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Sample records for stalk rot complex

  1. Organics and mineral fertilizers and biological control on the incidence of stalk rot and corn yield

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    Elena Blume

    2014-06-01

    Full Text Available The expansion of area under maize (Zea mays L. and the use of no tillage have favored the incidence of stalk rot on this crop. The study aimed to evaluate the organic fertilizers and the treatment of corn seeds with Trichoderma spp. on the production of dry matter (DM of shoot, incidence of stalk rot and corn yield. The experiment consisted in a factorial with split-plot in strips, on the randomized block design with four replicates, and the fertilization treatments (pig slurry; swine deep bedding; cattle slurry; mineral fertilizer; control treatment were applied to the plots and the seeds treatment (with and without Trichoderma spp. in the subplots. At the flowering stage, three corn plants per subplot were collected for the assessment of DM production. At physiological maturity stage, the incidence of stalk rot was assessed, and the ears of corn harvested for productivity assessment. The organic and mineral fertilizers increased the production of DM and productivity of corn. Trichoderma spp. increased the production of DM of corn, but had no reflection on productivity. The incidence of stalk rot in corn was higher in treatments with organic and mineral fertilization. Organic fertilizers increase dry matter production of shoot and corn yield, and Trichoderma spp. provides an increase in dry matter production of shoot.

  2. Identification of sources of resistance to anthracnose stalk rot in maize

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    Alessandro Nicoli

    Full Text Available ABSTRACT: Adoption of resistant cultivars is the primary measure used to control anthracnose stalk rot. The goal of this study was to identify maize-resistant genotypes to anthracnose stalk rot, which are similar to the hybrid 2B710. Experiments were performed at Embrapa Maize and Sorghum experimental fields in Brazil. The first experimental trial evaluated 234 maize lines as well as two commercials hybrids, BRS1010 (susceptible and 2B710 (resistant. Artificial inoculations were performed with a strain at the blister (R2 phase, and evaluation of disease severity was performed after 30 days. The second experimental trial evaluated 48 maize lines and hybrids, inoculated with two Colletotrichum graminicola strains. In the first trial, eight resistance groups were formed, and the last lines were more resistant, as was the hybrid 2B710, with values between 11.50% and 23.0% of severity. In the second trial, there was an interaction between the two factors, lines and isolates, and the lines often showed the same reaction features as those obtained in the first trial. However, the disease severity was higher for most lines, even when using other isolates. These lines with effective levels of resistance could be used in future studies of inheritance, in programs to develop hybrids, and to identify molecular markers associated with resistance to anthracnose stalk rot in maize.

  3. Interaction between N-fertilizer and water availability on borer-rot complex in sugarcane

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    Luiz Eduardo da Rocha Pannuti

    2015-03-01

    Full Text Available This study aimed to evaluate the effects of nitrogen availability in fertigation and rainfed management, as well as their interactions with the incidence of and damage caused by D. saccharalis and red rot in sugarcane. The experiment consisted of four treatments (0 and 150 kg ha–1 of N-fertilizer with irrigation; 0 and 150 kg ha–1 of N-fertilizer in rainfed management in a randomized complete block design with four replications. The evaluated parameters were the number of holes and internodes with red rot per meter of cultivation, stalk yield and sugar content. In the laboratory (T = 25 ± 2 °C; R.H. = 70 ± 10%: 12:12-L:D, we evaluated the attractiveness and consumption of fragments of stalks from the different treatments for fourth instar larvae through choice and no-choice tests in a randomized complete block design with ten replications. Nitrogen fertilization via irrigation has favorable effects on borer-rot complex and leads to higher gains in stalk and sugar yields when compared to rainfed management. The increments of stalk and sugar yields due to nitrogen fertilization compensates for the increase in borer-rot complex infestation. In laboratory tests, D. saccharalis larvae were similarly attracted to all treatments regardless of the doses of N-fertilizer or the water regimes evaluated. However, fragments of sugarcane stalks produced with nitrogen fertilization were consumed more by D. saccharalis in both water regimes.

  4. Registration of an oilseed sunflower germplasm line HA-BSR1 highly tolerant to Sclerotinia basal stalk rot

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    Basal stalk rot (BSR) caused by Sclerotinia sclerotiorum (Lib.) de Bary is a devastating disease that causes a significant damage to worldwide sunflower (Helianthus annuus L.) production by reducing seed yield and quality. The objective of this research was to develop highly BSR tolerant sunflower g...

  5. Occurrence of Zearalenols (Diastereomeric Mixture) in Corn Stalk Rot and Their Production by Associated Fusarium Species

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    Bottalico, Antonio; Visconti, Angelo; Logrieco, Antonio; Solfrizzo, Michele; Mirocha, Chester J.

    1985-01-01

    Zearalenol was extracted from Fusarium-infected stems of corn from southern Italy. The toxin, which appeared as a single compound in various thin-layer chromatography systems, was resolved by high-pressure liquid chromatography into two components. A gas chromatography-mass spectrometry examination of a purified fraction confirmed the natural occurrence of zearalenol as a diastereomeric mixture and led to the identification of alpha (56 ng/g) and beta (27 ng/g) isomers. Among nine Fusarium species found associated with stalk rot in corn, only Fusarium culmorum (F. roseum `Culmorum') and F. equiseti (F. roseum `Gibbosum') produced zearalenol and always produced it in a diastereomeric mixture of alpha and beta isomers. PMID:16346748

  6. Sunflower inbred lines screening for tolerance to white rot on stalk

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    Dedić Boško

    2011-01-01

    Full Text Available Seventy sunflower (Helianthus annuus L inbred lines were screened for tolerance to white rot on stalk. Plants were inoculated at the budding stage with 4-day old Sclerotinia mycelium grown on PDA medium. Mycelium was placed on the leaf top and covered with tin foil, and the leaf was put into transparent nylon bag in order to maintain high humidity. Spot length on leaf was measured and plant tolerance was determined at the full flowering stage. Obtained results were analyzed by analysis of variance. Tested lines showed significant variability in response to disease. Eleven lines had lesion length less than 50% compared to susceptible control, so they could be considered tolerant and potentially interesting for breeding program.

  7. Biological Control of Fusarium Stalk Rot of Maize Using Bacillus spp

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    Joon-Hee Han

    2015-12-01

    Full Text Available Maize (Zea mays L. is an economically important crop in worldwide. While the consumption of the maize is steadily increasing, the yield is decreasing due to continuous mono-cultivation and infection of soil-borne fungal pathogens such as Fusarium species. Recently, stalk rot disease in maize, caused by F. subglutinans and F. temperatum has been reported in Korea. In this study, we isolated bacterial isolates in rhizosphere soil of maize and subsequently tested for antagonistic activities against F. subglutinans and F. temperatum. A total of 1,357 bacterial strains were isolated from rhizosphere. Among them three bacterial isolates (GC02, GC07, GC08 were selected, based on antagonistic effects against Fusarium species. The isolates GC02 and GC07 were most efficient in inhibiting the mycelium growth of the pathogens. The three isolates GC02, GC07 and GC08 were identified as Bacillus methylotrophicus, B. amyloliquefaciens and B. thuringiensis using 16S rRNA sequence analysis, respectively. GC02 and GC07 bacterial suspensions were able to suppress over 80% conidial germination of the pathogens. GC02, GC07 and GC08 were capable of producing large quantities of protease enzymes, whereas the isolates GC07 and GC08 produced cellulase enzymes. The isolates GC02 and GC07 were more efficient in phosphate solubilization and siderophore production than GC08. Analysis of disease suppression revealed that GC07 was most effective in suppressing the disease development of stalk rot. It was also found that B. methylotrophicus GC02 and B. amyloliquefaciens GC07 have an ability to inhibit the growth of other plant pathogenic fungi. This study indicated B. methylotrophicus GC02 and B. amyloliquefaciens GC07 has potential for being used for the development of a biological control agent.

  8. Grape stalks as substrate for white rot fungi, lignocellulolytic enzyme production and dye decolorization.

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    Levin, Laura; Diorio, Luis; Grassi, Emanuel; Forchiassin, Flavia

    2012-01-01

    The aim of this work was to evaluate the potential of grape stalks, an agroindustrial waste, for growth and lignocellulolytic enzyme production via solid-state fermentation, using the following three white rot fungi: Trametes trogii, Stereum hirsutum and Coriolus antarcticus. The decolorization of several dyes by the above mentioned cultures was also investigated. Similar values of dry weight loss of the substrate were measured after 60 days (33-43 %). C. antarcticus produced the highest laccase and Mn-peroxidase activities (33.0 and 1.6 U/g dry solid). The maximum endoglucanase production was measured in S. hirsutum cultures (10.4 U/g), while the endoxylanase peak corresponded to T. trogii (14.6 U/g). The C. antarcticus/grape stalk system seems potentially competitive in bioremediation of textile processing effluents, attaining percentages of decolorization of 93, 86, 82, 82, 77, and 58% for indigo carmine, malachite green, azure B, remazol brilliant blue R, crystal violet and xylidine, respectively, in 5 h.

