turbidity, percent agriculture, poultry house density, and unpaved road density

Stream hydraulics and temperature determine the metabolism of geothermal Icelandic streams

Directory of Open Access Journals (Sweden)

Demars B. O.L.

2011-07-01

Full Text Available Stream ecosystem metabolism plays a critical role in planetary biogeochemical cycling. Stream benthic habitat complexity and the available surface area for microbes relative to the free-flowing water volume are thought to be important determinants of ecosystem metabolism. Unfortunately, the engineered deepening and straightening of streams for drainage purposes could compromise stream natural services. Stream channel complexity may be quantitatively expressed with hydraulic parameters such as water transient storage, storage residence time, and water spiralling length. The temperature dependence of whole stream ecosystem respiration (ER, gross primary productivity (GPP and net ecosystem production (NEP = GPP − ER has recently been evaluated with a “natural experiment” in Icelandic geothermal streams along a 5–25 °C temperature gradient. There remained, however, a substantial amount of unexplained variability in the statistical models, which may be explained by hydraulic parameters found to be unrelated to temperature. We also specifically tested the additional and predicted synergistic effects of water transient storage and temperature on ER, using novel, more accurate, methods. Both ER and GPP were highly related to water transient storage (or water spiralling length but not to the storage residence time. While there was an additional effect of water transient storage and temperature on ER (r2 = 0.57; P = 0.015, GPP was more related to water transient storage than temperature. The predicted synergistic effect could not be confirmed, most likely due to data limitation. Our interpretation, based on causal statistical modelling, is that the metabolic balance of streams (NEP was primarily determined by the temperature dependence of respiration. Further field and experimental work is required to test the predicted synergistic effect on ER. Meanwhile, since higher metabolic activities allow for higher pollutant degradation or uptake

Grande Ronde Basin Fish Habitat Enhancement Project, Annual Report 2002-2003.

Energy Technology Data Exchange (ETDEWEB)

McGowan, Vance

2003-08-01

On July 1, 1984 the Bonneville Power Administration and the Oregon Department of Fish and Wildlife entered into an agreement to initiate fish habitat enhancement work in the Joseph Creek subbasin of the Grande Ronde River Basin in northeast Oregon. In July of 1985 the Upper and Middle Grande Ronde River, and Catherine Creek subbasins were included in the intergovernmental contract, and on March 1, 1996 the Wallowa River subbasin was added. The primary goal of 'The Grande Ronde Basin Fish Habitat Enhancement Project' is to create, protect, and restore riparian and instream habitat for anadromous salmonids, thereby maximizing opportunities for natural fish production within the basin. This project provided for implementation of Program Measure 703 (C)(1), Action Item 4.2 of the Northwest Power Planning Council's Columbia River Basin Fish and Wildlife Program (NPPC, 1987), and continues to be implemented as offsite mitigation for mainstem fishery losses caused by the Columbia River hydro-electric system. All work conducted by the Oregon Department of Fish and Wildlife is on private lands and therefore requires that considerable time be spent developing rapport with landowners to gain acceptance of, and continued cooperation with this program throughout 10-15 year lease periods. This project calls for passive regeneration of habitat, using riparian exclosure fencing as the primary method to restore degraded streams to a normative condition. Active remediation techniques using plantings, off-site water developments, site-specific instream structures, or whole channel alterations are also utilized where applicable. Individual projects contribute to and complement ecosystem and basin-wide watershed restoration efforts that are underway by state, federal, and tribal agencies, and local watershed councils. Work undertaken during 2002 included: (1) Implementing 1 new fencing project in the Wallowa subbasin that will protect an additional 0.95 miles of stream

Waste Isolation Pilot Plant Transuranic Waste Baseline inventory report. Volume 1. Revision 1

International Nuclear Information System (INIS)

1995-02-01

This document provides baseline inventories of transuranic wastes for the WIPP facility. Information on waste forms, forecasting of future inventories, and waste stream originators is also provided. A diskette is provided which contains the inventory database

Waste Isolation Pilot Plant Transuranic Waste Baseline inventory report. Volume 1. Revision 1

Energy Technology Data Exchange (ETDEWEB)

NONE

1995-02-01

This document provides baseline inventories of transuranic wastes for the WIPP facility. Information on waste forms, forecasting of future inventories, and waste stream originators is also provided. A diskette is provided which contains the inventory database.

Conserving the Connections: A Nationwide Inventory of State-Based Habitat Connectivity Analysis

OpenAIRE

Feinberg, Jesse

2007-01-01

Habitat fragmentation is among the most serious threats to species and biological diversity. Highways can divide wildlife habitat into smaller patches, reducing or prohibiting necessary wildlife movement between core habitat areas for foraging, mating, and other life functions. Defenders of Wildlife reviewed all 50 states to identify those that are working to address habitat connectivity in the context of transportation planning. The goal of these plans is to facilitate interagency c...

VEGETATION BEHAVIOR AND ITS HABITAT REGION AGAINST FLOOD FLOW IN URBAN STREAMS

Directory of Open Access Journals (Sweden)

IL-KI CHOI

2013-06-01

Full Text Available Hydraulic effects on the vegetation behavior and on its habitat region against flood flow in the urban streams were analysed in this paper. Vegetation behavior was classified into stable, recovered, damaged and swept away stages. Criteria between recovered and damaged status were determined by the bending angle of the aquatic plants. Aquatic plants whose bending angle is lower than 30~50 degree is recovered, but they were damaged and cannot be recovered when the bending angle is higher than 30~50 degree. Phragmites japonica was inhabited in the hydraulic condition of high Froude number which shows that it was inhabited in the upstream reaches. Phragmites communis was inhabited in the relatively low Froude number compared with Phragmites japonica. This shows that it was inhabited in the downstream reaches. Persicaria blumei was found in the relatively wide range of flow velocity and flow depth, which shows that it was inhabited in the middle and downstream reaches. Criterion on the vegetation behavior of Persicaria thunbergii was not clear, which implies that it may be affected by the flow turbulence rather than flow velocity and flow depth.

Grande Ronde Basin Fish Habitat Enhancement Project : 2000 Annual Report.

Energy Technology Data Exchange (ETDEWEB)

McGowan, Vance R.; Powell, Russ M.; Stennfeld, Scott P.

2001-04-01

On July 1, 1984 the Bonneville Power Administration and the Oregon Department of Fish and Wildlife entered into an agreement to initiate fish habitat enhancement work in the Joseph Creek subbasin of the Grande Ronde River Basin in northeast Oregon. In July of 1985 the Upper and Middle Grande Ronde River, and Catherine Creek subbasins were included in the intergovernmental contract, and on March 1, 1996 the Wallowa River subbasin was added. The primary goal of ''The Grande Ronde Basin Fish Habitat Enhancement Project'' is to access, create, improve, protect, and restore riparian and instream habitat for anadromous salmonids, thereby maximizing opportunities for natural fish production within the basin. This project provided for implementation of Program Measure 703 (C)(1), Action Item 4.2 of the Northwest Power Planning Council's Columbia River Basin Fish and Wildlife Program (NPPC, 1987), and continues to be implemented as offsite mitigation for mainstem fishery losses caused by the Columbia River hydro-electric system. All work conducted by the Oregon Department of Fish and Wildlife is on private lands and therefore requires that considerable time be spent developing rapport with landowners to gain acceptance of, and continued cooperation with this program throughout 10-15 year lease periods. This project calls for passive regeneration of habitat, using riparian enclosure fencing as the primary method to restore degraded streams to a normative condition. Active remediation techniques using plantings, off-site water developments, site-specific instream structures, or whole channel alterations are also utilized where applicable. Individual projects contribute to and complement ecosystem and basin-wide watershed restoration efforts that are underway by state, federal, and tribal agencies, and local watershed councils. Work undertaken during 2000 included: (1) Implementing 2 new projects in the Grande Ronde drainage, and retrofitting one old

Functional differentiation between fish assemblages from forested and deforested streams

Directory of Open Access Journals (Sweden)

Fabrício Barreto Teresa

Full Text Available We tested the hypothesis that streams in deforested areas shelter different fish communities to nearby forested areas, and that these disparities are due to environmental parameters that limit or benefit different species according to their functional traits. We compared the community composition of three south east Brazilian streams flanked by riparian forest with three nearby streams in deforested areas. The following functional traits were considered: diet, habitat use, water flow preference, size, and hypoxia tolerance. Differentiation between forested and deforested streams corresponded with the different contributions of three functional groups. Species reported in the literature to be hypoxia tolerant, and exhibiting a variable combination of the other traits prevailed in deforested streams, although we did not find substantial differences in oxygen levels between forested and deforested streams. In forested streams, benthic species associated with a high water flow and an insectivorous diet were dominant. Changes in streams induced by deforestation which are associated with habitat availability, food resources, and physicochemical conditions appear to restrict the occurrence of specialized species and instead benefit tolerant generalists.

Interactive effects of temperature and habitat complexity on freshwater communities.

Science.gov (United States)

Scrine, Jennifer; Jochum, Malte; Ólafsson, Jón S; O'Gorman, Eoin J

2017-11-01

Warming can lead to increased growth of plants or algae at the base of the food web, which may increase the overall complexity of habitat available for other organisms. Temperature and habitat complexity have both been shown to alter the structure and functioning of communities, but they may also have interactive effects, for example, if the shade provided by additional habitat negates the positive effect of temperature on understory plant or algal growth. This study explored the interactive effects of these two major environmental factors in a manipulative field experiment, by assessing changes in ecosystem functioning (primary production and decomposition) and community structure in the presence and absence of artificial plants along a natural stream temperature gradient of 5-18°C. There was no effect of temperature or habitat complexity on benthic primary production, but epiphytic production increased with temperature in the more complex habitat. Cellulose decomposition rate increased with temperature, but was unaffected by habitat complexity. Macroinvertebrate communities were less similar to each other as temperature increased, while habitat complexity only altered community composition in the coldest streams. There was also an overall increase in macroinvertebrate abundance, body mass, and biomass in the warmest streams, driven by increasing dominance of snails and blackfly larvae. Presence of habitat complexity, however, dampened the strength of this temperature effect on the abundance of macroinvertebrates in the benthos. The interactive effects that were observed suggest that habitat complexity can modify the effects of temperature on important ecosystem functions and community structure, which may alter energy flow through the food web. Given that warming is likely to increase habitat complexity, particularly at higher latitudes, more studies should investigate these two major environmental factors in combination to improve our ability to predict the

Habitat capacity for Sacramento delta - Life Cycle Modeling of Life History Diversity and Habitat Relationships

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — The goals of this project are to examine 1) the relative importance of multiple aquatic habitats (streams, estuaries, and nearshore areas, for example) used by...

Red River Stream Improvement Final Design Nez Perce National Forest.

Energy Technology Data Exchange (ETDEWEB)

Watershed Consulting, LLC

2007-03-15

This report details the final stream improvement design along the reach of Red River between the bridge below Dawson Creek, upstream for approximately 2 miles, Idaho County, Idaho. Geomorphic mapping, hydrologic profiles and cross-sections were presented along with existing fish habitat maps in the conceptual design report. This information is used to develop a stream improvement design intended to improve aquatic habitat and restore riparian health in the reach. The area was placer mined using large bucket dredges between 1938 and 1957. This activity removed most of the riparian vegetation in the stream corridor and obliterated the channel bed and banks. The reach was also cut-off from most valley margin tributaries. In the 50 years since large-scale dredging ceased, the channel has been re-established and parts of the riparian zone have grown in. However, the recruitment of large woody debris to the stream has been extremely low and overhead cover is poor. Pool habitat makes up more than 37% of the reach, and habitat diversity is much better than the project reach on Crooked River. There is little large woody debris in the stream to provide cover for spawning and juvenile rearing, because the majority of the woody debris does not span a significant part of the channel, but is mainly on the side slopes of the stream. Most of the riparian zone has very little soil or subsoil left after the mining and so now consists primarily of unconsolidated cobble tailings or heavily compacted gravel tailings. Knapweed and lodgepole pine are the most successful colonizers of these post mining landforms. Tributary fans which add complexity to many other streams in the region, have been isolated from the main reach due to placer mining and road building.

Influences of forest and rangeland management on salmonid fishes and their habitats

National Research Council Canada - National Science Library

Meehan, William R

1991-01-01

Contents : Stream ecosystems - Salmonid distributions and life histories - Habitat requirements of salmonids in streams - Natural processes - Timber harvesting, silvicultrue and watershed processes - Forest...

Habitat sequencing and the importance of discharge in inferences

Science.gov (United States)

Robert H. Hilderbrand; A. Dennis Lemly; C. Andrew Dolloff

1999-01-01

The authors constructed stream maps for a low-­gradient trout stream in southwestern Virginia during autumn (base flow) and spring (elevated flows) to compare spatial and temporal variation in stream habitats. Pool-riffle sequencing and total area occupied by pools and riffles changed substantially depending on the level of discharge: reduced discharge resulted in an...

Mapping spatial and temporal variation of stream water temperature in the upper Esopus Creek watershed

Science.gov (United States)

Chien, H.; McGlinn, L.

2017-12-01

The upper Esopus Creek and its tributary streams located in the Catskill Mountain region of New York State provide habitats for cold-adapted aquatic species. However, ongoing global warming may change the stream water temperature within a watershed and disturb the persistence of coldwater habitats. Characterizing thermal regimes within the upper Esopus Creek watershed is important to provide information of thermally suitable habitats for aquatic species. The objectives of this study are to measure stream water temperature and map thermal variability among tributaries to the Esopus Creek and within Esopus Creek. These objectives will be achieved by measuring stream water temperature for at least two years. More than 100 water temperature data loggers have been placed in the upper Esopus Creek and their tributaries to collect 30-minute interval water temperatures. With the measured water temperature, we will use spatial interpolation in ArcGIS to create weekly and monthly water temperature surface maps to evaluate the thermal variation over time and space within the upper Esopus Creek watershed. We will characterize responsiveness of water temperature in tributary streams to air temperature as well. This information of spatial and temporal variation of stream water temperature will assist stream managers with prioritizing management practices that maintain or enhance connectivity of thermally suitable habitats in high priority areas.

Wildfire may increase habitat quality for spring Chinook salmon in the Wenatchee River subbasin, WA, USA

Science.gov (United States)

Flitcroft, Rebecca L; Falke, Jeffrey A.; Reeves, Gordon H.; Hessburg, Paul F.; McNyset, Kris M.; Benda, Lee E.

2016-01-01

Pacific Northwest salmonids are adapted to natural disturbance regimes that create dynamic habitat patterns over space and through time. However, human land use, particularly long-term fire suppression, has altered the intensity and frequency of wildfire in forested upland and riparian areas. To examine the potential impacts of wildfire on aquatic systems, we developed stream-reach-scale models of freshwater habitat for three life stages (adult, egg/fry, and juvenile) of spring Chinook salmon (Oncorhynchus tshawytscha) in the Wenatchee River subbasin, Washington. We used variables representing pre- and post-fire habitat conditions and employed novel techniques to capture changes in in-stream fine sediment, wood, and water temperature. Watershed-scale comparisons of high-quality habitat for each life stage of spring Chinook salmon habitat suggested that there are smaller quantities of high-quality juvenile overwinter habitat as compared to habitat for other life stages. We found that wildfire has the potential to increase quality of adult and overwintering juvenile habitat through increased delivery of wood, while decreasing the quality of egg and fry habitat due to the introduction of fine sediments. Model results showed the largest effect of fire on habitat quality associated with the juvenile life stage, resulting in increases in high-quality habitat in all watersheds. Due to the limited availability of pre-fire high-quality juvenile habitat, and increased habitat quality for this life stage post-fire, occurrence of characteristic wildfires would likely create a positive effect on spring Chinook salmon habitat in the Wenatchee River subbasin. We also compared pre- and post-fire model results of freshwater habitat for each life stage, and for the geometric mean of habitat quality across all life stages, using current compared to the historic distribution of spring Chinook salmon. We found that spring Chinook salmon are currently distributed in stream channels in

New methods for modeling stream temperature using high resolution LiDAR, solar radiation analysis and flow accumulated values to predict stream temperature

Science.gov (United States)

In-stream temperature directly effects a variety of biotic organisms, communities and processes. Changes in stream temperature can render formally suitable habitat unsuitable for aquatic organisms, particularly native cold water species that are not able to adjust. In order to...

Soil Microbial Community Contribution to Small Headwater Stream Metabolism.

Science.gov (United States)

Clapcott, J. E.; Gooderham, J. P.; Barmuta, L. A.; Davies, P. E.

2005-05-01

The temporal dynamics of sediment respiration were examined in seven small headwater streams in forested catchments in 2004. A strong seasonal response was observed with higher respiration rates in depositional zones than in gravel runs. The data were also examined in the context of proportional habitat distributions that highlighted the importance of high flow events in shaping whole stream metabolic budgets. This study specifically examines the question of terrestrial soil respiration contribution to whole stream metabolism by the controlled inundation of terrestrial soils. The experiment included six experimentally inundated terrestrial zones, six terrestrial controls, and six in-stream depositional zones. Sediment bacterial respiration was measured using 14C leucine incorporation and cotton strip bioassays were also employed to provide an indicative measure of sediment microbial activity. Despite high variability and exhibiting significantly lower bacterial activity than in-stream sediments, modelling using flow data and habitat mapping illustrated the important contribution of terrestrial soil respiration to the whole stream metabolic budgets of small headwater streams. In addition, microbial community composition examined using phospholipid fatty acid analysis clearly differentiated between terrestrial and aquatic communities. Freshly inundated terrestrial communities remained similar to un-inundated controls after 28 days.

Habitat use and demography of Mus musculus in a rural landscape of Argentina.

Science.gov (United States)

León, Vanina A; Fraschina, Jimena; Guidobono, Juan S; Busch, Maria

2013-04-01

The main goal of the paper was to determine the habitat distribution of the house mouse (Mus musculus) within a rural landscape of Buenos Aires province, Argentina. We also studied the seasonal variation in abundance and reproductive activity. The habitats studied were poultry farms, human houses in a small village, cropfields, pastures, cropfield and pasture edges, riparian habitats (streams), railway embankments and woodlots. We captured 817 M. musculus and 690 individuals of 5 native rodent species. M. musculus was captured in poultry farms, houses, riparian habitats, cropfield and borders, but it showed a significantly higher abundance in poultry farms compared to the other habitats. Its presence outside poultry farms was significantly related to the distance to streams and poultry farms. The mean trapping success index of M. musculus did not show significant variations between periods, but the proportion of active males was significantly higher in the spring-summer period than in the autumn-winter period. All captures of M. musculus in cropfields, borders and riparian habitats occurred in the spring-summer period. The capture of M. musculus in many types of habitats suggests that it can disperse outside poultry farms, and streams may be used as corridors. © 2012 Wiley Publishing Asia Pty Ltd, ISZS and IOZ/CAS.

Scale-dependent seasonal pool habitat use by sympatric Wild Brook Trout and Brown Trout populations

Science.gov (United States)

Davis, Lori A.; Wagner, Tyler

2016-01-01

Sympatric populations of native Brook Trout Salvelinus fontinalis and naturalized Brown Trout Salmo truttaexist throughout the eastern USA. An understanding of habitat use by sympatric populations is of importance for fisheries management agencies because of the close association between habitat and population dynamics. Moreover, habitat use by stream-dwelling salmonids may be further complicated by several factors, including the potential for fish to display scale-dependent habitat use. Discrete-choice models were used to (1) evaluate fall and early winter daytime habitat use by sympatric Brook Trout and Brown Trout populations based on available residual pool habitat within a stream network and (2) assess the sensitivity of inferred habitat use to changes in the spatial scale of the assumed available habitat. Trout exhibited an overall preference for pool habitats over nonpool habitats; however, the use of pools was nonlinear over time. Brook Trout displayed a greater preference for deep residual pool habitats than for shallow pool and nonpool habitats, whereas Brown Trout selected for all pool habitat categories similarly. Habitat use by both species was found to be scale dependent. At the smallest spatial scale (50 m), habitat use was primarily related to the time of year and fish weight. However, at larger spatial scales (250 and 450 m), habitat use varied over time according to the study stream in which a fish was located. Scale-dependent relationships in seasonal habitat use by Brook Trout and Brown Trout highlight the importance of considering scale when attempting to make inferences about habitat use; fisheries managers may want to consider identifying the appropriate spatial scale when devising actions to restore and protect Brook Trout populations and their habitats.

Patterns at Multi-Spatial Scales on Tropical Island Stream Insect Assemblages: Gorgona Island Natural National Park, Colombia, Tropical Eastern Pacific

Directory of Open Access Journals (Sweden)

Magnolia Longo

2014-02-01

Full Text Available Tropical Eastern Pacific island streams (TEPis differ from other neotropical streams in their rainy climate, mixed sedimentary-volcanic geology and faunal composition. Yet, their relationships between environmental characteristics and stream biota remain unexplored. We analyzed the environmental subject at three spatial scales using a fully nested sampling design (6 streams, 2 reaches within each stream, 2 habitats within each reach, and 4 replicates per habitat on Gorgona Island (Colombia. Sampling was carried out in two months with contrasting rainfall during early 2009. We studied the spatial variation of assemblage composition and density along with 27 independent variables within two contrasting rainfall conditions. Five stream-scale variables, two reach-scale variables, and five habitat-scale variables were selected using a Canonical Correspondence Analysis (CCA. A partial CCA showed that the total variance explained was 13.98%, while stream- and habitat-scale variables explained the highest proportion of the variance (5.74 and 5.01%, respectively. Dissolved oxygen (as affected by rainfall, high-density use zone (a management category, and sedimentary geology were the best descriptors of insect assemblages. The two latter descriptors affected fine-scale variables such as total benthic organic matter and gravel substratum, respectively. A Nested ANOVA showed significant differences in total density and richness among streams and habitats, and significant differences between the two sampling months regardless of the spatial scale. The evenness showed a significant stream- and habitat-dependent temporal variability. These results suggested that rainfall regime in Gorgona Island might be a driver of insect assemblage dynamics mediated by water chemistry and substratum properties. Spatial assemblage variability here is greater within habitats (among samples, and a minor fraction occurs at habitat- and stream-scales, while no longitudinal

1998 BPA habitat projects completed within the Asotin Creek Watershed, WA; Ridge-Top to Ridge-Top Habitat Projects; 1998 BPA Completion Report - November 1999

International Nuclear Information System (INIS)

Johnson, Bradley J.

2000-01-01

The Asotin Creek Model Watershed Program (ACMWP) is the primary entity coordinating habitat projects on both private and public lands within the Asotin Creek watershed. The Asotin Creek watershed covers approximately 325 square miles in the Blue Mountains of southeastern Washington. Snake River spring chinook salmon, summer steelhead and bull trout, which are listed under the Endangered Species Act (ESA), are present in the watershed. The ACMWP began coordinating habitat projects in 1995. Approximately two hundred forty-six projects have been implemented through the ACMWP as of 1998. Fifty-nine of these projects were funded in part through Bonneville Power Administration's 1998 Columbia Basin Fish and Wildlife Program. These projects used a variety of methods to enhance and protect watershed conditions. In-stream work for fish habitat included construction of hard structures (e.g. vortex rock weirs), meander reconstruction, placement of large woody debris (LWD) and whole trees and improvements to off-channel rearing habitat; one hundred thirty-nine pools were created with these structures. Three miles of stream benefited from riparian improvements such as fencing, vegetative plantings, and noxious weed control. Two alternative water developments were completed, providing off-stream-watering sources for livestock. 20,500 ft of upland terrace construction, seven sediment basin construction, one hundred eighty-seven acres of grass seeding, eight hundred fifty acres of direct seeding and eighteen sediment basin cleanouts were implemented to reduce sediment production and delivery to streams in the watershed

LAND USE IMPACTS ON STREAM BED SUBSTRATE MODERATED BY GEOLOGY IN THE JOHN DAY BASIN, OREGON

Science.gov (United States)

Human land uses and land cover modifications (e.g., logging, agriculture, roads) can alter runoff and increase sediment supply to streams, potentially degrading aquatic habitat for benthic organisms and fish. This study used synoptic stream habitat survey data from a regional as...

Sorbitol-fermenting Bifidobacteria are indicators of very recent human faecal pollution in streams and groundwater habitats in urban tropical lowlands

Science.gov (United States)

2010-01-01

Sorbitol-fermenting Bifidobacteria (SFB) proved to be an excellent indicator of very recent human faecal pollution (hours to days) in the investigated tropical stream and groundwater habitats. SFB were recovered from human faeces and sources potentially contaminated with human excreta. SFB were undetectable in animal faeces and environmental samples not contaminated with human faeces. Microcosm studies demonstrated a rapid die-off rate in groundwater (T90 value 0.6 days) and stream water (T90 value 0.9–1.7 days). Discrimination sensitivity analysis, including E. coli, faecal coliforms, total coliforms and Clostridium perfringens spores, revealed high ability of SFB to distinguish differing levels of faecal pollution especially for streams although high background levels of interfering bacteria can complicate its recovery on the used medium. Due to its faster die-off, as compared to many waterborne pathogens, SFB cannot replace microbiological standard parameters for routine water quality monitoring but it is highly recommendable as a specific and complementary tool when human faecal pollution has to be localized or verified. Because of its exclusive faecal origin and human specificity it seems also worthwhile to include SFB in future risk evaluation studies at tropical water resources in order to evaluate under which situations risks of infection may be indicated. PMID:20375476

Confederated Tribes Umatilla Indian Reservation (CTUIR) Umatilla Anadromous Fisheries Habitat Project : A Columbia River Basin Fish Habitat Project : Annual Report Fiscal Year 2007.

Energy Technology Data Exchange (ETDEWEB)

Hoverson, Eric D.; Amonette, Alexandra

2008-12-02

The Umatilla Anadromous Fisheries Habitat Project (UAFHP) is an ongoing effort to protect, enhance, and restore riparian and instream habitat for the natural production of anadromous salmonids in the Umatilla River Basin, Northeast Oregon. Flow quantity, water temperature, passage, and lack of in-stream channel complexity have been identified as the key limiting factors in the basin. During the 2007 Fiscal Year (FY) reporting period (February 1, 2007-January 31, 2008) primary project activities focused on improving instream and riparian habitat complexity, migrational passage, and restoring natural channel morphology and floodplain function. Eight fisheries habitat enhancement projects were implemented on Meacham Creek, Camp Creek, Greasewood Creek, Birch Creek, West Birch Creek, and the Umatilla River. Specific restoration actions included: (1) rectifying five fish passage barriers on four creeks, (2) planting 1,275 saplings and seeding 130 pounds of native grasses, (3) constructing two miles of riparian fencing for livestock exclusion, (4) coordinating activities related to the installation of two off-channel, solar-powered watering areas for livestock, and (5) developing eight water gap access sites to reduce impacts from livestock. Baseline and ongoing monitoring and evaluation activities were also completed on major project areas such as conducting photo point monitoring strategies activities at the Meacham Creek Large Wood Implementation Project site (FY2006) and at all existing easements and planned project sites. Fish surveys and aquatic habitat inventories were conducted at project sites prior to implementation. Monitoring plans will continue throughout the life of each project to oversee progression and inspire timely managerial actions. Twenty-seven conservation easements were maintained with 23 landowners. Permitting applications for planned project activities and biological opinions were written and approved. Project activities were based on a variety

The Midwest Stream Quality Assessment—Influences of human activities on streams

Science.gov (United States)

Van Metre, Peter C.; Mahler, Barbara J.; Carlisle, Daren M.; Coles, James F.

2018-04-16

Healthy streams and the fish and other organisms that live in them contribute to our quality of life. Extensive modification of the landscape in the Midwestern United States, however, has profoundly affected the condition of streams. Row crops and pavement have replaced grasslands and woodlands, streams have been straightened, and wetlands and fields have been drained. Runoff from agricultural and urban land brings sediment and chemicals to streams. What is the chemical, physical, and biological condition of Midwestern streams? Which physical and chemical stressors are adversely affecting biological communities, what are their origins, and how might we lessen or avoid their adverse effects?In 2013, the U.S. Geological Survey (USGS) conducted the Midwest Stream Quality Assessment to evaluate how human activities affect the biological condition of Midwestern streams. In collaboration with the U.S. Environmental Protection Agency National Rivers and Streams Assessment, the USGS sampled 100 streams, chosen to be representative of the different types of watersheds in the region. Biological condition was evaluated based on the number and diversity of fish, algae, and invertebrates in the streams. Changes to the physical habitat and chemical characteristics of the streams—“stressors”—were assessed, and their relation to landscape factors and biological condition was explored by using mathematical models. The data and models help us to better understand how the human activities on the landscape are affecting streams in the region.

Accuracy and Optimal Altitude for Physical Habitat Assessment (PHA of Stream Environments Using Unmanned Aerial Vehicles (UAV

Directory of Open Access Journals (Sweden)

Ângela Maria Klein Hentz

2018-05-01

Full Text Available Physical Habitat Assessments (PHA are useful to characterize and monitor stream and river habitat conditions, but can be costly and time-consuming. Alternative methods for data collection are getting attention, such as Unmanned Aerial Vehicles (UAV. The objective of this work was to evaluate the accuracy of UAV-based remote sensing techniques relative to ground-based PHA measurements, and to determine the influence of flight altitude on those accuracies. A UAV quadcopter equipped with an RGB camera was flown at the altitudes of 30.5 m, 61.0 m, 91.5 m and 122.0 m, and the metrics wetted width (Ww, bankfull width (Wbf and distance to water (Dw were compared to field PHA. The UAV-PHA method generated similar values to observed PHA values, but underestimated distance to water, and overestimated wetted width. Bankfull width provided the largest RMSE (25–28%. No systematic error patterns were observed considering the different flight altitudes, and results indicated that all flight altitudes investigated can be reliably used for PHA measurements. However, UAV flight at 61 m provided the most accurate results (CI = 0.05 considering all metrics. All UAV parameters over all altitudes showed significant correlation with observed PHA data, validating the use of UAV-based remote sensing for PHA.

Comparison of active and passive stream restoration

DEFF Research Database (Denmark)

Kristensen, Esben Astrup; Thodsen, Hans; Dehli, Bjarke

2013-01-01

Modification and channelization of streams and rivers have been conducted extensively throughout the world during the past century. Subsequently, much effort has been directed at re-creating the lost habitats and thereby improving living conditions for aquatic organisms. However, as restoration...... methods are plentiful, it is difficult to determine which one to use to get the anticipated result. The aim of this study was to compare two commonly used methods in small Danish streams to improve the physical condition: re-meandering and passive restoration through cease of maintenance. Our...... investigation included measurement of the physical conditions in 29 stream reaches covering four different groups: (1) re-meandered streams, (2) LDC streams (the least disturbed streams available), (3) passively restored streams (>10 years stop of aintenance) and (4) channelized and non-restored streams. The in...

Soil plutonium and cesium in stream channels and banks of Los Alamos liquid effluent-receiving areas

International Nuclear Information System (INIS)

Nyhan, J.W.; White, G.C.; Trujillo, G.

1982-01-01

Stream channel sediments and adjacent bank soils found in three intermittent streams used for treated liquid effluent disposal at Los Alamos, New Mexico were sampled to determine the distribution of 238 Pu, sup(239,240)Pu and 137 Cs. Radionuclide concentrations and inventories were determined as functions of distance downstream from the waste outfall and from the center of the stream channel, soil sampling depth, stream channel-bank physiography, and the waste use history of each disposal area. Radionuclide concentrations in channel sediments were inversely related to distances up to 10 km downstream from the outfalls. For sites receiving appreciable waste effluent additions, contaminant concentrations in bank soils decreased with perpendicular distances greater than 0.38 m from the stream channel, and with stream bank sampling depths greater than 20-40 cm. Concentrations and total inventories of radionuclides in stream bank soils generally decreased as stream bank height increased. Inventory estimates of radionuclides in channel sediments exhibited coefficients of variation that ranged 0.41-2.6, reflecting the large variation in radionuclide concentrations at each site. Several interesting temporal relationships of these radionuclides in intermittent streams were gleaned from the varying waste use histories of the three effluent-receiving areas. Eleven years after liquid wastes were added to one canyon, the major radionuclide inventories were found in the stream bank soils, unlike most of the other currently-used receiving areas. A period of time greater than 6 yr seems to be required before the plutonium in liquid wastes currently added to the canyon is approximately equilibrated with the plutonium in the bank soils. These observations are discussed relative to waste management practices in these southwestern intermittent streams. (author)

Soil plutonium and cesium in stream channels and banks of Los Alamos liquid effluent-receiving areas.

Science.gov (United States)

Nyhan, J W; White, G C; Trujillo, G

1982-10-01

Stream channel sediments and adjacent bank soils found in three intermittent streams used for treated liquid effluent disposal at Los Alamos, New Mexico were sampled to determine the distribution of 238Pu, 239,240Pu and 137Cs. Radionuclide concentrations and inventories were determined as functions of distance downstream from the waste outfall and from the center of the stream channel, soil sampling depth, stream channel-bank physiography, and the waste use history of each disposal area. Radionuclide concentrations in channel sediments were inversely related to distances up to 10 km downstream from the outfalls. For sites receiving appreciable waste effluent additions, contaminant concentrations in bank soils decreased with perpendicular distances greater than 0.38 m from the stream channel, and with stream bank sampling depths greater than 20-40 cm. Concentrations and total inventories of radionuclides in stream bank soils generally decreased as stream bank height increased. Inventory estimates of radionuclides in channel sediments exhibited coefficients of variation that ranged 0.41-2.6, reflecting the large variation in radionuclide concentrations at each site. Several interesting temporal relationships of these radionuclides in intermittent streams were gleaned from the varying waste use histories of the three effluent-receiving areas. Eleven yr after liquid wastes were added to one canyon, the major radionuclide inventories were found in the stream bank soils, unlike most of the other currently-used receiving areas. A period of time greater than 6 yr seems to be required before the plutonium in liquid wastes currently added to the canyon is approximately equilibrated with the plutonium in the bank soils. These observations are discussed relative to waste management practices in these southwestern intermittent streams.

Instream flow assessment of streams draining the Arbuckle-Simpson Aquifer

Science.gov (United States)

Seilheimer, Titus S.; Fisher, William L.

2008-01-01

The availability of high quality water is critical to both humans and ecosystems. A recent proposal was made by rapidly expanding municipalities in central Oklahoma to begin transferring groundwater from the Arbuckle-Simpson aquifer, a sensitive sole-source aquifer in south-central Oklahoma. Concerned citizens and municipalities living on and getting their drinking water from the Arbuckle-Simpson lobbied the legislature to pass a temporary moratorium on groundwater transfer to allow for a comprehensive study of the aquifer and its ecosystems. We conducted an instream flow assessment using Physical Habitat Simulation (PHABSIM) on springs and streams with four spring-dependent species: two minnows, southern redbelly dace (Phoxinus erthyrogaster) and redspot chub (Nocomis asper); and two darters, least darter (Etheostoma microperca) and orangethroat darter (Etheostoma spectabile). Spring habitats are unique compared to other river habitats because they have constant flow and temperature, small and isolated habitat patches, and a general lack of predators. Our study sites included two spring-fed streams, one larger stream with high groundwater inputs, and a river with both groundwater and surface water inputs that is adjacent to the small spring-fed streams. These habitats meet the criteria for groundwater dependent ecosystems because they would not exist without the surface expression of groundwater. A total of 99 transects in all four sites were surveyed for channel elevation, and three sets of water surface elevation and water velocity were measured. Habitat suitability criteria were derived for the species at each site using nonparametric confidence limits based on underwater observations made by snorkelers. Simulations of flow were focused on declines in discharge, which is the expected effect of the proposed groundwater diversion. Our results show that only a small proportion of the total available area in each habitat is considered to be preferred habitat

Quantifying structural physical habitat attributes using LIDAR and hyperspectral imagery - PRK

Science.gov (United States)

Structural physical habitat attributes include indices of stream size, channel gradient, substrate size, habitat complexity, and riparian vegetation cover and structure. The Environmental Monitoring and Assessment Program (EMAP) is designed to assess the status and trends of ecol...

Effects of habitat features on size-biased predation on salmon by bears.

Science.gov (United States)

Andersson, Luke C; Reynolds, John D

2017-05-01

Predators can drive trait divergence among populations of prey by imposing differential selection on prey traits. Habitat characteristics can mediate predator selectivity by providing refuge for prey. We quantified the effects of stream characteristics on biases in the sizes of spawning salmon caught by bears (Ursus arctos and U. americanus) on the central coast of British Columbia, Canada by measuring size-biased predation on spawning chum (Oncorhynchus keta) and pink (O. gorbuscha) salmon in 12 streams with varying habitat characteristics. We tested the hypotheses that bears would catch larger than average salmon (size-biased predation) and that this bias toward larger fish would be higher in streams that provide less protection to spawning salmon from predation (e.g., less pools, wood, undercut banks). We then we tested for how such size biases in turn translate into differences among populations in the sizes of the fish. Bears caught larger-than-average salmon as the spawning season progressed and as predicted, this was most pronounced in streams with fewer refugia for the fish (i.e., wood and undercut banks). Salmon were marginally smaller in streams with more pronounced size-biased predation but this predictor was less reliable than physical characteristics of streams, with larger fish in wider, deeper streams. These results support the hypothesis that selective forces imposed by predators can be mediated by habitat characteristics, with potential consequences for physical traits of prey.

The Gulf Stream frontal system: A key oceanographic feature in the habitat selection of the leatherback turtle?