  9. Rhamnolipid Biosurfactant against Fusarium verticillioides to Control Stalk and Ear Rot Disease of Maize

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    Siddhartha Narayan Borah

    2016-09-01

    Full Text Available Antifungal activity of rhamnolipids (RLs has been widely studied against many plant pathogenic fungi, but not against Fusarium verticillioides, a major pathogen of maize (Zea mays L.. F. verticillioides causes stalk and ear rot of maize or asymptomatically colonizes the plant and ears resulting in moderate to heavy crop loss throughout the world. F. verticillioides produces fumonisin mycotoxins, reported carcinogens, which makes the contaminated ears unsuitable for consumption. In this study, the RL produced using glucose as sole carbon source was characterized by FTIR and LCMS analyses and its antifungal activity against F. verticillioides was evaluated in vitro on maize stalks and seeds. Further, the effect of RL on the mycelia of F. verticillioides was investigated by scanning electron microscopy which revealed visible damage to the mycelial structure as compared to control samples. In planta, treatment of maize seeds with a RL concentration of 50 mg l-1 resulted in improved biomass and fruiting compared to those of healthy control plants and complete suppression of characteristic disease symptoms and colonization of maize by F. verticillioides. The study highlights the potential of RLs to be used for an effective biocontrol strategy against colonization of maize plant by F. verticillioides.

  10. Combined Effects of Soil Biotic and Abiotic Factors, Influenced by Sewage Sludge Incorporation, on the Incidence of Corn Stalk Rot.

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    Ghini, Raquel; Fortes, Nara Lúcia Perondi; Navas-Cortés, Juan A; Silva, Carlos Alberto; Bettiol, Wagner

    2016-01-01

    The objectives of this study were to evaluate the combined effects of soil biotic and abiotic factors on the incidence of Fusarium corn stalk rot, during four annual incorporations of two types of sewage sludge into soil in a 5-years field assay under tropical conditions and to predict the effects of these variables on the disease. For each type of sewage sludge, the following treatments were included: control with mineral fertilization recommended for corn; control without fertilization; sewage sludge based on the nitrogen concentration that provided the same amount of nitrogen as in the mineral fertilizer treatment; and sewage sludge that provided two, four and eight times the nitrogen concentration recommended for corn. Increasing dosages of both types of sewage sludge incorporated into soil resulted in increased corn stalk rot incidence, being negatively correlated with corn yield. A global analysis highlighted the effect of the year of the experiment, followed by the sewage sludge dosages. The type of sewage sludge did not affect the disease incidence. A multiple logistic model using a stepwise procedure was fitted based on the selection of a model that included the three explanatory parameters for disease incidence: electrical conductivity, magnesium and Fusarium population. In the selected model, the probability of higher disease incidence increased with an increase of these three explanatory parameters. When the explanatory parameters were compared, electrical conductivity presented a dominant effect and was the main variable to predict the probability distribution curves of Fusarium corn stalk rot, after sewage sludge application into the soil.

  11. Combined Effects of Soil Biotic and Abiotic Factors, Influenced by Sewage Sludge Incorporation, on the Incidence of Corn Stalk Rot.

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    Raquel Ghini

    Full Text Available The objectives of this study were to evaluate the combined effects of soil biotic and abiotic factors on the incidence of Fusarium corn stalk rot, during four annual incorporations of two types of sewage sludge into soil in a 5-years field assay under tropical conditions and to predict the effects of these variables on the disease. For each type of sewage sludge, the following treatments were included: control with mineral fertilization recommended for corn; control without fertilization; sewage sludge based on the nitrogen concentration that provided the same amount of nitrogen as in the mineral fertilizer treatment; and sewage sludge that provided two, four and eight times the nitrogen concentration recommended for corn. Increasing dosages of both types of sewage sludge incorporated into soil resulted in increased corn stalk rot incidence, being negatively correlated with corn yield. A global analysis highlighted the effect of the year of the experiment, followed by the sewage sludge dosages. The type of sewage sludge did not affect the disease incidence. A multiple logistic model using a stepwise procedure was fitted based on the selection of a model that included the three explanatory parameters for disease incidence: electrical conductivity, magnesium and Fusarium population. In the selected model, the probability of higher disease incidence increased with an increase of these three explanatory parameters. When the explanatory parameters were compared, electrical conductivity presented a dominant effect and was the main variable to predict the probability distribution curves of Fusarium corn stalk rot, after sewage sludge application into the soil.

  12. Biodegradation of lignin and nicotine with white rot fungi for the delignification and detoxification of tobacco stalk.

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    Su, Yulong; Xian, He; Shi, Sujuan; Zhang, Chengsheng; Manik, S M Nuruzzaman; Mao, Jingjing; Zhang, Ge; Liao, Weihong; Wang, Qian; Liu, Haobao

    2016-11-21

    identified with GC-MS, besides the chemicals produced in the degradation of lignin and nicotine, some small molecular valuable chemicals and fatty acid were also detected. Our study developed a new method for the degradation and detoxification of tobacco stalk by fermentation with white rot fungi Phanerochaete chrysosporium and Trametes hirsute. The different oxidative enzymes and chemical products detected during the degradation indicated a possible pathway for the utilization of tobacco stalk.

  13. Candidate gene association mapping of Sclerotinia stalk rot resistance in sunflower (Helianthus annuus L.) uncovers the importance of COI1 homologs.

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    Talukder, Zahirul I; Hulke, Brent S; Qi, Lili; Scheffler, Brian E; Pegadaraju, Venkatramana; McPhee, Kevin; Gulya, Thomas J

    2014-01-01

    Functional markers for Sclerotinia basal stalk rot resistance in sunflower were obtained using gene-level information from the model species Arabidopsis thaliana. Sclerotinia stalk rot, caused by Sclerotinia sclerotiorum, is one of the most destructive diseases of sunflower (Helianthus annuus L.) worldwide. Markers for genes controlling resistance to S. sclerotiorum will enable efficient marker-assisted selection (MAS). We sequenced eight candidate genes homologous to Arabidopsis thaliana defense genes known to be associated with Sclerotinia disease resistance in a sunflower association mapping population evaluated for Sclerotinia stalk rot resistance. The total candidate gene sequence regions covered a concatenated length of 3,791 bp per individual. A total of 187 polymorphic sites were detected for all candidate gene sequences, 149 of which were single nucleotide polymorphisms (SNPs) and 38 were insertions/deletions. Eight SNPs in the coding regions led to changes in amino acid codons. Linkage disequilibrium decay throughout the candidate gene regions declined on average to an r (2) = 0.2 for genetic intervals of 120 bp, but extended up to 350 bp with r (2) = 0.1. A general linear model with modification to account for population structure was found the best fitting model for this population and was used for association mapping. Both HaCOI1-1 and HaCOI1-2 were found to be strongly associated with Sclerotinia stalk rot resistance and explained 7.4 % of phenotypic variation in this population. These SNP markers associated with Sclerotinia stalk rot resistance can potentially be applied to the selection of favorable genotypes, which will significantly improve the efficiency of MAS during the development of stalk rot resistant cultivars.

  14. [Effects of microbial pretreatment of kenaf stalk by the white-rot fungus Pleurotus sajor-caju on bioconversion of fuel ethanol production].

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    Ruan, Qicheng; Qi, Jianmin; Hu, Kaihui; Fang, Pingping; Lin, Haihong; Xu, Jiantang; Tao, Aifen; Lin, Guolong; Yi, Lifu

    2011-10-01

    Kenaf stalk was pretreated by the white-rot fungus Pleurotus sajor-caju incubated in solid-state kenaf stalk cultivation medium. Delignification and subsequent enzymatic saccharification and fermentation of kenaf stalk were investigated in order to evaluate effects of microbial pretreatment on bioconversion of kenaf lignocellulose to fuel ethanol production. The highest delignification rate of 50.20% was obtained after 25-35 days cultivation by P. sajor-caju, which could improve subsequent enzymatic hydrolysis efficiency of kenaf cellulose. And the saccharification rate of pretreated kenaf stalk reached 69.33 to 78.64%, 4.5-5.1 times higher than the control. Simultaneous saccharification and fermentation (SSF) with microbial-pretreatment kenaf stalk as substrate was performed. The highest overall ethanol yield of 68.31% with 18.35 to 18.90 mg/mL was achieved after 72 h of SSF.

  15. Genotyping-by-sequencing uncovers the introgression alien segments associated with Sclerotinia basal stalk rot resistance from wild species—I. Helianthus argophyllus and H. petiolaris

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    Basal stalk rot (BSR), caused by Sclerotinia Sclerotiorum, is a devastating disease in sunflower worldwide. The progress of breeding for Sclerotinia BSR resistance has been hampered due to the lack of effective sources of resistance for cultivated sunflower. Our objective was to transfer BSR resista...

  16. A transposon-directed epigenetic change in ZmCCT underlies quantitative resistance to Gibberella stalk rot in maize.

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    Wang, Chao; Yang, Qin; Wang, Weixiang; Li, Yipu; Guo, Yanling; Zhang, Dongfeng; Ma, Xuena; Song, Wei; Zhao, Jiuran; Xu, Mingliang

    2017-09-01

    A major resistance quantitative trait locus, qRfg1, significantly enhances maize resistance to Gibberella stalk rot, a devastating disease caused by Fusarium graminearum. However, the underlying molecular mechanism remains unknown. We adopted a map-based cloning approach to identify the resistance gene at qRfg1 and examined the dynamic epigenetic changes during qRfg1-mediated maize resistance to the disease. A CCT domain-containing gene, ZmCCT, is the causal gene at the qRfg1 locus and a polymorphic CACTA-like transposable element (TE1) c. 2.4 kb upstream of ZmCCT is the genetic determinant of allelic variation. The non-TE1 ZmCCT allele is in a poised state, with predictive bivalent chromatin enriched for both repressive (H3K27me3/H3K9me3) and active (H3K4me3) histone marks. Upon pathogen challenge, this non-TE1 ZmCCT allele was promptly induced by a rapid yet transient reduction in H3K27me3/H3K9me3 and a progressive decrease in H3K4me3, leading to disease resistance. However, TE1 insertion in ZmCCT caused selective depletion of H3K4me3 and enrichment of methylated GC to suppress the pathogen-induced ZmCCT expression, resulting in disease susceptibility. Moreover, ZmCCT-mediated resistance to Gibberella stalk rot is not affected by photoperiod sensitivity. This chromatin-based regulatory mechanism enables ZmCCT to be more precise and timely in defense against F. graminearum infection. © 2017 The Authors. New Phytologist © 2017 New Phytologist Trust.

  17. Cellular Tracking and Gene Profiling of Fusarium graminearum during Maize Stalk Rot Disease Development Elucidates Its Strategies in Confronting Phosphorus Limitation in the Host Apoplast.

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    Yan Zhang

    2016-03-01

    Full Text Available The ascomycete fungus Fusarium graminearum causes stalk rot in maize. We tracked this pathogen's growth in wound-inoculated maize stalks using a fluorescence-labeled fungal isolate and observed that invasive hyphae grew intercellularly up to 24 h post inoculation, grew intra- and inter-cellularly between 36-48 h, and fully occupied invaded cells after 72 h. Using laser microdissection and microarray analysis, we profiled changes in global gene expression during pathogen growth inside pith tissues of maize stalk from 12 h to six days after inoculation and documented transcriptomic patterns that provide further insights into the infection process. Expression changes in transcripts encoding various plant cell wall degrading enzymes appeared to correlate with inter- and intracellular hyphal growth. Genes associated with 36 secondary metabolite biosynthesis clusters were expressed. Expression of several F. graminearum genes potentially involved in mobilization of the storage lipid triacylglycerol and phosphorus-free lipid biosynthesis were induced during early infection time points, and deletion of these genes caused reduction of virulence in maize stalk. Furthermore, we demonstrated that the F. graminearum betaine lipid synthase 1 (BTA1 gene was necessary and sufficient for production of phosphorus-free membrane lipids, and that deletion of BTA1 interfered with F. graminearum's ability to advance intercellularly. We conclude that F. graminearum produces phosphorus-free membrane lipids to adapt to a phosphate-limited extracellular microenvironment during early stages of its invasion of maize stalk.

  18. Prenatal diagnosis of body stalk complex: A rare entity and review of literature

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    Keerthi Kocherla

    2015-01-01

    Full Text Available Body stalk anomalies are a group of massively disfiguring abdominal wall defects in which the abdominal organs lie outside of the abdominal cavity in a sac of amnioperitoneum with absence of or very small umbilical cord. Various hypotheses proposed to explain the pathogenesis of limb body wall complex include early amnion disruptions, embryonic dysplasia, and vascular disruption in early pregnancy. Body stalk anomaly is an accepted fatal anomaly and, hence, its early diagnosis aids in proper management of the patient.

  19. DIALLEL ANALYSIS OF RESISTANCE TO BACTERIAL STALK ROT (Pectobacterium chrysanthemi pv. zeae Burk., McFad. and Dim. IN CORN (Zea mays L.

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    Nuning A. Subekti

    2016-10-01

    Full Text Available One of the major disease problems affecting maize farming in the Philippines is bacterial stalk rot (BSR caused by Pectobacterium chrysanthemi pv. zeae Burk., McFad. and Dim., which is formerly known as Erwinia chrysanthemi. The annual loss due to BSR is estimated at PhP. 20 million equivalent to Rp3.5 billion. At present, there is no effective control method against BSR and, therefore, varietal improvement through breeding resistant germplasms is needed. The present study aimed to determine the combining ability and the extent of additive and non-additive genetic effects in corn inbred lines with a range of reaction to BSR. Four resistant lines (S3YB 137-1-1-B, TUPI (S3 5-1-B, TUPI (S3 15-2-B, and 97-835 and two susceptible lines (CML 295 and 97-733 were used as genetic materials. Generation of test entries and evaluation of disease resistance were conducted at the experimental farm station of University of the Philippines Los Banos and Institute of Plant Breeding Los Banos, respectively, during 2002 to 2003 wet seasons. Griffing’s diallel mating system Model 1, Method 1 was followed in generating the test entries to make a total of 36 entries (six selfed parental lines and 15 each of F1 crosses and their reciprocalcrosses. The entries were then evaluated for disease resistance in a yield trial following a randomized complete block design (RCBD with two replications. Results of diallel analysisshowed two lines, S3YB 137-1-1-B and TUPI (S3 5-1-B, exhibited the best general combining ability (GCA for resistance to BSR, while the crosses S3YB 137-1-1-B x TUPI (S3 5-1-B and TUPI (S3 5-1-B x 97-835 performed the best specific combining ability (SCA for the resistance. GCA effect was greater than that of SCA. This indicated that additive gene effects were found to be more important than non-additive gene effects in the expression of resistance to BSR in the six corn lines used. Therefore, breeding programs towards

  20. Cylindrocarpon root rot: multi-gene analysis reveals novel species within the Ilyonectria radicicola species complex

    NARCIS (Netherlands)

    Cabral, A.; Groenewald, J.Z.; Rego, C.; Oliveira, H.; Crous, P.W.

    2012-01-01

    Ilyonectria radicicola and its Cylindrocarpon-like anamorph represent a species complex that is commonly associated with root rot disease symptoms on a range of hosts. During the course of this study, several species could be distinguished from I. radicicola sensu stricto based on morphological and

  1. Desfolha, população de plantas e precocidade do milho afetam a incidência e a severidade de podridões de colmo Defoliation, plant population, and earliness of maize affect the incidence and severity of stalk rots

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    Luiz Eduardo Bassay Blum

    2003-10-01

    Full Text Available As relações entre fonte e dreno interferem sobre a ocorrência de podridões de colmo na cultura do milho (Zea mays. O estudo foi conduzido em Lages, SC, para avaliar o efeito da desfolha, população de plantas e híbridos sobre as podridões do colmo do milho. O delineamento experimental foi de blocos ao acaso com parcelas sub-subdivididas e três repetições. Os híbridos P32R21 (superprecoce, Premium (precoce e C333B (tardio foram testados sem desfolha e com 50% de desfolha no estágio de espigamento nas populações de 25.000, 50.000, 75.000 e 100.000 plantas ha-1. Avaliaram-se a incidência e a severidade das podridões do colmo causadas por Colletotrichum graminicola, Diplodia maydis e Fusarium moniliforme. O híbrido P32R21 foi o mais afetado pelos fungos causadores de podridões. Nos híbridos P32R21 e Premium, as plantas desfolhadas foram mais severamente infectadas pelos patógenos do que as intactas. O aumento da população de plantas aumentou a intensidade (incidência ou severidade de podridões de colmo nas plantas intactas e diminuiu a ocorrência nas desfolhadas.The relationship between source and sink interferes on maize (Zea mays stalk rot occurrence. This study was conducted in Lages, SC, Brazil, to evaluate the effect of defoliation, plant population, and hybrids on the intensity (incidence or severity of maize stalk rots. The experiment was set in a randomized complete block design (three replications with a split-split-plot arrangement. The hybrids P32R21 (very early, Premium (early and C333B (late were tested without defoliation and with 50% defoliation on ear formation stage at plant populations of 25,000, 50,000, 75,000, and 100,000 plants ha-1. The incidence and severity of Colletotrichum graminicola, Diplodia maydis and Fusarium moniliforme stalk rots were evaluated. The hybrid P32R21 was the most affected by stalk rots. Defoliation enhanced rots on P32R21 and Premium. Enhancements in plant population increased