Science.gov (United States)

Chambault, Philippine; Roquet, Fabien; Benhamou, Simon; Baudena, Alberto; Pauthenet, Etienne; de Thoisy, Benoît; Bonola, Marc; Dos Reis, Virginie; Crasson, Rodrigue; Brucker, Mathieu; Le Maho, Yvon; Chevallier, Damien

2017-05-01

Although some associations between the leatherback turtle Dermochelys coriacea and the Gulf Stream current have been previously suggested, no study has to date demonstrated strong affinities between leatherback movements and this particular frontal system using thorough oceanographic data in both the horizontal and vertical dimensions. The importance of the Gulf Stream frontal system in the selection of high residence time (HRT) areas by the North Atlantic leatherback turtle is assessed here for the first time using state-of-the-art ocean reanalysis products. Ten adult females from the Eastern French Guianese rookery were satellite tracked during post-nesting migration to relate (1) their horizontal movements to physical gradients (Sea Surface Temperature (SST), Sea Surface Height (SSH) and filaments) and biological variables (micronekton and chlorophyll a), and (2) their diving behaviour to vertical structures within the water column (mixed layer, thermocline, halocline and nutricline). All the turtles migrated northward towards the Gulf Stream north wall. Although their HRT areas were geographically remote (spread between 80-30 °W and 28-45 °N), all the turtles targeted similar habitats in terms of physical structures, i.e. strong gradients of SST, SSH and a deep mixed layer. This close association with the Gulf Stream frontal system highlights the first substantial synchronization ever observed in this species, as the HRTs were observed in close match with the autumn phytoplankton bloom. Turtles remained within the enriched mixed layer at depths of 38.5±7.9 m when diving in HRT areas, likely to have an easier access to their prey and maximize therefore the energy gain. These depths were shallow in comparison to those attained within the thermocline (82.4±5.6 m) while crossing the nutrient-poor subtropical gyre, probably to reach cooler temperatures and save energy during the transit. In a context of climate change, anticipating the evolution of such frontal

Moving Targets and Biodiversity Offsets for Endangered Species Habitat: Is Lesser Prairie Chicken Habitat a Stock or Flow?

Directory of Open Access Journals (Sweden)

Todd K. BenDor

2014-03-01

Full Text Available The US Fish and Wildlife Service will make an Endangered Species Act listing decision for the lesser prairie chicken (Tympanuchus pallidicinctus; “LPC” in March 2014. Based on the findings of a single, Uzbek antelope study, conservation plans put forth for the LPC propose to modify and re-position habitat in the landscape through a series of temporary preservation/restoration efforts. We argue that for certain species, including the LPC, dynamic habitat offsets represent a dangerous re-interpretation of habitat provision and recovery programs, which have nearly-universally viewed ecosystem offsets (habitat, wetlands, streams, etc. as “stocks” that accumulate characteristics over time. Any effort to create a program of temporary, moving habitat offsets must consider species’ (1 life history characteristics, (2 behavioral tendencies (e.g., avoidance of impacted areas, nesting/breeding site fidelity, and (3 habitat restoration characteristics, including long temporal lags in reoccupation. If misapplied, species recovery programs using temporary, moving habitat risk further population declines.

Fish habitat regression under water scarcity scenarios in the Douro River basin

Science.gov (United States)

Segurado, Pedro; Jauch, Eduardo; Neves, Ramiro; Ferreira, Teresa

2015-04-01

Climate change will predictably alter hydrological patterns and processes at the catchment scale, with impacts on habitat conditions for fish. The main goals of this study are to identify the stream reaches that will undergo more pronounced flow reduction under different climate change scenarios and to assess which fish species will be more affected by the consequent regression of suitable habitats. The interplay between changes in flow and temperature and the presence of transversal artificial obstacles (dams and weirs) is analysed. The results will contribute to river management and impact mitigation actions under climate change. This study was carried out in the Tâmega catchment of the Douro basin. A set of 29 Hydrological, climatic, and hydrogeomorphological variables were modelled using a water modelling system (MOHID), based on meteorological data recorded monthly between 2008 and 2014. The same variables were modelled considering future climate change scenarios. The resulting variables were used in empirical habitat models of a set of key species (brown trout Salmo trutta fario, barbell Barbus bocagei, and nase Pseudochondrostoma duriense) using boosted regression trees. The stream segments between tributaries were used as spatial sampling units. Models were developed for the whole Douro basin using 401 fish sampling sites, although the modelled probabilities of species occurrence for each stream segment were predicted only for the Tâmega catchment. These probabilities of occurrence were used to classify stream segments into suitable and unsuitable habitat for each fish species, considering the future climate change scenario. The stream reaches that were predicted to undergo longer flow interruptions were identified and crossed with the resulting predictive maps of habitat suitability to compute the total area of habitat loss per species. Among the target species, the brown trout was predicted to be the most sensitive to habitat regression due to the

Using Geomorphic Change Detection to Understand Restoration Project Success Relative to Stream Size

Science.gov (United States)

Yeager, A.; Segura, C.

2017-12-01

Large wood (LW) jams have long been utilized as a stream restoration strategy to create fish habitat, with a strong focus on Coho salmon in the Pacific Northwest. These projects continue to be implemented despite limited understanding of their success in streams of different size. In this study, we assessed the changes triggered by LW introductions in 10 alluvial plane bed reaches with varying drainage areas (3.9-22 km²) and bankfull widths (6.4-14.7 m) in one Oregon Coast Range basin. In this basin, LW was added in an effort to improve winter rearing habitat for Coho salmon. We used detailed topographic mapping (0.5 m² resolution) to describe the local stream and floodplain geometry. Pebble counts were used to monitor changes in average substrate size after the LW addition. Field surveys were conducted immediately after the LW were installed, in the summer of 2016, and one year after installation, in the summer of 2017. We used geomorphic change detection analysis to quantify the amount of scour and deposition at each site along with changes in average bankfull width. Then we determined the relative amount of change among all sites to identify which size stream changed the most. We also modeled fluctuations in water surface elevation at each site, correlating frequency and inundation of the LW with geomorphic changes detected from the topographic surveys. Preliminary results show an increase in channel width and floodplain connectivity at all sites, indicating an increase in off-channel habitat for juvenile Coho salmon. Bankfull widths increased up to 75% in small sites and up to 25% in large sites. Median grain size became coarser in large streams (increased up to 20%), while we saw a similar amount of fining at smaller sites. The overall increase in channel width is compensated by an overall decrease in bed elevation at both large and small sites, suggesting the maintenance of overall geomorphic equilibrium. Further work will include quantifying these

E. coli Surface Properties Differ between Stream Water and Sediment Environments

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Xiao Liang

2016-11-01

Full Text Available The importance of E. coli as an indicator organism in fresh water has led to numerous studies focusing on cell properties and transport behavior. However, previous studies have been unable to assess if differences in E. coli cell surface properties and genomic variation are associated with different environmental habitats. In this study, we investigated the variation in characteristics of E. coli obtained from stream water and stream bottom sediments. Cell properties were measured for 77 genomically different E. coli strains (44 strains isolated from sediments and 33 strains isolated from water under common stream conditions in the Upper Midwestern United States: pH 8.0, ionic strength 10mM and 22˚C. Measured cell properties include hydrophobicity, zeta potential, net charge, total acidity and extracellular polymeric substance (EPS composition. Our results indicate that stream sediment E. coli had significantly greater hydrophobicity, greater EPS protein content and EPS sugar content, less negative net charge, and higher point of zero charge than stream water E. coli. A significant positive correlation was observed between hydrophobicity and EPS protein for stream sediment E. coli but not for stream water E. coli. Additionally, E. coli surviving in the same habitat tended to have significantly larger (GTG5 genome similarity. After accounting for the intrinsic impact from the genome, environmental habitat was determined to be a factor influencing some cell surface properties, such as hydrophobicity. The diversity of cell properties and its resulting impact on particle interactions should be considered for environmental fate and transport modeling of aquatic indicator organisms such as E. coli.

E. coli Surface Properties Differ between Stream Water and Sediment Environments.

Science.gov (United States)

Liang, Xiao; Liao, Chunyu; Thompson, Michael L; Soupir, Michelle L; Jarboe, Laura R; Dixon, Philip M

2016-01-01

The importance of E. coli as an indicator organism in fresh water has led to numerous studies focusing on cell properties and transport behavior. However, previous studies have been unable to assess if differences in E. coli cell surface properties and genomic variation are associated with different environmental habitats. In this study, we investigated the variation in characteristics of E. coli obtained from stream water and stream bottom sediments. Cell properties were measured for 77 genomically different E. coli strains (44 strains isolated from sediments and 33 strains isolated from water) under common stream conditions in the Upper Midwestern United States: pH 8.0, ionic strength 10 mM and 22°C. Measured cell properties include hydrophobicity, zeta potential, net charge, total acidity, and extracellular polymeric substance (EPS) composition. Our results indicate that stream sediment E. coli had significantly greater hydrophobicity, greater EPS protein content and EPS sugar content, less negative net charge, and higher point of zero charge than stream water E. coli . A significant positive correlation was observed between hydrophobicity and EPS protein for stream sediment E. coli but not for stream water E. coli . Additionally, E. coli surviving in the same habitat tended to have significantly larger (GTG) 5 genome similarity. After accounting for the intrinsic impact from the genome, environmental habitat was determined to be a factor influencing some cell surface properties, such as hydrophobicity. The diversity of cell properties and its resulting impact on particle interactions should be considered for environmental fate and transport modeling of aquatic indicator organisms such as E. coli .

Biota connect aquatic habitats throughout freshwater ecosystem mosaics

Science.gov (United States)

Schofield, Kate A.; Alexander, Laurie C.; Ridley, Caroline E.; Vanderhoof, Melanie; Fritz, Ken M.; Autrey, Bradley; DeMeester, Julie; Kepner, William G.; Lane, Charles R.; Leibowitz, Scott; Pollard, Amina I.

2018-01-01

Freshwater ecosystems are linked at various spatial and temporal scales by movements of biota adapted to life in water. We review the literature on movements of aquatic organisms that connect different types of freshwater habitats, focusing on linkages from streams and wetlands to downstream waters. Here, streams, wetlands, rivers, lakes, ponds, and other freshwater habitats are viewed as dynamic freshwater ecosystem mosaics (FEMs) that collectively provide the resources needed to sustain aquatic life. Based on existing evidence, it is clear that biotic linkages throughout FEMs have important consequences for biological integrity and biodiversity. All aquatic organisms move within and among FEM components, but differ in the mode, frequency, distance, and timing of their movements. These movements allow biota to recolonize habitats, avoid inbreeding, escape stressors, locate mates, and acquire resources. Cumulatively, these individual movements connect populations within and among FEMs and contribute to local and regional diversity, resilience to disturbance, and persistence of aquatic species in the face of environmental change. Thus, the biological connections established by movement of biota among streams, wetlands, and downstream waters are critical to the ecological integrity of these systems. Future research will help advance our understanding of the movements that link FEMs and their cumulative effects on downstream waters.

ECOLOGICAL ANALYSIS OF HYDROLOGIC DISTURBANCE REGIMES IN STREAMS OF NORTH AND SOUTH DAKOTA

Science.gov (United States)

Streamflow variability is an important component of physical disturbance in streams, and is likely to be a major organizing feature of habitat for stream fishes. The disturbance regime in streams is frequently described by the variability in streamflow from both floods and prolo...

Juvenile coho salmon growth and health in streams across an urbanization gradient

Science.gov (United States)

Spanjer, Andrew R.; Moran, Patrick W.; Larsen, Kimberly; Wetzel, Lisa; Hansen, Adam G.; Beauchamp, David A.

2018-01-01

Expanding human population and urbanization alters freshwater systems through structural changes to habitat, temperature effects from increased runoff and reduced canopy cover, altered flows, and increased toxicants. Current stream assessments stop short of measuring health or condition of species utilizing these freshwater habitats and fail to link specific stressors mechanistically to the health of organisms in the stream. Juvenile fish growth integrates both external and internal conditions providing a useful indicator of habitat quality and ecosystem health. Thus, there is a need to account for ecological and environmental influences on fish growth accurately. Bioenergetics models can simulate changes in growth and consumption in response to environmental conditions and food availability to account for interactions between an organism's environmental experience and utilization of available resources. The bioenergetics approach accounts for how thermal regime, food supply, and food quality affect fish growth. This study used a bioenergetics modeling approach to evaluate the environmental factors influencing juvenile coho salmon growth among ten Pacific Northwest streams spanning an urban gradient. Urban streams tended to be warmer, have earlier emergence dates and stronger early season growth. However, fish in urban streams experienced increased stress through lower growth efficiencies, especially later in the summer as temperatures warmed, with as much as a 16.6% reduction when compared to fish from other streams. Bioenergetics modeling successfully characterized salmonid growth in small perennial streams as part of a more extensive monitoring program and provides a powerful assessment tool for characterizing mixed life-stage specific responses in urban streams.

Forest inventory, Peter T. Johnson Wildlife Mitigation Unit, Craig Mountain, Idaho. Final report

International Nuclear Information System (INIS)

Narolski, S.W.

1996-12-01

The primary objective of this report is to determine the quantity and quality of existing forest habitat types on the 59,991-acre Peter T. Johnson Wildlife Mitigation Unit (WMU). Products from this effort include a description of the ecological condition, a map of habitat types, and an inventory of forest resources on the WMU lands. The purpose of this and other resource inventories (plant and wildlife) is to assess the current resources condition of the WMU and to provide necessary information to generate a long-term management for this area

Forest inventory: Peter T. Johnson Wildlife Mitigation Unit, Craig Mountain, Idaho. Final Report.

Energy Technology Data Exchange (ETDEWEB)

Narolski, Steven W.

1996-12-01

The primary objective of this report is to determine the quantity and quality of existing forest habitat types on the 59,991-acre Peter T. Johnson Wildlife Mitigation Unit (WMU). Products from this effort include a description of the ecological condition, a map of habitat types, and an inventory of forest resources on the WMU lands. The purpose of this and other resource inventories (plant and wildlife) is to assess the current resources condition of the WMU and to provide necessary information to generate a long-term management for this area.

Distribution of oligochaetes in a stream in the Atlantic Forest in southeastern Brazil.

Science.gov (United States)

Rosa, B F J V; Martins, R T; Alves, R G

2015-01-01

The oligochaetes are considered good indicators of ecological conditions and specific types of habitats. Among the factors that influence the distribution of these invertebrates are the water flow and the nature of the substrate. The aim of this study is to describe the composition and distribution of oligochaete species in a first-order stream in Atlantic Forest and try to identify if some species are associated with characteristics of particular types of habitats. In the dry season and in the rainy season, sand and litter samples in two riffle areas and two pool areas were collected in different parts along the stream using a hand net. The greatest observed richness and abundance occurred in sand in the pool, however the greatest estimated richness was obtained for litter in the pool. The Kruskal-Wallis analysis showed effect of the different types of habitat on the abundance and richness of oligochaetes. The Nonmetric Multidimensional Scaling (NMDS) and Multiresponse Permutation Procedure analysis (MRPP) indicated that the variation in the fauna composition had relation with different types of substrates. The indicator species analysis showed that Limnodrilus. hoffmeisteri was an indicator species in both the riffle sand and pool sand and Pristina americana was only an indicator in the pool sand. The high organic matter content in both sandy habitats probably favored the greater abundance of oligochaetes. The results showed that the substrate constitutes an important factor for the local distribution of these invertebrates in streams. The variation of the community structure among mesohabitats and the presence of indicator species of specific types of habitats in the stream demonstrate the importance of environmental heterogeneity for the oligochaetes fauna in forested streams.

Influences of spatial and temporal variation on fish-habitat relationships defined by regression quantiles

Science.gov (United States)

Dunham, J.B.; Cade, B.S.; Terrell, J.W.

2002-01-01

We used regression quantiles to model potentially limiting relationships between the standing crop of cutthroat trout Oncorhynchus clarki and measures of stream channel morphology. Regression quantile models indicated that variation in fish density was inversely related to the width:depth ratio of streams but not to stream width or depth alone. The spatial and temporal stability of model predictions were examined across years and streams, respectively. Variation in fish density with width:depth ratio (10th-90th regression quantiles) modeled for streams sampled in 1993-1997 predicted the variation observed in 1998-1999, indicating similar habitat relationships across years. Both linear and nonlinear models described the limiting relationships well, the latter performing slightly better. Although estimated relationships were transferable in time, results were strongly dependent on the influence of spatial variation in fish density among streams. Density changes with width:depth ratio in a single stream were responsible for the significant (P 80th). This suggests that stream-scale factors other than width:depth ratio play a more direct role in determining population density. Much of the variation in densities of cutthroat trout among streams was attributed to the occurrence of nonnative brook trout Salvelinus fontinalis (a possible competitor) or connectivity to migratory habitats. Regression quantiles can be useful for estimating the effects of limiting factors when ecological responses are highly variable, but our results indicate that spatiotemporal variability in the data should be explicitly considered. In this study, data from individual streams and stream-specific characteristics (e.g., the occurrence of nonnative species and habitat connectivity) strongly affected our interpretation of the relationship between width:depth ratio and fish density.

US Department of Energy interim mixed waste inventory report: Waste streams, treatment capacities and technologies: Volume 4, Site specific---Ohio through South Carolina

International Nuclear Information System (INIS)

1993-04-01

The Department of Energy (DOE) has prepared this report to provide an inventory of its mixed wastes and treatment capacities and technologies in response to Section 105(a) of the Federal Facility Compliance Act (FFCAct) of 1992 (Pub. L. No. 102-386). As required by the FFCAct-1992, this report provides site-specific information on DOE's mixed waste streams and a general review of available and planned treatment facilities for mixed wastes at the following five Ohio facilities: Battelle Columbus Laboratories; Fernald Environmental Management Project; Mound Plant; Portsmouth Gaseous Diffusion Plant; and RMI, Titanium Company

Lake Roosevelt Rainbow Trout : Habitat/Passage Improvement Project Annual Report 2000.

Energy Technology Data Exchange (ETDEWEB)

Sear, Sheri

2001-02-01

Lake Franklin D. Roosevelt was created with the completion of the Grand Coulee Dam in 1942. The lake stretches 151 miles up-stream to the International border between the United States and Canada at the 49th parallel. Increased recreational use, subsistence and sport fishing has resulted in intense interest and possible exploitation of the resources within the lake. Previous studies of the lake and its fishery have been limited. Early studies indicate that natural reproduction within the lake and tributaries are not sufficient to support a rainbow trout (Onchoryhnchus mykiss) fishery (Scholz et. al., 1988). These studies indicate that the rainbow trout population may be limited by lack of suitable habitat for spawning and rearing (Scholz et. al., 1988). The initial phase of this project (Phase I, baseline data collection- 1990-91) was directed at the assessment of limiting factors such as quality and quantity of available spawning gravel, identification of passage barriers, and assessment of other limiting factors. Population estimates were conducted using the Seber/LeCren removal/depletion method. After the initial assessment of stream parameters, several streams were selected for habitat/passage improvement projects (Phase II, implementation-1992-96). At the completion of project habitat improvements, the final phase (Phase III, monitoring) began. This phase will assess changes and gauge the success achieved through the improvements. The objective of the project is to correct passage barriers and improve habitat conditions of selected tributaries to Lake Roosevelt for adfluvial rainbow trout that utilize tributary streams for spawning and rearing. Streams with restorable habitats were selected for improvements. Completion of improvement efforts should increase the adfluvial rainbow trout contribution to the resident fishery in Lake Roosevelt. Three co-operating agencies, the Confederated Tribes of the Colville Reservation (CCT), the Spokane Tribe of Indians (STI

Lake Roosevelt Rainbow Trout : Habitat/Passage Improvement Project Annual Report 1999.

Energy Technology Data Exchange (ETDEWEB)

Jones, Charles D.

2000-02-01

Lake Franklin D. Roosevelt was created with the completion of the Grand Coulee Dam in 1942. The lake stretches 151 miles up-stream to the International border between the United States and Canada at the 49th parallel. Increased recreational use, subsistence and sport fishing has resulted in intense interest and possible exploitation of the resources within the lake. Previous studies of the lake and its fishery have been limited. Early studies indicate that natural reproduction within the lake and tributaries are not sufficient to support a rainbow trout (Onchoryhnchus mykiss) fishery (Scholz et. al., 1988). These studies indicate that the rainbow trout population may be limited by lack of suitable habitat for spawning and rearing (Scholz et. al., 1988). The initial phase of this project (Phase I, baseline data collection- 1990-91) was directed at the assessment of limiting factors such as quality and quantity of available spawning gravel, identification of passage barriers, and assessment of other limiting factors. Population estimates were conducted using the Seber/LeCren removal/depletion method. After the initial assessment of stream parameters, several streams were selected for habitat/passage improvement projects (Phase II, implementation-1992-96). At the completion of project habitat improvements, the final phase (Phase III, monitoring) began. This phase will assess changes and gauge the success achieved through the improvements. The objective of the project is to correct passage barriers and improve habitat conditions of selected tributaries to Lake Roosevelt for adfluvial rainbow trout that utilize tributary streams for spawning and rearing. Streams with restorable habitats were selected for improvements. Completion of improvement efforts should increase the adfluvial rainbow trout contribution to the resident fishery in Lake Roosevelt. Three co-operating agencies, the Confederated Tribes of the Colville Reservation (CCT), the Spokane Tribe of Indians (STI

Bioassessment tools in novel habitats: an evaluation of indices and sampling methods in low-gradient streams in California.

Science.gov (United States)

Mazor, Raphael D; Schiff, Kenneth; Ritter, Kerry; Rehn, Andy; Ode, Peter

2010-08-01

Biomonitoring programs are often required to assess streams for which assessment tools have not been developed. For example, low-gradient streams (slopeindices in the state were developed in high-gradient systems. This study evaluated the performance of three sampling methods [targeted riffle composite (TRC), reach-wide benthos (RWB), and the margin-center-margin modification of RWB (MCM)] and two indices [the Southern California Index of Biotic Integrity (SCIBI) and the ratio of observed to expected taxa (O/E)] in low-gradient streams in California for application in this habitat type. Performance was evaluated in terms of efficacy (i.e., ability to collect enough individuals for index calculation), comparability (i.e., similarity of assemblages and index scores), sensitivity (i.e., responsiveness to disturbance), and precision (i.e., ability to detect small differences in index scores). The sampling methods varied in the degree to which they targeted macroinvertebrate-rich microhabitats, such as riffles and vegetated margins, which may be naturally scarce in low-gradient streams. The RWB method failed to collect sufficient numbers of individuals (i.e., >or=450) to calculate the SCIBI in 28 of 45 samples and often collected fewer than 100 individuals, suggesting it is inappropriate for low-gradient streams in California; failures for the other methods were less common (TRC, 16 samples; MCM, 11 samples). Within-site precision, measured as the minimum detectable difference (MDD) was poor but similar across methods for the SCIBI (ranging from 19 to 22). However, RWB had the lowest MDD for O/E scores (0.20 versus 0.24 and 0.28 for MCM and TRC, respectively). Mantel correlations showed that assemblages were more similar within sites among methods than within methods among sites, suggesting that the sampling methods were collecting similar assemblages of organisms. Statistically significant disagreements among methods were not detected, although O/E scores were higher

Evaluating Stream Restoration Projects: What Do We Learn from Monitoring?

Directory of Open Access Journals (Sweden)

Zan Rubin

2017-02-01

Full Text Available Two decades since calls for stream restoration projects to be scientifically assessed, most projects are still unevaluated, and conducted evaluations yield ambiguous results. Even after these decades of investigation, do we know how to define and measure success? We systematically reviewed 26 studies of stream restoration projects that used macroinvertebrate indicators to assess the success of habitat heterogeneity restoration projects. All 26 studies were previously included in two meta-analyses that sought to assess whether restoration programs were succeeding. By contrast, our review focuses on the evaluations themselves, and asks what exactly we are measuring and learning from these evaluations. All 26 studies used taxonomic diversity, richness, or abundance of invertebrates as biological measures of success, but none presented explicit arguments why those metrics were relevant measures of success for the restoration projects. Although changes in biodiversity may reflect overall ecological condition at the regional or global scale, in the context of reach-scale habitat restoration, more abundance and diversity may not necessarily be better. While all 26 studies sought to evaluate the biotic response to habitat heterogeneity enhancement projects, about half of the studies (46% explicitly measured habitat alteration, and 31% used visual estimates of grain size or subjectively judged ‘habitat quality’ from protocols ill-suited for the purpose. Although the goal of all 26 projects was to increase habitat heterogeneity, 31% of the studies either sampled only riffles or did not specify the habitats sampled. One-third of the studies (35% used reference ecosystems to define target conditions. After 20 years of stream restoration evaluation, more work remains for the restoration community to identify appropriate measures of success and to coordinate monitoring so that evaluations are at a scale capable of detecting ecosystem change.

Successional colonization of temporary streams: An experimental approach using aquatic insects

Science.gov (United States)

Godoy, Bruno Spacek; Queiroz, Luciano Lopes; Lodi, Sara; Nascimento de Jesus, Jhonathan Diego; Oliveira, Leandro Gonçalves

2016-11-01

The metacommunity concept studies the processes that structure communities on local and regional scales. This concept is useful to assess spatial variability. However, temporal patterns (e.g., ecological succession and colonization) are neglected in metacommunity studies, since such patterns require temporally extensive, and hard to execute studies. We used experimental habitats in temporary streams located within the Brazilian Cerrado to evaluate the importance of succession for the aquatic insect metacommunity. Five artificial habitats consisting of wrapped crushed rock were set transversally to the water flow in five streams. The habitats were sampled weekly to assess community composition, and replaced after sampling to identify new potential colonizers. We analyzed the accumulation of new colonizers after each week using a logistic model. We selected pairs of experimental habitats and estimated the Bray-Curtis dissimilarity index to assess the community composition trajectory during the experiment. We used the dissimilarity values in ANOVA tests, identifying the importance of time and space for the community. The number of new taxa stabilized in the third week, and we estimated a weekly increase of 1.61 new taxa in the community after stabilization. The overall pattern was a small change on community composition, but one stream had a higher weekly turnover. Our results showed a relevant influence of time in the initial communities of aquatic insects of temporary streams. However, we must observe the temporal pattern in a spatial context, once different streams have different successional history regarding number of taxa and community turnover. We highlight the importance of aerial dispersal and movement to seek oviposition sites as an important factor in determining colonization patterns.

EFFECTIVENESS OF LARGE WOODY DEBRIS IN STREAM REHABILITATION PROJECTS IN URBAN BASINS. (R825284)

Science.gov (United States)

Urban stream rehabilitation projects commonly include log placement to establish the types of habitat features associated with large woody debris (LWD) in undisturbed streams. Six urban in-stream rehabilitation projects were examined in the Puget Sound Lowland of western Washi...

Climate-induced glacier and snow loss imperils alpine stream insects

Science.gov (United States)

Giersch, J. Joseph; Hotaling, Scott; Kovach, Ryan; Jones, Leslie A.; Muhlfeld, Clint C.

2017-01-01

Climate warming is causing rapid loss of glaciers and snowpack in mountainous regions worldwide. These changes are predicted to negatively impact the habitats of many range-restricted species, particularly endemic, mountaintop species dependent on the unique thermal and hydrologic conditions found only in glacier-fed and snowmelt-driven alpine streams. Though progress has been made, existing understanding of the status, distribution, and ecology of alpine aquatic species, particularly in North America, is lacking, thereby hindering conservation and management programs. Two aquatic insects – the meltwater stonefly Lednia tumana and the glacier stonefly Zapada glacier – were recently proposed for listing under the U.S. Endangered Species Act due to climate-change-induced habitat loss. Using a large dataset (272 streams, 482 total sites) with high-resolution climate and habitat information, we describe the distribution, status, and key environmental features that limit L. tumana and Z. glacier across the northern Rocky Mountains. Lednia tumana was detected in 113 streams (175 sites) within Glacier National Park (GNP) and surrounding areas. The probability of L. tumana occurrence increased with cold stream temperatures and close proximity to glaciers and permanent snowfields. Similarly, densities of L. tumana declined with increasing distance from stream source. Zapada glacier was only detected in 10 streams (20 sites), six in GNP and four in mountain ranges up to ~600 km southwest. Our results show that both L. tumana and Z. glacier inhabit an extremely narrow distribution, restricted to short sections of cold, alpine streams often below glaciers predicted to disappear over the next two decades. Climate warming-induced glacier and snow loss clearly imperils the persistence of L. tumana and Z. glacier throughout their ranges, highlighting the role of mountaintop aquatic invertebrates as sentinels of climate change in mid-latitude regions.

Prioritizing Road Treatments using the Geomorphic Roads Analysis and Inventory Package (GRAIP) to Improve Watershed Conditions in the Wall Creek Watershed, Oregon

Science.gov (United States)

Day, K. T.; Black, T.; Clifton, C.; Luce, C.; McCune, S.; Nelson, N.

2010-12-01

Wall Creek, tributary to the North Fork John Day River in eastern Oregon, was identified as a priority watershed by the Umatilla National Forest for restoration in 2002. Most streams in this 518 km2 multi-ownership watershed are designated critical habitat for threatened steelhead. Eight streams are listed on the Oregon 303(d) list for elevated temperatures and excess sedimentation. Over 1000 km of public and private roads in the watershed present a major source of potential water quality and habitat impairment. We conducted a watershed-wide inventory of roads using the Geomorphic Roads Analysis and Inventory Package (GRAIP) in 2009 to quantify sediment contributions from roads to streams. GRAIP is a field and GIS-based model developed by the Forest Service Rocky Mountain Research Station and Utah State University that georeferences and quantifies road hydrologic connectivity, sediment production and delivery, mass wasting, and risk of diversion and plugging at stream crossings. Field survey and modeling produced data for 6,473 drainage locations on 726 km of road (most of the publically owned roads) quantifying the location and mass of sediment produced and delivered to streams. Findings indicate a relatively small subset of roads deliver the majority of road-produced fine sediment; 12 percent of the road length delivers 90 percent of the total fine sediment to streams. Overall fine sediment production in the watershed is relatively low (with an estimated background erosion rate of 518,000 kg/yr for the watershed) and sediment produced and delivered from the road system appears to be a modest addition. Road surfaces produce approximately 81,455 kg of fine sediment per year, with 20,976 kg/year delivered to the stream network. Fifty-nine gullies were observed, 41 of which received road runoff. Sixteen road-related landslides were also observed. The excavated volume of these features totals 3,922,000 kg which is equivalent to 175 years of fine sediment delivery at

Using forest inventory data to assess fisher resting habitat suitability in California.

Science.gov (United States)

William J. Zielinski; Richard L. Truex; Jeffrey R. Dunk; Tom Gaman

2006-01-01

The fisher (Martes pennanti) is a forest-dwelling carnivore whose current distribution and association with late-seral forest conditions make it vulnerable to stand-altering human activities or natural disturbances. Fishers select a variety of structures for daily resting bouts. These habitat elements, together with foraging and reproductive (denning) habitat,...

Distribution of oligochaetes in a stream in the Atlantic Forest in southeastern Brazil

Directory of Open Access Journals (Sweden)

BFJV. Rosa

Full Text Available The oligochaetes are considered good indicators of ecological conditions and specific types of habitats. Among the factors that influence the distribution of these invertebrates are the water flow and the nature of the substrate. The aim of this study is to describe the composition and distribution of oligochaete species in a first-order stream in Atlantic Forest and try to identify if some species are associated with characteristics of particular types of habitats. In the dry season and in the rainy season, sand and litter samples in two riffle areas and two pool areas were collected in different parts along the stream using a hand net. The greatest observed richness and abundance occurred in sand in the pool, however the greatest estimated richness was obtained for litter in the pool. The Kruskal-Wallis analysis showed effect of the different types of habitat on the abundance and richness of oligochaetes. The Nonmetric Multidimensional Scaling (NMDS and Multiresponse Permutation Procedure analysis (MRPP indicated that the variation in the fauna composition had relation with different types of substrates. The indicator species analysis showed that Limnodrilus. hoffmeisteri was an indicator species in both the riffle sand and pool sand and Pristina americana was only an indicator in the pool sand. The high organic matter content in both sandy habitats probably favored the greater abundance of oligochaetes. The results showed that the substrate constitutes an important factor for the local distribution of these invertebrates in streams. The variation of the community structure among mesohabitats and the presence of indicator species of specific types of habitats in the stream demonstrate the importance of environmental heterogeneity for the oligochaetes fauna in forested streams.

Instream Physical Habitat Modelling Types

DEFF Research Database (Denmark)

Conallin, John; Boegh, Eva; Krogsgaard, Jørgen

2010-01-01

The introduction of the EU Water Framework Directive (WFD) is providing member state water resource managers with significant challenges in relation to meeting the deadline for 'Good Ecological Status' by 2015. Overall, instream physical habitat modelling approaches have advantages and disadvanta......The introduction of the EU Water Framework Directive (WFD) is providing member state water resource managers with significant challenges in relation to meeting the deadline for 'Good Ecological Status' by 2015. Overall, instream physical habitat modelling approaches have advantages...... suit their situations. This paper analyses the potential of different methods available for water managers to assess hydrological and geomorphological impacts on the habitats of stream biota, as requested by the WFD. The review considers both conventional and new advanced research-based instream...... physical habitat models. In parametric and non-parametric regression models, model assumptions are often not satisfied and the models are difficult to transfer to other regions. Research-based methods such as the artificial neural networks and individual-based modelling have promising potential as water...

Rehabilitating agricultural streams in Australia with wood: a review.

Science.gov (United States)

Lester, Rebecca E; Boulton, Andrew J

2008-08-01

Worldwide, the ecological condition of streams and rivers has been impaired by agricultural practices such as broadscale modification of catchments, high nutrient and sediment inputs, loss of riparian vegetation, and altered hydrology. Typical responses include channel incision, excessive sedimentation, declining water quality, and loss of in-stream habitat complexity and biodiversity. We review these impacts, focusing on the potential benefits and limitations of wood reintroduction as a transitional rehabilitation technique in these agricultural landscapes using Australian examples. In streams, wood plays key roles in shaping velocity and sedimentation profiles, forming pools, and strengthening banks. In the simplified channels typical of many agricultural streams, wood provides habitat for fauna, substrate for biofilms, and refuge from predators and flow extremes, and enhances in-stream diversity of fish and macroinvertebrates.Most previous restoration studies involving wood reintroduction have been in forested landscapes, but some results might be extrapolated to agricultural streams. In these studies, wood enhanced diversity of fish and macroinvertebrates, increased storage of organic material and sediment, and improved bed and bank stability. Failure to meet restoration objectives appeared most likely where channel incision was severe and in highly degraded environments. Methods for wood reintroduction have logistical advantages over many other restoration techniques, being relatively low cost and low maintenance. Wood reintroduction is a viable transitional restoration technique for agricultural landscapes likely to rapidly improve stream condition if sources of colonists are viable and water quality is suitable.

Wildlife inventory and analysis of some energy development impacts

International Nuclear Information System (INIS)

Alldredge, A.W.

1977-01-01

Impacts resulting from a nuclear fracturing experiment (Project Rio Blanco) are described. Matrices used in the presentation of environmental impact and inventory data are discussed and a procedure that can be used in conducting environmental inventory and impact studies is given. Results of the Rio Blanco Study indicated that measurable environmental impacts resulted from conventional physical activities and ground motion. Impacts of ground motion were most severe within 2.4 km of the emplacement well (EW) and were predominantly associated with steep ravines and stream banks and rocky cliffs. Animals suffering deleterious impacts were those associated with stream banks, cliffs, and burrows. No mortality resulting from ground motion was observed in large mammals. Following detonation, flow and turbidity had increased in a small stream adjacent to the EW. Two interaction matrices are described and used to present environmental inventory data in a simple graphic display. One illustrates trophic relationships for 28 different species of mammals while the other presents biological events relative to seasons and is used to develop timing strategy for the execution of projects. The third matrix describes documented environmental impacts and was used to portray results of the Rio Blanco study. This matrix includes categories of impacts, distances from the source term, frequency and magnitude ratings, as well as a category for basis of rating

Aquatic Habitat Bottom Classification Using ADCP

Science.gov (United States)

Description of physical aquatic habitat often includes data describing distributions of water depth, velocity and bed material type. Water depth and velocity in streams deeper than about 1 m may be continuously mapped using an acoustic Doppler current profiler from a moving boat. Herein we examine...

Influences of environmental cues, migration history and habitat familiarity on partial migration

DEFF Research Database (Denmark)

Skov, Christian; Aarestrup, Kim; Baktoft, Henrik

2010-01-01

The factors that drive partial migration in organisms are not fully understood. Roach (Rutilus rutilus), a freshwater fish, engage in partial migration where parts of populations switch between summer habitats in lakes and winter habitats in connected streams. To test if the partial migration trait...

The interactive effects of climate change, riparian management, and a nonnative predator on stream-rearing salmon.

Science.gov (United States)

Lawrence, David J; Stewart-Koster, Ben; Olden, Julian D; Ruesch, Aaron S; Torgersen, Christian E; Lawler, Joshua J; Butcher, Don P; Crown, Julia K

2014-06-01

Predicting how climate change is likely to interact with myriad other stressors that threaten species of conservation concern is an essential challenge in aquatic ecosystems. This study provides a framework to accomplish this task in salmon-bearing streams of the northwestern United States, where land-use-related reductions in riparian shading have caused changes in stream thermal regimes, and additional warming from projected climate change may result in significant losses of coldwater fish habitat over the next century. Predatory, nonnative smallmouth bass have also been introduced into many northwestern streams, and their range is likely to expand as streams warm, presenting an additional challenge to the persistence of threatened Pacific salmon. The goal of this work was to forecast the interactive effects of climate change, riparian management, and nonnative species on stream-rearing salmon and to evaluate the capacity of restoration to mitigate these effects. We intersected downscaled global climate forecasts with a local-scale water temperature model to predict mid- and end-of-century temperatures in streams in the Columbia River basin. We compared one stream that is thermally impaired due to the loss of riparian vegetation and another that is cooler and has a largely intact riparian corridor. Using the forecasted stream temperatures in conjunction with fish-habitat models, we predicted how stream-rearing chinook salmon and bass distributions would change as each stream warmed. In the highly modified stream, end-of-century warming may cause near total loss of chinook salmon-rearing habitat and a complete invasion of the upper watershed by bass. In the less modified stream, bass were thermally restricted from the upstream-most areas. In both systems, temperature increases resulted in higher predicted spatial overlap between stream-rearing chinook salmon and potentially predatory bass in the early summer (two- to fourfold increase) and greater abundance of

Effect of stocking sub-yearling Atlantic salmon on the habitat use of sub-yearling rainbow trout

Science.gov (United States)

Johnson, James H.