  2. Stalking: a neurobiological perspective.

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    Marazziti, Donatella; Falaschi, Valentina; Lombardi, Amedeo; Mungai, Francesco; Dell'Osso, Liliana

    2015-01-01

    Nowadays stalking is becoming a real social emergency, as it may often fuel severe aggressive behaviours. No exhaustive aetiological hypothesis is still available regarding this complex phenomenon. However, the detailed descriptions of some of its peculiar features allow to draw with cautions some general suggestions. Probably stalking may arise from the derangement of those neural networks subserving the so-called social brain and the pair bonding formation, in particular the processes of attachment/separation, attraction/romantic love/reward. In addition, it seems to be modulated by excessive functioning of the dopamine system coupled with decreased serotonin tone. It is believed that the investigation and deepening of its possible neurobiological substrates may be helpful in the prevention of the severe consequences of stalking.

  3. Omphalocele, exstrophy of cloaca, imperforate anus and spinal defect (OEIS Complex) with overlapping features of body stalk anomaly (limb body wall complex).

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    Mandrekar, Suresh R S; Amoncar, Sangeeta; Banaulikar, Siddhartha; Sawant, Vishal; Pinto, R G W

    2014-04-01

    OEIS is an extremely rare constellation of malformations, which includes omphalocele, exstrophy of cloaca, imperforate anus, and spinal defect. We report here autopsy findings in a case of OEIS complex, which apart from the major anomalies of the complex had bilateral club foot that is, congenital talipes equinovarus, right hydroureter, and body stalk anomaly. The umbilical cord was absent, and the umbilical vessels were embedded in an amniotic sheet, which connected the skin margin of the anterior body wall defect to the placenta, this feature being the hallmark of limb body wall complex (LBWC). This case further supports the view that OEIS and LBWC represent a continuous spectrum of abnormalities rather than separate conditions and may share a common etiology and pathogenetic mechanism as proposed by some authors.

  4. Root rots

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    Kathryn Robbins; Philip M. Wargo

    1989-01-01

    Root rots of central hardwoods are diseases caused by fungi that infect and decay woody roots and sometimes also invade the butt portion of the tree. By killing and decaying roots, root rotting fungi reduce growth, decrease tree vigor, and cause windthrow and death. The most common root diseases of central hardwoods are Armillaria root rot, lnonotus root rot, and...

  5. Podridão peduncular e qualidade de mangas 'Tommy atkins' procedentes do mercado atacadista de Campina Grande-PB Stalk rot and quality of 'Tommy atkins' mangos from the wholesale market of Campina Grande-PB, Brazil

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    Erbs Cintra de Souza Gomes

    2010-12-01

    one of the largest producers of mango (Mangifera indica L. in the world. However, significant losses are observed in all stages of production chain, mainly in the retail market, which are correlated almost entirety to incidence of fungal diseases. In this way, the objective of this study was to determine the incidence of natural infection of Lasiodiplodia theobromae, causal agent of stem-end rot, and postharvest quality of 'Tommy Atkins' mangos, traded in the wholesale market of the Central de Abastecimento (EMPASA from Campina Grande, Paraíba State, Brazil. To determine natural incidence of the disease it was collected 40 fruits at mature-green maturity stage from four different wholesale marketing stores at EMPASA that were sent to Laboratory of Phytopathology (CCA/UFPB. After sanitization, fruits were kept at room conditions (28 ± 2 ºC and RH 75 ± 6% during eight days, determining first symptoms and signals of the pathogen. The characteristics of quality were determined by collecting 10 fruits from each wholesale marketing store. Fruits were transported to the Laboratory of Biology and Postharvest Technology (CCA/UFPB, where it was evaluated Soluble Solids (SS, Titratable Acidity (TA, SS/TA, and pH. Data were subjected to variance analysis of and means compared by the Tukey test at 5% of probability. Mango commercialized in the wholesale market of EMPASA, Campina Grande, showed low SS and high TA contents characterizing fruit at the beginning of maturation. Fruits showed 88.9% of natural incidence of stalk rot in the eighth day of storage, which is deleterious for retail quality of fruits, characterizing a causal factor for the higher postharvest losses.

  6. Creation of initial breeding material of potato with complex resistance to Fusarium dry rot and tuber late blight

    Directory of Open Access Journals (Sweden)

    В. В. Гордієнко

    2017-09-01

    Full Text Available Purpose. To select the initial breeding material with complex resistance to Fusarium dry rot and tuber late blight among the created potato of secondary interspecific hyb­rids. Methods. Interspecific hybridization, laboratory test, analytical approach. Results. Based on the interspecific hybridization, the initial breeding material was created and the degree of its resistance to the above pathogens was determined by way of artificial infection of tubers with the inoculum of such fungi as Fusarium sambucinum Fuck and Phytophthora infestans (Mont. De Bary. During interspecific hybridization based on schemes of saturating and enriching crosses, using forms of various species with a high phenotypic expression of resistance to Fusarium dry rot, the result of the cumulative effect of genes that control resistance to the pathogen was observed. Crossing combinations differed significantly for the degree of population average manifestation of resistance to the diseases. Conclusions. Combinations В54, В53, В61 with a mean resistance (above 7 grades to Fusarium dry rot have been selected. Such combinations as B52, B50 and B54 had increased resistance to tuber late blight. It was found that the combination В54 is characterized by complex resistance to both diseases. For further work, the following samples with complex resistance to Fusarium dry rot and tuber late blight (7 grades or more were selected: В59с42, В59с43, В50с16, В50с19, В50с44, В51с1, В51с26, В51с28, В52с11, В52с23, В52с24, В52с29, В53с1, В53с11, В53с17 , В53с23, В54с13, В54с14.

  7. Stalking: Notion, characteristics and social responses

    Directory of Open Access Journals (Sweden)

    Nikolić-Ristanović Vesna

    2007-01-01

    Full Text Available In the last two decades stalking phenomenon is recognized and actualized in the world in professional, scientific circles, in media and the everyday talk. Recently, stalking is identified as specific and complex problem studied separately from domestic violence, workplace abuse, sexual harassment, threats, following, homicide, voyeurism and the other phenomenon to which stalking may or not be related. This paper is aimed to determine the notion of stalking and its relationship with similar phenomena, to review the research about the prevalence and nature of stalking, as well as to review the measures for its prevention, supporting victims and prosecution of offenders. Finally, the paper intend to contribute toward initiation of research and legal reforms regarding stalking victimisation in Serbia.

  8. Induction of Laccase, Lignin Peroxidase and Manganese Peroxidase Activities in White-Rot Fungi Using Copper Complexes

    Directory of Open Access Journals (Sweden)

    Martina Vrsanska

    2016-11-01

    Full Text Available Ligninolytic enzymes, such as laccase, lignin peroxidase and manganese peroxidase, are biotechnologically-important enzymes. The ability of five white-rot fungal strains Daedaleopsis confragosa, Fomes fomentarius, Trametes gibbosa, Trametes suaveolens and Trametes versicolor to produce these enzymes has been studied. Three different copper(II complexes have been prepared ((Him[Cu(im4(H2O2](btc·3H2O, where im = imidazole, H3btc = 1,3,5-benzenetricarboxylic acid, [Cu3(pmdien3(btc](ClO43·6H2O and [Cu3(mdpta3(btc](ClO43·4H2O, where pmdien = N,N,N′,N′′,N′′-pentamethyl-diethylenetriamine and mdpta = N,N-bis-(3-aminopropylmethyl- amine, and their potential application for laccase and peroxidases induction have been tested. The enzyme-inducing activities of the complexes were compared with that of copper sulfate, and it has been found that all of the complexes are suitable for the induction of laccase and peroxidase activities in white-rot fungi; however, the newly-synthesized complex M1 showed the greatest potential for the induction. With respect to the different copper inducers, this parameter seems to be important for enzyme activity, which depends also on the fungal strains.

  9. Interaction between N-fertilizer and water availability on borer-rot complex in sugarcane

    OpenAIRE

    Pannuti,Luiz Eduardo da Rocha; Baldin,Edson Luiz Lopes; Gava,Glauber José de Castro; Silva,José Paulo Gonçalves Franco da; Souza,Efrain de Santana; Kölln,Oriel Tiago

    2015-01-01

    This study aimed to evaluate the effects of nitrogen availability in fertigation and rainfed management, as well as their interactions with the incidence of and damage caused by D. saccharalis and red rot in sugarcane. The experiment consisted of four treatments (0 and 150 kg ha–1 of N-fertilizer with irrigation; 0 and 150 kg ha–1 of N-fertilizer in rainfed management) in a randomized complete block design with four replications. The evaluated parameters were the number of holes a...

  10. Stalking in cyberspace.

    Science.gov (United States)

    Deirmenjian, J M

    1999-01-01

    The Internet has revolutionized communication on a global level while creating a medium for stalking. Cyberstalking has emerged as a new form of stalking behavior. While 10 states have passed laws against electronic harassment, there has been great debate about whether electronic stalking constitutes criminal behavior or whether a perpetrator is entitled First Amendment protection. In the psychiatric literature to date, there are no studies of cyberstalking. This article focuses on relevant cases of stalking on the Internet. Specific legal issues associated with cyberstalking, such as boundary laws and freedom of speech, are examined. The psychological profile of the cyberstalker, as well as methods of intervention, are discussed.

  11. Positive Regulation of Staphylococcal Enterotoxin H by Rot (Repressor of Toxin) Protein and Its Importance in Clonal Complex 81 Subtype 1 Lineage-Related Food Poisoning.

    Science.gov (United States)

    Sato'o, Yusuke; Hisatsune, Junzo; Nagasako, Yuria; Ono, Hisaya K; Omoe, Katsuhiko; Sugai, Motoyuki

    2015-11-01

    We previously demonstrated the clonal complex 81 (CC81) subtype 1 lineage is the major staphylococcal food poisoning (SFP)-associated lineage in Japan (Y. Sato'o et al., J Clin Microbiol 52:2637-2640, 2014, http://dx.doi.org/10.1128/JCM.00661-14). Strains of this lineage produce staphylococcal enterotoxin H (SEH) in addition to SEA. However, an evaluation of the risk for the recently reported SEH has not been sufficiently conducted. We first searched for staphylococcal enterotoxin (SE) genes and SE proteins in milk samples that caused a large SFP outbreak in Japan. Only SEA and SEH were detected, while there were several SE genes detected in the samples. We next designed an experimental model using a meat product to assess the productivity of SEs and found that only SEA and SEH were detectably produced in situ. Therefore, we investigated the regulation of SEH production using a CC81 subtype 1 isolate. Through mutant analysis of global regulators, we found the repressor of toxin (Rot) functioned oppositely as a stimulator of SEH production. SEA production was not affected by Rot. seh mRNA expression correlated with rot both in media and on the meat product, and the Rot protein was shown to directly bind to the seh promoter. The seh promoter sequence was predicted to form a loop structure and to hide the RNA polymerase binding sequences. We propose Rot binds to the promoter sequence of seh and unfolds the secondary structure that may lead the RNA polymerase to bind the promoter, and then seh mRNA transcription begins. This alternative Rot regulation for SEH may contribute to sufficient toxin production by the CC81 subtype 1 lineage in foods to induce SFP. Copyright © 2015, American Society for Microbiology. All Rights Reserved.

  12. Broadly Neutralizing Hemagglutinin Stalk-Specific Antibodies Induce Potent Phagocytosis of Immune Complexes by Neutrophils in an Fc-Dependent Manner

    Directory of Open Access Journals (Sweden)

    Caitlin E. Mullarkey

    2016-10-01

    Full Text Available Broadly neutralizing antibodies that recognize the conserved hemagglutinin (HA stalk have emerged as exciting new biotherapeutic tools to combat seasonal and pandemic influenza viruses. Our general understanding of the mechanisms by which stalk-specific antibodies achieve protection is rapidly evolving. It has recently been demonstrated that broadly neutralizing HA stalk-specific IgG antibodies require Fc-Fcγ receptor (FcγR interactions for optimal protection in vivo. Here we examine the neutrophil effector functions induced by stalk-specific antibodies. As the most abundant subset of blood leukocytes, neutrophils represent a critical innate effector cell population and serve an instrumental role in orchestrating downstream adaptive responses to influenza virus infection. Yet, the interplay of HA stalk-specific IgG, Fc-FcγR engagement, and neutrophils has remained largely uncharacterized. Using an in vitro assay to detect the production of reactive oxygen species (ROS, we show that human and mouse monoclonal HA stalk-specific IgG antibodies are able to induce the production of ROS by neutrophils, while HA head-specific antibodies do not. Furthermore, our results indicate that the production of ROS is dependent on Fc receptor (FcR engagement and phagocytosis. We went on to assess the ability of monoclonal HA stalk-specific IgA antibodies to induce ROS. Consistent with our findings for monoclonal IgGs, only HA stalk-specific IgA antibodies elicited ROS production by neutrophils. This induction is dependent on the engagement of FcαR1. Taken together, our findings describe a novel FcR-dependent effector function induced by HA stalk-specific IgG and IgA antibodies, and importantly, our studies shed light on the mechanisms by which HA stalk-specific antibodies achieve protection.

  13. Simulation with models of increasing complexity of CO2 emissions and nitrogen mineralisation, after soil application of labelled pig slurry and maize stalks

    Science.gov (United States)

    Bechini, Luca; Marino Gallina, Pietro; Geromel, Gabriele; Corti, Martina; Cavalli, Daniele

    2015-04-01

    High amounts of nitrogen are available per unit area in regions with intensive livestock operations. In swine farms, pig slurries are frequently incorporated in the soil together with maize stalks. Simulation models may help to understand nitrogen dynamics associated with animal manure and crop residue decomposition in the soil, and to support the definition of best management practices. The objective of this work was to test the ability of different models to simulate CO2 emissions and nitrogen mineralisation during a laboratory incubation (under optimal soil water content and constant temperature) of maize stalks (ST) and pig slurry (PS). A loam soil was amended with labelled (15N) or unlabelled maize stalks and pig slurries, in the presence of ammonium sulphate (AS). These treatments were established: unfertilised soil; ST15 + AS + PS; ST + AS15 + PS; and ST + AS + PS15. During 180 days, we measured CO2 emissions; microbial biomass C, N, and 15N; and soil mineral N (SMN and SM-15N). Three models of increasing complexity were calibrated using measured data. The models were two modifications of ICBM 2B/N (Kätterer and Andrén, 2001) and CN-SIM (Petersen et al., 2005). The three models simulated rather accurately the emissions of CO2 throughout the incubation period (Relative Root Mean Squared Error, RRMSE = 8-25). The simplest model (with one pool for ST and one for PS) strongly overestimated SMN immobilisation from day 3 to day 21, both in the treatments with AS15 and PS15 (RRMSE = 27-30%). The other two models represented rather well the dynamics of SMN in the soil (RRMSE = 21-25%), simulating a fast increase of nitrate concentration in the first days, and slower rates of nitrification thereafter. Worse performances were obtained with all models for the simulation of SM-15N in the treatment with ST15 (RRMSE = 64-104%): experimental data showed positive mineralization of stalk-derived N from the beginning of the incubation, while models strongly underestimated

  14. Broadly Neutralizing Hemagglutinin Stalk-Specific Antibodies Induce Potent Phagocytosis of Immune Complexes by Neutrophils in an Fc-Dependent Manner.