2016-01-01

Atlantic salmon (Salmo salar) restoration in the Lake Ontario watershed may depend on the species' ability to compete with naturalized non-native salmonids, including rainbow trout (Oncorhynchus mykiss) in Lake Ontario tributaries. This study examined interspecific habitat associations between sub-yearling Atlantic salmon and rainbow trout as well as the effect of salmon stocking on trout habitat in two streams in the Lake Ontario watershed. In sympatry, Atlantic salmon occupied significantly faster velocities and deeper areas than rainbow trout. However, when examining the habitat use of rainbow trout at all allopatric and sympatric sites in both streams, trout habitat use was more diverse at the sympatric sites with an orientation for increased cover and larger substrate. In Grout Brook, where available habitat remained constant, there was evidence suggesting that trout may have shifted to slower and shallower water in the presence of salmon. The ability of sub-yearling Atlantic salmon to affect a habitat shift in rainbow trout may be due to their larger body size and/or larger pectoral fin size. Future studies examining competitive interactions between these species during their first year of stream residence should consider the size advantage that earlier emerging Atlantic salmon will have over rainbow trout.

Fish complementarity is associated to forests in Amazonian streams

Directory of Open Access Journals (Sweden)

Carolina Rodrigues Bordignon

Full Text Available The functional structure of communities is commonly measured by the variability in functional traits, which may demonstrate complementarity or redundancy patterns. In this study, we tested the influence of environmental variables on the functional structure of fish assemblages in Amazonian streams within a deforestation gradient. We calculated six ecomorphological traits related to habitat use from each fish species, and used them to calculate the net relatedness index (NRI and the nearest taxon index (NTI. The set of species that used the habitat differently (complementary or overdispersed assemblages occurred in sites with a greater proportion of forests. The set of species that used the habitat in a similar way (redundant or clustered assemblages occurred in sites with a greater proportion of grasses in the stream banks. Therefore, the deforestation of entire watersheds, which has occurred in many Amazonian regions, may be a central factor for the functional homogenization of fish fauna.

Distribution and biophysical processes of beaded streams in Arctic permafrost landscapes

Science.gov (United States)

Arp, Christopher D.; Whitman, Matthew S.; Jones, Benjamin M.; Grosse, Guido; Gaglioti, Benjamin V.; Heim, Kurt C.

2015-01-01

Beaded streams are widespread in permafrost regions and are considered a common thermokarst landform. However, little is known about their distribution, how and under what conditions they form, and how their intriguing morphology translates to ecosystem functions and habitat. Here we report on a Circum-Arctic survey of beaded streams and a watershed-scale analysis in northern Alaska using remote sensing and field studies. We mapped over 400 channel networks with beaded morphology throughout the continuous permafrost zone of northern Alaska, Canada, and Russia and found the highest abundance associated with medium- to high- ground ice content permafrost in moderately sloping terrain. In the Fish Creek watershed, beaded streams accounted for half of the drainage density, occurring primarily as low-order channels initiating from lakes and drained lake basins. Beaded streams predictably transition to alluvial channels with increasing drainage area and decreasing channel slope, although this transition is modified by local controls on water and sediment delivery. Comparison of one beaded channel using repeat photography between 1948 and 2013 indicate a relatively stable landform and 14C dating of basal sediments suggest channel formation may be as early as the Pleistocene-Holocene transition. Contemporary processes, such as deep snow accumulation in riparian zones effectively insulates channel ice and allows for perennial liquid water below most beaded stream pools. Because of this, mean annual temperatures in pool beds are greater than 2°C, leading to the development of perennial thaw bulbs or taliks underlying these thermokarst features. In the summer, some pools thermally stratify, which reduces permafrost thaw and maintains coldwater habitats. Snowmelt generated peak-flows decrease rapidly by two or more orders of magnitude to summer low flows with slow reach-scale velocity distributions ranging from 0.1 to 0.01 m/s, yet channel runs still move water rapidly

Comparing stream-specific to generalized temperature models to guide salmonid management in a changing climate

Science.gov (United States)

Andrew K. Carlson,; William W. Taylor,; Hartikainen, Kelsey M.; Dana M. Infante,; Beard, Douglas; Lynch, Abigail

2017-01-01

Global climate change is predicted to increase air and stream temperatures and alter thermal habitat suitability for growth and survival of coldwater fishes, including brook charr (Salvelinus fontinalis), brown trout (Salmo trutta), and rainbow trout (Oncorhynchus mykiss). In a changing climate, accurate stream temperature modeling is increasingly important for sustainable salmonid management throughout the world. However, finite resource availability (e.g. funding, personnel) drives a tradeoff between thermal model accuracy and efficiency (i.e. cost-effective applicability at management-relevant spatial extents). Using different projected climate change scenarios, we compared the accuracy and efficiency of stream-specific and generalized (i.e. region-specific) temperature models for coldwater salmonids within and outside the State of Michigan, USA, a region with long-term stream temperature data and productive coldwater fisheries. Projected stream temperature warming between 2016 and 2056 ranged from 0.1 to 3.8 °C in groundwater-dominated streams and 0.2–6.8 °C in surface-runoff dominated systems in the State of Michigan. Despite their generally lower accuracy in predicting exact stream temperatures, generalized models accurately projected salmonid thermal habitat suitability in 82% of groundwater-dominated streams, including those with brook charr (80% accuracy), brown trout (89% accuracy), and rainbow trout (75% accuracy). In contrast, generalized models predicted thermal habitat suitability in runoff-dominated streams with much lower accuracy (54%). These results suggest that, amidst climate change and constraints in resource availability, generalized models are appropriate to forecast thermal conditions in groundwater-dominated streams within and outside Michigan and inform regional-level salmonid management strategies that are practical for coldwater fisheries managers, policy makers, and the public. We recommend fisheries professionals reserve resource

Sampling methods for amphibians in streams in the Pacific Northwest.

Science.gov (United States)

R. Bruce Bury; Paul Stephen. Corn

1991-01-01

Methods describing how to sample aquatic and semiaquatic amphibians in small streams and headwater habitats in the Pacific Northwest are presented. We developed a technique that samples 10-meter stretches of selected streams, which was adequate to detect presence or absence of amphibian species and provided sample sizes statistically sufficient to compare abundance of...

Temporally variable macroinvertebrate-stone relationships in streams

DEFF Research Database (Denmark)

Jacobsen, D.

2005-01-01

of fauna parameter and stone variable from different sampling dates (n=9-11) were rarely correlated to any of the measures of stream stability, this study has demonstrated high temporal variability in fauna-stone relationships (CV's of regression slopes). Consequently, temporally un-replicated studies......Stones were used to sample macroinvertebrates and characterise microhabitats at monthly or bimonthly intervals in six Ecuadorian streams covering a gradient in four different stability measures and other stream characteristics. The physical variables current velocity, water depth, horizontal...... of families vs. individuals) were related to the physical characteristics of individual stone habitats. My second objective was to quantify temporal variability in fauna-stone relationships and to analyse if such variability was related to overall stability of stream reaches. Partial Least Squares (PLS...

Fish Habitat and Fish Populations in a Southern Appalachian Watershed before and after Hurricane Hugo

Science.gov (United States)

C. Andrew Dolloff; Patricia A. Flebbe; Michael D. Owen

1994-01-01

Habitat features and relative abundance of all fish species were estimated in 8.4 km of a small mountain stream system before and 11 months after Hurricane Hugo crossed the southern Appalachians in September 1989. There was no change in the total amount (area) of each habitat type but the total number of habitat units decreased and average size and depth of habitat...

Late summer and fall use of stream margins by young-of year brown trout in a high-elevation stream

Science.gov (United States)

La Voie, W. J.; Hubert, W.A.

1997-01-01

We determined the relative abundance of young-of-year (YOY) brown trout (Salmo trutta) from late summer to fall during day and night in stream margin habitats of Douglas Creek, Wyoming. No significant differences in relative abundance were observed from August 14 through October 26. Few YOY brown trout were observed during the day over the entire sampling period, but significantly greater numbers were seen at night. Within stream margins, YOY brown trout of 36-75 mm total length primarily resided in concealment cover among interstices of cobbie during the day and emerged at night. Because no significant change in relative abundance was observed throughout the study period, we conclude that a shift to winter habitat did not occur up until three days prior to ice formation when the diurnal range in water temperature was 2.5-7.5??C.

A mechanistic assessment of seasonal microhabitat selection by drift-feeding rainbow trout Oncorhynchus mykiss in a southwestern headwater stream

Science.gov (United States)

Kalb, Bradley W.; Huntsman, Brock M.; Caldwell, Colleen A.; Bozek, Michael A.

2018-01-01

The positioning of fishes within a riverscape is dependent on the proximity of complementary habitats. In this study, foraging and non-foraging habitat were quantified monthly over an entire year for a rainbow trout (Oncorhynchus mykiss) population in an isolated, headwater stream in southcentral New Mexico. The stream follows a seasonal thermal and hydrologic pattern typical for a Southwestern stream and was deemed suitable for re-introduction of the native and close relative, Rio Grande cutthroat trout (O. clarkii virginalis). However, uncertainty associated with limited habitat needed to be resolved if repatriation of the native fish was to be successful. Habitat was evaluated using resource selection functions with a mechanistic drift-foraging model to explain trout distributions. Macroinvertebrate drift was strongly season- and temperature-dependent (lower in winter and spring, higher in summer and fall). Models identified stream depth as the most limiting factor for habitat selection across seasons and size-classes. Additionally, positions closer to cover were selected during the winter by smaller size-classes (0, 1, 2), while net energy intake was important during the spring for most size-classes (0, 1, 2, 3). Drift-foraging models identified that 81% of observed trout selected positions that could meet maintenance levels throughout the year. Moreover, 40% of selected habitats could sustain maximum growth. Stream positions occupied by rainbow trout were more energetically profitable than random sites regardless of season or size-class. Larger size-classes (3, 4+) were energetically more limited throughout the year than were smaller size-classes. This research suggests that habitat in the form of deep pools is of paramount importance for rainbow trout or native cutthroat trout.

Persistence at distributional edges: Columbia spotted frog habitat in the arid Great Basin, USA.

Science.gov (United States)

Arkle, Robert S; Pilliod, David S

2015-09-01

A common challenge in the conservation of broadly distributed, yet imperiled species is understanding which factors facilitate persistence at distributional edges, locations where populations are often vulnerable to extirpation due to changes in climate, land use, or distributions of other species. For Columbia spotted frogs (Rana luteiventris) in the Great Basin (USA), a genetically distinct population segment of conservation concern, we approached this problem by examining (1) landscape-scale habitat availability and distribution, (2) water body-scale habitat associations, and (3) resource management-identified threats to persistence. We found that areas with perennial aquatic habitat and suitable climate are extremely limited in the southern portion of the species' range. Within these suitable areas, native and non-native predators (trout and American bullfrogs [Lithobates catesbeianus]) are widespread and may further limit habitat availability in upper- and lower-elevation areas, respectively. At the water body scale, spotted frog occupancy was associated with deeper sites containing abundant emergent vegetation and nontrout fish species. Streams with American beaver (Castor canadensis) frequently had these structural characteristics and were significantly more likely to be occupied than ponds, lakes, streams without beaver, or streams with inactive beaver ponds, highlighting the importance of active manipulation of stream environments by beaver. Native and non-native trout reduced the likelihood of spotted frog occupancy, especially where emergent vegetation cover was sparse. Intensive livestock grazing, low aquatic connectivity, and ephemeral hydroperiods were also negatively associated with spotted frog occupancy. We conclude that persistence of this species at the arid end of its range has been largely facilitated by habitat stability (i.e., permanent hydroperiod), connectivity, predator-free refugia, and a commensalistic interaction with an ecosystem

THE USE OF GEOMORPHOLOGY AND STREAM STABILITY IN THE ASSESSMENT OF THE RISK OF STREAM IMPAIRMENT FROM SEDIMENT

Science.gov (United States)

The evaluation of the current condition is critical to the management of streams impaired by sediment and other non-point source stressors, which adversely affect both physical habitat and water quality. Several rating and classification systems based on geomorphic data exist for...

Umatilla River Basin Anadromous Fish Habitat Enhancement Project : 1995 Annual Report.

Energy Technology Data Exchange (ETDEWEB)

Shaw, R.Todd

1996-05-01

During the 1995 - 96 project period, four new habitat enhancement projects were implemented under the Umatilla River Basin Anadromous Fish Habitat Enhancement Project by the Confederated Tribes of the Umatilla Indian Reservation (CTUIR) in the upper Umatilla River Basin. A total of 38,644 feet of high tensile smooth wire fencing was constructed along 3.6 miles of riparian corridor in the Meacham Creek, Wildhorse Creek, Greasewood Creek, West Fork of Greasewood Creek and Mission Creek watersheds. Additional enhancements on Wildhorse Creek and the lower Greasewood Creek System included: (1) installation of 0.43 miles of smooth wire between river mile (RM) 10.25 and RM 10.5 Wildhorse Creek (fence posts and structures had been previously placed on this property during the 1994 - 95 project period), (2) construction of 46 sediment retention structures in stream channels and maintenance to 18 existing sediment retention structures between RM 9.5 and RM 10.25 Wildhorse Creek, and (3) revegetation of stream corridor areas and adjacent terraces with 500 pounds of native grass seed or close species equivalents and 5,000 native riparian shrub/tree species to assist in floodplain recovery, stream channel stability and filtering of sediments during high flow periods. U.S. Fish and Wildlife Service (USFWS), Bureau of Indian Affairs (BIA) and Environmental Protection Agency (EPA) funds were cost shared with Bonneville Power Administration (BPA) funds, provided under this project, to accomplish habitat enhancements. Water quality monitoring continued and was expanded for temperature and turbidity throughout the upper Umatilla River Watershed. Physical habitat surveys were conducted on the lower 13 river miles of Wildhorse Creek and within the Greasewood Creek Project Area to characterize habitat quality and to quantify various habitat types by area.

Assessing the suitable habitat for reintroduction of brown trout (Salmo trutta forma fario) in a lowland river: A modeling approach.

Science.gov (United States)

Boets, Pieter; Gobeyn, Sacha; Dillen, Alain; Poelman, Eddy; Goethals, Peter L M

2018-05-01

Huge efforts have been made during the past decades to improve the water quality and to restore the physical habitat of rivers and streams in western Europe. This has led to an improvement in biological water quality and an increase in fish stocks in many countries. However, several rheophilic fish species such as brown trout are still categorized as vulnerable in lowland streams in Flanders (Belgium). In order to support cost-efficient restoration programs, habitat suitability modeling can be used. In this study, we developed an ensemble of habitat suitability models using metaheuristic algorithms to explore the importance of a large number of environmental variables, including chemical, physical, and hydromorphological characteristics to determine the suitable habitat for reintroduction of brown trout in the Zwalm River basin (Flanders, Belgium), which is included in the Habitats Directive. Mean stream velocity, water temperature, hiding opportunities, and presence of pools or riffles were identified as the most important variables determining the habitat suitability. Brown trout mainly preferred streams with a relatively high mean reach stream velocity (0.2-1 m/s), a low water temperature (7-15°C), and the presence of pools. The ensemble of models indicated that most of the tributaries and headwaters were suitable for the species. Synthesis and applications . Our results indicate that this modeling approach can be used to support river management, not only for brown trout but also for other species in similar geographical regions. Specifically for the Zwalm River basin, future restoration of the physical habitat, removal of the remaining migration barriers and the development of suitable spawning grounds could promote the successful restoration of brown trout.

The interactive effects of climate change, riparian management, and a non-native predators on stream-rearing salmon

Science.gov (United States)

Lawrence, David J.; Stewart-Koster, Ben; Olden, Julian D.; Ruesch, Aaron S.; Torgersen, Christian E.; Lawler, Joshua J.; Butcher, Don P.; Crown, Julia K.

2014-01-01

Predicting how climate change is likely to interact with myriad other stressors that threaten species of conservation concern is an essential challenge in aquatic ecosystems. This study provides a framework to accomplish this task in salmon-bearing streams of the northwestern United States, where land-use related reductions in riparian shading have caused changes in stream thermal regimes, and additional warming from projected climate change may result in significant losses of coldwater fish habitat over the next century. Predatory non-native smallmouth bass have also been introduced into many northwestern streams and their range is likely to expand as streams warm, presenting an additional challenge to the persistence of threatened Pacific salmon. The goal of this work was to forecast the interactive effects of climate change, riparian management, and non-native species on stream-rearing salmon, and to evaluate the capacity of restoration to mitigate these effects. We intersected downscaled global climate forecasts with a local-scale water temperature model to predict mid- and end-of-century temperatures in streams in the Columbia River basin; we compared one stream that is thermally impaired due to the loss of riparian vegetation and another that is cooler and has a largely intact riparian corridor. Using the forecasted stream temperatures in conjunction with fish-habitat models, we predicted how stream-rearing Chinook salmon and bass distributions would change as each stream warmed. In the highly modified stream, end-of-century warming may cause near total loss of Chinook salmon rearing habitat and a complete invasion of the upper watershed by bass. In the less modified stream, bass were thermally restricted from the upstream-most areas. In both systems, temperature increases resulted in higher predicted spatial overlap between stream-rearing Chinook salmon and potentially predatory bass in the early summer (2-4-fold increase) and greater abundance of bass. We

Wetlands & Deepwater Habitats - MO 2012 East West Gateway Wetlands (SHP)

Data.gov (United States)

NSGIC State | GIS Inventory — Cowardin’s Classification of Wetlands and Deep Water Habitats of the United States (http://www.npwrc.usgs.gov/resource/wetlands/classwet/index.htm), together with...

Larval salamanders and channel geomorphology are indicators of hydrologic permanence in forested headwater streams

Science.gov (United States)

Regulatory agencies need rapid indicators of hydrologic permanence for jurisdictional determinations of headwater streams. Our study objective was to assess the utility of larval salamander presence and assemblage structure and habitat variables for determining stream permanence ...

Sedgeunkedunk Stream channel geometry from 2007-08-15 to 2016-03-30 (NCEI Accession 0152486)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — We are collecting stream channel geometry and bed sediment grain size distribution data at Sedgeunkedunk stream to evaluate physical habitat changes associated with...

Habitat Projects Completed within the Asotin Creek Watershed, 1999 Completion Report.

Energy Technology Data Exchange (ETDEWEB)

Johnson, Bradley J.

2000-01-01

The Asotin Creek Model Watershed Program (ACMWP) is the primary entity coordinating habitat projects on both private and public lands within the Asotin Creek watershed. The Asotin Creek watershed covers approximately 325 square miles in the Blue Mountains of southeastern Washington in WRIA 35. According to WDFW's Priority WRIA's by At-Risk Stock Significance Map, it is the highest priority in southeastern WA. Snake River spring chinook salmon, summer steelhead and bull trout, which are listed under the Endangered Species Act (ESA), are present in the watershed. The ACMWP began coordinating habitat projects in 1995. Approximately two hundred seventy-six projects have been implemented through the ACMWP as of 1999. Twenty of these projects were funded in part through Bonneville Power Administration's 1999 Columbia Basin Fish and Wildlife Program. These projects used a variety of methods to enhance and protect watershed conditions. In-stream work for fish habitat included construction of hard structures (e.g. vortex rock weirs), meander reconstruction, placement of large woody debris (LWD) and whole trees and improvements to off-channel rearing habitat; thirty-eight were created with these structures. Three miles of stream benefited from riparian improvements such as vegetative plantings (17,000 trees and shrubs) and noxious weed control. Two sediment basin constructions, 67 acres of grass seeding, and seven hundred forty-five acres of minimum till were implemented to reduce sediment production and delivery to streams in the watershed.

History and Productivity Determine the Spatial Distribution of Key Habitats for Biodiversity in Norwegian Forest Landscapes

Directory of Open Access Journals (Sweden)

Magne Sætersdal

2016-01-01

Full Text Available Retention forestry, including the retention of woodland key habitats (WKH at the forest stand scale, has become an essential management practice in boreal forests. Here, we investigate the spatial distribution of 9470 habitat patches, mapped according to the Complementary Habitat Inventory method (CHI habitats, as potential WKHs in 10 sample areas in Norway. We ask whether there are parts of the forest landscapes that have consistently low or high density of CHI habitats compared to the surveyed landscape as a whole, and therefore have a low or high degree of conflict with harvesting, respectively. We found that there was a general pattern of clumped distribution of CHI habitats at distances up to a few kilometres. Furthermore, results showed that most types of CHI habitats were approximately two to three times as common in the 25% steepest slopes, lowest altitudes and highest site indices. CHI habitats that are most common in old-growth forests were found at longer distances from roads, whereas habitats rich in deciduous trees were found at shorter distances from roads than expected. Both environmental factors and the history of human impact are needed to explain the spatial distribution of CHI habitats. The overrepresentation of WKHs in parts of the forest landscapes represents a good starting point to develop more efficient inventory methods.

Stream temperature monitoring and modeling: Recent advances and new tools for managers

Science.gov (United States)

Daniel J. Isaak

2011-01-01

Stream thermal regimes are important within regulatory contexts, strongly affect the functioning of aquatic ecosystems, and are a primary determinant of habitat suitability for many sensitive species. The diverse landscapes and topographies inherent to National Forests and Grasslands create mosaics of stream thermal conditions that are intermingled with strong...

Aquatic insect assemblages associated with subalpine stream segment types in relict glaciated headwaters

Science.gov (United States)

Kubo, Joshua S.; Torgersen, Christian E.; Bolton, Susan M.; Weekes, Anne A.; Gara, Robert I.

2013-01-01

1. Aquatic habitats and biotic assemblages in subalpine headwaters are sensitive to climate and human impacts. Understanding biotic responses to such perturbations and the contribution of high-elevation headwaters to riverine biodiversity requires the assessment of assemblage composition among habitat types. We compared aquatic insect assemblages among headwater stream segment types in relict glaciated subalpine basins in Mt. Rainier National Park, Washington, USA. 2. Aquatic insects were collected during summer and autumn in three headwater basins. In each basin, three different stream segment types were sampled: colluvial groundwater sources, alluvial lake inlets, and cascade-bedrock lake outlets. Ward's hierarchical cluster analysis revealed high β diversity in aquatic insect assemblages, and non-metric multidimensional scaling indicated that spatial and temporal patterns in assemblage composition differed among headwater stream segment types. Aquatic insect assemblages showed more fidelity to stream segment types than to individual basins, and the principal environmental variables associated with assemblage structure were temperature and substrate. 3. Indicator species analyses identified specific aquatic insects associated with each stream segment type. Several rare and potentially endemic aquatic insect taxa were present, including the recently described species, Lednia borealis (Baumann and Kondratieff). 4. Our results indicate that aquatic insect assemblages in relict glaciated subalpine headwaters were strongly differentiated among stream segment types. These results illustrate the contribution of headwaters to riverine biodiversity and emphasise the importance of these habitats for monitoring biotic responses to climate change. Monitoring biotic assemblages in high-elevation headwaters is needed to prevent the potential loss of unique and sensitive biota.

Stream fish, water and habitat quality in a pasture dominated basin, southeastern Brazil Ictiofauna de riachos, qualidade da água e do hábitat em uma bacia hidrográfica dominada por pastagens, Sudeste do Brasil

Directory of Open Access Journals (Sweden)

L. Casatti

2006-05-01

Full Text Available A fish survey in 35 stream reaches (from 1st to 3rd order with physicochemical and habitat assessment in the São José dos Dourados system, southeastern Brazil, was conducted. Most of the basin land cover (77.4% is used for pasture. From the sampled stream reaches, 24 were of good physicochemical quality, 10 of fair quality, and only one of poor quality. A habitat assessment showed that 10 stream reaches were considered fair, 22 were poor, and 3 were very poor. Fifty species were collected and their abundances showed strong correlation with habitat descriptors. In addition to the correlation between fish abundance and habitat, some species also showed optimal distribution related to the degree of physical habitat conservation. Streams located in this region experience organic pollution, but the most important aspect is the decline of the instream physical habitat condition, especially in first order streams, which negatively affects coarse substrates and water column dependent fish species. Effluent control, riparian vegetation restoration programs, siltation control and adequate sustainable soil use are practices which could mitigate such impacts.A ictiofauna de 35 trechos de riachos (de 1ª a 3ª ordem no sistema do Rio São José dos Dourados, Sudeste do Brasil, foi estudada juntamente com a avaliação físico-química e física do hábitat. Na região estudada, 77,4% do solo é utilizado para pastagens. Quanto à avaliação físico-química da água, 24 trechos foram classificados como bons, 10 como regulares e um como pobre; quanto à avaliação física do hábitat, 10 foram considerados regulares, 22 como pobres e 3 como muito pobres. Cinqüenta espécies foram coletadas e suas abundâncias apresentaram forte correlação com descritores do hábitat. Em adição a esta correlação, observou-se que algumas espécies também demonstraram sua distribuição ótima coincidente com o grau de conservação do hábitat físico. Os riachos

Diurnal stream habitat use of juvenile Atlantic salmon, brown trout and rainbow trout in winter

Science.gov (United States)

Johnson, J. H.; Douglass, K.A.

2009-01-01

The diurnal winter habitat of three species of juvenile salmonids was examined in a tributary of Skaneateles Lake, NY to compare habitat differences among species and to determine if species/age classes were selecting specific habitats. A total of 792 observations were made on the depth, velocity, substrate and cover (amount and type) used by sympatric subyearling Atlantic salmon, subyearling brown trout and subyearling and yearling rainbow trout. Subyearling Atlantic salmon occurred in shallower areas with faster velocities and less cover than the other salmonid groups. Subyearling salmon was also the only group associated with substrate of a size larger than the average size substrate in the study reach during both winters. Subyearling brown trout exhibited a preference for vegetative cover. Compared with available habitat, yearling rainbow trout were the most selective in their habitat use. All salmonid groups were associated with more substrate cover in 2002 under high flow conditions. Differences in the winter habitat use of these salmonid groups have important management implications in terms of both habitat protection and habitat enhancement.

Gender Fairness within the Force Concept Inventory

Science.gov (United States)

Traxler, Adrienne; Henderson, Rachel; Stewart, John; Stewart, Gay; Papak, Alexis; Lindell, Rebecca

2018-01-01

Research on the test structure of the Force Concept Inventory (FCI) has largely ignored gender, and research on FCI gender effects (often reported as "gender gaps") has seldom interrogated the structure of the test. These rarely crossed streams of research leave open the possibility that the FCI may not be structurally valid across…

Determination and declaration of critical nuclide inventories in Belgian NPP radwaste streams

International Nuclear Information System (INIS)

Lemmens, A.; Centner, B.; Beguin, P.; Mannaerts, K.

2001-01-01

The nuclear power plants (NPPs) managed by ELECTRABEL are located at the Doel (4 units) and the Tihange (3 units) sites and have a total capacity of 5700 MW(e). All the units are of the PWR type. Taking into account the need for retrievability and reliability of all requested waste data, the operator ELECTRABEL has subcontracted a complete study to the engineering company TRACTEBEL ENERGY ENGINEERING (TEE) in order to elaborate a computer code for the determination of critical nuclides in the different waste streams. This program should guarantee retrievability and reliability of all information related to the waste packages produced at the NPP. Two computer codes, LLWAA and DECL, have therefore been developed by TEE. The first code (LLWAA: low level waste activity assessment code), enables to predict the global inventories and/or the scaling factors of the critical nuclides in the conditioned and in the non-conditioned waste generated by the operation of a PWR. This code is site-specific as it takes into account the plant design characteristics and operating conditions. A version for BWR plants is under development. The second code 'DECL', deals mainly with the complete database management of each waste package produced in order to guarantee full retrievability. LLWAA and DECL are implemented as an integrated software package called 'DECLARE' at the sites of Doel and Tihange. Furthermore, the LLWAA-code has been extended for the determination of the critical nuclides activities in ashes produced by incineration (LLWAA-Ashes) and for the assessment of the critical nuclides activities deposited on equipment of the nuclear auxiliary systems (LLWAA-Decom). (author)

Nuclear material inventory estimation in solvent extraction contactors

International Nuclear Information System (INIS)

Beyerlein, A.; Geldard, J.

1986-06-01

This report describes the development of simple nuclear material (uranium and plutonium) inventory relations for mixer-settler solvent extraction contactors used in reprocessing spent nuclear fuels. The relations are developed for light water reactor fuels where the organic phase is 30% tri-n-butylphosphate (TBP) by volume. For reprocessing plants using mixer-settler contactors as much as 50% of the nuclear material within the contactors is contained in A type (aqueous to organic extraction) contactors. Another very significant portion of the contactor inventory is in the partitioning contactors. The stripping contactors contain a substantial uranium inventory but contain a very small plutonium inventory (about 5 to 10% of the total contactor inventory). The simplified inventory relations developed in this work for mixer-settler contactors reproduce the PUBG databases within about a 5% standard deviation. They can be formulated to explicitly show the dependence of the inventory on nuclear material concentrations in the aqueous feed streams. The dependence of the inventory on contactor volumes, phase volume ratios, and acid and TBP concentrations are implicitly contained in parameters that can be calculated for a particular reprocessing plant from nominal flow sheet data. The terms in the inventory relations that represent the larger portion of the inventory in A type and partitioning contactors can be extended to pulsed columns virtually without change

TFTR tritium inventory accountability system

International Nuclear Information System (INIS)

Saville, C.; Ascione, G.; Elwood, S.; Nagy, A.; Raftopoulos, S.; Rossmassler, R.; Stencel, J.; Voorhees, D.; Tilson, C.

1995-01-01

This paper discusses the program, PPPL (Princeton Plasma Physics Laboratory) Material Control and Accountability Plan, that has been implemented to track US Department of Energy's tritium and all other accountable source material. Specifically, this paper details the methods used to measure tritium in various systems at the Tokamak Fusion Test Reactor; resolve inventory differences; perform inventory by difference inside the Tokamak; process and measure plasma exhaust and other effluent gas streams; process, measure and ship scrap or waste tritium on molecular sieve beds; and detail organizational structure of the Material Control and Accountability group. In addition, this paper describes a Unix-based computerized software system developed at PPPL to account for all tritium movements throughout the facility. 5 refs., 2 figs

Puget Sound Intertidal Habitat Inventory; Puget Sound Ambient Monitoring Program, 1996 (NODC Accession 9900221)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Puget Sound's intertidal areas provide habitat for species of commercial, recreational, biotic, and aesthetic value. Habitat is a critical ecosystem component -- it...

Study of column construction and tritium inventory of cryogenic distillation columns for tritium plant of a fusion reactor

International Nuclear Information System (INIS)

Iwai, Yasunori; Yamanishi, Toshihiko; Okuno, Kenji

1996-11-01

Cryogenic distillation column system is believed to be best for large throughput of hydrogen isotope separation. The major disadvantage of the system is a large tritium inventory in liquid phase. From a viewpoint of safety of a fusion reactor, it is important to establish the design method of minimized the tritium inventory. Anumerical study to investigate the possible design improvement to reduce inventory while maintaining separation performance was conducted. The design conditions are based on ITER DDD report, and details are as follows, 1) Exhaust stream with less than 50 Ci/y loss of tritium, 2) 99.9% purity D2, and 3) 90% purity T2. 4) total inventory with less than 100g. In the design of ITER to process 32 mol/hr, 4 columns (3 of 4 columns make closed loop) are best and total inventory is 94g. Particularly recent design of ITER to process 320 mol/hr requires additional efforts to minimize the inventory. The simulation also suggests it is effective to reduce inventory to draw two different purity product streams. (author)

A catchment scale evaluation of multiple stressor effects in headwater streams

DEFF Research Database (Denmark)

Rasmussen, J. J.; McKnight, Ursula S.; Loinaz, Maria Christina

2013-01-01

studied 11 headwater streams in the Hove catchment in the Copenhagen region. All sites had substantial physical habitat and water quality impairments due to anthropogenic influence (intensive agriculture, urban settlements, contaminated sites and low base-flow due to water abstraction activities...... insecticides were probably essential contributors to the overall ecological impairment of these streams. Our results suggest that headwater streams should be considered in future management and mitigation plans. Catchment-based management is necessary because several anthropogenic stressors exceeded...

Walla Walla River Basin Fish Habitat Enhancement Project, 2001-2002 Annual Report.

Energy Technology Data Exchange (ETDEWEB)

Volkman, Jed; Sexton, Amy D. (Confederated Tribes of the Umatilla Indian Reservation, Pendleton, OR)

2003-04-01

In 2001, the Confederated Tribes of the Umatilla Indian Reservation (CTUIR) Fisheries Habitat Program implemented stream habitat restoration and protection efforts in the Walla Walla River Basin with funding from Bonneville Power Administration (BPA). The objective of these efforts is to protect and restore habitat critical to the recovery of weak or reintroduced populations of salmonid fish. The CTUIR has currently enrolled six properties into this program: two on Couse Creek, two adjacent properties on Blue Creek, one on Patit Creek, and one property on the mainstem Walla Walla River. Since 1997, approximately 7 miles of critical salmonid habitat has been secured for restoration and protection under this project. Major accomplishments to date include the following: Secured approximately $250,000 in cost share; Secured 7 easements; Planted 30,000+ native plants; Installed 50,000+ cuttings; and Seeded 18 acres to native grass. Pre and post-project monitoring efforts were included for all projects, incorporating methodologies from CTUIR's Draft Monitoring Plan. Basin-wide monitoring also included the deployment of 6 thermographs to collect summer stream temperatures.

Orchids inventory in Sintang Regency, West Kalimantan

Directory of Open Access Journals (Sweden)

ESTI ENDAH ARIYANTI

2008-10-01

Full Text Available Orchid is one of ornamental plants which have commercial value. Therefore most species are becoming threatened or even endangered because of over exploitation. In addition, its natural habitat is also decreasing. Conservation must be done urgently, both by in situ and ex situ conservation, which can be started by orchid inventory. The orchid inventory was done in TWA Bukit Kelam, TWA Baning and several places in Regency of Sintang, West Kalimantan. The result showed that there were 40 species belonged to 27 genera, which 32 species of them (20 genera were epiphytic orchids and 8 species (7 genera were terrestrial orchids.

Influence of discharge on fish habitat suitability curves in mountain watercourses in IFIM methodology

Directory of Open Access Journals (Sweden)

Macura Viliam

2018-03-01

Full Text Available In this study, the quality of the aquatic habitats of mountain and piedmont streams was evaluated using the ‘Instream Flow Incremental Methodology (IFIM’ decision-making tool. The quality of habitats was interpreted from the behaviour of bioindicators in the form of habitat suitability curves (HSCs. From 1995 until the present, 59 different reaches of 43 mountain streams in Slovakia and 3 validation reaches were evaluated, and the results analysed. The aim of this study was to generalize the parameters of the HSCs for the brown trout. The generalized curves will be useful for water management planning. It is difficult and time-consuming to take hydrometrical and ichthyological measurements at different water levels. Therefore, we developed a methodology for modifying suitability curves based on an ichthyological survey during a low flow and a flow at which fish lose the ability to resist the flow velocity. The study provides the information how such curves can be modified for a wider flow range. In summary, this study shows that generalized HSCs provide representative data that can be used to support both the design of river restoration and the assessment of the impacts of the water use or of climate change on stream habitat quality.

The scales of variability of stream fish assemblage at tributary confluences

Directory of Open Access Journals (Sweden)

István Czeglédi

2015-12-01

Full Text Available Tributary confluences play an important role in the dispersal of organisms, and consequently, in shaping regional scale diversity in stream networks. Despite their importance in dispersal processes, little is known about how ecological assemblages are organized in these habitats. We studied the scales of variability of stream fish assemblages over three seasons using a hierarchical sampling design, which incorporated three tributaries, three sites at the mouth of each tributary and using four sampling units at each site. We found strong scale dependent variability in species richness, composition and relative abundance. Most of the variation was accounted for by the interactive effect of season, between stream and between site effects, while habitat structure of the sampling units had a relatively minor role. Species richness showed a continuous decrease from the mainstem river in most cases, while species composition and relative abundance changed less consistently along the longitudinal profile. Consequently, we found that not only the junctions presented a strong filter on the species pool, but some species were filtered out if they passed this critical habitat bottleneck. Spatial position of the tributaries along the river also contributed to assemblage variability in the confluences. Overall, our results suggest high variability in fish assemblages across multiple scales at tributary confluences. Environmental management should take a more critical care on the filtering role of tributary confluences in species dispersal, for better understanding patterns and processes in the branches of dendritic stream networks.

Spatial Scaling of Environmental Variables Improves Species-Habitat Models of Fishes in a Small, Sand-Bed Lowland River.

Directory of Open Access Journals (Sweden)

Johannes Radinger

Full Text Available Habitat suitability and the distinct mobility of species depict fundamental keys for explaining and understanding the distribution of river fishes. In recent years, comprehensive data on river hydromorphology has been mapped at spatial scales down to 100 m, potentially serving high resolution species-habitat models, e.g., for fish. However, the relative importance of specific hydromorphological and in-stream habitat variables and their spatial scales of influence is poorly understood. Applying boosted regression trees, we developed species-habitat models for 13 fish species in a sand-bed lowland river based on river morphological and in-stream habitat data. First, we calculated mean values for the predictor variables in five distance classes (from the sampling site up to 4000 m up- and downstream to identify the spatial scale that best predicts the presence of fish species. Second, we compared the suitability of measured variables and assessment scores related to natural reference conditions. Third, we identified variables which best explained the presence of fish species. The mean model quality (AUC = 0.78, area under the receiver operating characteristic curve significantly increased when information on the habitat conditions up- and downstream of a sampling site (maximum AUC at 2500 m distance class, +0.049 and topological variables (e.g., stream order were included (AUC = +0.014. Both measured and assessed variables were similarly well suited to predict species' presence. Stream order variables and measured cross section features (e.g., width, depth, velocity were best-suited predictors. In addition, measured channel-bed characteristics (e.g., substrate types and assessed longitudinal channel features (e.g., naturalness of river planform were also good predictors. These findings demonstrate (i the applicability of high resolution river morphological and instream-habitat data (measured and assessed variables to predict fish presence, (ii the

The role of the geophysical template and environmental regimes in controlling stream-living trout populations

Science.gov (United States)

Penaluna, Brooke E.; Railsback, Steve F.; Dunham, Jason B.; Johnson, S.; Bilby, Richard E.; Skaugset, Arne E.

2015-01-01

The importance of multiple processes and instream factors to aquatic biota has been explored extensively, but questions remain about how local spatiotemporal variability of aquatic biota is tied to environmental regimes and the geophysical template of streams. We used an individual-based trout model to explore the relative role of the geophysical template versus environmental regimes on biomass of trout (Oncorhynchus clarkii clarkii). We parameterized the model with observed data from each of the four headwater streams (their local geophysical template and environmental regime) and then ran 12 simulations where we replaced environmental regimes (stream temperature, flow, turbidity) of a given stream with values from each neighboring stream while keeping the geophysical template fixed. We also performed single-parameter sensitivity analyses on the model results from each of the four streams. Although our modeled findings show that trout biomass is most responsive to changes in the geophysical template of streams, they also reveal that biomass is restricted by available habitat during seasonal low flow, which is a product of both the stream’s geophysical template and flow regime. Our modeled results suggest that differences in the geophysical template among streams render trout more or less sensitive to environmental change, emphasizing the importance of local fish–habitat relationships in streams.

Sampling the stream landscape: Improving the applicability of an ecoregion-level capture probability model for stream fishes

Science.gov (United States)

Mollenhauer, Robert; Mouser, Joshua B.; Brewer, Shannon K.

2018-01-01

Temporal and spatial variability in streams result in heterogeneous gear capture probability (i.e., the proportion of available individuals identified) that confounds interpretation of data used to monitor fish abundance. We modeled tow-barge electrofishing capture probability at multiple spatial scales for nine Ozark Highland stream fishes. In addition to fish size, we identified seven reach-scale environmental characteristics associated with variable capture probability: stream discharge, water depth, conductivity, water clarity, emergent vegetation, wetted width–depth ratio, and proportion of riffle habitat. The magnitude of the relationship between capture probability and both discharge and depth varied among stream fishes. We also identified lithological characteristics among stream segments as a coarse-scale source of variable capture probability. The resulting capture probability model can be used to adjust catch data and derive reach-scale absolute abundance estimates across a wide range of sampling conditions with similar effort as used in more traditional fisheries surveys (i.e., catch per unit effort). Adjusting catch data based on variable capture probability improves the comparability of data sets, thus promoting both well-informed conservation and management decisions and advances in stream-fish ecology.

A multigear protocol for sampling crayfish assemblages in Gulf of Mexico coastal streams

Science.gov (United States)

William R. Budnick; William E. Kelso; Susan B. Adams; Michael D. Kaller

2018-01-01

Identifying an effective protocol for sampling crayfish in streams that vary in habitat and physical/chemical characteristics has proven problematic. We evaluated an active, combined-gear (backpack electrofishing and dipnetting) sampling protocol in 20 Coastal Plain streams in Louisiana. Using generalized linear models and rarefaction curves, we evaluated environmental...

Methods for evaluating riparian habitats with applications to management

Science.gov (United States)

Platts, William S.; Armour, C.L.; Booth, G.D.; Bryant, M.; Bufford, J.L.; Cuplin, P.; Jensen, S.; Lienkaemper, G.W.; Minshall, G.W.; Monsen, S.T.; Nelson, R.L.; Sedell, J.R.; Tuhy, J.S.

1987-01-01

Riparian area planning and management is a major national issues today--something that should have been the case a century ago. A century of additive effects of land use has resulted in major impacts on many riparian stream habitats and their fisheries, wildlife, and domestic livestock use. Before scientists can evaluate the influences of various land and water uses on riparian environments, they must first understand these environments. This means being able to detect and measure with confidence the natural and artificial variation and instantaneous conditions of the riparian habitat. These conditions must then be related to the production capability of riparian habitat and any extraneous factors affecting this production potential.

Sediment denitrification and nitrification is enhanced by the presence of macrophytes in a restored agricultural stream, Black Earth Creek, WI USA

Science.gov (United States)

Restoration of habitats that support microbial processing can enhance nitrate removal in agricultural streams. Macrophytes are common both in-stream and in the wetted fringe of agricultural stream systems, but are often removed in restoration to increase stream velocity or stabil...

Dam operations may improve aquatic habitat and offset negative effects of climate change.

Science.gov (United States)

Benjankar, Rohan; Tonina, Daniele; McKean, James A; Sohrabi, Mohammad M; Chen, Quiwen; Vidergar, Dmitri

2018-05-01

Dam operation impacts on stream hydraulics and ecological processes are well documented, but their effect depends on geographical regions and varies spatially and temporally. Many studies have quantified their effects on aquatic ecosystem based mostly on flow hydraulics overlooking stream water temperature and climatic conditions. Here, we used an integrated modeling framework, an ecohydraulics virtual watershed, that links catchment hydrology, hydraulics, stream water temperature and aquatic habitat models to test the hypothesis that reservoir management may help to mitigate some impacts caused by climate change on downstream flows and temperature. To address this hypothesis we applied the model to analyze the impact of reservoir operation (regulated flows) on Bull Trout, a cold water obligate salmonid, habitat, against unregulated flows for dry, average, and wet climatic conditions in the South Fork Boise River (SFBR), Idaho, USA. Copyright © 2018 Elsevier Ltd. All rights reserved.

Habitat use and movement of the endangered Arroyo Toad (Anaxyrus californicus) in coastal southern California

Science.gov (United States)

Gallegos, Elizabeth; Lyren, Lisa M.; Lovich, Robert E.; Mitrovich, Milan J.; Fisher, Robert N.

2011-01-01

Information on the habitat use and movement patterns of Arroyo Toads (Anaxyrus californicus) is limited. The temporal and spatial characteristics of terrestrial habitat use, especially as it relates to upland use in coastal areas of the species' range, are poorly understood. We present analyses of radiotelemetry data from 40 individual adult toads tracked at a single site in coastal southern California from March through November of 2004. We quantify adult Arroyo Toad habitat use and movements and interpret results in the context of their life history. We show concentrated activity by both male and female toads along stream terraces during and after breeding, and, although our fall sample size is low, the continued presence of adult toads in the floodplain through the late fall. Adult toads used open sandy flats with sparse vegetation. Home-range size and movement frequency varied as a function of body mass. Observed spatial patterns of movement and habitat use both during and outside of the breeding period as well as available climatological data suggest that overwintering of toads in floodplain habitats of near-coastal areas of southern California may be more common than previously considered. If adult toads are not migrating out of the floodplain at the close of the breeding season but instead overwinter on stream terraces in near-coastal areas, then current management practices that assume toad absence from floodplain habitats may be leaving adult toads over-wintering on stream terraces vulnerable to human disturbance during a time of year when Arroyo Toad mortality is potentially highest.

Instream flow characterization of upper Salmon River Basin streams, Central Idaho, 2003

Science.gov (United States)

Maret, Terry R.; Hortness, Jon E.; Ott, Douglas S.

2004-01-01

Anadromous fish populations in the Columbia River Basin have plummeted in the last 100 years. This severe decline led to Federal listing of chinook salmon (Oncorhynchus tshawytscha) and steelhead trout (Oncorhynchus mykiss) stocks as endangered or threatened under the Endangered Species Act (ESA) in the 1990s. Historically, the upper Salmon River Basin (upstream from the confluence with the Pahsimeroi River) in Idaho provided migration corridors and significant habitat for these ESA-listed species, in addition to the federally listed bull trout (Salvelinus confluentus). Human development has modified the original streamflow conditions in many streams in the upper Salmon River Basin. Summer streamflow modifications, as a result of irrigation practices, have directly affected the quantity and quality of fish habitat and also have affected migration and (or) access to suitable spawning and rearing habitat for these fish. As a result of these ESA listings and Action 149 of the Federal Columbia River Power System Biological Opinion of 2000, the Bureau of Reclamation was tasked to conduct streamflow characterization studies in the upper Salmon River Basin to clearly define habitat requirements for effective species management and habitat restoration. These studies include the collection of habitat and streamflow information for the Physical Habitat Simulation (PHABSIM) model, a widely applied method to determine relations between habitat and discharge requirements for various fish species and life stages. Model results can be used by resource managers to guide habitat restoration efforts in the evaluation of potential fish habitat and passage improvements by increasing streamflow. Instream flow characterization studies were completed on Pole, Fourth of July, Elk, and Valley Creeks during 2003. Continuous streamflow data were collected upstream from all diversions on each stream. In addition, natural summer streamflows were estimated for each study site using regression

Sedgeunkedunk stream bed sediment particle diameter from 2007-08-15 to 2016-03-30 (NCEI Accession 0152487)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — We are collecting stream channel geometry and bed sediment grain size distribution data at Sedgeunkedunk stream to evaluate physical habitat changes associated with...

Stream Classification Tool User Manual: For Use in Applications in Hydropower-Related Evironmental Mitigation

Energy Technology Data Exchange (ETDEWEB)

McManamay, Ryan A. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Troia, Matthew J. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); DeRolph, Christopher R. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Samu, Nicole M. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)

2016-01-01

Stream classifications are an inventory of different types of streams. Classifications help us explore similarities and differences among different types of streams, make inferences regarding stream ecosystem behavior, and communicate the complexities of ecosystems. We developed a nested, layered, and spatially contiguous stream classification to characterize the biophysical settings of stream reaches within the Eastern United States (~ 900,000 reaches). The classification is composed of five natural characteristics (hydrology, temperature, size, confinement, and substrate) along with several disturbance regime layers, and each was selected because of their relevance to hydropower mitigation. We developed the classification at the stream reach level using the National Hydrography Dataset Plus Version 1 (1:100k scale). The stream classification is useful to environmental mitigation for hydropower dams in multiple ways. First, it creates efficiency in the regulatory process by creating an objective and data-rich means to address meaningful mitigation actions. Secondly, the SCT addresses data gaps as it quickly provides an inventory of hydrology, temperature, morphology, and ecological communities for the immediate project area, but also surrounding streams. This includes identifying potential reference streams as those that are proximate to the hydropower facility and fall within the same class. These streams can potentially be used to identify ideal environmental conditions or identify desired ecological communities. In doing so, the stream provides some context for how streams may function, respond to dam regulation, and an overview of specific mitigation needs. Herein, we describe the methodology in developing each stream classification layer and provide a tutorial to guide applications of the classification (and associated data) in regulatory settings, such as hydropower (re)licensing.

Hydroelectric plant turbine, stream and spillway flow measurement

Energy Technology Data Exchange (ETDEWEB)

Lampa, J.; Lemon, D.; Buermans, J. [ASL AQ Flow Inc., Sidney, BC (Canada)

2004-07-01

This presentation provided schematics of the turbine flow measurements and typical bulb installations at the Kootenay Canal and Wells hydroelectric power facilities in British Columbia. A typical arrangement for measuring stream flow using acoustic scintillation was also illustrated. Acoustic scintillation is portable, non-intrusive, suitable for short intakes, requires minimal maintenance and is cost effective and accurate. A comparison between current meters and acoustic scintillation was also presented. Stream flow measurement is valuable in evaluating downstream areas that are environmentally important for fish habitat. Stream flow measurement makes it possible to define circulation. The effects of any changes can be assessed by combining field measurements and numerical modelling. The presentation also demonstrated that computational fluid dynamics modelling appears promising in determining stream flow and turbulent flow at spillways. tabs., figs.

Effects of Management Legacies on Stream Fish and Aquatic Benthic Macroinvertebrate Assemblages

Science.gov (United States)

Quist, Michael C.; Schultz, Randall D.

2014-09-01

Fish and benthic macroinvertebrate assemblages often provide insight on ecological conditions for guiding management actions. Unfortunately, land use and management legacies can constrain the structure of biotic communities such that they fail to reflect habitat quality. The purpose of this study was to describe patterns in fish and benthic macroinvertebrate assemblage structure, and evaluate relationships between biota and habitat characteristics in the Chariton River system of south-central Iowa, a system likely influenced by various potential management legacies (e.g., dams, chemical removal of fishes). We sampled fishes, benthic macroinvertebrates, and physical habitat from a total of 38 stream reaches in the Chariton River watershed during 2002-2005. Fish and benthic macroinvertebrate assemblages were dominated by generalist species tolerant of poor habitat quality; assemblages failed to show any apparent patterns with regard to stream size or longitudinal location within the watershed. Metrics used to summarize fish assemblages and populations [e.g., presence-absence, relative abundance, Index of Biotic Integrity for fish (IBIF)] were not related to habitat characteristics, except that catch rates of piscivores were positively related to the depth and the amount of large wood. In contrast, family richness of benthic macroinvertebrates, richness of Ephemeroptera, Trichoptera, and Plecoptera taxa, and IBI values for benthic macroinvertebrates (IBIBM) were positively correlated with the amount of overhanging vegetation and inversely related to the percentage of fine substrate. A long history of habitat alteration by row-crop agriculture and management legacies associated with reservoir construction has likely resulted in a fish assemblage dominated by tolerant species. Intolerant and sensitive fish species have not recolonized streams due to downstream movement barriers (i.e., dams). In contrast, aquatic insect assemblages reflected aquatic habitat, particularly

Streams in the urban heat island: spatial and temporal variability in temperature

Science.gov (United States)

Somers, Kayleigh A.; Bernhardt, Emily S.; Grace, James B.; Hassett, Brooke A.; Sudduth, Elizabeth B.; Wang, Siyi; Urban, Dean L.

2013-01-01

Streams draining urban heat islands tend to be hotter than rural and forested streams at baseflow because of warmer urban air and ground temperatures, paved surfaces, and decreased riparian canopy. Urban infrastructure efficiently routes runoff over hot impervious surfaces and through storm drains directly into streams and can lead to rapid, dramatic increases in temperature. Thermal regimes affect habitat quality and biogeochemical processes, and changes can be lethal if temperatures exceed upper tolerance limits of aquatic fauna. In summer 2009, we collected continuous (10-min interval) temperature data in 60 streams spanning a range of development intensity in the Piedmont of North Carolina, USA. The 5 most urbanized streams averaged 21.1°C at baseflow, compared to 19.5°C in the 5 most forested streams. Temperatures in urban streams rose as much as 4°C during a small regional storm, whereas the same storm led to extremely small to no changes in temperature in forested streams. Over a kilometer of stream length, baseflow temperature varied by as much as 10°C in an urban stream and as little as 2°C in a forested stream. We used structural equation modeling to explore how reach- and catchment-scale attributes interact to explain maximum temperatures and magnitudes of storm-flow temperature surges. The best predictive model of baseflow temperatures (R2  =  0.461) included moderately strong pathways directly (extent of development and road density) and indirectly, as mediated by reach-scale factors (canopy closure and stream width), from catchment-scale factors. The strongest influence on storm-flow temperature surges appeared to be % development in the catchment. Reach-scale factors, such as the extent of riparian forest and stream width, had little mitigating influence (R2  =  0.448). Stream temperature is an essential, but overlooked, aspect of the urban stream syndrome and is affected by reach-scale habitat variables, catchment-scale urbanization

Estimating thermal regimes of bull trout and assessing the potential effects of climate warming on critical habitats

Science.gov (United States)

Jones, Leslie A.; Muhlfeld, Clint C.; Marshall, Lucy A.; McGlynn, Brian L.; Kershner, Jeffrey L.

2013-01-01

Understanding the vulnerability of aquatic species and habitats under climate change is critical for conservation and management of freshwater systems. Climate warming is predicted to increase water temperatures in freshwater ecosystems worldwide, yet few studies have developed spatially explicit modelling tools for understanding the potential impacts. We parameterized a nonspatial model, a spatial flow-routed model, and a spatial hierarchical model to predict August stream temperatures (22-m resolution) throughout the Flathead River Basin, USA and Canada. Model comparisons showed that the spatial models performed significantly better than the nonspatial model, explaining the spatial autocorrelation found between sites. The spatial hierarchical model explained 82% of the variation in summer mean (August) stream temperatures and was used to estimate thermal regimes for threatened bull trout (Salvelinus confluentus) habitats, one of the most thermally sensitive coldwater species in western North America. The model estimated summer thermal regimes of spawning and rearing habitats at <13 C° and foraging, migrating, and overwintering habitats at <14 C°. To illustrate the useful application of such a model, we simulated climate warming scenarios to quantify potential loss of critical habitats under forecasted climatic conditions. As air and water temperatures continue to increase, our model simulations show that lower portions of the Flathead River Basin drainage (foraging, migrating, and overwintering habitat) may become thermally unsuitable and headwater streams (spawning and rearing) may become isolated because of increasing thermal fragmentation during summer. Model results can be used to focus conservation and management efforts on populations of concern, by identifying critical habitats and assessing thermal changes at a local scale.

Using a Numerical Model to Assess the Geomorphic Impacts of Forest Management Scenarios on Streams

Science.gov (United States)

Davidson, S. L.; Eaton, B. C.

2014-12-01

In-stream large wood governs the morphology of many small to intermediate streams, while riparian vegetation influences bank strength and channel pattern. Forest management practices such as harvesting and fire suppression therefore dramatically influence channel processes and associated aquatic habitat. The primary objective of this research is to compare the impacts of three common forest scenarios - natural fire disturbance, forest harvesting with a riparian buffer, and fire suppression - on the volume of in-channel wood and the complexity of aquatic habitat in channels at a range of scales. Each scenario is explored through Monte Carlo simulations run over a period of 1000 years using a numerical reach scale channel simulator (RSCS), with variations in tree toppling rate and forest density used to represent each forest management trajectory. The habitat complexity associated with each scenario is assessed based on the area of the bed occupied by pools and spawning sized sediment, the availability of wood cover, and the probability of avulsion. Within the fire scenario, we also use the model to separately investigate the effects of root decay and recovery on equilibrium channel geometry by varying the rooting depth and associated bank strength through time. The results show that wood loading and habitat complexity are influenced by the timing and magnitude of wood recruitment, as well as channel scale. The forest harvesting scenario produces the lowest wood loads and habitat complexity so long as the buffer width is less than the average mature tree height. The natural fire cycle produces the greatest wood loading and habitat complexity, but also the greatest variability because these streams experience significant periods without wood recruitment as forests regenerate. In reaches that experience recurrent fires, width increases in the post-fire period as roots decay, at times producing a change in channel pattern when a threshold width to depth ratio is

How climate change will affect sessile stages of brown trout (Salmo trutta) in mountain streams of the Iberian Peninsula

Science.gov (United States)

Santiago, José M.; Alonso, Carlos; García de Jalón, Diego; Solana, Joaquín

2017-04-01

Streamflow and temperature regimes are determinant for the availability of suitable physical habitat for instream biological communities. Iberian brown trout (Salmo trutta) populations live in a climatic border in which summer water scarcity and raising temperatures will compromise their viability throughout the current century. Due to their impaired mobility, sessile stages of trout life cycle (i.e. eggs and larvae) are among the most sensitive organisms to environmental changing conditions. At a given spawning redd, thermal habitat is limited by the length of the period at which suitable temperatures occur. At the same time, suitable physical habitat is limited by the instream flow regime during spawning and incubation of eggs and larvae. Temperature and flow do also interact, thus producing synergistic effects on both physical and thermal habitats. This study is aimed at quantitatively predicting thermal and physical habitat loss for the sessile stages of brown trout life cycle due to clime change, in mountain streams at the rear edge of the species natural distribution using high-resolution spatial-temporal simulations of the thermal and physical habitat. Two streams of Central Spain have been studied (Cega and Lozoya streams). Daily temperature and flow data from ad hoc downscaled IPCC (RCP4.5 and RCP8.5) predictions were used as input variables. Physical habitat changes were simulated from previously predicted stream flow data by means of hydraulic simulation tools (River2D). By taking into account the thermal tolerance limits and the proportion of lost physical habitat, limiting factors for the reproduction of brown trout in the study area were determined. The general increase of mean temperatures shortens the duration of the early developmental stages. This reduction of the sessile period is rather similar in both RCP4.5 and RCP8.5 scenarios by 2050. Differences between both scenarios become greater by 2099. The duration of sessile developmental is reduced

An inventory model with dependent product demands and returns

NARCIS (Netherlands)

Kiesmüller, G.P.; Laan, van der E.P.

2001-01-01

In this paper an inventory model for a single reusable product is investigated, in which the random returns depend explicitly on the demand stream. Further, the model distinguishes itself from most other research in this field by considering leadtimes and a finite planning horizon. We show that

Multiple stress response of lowland stream benthic macroinvertebrates is dependent on habitat type

DEFF Research Database (Denmark)

Graeber, Daniel; Jensen, Tinna M.; Rasmussen, Jes

2017-01-01

Worldwide, lowland stream ecosystems are exposed to multiple anthropogenic stress due to the combination of water scarcity, eutrophication and fine sedimentation. The understanding of the effects of such multiple stress on stream benthic macroinvertebrates has been growing in the recent years...

1993 Northern goshawk inventory on portions of Los Alamos National Laboratory, Los Alamos, NM. Final report

Energy Technology Data Exchange (ETDEWEB)

Sinton, D.T.; Kennedy, P.L. [Colorado State Univ., Fort Collins, CO (United States). Dept. of Fishery and Wildlife Biology

1994-06-01

Northern goshawks (Accipiter gentilis) (hereafter referred to as goshawk) is a large forest dwelling hawk. Goshawks may be declining in population and reproduction in the southwestern United States. Reasons for the possible decline in goshawk populations include timber harvesting resulting in the loss of nesting habitat, toxic chemicals, and the effects of drought, fire, and disease. Thus, there is a need to determine their population status and assess impacts of management activities in potential goshawk habitat. Inventory for the goshawk was conducted on 2,254 ha of Los Alamos National Laboratory (LANL) to determine the presence of nesting goshawks on LANL lands. This information can be incorporated into LANL`s environmental management program. The inventory was conducted by Colorado State University personnel from May 12 to July 30, 1993. This report summarizes the results of this inventory.

78 FR 56505 - Endangered and Threatened Wildlife and Plants; Designation of Critical Habitat for Georgia Rockcress

Science.gov (United States)

2013-09-12

... habitat; mining activities; or introduction of invasive species that compete directly with Georgia..., elevation, topography, geologic formations, streams, and current land uses. In this way, we determined that... evaluated the topography, soils, geology, and canopy cover to identify intact habitat that could buffer...

Stream permanence influences crayfish occupancy and abundance in the Ozark Highlands, USA

Science.gov (United States)

Yarra, Allyson N.; Magoulick, Daniel D.

2018-01-01

Crayfish use of intermittent streams is especially important to understand in the face of global climate change. We examined the influence of stream permanence and local habitat on crayfish occupancy and species densities in the Ozark Highlands, USA. We sampled in June and July 2014 and 2015. We used a quantitative kick–seine method to sample crayfish presence and abundance at 20 stream sites with 32 surveys/site in the Upper White River drainage, and we measured associated local environmental variables each year. We modeled site occupancy and detection probabilities with the software PRESENCE, and we used multiple linear regressions to identify relationships between crayfish species densities and environmental variables. Occupancy of all crayfish species was related to stream permanence. Faxonius meeki was found exclusively in intermittent streams, whereas Faxonius neglectus and Faxonius luteushad higher occupancy and detection probability in permanent than in intermittent streams, and Faxonius williamsi was associated with intermittent streams. Estimates of detection probability ranged from 0.56 to 1, which is high relative to values found by other investigators. With the exception of F. williamsi, species densities were largely related to stream permanence rather than local habitat. Species densities did not differ by year, but total crayfish densities were significantly lower in 2015 than 2014. Increased precipitation and discharge in 2015 probably led to the lower crayfish densities observed during this year. Our study demonstrates that crayfish distribution and abundance is strongly influenced by stream permanence. Some species, including those of conservation concern (i.e., F. williamsi, F. meeki), appear dependent on intermittent streams, and conservation efforts should include consideration of intermittent streams as an important component of freshwater biodiversity.

Riparian landscapes: Linking geodiversity with habitat and biodiversity

Science.gov (United States)

Chmieleski, Jana; Danzeisen, Laura

2017-04-01

Keywords: Oder valley, biodiversity, geodiversity River landscapes of all scales originally showed a high diversity of structures and habitats at a small spatial entity, such as the stream beds, terrasses, sand and gravel banks. This variety, with a lot of different elements, patches and patterns, represents not only a variety of geoelements or geomorhological features but also a large biodiversity, both of habitats and species. Riparian landscapes are both, a natural as well as a geoheritage, often even a cultural heritage (sustainabe land use practices). Embankments, utilization for agriculture, constructions for navigation, management measures lead to a strong loss of these structures. This impacts the value of the landscape as well ecosystem functions, not only the biodiversity and the geodiversity but also the recreation function or the aesthetic values. A case study from the National Park Lower Oder Valley in the Northeastern part of Germany, wich is also part of a Geopark („Eiszeitland am Oderrand") presents the connections of the diversity of geomorphological features with biodiversity and shows the loss of features (loss of values) due to intensive utilisation by using GIS-analysis and landscape-metrics. The Northern part of the Oder valley (National Park, transnational protection area of Germany and Poland) have been modified by man since centuries but even so remained in near-natural state that allows semi-(natural) stream dynamics. While the Oder's reparian zone is marked by the stream itself, by its bayous, reed beds, periodically flooded wet meadows and by its natural riparian forest the mineral morainic plateaus are marked by semi-natural forests and dry grasslands. Two areas of different degradation states, a) near-natural and wilderness area and b) grassland area will be compared in order to identify: quantity and extent of features, relation of measure and coverage, connectivity with other features, quantity and types of habitats (with

The development of stream temperature model in a mountainous river of Taiwan.

Science.gov (United States)

Tung, Ching-Pin; Lee, Tsung-Yu; Huang, Jr-Chuang; Perng, Po-Wen; Kao, Shih-Ji; Liao, Lin-Yen

2014-11-01

Formosan landlocked salmon is an endangered species and is very sensitive to stream temperature change. This study attempts to improve a former stream temperature model (STM) which was developed for the salmon's habitat to simulate stream temperature more realistically. Two modules, solar radiation modification (SRM) and surface/subsurface runoff mixing (RM), were incorporated to overcome the limitation of STM designed only for clear-sky conditions. It was found that daily temperature difference is related to cloud cover and can be used to adjust the effects of cloud cover on incident solar radiation to the ground level. The modified model (STM + SRM) improved the simulation during a baseflow period in both winter and summer with the Nash-Sutcliffe efficiency coefficient improved from 0.37 (by STM only) to 0.71 for the winter and from -0.18 to 0.70 for the summer. On the days with surface/subsurface runoff, the incorporation of the two new modules together (STM + SRM + RM) improved the Nash-Sutcliffe efficiency coefficient from 0.00 to 0.65 and from 0.29 to 0.83 in the winter and the summer, respectively. Meanwhile, the contributions of major thermal sources to stream temperature changes were identified. Groundwater is a major controlling factor for regulating seasonal changes of stream temperature while solar radiation is the primary factor controlling daily stream temperature variations. This study advanced our understanding on short-term stream temperature variation, which could be useful for the authorities to restore the salmon's habitat.

Habitat assessment of non-wadeable rivers in Michigan.

Science.gov (United States)

Wilhelm, Jennifer G O; Allan, J David; Wessell, Kelly J; Merritt, Richard W; Cummins, Kenneth W

2005-10-01

Habitat evaluation of wadeable streams based on accepted protocols provides a rapid and widely used adjunct to biological assessment. However, little effort has been devoted to habitat evaluation in non-wadeable rivers, where it is likely that protocols will differ and field logistics will be more challenging. We developed and tested a non-wadeable habitat index (NWHI) for rivers of Michigan, where non-wadeable rivers were defined as those of order >or=5, drainage area >or=1600 km2, mainstem lengths >or=100 km, and mean annual discharge >or=15 m3/s. This identified 22 candidate rivers that ranged in length from 103 to 825 km and in drainage area from 1620 to 16,860 km2. We measured 171 individual habitat variables over 2-km reaches at 35 locations on 14 rivers during 2000-2002, where mean wetted width was found to range from 32 to 185 m and mean thalweg depth from 0.8 to 8.3 m. We used correlation and principal components analysis to reduce the number of variables, and examined the spatial pattern of retained variables to exclude any that appeared to reflect spatial location rather than reach condition, resulting in 12 variables to be considered in the habitat index. The proposed NWHI included seven variables: riparian width, large woody debris, aquatic vegetation, bottom deposition, bank stability, thalweg substrate, and off-channel habitat. These variables were included because of their statistical association with independently derived measures of human disturbance in the riparian zone and the catchment, and because they are considered important in other habitat protocols or to the ecology of large rivers. Five variables were excluded because they were primarily related to river size rather than anthropogenic disturbance. This index correlated strongly with indices of disturbance based on the riparian (adjusted R2 = 0.62) and the catchment (adjusted R2 = 0.50), and distinguished the 35 river reaches into the categories of poor (2), fair (19), good (13), and

Barriers, invasion, and conservation of native salmonids in coldwater streams [Box 18.2

Science.gov (United States)

Bruce Rieman; Michael Young; Kurt Fausch; Jason Dunham; Douglas Peterson

2010-01-01

Habitat loss and fragmentation are threats to persistence of many native fish populations. Invading nonnative species that may restrict or displace native species are also important. These two issues are particularly relevant for native salmonids that are often limited to remnant habitats in cold, headwater streams. On the surface, reversing threats to native fishes...

Installation and early operation of a complex low inventory cryogenic distillation system for the Princeton TFTR

International Nuclear Information System (INIS)

Busigin, A.; Busigin, C.J.; Robins, J.R.; Woodall, K.B.; Bellamy, D.G.; Fong, C.; Kalyanam, K.; Sood, S.K.

1995-01-01

A low inventory Tritium Purification System (TPS) has just been installed at the Princeton Plasma Physics Laboratory (PPPL). The TPS was designed specifically for PPPL, based on their specifications for exhaust gases. The generic design, however, can easily be modified to accept a large variety of input conditions. The Princeton system is designed to have a total tritium inventory of approximately 0.5 g while producing pure product streams consisting of H 2 , D 2 , and T 2 . The purpose of the system is to separate and recycle unburnt tritium from the TFTR and to produce hydrogen and deuterium streams that are free of tritium. These streams can be disposed by stacking, thus eliminating the need to create large volume waste streams that are contaminated with tritium and that must be managed for permanent disposal. This paper will discuss the installation, the modifications and preliminary results of operation of this system at Princeton. 2 refs., 3 figs

Effects of timber harvest on aquatic vertebrates and habitat in the North Fork Caspar Creek

Science.gov (United States)

Rodney J. Nakamoto

1998-01-01

I examined the relationships between timber harvest, creek habitat, and vertebrate populations in the North and South forks of Caspar Creek. Habitat inventories suggested pool availability increased after the onset of timber harvest activities. Increased large woody debris in the channel was associated with an increase in the frequency of blowdown in the riparian...

Radioactive contamination of fishes in lake and streams impacted by the Fukushima nuclear power plant accident

International Nuclear Information System (INIS)

Yoshimura, Mayumi; Yokoduka, Tetsuya

2014-01-01

The Fukushima Daiichi Nuclear Power Plant (FDNPP) accident in March 2011 emitted radioactive substances into the environment, contaminating a wide array of organisms including fishes. We found higher concentrations of radioactive cesium ( 137 Cs) in brown trout (Salmo trutta) than in rainbow trout (Oncorhynchus nerka), and 137 Cs concentrations in brown trout were higher in a lake than in a stream. Our analyses indicated that these differences were primarily due to differences in diet, but that habitat also had an effect. Radiocesium concentrations ( 137 Cs) in stream charr (Salvelinus leucomaenis) were higher in regions with more concentrated aerial activity and in older fish. These results were also attributed to dietary and habitat differences. Preserving uncontaminated areas by remediating soils and releasing uncontaminated fish would help restore this popular fishing area but would require a significant effort, followed by a waiting period to allow activity concentrations to fall below the threshold limits for consumption. - Highlight: • Concentration of 137 Cs in brown trout was higher than in rainbow trout. • 137 Cs concentration of brown trout in a lake was higher than in a stream. • 137 Cs concentration of stream charr was higher in region with higher aerial activity. • Concentration of 137 Cs in stream charr was higher in older fish. • Difference of contamination among fishes was due to difference in diet and habitat

Channel unit use by Smallmouth Bass: Do land-use constraints or quantity of habitat matter?

Science.gov (United States)

Brewer, Shannon K.

2013-01-01

I examined how land use influenced the distribution of Smallmouth Bass Micropterus dolomieu in channel units (discrete morphological features—e.g., pools) of streams in the Midwestern USA. Stream segments (n = 36), from four clusters of different soil and runoff conditions, were identified that had the highest percent of forest (n = 12), pasture (n = 12), and urban land use (n = 12) within each cluster. Channel units within each stream were delineated and independently sampled once using multiple gears in summer 2006. Data were analyzed using a generalized linear mixed model procedure with a binomial distribution and odds ratio statistics. Land use and channel unit were strong predictors of age-0, age-1, and age->1 Smallmouth Bass presence. Each age-class was more likely to be present in streams within watersheds dominated by forest land use than in those with pasture or urban land uses. The interaction between land use and channel unit was not significant in any of the models, indicating channel unit use by Smallmouth Bass did not depend on watershed land use. Each of the three age-classes was more likely to use pools than other channel units. However, streams with high densities of Smallmouth Bass age >1 had lower proportions of pools suggesting a variety of channel units is important even though habitat needs exist at the channel-unit scale. Management may benefit from future research addressing the significance of channel-unit quality as a possible mechanism for how land use impacts Smallmouth Bass populations. Further, management efforts aimed at improving stream habitat would likely be more beneficial if focused at the stream segment or landscape scale, where a variety of quality habitats might be supported.

Stream microbial diversity responds to environmental changes: Review and synthesis of existing research

Directory of Open Access Journals (Sweden)

Lydia eZeglin

2015-05-01

Full Text Available The importance of microbial activity to ecosystem function in aquatic ecosystems is well established, but microbial diversity has been less frequently addressed. This review and synthesis of the hundreds of published studies on stream microbial diversity shows that factors known to drive ecosystem processes, such as nutrient availability, hydrology, metal contamination, contrasting land-use and temperature, also cause heterogeneity in bacterial diversity. Temporal heterogeneity in stream bacterial diversity was frequently observed, reflecting the dynamic nature of both stream ecosystems and microbial community composition. However, within-stream spatial differences in stream bacterial diversity were more commonly observed, driven specifically by different organic matter compartments. Bacterial phyla showed similar patterns in relative abundance with regard to compartment type across different streams. For example, surface water contained the highest relative abundance of Actinobacteria, while epilithon contained the highest relative abundance of Cyanobacteria and Bacteroidetes. This suggests that contrasting physical and/or nutritional habitats characterized by different stream organic matter compartment types may select for certain bacterial lineages. When comparing the prevalence of physicochemical effects on stream bacterial diversity, effects of changing metal concentrations were most, while effects of differences in nutrient concentrations were least frequently observed. This may indicate that although changing nutrient concentrations do tend to affect microbial diversity, other environmental factors are more likely to alter stream microbial diversity and function. The common observation of connections between ecosystem process drivers and microbial diversity suggests that microbial taxonomic turnover could mediate ecosystem-scale responses to changing environmental conditions, including both microbial habitat distribution and

A multi-scaled approach to evaluating the fish assemblage structure within southern Appalachian streams USA.

Science.gov (United States)

Kirsch, Joseph; Peterson, James T.

2014-01-01

There is considerable uncertainty about the relative roles of stream habitat and landscape characteristics in structuring stream-fish assemblages. We evaluated the relative importance of environmental characteristics on fish occupancy at the local and landscape scales within the upper Little Tennessee River basin of Georgia and North Carolina. Fishes were sampled using a quadrat sample design at 525 channel units within 48 study reaches during two consecutive years. We evaluated species–habitat relationships (local and landscape factors) by developing hierarchical, multispecies occupancy models. Modeling results suggested that fish occupancy within the Little Tennessee River basin was primarily influenced by stream topology and topography, urban land coverage, and channel unit types. Landscape scale factors (e.g., urban land coverage and elevation) largely controlled the fish assemblage structure at a stream-reach level, and local-scale factors (i.e., channel unit types) influenced fish distribution within stream reaches. Our study demonstrates the utility of a multi-scaled approach and the need to account for hierarchy and the interscale interactions of factors influencing assemblage structure prior to monitoring fish assemblages, developing biological management plans, or allocating management resources throughout a stream system.

Modeling intrinsic potential for beaver (Castor canadensis) habitat to inform restoration and climate change adaptation

Science.gov (United States)

Dittbrenner, Benjamin J.; Pollack, Michael M.; Schilling, Jason W.; Olden, Julian D.; Lawler, Joshua J.; Torgersen, Christian E.

2018-01-01

Through their dam-building activities and subsequent water storage, beaver have the potential to restore riparian ecosystems and offset some of the predicted effects of climate change by modulating streamflow. Thus, it is not surprising that reintroducing beaver to watersheds from which they have been extirpated is an often-used restoration and climate-adaptation strategy. Identifying sites for reintroduction, however, requires detailed information about habitat factors—information that is not often available at broad spatial scales. Here we explore the potential for beaver relocation throughout the Snohomish River Basin in Washington, USA with a model that identifies some of the basic building blocks of beaver habitat suitability and does so by relying solely on remotely sensed data. More specifically, we developed a generalized intrinsic potential model that draws on remotely sensed measures of stream gradient, stream width, and valley width to identify where beaver could become established if suitable vegetation were to be present. Thus, the model serves as a preliminary screening tool that can be applied over relatively large extents. We applied the model to 5,019 stream km and assessed the ability of the model to correctly predict beaver habitat by surveying for beavers in 352 stream reaches. To further assess the potential for relocation, we assessed land ownership, use, and land cover in the landscape surrounding stream reaches with varying levels of intrinsic potential. Model results showed that 33% of streams had moderate or high intrinsic potential for beaver habitat. We found that no site that was classified as having low intrinsic potential had any sign of beavers and that beaver were absent from nearly three quarters of potentially suitable sites, indicating that there are factors preventing the local population from occupying these areas. Of the riparian areas around streams with high intrinsic potential for beaver, 38% are on public lands and 17

Modeling intrinsic potential for beaver (Castor canadensis) habitat to inform restoration and climate change adaptation.