    Science.gov (United States)

    Mullarkey, Caitlin E; Bailey, Mark J; Golubeva, Diana A; Tan, Gene S; Nachbagauer, Raffael; He, Wenqian; Novakowski, Kyle E; Bowdish, Dawn M; Miller, Matthew S; Palese, Peter

    2016-10-04

    Broadly neutralizing antibodies that recognize the conserved hemagglutinin (HA) stalk have emerged as exciting new biotherapeutic tools to combat seasonal and pandemic influenza viruses. Our general understanding of the mechanisms by which stalk-specific antibodies achieve protection is rapidly evolving. It has recently been demonstrated that broadly neutralizing HA stalk-specific IgG antibodies require Fc-Fcγ receptor (FcγR) interactions for optimal protection in vivo Here we examine the neutrophil effector functions induced by stalk-specific antibodies. As the most abundant subset of blood leukocytes, neutrophils represent a critical innate effector cell population and serve an instrumental role in orchestrating downstream adaptive responses to influenza virus infection. Yet, the interplay of HA stalk-specific IgG, Fc-FcγR engagement, and neutrophils has remained largely uncharacterized. Using an in vitro assay to detect the production of reactive oxygen species (ROS), we show that human and mouse monoclonal HA stalk-specific IgG antibodies are able to induce the production of ROS by neutrophils, while HA head-specific antibodies do not. Furthermore, our results indicate that the production of ROS is dependent on Fc receptor (FcR) engagement and phagocytosis. We went on to assess the ability of monoclonal HA stalk-specific IgA antibodies to induce ROS. Consistent with our findings for monoclonal IgGs, only HA stalk-specific IgA antibodies elicited ROS production by neutrophils. This induction is dependent on the engagement of FcαR1. Taken together, our findings describe a novel FcR-dependent effector function induced by HA stalk-specific IgG and IgA antibodies, and importantly, our studies shed light on the mechanisms by which HA stalk-specific antibodies achieve protection. The present study provides evidence that broadly neutralizing HA stalk-specific antibodies induce downstream Fc-mediated neutrophil effector functions. In addition to their ability to

  15. Uso del escobajo como sustrato para el crecimiento de hongos de la pudrición blanca, la producción de enzimas ligninolíticas y la decoloración de tinturas Grape stalks as substrate for white rot fungi, lignocellulolytic enzyme production and dye decolorization

    Directory of Open Access Journals (Sweden)

    Laura Levin

    2012-06-01

    Full Text Available El objetivo de este trabajo fue evaluar el potencial del escobajo, un residuo agroindustrial, como sustrato para el crecimiento y la producción de enzimas lignocelulósicas de tres hongos causantes de pudrición blanca en la madera: Trametes trogii, Stereum hirsutum y Coriolus antarcticus. Para ello se utilizaron técnicas de fermentación en estado sólido. También se ensayó la decoloración de colorantes industriales sobre estos cultivos. La pérdida de peso seco del sustrato fue similar después del día 60 (33-43 %. C. antarcticus produjo las mayores actividades de lacasa y Mn-peroxidasa (33,0 y 1,6 U/g peso seco. La mayor actividad endoglucanasa fue medida en cultivos de S. hirsutum (10,4 U/g, y la mayor actividad endoxilanasa en T. trogii (14,6 U/g. El sistema C. antarcticus/escobap mostró un importante potencial para su aplicación en la biorremediación de efluentes textiles, con porcentajes de decoloración de 93, 86, 82, 82, 77 y 58 % para índigo carmín, verde de malaquita, azure B, azul R brillante de remazol, cristal violeta y xilidina, respectivamente, en 5 h.The aim of this work was to evaluate the potential of grape stalks, an agroindustrial waste, for growth and lignocellulolytic enzyme production via solid-state fermentation, using the following three white rot fungi: Trametes trogii, Stereum hirsutum and Coriolus antarcticus. The decolorization of several dyes by the above mentioned cultures was also investigated. Similar values of dry weight loss of the substrate were measured after 60 days (33-43 %. C. antarcticus produced the highest laccase and Mn-peroxldase activities (33.0 and 1.6 U/g dry solid. The maximum endoglucanase production was measured in S. hirsutum cultures (10.4 U/g, while the endoxylanase peak corresponded to T. trogii (14.6 U/g. The C. antarcticus/grape stalk system seems potentially competitive in bioremediation of textile processing effluents, attaining percentages of decolorization of 93, 86, 82, 82

  16. Production and optimization of ligninolytic enzymes by white rot ...

    African Journals Online (AJOL)

    The present study deals with production of ligninolytic enzymes from an indigenous white rot fungus Schizophyllum commune IBL-06 by using banana stalk as substrate through the process of solid state fermentation. The production process was further improved by optimizing a number of physical parameters such as ...

  17. Body Stalk Syndrome: A Curiosity

    Directory of Open Access Journals (Sweden)

    Anita Javalgi

    2014-07-01

    Full Text Available Limb body wall complex (LBWC /Body stalk syndrome anomaly refers to a rare complicated polymalformative fetal malformation syndrome of uncertain etiology firstly described by Van Allen et al in 1987. There are very few cases reported in literature and thus we report a rare case of LBWC. Twenty seven years female presented to labour room with 32 weeks of gestation with no prenatal care and delivered a low birth weight still born fetus weighing 1100gms. On fetal autopsy large abdominal wall defect was noted with difficulty in identifying abdomino-pelvic organs and ambiguous genitalia. Placenta weighed 250gms with attached short umbilical cord measuring 7cms, arising from periphery. A cyst noted attached to placental membrane measuring 9x5cms which on dissection retrieved partially maldeveloped organs. Post mortem radiological findings included Absence of right femur with short tibia and right fibula, Complex vestibral malformation, Craniosynostosis and Overcrowding of ribs.

  18. Stalking by females.

    Science.gov (United States)

    Carabellese, F; La Tegola, D; Alfarano, E; Tamma, M; Candelli, C; Catanesi, R

    2013-07-01

    The aim of this review was to study "female stalking" in the sense of the specific traits characterizing the phenomenon of stalking behaviour committed by women. The main medical databases were searched (Medline, Social Science Research Network, Apa Psyc Net), and 67 articles were selected, reporting studies conducted in clinical populations, case series, reports, reviews, retrospective studies and original articles. We outline a variety of different tactics adopted by female stalkers and a lesser propensity to pass on to physical violence. Nevertheless, female stalkers are more frequently affected by erotomania, and this condition generally increases the risk of violence. If there have previously been intimate relations between the stalker and her victim, this will increase the risk of violence. In a significant proportion of female stalkers, the behavior is carried out in the occupational setting, especially in the field of psychotherapy, where the male-female ratio is reversed. No significant differences emerged between the motivations of heterosexual or homosexual stalkers. In the category of crimes of harassment committed by women, stalking, at least in Italy, seems to be among the most prominent.

  19. Campus Stalking: Theoretical Implications and Responses

    Science.gov (United States)

    Scott, Joel H.; Cooper, Dianne L.

    2011-01-01

    The problem of campus stalking requires uniting several departments to develop a response plan reflective of the comprehensive nature of campus stalking. This article highlights how research on stalking, stalking theories, and related environmental theories support the formation of a cross-functional team to develop a multifaceted response to this…

  20. Fusarium ananatum sp. nov. in the Gibberella fujikuroi species complex from pineapples with fruit rot in South Africa.

    Science.gov (United States)

    Jacobs, Adriaana; Van Wyk, Pieter Schalk; Marasas, Walter F O; Wingfield, Brenda D; Wingfield, Michael J; Coutinho, Teresa A

    2010-07-01

    Pineapple (Ananas comosus) is native to South America and widely planted as a fruit crop in the tropics and sub-tropics. This plant is susceptible to a number of fungal diseases of which the most severe is fusariosis. The disease is caused by Fusarium guttiforme and occurs only in South and Central America. The occurrence of a similar disease on pineapples in South Africa has prompted a re-evaluation of the Fusarium sp. associated with pineapple fruit rot. Phylogenetic relationships of isolates from pineapples collected in Brazil and South Africa were assessed based on sequence data for the translation elongation factor-1-α, histone H3 and β-tubulin gene regions. Analyses showed that the South African isolates represent a species distinct from Brazilian isolates. The South African isolates are characterised by a concentration of aerial mycelium at the centres of the colonies, different to the Brazilian isolates that have an even distribution of aerial mycelium. Both phylogenetic and morphological data show that the disease on pineapple in South Africa is caused by a new Fusarium species described here as F. ananatum sp. nov. Copyright © 2010. Published by Elsevier Ltd.

  1. Stalking the ultimate particle

    CERN Multimedia

    2003-01-01

    If you missed the ARTE programme entitled "L'Ultime Particule" broadcast in February, you have another chance to catch it in CERN's Main Auditorium on 13 March. "L'Ultime Particule" is a documentary by the French director Michel Andrieu that seeks to explain particle physics through a contemplative quest for the research physicists of matter of today and yesteryear. Invariably kitted out in a red parka and a soft hat, the programme's investigator scours the planet and the archives in search of the research physicists who are stalking the ultimate particle, the Higgs boson, in their quest to understand the structure of matter. Naturally enough, CERN is an important stage of his journey where Michel Andrieu and his team spent several days last year. Both from the physics and metaphysical points of view, "L'Ultime Particule" is worth seeing. The film's director, Michel Andrieu, will introduce his documentary and answer questions from the audience after the documentary has been shown. L'Ultime Particule by Mic...

  2. Analysis of microbial taxonomical groups present in maize stalks suppressive to colonization by toxigenic Fusarium spp.: A strategy for the identification of potential antagonists

    NARCIS (Netherlands)

    Köhl, J.; Lombaers-van der Plas, C.H.; Moretti, A.; Bandyopadhyay, R.; Somma, S.; Kastelein, P.