Science.gov (United States)

Dittbrenner, Benjamin J; Pollock, Michael M; Schilling, Jason W; Olden, Julian D; Lawler, Joshua J; Torgersen, Christian E

2018-01-01

Through their dam-building activities and subsequent water storage, beaver have the potential to restore riparian ecosystems and offset some of the predicted effects of climate change by modulating streamflow. Thus, it is not surprising that reintroducing beaver to watersheds from which they have been extirpated is an often-used restoration and climate-adaptation strategy. Identifying sites for reintroduction, however, requires detailed information about habitat factors-information that is not often available at broad spatial scales. Here we explore the potential for beaver relocation throughout the Snohomish River Basin in Washington, USA with a model that identifies some of the basic building blocks of beaver habitat suitability and does so by relying solely on remotely sensed data. More specifically, we developed a generalized intrinsic potential model that draws on remotely sensed measures of stream gradient, stream width, and valley width to identify where beaver could become established if suitable vegetation were to be present. Thus, the model serves as a preliminary screening tool that can be applied over relatively large extents. We applied the model to 5,019 stream km and assessed the ability of the model to correctly predict beaver habitat by surveying for beavers in 352 stream reaches. To further assess the potential for relocation, we assessed land ownership, use, and land cover in the landscape surrounding stream reaches with varying levels of intrinsic potential. Model results showed that 33% of streams had moderate or high intrinsic potential for beaver habitat. We found that no site that was classified as having low intrinsic potential had any sign of beavers and that beaver were absent from nearly three quarters of potentially suitable sites, indicating that there are factors preventing the local population from occupying these areas. Of the riparian areas around streams with high intrinsic potential for beaver, 38% are on public lands and 17% are

Duck Valley Habitat Enhancement and Protection, 2000 Annual Report.

Energy Technology Data Exchange (ETDEWEB)

Dodson, Guy; Pero, Vincent (Shoshone-Paiute Nation, Duck Valley Indian Reservation, Owyhee, NV)

2000-01-01

The Duck Valley Indian Reservations' Habitat Enhancement project is an ongoing project designed to enhance and protect the critical riparian areas, natural springs, and native fish spawning areas on the Reservation. The project was begun in 1997 with the hiring of a fisheries biologist and the creation of a new department for the Tribes. The project's goals are to protect and enhance the springs, Owyhee River, its tributaries, and to develop a database that can be used by other fisheries professionals which includes information on water quality and fish composition, health, abundance, and genetic makeup. One habitat portion of the project is a focus on protection the numerous springs that provide clean, cool water to the Owyhee River. This will be accomplished through enclosure fences of the spring heads and water troughs to provide clean cool drinking water for wildlife and livestock. Another habitat portion of the project involves protecting headwater areas of streams with native fish populations. This is accomplished through enclosure fencing and riparian plantings on any eroded or degraded banks in the enclosure area. Finally, we monitor and evaluate the areas protected and enhanced. This is accomplished through biological sampling for temperature, Oxygen, sedimentation, and measurements of water depth, bank height and undercut, and width of stream. With the habitat and biological indices we will be able to evaluate how well protective measures are doing, and where to focus future efforts.

Ragweed (Ambrosia) pollen source inventory for Austria.

Science.gov (United States)

Karrer, G; Skjøth, C A; Šikoparija, B; Smith, M; Berger, U; Essl, F

2015-08-01

This study improves the spatial coverage of top-down Ambrosia pollen source inventories for Europe by expanding the methodology to Austria, a country that is challenging in terms of topography and the distribution of ragweed plants. The inventory combines annual ragweed pollen counts from 19 pollen-monitoring stations in Austria (2004-2013), 657 geographical observations of Ambrosia plants, a Digital Elevation Model (DEM), local knowledge of ragweed ecology and CORINE land cover information from the source area. The highest mean annual ragweed pollen concentrations were generally recorded in the East of Austria where the highest densities of possible growth habitats for Ambrosia were situated. Approximately 99% of all observations of Ambrosia populations were below 745m. The European infection level varies from 0.1% at Freistadt in Northern Austria to 12.8% at Rosalia in Eastern Austria. More top-down Ambrosia pollen source inventories are required for other parts of Europe. A method for constructing top-down pollen source inventories for invasive ragweed plants in Austria, a country that is challenging in terms of topography and ragweed distribution. Crown Copyright © 2015. Published by Elsevier B.V. All rights reserved.

Substrate homogenization affects survival and fitness in the lowland stream caddisflies Micropterna sequax and Potamophylax rotundipennis

NARCIS (Netherlands)

Westveer, Judith J.; Verdonschot, Piet F.M.; Verdonschot, Ralf C.M.

2017-01-01

Loss of substrate heterogeneity or patchiness is common in lowland streams with disturbed hydrological regimes. At the reach scale, peak discharges tend to homogenize the stream bed and decrease the availability of specific microhabitat types. This spatial shift in habitats toward a more

Macroinvertebrates associated with bryophyta in a first-order Atlantic Forest stream

Directory of Open Access Journals (Sweden)

Beatriz F. J. V. Rosa

2011-06-01

Full Text Available This study describes the composition and structure of the benthic community associated with bryophytes in a first-order stream, located in a biological reserve of the Atlantic Forest, during two seasons. During three months of the dry season of 2007 and three months of the rainy season of 2008, samples of bryophytes attached to stones were collected randomly, along a 100 m stream reach. The structure of the community was analyzed through the mean density of individuals, Shannon's diversity index, Pielou's evenness, family richness, dominance index, and the percentage of Ephemeroptera, Plecoptera and Trichoptera (% EPT. Chironomidae larvae were dominant in the two periods of study, followed by Ceratopogonidae in the rainy season, and Naididae in the dry season. The orders EPT contributed 14 families. The results showed that bryophytes constitute suitable habitat which is able to shelter an abundant and diversified benthic fauna in a small extension of the stream. This habitat provides refuge during spates, and thus minimizes downstream transport of the macroinvertebrate fauna.

Macrophyte presence is an indicator of enhanced denitrification and nitrification in sediments of a temperate restored agricultural stream

Science.gov (United States)

Stream macrophytes are often removed with their sediments to deepen stream channels, stabilize channel banks, or provide habitat for target species. These sediments may support enhanced nitrogen processing. To evaluate sediment nitrogen processing, identify seasonal patterns, and...

Parallel habitat acclimatization is realized by the expression of different genes in two closely related salamander species (genus Salamandra).

Science.gov (United States)

Goedbloed, D J; Czypionka, T; Altmüller, J; Rodriguez, A; Küpfer, E; Segev, O; Blaustein, L; Templeton, A R; Nolte, A W; Steinfartz, S

2017-12-01

The utilization of similar habitats by different species provides an ideal opportunity to identify genes underlying adaptation and acclimatization. Here, we analysed the gene expression of two closely related salamander species: Salamandra salamandra in Central Europe and Salamandra infraimmaculata in the Near East. These species inhabit similar habitat types: 'temporary ponds' and 'permanent streams' during larval development. We developed two species-specific gene expression microarrays, each targeting over 12 000 transcripts, including an overlapping subset of 8331 orthologues. Gene expression was examined for systematic differences between temporary ponds and permanent streams in larvae from both salamander species to establish gene sets and functions associated with these two habitat types. Only 20 orthologues were associated with a habitat in both species, but these orthologues did not show parallel expression patterns across species more than expected by chance. Functional annotation of a set of 106 genes with the highest effect size for a habitat suggested four putative gene function categories associated with a habitat in both species: cell proliferation, neural development, oxygen responses and muscle capacity. Among these high effect size genes was a single orthologue (14-3-3 protein zeta/YWHAZ) that was downregulated in temporary ponds in both species. The emergence of four gene function categories combined with a lack of parallel expression of orthologues (except 14-3-3 protein zeta) suggests that parallel habitat adaptation or acclimatization by larvae from S. salamandra and S. infraimmaculata to temporary ponds and permanent streams is mainly realized by different genes with a converging functionality.

Pilot Inventory of mammals, reptiles, and amphibians, Golden Gate National Recreation Area, California, 1990-1997

Science.gov (United States)

Semenoff-Irving, M.; Howell, J.A.

2005-01-01

The United States Geological Survey Golden Gate Field Station conducted a baseline inventory of terrestrial vertebrates within the Golden Gate National Recreation Area (GGNRA), Marin, San Francisco, and San Mateo Counties, California between 1990 and 1997. We established 456 permanent study plots in 6 major park habitats, including grassland, coastal scrub, riparian woodland, coastal wetland, broad-leaved evergreen forest, and needle-leaved evergreen forest. We tested multiple inventory methods, including live traps, track plate stations, and artificial cover boards, across all years and habitats. In most years, sampling occurred in 3?4 primary sampling sessions between July and September. In 1994, additional sampling occurred in February and May in conjunction with an assessment of Hantavirus exposure in deer mice (Peromyscus maniculatus). Overall, we detected 32 mammal, 14 reptile, and 6 amphibian species during 25,222 trap-nights of effort. The deer mouse?the most abundant species detected--accounted for 67% of total captures. We detected the Federal Endangered salt marsh harvest mouse (Reithrodontomys raviventris) at one coastal wetland plot in 1992. This project represents the first phase in the development of a comprehensive terrestrial vertebrate inventory and monitoring program for GGNRA. This report summarizes data on relative abundance, frequency of occurrence, distribution across habitat types, and trap success for terrestrial vertebrates detected during this 7-year effort. It includes comprehensive descriptions of the inventory methods and sampling strategies employed during this survey and is intended to help guide the park in the implementation of future longterm ecological monitoring programs.

Radioactive contamination of fishes in lake and streams impacted by the Fukushima nuclear power plant accident

Energy Technology Data Exchange (ETDEWEB)

Yoshimura, Mayumi, E-mail: yoshi887@ffpri.affrc.go.jp [Kansai Research Center, Forestry and Forest Products Research Institute, Nagaikyuutaro 68, Momoyama, Fushimi, Kyoto 612-0855 (Japan); Yokoduka, Tetsuya [Tochigi Prefectural Fisheries Experimental Station, Sarado 2599, Ohtawara, Tochigi 324-0404 (Japan)

2014-06-01

The Fukushima Daiichi Nuclear Power Plant (FDNPP) accident in March 2011 emitted radioactive substances into the environment, contaminating a wide array of organisms including fishes. We found higher concentrations of radioactive cesium ({sup 137}Cs) in brown trout (Salmo trutta) than in rainbow trout (Oncorhynchus nerka), and {sup 137}Cs concentrations in brown trout were higher in a lake than in a stream. Our analyses indicated that these differences were primarily due to differences in diet, but that habitat also had an effect. Radiocesium concentrations ({sup 137}Cs) in stream charr (Salvelinus leucomaenis) were higher in regions with more concentrated aerial activity and in older fish. These results were also attributed to dietary and habitat differences. Preserving uncontaminated areas by remediating soils and releasing uncontaminated fish would help restore this popular fishing area but would require a significant effort, followed by a waiting period to allow activity concentrations to fall below the threshold limits for consumption. - Highlight: • Concentration of {sup 137}Cs in brown trout was higher than in rainbow trout. • {sup 137}Cs concentration of brown trout in a lake was higher than in a stream. • {sup 137}Cs concentration of stream charr was higher in region with higher aerial activity. • Concentration of {sup 137}Cs in stream charr was higher in older fish. • Difference of contamination among fishes was due to difference in diet and habitat.

Quality of Streams in Johnson County, Kansas, and Relations to Environmental Variables, 2003-07

Science.gov (United States)

Rasmussen, Teresa J.; Poulton, Barry C.; Graham, Jennifer L.

2009-01-01

The quality of streams and relations to environmental variables in Johnson County, northeastern Kansas, were evaluated using water, streambed sediment, land use, streamflow, habitat, algal periphyton (benthic algae), and benthic macroinvertebrate data. Water, streambed sediment, and macroinvertebrate samples were collected in March 2007 during base flow at 20 stream sites that represent 11 different watersheds in the county. In addition, algal periphyton samples were collected twice (spring and summer 2007) at one-half of the sites. Environmental data including water and streambed-sediment chemistry data (primarily nutrients, fecal-indicator bacteria, and organic wastewater compounds), land use, streamflow, and habitat data were used in statistical analyses to evaluate relations between biological conditions and variables that may affect them. This report includes an evaluation of water and streambed-sediment chemistry, assessment of habitat conditions, comparison of biological community attributes (such as composition, diversity, and abundance) among sampling sites, placement of sampling sites into impairment categories, evaluation of biological data relative to environmental variables, and evaluation of changes in biological communities and effects of urbanization. This evaluation is useful for understanding factors that affect stream quality, for improving water-quality management programs, and for documenting changing conditions over time. The information will become increasingly important for protecting streams in the future as urbanization continues. Results of this study indicate that the biological quality at nearly all biological sampling sites in Johnson County has some level of impairment. Periphyton taxa generally were indicative of somewhat degraded conditions with small to moderate amounts of organic enrichment. Camp Branch in the Blue River watershed was the only site that met State criteria for full support of aquatic life in 2007. Since 2003

Instream flow characterization of upper Salmon River basin streams, central Idaho, 2004

Science.gov (United States)

Maret, Terry R.; Hortness, Jon E.; Ott, Douglas S.

2005-01-01

Anadromous fish populations in the Columbia River Basin have plummeted in the last 100 years. This severe decline led to Federal listing of Chinook salmon (Oncorhynchus tshawytscha) and steelhead trout (Oncorhynchus mykiss) stocks as endangered or threatened under the Endangered Species Act (ESA) in the 1990s. Historically, the upper Salmon River Basin (upstream of the confluence with the Pahsimeroi River) in Idaho provided migration corridors and significant habitat for these ESA-listed species, in addition to the ESA-listed bull trout (Salvelinus confluentus). Human development has modified the original streamflow conditions in many streams in the upper Salmon River Basin. Summer streamflow modifications resulting from irrigation practices, have directly affected quantity and quality of fish habitat and also have affected migration and (or) access to suitable spawning and rearing habitat for these fish. As a result of these ESA listings and Action 149 of the Federal Columbia River Power System Biological Opinion of 2000, the Bureau of Reclamation was tasked to conduct streamflow characterization studies in the upper Salmon River Basin to clearly define habitat requirements for effective species management and habitat restoration. These studies include collection of habitat and streamflow information for the Physical Habitat Simulation System model, a widely applied method to determine relations between habitat and discharge requirements for various fish species and life stages. Model results can be used by resource managers to guide habitat restoration efforts by evaluating potential fish habitat and passage improvements by increasing streamflow. In 2004, instream flow characterization studies were completed on Salmon River and Beaver, Pole, Champion, Iron, Thompson, and Squaw Creeks. Continuous streamflow data were recorded upstream of all diversions on Salmon River and Pole, Iron, Thompson, and Squaw Creeks. In addition, natural summer streamflows were

Lantana camara L. (Verbenaceae) invasion along streams in a ...

Indian Academy of Sciences (India)

Streams are periodically disturbed due to flooding, act as edges between habitats and also facilitate the dispersal of propagules, thus being potentially more vulnerable to invasions than adjoining regions. We used a landscape-wide transect-based sampling strategy and a mixed effects modelling approach to understand ...

US Department of Energy interim mixed waste inventory report: Waste streams, treatment capacities and technologies: Volume 2, Site specific---California through Idaho

International Nuclear Information System (INIS)

1993-04-01

The Department of Energy (DOE) has prepared this report to provide an inventory of its mixed wastes and treatment capacities and technologies in response to Section 105(a) of the Federal Facility Compliance act (FFCAct) of 1992 (Pub. L. No. 102-386). As required by the FFCAct-1992, this report provide site-specific information on DOE's mixed waste streams and a general review of available and planned treatment facilities for mixed wastes for the following sites: eight California facilities which are Energy Technology engineering Center, General Atomics, General Electric Vallecitos Nuclear Center, Lawrence Berkeley Laboratory, Lawrence Livermore National Laboratory, Laboratory for Energy-Related Health Research, Mare Island Naval Shipyard, and Sandia national Laboratories; Grand Junction Project Office; Rocky Flats Plant; Knolls Atomic Power Laboratory-Windsor Site; Pinellas Plant; Pearl Harbor Naval Shipyard; Argonne National Laboratory-West; and Idaho National Engineering Laboratory

Ecoregion and land-use influence invertebrate and detritus transport from headwater streams

Science.gov (United States)

Binckley, Christopher A.; Wipfli, Mark S.; Medhurst, R. Bruce; Polivka, Karl; Hessburg, Paul F.; Salter, R. Brion; Kill, Joshua Y.

2010-01-01

Summary 1. Habitats are often connected by fluxes of energy and nutrients across their boundaries. For example, headwater streams are linked to surrounding riparian vegetation through invertebrate and leaf litter inputs, and there is evidence that consumers in downstream habitats are subsidised by resources flowing from headwater systems. However, the strength of these linkages and the manner in which potential headwater subsidies vary along climatic and disturbance gradients are unknown.

Activities and Ecological Role of Adult Aquatic Insects in the Riparian Zone of Streams

Science.gov (United States)

John K. Jackson; Vincent H. Resh

1989-01-01

Most adult aquatic insects that emerge from streams live briefly in the nearby riparian zone. Adult activities, such as mating, dispersal, and feeding, influence their distribution in the terrestrial habitat. A study at Big Sulphur Creek, California, has shown that both numbers and biomass of adult aquatic insects are greatest in the near-stream vegetation; however,...

California golden trout and climate change: Is their stream habitat vulnerable to climate warming?

Science.gov (United States)

Kathleen R. Matthews

2010-01-01

The California golden trout (CGT) Oncorhynchus mykiss aguabonita is one of the few native high-elevation fish in the Sierra Nevada. They are already in trouble because of exotic trout, genetic introgression, and degraded habitat, and now face further stress from climate warming. Their native habitat on the Kern Plateau meadows mostly in the Golden...

The world's richest tadpole communities show functional redundancy and low functional diversity: ecological data on Madagascar's stream-dwelling amphibian larvae

Directory of Open Access Journals (Sweden)

Randrianiaina Roger-Daniel

2010-05-01

Full Text Available Abstract Background Functional diversity illustrates the range of ecological functions in a community. It allows revealing the appearance of functional redundancy in communities and processes of community assembly. Functional redundancy illustrates the overlap in ecological functions of community members which may be an indicator of community resilience. We evaluated patterns of species richness, functional diversity and functional redundancy on tadpole communities in rainforest streams in Madagascar. This habitat harbours the world's most species-rich stream tadpole communities which are due to their occurrence in primary habitat of particular interest for functional diversity studies. Results Species richness of tadpole communities is largely determined by characteristics of the larval habitat (stream structure, not by adult habitat (forest structure. Species richness is positively correlated with a size-velocity gradient of the streams, i.e. communities follow a classical species-area relationship. While widely observed for other taxa, this is an unusual pattern for anuran larvae which usually is expected to be hump-shaped. Along the species richness gradient, we quantified functional diversity of all communities considering the similarity and dissimilarity of species in 18 traits related to habitat use and foraging. Especially species-rich communities were characterised by an overlap of species function, i.e. by functional redundancy. By comparing the functional diversity of the observed communities with functional diversity of random assemblages, we found no differences at low species richness level, whereas observed species-rich communities have lower functional diversity than respective random assemblages. Conclusions We found functional redundancy being a feature of communities also in primary habitat, what has not been shown before using such a continuous measure. The observed species richness dependent pattern of low functional

The significance of small streams

Science.gov (United States)

Wohl, Ellen

2017-09-01

Headwaters, defined here as first- and secondorder streams, make up 70%‒80% of the total channel length of river networks. These small streams exert a critical influence on downstream portions of the river network by: retaining or transmitting sediment and nutrients; providing habitat and refuge for diverse aquatic and riparian organisms; creating migration corridors; and governing connectivity at the watershed-scale. The upstream-most extent of the channel network and the longitudinal continuity and lateral extent of headwaters can be difficult to delineate, however, and people are less likely to recognize the importance of headwaters relative to other portions of a river network. Consequently, headwaters commonly lack the legal protections accorded to other portions of a river network and are more likely to be significantly altered or completely obliterated by land use.

Associations of stream geomorphic conditions and prevalence of alternative reproductive tactics among sockeye salmon populations

Science.gov (United States)

DeFilippo, L. B.; Schindler, D.E.; Carter, J.L.; Walsworth, Timothy E.; Cline, T. J.; Larson, Wesley; Buehrens, T.

2018-01-01

In many species, males may exhibit alternative life histories to circumvent the costs of intrasexual competition and female courtship. While the evolution and underlying genetic and physiological mechanisms behind alternative reproductive tactics are well studied, there has been less consideration of the ecological factors that regulate their prevalence. Here, we examine six decades of age composition records from thirty‐six populations of sockeye salmon (Oncorhynchus nerka) to quantify associations between spawning habitat characteristics and the prevalence of precocious sneakers known as ‘jacks’. Jack prevalence was independent of neutral genetic structure among stream populations, but varied among habitat types and as a function of continuous geomorphic characteristics. Jacks were more common in streams relative to beaches and rivers, and their prevalence was negatively associated with stream width, depth, elevation, slope and area, but positively related to bank cover. Behavioural observations showed that jacks made greater use of banks, wood and shallows than guard males, indicating that their reproductive success depends on the availability of such refuges. Our results emphasize the role of the physical habitat in shaping reproductive tactic frequencies among populations, likely through local adaptation in response to variable fitness expectations under different geomorphic conditions.

Development and Validation of Spatially Explicit Habitat Models for Cavity-nesting Birds in Fishlake National Forest, Utah

Science.gov (United States)

Randall A., Jr. Schultz; Thomas C., Jr. Edwards; Gretchen G. Moisen; Tracey S. Frescino

2005-01-01

The ability of USDA Forest Service Forest Inventory and Analysis (FIA) generated spatial products to increase the predictive accuracy of spatially explicit, macroscale habitat models was examined for nest-site selection by cavity-nesting birds in Fishlake National Forest, Utah. One FIA-derived variable (percent basal area of aspen trees) was significant in the habitat...

The Effect of Catchment Urbanization on Nutrient Uptake and Biofilm Enzyme Activity in Lake Superior (USA) Tributary Streams

Science.gov (United States)

We used landscape, habitat, and chemistry variables, along with nutrient spiraling metrics and biofilm extracellular enzyme activity (EEA), to assess the response of streams to the level of urbanization within their catchments. For this study nine streams of similar catchment are...

New methods for modeling stream temperature using high resolution LiDAR, solar radiation analysis and flow accumulated values

Science.gov (United States)

In-stream temperature directly effects a variety of biotic organisms, communities and processes. Changes in stream temperature can render formally suitable habitat unsuitable for aquatic organisms, particularly native cold water species that are not able to adjust. In order to an...

Biotic Responses of Headwater Streams to Geophysical Alteration and Disturbance Related to Climate Change

Science.gov (United States)

Gresswell, R. E.; Sedell, E. R.; Cannon, S.; Hostetler, S. W.; Williams, J. E.; Haak, A. L.; Kershner, J. L.

2009-12-01

Climate change will potentially alter physical habitat availability for trout species (both native and nonnative) in the western USA, and ultimately affect population distribution and abundance in watersheds across the region. To understand the biological consequences of habitat alteration associated with climate change, we have developed models linking contemporary patterns of occurrence and abundance to geomorphic variables (e.g., aspect, elevation, and slope) and stream conditions derived from the habitat (e.g., temperature, discharge, and flood regimes). Because headwater streams may be especially susceptible to catastrophic disturbances in the form of debris flow torrents that have the potential to radically alter the physical structure of channels and sometimes extirpate local fish populations, we are focusing fine-scale spatial analyses in the high elevation systems. Risks of such disturbances increase exponentially in landscapes that have experienced recent wildfires when high-intensity precipitation or runoff events occur. Although predicting the timing, extent, and severity of future wildfires or subsequent precipitation and runoff events is difficult, it is possible to identify channels within stream networks that may be prone to debris flows. These channels can be identified using models based on characteristic storm and burn scenarios and geographic information describing topographic, soil, and vegetation characteristics. At-risk channels are being mapped throughout the stream networks within the study areas in the headwaters of the Colorado River to provide information about the potential for catastrophic population disturbance in response to variety of wildfire and post-wildfire storm scenarios.

Habitat use of the Louisiana Waterthrush during the non-breeding season in Puerto Rico

Science.gov (United States)

M.T. Hallworth; L.R. Reitsma; K. Parent

2011-01-01

We used radiotelemetry to quantify habitat and spatial use patterns of neighboring Louisiana Waterthrush (Parkesia motacilla) along two streams in the Caribbean National Forest in Puerto Rico during 2005–2007. Home range sizes varied with younger birds having larger home ranges and core areas than older birds. All birds occupied some length of stream but a wide range...

John Day River Subbasin Fish Habitat Enhancement Project, 2002-2003 Annual Report.

Energy Technology Data Exchange (ETDEWEB)

Powell, Russ M.; Delano, Kenneth H.

2004-04-01

Work undertaken in 2003 included: (1) Seven new fence projects were completed thereby protecting 7.6 miles of stream (2) Completion of 0.7 miles of dredge tail leveling on Granite Creek. (3) Maintenance of all active project fences (66.14 miles), watergaps (66), spring developments (33) and plantings were checked and repairs performed. (4) Since the initiation of the Fish Habitat Project in 1984 we have 72.94 miles of stream protected using 131.1 miles of fence. With the addition of the Restoration and Enhancement Projects we have 205.96 miles of fence protecting 130.3 miles of stream.

Relative performance of three stream bed stability indices as indicators of stream health.

Science.gov (United States)

Kusnierz, Paul C; Holbrook, Christopher M

2017-10-16

Bed stability is an important stream habitat attribute because it affects geomorphology and biotic communities. Natural resource managers desire indices of bed stability that can be used under a wide range of geomorphic conditions, are biologically meaningful, and are easily incorporated into sampling protocols. To eliminate potential bias due to presence of instream wood and increase precision of stability values, we modified a stream bed instability index (ISI) to include measurements of bankfull depth (d bf ) and median particle diameter (D 50 ) only in riffles and increased the pebble count to decrease variability (i.e., increase precision) in D 50 . The new riffle-based instability index (RISI) was compared to two established indices: ISI and the riffle stability index (RSI). RISI and ISI were strongly associated with each other but neither was closely associated with RSI. RISI and ISI were closely associated with both a diatom- and two macrovertebrate-based stream health indices, but RSI was only weakly associated with the macroinvertebrate indices. Unexpectedly, precision of D 50 did not differ between RISI and ISI. Results suggest that RISI is a viable alternative to both ISI and RSI for evaluating bed stability in multiple stream types. With few data requirements and a simple protocol, RISI may also better conform to riffle-based sampling methods used by some water quality practitioners.

Coho Salmon Habitat in a Changing Environment-Green Valley Creek, Graton, California

Science.gov (United States)

O'Connor, M. D.; Kobor, J. S.; Sherwood, M. N.

2013-12-01

Green Valley Creek (GVC) is a small (101 sq km) aquatic habitat refugium in the Russian River watershed (3,840 sq km) in coastal northern California. Coho salmon (Onchorhynchus kisutch) is endangered per the Federal Endangered Species Act, and GVC is one stream where coho have persisted. Fish surveys in GVC have found high species diversity, growth rates, and over-summer survival. The upper portion of GVC comprises a principal tributary (20 sq km) that provides spawning and rearing habitat for coho. The second principal tributary, Atascadero Creek, is comparable in size, but has few fish. Atascadero Creek and lower GVC have broad, densely vegetated floodplains. A Recovery Plan for the Central Coastal California coho Evolutionarily Significant Unit has been developed by the National Marine Fisheries Service (NMFS), which applies to the Russian River and its tributaries. Cooperative research regarding fish populations and habitat, a captive breeding and release program for native coho salmon, and efforts to plan for and restore habitat are ongoing. These regional efforts are particularly active in GVC, and participants include NMFS, the California Department of Fish and Wildlife, the Gold Ridge Resource Conservation District, the California Coastal Conservancy, the University of California Cooperative Extension, and the National Fish and Wildlife Foundation, among others. Our research focuses on hydrologic, geomorphic and hydrogeologic characteristics of the watershed in relation to aquatic habitat. Natural watershed factors contributing to habitat for coho include proximity to the coastal summer fog belt with cool temperatures, the Wilson Grove Formation aquifer that maintains dry season stream flow, and structural geology favorable for active floodplain morphology. Human impacts include water use and agriculture and rural residential development. Historic human impacts include stream clearing and draining of wetlands and floodplain for agriculture, which likely

Flume experiments on scour downstream of wood stream restoration structures

Science.gov (United States)

Pagliara, Stefano; Kurdistani, Sahameddin Mahmoudi

2017-02-01

River restoration aims to improve physical natural form and processes of a river. Techniques to control the riverbed, stabilize channel alignment, protect stream banks, and rebuild the natural habitat are an important part of river restoration projects. Rivers can be stabilized and habitat restored through techniques such as rebuilding meanders and pool-riffle sequences and managing large wood. Structures that limit channel width to accelerate the normal flows through the constricted section are referred to as stream deflectors. Single-wing, double-wing and triangular deflectors are the most commonly used types of this measure. Log-frame deflectors consist of a triangular log frame filled with rock. Deflector constructions singly or in series in low gradient meandering streams, divert base flows toward the center of the channel and, under certain conditions, increase the depth and velocity of flow thereby creating scour pools and enhancing fish habitat. Scour characteristics and morphologies downstream of log-frame deflectors have been analyzed at the hydraulic laboratory of the University of Pisa. All experiments have been carried out in clear water conditions. The results showed that the tailwater depth plays an important role on scour characteristics. In addition, it was experimentally proven that using log-frame deflectors instead of log-deflectors result in a better river bank protection. In this case, for all the tested hydraulic conditions, the scour hole never occurred close to the channel bank. Useful empirical relationships have been proposed in order to evaluate the main features of the scour geometry.

Watershed Evaluation and Habitat Response to Recent Storms : Annual Report for 1999.

Energy Technology Data Exchange (ETDEWEB)

Rhodes, Jonathan J.; Huntington, Charles W.

2000-02-01

Large and powerful storm systems moved through the Pacific Northwest during the wet season of 1995--96, triggering flooding, mass erosion, and, alteration of salmon habitats in affected watersheds. This project study was initiated to assess whether watershed conditions are causing damage, triggered by storm events, to salmon habitat on public lands in the Snake River basin. The storms and flooding in 1995--96 provide a prime opportunity to examine whether habitat conditions are improving, because the effects of land management activities on streams and salmon habitat are often not fully expressed until triggered by storms and floods. To address these issues, they are studying the recent storm responses of watersheds and salmon habitat in systematically selected subbasins and watersheds within the Snake River system. The study watersheds include several in the Wenaha and Tucannon subbasins in Washington and Oregon, and the watersheds of Squaw Creek (roaded) and Weir Creek (unroaded) in the Lochsa River subbasin, Idaho. The study was designed to examine possible differences in the effects of the storms in broadly comparable watersheds with differing magnitudes or types of disturbance. Watershed response is examined by comparing storm response mechanisms, such as rates of mass failure, among watersheds with similar attributes, but different levels of land management. The response of salmon habitat conditions is being examined by comparing habitat conditions before and after the storms in a stream and among streams in watersheds with similar attributes but different levels of land management. If appropriate to the results, the study will identify priority measures for reducing the severity of storm responses in watersheds within the Snake River Basin with habitat for at-risk salmon. This annual report describes the attributes of the study watersheds and the criteria and methods used to select them. The report also describes the watershed and fish habitat attributes

Watershed evaluation and habitat response to recent storms; annual report for 1999

International Nuclear Information System (INIS)

Rhodes, Jonathan J.; Huntington, Charles W.

2000-01-01

Large and powerful storm systems moved through the Pacific Northwest during the wet season of 1995--96, triggering flooding, mass erosion, and, alteration of salmon habitats in affected watersheds. This project study was initiated to assess whether watershed conditions are causing damage, triggered by storm events, to salmon habitat on public lands in the Snake River basin. The storms and flooding in 1995--96 provide a prime opportunity to examine whether habitat conditions are improving, because the effects of land management activities on streams and salmon habitat are often not fully expressed until triggered by storms and floods. To address these issues, they are studying the recent storm responses of watersheds and salmon habitat in systematically selected subbasins and watersheds within the Snake River system. The study watersheds include several in the Wenaha and Tucannon subbasins in Washington and Oregon, and the watersheds of Squaw Creek (roaded) and Weir Creek (unroaded) in the Lochsa River subbasin, Idaho. The study was designed to examine possible differences in the effects of the storms in broadly comparable watersheds with differing magnitudes or types of disturbance. Watershed response is examined by comparing storm response mechanisms, such as rates of mass failure, among watersheds with similar attributes, but different levels of land management. The response of salmon habitat conditions is being examined by comparing habitat conditions before and after the storms in a stream and among streams in watersheds with similar attributes but different levels of land management. If appropriate to the results, the study will identify priority measures for reducing the severity of storm responses in watersheds within the Snake River Basin with habitat for at-risk salmon. This annual report describes the attributes of the study watersheds and the criteria and methods used to select them. The report also describes the watershed and fish habitat attributes

Do Riparian Buffers Protect Stream Invertebrate Communities in South American Atlantic Forest Agricultural Areas?

Science.gov (United States)

Hunt, L.; Marrochi, N.; Bonetto, C.; Liess, M.; Buss, D. F.; Vieira da Silva, C.; Chiu, M.-C.; Resh, V. H.

2017-12-01

We investigated the influence and relative importance of insecticides and other agricultural stressors in determining variability in invertebrate communities in small streams in intensive soy-production regions of Brazil and Paraguay. In Paraguay we sampled 17 sites on tributaries of the Pirapó River in the state of Itapúa and in Brazil we sampled 18 sites on tributaries of the San Francisco River in the state of Paraná. The riparian buffer zones generally contained native Atlantic forest remnants and/or introduced tree species at various stages of growth. In Brazil the stream buffer width was negatively correlated with sediment insecticide concentrations and buffer width was found to have moderate importance in mitigating effects on some sensitive taxa such as mayflies. However, in both regions insecticides had low relative importance in explaining variability in invertebrate communities, while various habitat parameters were more important. In Brazil, the percent coverage of soft depositional sediment in streams was the most important agriculture-related explanatory variable, and the overall stream-habitat score was the most important variable in Paraguay streams. Paraguay and Brazil both have laws requiring forested riparian buffers. The ample forested riparian buffer zones typical of streams in these regions are likely to have mitigated the effects of pesticides on stream invertebrate communities. This study provides evidence that riparian buffer regulations in the Atlantic Forest region are protecting stream ecosystems from pesticides and other agricultural stressors. Further studies are needed to determine the minimum buffer widths necessary to achieve optimal protection.

The idiosyncrasies of streams: local variability mitigates vulnerability of trout to changing conditions

Science.gov (United States)

Andrea Watts; Brooke Penaluna; Jason Dunham

2016-01-01

Land use and climate change are two key factors with the potential to affect stream conditions and fish habitat. Since the 1950s, Washington and Oregon have required forest practices designed to mitigate the effects of timber harvest on streams and fish. Yet questions remain about the extent to which these practices are effective. Add in the effects of climate change—...

Blanding’s Turtle (Emydoidea blandingii Potential Habitat Mapping Using Aerial Orthophotographic Imagery and Object Based Classification

Directory of Open Access Journals (Sweden)

Douglas J. King

2012-01-01

Full Text Available Blanding’s turtle (Emydoidea blandingii is a threatened species under Canada’s Species at Risk Act. In southern Québec, field based inventories are ongoing to determine its abundance and potential habitat. The goal of this research was to develop means for mapping of potential habitat based on primary habitat attributes that can be detected with high-resolution remotely sensed imagery. Using existing spring leaf-off 20 cm resolution aerial orthophotos of a portion of Gatineau Park where some Blanding’s turtle observations had been made, habitat attributes were mapped at two scales: (1 whole wetlands; (2 within wetland habitat features of open water, vegetation (used for camouflage and thermoregulation, and logs (used for spring sun-basking. The processing steps involved initial pixel-based classification to eliminate most areas of non-wetland, followed by object-based segmentations and classifications using a customized rule sequence to refine the wetland map and to map the within wetland habitat features. Variables used as inputs to the classifications were derived from the orthophotos and included image brightness, texture, and segmented object shape and area. Independent validation using field data and visual interpretation showed classification accuracy for all habitat attributes to be generally over 90% with a minimum of 81.5% for the producer’s accuracy of logs. The maps for each attribute were combined to produce a habitat suitability map for Blanding’s turtle. Of the 115 existing turtle observations, 92.3% were closest to a wetland of the two highest suitability classes. High-resolution imagery combined with object-based classification and habitat suitability mapping methods such as those presented provide a much more spatially explicit representation of detailed habitat attributes than can be obtained through field work alone. They can complement field efforts to document and track turtle activities and can contribute to

Coexistence of two freshwater turtle species along a Mediterranean stream: The role of spatial and temporal heterogeneity

Science.gov (United States)

Segurado, Pedro; Figueiredo, Diogo

2007-09-01

In the Iberian Peninsula the European pond turtle ( Emys orbicularis) and the Mediterranean pond turtle ( Mauremys leprosa) share many freshwater habitats, in particular Mediterranean streams. Whether and how these two species divide space within those habitats is poorly known in part due to the very low abundance of E. orbicularis at most syntopic sites. The spatial coexistence of these two species was studied along a 1.3 km reach of a typical Mediterranean stream based on data from trapping sessions and basking counts. The effect of the hydrological regime on differences in space use between species was also assessed. Spatial associations between species and between each species and microhabitat descriptors were estimated using a permutation procedure to account for spatial autocorrelation. Differences in the use of space were also estimated using a resample technique to account for the small sample sizes of E. orbicularis. Results indicate that E. orbicularis shows a preference for temporary, shallow, well vegetated and sandy reaches, while M. leprosa is less selective regarding microhabitat. Differences between E. orbicularis and juveniles of M. leprosa were less obvious. The high spatial heterogeneity of Mediterranean streams may be responsible for the persistence of viable populations of E. orbicularis as well as favouring the coexistence of the two turtle species. Therefore, stream habitat management and conservation plans for E. orbicularis should give priority to the maintenance of high levels of heterogeneity along Mediterranean streams.

Wigwam River juvenile bull trout and fish habitat monitoring program : 2001 data report

International Nuclear Information System (INIS)

Cope, R.S.; Morris, K.J.; Bisset, J.E.

2002-01-01

The Wigwam River juvenile bull trout and fish habitat monitoring program is a co-operative initiative of the British Columbia Ministry of Water, Land, and Air Protection and Bonneville Power Administration. The Wigwam River has been characterized as the single most important bull trout spawning stream in the Kootenay Region. This report provides a summary of results obtained during the second year (2001) of the juvenile bull trout enumeration and fish habitat assessment program. This project was commissioned in planning for fish habitat protection and forest development within the upper Wigwam River valley. The broad intent is to develop a better understanding of juvenile bull trout and Westslope cutthroat trout recruitment and the ongoing hydrologic and morphologic processes in the upper Wigwam River, especially as they relate to spawning and rearing habitat quality. Five permanent sampling sites were established August 2000 in the Wigwam river drainage (one site on Bighorn Creek and four sites on the mainstem Wigwam River). At each site, juvenile (0(sup+), 1(sup+) and 2(sup+) age classes) fish densities and stream habitat conditions were measured over two stream meander wavelengths. Bull trout represented 95.1% of the catch and the mean density of juvenile bull trout was estimated to be 20.7 fish/100m(sup 2) (range 0.9 to 24.0 fish/100m(sup 2)). This compares to 17.2 fish/100m(sup 2) (+20%) for the previous year. Fry (0(sup+)) dominated the catch and this was a direct result of juvenile bull trout ecology and habitat partitioning among life history stages. Site selection was biased towards sample sites which favored high bull trout fry capture success. Comparison of fry density estimates replicated across both the preliminary survey (1997) and the current study (Cope and Morris 2001) illustrate the stable nature of these high densities. Bull trout populations have been shown to be extremely susceptible to habitat degradation and over-harvest and are ecologically

Identifying linkages between land use, geomorphology, and aquatic habitat in a mixed-use watershed.

Science.gov (United States)

McIlroy, Susan K; Montagne, Cliff; Jones, Clain A; McGlynn, Brian L

2008-11-01

The potential impacts of land use on large woody debris (LWD) were examined in Sourdough Creek Watershed, a rapidly growing area encompassing Bozeman, Montana, USA. We identified six land classes within a 250 m buffer extending on either side of Sourdough Creek and assessed aquatic habitat and geomorphologic variables within each class. All LWD pieces were counted, and we examined 14 other variables, including undercut bank, sinuosity, and substrate composition. LWD numbers were generally low and ranged from 0 to 8.2 pieces per 50 m of stream. Linear regression showed that LWD increased with distance from headwaters, riparian forest width, and sinuosity in four of the six land classes. Statistically significant differences between land classes for many aquatic habitat and geomorphologic variables indicated the impacts of different land uses on stream structure. We also found that practices such as active wood removal played a key role in LWD abundance. This finding suggests that managers should prioritize public education and outreach concerning the importance of in-stream wood, especially in mixed-use watersheds where wood is removed for either aesthetic reasons or to prevent stream flooding.

Use of Ecohydraulic-Based Mesohabitat Classification and Fish Species Traits for Stream Restoration Design

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John S. Schwartz

2016-11-01

Full Text Available Stream restoration practice typically relies on a geomorphological design approach in which the integration of ecological criteria is limited and generally qualitative, although the most commonly stated project objective is to restore biological integrity by enhancing habitat and water quality. Restoration has achieved mixed results in terms of ecological successes and it is evident that improved methodologies for assessment and design are needed. A design approach is suggested for mesohabitat restoration based on a review and integration of fundamental processes associated with: (1 lotic ecological concepts; (2 applied geomorphic processes for mesohabitat self-maintenance; (3 multidimensional hydraulics and habitat suitability modeling; (4 species functional traits correlated with fish mesohabitat use; and (5 multi-stage ecohydraulics-based mesohabitat classification. Classification of mesohabitat units demonstrated in this article were based on fish preferences specifically linked to functional trait strategies (i.e., feeding resting, evasion, spawning, and flow refugia, recognizing that habitat preferences shift by season and flow stage. A multi-stage classification scheme developed under this premise provides the basic “building blocks” for ecological design criteria for stream restoration. The scheme was developed for Midwest US prairie streams, but the conceptual framework for mesohabitat classification and functional traits analysis can be applied to other ecoregions.

Use of multiple dispersal pathways facilitates amphibian persistence in stream networks

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Campbell, Grant E.H.; Nichols, J.D.; Lowe, W.H.; Fagan, W.F.

2010-01-01

Although populations of amphibians are declining worldwide, there is no evidence that salamanders occupying small streams are experiencing enigmatic declines, and populations of these species seem stable. Theory predicts that dispersal through multiple pathways can stabilize populations, preventing extinction in habitat networks. However, empirical data to support this prediction are absent for most species, especially those at risk of decline. Our mark-recapture study of stream salamanders reveals both a strong upstream bias in dispersal and a surprisingly high rate of overland dispersal to adjacent headwater streams. This evidence of route-dependent variation in dispersal rates suggests a spatial mechanism for population stability in headwater-stream salamanders. Our results link the movement behavior of stream salamanders to network topology, and they underscore the importance of identifying and protecting critical dispersal pathways when addressing region-wide population declines.

Use of multiple dispersal pathways facilitates amphibian persistence in stream networks.

Science.gov (United States)

Campbell Grant, Evan H; Nichols, James D; Lowe, Winsor H; Fagan, William F

2010-04-13

Although populations of amphibians are declining worldwide, there is no evidence that salamanders occupying small streams are experiencing enigmatic declines, and populations of these species seem stable. Theory predicts that dispersal through multiple pathways can stabilize populations, preventing extinction in habitat networks. However, empirical data to support this prediction are absent for most species, especially those at risk of decline. Our mark-recapture study of stream salamanders reveals both a strong upstream bias in dispersal and a surprisingly high rate of overland dispersal to adjacent headwater streams. This evidence of route-dependent variation in dispersal rates suggests a spatial mechanism for population stability in headwater-stream salamanders. Our results link the movement behavior of stream salamanders to network topology, and they underscore the importance of identifying and protecting critical dispersal pathways when addressing region-wide population declines.

Stream temperature variability: why it matters to salmon

Science.gov (United States)

E. Ashley Steel; Brian Beckman; Marie Oliver

2014-01-01

Salmon evolved in natural river systems, where temperatures fluctuate daily, weekly, seasonally, and all along a stream’s path—from the mountains to the sea. Climate change and human activities alter this natural variability. Dams, for example, tend to reduce thermal fluctuations.Currently, scientists gauge habitat suitability for aquatic species by...

Evaluating the accotink creek restoration project for improving water quality, in-stream habitat, and bank stability

Science.gov (United States)

Struck, S.D.; Selvakumar, A.; Hyer, K.; O'Connor, T.

2007-01-01

Increased urbanization results in a larger percentage of connected impervious areas and can contribute large quantities of stormwater runoff and significant quantities of debris and pollutants (e.g., litter, oils, microorganisms, sediments, nutrients, organic matter, and heavy metals) to receiving waters. To improve water quality in urban and suburban areas, watershed managers often incorporate best management practices (BMPs) to reduce the quantity of runoff as well as to minimize pollutants and other stressors contained in stormwater runoff. It is well known that land-use practices directly impact urban streams. Stream flows in urbanized watersheds increase in magnitude as a function of impervious area and can result in degradation of the natural stream channel morphology affecting the physical, chemical, and biological integrity of the stream. Stream bank erosion, which also increases with increased stream flows, can lead to bank instability, property loss, infrastructure damage, and increased sediment loading to the stream. Increased sediment loads may lead to water quality degradation downstream and have negative impacts on fish, benthic invertebrates, and other aquatic life. Accotink Creek is in the greater Chesapeake Bay and Potomac watersheds, which have strict sediment criteria. The USEPA (United States Environmental Protection Agency) and USGS (United States Geological Survey) are investigating the effectiveness of stream restoration techniques as a BMP to decrease sediment load and improve bank stability, biological integrity, and in-stream water quality in an impaired urban watershed in Fairfax, Virginia. This multi-year project continuously monitors turbidity, specific conductance, pH, and water temperature, as well as biological and chemical water quality parameters. In addition, physical parameters (e.g., pebble counts, longitudinal and cross sectional stream surveys) were measured to assess geomorphic changes associated with the restoration. Data

Summer habitat use by Columbia River redband trout in the Kootenai River drainage, Montana

Science.gov (United States)

Muhlfeld, Clint C.; Bennett, David H.

2001-01-01

The reported decline in the abundance, distribution, and genetic diversity of Columbia River redband trout Oncorhynchus mykiss gairdneri (a rainbow trout subspecies) has prompted fisheries managers to investigate their habitat requirements, identify critical habitat, and develop effective conservation and recovery programs. We analyzed the microhabitat, mesohabitat, and macrohabitat use and distribution of Columbia River redband trout by means of snorkel surveys in two watersheds in the Kootenai River drainage, Montana and Idaho, during the summers of 1997 and 1998. Juvenile (36–125 mm total length, TL) and adult (>=126 mm TL) fish preferred deep microhabitats (>=0.4 m) with low to moderate velocities (thalweg. Conversely, age-0 (<=35 mm) fish selected slow water (<=0.1 m/s) and shallow depths (<=0.2 m) located in lateral areas of the channel. Age-0, juvenile, and adult fish strongly selected pool mesohabitats and avoided riffles; juveniles and adults generally used runs in proportion to their availability. At the macrohabitat scale, density of Columbia River redband trout (35 mm) was positively related to the abundance of pools and negatively related to stream gradient. The pool: riffle ratio, gradient, and stream size combined accounted for 80% of the variation in density among 23 stream reaches in five streams. Our results demonstrate that low-gradient, medium-elevation reaches with an abundance of complex pools are critical areas for the production of Columbia River redband trout. These data will be useful in assessing the impacts of land-use practices on the remaining populations and may assist with habitat restoration or enhancement efforts.

Habitat Quality and Anadromous Fish Production on the Warm Springs Reservation. Final Report.

Energy Technology Data Exchange (ETDEWEB)

Fritsch, Mark A.

1995-06-01

The number of anadromous fish returning to the Columbia River and its tributaries has declined sharply in recent years. Changes in their freshwater, estuarine, and ocean environments and harvest have all contributed to declining runs of anadromous fish. Restoration of aquatic resources is of paramount importance to the Confederated Tribes of the Warm Springs (CTWS) Reservation of Oregon. Watersheds on the Warm Springs Reservation provide spawning and rearing habitat for several indigenous species of resident and anadromous fish. These streams are the only ones in the Deschutes River basin that still sustain runs of wild spring chinook salmon, Oncorhynchus, tshawytscha. Historically, reservation streams supplied over 169 km of anadromous fish habitat. Because of changes in flows, there are now only 128 km of habitat that can be used on the reservation. In 1981, the CTWS began a long-range, 3-phase study of existing and potential fish resources on the reservation. The project, consistent with the Northwest Power Planning Council`s Fish and Wildlife Program, was designed to increase the natural production of anadromous salmonids on the reservation.

Habitat quality and anadromous fish production on the Warm Springs Reservation. Final report

International Nuclear Information System (INIS)

Fritsch, M.A.

1995-06-01

The number of anadromous fish returning to the Columbia River and its tributaries has declined sharply in recent years. Changes in their freshwater, estuarine, and ocean environments and harvest have all contributed to declining runs of anadromous fish. Restoration of aquatic resources is of paramount importance to the Confederated Tribes of the Warm Springs (CTWS) Reservation of Oregon. Watersheds on the Warm Springs Reservation provide spawning and rearing habitat for several indigenous species of resident and anadromous fish. These streams are the only ones in the Deschutes River basin that still sustain runs of wild spring chinook salmon, Oncorhynchus, tshawytscha. Historically, reservation streams supplied over 169 km of anadromous fish habitat. Because of changes in flows, there are now only 128 km of habitat that can be used on the reservation. In 1981, the CTWS began a long-range, 3-phase study of existing and potential fish resources on the reservation. The project, consistent with the Northwest Power Planning Council's Fish and Wildlife Program, was designed to increase the natural production of anadromous salmonids on the reservation

John Day River Subbasin Fish Habitat Enhancement Project, 2002 Annual Report.

Energy Technology Data Exchange (ETDEWEB)

Powell, Russ M.; Jerome, James P.; Delano, Kenneth H.

2003-03-01

Work undertaken in 2002 included: (1) Seven new fence projects were completed thereby protecting 6.0 miles of stream (2) Completion of 0.7 miles of dredge tail leveling on Granite Creek. (3) New fence construction (300ft) plus one watergap on Indian Creek/ Kuhl property. (4) Maintenance of all active project fences (58.76 miles), watergaps (56), spring developments (32) and plantings were checked and repairs performed. (5) Restoration and Enhancement projects protected 3 miles of stream within the basin. (6) Since the initiation of the Fish Habitat Project in 1984 we have 67.21 miles of stream protected using 124.2 miles of fence. With the addition of the Restoration and Enhancement Projects we have 199.06 miles of fence protecting 124.57 miles of stream.

Longitudinal habitat disruption in Neotropical streams: fish assemblages under the influence of culverts

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José Roberto Mariano

Full Text Available This study assessed differences in fish assemblages existing upstream and downstream two types of culverts, one on each of two different Neotropical streams. We analyzed the composition and structure of the ichthyofauna and tested for spatial patterns. Fish sampling was carried out monthly between November 2009 and October 2010 using different fishing gears. We collected 2,220 fish of 33 species; 901 in stretches of the Lopeí stream - circular culvert and 1,310 in stretches of the Pindorama stream - box culvert. Fish abundance was similar in upstream and downstream stretches of the circular culvert, whereas it was slightly higher in the upstream than downstream stretch for the box culvert. Characiformes predominated in the upstream stretch of both culverts. On the other hand, Siluriformes was abundant in the downstream stretch of the circular culvert, with similar abundance in the stretches of the box culvert. Species richness and diversity (Shannon-Weiner Index were higher in the downstream stretch of the circular culvert, but they were similar in both stretches of the box culvert. The most abundant species were Astyanax altiparanae, A. paranae, A. fasciatus, Ancistrus sp., and Hypostomus sp. The last two species were more abundant in the downstream stretch of the circular culvert, and similar in stretches of the box culvert. Our study indicated variations in the species abundance, richness, and diversity between upstream and downstream stretches in particular of the circular culvert in the Lopeí stream, suggesting that fish movements are restrained more intensively in this culvert, especially for Siluriformes. The drop in the circular culvert outlet probably created passage barriers especially for those fish that has no ability to jump, where downstream erosion could lead to culvert perching. Studies on appropriate road crossing design or installation are fundamental whereas improvements in these structures can restore the connectivity of

Brook trout use of thermal refugia and foraging habitat influenced by brown trout

Science.gov (United States)

Hitt, Nathaniel P.; Snook, Erin; Massie, Danielle L.

2017-01-01

The distribution of native brook trout (Salvelinus fontinalis) in eastern North America is often limited by temperature and introduced brown trout (Salmo trutta), the relative importance of which is poorly understood but critical for conservation and restoration planning. We evaluated effects of brown trout on brook trout behavior and habitat use in experimental streams across increasing temperatures (14–23 °C) with simulated groundwater upwelling zones providing thermal refugia (6–9 °C below ambient temperatures). Allopatric and sympatric trout populations increased their use of upwelling zones as ambient temperatures increased, demonstrating the importance of groundwater as thermal refugia in warming streams. Allopatric brook trout showed greater movement rates and more even spatial distributions within streams than sympatric brook trout, suggesting interference competition by brown trout for access to forage habitats located outside thermal refugia. Our results indicate that removal of introduced brown trout may facilitate native brook trout expansion and population viability in downstream reaches depending in part on the spatial configuration of groundwater upwelling zones.

The Importance of Providing Multiple-Channel Sections in Dredging Activities to Improve Fish Habitat Environments

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Hung-Pin Chiu

2016-01-01

Full Text Available After Typhoon Morakot, dredging engineering was conducted while taking the safety of humans and structures into consideration, but partial stream reaches were formed in the multiple-channel sections in Cishan Stream because of anthropogenic and natural influences. This study mainly explores the distribution of each fish species in both the multiple- and single-channel sections in the Cishan Stream. Parts of the environments did not exhibit significant differences according to a one-way ANOVA comparing the multiple- and single-channel sections, but certain areas of the multiple-channel sections had more diverse habitats. Each fish species was widely distributed by non-metric multidimensional scaling in the multiple-channel sections as compared to those in the single-channel sections. In addition, according to the principal component analysis, each fish species has a preferred environment, and all of them have a wide choice of habitat environments in the multiple-channel sections. Finally, the existence of multiple-channel sections could significantly affect the existence of the fish species under consideration in this study. However, no environmental factors were found to have an influence on fish species in the single-channel sections, with the exception of Rhinogobius nantaiensis. The results show that providing multiple-channel sections in dredging activities could improve fish habitat environments.

Effects of Concrete Channels on Stream Biogeochemistry, Maryland Coastal Plain

Science.gov (United States)

Prestegaard, K. L.; Gilbert, L.; Phemister, K.

2005-05-01

much larger urban river channels further downstream. These downstream redox zonations, microbial habitats, and pH characteristics observed in channelized tributaries are very different from non-urban watersheds in the Maryland Coastal Plain, which have pH values less than 7 and do not have the prominent redox zonations and associated microbial habitats. These downstream changes in redox chemistry and pH in urban stream channels have implications for the transport and retention of heavy metals in urban streams.

Walla Walla River Basin Fish Habitat Enhancement Project, 2002-2003 Annual Report.

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Volkman, Jed (Confederated Tribes of the Umatilla Indian Reservation, Pendleton, OR)

2005-12-01

In 2002 and 2003, the Confederated Tribes of the Umatilla Indian Reservation (CTUIR) Fisheries Habitat Program implemented stream habitat restoration and protection efforts on private properties in the Walla Walla River Basin with funding from Bonneville Power Administration (BPA). The objective of this effort is to protect and restore habitat critical to the recovery of weak or reintroduced populations of salmonid fish. The CTUIR has currently enrolled nine properties into this program: two on Couse Creek, two adjacent properties on Blue Creek, one on Patit Creek, and four properties on the mainstem Walla Walla River. Major accomplishments during the reporting period include the following: (1) Secured approximately $229,000 in project cost share; (2) Purchase of 46 acres on the mainstem Walla Walla River to be protected perpetually for native fish and wildlife; (3) Developed three new 15 year conservation easements with private landowners; (4) Installed 3000 feet of weed barrier tarp with new plantings within project area on the mainstem Walla Walla River; (5) Expanded easement area on Couse Creek to include an additional 0.5 miles of stream corridor and 32 acres of upland habitat; (6) Restored 12 acres on the mainstem Walla Walla River and 32 acres on Couse Creek to native perennial grasses; and (7) Installed 50,000+ new native plants/cuttings within project areas.

STUDIES ON THE WHITE-CLAWED CRAYFISH (AUSTROPOTAMOBIUS PALLIPES ASSOCIATED WITH MUDDY HABITATS

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HOLDICH D. M.

2006-01-01

Full Text Available The white-clawed crayfish, Austropotamobius pallipes, is usually found associated with stony habitats containing obvious refuges in the form of gaps between and under rocks, macrophytes and marginal tree roots, particularly in streams and lakes with clear water and little marginal mud. If the banks are composed of suitable material, then they may also construct and live in burrows. However, the white-clawed crayfish is also found to be abundant in streams, rivers, canals and millraces with deep, anoxic mud and with very little aquatic vegetation. Foraging on the surface of mud may be the only way they can obtain sufficient food in the form of macroinvertebrates and decaying plant matter. Where do crayfish live in this restricted habitat? Dewatering such waterways for essential engineering works, such as desilting, bridge and weir repairs, bank reinforcements, and maintenance of outfalls can provide an excellent opportunity to study the available habitat and the crayfish populations, in addition good estimates of population size and age class distribution can be obtained, although, as with other methods, juveniles tend to be underrepresented. A number of case studies will be given to illustrate the fact that white-clawed crayfish are able to colonize muddy habitats in some numbers. The value of retaining trees with their roots hanging into waterways as a refuge for both crayfish and small fish is highlighted.

An Application of BLM's Riparian Inventory Procedure to Rangeland Riparian Resources in the Kern and Kaweah River Watersheds

Science.gov (United States)

Patricia Gradek; Lawrence Saslaw; Steven Nelson

1989-01-01

The Bakersfield District of the Bureau of Land Management conducted an inventory of rangeland riparian systems using a new method developed by a Bureau-wide task force to inventory, monitor and classify riparian areas. Data on vegetation composition were collected for 65 miles of streams and entered into a hierarchical vegetation classification system. Ratings of...

Diversity and richness of benthic insects in three cold desert spring-streams

Energy Technology Data Exchange (ETDEWEB)

Gaines, W.L.; Cushing, C.E. [Pacific Northwest Lab., Richland, WA (United States)

1993-05-01

The authors examined species diversity and richness in three cold desert spring-streams, and showed that species diversity was similar and species richness was lower than in similar-size streams from other and or semi-arid regions. Species diversity in the spring-streams increased with increasing stream size and substratum diversity, but declined as distance increased from the nearest large source. However, this latter relationship is difficult to quantify because the nearest large source was the Columbia River, or one of its reservoirs, that has environmental conditions very different from those found in the study streams. It is more likely that the main source of colonizers for the spring-streams studied were other nearby small springs that could provide sources or stepping stone habitats for colonizers. Species diversity declined after winter spates, and the low species diversity and richness values appear to be greatly influenced by these events.

Habitat-dependent interactions between two size-classes of juvenile steelhead in a small stream

Science.gov (United States)

Bret C. Harvey; Rodney J. Nakamoto

1997-01-01

Abstract - The presence of small steelhead (Oncorhynchus mykiss; averaging 55 mm fork length) influenced the growth of larger juvenile steelhead (90 mm fork length) during a 6-week experiment conducted in North Fork Caspar Creek, California, in summer 1994. In fenced replicate deep stream sections in this small stream, growth of the larger steelhead was greater in...

RFID-Based Asset Management for Space Habitats

Science.gov (United States)

Fink, Patrick W.

2013-01-01

Remote habitats are often densely packed - items necessary to sustain life - items necessary to conduct work center dot Inhabitant's time is often quite valuable, if not priceless. Resupply shipments can be infrequent and expensive. Inaccurate inventory knowledge can lead to unnecessary overstocking, which can lead to insufficient work and/or living volume. Not being able to find items when they are needed can present: - safety issues - morale issues. RFID technology has the potential solve a lot of these issues.

Urban development results in stressors that degrade stream ecosystems

Science.gov (United States)

Bell, Amanda H.; Coles, James F.; McMahon, Gerard; Woodside, Michael D.

2012-01-01

In 2003, eighty-three percent of Americans lived in metropolitan areas, and considerable population increases are predicted within the next 50 years. Nowhere are the environmental changes associated with urban development more evident than in urban streams. Contaminants, habitat destruction, and increasing streamflow flashiness resulting from urban development have been associated with the disruption of biological communities, particularly the loss of sensitive aquatic biota. Every stream is connected downstream to other water bodies, and inputs of contaminants and (or) sediments to streams can cause degradation downstream with adverse effects on biological communities and on economically valuable resources, such as fisheries and tourism. Understanding how algal, invertebrate, and fish communities respond to physical and chemical stressors associated with urban development can provide important clues on how multiple stressors may be managed to protect stream health as a watershed becomes increasingly urbanized. This fact sheet highlights selected findings of a comprehensive assessment by the National Water-Quality Assessment Program of the U.S. Geological Survey (USGS) of the effects of urban development on stream ecosystems in nine metropolitan study areas.

Activity Based Costing in Value Stream Mapping

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S. S. Abuthakeer

2010-12-01

Full Text Available This paper attempts to integrate Value Stream Map (VSM with the cost aspects. A value stream map provides a blueprint for implementing lean manufacturing concepts by illustrating information and materials flow in a value stream. The objective of the present work is to integrate the various cost aspects. The idea is to introduce a cost line, which enhances the clarity in decision making. The redesigned map proves to be effective in highlighting the improvement areas, in terms of quantitative data. TAKT time calculation is carried out to set the pace of production. Target cost is set as a bench mark for product cost. The results of the study indicates that implementing VSM led to reduction in the following areas: processing lead time by 34%, processing cycle time was reduced by 35%, Inventory level by 66% and product cost from Rs 137 to Rs 125. It was found that adopting VSM in a small scale industry can make significant improvements.

Environmental Monitoring, Water Quality - MO 2009 Stream Team Volunteer Water Quality Monitoring Sites (SHP)

Data.gov (United States)

NSGIC State | GIS Inventory — This data set shows the monitoring locations of trained Volunteer Water Quality Monitors. A monitoring site is considered to be a 300 foot section of stream channel....

Associations of stream geomorphic conditions and prevalence of alternative reproductive tactics among sockeye salmon populations.

Science.gov (United States)

DeFilippo, L B; Schindler, D E; Carter, J L; Walsworth, T E; Cline, T J; Larson, W A; Buehrens, T

2018-02-01

In many species, males may exhibit alternative life histories to circumvent the costs of intrasexual competition and female courtship. While the evolution and underlying genetic and physiological mechanisms behind alternative reproductive tactics are well studied, there has been less consideration of the ecological factors that regulate their prevalence. Here, we examine six decades of age composition records from thirty-six populations of sockeye salmon (Oncorhynchus nerka) to quantify associations between spawning habitat characteristics and the prevalence of precocious sneakers known as 'jacks'. Jack prevalence was independent of neutral genetic structure among stream populations, but varied among habitat types and as a function of continuous geomorphic characteristics. Jacks were more common in streams relative to beaches and rivers, and their prevalence was negatively associated with stream width, depth, elevation, slope and area, but positively related to bank cover. Behavioural observations showed that jacks made greater use of banks, wood and shallows than guard males, indicating that their reproductive success depends on the availability of such refuges. Our results emphasize the role of the physical habitat in shaping reproductive tactic frequencies among populations, likely through local adaptation in response to variable fitness expectations under different geomorphic conditions. © 2017 European Society For Evolutionary Biology. Journal of Evolutionary Biology © 2017 European Society For Evolutionary Biology.

Ecomorphology of Astyanax species in streams with different substrates

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Marcela A. Souza

2014-02-01

Full Text Available In the present study, we assessed the ecomorphology of two species of Astyanax in streams with different substrates found in the Rio São Francisco Basin. The dominant substrate of each stream was defined as either "fine" (0 to 2 mm, "gravel" (2 to 250 mm, "rock" (> 250 mm, or "leaf bank". We analyzed a total of 22 ecomorphological attributes of Astyanax intermedius Eigenmann, 1908 (127 individuals and Astyanax rivularis (Lütken, 1875 (238 individuals adults. We detected significant ecomorphological differences between the populations of A. rivularis and A. intermedius from habitats with different types of substrates. However, the two species did not show the same morphological differences depending on the type of substrate. These results confirmed the hypothesis that individuals from environments with different characteristics may have different ecomorphological patterns. Knowing that morphology is associated with habitat use and available resources, the loss of a resource or a modification in the environment may directly affect the permanence of a species, leading to a loss of morphologic diversity.

Eder Acquisition 2007 Habitat Evaluation Procedures Report.

Energy Technology Data Exchange (ETDEWEB)

Ashley, Paul R.

2008-01-01

A habitat evaluation procedures (HEP) analysis was conducted on the Eder acquisition in July 2007 to determine how many protection habitat units to credit Bonneville Power Administration (BPA) for providing funds to acquire the project site as partial mitigation for habitat losses associated with construction of Grand Coulee and Chief Joseph Dams. Baseline HEP surveys generated 3,857.64 habitat units or 1.16 HUs per acre. HEP surveys also served to document general habitat conditions. Survey results indicated that the herbaceous plant community lacked forbs species, which may be due to both livestock grazing and the late timing of the surveys. Moreover, the herbaceous plant community lacked structure based on lower than expected visual obstruction readings (VOR); likely a direct result of livestock impacts. In addition, introduced herbaceous vegetation including cultivated pasture grasses, e.g. crested wheatgrass and/or invader species such as cheatgrass and mustard, were present on most areas surveyed. The shrub element within the shrubsteppe cover type was generally a mosaic of moderate to dense shrubby areas interspersed with open grassland communities while the 'steppe' component was almost entirely devoid of shrubs. Riparian shrub and forest areas were somewhat stressed by livestock. Moreover, shrub and tree communities along the lower reaches of Nine Mile Creek suffered from lack of water due to the previous landowners 'piping' water out of the stream channel.

Potential Impacts of Climate Change on Stream Water Temperatures Across the United States

Science.gov (United States)

Ehsani, N.; Knouft, J.; Ficklin, D. L.

2017-12-01

Analyses of long-term observation data have revealed significant changes in several components of climate and the hydrological cycle over the contiguous United States during the twentieth and early twenty-first century. Mean surface air temperatures have significantly increased in most areas of the country. In addition, water temperatures are increasing in many watersheds across the United States. While there are numerous studies assessing the impact of climate change on air temperatures at regional and global scales, fewer studies have investigated the impacts of climate change on stream water temperatures. Projecting increases in water temperature are particularly important to the conservation of freshwater ecosystems. To achieve better insights into attributes regulating population and community dynamics of aquatic biota at large spatial and temporal scales, we need to establish relationships between environmental heterogeneity and critical biological processes of stream ecosystems at these scales. Increases in stream temperatures caused by the doubling of atmospheric carbon dioxide may result in a significant loss of fish habitat in the United States. Utilization of physically based hydrological-water temperature models is computationally demanding and can be onerous to many researchers who specialize in other disciplines. Using statistical techniques to analyze observational data from 1760 USGS stream temperature gages, our goal is to develop a simple yet accurate method to quantify the impacts of climate warming on stream water temperatures in a way that is practical for aquatic biologists, water and environmental management purposes, and conservation practitioners and policy-makers. Using an ensemble of five global climate models (GCMs), we estimate the potential impacts of climate change on stream temperatures within the contiguous United States based on recent trends. Stream temperatures are projected to increase across the US, but the magnitude of the

Design and methods of the Pacific Northwest Stream Quality Assessment (PNSQA), 2015

Science.gov (United States)

Sheibley, Rich W.; Morace, Jennifer L.; Journey, Celeste A.; Van Metre, Peter C.; Bell, Amanda H.; Nakagaki, Naomi; Button, Daniel T.; Qi, Sharon L.

2017-08-25

In 2015, the U.S. Geological Survey (USGS) National Water-Quality Assessment (NAWQA) project conducted the Pacific Northwest Stream Quality Assessment (PNSQA) to investigate stream quality across the western part of the Pacific Northwest. The goal of the PNSQA was to assess the health of streams in the region by characterizing multiple water-quality factors that are stressors to in-stream aquatic life and by evaluating the relation between these stressors and the condition of biological communities. The effects of urbanization and agriculture on stream quality for the Puget Lowland and Willamette Valley Level III Ecoregions were the focus of this regional study. Findings will help inform the public and policymakers about human and environmental factors that are the most critical in affecting stream quality and, thus, provide insights into possible strategies to protect or improve the health of streams in the region.Land-use data were used in the study to identify and select sites within the region that ranged in levels of urban and agricultural development. A total of 88 sites were selected across the region—69 were on streams that explicitly spanned a range of urban land use in their watersheds, 8 were on streams in agricultural watersheds, and 11 were reference sites with little or no development in their watersheds. Depending on the type of land use, sites were sampled for contaminants, nutrients, and sediment for either a 4- or 10-week period during April, May, and June 2015. This water-quality “index period” was immediately followed with an ecological survey of all sites that included stream habitat, benthic algae, benthic macroinvertebrates, and fish. Additionally, streambed sediment was collected during the ecological survey for analysis of sediment chemistry and toxicity testing.This report provides a detailed description of the specific study components and methods of the PNSQA, including (1) surveys of stream habitat and aquatic biota, (2) discrete

Survey of Beaver-related Restoration Practices in Rangeland Streams of the Western USA

Science.gov (United States)

Pilliod, David S.; Rohde, Ashley T.; Charnley, Susan; Davee, Rachael R.; Dunham, Jason B.; Gosnell, Hannah; Grant, Gordon E.; Hausner, Mark B.; Huntington, Justin L.; Nash, Caroline

2018-01-01

Poor condition of many streams and concerns about future droughts in the arid and semi-arid western USA have motivated novel restoration strategies aimed at accelerating recovery and increasing water resources. Translocation of beavers into formerly occupied habitats, restoration activities encouraging beaver recolonization, and instream structures mimicking the effects of beaver dams are restoration alternatives that have recently gained popularity because of their potential socioeconomic and ecological benefits. However, beaver dams and dam-like structures also harbor a history of social conflict. Hence, we identified a need to assess the use of beaver-related restoration projects in western rangelands to increase awareness and accountability, and identify gaps in scientific knowledge. We inventoried 97 projects implemented by 32 organizations, most in the last 10 years. We found that beaver-related stream restoration projects undertaken mostly involved the relocation of nuisance beavers. The most common goal was to store water, either with beaver dams or artificial structures. Beavers were often moved without regard to genetics, disease, or potential conflicts with nearby landowners. Few projects included post-implementation monitoring or planned for longer term issues, such as what happens when beavers abandon a site or when beaver dams or structures breach. Human dimensions were rarely considered and water rights and other issues were mostly unresolved or addressed through ad-hoc agreements. We conclude that the practice and implementation of beaver-related restoration has outpaced research on its efficacy and best practices. Further scientific research is necessary, especially research that informs the establishment of clear guidelines for best practices.

Survey of beaver-related restoration practices in rangeland streams of the western USA

Science.gov (United States)

Pilliod, David S.; Rohde, Ashley T.; Charnley, Susan; Davee, Rachael R; Dunham, Jason B.; Gosnell, Hannah; Grant, Gordon E.; Hausner, Mark B.; Huntington, Justin L.; Nash, Caroline

2018-01-01

Poor condition of many streams and concerns about future droughts in the arid and semi-arid western USA have motivated novel restoration strategies aimed at accelerating recovery and increasing water resources. Translocation of beavers into formerly occupied habitats, restoration activities encouraging beaver recolonization, and instream structures mimicking the effects of beaver dams are restoration alternatives that have recently gained popularity because of their potential socioeconomic and ecological benefits. However, beaver dams and dam-like structures also harbor a history of social conflict. Hence, we identified a need to assess the use of beaver-related restoration projects in western rangelands to increase awareness and accountability, and identify gaps in scientific knowledge. We inventoried 97 projects implemented by 32 organizations, most in the last 10 years. We found that beaver-related stream restoration projects undertaken mostly involved the relocation of nuisance beavers. The most common goal was to store water, either with beaver dams or artificial structures. Beavers were often moved without regard to genetics, disease, or potential conflicts with nearby landowners. Few projects included post-implementation monitoring or planned for longer term issues, such as what happens when beavers abandon a site or when beaver dams or structures breach. Human dimensions were rarely considered and water rights and other issues were mostly unresolved or addressed through ad-hoc agreements. We conclude that the practice and implementation of beaver-related restoration has outpaced research on its efficacy and best practices. Further scientific research is necessary, especially research that informs the establishment of clear guidelines for best practices.

The existence of Sumatran tiger (Panthera tigris sumatrae Pocock, 1929 and their prey in different forest habitat types in Kerinci Seblat National Park, Sumatra

Directory of Open Access Journals (Sweden)

YOAN DINATA

2008-07-01

Full Text Available A study on the relationships between prey animals and the occurence of sumatran tiger was conducted in Kerinci Seblat National Park, western Sumatra from May up to September 2001. The data have been collected from eight study sites based on the forest habitat types and its threats. The results showed that frequency of encounters with prey animals in different forest habitats were no difference. This might indicates that the prey animals were distributed fairly in all types of forest habitat. The frequency encounters of the sumatran tiger signs, however, have shown differently between locations. The encounters of tiger signs were more frequent in the forest habitats that close to the streams; in forest habitats with few animal huntings; and in forest habitats with no logging activities. This findings support the hypotheses that the existence of sumatran tiger as a predator is determined by the dense vegetations surrounding streams as hiding place used in an ambush; availability of prey animals as food, and habitat disturbances as shown by logging.

Evaluation of a stream channel-type system for southeast Alaska.

Science.gov (United States)

M.D. Bryant; P.E. Porter; S.J. Paustian

1991-01-01

Nine channel types within a hierarchical channel-type classification system (CTCS) were surveyed to determine relations between salmonid densities and species distribution, and channel type. Two other habitat classification systems and the amount of large woody debris also were compared to species distribution and salmonid densities, and to stream channel types....

Influence of forest and rangeland management on anadromous fish habitat in Western North America: impacts of natural events.

Science.gov (United States)

Douglas N. Swanston

1980-01-01

Natural events affecting vegetative cover and the hydrology and stability of a stream and its parent watershed are key factors influencing the quality of anadromous fish habitat. High intensity storms, drought, soil mass movement, and fire have the greatest impacts. Wind, stream icing, and the influence of insects and disease are important locally...

Resource synergy in stream periphyton communities

Energy Technology Data Exchange (ETDEWEB)

Hill, Walter [University of Illinois, Urbana-Champaign; Fanta, S.E. [University of Illinois; Roberts, Brian J [ORNL; Francoeur, Steven N. [Eastern Michigan University, Ypsilanti, MI

2011-03-01

efficient photon capture and higher photosynthetic rates. 5.Synthesis. Our results underscore the potential for resource colimitation, even in habitats where a single resource is as strongly limiting as is light in shaded streams. The capacity of autotrophic communities to respond to more than one limiting resource suggests that prevailing single-resource models of ecosystem productivity are overly simplistic.

Microhabitat and biology of Sphaerium striatinum in a central New York stream

Science.gov (United States)

Dittman, Dawn E.; Johnson, James H.; Nack, Christopher C.

2018-01-01

In many lotic systems, drastic declines in freshwater bivalve populations, including fingernail clams (Sphaeriidae), have created concerns about biodiversity and future ecosystem services. We examined the local occurrence of the historically common fingernail clam, Sphaerium striatinum, in a central New York stream. We sampled the density of sphaeriids and measured the associated habitat variables (substrate, depth, water flow) to test within-stream multivariate benthic microhabitat association. Size distribution, density, and diel feeding periodicity were measured as focal aspects of fingernail clam biology and ecology. S. striatinum tended to be found in microhabitats that had harder substrates and faster flow. The Labrador Creek fingernail clam local population had positive indicators (size distribution, density). There was significant diel periodicity in feeding behavior. The clams fed most actively during the 0400–0800 h periods. This kind of behavioral periodicity can indicate a significant ecological interaction between predators and bivalve prey. Increased understanding of the behavioral ecology of small native freshwater bivalves in an unimpacted headwater stream is a fundamental building block for development of overall ecological conservation goals for freshwater bivalves and their lotic habitats.