    2015-01-01

    Pink ear rot of maize caused by Fusarium verticillioides, Fusariumproliferatum and Fusariumgraminearumcan lead to severe yield losses and contamination of grain with a range of mycotoxins. Maize stalks colonized by Fusarium spp. are the main primary inoculum source for Fusarium incited epidemics in

  3. Persistence of Gliocephalotrichum spp. causing fruit rot of rambutan (Nephelium lappaceum L.) in Puerto Rico

    Science.gov (United States)

    Worldwide, fruit rot of rambutan is an important problem that limits the storage, marketing and long-distance transportation of the fruit. A complex of pathogens has been reported to cause fruit rot of rambutan and significant post-harvest economic losses. During 2009 and 2011 rambutan fruit rot was...

  4. Stalking the IQ Quark.

    Science.gov (United States)

    Sternberg, Robert J.

    1979-01-01

    An information-processing framework is presented for understanding intelligence. Two levels of processing are discussed: the steps involved in solving a complex intellectual task, and higher-order processes used to decide how to solve the problem. (MH)

  5. Evaluation of cotton stalks destroyers

    OpenAIRE

    Bianchini, Aloisio; Borges, Pedro H. de M.

    2013-01-01

    The destruction of the cotton crop residues (cotton stalks) is a mandatory procedure in Brazil for prophylactic issues, but is a subject unexplored by the research and there are few studies that deal with this issue. However, this is not encouraged in recent decades, studies aimed at developing and evaluating equipment for this purpose. The present study had the objective to evaluate six methods for mechanical destruction of cotton crop residues. Each method was defined based on the principle...

  6. Adolescent stalking and risk of violence✩

    Science.gov (United States)

    Smith-Darden, Joanne P.; Reidy, Dennis E.; Kernsmith, Poco D.

    2018-01-01

    Stalking perpetration and the associated risk for violence among adolescents has generally been neglected. In the present study, 1236 youth completed surveys assessing empirically established stalking indicators, threats and aggression toward stalking victims, dating violence, and violent delinquency. Latent Profile Analysis identified 3 latent classes of boys: non-perpetrators (NP), hyper-intimate pursuit (HIP), and comprehensive stalking perpetrators (CSP) and, and 2 classes for girls: NP and HIP. Boys in the CSP class were the most violent youth on nearly all indices with boys in the HIP class demonstrating an intermediate level of violence compared to NP boys. Girls in the HIP class were more violent than NP girls on all indices. These findings suggest stalking in adolescence merits attention by violence prevention experts. In particular, juvenile stalking may signify youth at risk for multiple forms of violence perpetrated against multiple types of victims, not just the object of their infatuation. PMID:27641644

  7. The Fear Factor: Exploring Predictors of Fear among Stalking Victims throughout the Stalking Encounter

    Science.gov (United States)

    Reyns, Bradford W.; Englebrecht, Christine M.

    2013-01-01

    The crime of stalking has received much research attention, yet there are still important questions to be explored surrounding this behavior. One such question relates to definitions of stalking, including the requirement that victims must express fear to qualify as victims of stalking. The current study addresses this issue by exploring the…

  8. Comparative pulping of sunflower stalks

    Directory of Open Access Journals (Sweden)

    Valerii Barbash

    2016-03-01

    Full Text Available The procedure of holocellulose content determination in non-wood plant raw materials was developed. The strength properties of pulp obtained from sunflower stalks by neutral-sulphite, soda, alkaline sulphite-anthraquinone-ethanol and peracetic methods of delignification were studied. Methodology of comparison of plant materials delignification methods using new lignin-carbohydrate diagram was proposed. It was shown, that the alkaline sulphite-anthraquinone-ethanol method of pulping is characterized by the highest delignification degree and is the most efficient among the studied methods

  9. Utilization of enzyme supplemented Telfairia occidentalis stalk ...

    African Journals Online (AJOL)

    An eight (8) week feeding trial was carried out to assess the use of enzyme natuzyme supplemented Telfairia occidentalis stalk extract as growth inducer in the practical diet for Oreochromis niloticus fingerlings. Five isonitrogenous (35% crude protein) diets at 0 ml of stalk extract and enzyme (TRT 1), 15 ml (TRT 2) and 30 ...

  10. The prevalence of stalking in the Netherlands

    NARCIS (Netherlands)

    van der Aa, S.; Kunst, M.J.J.

    2009-01-01

    Over eight years after the enactment of the Dutch anti-stalking provisions there are still no figures detailing the prevalence of stalking in The Netherlands. This article aims to estimate the lifetime and annual prevalence of this form of victimization within the Dutch population. Questionnaires

  11. Armillaria root rot

    Science.gov (United States)

    First described on grapevines in California in the 1880s, Armillaria root rot occurs in all major grape-growing regions of the state. The causal fungus, Armillaria mellea, infects woody grapevine roots and the base of the trunk (the root collar), resulting in a slow decline and eventual death of the...

  12. Stalking

    Science.gov (United States)

    Safety Exit | X Log in About Us Our Work Our History Leadership Board of Directors Financials Employment Opportunities Internship ... South Dakota Tennessee Texas Utah Vermont Virginia Washington West Virginia Wisconsin Wyoming One Day National Advocacy Agenda ...

  13. Butt Rot of Southern Hardwoods

    Science.gov (United States)

    F. I. McCracken

    1977-01-01

    Butt rot is the most serious cause of cull throughout the South, and affects all hardwood species. Defined as any decay at the base of a living tree, butt rot accounts for the loss of millions of board feet of southern hardwood timber annually. In one study of loess and alluvial hardwood sites in the Midsouth, butt rot was found in 40 percent of the trees being...

  14. Adolescent stalking and risk of violence.

    Science.gov (United States)

    Smith-Darden, Joanne P; Reidy, Dennis E; Kernsmith, Poco D

    2016-10-01

    Stalking perpetration and the associated risk for violence among adolescents has generally been neglected. In the present study, 1236 youth completed surveys assessing empirically established stalking indicators, threats and aggression toward stalking victims, dating violence, and violent delinquency. Latent Profile Analysis identified 3 latent classes of boys: non-perpetrators (NP), hyper-intimate pursuit (HIP), and comprehensive stalking perpetrators (CSP) and, and 2 classes for girls: NP and HIP. Boys in the CSP class were the most violent youth on nearly all indices with boys in the HIP class demonstrating an intermediate level of violence compared to NP boys. Girls in the HIP class were more violent than NP girls on all indices. These findings suggest stalking in adolescence merits attention by violence prevention experts. In particular, juvenile stalking may signify youth at risk for multiple forms of violence perpetrated against multiple types of victims, not just the object of their infatuation. Copyright © 2016 The Foundation for Professionals in Services for Adolescents. Published by Elsevier Ltd. All rights reserved.

  15. Some thoughts on the neurobiology of stalking.

    Science.gov (United States)

    Meloy, J Reid; Fisher, Helen

    2005-11-01

    The authors examine the crime of stalking, including the cognitive traits, emotional reactions, attachment pathology, violence patterns and sex differences of samples of stalking offenders. They focus on two common types of stalkers: 1) those who sustain pursuit of a former sexual intimate who has rejected them; and 2) those who pursue a stranger or acquaintance who has failed to return the stalker's romantic overtures. The authors discuss data from neuroimaging (fMRI) studies of romantic love which suggest that these forms of stalking may be associated with heightened activity of subcortical dopaminergic pathways of the "Reward System" of the brain, perhaps in combination with low activity of central serotonin. The authors propose that this set of neural correlates may contribute to the stalker's focused attention, increased energy, following behaviors, obsessive thinking about and impulsivity directed toward the victim. To further explore the neural systems associated with stalking behavior, they also discuss several biopsychological phenomena associated with romantic rejection, including the "protest response," "frustration attraction," "abandonment rage" and "mate guarding." They illustrate the parallels between stalking and addiction. They conclude that stalking may be associated with a specific set of biological components and they offer suggestions for further research into this pathological emotional/motivational state.

  16. Disease notes - Bacterial root rot

    Science.gov (United States)

    Bacterial root rot initiated by lactic acid bacteria, particularly Leuconostoc, occurs every year in Idaho sugarbeet fields. Hot fall weather seems to make the problem worse. Although Leuconostoc initiates the rot, other bacteria and yeast frequently invade the tissue as well. The acetic acid bac...