Basin Visual Estimation Technique (BVET) and Representative Reach Approaches to Wadeable Stream Surveys: Methodological Limitations and Future Directions

Science.gov (United States)

Lance R. Williams; Melvin L. Warren; Susan B. Adams; Joseph L. Arvai; Christopher M. Taylor

2004-01-01

Basin Visual Estimation Techniques (BVET) are used to estimate abundance for fish populations in small streams. With BVET, independent samples are drawn from natural habitat units in the stream rather than sampling "representative reaches." This sampling protocol provides an alternative to traditional reach-level surveys, which are criticized for their lack...

The safeguards active response inventory system (SARIS)

International Nuclear Information System (INIS)

Carlson, R.L.; Hairston, L.A.; O'Callaghan, P.B.; Grambihler, A.J.; Ruemmler, W.P.

1987-01-01

The Safeguards Active Response Inventory System (SARIS) is a computerized accountability system developed for nuclear materials control that incorporates elements of process monitoring, criticality safety, physical inventory and safeguards. It takes data from the process operations, stores it in an on-line database and translates the information into the formats needed by the various users. It traces the material through the process from feed to product; including recycle, waste and scraps streams. It models the process as the material changes form to ensure that artificial losses are not created. It automatically generates input to Nuclear Materials Management and Safeguards System (NMMSS), performs checks to prevent the possibility of a criticality accident, prepares an audit trail for Safeguards, prints labels for nuclear material containers, and produces DOE/NRC 741 forms. SARIS has been installed at three laboratories across the country

Investigations of Bull Trout (Salvelinus Confluentus), Steelhead Trout (Oncorhynchus Mykiss), and Spring Chinook Salmon (O. Tshawytscha) Interactions in Southeast Washington Streams : 1991 Annual Report.

Energy Technology Data Exchange (ETDEWEB)

Martin, Steven W.

1992-07-01

Bull trout (Salvelinus confluentus) are native to many tributaries of the Snake River in southeast Washington. The Washington Department of Wildlife (WDW) and the American Fisheries Society (AFS) have identified bull trout as a species of special concern which means that they may become threatened or endangered by relatively, minor disturbances to their habitat. Steelhead trout/rainbow trout (Oncorhynchus mykiss) and spring chinook salmon (O.tshawytscha) are also native to several tributaries of the Snake river in southeast Washington. These species of migratory fishes are depressed, partially due to the construction of several dams on the lower Snake river. In response to decreased run size, large hatchery program were initiated to produce juvenile steelhead and salmon to supplement repressed tributary stocks, a practice known as supplementation. There is a concern that supplementing streams with artificially high numbers of steelhead and salmon may have an impact on resident bull trout in these streams. Historically, these three species of fish existed together in large numbers, however, the amount of high-quality habitat necessary for reproduction and rearing has been severely reduced in recent years, as compared to historic amounts. The findings of the first year of a two year study aimed at identifying species interactions in southeast Washington streams are presented in this report. Data was collected to assess population dynamics; habitat utilization and preference, feeding habits, fish movement and migration, age, condition, growth, and the spawning requirements of bull trout in each of four streams. A comparison of the indices was then made between the study streams to determine if bull trout differ in the presence of the putative competitor species. Bull trout populations were highest in the Tucannon River (supplemented stream), followed by Mill Creek (unsupplemented stream). Young of the year bull trout utilized riffle and cascade habitat the most in all

Soil loss risk and habitat quality in streams of a meso-scale river basin Risco de perda de solo e qualidade do habitat numa bacia hidrográfica de meso-escala

Directory of Open Access Journals (Sweden)

Alexandre Marco da Silva

2007-08-01

Full Text Available Soil loss expectation and possible relationships among soil erosion, riparian vegetation and water quality were studied in the São José dos Dourados River basin, State of São Paulo, Brazil. Through Geographic Information System (GIS resources and technology, Soil Loss Expectation (SLE data obtained using the Universal Soil Loss Equation (USLE model were analyzed. For the whole catchment area and for the 30 m buffer strips of the streams of 22 randomly selected catchments, the predominant land use and habitat quality were studied. Owing mainly to the high soil erodibility, the river basin is highly susceptible to erosive processes. Habitat quality analyses revealed that the superficial water from the catchments is not chemically impacted but suffers physical damage. A high chemical purity is observed since there are no urban areas along the catchments. The water is physically poor because of high rates of sediment delivery and the almost nonexistence of riparian vegetation.Expectativa de perda de solo e possíveis relações entre erosão, vegetação ripária e qualidade da água foram estudados na bacia do rio São José dos Dourados (SP. Através de recursos de geoprocessamento e da Equação Universal de Perda de Solos, os dados sobre expectativa de perda de solo foram levantados. Para a área de drenagem total e a faixa tampão dos corpos d'água de 22 sub-bacias aleatoriamente selecionadas, analisou-se a cobertura do solo predominante e qualidade do habitat. Devido principalmente à alta erodibilidade do solo, a área estudada é altamente suscetível ao processo erosivo. As análises de qualidade da água revelaram que as águas superficiais das sub-bacias estão quimicamente não impactadas, mas fisicamente degradadas. A alta pureza química deve-se, possivelmente, à ausência de áreas urbanizadas ao longo das sub-bacias e as alterações nas características físicas são, possivelmente, decorrentes das altas taxas de transfer

Stream water responses to timber harvest: Riparian buffer width effectiveness

Science.gov (United States)

Barton D. Clinton

2011-01-01

Vegetated riparian buffers are critical for protecting aquatic and terrestrial processes and habitats in southern Appalachian ecosystems. In this case study, we examined the effect of riparian buffer width on stream water quality following upland forest management activities in four headwater catchments. Three riparian buffer widths were delineated prior to cutting; 0m...

ITER Dynamic Tritium Inventory Modeling Code

International Nuclear Information System (INIS)

Cristescu, Ioana-R.; Doerr, L.; Busigin, A.; Murdoch, D.

2005-01-01

A tool for tritium inventory evaluation within each sub-system of the Fuel Cycle of ITER is vital, with respect to both the process of licensing ITER and also for operation. It is very likely that measurements of total tritium inventories may not be possible for all sub-systems, however tritium accounting may be achieved by modeling its hold-up within each sub-system and by validating these models in real-time against the monitored flows and tritium streams between the systems. To get reliable results, an accurate dynamic modeling of the tritium content in each sub-system is necessary. In order to optimize the configuration and operation of the ITER fuel cycle, a dynamic fuel cycle model was developed progressively in the decade up to 2000-2001. As the design for some sub-systems from the fuel cycle (i.e. Vacuum pumping, Neutral Beam Injectors (NBI)) have substantially progressed meanwhile, a new code developed under a different platform to incorporate these modifications has been developed. The new code is taking over the models and algorithms for some subsystems, such as Isotope Separation System (ISS); where simplified models have been previously considered, more detailed have been introduced, as for the Water Detritiation System (WDS). To reflect all these changes, the new code developed inside EU participating team was nominated TRIMO (Tritium Inventory Modeling), to emphasize the use of the code on assessing the tritium inventory within ITER

John Day River Subbasin Fish Habitat Enhancement Project, 2001 Annual Report.

Energy Technology Data Exchange (ETDEWEB)

Powell, Russ M.; Delano, Kenneth H.; Jerome, James P.

2002-07-01

Work undertaken in 2001 included: (1) 3335 structure posts were pounded on six new projects thereby protecting 10 miles of stream (2) Completion of 1000 ft. of barbed wire fence and one watergap on the Middle Fork of the John Day River/ Forrest property. (3) Fence removal of 5010 ft. of barbed wire fence on the Meredith project. (4) Maintenance of all active project fences (66 miles), watergaps (76), spring developments (32) and plantings were checked and repairs performed. (5) Since the initiation of the Fish Habitat Project in 1984 we have 63.74 miles of stream protected using 106.78 miles of fence. With the addition of the Restoration and Enhancement Projects we have 180.64 miles of fence protecting 120.6 miles of stream.

Modeling wood dynamics, jam formation, and sediment storage in a gravel-bed stream

Science.gov (United States)

Eaton, B. C.; Hassan, M. A.; Davidson, S. L.

2012-12-01

In small and intermediate sized streams, the interaction between wood and bed material transport often determines the nature of the physical habitat, which in turn influences the health of the stream's ecosystem. We present a stochastic model that can be used to simulate the effects on physical habitat of forest fires, climate change, and other environmental disturbances that alter wood recruitment. The model predicts large wood (LW) loads in a stream as well as the volume of sediment stored by the wood; while it is parameterized to describe gravel bed streams similar to a well-studied field prototype, Fishtrap Creek, British Columbia, it can be calibrated to other systems as well. In the model, LW pieces are produced and modified over time as a result of random tree-fall, LW breakage, LW movement, and piece interaction to form LW jams. Each LW piece traps a portion of the annual bed material transport entering the reach and releases the stored sediment when the LW piece is entrained and moved. The equations governing sediment storage are based on a set of flume experiments also scaled to the field prototype. The model predicts wood loads ranging from 70 m3/ha to more than 300 m3/ha, with a mean value of 178 m3/ha: both the range and the mean value are consistent with field data from streams with similar riparian forest types and climate. The model also predicts an LW jam spacing that is consistent with field data. Furthermore, our modeling results demonstrate that the high spatial and temporal variability in sediment storage, sediment transport, and channel morphology associated with LW-dominated streams occurs only when LW pieces interact and form jams. Model runs that do not include jam formation are much less variable. These results suggest that river restoration efforts using engineered LW pieces that are fixed in place and not permitted to interact will be less successful at restoring the geomorphic processes responsible for producing diverse, productive

Stream Intermittency Sensors Monitor the Onset and Duration of Stream Flow Along a Channel Network During Storms

Science.gov (United States)

Jensen, C.; McGuire, K. J.

2017-12-01

estimate of flow duration in temporary streams, which field surveys may, otherwise, underestimate. Such continuous datasets on stream network length will allow researchers to more accurately assess the value of headwater reaches for contributions to environmental services such as aquatic habitat, hyporheic exchange, and mass fluxes of solutes.

Relations between altered stramflow variability and fish assemblages in Eastern USA streams

Science.gov (United States)

Meador, Michael R.; Carlisle, Daren M.

2012-01-01

Although altered streamflow has been implicated as a major factor affecting fish assemblages, understanding the extent of streamflow alteration has required quantifying attributes of the natural flow regime. We used predictive models to quantify deviation from expected natural streamflow variability for streams in the eastern USA. Sites with >25% change in mean daily streamflow variability compared with what would be expected in a minimally disturbed environment were defined as having altered streamflow variability, based on the 10th and 90th percentiles of the distribution of streamflow variability at 1279 hydrological reference sites. We also used predictive models to assess fish assemblage condition and native species loss based on the proportion of expected native fish species that were observed. Of the 97 sites, 49 (50.5%) were classified as altered with reduced streamflow variability, whereas no sites had increased streamflow variability. Reduced streamflow variability was related to a 35% loss in native fish species, on average, and a >50% loss of species with a preference for riffle habitats. Conditional probability analysis indicated that the probability of fish assemblage impairment increased as the severity of altered streamflow variability increased. Reservoir storage capacity and wastewater discharges were important predictors of reduced streamflow variability as revealed by random forest analysis. Management and conservation of streams will require careful consideration of natural streamflow variation and potential factors contributing to altered streamflow within the entire watershed to limit the loss of critical stream habitats and fish species uniquely adapted to live in those habitats.

GEOMORPHOLOGY AND ANTHROPOGENIC INFLUENCES ON FISH AND AMPHIBIANS IN PACIFIC NORTHWEST COASTAL STREAMS

Science.gov (United States)

Physical habitat degradation has been implicated as a major contributor to the historic decline of salmonids in Pacific Northwest streams. Native aquatic vertebrate assemblages in the Oregon and Washington Coast Range consist primarily of coldwater salmonids, cottids, and amphib...

Network Structure as a Modulator of Disturbance Impacts in Streams

Science.gov (United States)

Warner, S.; Tullos, D. D.

2017-12-01

This study examines how river network structure affects the propagation of geomorphic and anthropogenic disturbances through streams. Geomorphic processes such as debris flows can alter channel morphology and modify habitat for aquatic biota. Anthropogenic disturbances such as road construction can interact with the geomorphology and hydrology of forested watersheds to change sediment and water inputs to streams. It was hypothesized that the network structure of streams within forested watersheds would influence the location and magnitude of the impacts of debris flows and road construction on sediment size and channel width. Longitudinal surveys were conducted every 50 meters for 11 kilometers of third-to-fifth order streams in the H.J. Andrews Experimental Forest in the Western Cascade Range of Oregon. Particle counts and channel geometry measurements were collected to characterize the geomorphic impacts of road crossings and debris flows as disturbances. Sediment size distributions and width measurements were plotted against the distance of survey locations through the network to identify variations in longitudinal trends of channel characteristics. Thresholds for the background variation in sediment size and channel width, based on the standard deviations of sample points, were developed for sampled stream segments characterized by location as well as geomorphic and land use history. Survey locations were classified as "disturbed" when they deviated beyond the reference thresholds in expected sediment sizes and channel widths, as well as flow-connected proximity to debris flows and road crossings. River network structure was quantified by drainage density and centrality of nodes upstream of survey locations. Drainage density and node centrality were compared between survey locations with similar channel characteristic classifications. Cluster analysis was used to assess the significance of survey location, proximity of survey location to debris flows and road

Response of a Brook Trout Population and Instream Habitat to a Catastrophic Flood and Debris Flow

Science.gov (United States)

Criag N. Roghair; C. Andrew Dolloff; Martin K. Underwood

2002-01-01

In June 1995, a massive flood and debris flow impacted fish and habitat along the lower 1.9 km of the Staunton River, a headwater stream located in Shenandoah National Park, Virginia. In the area affected by debris flow, the stream bed was scoured and new substrate materials were deposited, trees were removed from a 30-m-wide band in the riparian area, and all fish...

Fragmentation alters stream fish community structure in dendritic ecological networks.

Science.gov (United States)

Perkin, Joshuah S; Gido, Keith B

2012-12-01

Effects of fragmentation on the ecology of organisms occupying dendritic ecological networks (DENs) have recently been described through both conceptual and mathematical models, but few hypotheses have been tested in complex, real-world ecosystems. Stream fishes provide a model system for assessing effects of fragmentation on the structure of communities occurring within DENs, including how fragmentation alters metacommunity dynamics and biodiversity. A recently developed habitat-availability measure, the "dendritic connectivity index" (DCI), allows for assigning quantitative measures of connectivity in DENs regardless of network extent or complexity, and might be used to predict fish community response to fragmentation. We characterized stream fish community structure in 12 DENs in the Great Plains, USA, during periods of dynamic (summer) and muted (fall) discharge regimes to test the DCI as a predictive model of fish community response to fragmentation imposed by road crossings. Results indicated that fish communities in stream segments isolated by road crossings had reduced species richness (alpha diversity) relative to communities that maintained connectivity with the surrounding DEN during summer and fall. Furthermore, isolated communities had greater dissimilarity (beta diversity) to downstream sites notisolated by road crossings during summer and fall. Finally, dissimilarity among communities within DENs decreased as a function of increased habitat connectivity (measured using the DCI) for summer and fall, suggesting that communities within highly connected DENs tend to be more homogeneous. Our results indicate that the DCI is sensitive to community effects of fragmentation in riverscapes and might be used by managers to predict ecological responses to changes in habitat connectivity. Moreover, our findings illustrate that relating structural connectivity of riverscapes to functional connectivity among communities might aid in maintaining metacommunity

Regional habitat needs of a nationally listed species, Canada Warbler (Cardellina canadensis, in Alberta, Canada

Directory of Open Access Journals (Sweden)

Jeffrey R. Ball

2016-12-01

Full Text Available Understanding factors that affect the distribution and abundance of species is critical to developing effective management plans for conservation. Our goal was to quantify the distribution and abundance of Canada Warbler (Cardellina canadensis, a threatened old-forest associate in Alberta, Canada. The Canada Warbler has declined across its range, including in Alberta where habitat loss and alteration from urban expansion, forestry, and energy development are changing the forest landscape. We used 110,427 point count survey visits from 32,287 unique survey stations to model local-level (150-m radius circular buffers and stand-level (564-m radius circular buffers habitat associations of the Canada Warbler. We found that habitat supporting higher densities of Canada Warblers was locally concentrated yet broadly distributed across Alberta's boreal forest region. Canada Warblers were most commonly associated with older deciduous forest at the local scale, particularly near small, incised streams, and greater amounts of deciduous forest at the stand scale. Predicted density was lower in other forest types and younger age classes measured at the local scale. There was little evidence that local-scale fragmentation (i.e., edges created by linear features influenced Canada Warbler abundance. However, current forestry practices in the province likely will reduce the availability of Canada Warbler habitat over time by cutting old deciduous forest stands. Our results suggest that conservation efforts aimed at Canada Warbler focus on retaining large stands of old deciduous forest, specifically stands adjacent to streams, by increasing the width of deciduous retention buffers along streams during harvest and increasing the size and number of old forest residual patches in harvested stands.

Modeling habitat split: landscape and life history traits determine amphibian extinction thresholds.

Directory of Open Access Journals (Sweden)

Carlos Roberto Fonseca

Full Text Available Habitat split is a major force behind the worldwide decline of amphibian populations, causing community change in richness and species composition. In fragmented landscapes, natural remnants, the terrestrial habitat of the adults, are frequently separated from streams, the aquatic habitat of the larvae. An important question is how this landscape configuration affects population levels and if it can drive species to extinction locally. Here, we put forward the first theoretical model on habitat split which is particularly concerned on how split distance - the distance between the two required habitats - affects population size and persistence in isolated fragments. Our diffusive model shows that habitat split alone is able to generate extinction thresholds. Fragments occurring between the aquatic habitat and a given critical split distance are expected to hold viable populations, while fragments located farther away are expected to be unoccupied. Species with higher reproductive success and higher diffusion rate of post-metamorphic youngs are expected to have farther critical split distances. Furthermore, the model indicates that negative effects of habitat split are poorly compensated by positive effects of fragment size. The habitat split model improves our understanding about spatially structured populations and has relevant implications for landscape design for conservation. It puts on a firm theoretical basis the relation between habitat split and the decline of amphibian populations.

Modeling habitat split: landscape and life history traits determine amphibian extinction thresholds.

Science.gov (United States)

Fonseca, Carlos Roberto; Coutinho, Renato M; Azevedo, Franciane; Berbert, Juliana M; Corso, Gilberto; Kraenkel, Roberto A

2013-01-01

Habitat split is a major force behind the worldwide decline of amphibian populations, causing community change in richness and species composition. In fragmented landscapes, natural remnants, the terrestrial habitat of the adults, are frequently separated from streams, the aquatic habitat of the larvae. An important question is how this landscape configuration affects population levels and if it can drive species to extinction locally. Here, we put forward the first theoretical model on habitat split which is particularly concerned on how split distance - the distance between the two required habitats - affects population size and persistence in isolated fragments. Our diffusive model shows that habitat split alone is able to generate extinction thresholds. Fragments occurring between the aquatic habitat and a given critical split distance are expected to hold viable populations, while fragments located farther away are expected to be unoccupied. Species with higher reproductive success and higher diffusion rate of post-metamorphic youngs are expected to have farther critical split distances. Furthermore, the model indicates that negative effects of habitat split are poorly compensated by positive effects of fragment size. The habitat split model improves our understanding about spatially structured populations and has relevant implications for landscape design for conservation. It puts on a firm theoretical basis the relation between habitat split and the decline of amphibian populations.

Seasonal size distribution of three-spined stickleback in an intermittent/perennial stream system

Science.gov (United States)

To better understand patterns of habitat use by fish in an intermittent stream, we have been investigating the early life history of three-spined stickleback (Gasterosteus aculeatus). We collected three-spined stickleback and other fishes using dipnets, seines and minnow traps ...

Floristic and ecological characterization of habitat types on an inselberg in Minas Gerais, southeastern Brazil

Directory of Open Access Journals (Sweden)

Luiza F. A. de Paula

Full Text Available ABSTRACT Inselbergs are granitic or gneissic rock outcrops, distributed mainly in tropical and subtropical regions. They are considered terrestrial islands because of their strong spatial and ecological isolation, thus harboring a set of distinct plant communities that differ from the surrounding matrix. In Brazil, inselbergs scattered in the Atlantic Forest contain unusually high levels of plant species richness and endemism. This study aimed to inventory species of vascular plants and to describe the main habitat types found on an inselberg located in the state of Minas Gerais, in southeastern Brazil. A total of 89 species of vascular plants were recorded (belonging to 37 families, of which six were new to science. The richest family was Bromeliaceae (10 spp., followed by Cyperaceae (seven spp., Orchidaceae and Poaceae (six spp. each. Life forms were distributed in different proportions between habitats, which suggested distinct microenvironments on the inselberg. In general, habitats under similar environmental stress shared common species and life-form proportions. We argue that floristic inventories are still necessary for the development of conservation strategies and management of the unique vegetation on inselbergs in Brazil.

Evaluating methods to establish habitat suitability criteria: A case study in the upper Delaware River Basin, USA

Science.gov (United States)

Galbraith, Heather S.; Blakeslee, Carrie J.; Cole, Jeffrey C.; Talbert, Colin; Maloney, Kelly O.

2016-01-01

Defining habitat suitability criteria (HSC) of aquatic biota can be a key component to environmental flow science. HSC can be developed through numerous methods; however, few studies have evaluated the consistency of HSC developed by different methodologies. We directly compared HSC for depth and velocity developed by the Delphi method (expert opinion) and by two primary literature meta-analyses (literature-derived range and interquartile range) to assess whether these independent methods produce analogous criteria for multiple species (rainbow trout, brown trout, American shad, and shallow fast guild) and life stages. We further evaluated how these two independently developed HSC affect calculations of habitat availability under three alternative reservoir management scenarios in the upper Delaware River at a mesohabitat (main channel, stream margins, and flood plain), reach, and basin scale. In general, literature-derived HSC fell within the range of the Delphi HSC, with highest congruence for velocity habitat. Habitat area predicted using the Delphi HSC fell between the habitat area predicted using two literature-derived HSC, both at the basin and the site scale. Predicted habitat increased in shallow regions (stream margins and flood plain) using literature-derived HSC while Delphi-derived HSC predicted increased channel habitat. HSC generally favoured the same reservoir management scenario; however, no favoured reservoir management scenario was the most common outcome when applying the literature range HSC. The differences found in this study lend insight into how different methodologies can shape HSC and their consequences for predicted habitat and water management decisions. Published 2016. This article is a U.S. Government work and is in the public domain in the USA.

Small mammal populations in a restored stream corridor

International Nuclear Information System (INIS)

Wike, L.D.

2000-01-01

An opportunity to study the response of a small mammal community to restoration of a riparian wetland was provided by the Pen Branch project at the Savannah River Site (SRS). Live trapping of small mammals was conducted on six transects at Pen Branch in 1996 and 1998 and at three transects at Meyer's Branch, an unimpacted stream at SRS, in 1997 and 1998. Distributions of rates of capture of the four most common species were both spatially and temporally uneven. Kruskal-Wallis one-way analysis of variance found no significant differences in the relationship of capture rates between species and between treatment and both the within-stream control and Meyers Branch. Habitat use and movement within stream corridors appears to be dependent primarily on species, with age and sex perhaps contributing to preference and distance moved. The lack of differences in capture rates related to transect or treatment may be due to the close proximity of sample transects relative to the movement potential of the species sampled

Vegetation Description, Rare Plant Inventory, and Vegetation Monitoring for Craig Mountain, Idaho.

Energy Technology Data Exchange (ETDEWEB)

Mancuso, Michael; Moseley, Robert

1994-12-01

The Craig Mountain Wildlife Mitigation Area was purchased by Bonneville Power Administration (BPA) as partial mitigation for wildlife losses incurred with the inundation of Dworshak Reservoir on the North Fork Clearwater River. Upon completion of the National Environmental Protection Act (NEPA) process, it is proposed that title to mitigation lands will be given to the Idaho Department of Fish and Game (IDFG). Craig Mountain is located at the northern end of the Hells Canyon Ecosystem. It encompasses the plateau and steep canyon slopes extending from the confluence of the Snake and Salmon rivers, northward to near Waha, south of Lewiston, Idaho. The forested summit of Craig Mountain is characterized by gently rolling terrain. The highlands dramatically break into the canyons of the Snake and Salmon rivers at approximately the 4,700 foot contour. The highly dissected canyons are dominated by grassland slopes containing a mosaic of shrubfield, riparian, and woodland habitats. During the 1993 and 1994 field seasons, wildlife, habitat/vegetation, timber, and other resources were systematically inventoried at Craig Mountain to provide Fish and Game managers with information needed to draft an ecologically-based management plan. The results of the habitat/vegetation portion of the inventory are contained in this report. The responsibilities for the Craig Mountain project included: (1) vegetation data collection, and vegetation classification, to help produce a GIS-generated Craig Mountain vegetation map, (2) to determine the distribution and abundance of rare plants populations and make recommendations concerning their management, and (3) to establish a vegetation monitoring program to evaluate the effects of Fish and Game management actions, and to assess progress towards meeting habitat mitigation goals.

Vegetation description, rare plant inventory, and vegetation monitoring for Craig Mountain, Idaho

International Nuclear Information System (INIS)

Mancuso, M.; Moseley, R.

1994-12-01

The Craig Mountain Wildlife Mitigation Area was purchased by Bonneville Power Administration (BPA) as partial mitigation for wildlife losses incurred with the inundation of Dworshak Reservoir on the North Fork Clearwater River. Upon completion of the National Environmental Protection Act (NEPA) process, it is proposed that title to mitigation lands will be given to the Idaho Department of Fish and Game (IDFG). Craig Mountain is located at the northern end of the Hells Canyon Ecosystem. It encompasses the plateau and steep canyon slopes extending from the confluence of the Snake and Salmon rivers, northward to near Waha, south of Lewiston, Idaho. The forested summit of Craig Mountain is characterized by gently rolling terrain. The highlands dramatically break into the canyons of the Snake and Salmon rivers at approximately the 4,700 foot contour. The highly dissected canyons are dominated by grassland slopes containing a mosaic of shrubfield, riparian, and woodland habitats. During the 1993 and 1994 field seasons, wildlife, habitat/vegetation, timber, and other resources were systematically inventoried at Craig Mountain to provide Fish and Game managers with information needed to draft an ecologically-based management plan. The results of the habitat/vegetation portion of the inventory are contained in this report. The responsibilities for the Craig Mountain project included: (1) vegetation data collection, and vegetation classification, to help produce a GIS-generated Craig Mountain vegetation map, (2) to determine the distribution and abundance of rare plants populations and make recommendations concerning their management, and (3) to establish a vegetation monitoring program to evaluate the effects of Fish and Game management actions, and to assess progress towards meeting habitat mitigation goals

US Department of Energy interim mixed waste inventory report: Waste streams, treatment capacities and technologies: Volume 3, Site specific---Illinois through New York

International Nuclear Information System (INIS)

1993-04-01

The Department of Energy (DOE) has prepared this report to provide an inventory of its mixed wastes and treatment capacities and technologies in response to Section 105(a) of the Federal Facility Compliance act (FFCAct) of 1992 (Pub. L. No. 102-386). As required by the FFCAct-1992, this report provides site-specific information on DOE's mixed waste streams and a general review of available and planned treatment facilities for mixed wastes for the following sites: Argonne National Laboratory-East; Site A/plot M in Palos Forest Preserve, Illinois; Ames Laboratory; Paducah Gaseous Diffusion Plant; Portsmouth Naval Shipyard; Kansas City Plant; University of Missouri; Weldon Springs Site, St. Charles, Missouri; Nevada Test Site; Middlesex Sampling Plant, Middlesex, New Jersey; Princeton Plasma Physics Laboratory; LANL; Sandia national laboratory; Brookhaven National Laboratory; Colonie Interim Storage Site, Colonie, New York; Knolls Atomic Power Laboratory; Knolls Atomic Power Laboratory-Kesselring Site; and West Valley Demonstration Project

Using macroinvertebrate assemblages and multiple stressors to infer urban stream system condition: A case study in the central US

Science.gov (United States)

Nichols, John W.; Hubbart, Jason A.; Poulton, Barry C.

2016-01-01

Characterizing the impacts of hydrologic alterations, pollutants, and habitat degradation on macroinvertebrate species assemblages is of critical value for managers wishing to categorize stream ecosystem condition. A combination of approaches including trait-based metrics and traditional bioassessments provides greater information, particularly in anthropogenic stream ecosystems where traditional approaches can be confounded by variously interacting land use impacts. Macroinvertebrates were collected from two rural and three urban nested study sites in central Missouri, USA during the spring and fall seasons of 2011. Land use responses of conventional taxonomic and trait-based metrics were compared to streamflow indices, physical habitat metrics, and water quality indices. Results show that biotic index was significantly different (p habitats in urban reaches contained 21 % more (p = 0.03) multivoltine organisms, which was positively correlated to the magnitude of peak flows (r2 = 0.91, p = 0.012) suggesting that high flow events may serve as a disturbance in those areas. Results support the use of macroinvertebrate assemblages and multiple stressors to characterize urban stream system condition and highlight the need to better understand the complex interactions of trait-based metrics and anthropogenic aquatic ecosystem stressors.

ADULT COHO SALMON AND STEELHEAD USE OF BOULDER WEIRS IN SOUTHWEST OREGON STREAMS

Science.gov (United States)

The placement of log and boulder structures in streams is a common and often effective technique for improving juvenile salmonid rearing habitat and increasing fish densities. Less frequently examined has been the use of these structures by adult salmonids. In 2004, spawner densi...

The 1986 United Kingdom radioactive waste inventory

International Nuclear Information System (INIS)

Shepherd, J.; Harrison, J.; McNicholas, P.

1987-11-01

This report gives information on the radioactive wastes which arise in the United Kingdom, updated to 1 January 1986. It has been compiled from information provided by the principal producers of the wastes, Amersham International plc, British Nuclear Fuels plc, the Central Electricity Generating Board, the South of Scotland Electricity Board, and the United Kingdom Atomic Energy Authority. The report lists the waste types, or streams, which these organisations produce, or will produce, as part of their normal operations or from decommissioning of their plant. For each stream is given the volume (or in a few cases mass) of existing stocks, estimated arisings to the year 2030 (2080 in the case of some decommissioning wastes), specific activity, and conditioning factor (volume change from ''raw'' waste volume to volume conditioned for disposal). Details of the radionuclide compositions of individual waste streams are separately listed. Waste streams are allocated to one of the three categories High, Intermediate or Low-Level, although this does not necessarily imply any commitment to a particular disposal route. The report includes tables summarising the data, arranged in a hierarchical manner to enable totals to be readily extracted as required. Summary tables of both ''raw'' and ''conditioned'' waste volumes are given. Also included are a commentary on the data and important changes from the 1985 inventory, and information on scenarios on which estimates of future arisings are based. (author)

Soil Erosion from Agriculture and Mining: A Threat to Tropical Stream Ecosystems

Directory of Open Access Journals (Sweden)

Jan H. Mol

2013-09-01

Full Text Available In tropical countries soil erosion is often increased due to high erodibility of geologically old and weathered soils; intensive rainfall; inappropriate soil management; removal of forest vegetation cover; and mining activities. Stream ecosystems draining agricultural or mining areas are often severely impacted by the high loads of eroded material entering the stream channel; increasing turbidity; covering instream habitat and affecting the riparian zone; and thereby modifying habitat and food web structures. The biodiversity is severely threatened by these negative effects as the aquatic and riparian fauna and flora are not adapted to cope with excessive rates of erosion and sedimentation. Eroded material may also be polluted by pesticides or heavy metals that have an aggravating effect on functions and ecosystem services. Loss of superficial material and deepening of erosion gullies impoverish the nutrient and carbon contents of the soils; and lower the water tables; causing a “lose-lose” situation for agricultural productivity and environmental integrity. Several examples show how to interrupt this vicious cycle by integrated catchment management and by combining “green” and “hard” engineering for habitat restoration. In this review; we summarize current findings on this issue from tropical countries with a focus on case studies from Suriname and Brazil.

Spatial simulation of smallmouth bass in streams

International Nuclear Information System (INIS)

Jager, H.I.; Schmoyer, D.D.; Sale, M.J.; Van Winkle, W.; DeAngelis, D.L.; Sabo, M.J.

1993-01-01

The hydropower industry and its regulators are hampered by the inability to predict the relationship between alternative flow regimes and fish population response. We have developed a spatially explicit, individual-based model of populations of small-mouth bass in streams as part of the Compensatory Mechanisms in Fish Populations Program (see Sale and Otto 1991). In the model, the profitability of alternative stream locations varies in response to habitat depth and velocity through changes in the frequency of prey encounters and the metabolic costs experienced by fish. We conducted an evaluation of our hydraulic simulation at the scale of individual stream cells. The potential error in predictions for individual cell velocities suggests that larger-scale model predictions for the representative reach are most appropriate. At this scale, the model appears to produce realistic patterns in the growth and dispersal of young-of-year small-mouth bass. This verification step allows us to proceed with greater confidence in evaluating the original question of how small-mouth bass populations respond to alternative flow regimes

Testing common stream sampling methods for broad-scale, long-term monitoring

Science.gov (United States)

Eric K. Archer; Brett B. Roper; Richard C. Henderson; Nick Bouwes; S. Chad Mellison; Jeffrey L. Kershner

2004-01-01

We evaluated sampling variability of stream habitat sampling methods used by the USDA Forest Service and the USDI Bureau of Land Management monitoring program for the upper Columbia River Basin. Three separate studies were conducted to describe the variability of individual measurement techniques, variability between crews, and temporal variation throughout the summer...

A landscape perspective of the stream corridor invasion and habitat characteristics of an exotic (Dioscorea oppositifolia) in a pristine watershed in Illinois

Science.gov (United States)

Thomas, J.R.; Middleton, B.; Gibson, D.J.

2006-01-01

The spatial distribution of exotics across riparian landscapes is not uniform, and research elaborating the environmental constraints and dispersal behavior that underlie these patterns of distribution is warranted. This study examined the spatial distribution, growth patterns, and habitat constraints of populations of the invasive Dioscorea oppositifolia in a forested stream corridor of a tributary of Drury Creek in Giant City State Park, IL. The distribution of D. oppositifolia was determined at the watershed scale mainly by floodplain structure and connectivity. Populations of D. oppositifolia were confined to the floodplain, with overbank flooding from the stream. Dioscorea oppositifolia probably originates in disturbed areas upstream of natural corridors, and subsequently, the species disperses downstream into pristine canyons or ravines via bulbils dispersing in the water. In Giant City State Park, populations of D. oppositifolia were distributed on the floodplain across broad gradients of soil texture, light, slope, and potential radiation. The study also examined the longevity of bulbils in various micro-environments to illuminate strategies for the management of the species in invaded watersheds. After 1 year, the highest percentages of bulbils were viable under leaves, and much lower percentages were viable over leaves, in soil, and in the creek (76.0??6.8, 21.2??9.6, 21.6??3.6, and 5.2??5.2%), respectively. This study suggests that management procedures that reduce leaf litter on the forest floor (e.g., prescribed burning) could reduce the number of bulbils of D. oppositifolia stored in the watershed. ?? Springer 2006.

Retailer's optimal credit period and cycle time in a supply chain for deteriorating items with up-stream and down-stream trade credits

Science.gov (United States)

Mahata, Gour Chandra

2015-09-01

In practice, the supplier often offers the retailers a trade credit period and the retailer in turn provides a trade credit period to her/his customer to stimulate sales and reduce inventory. From the retailer's perspective, granting trade credit not only increases sales and revenue but also increases opportunity cost (i.e., the capital opportunity loss during credit period) and default risk (i.e., the percentage that the customer will not be able to pay off his/her debt obligations). Hence, how to determine credit period is increasingly recognized as an important strategy to increase retailer's profitability. Also, the selling items such as fruits, fresh fishes, gasoline, photographic films, pharmaceuticals and volatile liquids deteriorate continuously due to evaporation, obsolescence and spoilage. In this paper, we propose an economic order quantity model for the retailer where (1) the supplier provides an up-stream trade credit and the retailer also offers a down-stream trade credit, (2) the retailer's down-stream trade credit to the buyer not only increases sales and revenue but also opportunity cost and default risk, and (3) the selling items are perishable. Under these conditions, we model the retailer's inventory system as a profit maximization problem to determine the retailer's optimal replenishment decisions under the supply chain management. We then show that the retailer's optimal credit period and cycle time not only exist but also are unique. We deduce some previously published results of other researchers as special cases. Finally, we use some numerical examples to illustrate the theoretical results.

Evaluating the impact of irrigation on surface water - groundwater interaction and stream temperature in an agricultural watershed.

Science.gov (United States)

Essaid, Hedeff I; Caldwell, Rodney R

2017-12-01

relative to natural PreIrr conditions improving fish thermal habitat. However, the decrease in groundwater discharge in the IrrGW scenario resulting from large-scale groundwater withdrawal for irrigation led to warmer than natural stream temperatures and possible degradation of fish habitat. Published by Elsevier B.V.

Does resolution of flow field observation influence apparent habitat use and energy expenditure in juvenile coho salmon?

Science.gov (United States)

Tullos, D. D.; Walter, C.; Dunham, J.

2016-12-01

This study investigated how the resolution of observation influences interpretation of how fish, juvenile Coho Salmon (Oncorhynchus kisutch), exploit the hydraulic environment in streams. Our objectives were to evaluate how spatial resolution of the flow field observation influenced: 1) the velocities considered to be representative of habitat units; 2) patterns of use of the hydraulic environment by fish; and 3) estimates of energy expenditure. We addressed these objectives using observations within a 1:1 scale physical model of a full-channel log jam in an outdoor experimental stream. Velocities were measured with Acoustic Doppler Velocimetry at a 10 cm grid spacing, whereas fish locations and tailbeat frequencies were documented over time using underwater videogrammetry. Results highlighted that resolution of observation did impact perceived habitat use and energy expenditure, as did the location of measurement within habitat units and the use of averaging to summarize velocities within a habitat unit. In this experiment, the range of velocities and energy expenditure estimates increased with coarsening resolution, reducing the likelihood of measuring the velocities locally experienced by fish. In addition, the coarser resolutions contributed to fish appearing to select velocities that were higher than what was measured at finer resolutions. These findings indicate the need for careful attention to and communication of resolution of observation in investigating the hydraulic environment and in determining the habitat needs and bioenergetics of aquatic biota.

Factors affecting competitive dominance of rainbow trout over brook trout in southern Appalachian streams: Implications of an individual-based model

Energy Technology Data Exchange (ETDEWEB)

Clark, M.E. [Univ. of Tennessee, Knoxville, TN (United States); Rose, K.A. [Oak Ridge National Lab., TN (United States)

1997-01-01

We used an individual-based model to examine possible explanations for the dominance of rainbow trout Oncorhynchus mykiss over brook trout Salvelinus fontinalis in southern Appalachian streams. Model simulations were used to quantify the effects on interspecific competition of (1) competitive advantage for feeding sites by rainbow trout, (2) latitudinal differences in stream temperatures, flows, and daylight, (3) year-class failures, (4) lower fecundity of brook trout, and (5) reductions in spawning habitat. The model tracks the daily spawning, growth, and survival of individuals of both species throughout their lifetime in a series of connected stream habitat units (pools, runs, or riffles). Average densities of each species based on 100-year simulations were compared for several levels of each of the five factors and for sympatric and allopatric conditions. Based on model results and empirical information, we conclude that more frequent year-class failures and the lower fecundity of brook trout are both possible and likely explanations for rainbow trout dominance, that warmer temperatures due to latitude and limited spawning habitat are possible but unlikely explanations, and that competitive advantage for feeding sites by rainbow trout is an unlikely explanation. Additional field work should focus on comparative studies of the reproductive success and the early life stage mortalities of brook and rainbow trout among Appalachian streams with varying rainbow trout dominance. 53 refs., 11 figs.

Spatiotemporal patterns and habitat associations of smallmouth bass (Micropterus dolomieu) invading salmon-rearing habitat

Science.gov (United States)

Lawrence, David J.; Olden, Julian D.; Torgersen, Christian E.

2012-01-01

�km (2009 and 2010, respectively) as stream temperatures seasonally warmed, but subyearling Chinook salmon were also found farther upstream during this time.4. Our multiscale analysis suggests that bass were selecting habitat based on antecedent thermal history at a broad scale, and if satisfactory temperature conditions were met, mesoscale habitat features (i.e. channel-unit type and depth) played an additional role in determining bass abundance. The upstream extent of bass in the late summer corresponded to a high-gradient geomorphic discontinuity in the NFJDR, which probably hindered further upstream movements of bass. The habitat determinants and upstream extent of bass were largely consistent across years, despite marked differences in the magnitude and timing of spring peak flows prior to bass spawning.5. The overriding influence of water temperature on smallmouth bass distribution suggests that managers may be able limit future upstream range expansions of bass into salmon-rearing habitat by concentrating on restoration activities that mitigate climate- or land-use-related stream warming. These management activities could be prioritised to capitalise on survival bottlenecks in the life history of bass and spatially focused on landscape knick points such as high-gradient discontinuities to discourage further upstream movements of bass.

Habitat mosaics and path analysis can improve biological conservation of aquatic biodiversity in ecosystems with low-head dams.

Science.gov (United States)

Hitchman, Sean M; Mather, Martha E; Smith, Joseph M; Fencl, Jane S

2018-04-01

Conserving native biodiversity depends on restoring functional habitats in the face of human-induced disturbances. Low-head dams are a ubiquitous human impact that degrades aquatic ecosystems worldwide. To improve our understanding of how low-head dams impact habitat and associated biodiversity, our research examined complex interactions among three spheres of the total environment. i.e., how low-head dams (anthroposphere) affect aquatic habitat (hydrosphere), and native biodiversity (biosphere) in streams and rivers. Creation of lake-like habitats upstream of low-head dams is a well-documented major impact of dams. Alterations downstream of low head dams also have important consequences, but these downstream dam effects are more challenging to detect. In a multidisciplinary field study at five dammed and five undammed sites within the Neosho River basin, KS, we tested hypotheses about two types of habitat sampling (transect and mosaic) and two types of statistical analyses (analysis of covariance and path analysis). We used fish as our example of biodiversity alteration. Our research provided three insights that can aid environmental professionals who seek to conserve and restore fish biodiversity in aquatic ecosystems threatened by human modifications. First, a mosaic approach identified habitat alterations below low-head dams (e.g. increased proportion of riffles) that were not detected using the more commonly-used transect sampling approach. Second, the habitat mosaic approach illustrated how low-head dams reduced natural variation in stream habitat. Third, path analysis, a statistical approach that tests indirect effects, showed how dams, habitat, and fish biodiversity interact. Specifically, path analysis revealed that low-head dams increased the proportion of riffle habitat below dams, and, as a result, indirectly increased fish species richness. Furthermore, the pool habitat that was created above low-head dams dramatically decreased fish species richness

Habitat mosaics and path analysis can improve biological conservation of aquatic biodiversity in ecosystems with low-head dams

Science.gov (United States)

Hitchman, Sean M.; Mather, Martha E.; Smith, Joseph M.; Fencl, Jane S.

2018-01-01

Conserving native biodiversity depends on restoring functional habitats in the face of human-induced disturbances. Low-head dams are a ubiquitous human impact that degrades aquatic ecosystems worldwide. To improve our understanding of how low-head dams impact habitat and associated biodiversity, our research examined complex interactions among three spheres of the total environment. i.e., how low-head dams (anthroposphere) affect aquatic habitat (hydrosphere), and native biodiversity (biosphere) in streams and rivers. Creation of lake-like habitats upstream of low-head dams is a well-documented major impact of dams. Alterations downstream of low head dams also have important consequences, but these downstream dam effects are more challenging to detect. In a multidisciplinary field study at five dammed and five undammed sites within the Neosho River basin, KS, we tested hypotheses about two types of habitat sampling (transect and mosaic) and two types of statistical analyses (analysis of covariance and path analysis). We used fish as our example of biodiversity alteration. Our research provided three insights that can aid environmental professionals who seek to conserve and restore fish biodiversity in aquatic ecosystems threatened by human modifications. First, a mosaic approach identified habitat alterations below low-head dams (e.g. increased proportion of riffles) that were not detected using the more commonly-used transect sampling approach. Second, the habitat mosaic approach illustrated how low-head dams reduced natural variation in stream habitat. Third, path analysis, a statistical approach that tests indirect effects, showed how dams, habitat, and fish biodiversity interact. Specifically, path analysis revealed that low-head dams increased the proportion of riffle habitat below dams, and, as a result, indirectly increased fish species richness. Furthermore, the pool habitat that was created above low-head dams dramatically decreased fish species

Developing a national stream morphology data exchange: Needs, challenges, and opportunities

Science.gov (United States)

Collins, Mathias J.; Gray, John R.; Peppler, Marie C.; Fitzpatrick, Faith A.; Schubauer-Berigan, Joseph P.

2012-05-01

Stream morphology data, primarily consisting of channel and foodplain geometry and bed material size measurements, historically have had a wide range of applications and uses including culvert/ bridge design, rainfall- runoff modeling, food inundation mapping (e.g., U.S. Federal Emergency Management Agency food insurance studies), climate change studies, channel stability/sediment source investigations, navigation studies, habitat assessments, and landscape change research. The need for stream morphology data in the United States, and thus the quantity of data collected, has grown substantially over the past 2 decades because of the expanded interests of resource management agencies in watershed management and restoration. The quantity of stream morphology data collected has also increased because of state-of-the-art technologies capable of rapidly collecting high-resolution data over large areas with heretofore unprecedented precision. Despite increasing needs for and the expanding quantity of stream morphology data, neither common reporting standards nor a central data archive exist for storing and serving these often large and spatially complex data sets. We are proposing an open- access data exchange for archiving and disseminating stream morphology data.

Influences of recreation influence of forest and rangeland management on anadromous fish habitat in Western North America: influences of recreation.

Science.gov (United States)

Roger N. Clark; Dave R. Gibbons; Gilbert B. Pauley

1985-01-01

Public and private lands in the United States are used by millions of people for recreational activities. Many of these activities occur in or near streams and coastal areas that produce various species of anadromous fish. A major concern of fishery managers is the possible adverse effect of recreational uses on fish habitat. Conversely, the management of fish habitats...

Method and apparatus for rapid adjustment of process gas inventory in gaseous diffusion cascades

International Nuclear Information System (INIS)

1980-01-01

A method is specified for the operation of a gaseous diffusion cascade wherein electrically driven compressors circulate a process gas through a plurality of serially connected gaseous diffusion stages to establish first and second countercurrently flowing cascade streams of process gas, one of the streams being at a relatively low pressure and enriched in a component of the process gas and the other being at a higher pressure and depleted in the same, and wherein automatic control systems maintain the stage process gas pressures by positioning process gas flow control valve openings at values which are functions of the difference between reference-signal inputs to the systems, and signal inputs proportional to the process gas pressures in the gaseous diffusion stages associated with the systems, the cascade process gas inventory being altered, while the cascade is operating, by simultaneously directing into separate process-gas freezing zones a plurality of substreams derived from one of the first and second streams at different points along the lengths thereof to solidify approximately equal weights of process gas in the zone while reducing the reference-signal inputs to maintain the positions of the control valves substantially unchanged despite the removal of process gas inventory via the substreams. (author)

Walla Walla River Basin Fish Habitat Enhancement Project, 2000-2001 Annual Report.

Energy Technology Data Exchange (ETDEWEB)

Volkman, Jed; Sexton, Amy D. (Confederated Tribes of the Umatilla Indian Reservation, Pendleton, OR)

2001-01-01

In 2000, the Confederated Tribes of the Umatilla Indian Reservation (CTUIR) Fisheries Habitat Program implemented stream habitat restoration and protection efforts in the Walla Walla River Basin with funding from Bonneville Power Administration (BPA). The objective of these efforts is to protect and restore habitat critical to the recovery of weak or reintroduced populations of salmonid fish. Six projects, two on Couse Creek, two adjacent properties on Blue Creek, one on Patit Creek, and one property on the mainstem Walla Walla River were part of the exercise. Several thousand native plants as bare-root stock and cuttings were reintroduced to the sites and 18 acres of floodplain corridor was seeded with native grass seed. Pre and post-project monitoring efforts were included for all projects, incorporating methodologies from CTUIR's Draft Monitoring Plan.

Pyrethroid insecticides in urban salmon streams of the Pacific Northwest

Energy Technology Data Exchange (ETDEWEB)

Weston, D.P., E-mail: dweston@berkeley.edu [Department of Integrative Biology, University of California, 3060 Valley Life Sciences Bldg., Berkeley, CA 94720-3140 (United States); Asbell, A.M., E-mail: aasbell@berkeley.edu [Department of Integrative Biology, University of California, 3060 Valley Life Sciences Bldg., Berkeley, CA 94720-3140 (United States); Hecht, S.A., E-mail: scott.hecht@noaa.gov [NOAA Fisheries, Office of Protected Resources, 510 Desmond Drive S.E., Lacey, WA 98503 (United States); Scholz, N.L., E-mail: nathaniel.scholz@noaa.gov [NOAA Fisheries, Northwest Fisheries Science Center, 2725 Montlake Blvd. E., Seattle, WA 98112 (United States); Lydy, M.J., E-mail: mlydy@siu.edu [Fisheries and Illinois Aquaculture Center and Department of Zoology, Southern Illinois University, 171 Life Sciences II, Carbondale, IL 62901 (United States)

2011-10-15

Urban streams of the Pacific Northwest provide spawning and rearing habitat for a variety of salmon species, and food availability for developing salmon could be adversely affected by pesticide residues in these waterbodies. Sediments from Oregon and Washington streams were sampled to determine if current-use pyrethroid insecticides from residential neighborhoods were reaching aquatic habitats, and if they were at concentrations acutely toxic to sensitive invertebrates. Approximately one-third of the 35 sediment samples contained measurable pyrethroids. Bifenthrin was the pyrethroid of greatest concern with regards to aquatic life toxicity, consistent with prior studies elsewhere. Toxicity to Hyalella azteca and/or Chironomus dilutus was found in two sediment samples at standard testing temperature (23 deg. C), and in one additional sample at a more environmentally realistic temperature (13 deg. C). Given the temperature dependency of pyrethroid toxicity, low temperatures typical of northwest streams can increase the potential for toxicity above that indicated by standard testing protocols. - Highlights: > Salmon-bearing creeks can be adversely impacted by insecticides from urban runoff. > Pyrethroid insecticides were found in one-third of the creeks in Washington and Oregon. > Two creeks contained concentrations acutely lethal to sensitive invertebrates. > Bifenthrin was of greatest concern, though less than in prior studies. > Standard toxicity testing underestimates the ecological risk of pyrethroids. - Pyrethroid insecticides are present in sediments of urban creeks of Oregon and Washington, though less commonly than in studies elsewhere in the U.S.

Pyrethroid insecticides in urban salmon streams of the Pacific Northwest

International Nuclear Information System (INIS)

Weston, D.P.; Asbell, A.M.; Hecht, S.A.; Scholz, N.L.; Lydy, M.J.

2011-01-01

Urban streams of the Pacific Northwest provide spawning and rearing habitat for a variety of salmon species, and food availability for developing salmon could be adversely affected by pesticide residues in these waterbodies. Sediments from Oregon and Washington streams were sampled to determine if current-use pyrethroid insecticides from residential neighborhoods were reaching aquatic habitats, and if they were at concentrations acutely toxic to sensitive invertebrates. Approximately one-third of the 35 sediment samples contained measurable pyrethroids. Bifenthrin was the pyrethroid of greatest concern with regards to aquatic life toxicity, consistent with prior studies elsewhere. Toxicity to Hyalella azteca and/or Chironomus dilutus was found in two sediment samples at standard testing temperature (23 deg. C), and in one additional sample at a more environmentally realistic temperature (13 deg. C). Given the temperature dependency of pyrethroid toxicity, low temperatures typical of northwest streams can increase the potential for toxicity above that indicated by standard testing protocols. - Highlights: → Salmon-bearing creeks can be adversely impacted by insecticides from urban runoff. → Pyrethroid insecticides were found in one-third of the creeks in Washington and Oregon. → Two creeks contained concentrations acutely lethal to sensitive invertebrates. → Bifenthrin was of greatest concern, though less than in prior studies. → Standard toxicity testing underestimates the ecological risk of pyrethroids. - Pyrethroid insecticides are present in sediments of urban creeks of Oregon and Washington, though less commonly than in studies elsewhere in the U.S.

An Index of Biotic Integrity for shallow streams of the Hondo River basin, Yucatan Peninsula

International Nuclear Information System (INIS)

Schmitter-Soto, Juan J.; Ruiz-Cauich, Lissie E.; Herrera, Roberto L.; Gonzalez-Solis, David

2011-01-01

An Index of Biotic Integrity (IBI) is proposed, based on the fish communities and populations in streams of the Hondo River basin, Mexico-Belize. Freshwater environments in this area are threatened by exotic fishes, eutrophication, and pesticide pollution, among other problems. This IBI should allow to identify the most vulnerable sites and eventually guide rehabilitation efforts. Data on composition, structure, and function of fish communities were evaluated. Twenty-three sites in the Mexican part of the basin were explored; a stratified sample of 13 sites was used to design the IBI, and the rest were used to test and refine the index. Thirty-four candidate indicator metrics were scanned for their correlation with an index of water and habitat quality (IWHQ), as well as for the possible influence of stream width and altitude or distance to the Hondo River mainstem. Twelve variables were selected to constitute the IBI: relative abundances of Astyanax aeneus, 'Cichlasoma' urophthalmus, Poecilia mexicana, Poecilia sp. (a new species, probably endemic to the upper Hondo River basin), Xiphophorus hellerii, and X. maculatus; relative abundances of bentholimnetic, herbivore, and sensitive species; percentage of native and tolerant species; and Pielou's evenness index. Most of the sites have a low-medium quality and integrity, showing impact due to partial channelization or to suboptimal water quality, reflected in scarcity or absence of sensitive species, frequent excess of tolerant species, occasional presence of exotics, dominance of herbivores (perhaps due to proliferation of filamentous algae), or dominance of the opportunistic species P. mexicana. The streams with better water and habitat quality are those farthest away from the river mainstem, probably because of lower human population and economical production. - Research Highlights: → An Index of Biotic Integrity based on fishes is proposed for streams of the Hondo River basin. → Twelve variables were

Instream flow characterization of Upper Salmon River basin streams, central Idaho, 2005

Science.gov (United States)

Maret, Terry R.; Hortness, Jon E.; Ott, Douglas S.

2006-01-01

Anadromous fish populations in the Columbia River Basin have plummeted in the last 100 years. This severe decline led to Federal listing of Chinook salmon (Oncorhynchus tshawytscha) and steelhead trout (Oncorhynchus mykiss) stocks as endangered or threatened under the Endangered Species Act (ESA) in the 1990s. Historically, the upper Salmon River Basin (upstream of the confluence with the Pahsimeroi River) in Idaho provided migration corridors and significant habitat for these ESA-listed species, in addition to the ESA-listed bull trout (Salvelinus confluentus). Human development has modified the original streamflow conditions in many streams in the upper Salmon River Basin. Summer streamflow modifications resulting from irrigation practices, have directly affected quantity and quality of fish habitat and also have affected migration and (or) access to suitable spawning and rearing habitat for these fish. As a result of these ESA listings and Action 149 of the Federal Columbia River Power System Biological Opinion of 2000, the Bureau of Reclamation was tasked to conduct streamflow characterization studies in the upper Salmon River Basin to clearly define habitat requirements for effective species management and habitat restoration. These studies include collection of habitat and streamflow information for the Physical Habitat Simulation System (PHABSIM) model, a widely applied method to determine relations between habitat and discharge requirements for various fish species and life stages. Model simulation results can be used by resource managers to guide habitat restoration efforts by evaluating potential fish habitat and passage improvements by increasing or decreasing streamflow. In 2005, instream flow characterization studies were completed on Big Boulder, Challis, Bear, Mill, and Morgan Creeks. Continuous streamflow data were recorded upstream of all diversions on Big Boulder. Instantaneous measurements of discharge were also made at selected sites. In

Assessing Thermally Stressful Events in a Rhode Island Coldwater Fish Habitat Using the SWAT Model

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Britta Chambers

2017-09-01

Full Text Available It has become increasingly important to recognize historical water quality trends so that the future impacts of climate change may be better understood. Climate studies have suggested that inland stream temperatures and average streamflow will increase over the next century in New England, thereby putting aquatic species sustained by coldwater habitats at risk. In this study we evaluated two different approaches for modeling historical streamflow and stream temperature in a Rhode Island, USA, watershed with the Soil and Water Assessment Tool (SWAT, using (i original SWAT and (ii SWAT plus a hydroclimatological model component that considers both hydrological inputs and air temperature. Based on daily calibration results with six years of measured streamflow and four years of stream temperature data, we examined occurrences of stressful conditions for brook trout (Salvelinus fontinalis using the hydroclimatological model. SWAT with the hydroclimatological component improved modestly during calibration (NSE of 0.93, R2 of 0.95 compared to the original SWAT (NSE of 0.83, R2 of 0.93. Between 1980–2009, the number of stressful events, a moment in time where high or low flows occur simultaneously with stream temperatures exceeding 21 °C, increased by 55% and average streamflow increased by 60%. This study supports using the hydroclimatological SWAT component and provides an example method for assessing stressful conditions in southern New England’s coldwater habitats.

Habitat Effects on the Breeding Performance of Three Forest-Dwelling Hawks.

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Björklund, Heidi; Valkama, Jari; Tomppo, Erkki; Laaksonen, Toni

2015-01-01

Habitat loss causes population declines, but the mechanisms are rarely known. In the European Boreal Zone, loss of old forest due to intensive forestry is suspected to cause declines in forest-dwelling raptors by reducing their breeding performance. We studied the boreal breeding habitat and habitat-associated breeding performance of the northern goshawk (Accipiter gentilis), common buzzard (Buteo buteo) and European honey buzzard (Pernis apivorus). We combined long-term Finnish bird-of-prey data with multi-source national forest inventory data at various distances (100-4000 m) around the hawk nests. We found that breeding success of the goshawk was best explained by the habitat within a 2000-m radius around the nests; breeding was more successful with increasing proportions of old spruce forest and water, and decreasing proportions of young thinning forest. None of the habitat variables affected significantly the breeding success of the common buzzard or the honey buzzard, or the brood size of any of the species. The amount of old spruce forest decreased both around goshawk and common buzzard nests and throughout southern Finland in 1992-2010. In contrast, the area of young forest increased in southern Finland but not around hawk nests. We emphasize the importance of studying habitats at several spatial and temporal scales to determine the relevant species-specific scale and to detect environmental changes. Further effort is needed to reconcile the socioeconomic and ecological functions of forests and habitat requirements of old forest specialists.

Habitat Effects on the Breeding Performance of Three Forest-Dwelling Hawks.

Directory of Open Access Journals (Sweden)

Heidi Björklund

Full Text Available Habitat loss causes population declines, but the mechanisms are rarely known. In the European Boreal Zone, loss of old forest due to intensive forestry is suspected to cause declines in forest-dwelling raptors by reducing their breeding performance. We studied the boreal breeding habitat and habitat-associated breeding performance of the northern goshawk (Accipiter gentilis, common buzzard (Buteo buteo and European honey buzzard (Pernis apivorus. We combined long-term Finnish bird-of-prey data with multi-source national forest inventory data at various distances (100-4000 m around the hawk nests. We found that breeding success of the goshawk was best explained by the habitat within a 2000-m radius around the nests; breeding was more successful with increasing proportions of old spruce forest and water, and decreasing proportions of young thinning forest. None of the habitat variables affected significantly the breeding success of the common buzzard or the honey buzzard, or the brood size of any of the species. The amount of old spruce forest decreased both around goshawk and common buzzard nests and throughout southern Finland in 1992-2010. In contrast, the area of young forest increased in southern Finland but not around hawk nests. We emphasize the importance of studying habitats at several spatial and temporal scales to determine the relevant species-specific scale and to detect environmental changes. Further effort is needed to reconcile the socioeconomic and ecological functions of forests and habitat requirements of old forest specialists.

Presentation and analysis of a worldwide database of earthquake-induced landslide inventories

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Tanyas, Hakan; van Westen, Cees J.; Allstadt, Kate E.; Nowicki Jessee, M. Anna; Gorum, Tolga; Jibson, Randall W.; Godt, Jonathan W.; Sato, Hiroshi P.; Schmitt, Robert G.; Marc, Odin; Hovius, Niels

2017-01-01

Earthquake-induced landslide (EQIL) inventories are essential tools to extend our knowledge of the relationship between earthquakes and the landslides they can trigger. Regrettably, such inventories are difficult to generate and therefore scarce, and the available ones differ in terms of their quality and level of completeness. Moreover, access to existing EQIL inventories is currently difficult because there is no centralized database. To address these issues, we compiled EQIL inventories from around the globe based on an extensive literature study. The database contains information on 363 landslide-triggering earthquakes and includes 66 digital landslide inventories. To make these data openly available, we created a repository to host the digital inventories that we have permission to redistribute through the U.S. Geological Survey ScienceBase platform. It can grow over time as more authors contribute their inventories. We analyze the distribution of EQIL events by time period and location, more specifically breaking down the distribution by continent, country, and mountain region. Additionally, we analyze frequency distributions of EQIL characteristics, such as the approximate area affected by landslides, total number of landslides, maximum distance from fault rupture zone, and distance from epicenter when the fault plane location is unknown. For the available digital EQIL inventories, we examine the underlying characteristics of landslide size, topographic slope, roughness, local relief, distance to streams, peak ground acceleration, peak ground velocity, and Modified Mercalli Intensity. Also, we present an evaluation system to help users assess the suitability of the available inventories for different types of EQIL studies and model development.

Inventory of the pool frog, newt and gulyxne in Forsmark 2012

International Nuclear Information System (INIS)

Collinder, Per

2013-01-01

On assignment from the Swedish Nuclear Fuel and Waste Management Co (SKB), Ekologigruppen AB carried out inventories of species populations during the summer of 2012. Species included in the study are described in three separate chapters of this report. The three species were pool frog Rana lessonae, great crested newt Triturus cristatus, and fen orchid Liparis loeselii. SKB will follow up the development of the local populations. Inventory of pool frogs are already a follow-up on a study carried out in 2011. Concern for these species is due to their protection within the EU system of species and habitat protection. Construction of the planned depository for used nuclear fuel will involve redirection of groundwater, which could potentially drain these wetlands. The three species pool frog, great crested newt and fen orchid are inventoried by well-documented procedures, which will allow repletion of the study at the same locals and according to the same methods during consequent years. The inventories are not complete in the sense that they would give number of individuals in a local population. Rather, the result should be regarded as an index for comparison and monitoring

Rehabilitation of an Incised Stream Using Plant Materials: the Dominance of Geomorphic Processes

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F. Douglas. Shields, Jr.

2008-12-01

Full Text Available The restoration of potentially species-rich stream ecosystems in physically unstable environments is challenging, and few attempts have been evaluated scientifically. Restoration approaches that involve living and dead native vegetation are attractive economically and from an ecological standpoint. A 2-km reach of an incised, sand-bed stream in northern Mississippi was treated with large wood structures and willow plantings to trigger responses that would result in increasing similarity with a lightly degraded reference stream. Experimental approaches for stream bank and gully stabilization were also examined. Although the project was initially successful in producing improved aquatic habitat, after 4 yr it had failed to effectively address issues related to flashy watershed hydrology and physical instability manifest by erosion and sedimentation. The success of ecosystem rehabilitation was thus governed by landscape-scale hydrological and geomorphological processes.

Using otolith chemical and structural analysis to investigate reservoir habitat use by juvenile Chinook salmon Oncorhynchus tshawytscha.

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Bourret, S L; Kennedy, B P; Caudill, C C; Chittaro, P M

2014-11-01

Isotopic composition of (87) Sr:(86) Sr and natural elemental tracers (Sr, Ba, Mg, Mn and Ca) were quantified from otoliths in juvenile and adult Chinook salmon Oncorhynchus tshawytscha to assess the ability of otolith microchemistry and microstructure to reconstruct juvenile O. tshawytscha rearing habitat and growth. Daily increments were measured to assess relative growth between natal rearing habitats. Otolith microchemistry was able to resolve juvenile habitat use between reservoir and natal tributary rearing habitats (within headwater basins), but not among catchments. Results suggest that 90% (n = 18) of sampled non-hatchery adults returning to the Middle Fork Willamette River were reared in a reservoir and 10% (n = 2) in natal tributary habitat upstream from the reservoir. Juveniles collected in reservoirs had higher growth rates than juveniles reared in natal streams. The results demonstrate the utility of otolith microchemistry and microstructure to distinguish among rearing habitats, including habitats in highly altered systems. © 2014 The Fisheries Society of the British Isles.

Managing harvest and habitat as integrated components

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Osnas, Erik; Runge, Michael C.; Mattsson, Brady J.; Austin, Jane E.; Boomer, G. S.; Clark, R. G.; Devers, P.; Eadie, J. M.; Lonsdorf, E. V.; Tavernia, Brian G.

2014-01-01

In 2007, several important initiatives in the North American waterfowl management community called for an integrated approach to habitat and harvest management. The essence of the call for integration is that harvest and habitat management affect the same resources, yet exist as separate endeavours with very different regulatory contexts. A common modelling framework could help these management streams to better understand their mutual effects. Particularly, how does successful habitat management increase harvest potential? Also, how do regional habitat programmes and large-scale harvest strategies affect continental population sizes (a metric used to express habitat goals)? In the ensuing five years, several projects took on different aspects of these challenges. While all of these projects are still on-going, and are not yet sufficiently developed to produce guidance for management decisions, they have been influential in expanding the dialogue and producing some important emerging lessons. The first lesson has been that one of the more difficult aspects of integration is not the integration across decision contexts, but the integration across spatial and temporal scales. Habitat management occurs at local and regional scales. Harvest management decisions are made at a continental scale. How do these actions, taken at different scales, combine to influence waterfowl population dynamics at all scales? The second lesson has been that consideration of the interface of habitat and harvest management can generate important insights into the objectives underlying the decision context. Often the objectives are very complex and trade-off against one another. The third lesson follows from the second – if an understanding of the fundamental objectives is paramount, there is no escaping the need for a better understanding of human dimensions, specifically the desires of hunters and nonhunters and the role they play in conservation. In the end, the compelling question is

Recovery of Three Arctic Stream Reaches From Experimental Nutrient Enrichment.

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Green, A. C.; Benstead, J. P.; Deegan, L. A.; Peterson, B. J.; Bowden, W. B.; Huryn, A. D.; Slavik, K.; Hershey, A. E.

2005-05-01

We examined multi-year patterns in community recovery from experimental low-concentration nutrient (N+P and P only) enrichment in three reaches of two Arctic tundra streams (Kuparuk River and Oksrukuyik Creek) on the North Slope of Alaska (USA). Rates of recovery varied among community components and depended on duration of enrichment (2 to 13 consecutive growing seasons). Biomass and C:P ratio of epilithic algae returned to reference levels rapidly (within 2 years), regardless of enrichment duration. Bryophyte cover, which increased greatly after long-term enrichment (>8 years), recovered to reference levels only after 7 years, when a storm scoured most remnant moss in the recovering reach. Persistence of bryophytes slowed recovery rates of insect taxa that had either been positively (e.g., Ephemerella, most chironomid taxa) or negatively (e.g., Orthocladius rivulorum) affected by this shift in dominant primary producer and its consequence for benthic habitat. Growth of Arctic grayling (adults and young-of-year), the top predator, returned to reference rates within two years. Recovery of these Arctic stream ecosystems from nutrient enrichment was consequently controlled largely by interactions between duration of enrichment and physical disturbance, mediated through physical habitat shifts caused by bryophytes.

Assessment of stream quality using biological indices at selected sites in the Schuylkill River basin, Chester County, Pennsylvania, 1981-97

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Reif, Andrew G.

2002-01-01

IntroductionIn 1970, the Chester County Water Resources Authority (Pennsylvania) and the U.S. Geological Survey (USGS) established a long-term water-quality network with the goal of assessing the quality of streams in the county and understanding stream changes in response to urbanization using benthic-macroinvertebrate data. This database represents one of the longest continuous water-quality data sets in the country. Benthic macroinvertebrates are aquatic insects, such as mayflies, caddisflies, riffle beetles, and midges, and other invertebrates that live on the stream bottom. Benthic macroinvertebrates are useful in evaluating stream quality because their habitat preferences and low motility cause them to be affected directly by substances that enter the aquatic system. By evaluating the diversity and community structure of benthic-macroinvertebrate populations, a determination of stream quality can be made.Between 1981 and 1997, the network consisted of 43 sites in 5 major basins in Chester County—Delaware, Schuylkill, Brandywine, Big Elk and Octoraro, and Red and White Clay. Benthic-macroinvertebrate, water-chemistry, and habitat data were collected each year in October or November during base-flow conditions. Using these data, Reif evaluated the overall water-quality condition of Chester County streams. This Fact Sheet summarizes the key findings from Reif for streams in the Schuylkill River Basin. These streams include Pigeon Creek (site 10), Stony Run (site 6), French Creek (sites 12-16), Pickering Creek (sites 1-5), Little Valley Creek (site 49), and Valley Creek (site 50). This summary includes an analysis of stream conditions based on benthic-macroinvertebrate samples and an analysis of trends in stream conditions for the 17-year study period.

Groundwater declines are linked to changes in Great Plains stream fish assemblages.

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Perkin, Joshuah S; Gido, Keith B; Falke, Jeffrey A; Fausch, Kurt D; Crockett, Harry; Johnson, Eric R; Sanderson, John

2017-07-11

Groundwater pumping for agriculture is a major driver causing declines of global freshwater ecosystems, yet the ecological consequences for stream fish assemblages are rarely quantified. We combined retrospective (1950-2010) and prospective (2011-2060) modeling approaches within a multiscale framework to predict change in Great Plains stream fish assemblages associated with groundwater pumping from the United States High Plains Aquifer. We modeled the relationship between the length of stream receiving water from the High Plains Aquifer and the occurrence of fishes characteristic of small and large streams in the western Great Plains at a regional scale and for six subwatersheds nested within the region. Water development at the regional scale was associated with construction of 154 barriers that fragment stream habitats, increased depth to groundwater and loss of 558 km of stream, and transformation of fish assemblage structure from dominance by large-stream to small-stream fishes. Scaling down to subwatersheds revealed consistent transformations in fish assemblage structure among western subwatersheds with increasing depths to groundwater. Although transformations occurred in the absence of barriers, barriers along mainstem rivers isolate depauperate western fish assemblages from relatively intact eastern fish assemblages. Projections to 2060 indicate loss of an additional 286 km of stream across the region, as well as continued replacement of large-stream fishes by small-stream fishes where groundwater pumping has increased depth to groundwater. Our work illustrates the shrinking of streams and homogenization of Great Plains stream fish assemblages related to groundwater pumping, and we predict similar transformations worldwide where local and regional aquifer depletions occur.

First records of Rhicnoda natatrix and Rhicnoda rugosa (Blattodea: Blaberidae from Nepal and India (Maharashtra with notes on habitat quality

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H. Nesemann

2010-01-01

Full Text Available Two species of cockroaches were collected from aquatic habitats of undisturbed natural forest streams in Nepal and India (Maharashtra: Rhicnoda natatrix and Rhicnoda rugosa. Nymphs and adults are depicted and field observations of microhabitat and behavior described. Taxa lists of accompanying macroinvertebrate fauna are given, and water quality class is calculated using three biotic scoring systems. R. natatrix is a true aquatic species with amphibious lifestyle in the eulittoral of springs (Crenon and streams (Rhithron of excellent and good water quality classes I and II. R. rugosa is a predominantly terrestrial species that also colonizes the banks of water bodies and appears in between aquatic fauna. These species cannot be classified using the traditional habitat system.

Survey of beaver-related restoration practices in rangeland streams of the western USA

Science.gov (United States)

David S. Pilliod; Ashley T. Rohde; Susan Charnley; Rachael R. Davee; Jason B. Dunham; Hannah Gosnell; Gordon E. Grant; Mark B. Hausner; Justin L. Huntington; Caroline Nash

2018-01-01

Poor condition of many streams and concerns about future droughts in the arid and semi-arid western USA have motivated novel restoration strategies aimed at accelerating recovery and increasing water resources. Translocation of beavers into formerly occupied habitats, restoration activities encouraging beaver recolonization, and instream structures mimicking the...

Using Streamflow and Stream Temperature to Assess the Potential Responses of Freshwater Fish to Climate Change

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VanCompernolle, M.; Ficklin, D. L.; Knouft, J.

2017-12-01

Streamflow and stream temperature are key variables influencing growth, reproduction, and mortality of freshwater fish. Climate-induced changes in these variables are expected to alter the structure and function of aquatic ecosystems. Using Maxent, a species distribution model (SDM) based on the principal of maximum entropy, we predicted potential distributional responses of 100 fish species in the Mobile River Basin (MRB) to changes in climate based on contemporary and future streamflow and stream temperature estimates. Geologic, topographic, and landcover data were also included in each SDM to determine the contribution of these physical variables in defining areas of suitable habitat for each species. Using an ensemble of Global Climate Model (GCM) projections under a high emissions scenario, predicted distributions for each species across the MRB were produced for both a historical time period, 1975-1994, and a future time period, 2060-2079, and changes in total area and the percent change in historical suitable habitat for each species were calculated. Results indicate that flow (28%), temperature (29%), and geology (29%), on average, contribute evenly to determining areas of suitable habitat for fish species in the MRB, with landcover and slope playing more limited roles. Temperature contributed slightly more predictive ability to SDMs (31%) for the 77 species experiencing overall declines in areas of suitable habitat, but only 21% for the 23 species gaining habitat across all GCMs. Species are expected to lose between 15-24% of their historical suitable habitat, with threatened and endangered species losing 22-30% and those endemic to the MRB losing 19-28%. Sculpins (Cottidae) are expected to lose the largest amount of historical habitat (up to 84%), while pygmy sunfish (Elassomatidae) are expected to lose less than 1% of historical habitat. Understanding which species may be at risk of habitat loss under future projections of climate change can help

Ecoregions and stream morphology in eastern Oklahoma

Science.gov (United States)

Splinter, D.K.; Dauwalter, D.C.; Marston, R.A.; Fisher, W.L.

2010-01-01

Broad-scale variables (i.e., geology, topography, climate, land use, vegetation, and soils) influence channel morphology. How and to what extent the longitudinal pattern of channel morphology is influenced by broad-scale variables is important to fluvial geomorphologists and stream ecologists. In the last couple of decades, there has been an increase in the amount of interdisciplinary research between fluvial geomorphologists and stream ecologists. In a historical context, fluvial geomorphologists are more apt to use physiographic regions to distinguish broad-scale variables, while stream ecologists are more apt to use the concept of an ecosystem to address the broad-scale variables that influence stream habitat. For this reason, we designed a study using ecoregions, which uses physical and biological variables to understand how landscapes influence channel processes. Ecoregions are delineated by similarities in geology, climate, soils, land use, and potential natural vegetation. In the fluvial system, stream form and function are dictated by processes observed throughout the fluvial hierarchy. Recognizing that stream form and function should differ by ecoregion, a study was designed to evaluate how the characteristics of stream channels differed longitudinally among three ecoregions in eastern Oklahoma, USA: Boston Mountains, Ozark Highlands, and Ouachita Mountains. Channel morphology of 149 stream reaches was surveyed in 1st- through 4th-order streams, and effects of drainage area and ecoregion on channel morphology was evaluated using multiple regressions. Differences existed (?????0.05) among ecoregions for particle size, bankfull width, and width/depth ratio. No differences existed among ecoregions for gradient or sinuosity. Particle size was smallest in the Ozark Highlands and largest in the Ouachita Mountains. Bankfull width was larger in the Ozark Highlands than in the Boston Mountains and Ouachita Mountains in larger streams. Width/depth ratios of the

Does resolution of flow field observation influence apparent habitat use and energy expenditure in juvenile coho salmon?

Science.gov (United States)

Tullos, Desiree D.; Walter, Cara; Dunham, Jason B.

2016-01-01