  17. Soft rot erwiniae: from genes to genomes.

    Science.gov (United States)

    Toth, Ian K; Bell, Kenneth S; Holeva, Maria C; Birch, Paul R J

    2003-01-01

    SUMMARY The soft rot erwiniae, Erwinia carotovora ssp. atroseptica (Eca), E. carotovora ssp. carotovora (Ecc) and E. chrysanthemi (Ech) are major bacterial pathogens of potato and other crops world-wide. We currently understand much about how these bacteria attack plants and protect themselves against plant defences. However, the processes underlying the establishment of infection, differences in host range and their ability to survive when not causing disease, largely remain a mystery. This review will focus on our current knowledge of pathogenesis in these organisms and discuss how modern genomic approaches, including complete genome sequencing of Eca and Ech, may open the door to a new understanding of the potential subtlety and complexity of soft rot erwiniae and their interactions with plants. The soft rot erwiniae are members of the Enterobacteriaceae, along with other plant pathogens such as Erwinia amylovora and human pathogens such as Escherichia coli, Salmonella spp. and Yersinia spp. Although the genus name Erwinia is most often used to describe the group, an alternative genus name Pectobacterium was recently proposed for the soft rot species. Ech mainly affects crops and other plants in tropical and subtropical regions and has a wide host range that includes potato and the important model host African violet (Saintpaulia ionantha). Ecc affects crops and other plants in subtropical and temperate regions and has probably the widest host range, which also includes potato. Eca, on the other hand, has a host range limited almost exclusively to potato in temperate regions only. Disease symptoms: Soft rot erwiniae cause general tissue maceration, termed soft rot disease, through the production of plant cell wall degrading enzymes. Environmental factors such as temperature, low oxygen concentration and free water play an essential role in disease development. On potato, and possibly other plants, disease symptoms may differ, e.g. blackleg disease is associated

  18. First report of Fusarium redolens causing crown rot of wheat (Triticum spp.) in Turkey

    Science.gov (United States)

    Fusarium crown rot, caused by a complex of Fusarium spp., is a yield-limiting disease of wheat world-wide, especially in dry Mediterranean climates. In order to identify Fusarium species associated with crown rot of wheat, a survey was conducted in summer 2013 in the major wheat growing regions of T...

  19. Cultural Models Shaping Stalking From a Content Analysis of Italian Newspapers

    Directory of Open Access Journals (Sweden)

    Andrea Caputo

    2013-08-01

    Full Text Available The increasing spread of stalking in recent years has captured the community’s and media’s interest and highlighted complex legal, clinical and cultural issues. This phenomenon, far from being an individual problem, can be considered as a product of a growing culture that seems to reveal the crisis of current rules of social coexistence. This work aims at detecting the cultural repertoires that organise the stalking discourse, from an analysis of Italian newspaper articles, within a socio-constructivist paradigm. Emotional text analysis was conducted on a corpus of headlines and subheadings derived from 496 articles. These articles were published in major national newspapers and helped to identify four cultural repertoires (clusters that characterise the social representation of stalking: gender violence and women’s social independence (Cluster 1, psychological violence and control as illusion of intimacy (Cluster 2, anomic violence and intolerant individualism (Cluster 3, domestic violence and women’s marital obligation (Cluster 4. These repertoires are conceived along three latent dimensions which respectively refer to the cultural functions of stalking (Factor 1, representations of the victim (Factor 2, and gender inequalities (Factor 3. The paper offers a key to a social contextualisation of stalking in Italy, in order to re-think work practices within institutional agencies that deal with this phenomenon.

  20. Accommodating Discontinuities in Dimeric Left-Handed Coiled Coils in ATP Synthase External Stalks

    Science.gov (United States)

    Wise, John G.; Vogel, Pia D.

    2009-01-01

    ATP synthases from coupling membranes are complex rotary motors that convert the energy of proton gradients across coupling membranes into the chemical potential of the β-γ anhydride bond of ATP. Proton movement within the ring of c subunits localized in the F0-sector drives γ and ɛ rotation within the F1α3β3 catalytic core where substrates are bound and products are released. An external stalk composed of homodimeric subunits b2 in Escherichia coli or heterodimeric bb′ in photosynthetic synthases connects F0 subunit a with F1 subunits δ and most likely α. The external stalk resists rotation, and is of interest both functionally and structurally. Hypotheses that the external stalk contributes to the overall efficiency of the reaction through elastic coupling of rotational substeps, and that stalks form staggered, right-handed coiled coils, are investigated here. We report on different structures that accommodate heptad discontinuities with either local or global underwinding. Analyses of the knob-and-hole packing of the E. coli b2 and Synechocystis bb′ stalks strongly support the possibility that these proteins can adopt conventional left-handed coiled coils. PMID:19348765

  1. Comparative Study of Root, Stalk and Leaf Essential Oils of ...

    African Journals Online (AJOL)

    MBI

    2017-03-03

    Mar 3, 2017 ... separated into leaf, stalk and root parts. The plant parts (root, stalk and leaf) were cut into small pieces before extraction of their essential oils. Oil isolation. 250g each of the root, stalk and leaf parts of the plant were separately introduced into a 5 litre flask and water added until the sample was well.

  2. Pectobacterium carotovorum subsp. carotovorum – the Causal Agent of Calla Soft Rot in Serbia and Montenegro

    Directory of Open Access Journals (Sweden)

    Milan Ivanović

    2009-01-01

    Full Text Available Bacterial strains were isolated from above- and underground parts of diseased calla plants originating from different localities in Serbia and one locality in Montenegro. They were characterized by studying their pathogenic, cultural, biochemical and physiologicalcharacteristics. All investigated strains caused soft rot of calla leaf stalks, potato slices and aloe leaves, and induced hypersensitive reaction on tobacco. Bacteriological properties of the strains indicated that symptoms on calla plants were caused by Gram-negative, nonfluorescent, oxidase negative, catalase positive and facultatively anaerobic bacterium belonging to the genus Pectobacterium. The investigated strains grew at 37ºC and in 5% NaCl, utilised lactose and trechalose, and produced neither indol nor lecitinase. These results, as well as the characteristic growth on Logan’s differential medium indicated that soft rot of tuber and stem base of calla plants was caused by Pectobacterium carotovorum subsp. carotovorum. This is the first report of this pathogen affecting calla plants in Serbia.

  3. Composting winery waste: sludges and grape stalks.

    Science.gov (United States)

    Bertran, E; Sort, X; Soliva, M; Trillas, I

    2004-11-01

    The composting of winery waste is an alternative to the traditional disposal of residues, and also involves a commitment to reducing the production of waste products. We studied two residues (sludge and grape stalks), mixed in two proportions (1:1 and 1:2 sludge and grape stalks (v/v)), and we also examined the effects of grinding the grape stalks. Our results showed that composting the assayed materials was possible. Best results were obtained in the compost heap in which the residues were mixed in the proportion 1:2, and where the grape stalks had been previously ground. Optimum results required a moisture around 55% and a maximum temperature around 65 degrees C and an oxygen concentration not lower than 5-10%. The resulting compost had a high agronomic value and is particularly suitable for the soils of the vineyards which have a very low organic matter content. The compost can be reintroduced into the production system, thereby closing the residual material cycle.

  4. STALKED BARNACLES CONCHODERMA AURITUM ON AN ...

    African Journals Online (AJOL)

    lower jaw, the palate and the penis of the sperm whale - Carke 1966). The occurrence of. C. auritum on the body skin of an elephant seal is therefore ... It can be inferred from Sorensen's remark that "barnacles up to an inch in length have been seen ... " that a stalked barnacle was involved, and Laws indeed refers to those.

  5. Stability of the 'L12 stalk' in ribosomes from mesophilic and (hyper)thermophilic Archaea and Bacteria.

    Science.gov (United States)

    Shcherbakov, D; Dontsova, M; Tribus, M; Garber, M; Piendl, W

    2006-01-01

    The ribosomal stalk complex, consisting of one molecule of L10 and four or six molecules of L12, is attached to 23S rRNA via protein L10. This complex forms the so-called 'L12 stalk' on the 50S ribosomal subunit. Ribosomal protein L11 binds to the same region of 23S rRNA and is located at the base of the 'L12 stalk'. The 'L12 stalk' plays a key role in the interaction of the ribosome with translation factors. In this study stalk complexes from mesophilic and (hyper)thermophilic species of the archaeal genus Methanococcus and from the Archaeon Sulfolobus solfataricus, as well as from the Bacteria Escherichia coli, Geobacillus stearothermophilus and Thermus thermophilus, were overproduced in E.coli and purified under non-denaturing conditions. Using filter-binding assays the affinities of the archaeal and bacterial complexes to their specific 23S rRNA target site were analyzed at different pH, ionic strength and temperature. Affinities of both archaeal and bacterial complexes for 23S rRNA vary by more than two orders of magnitude, correlating very well with the growth temperatures of the organisms. A cooperative effect of binding to 23S rRNA of protein L11 and the L10/L12(4) complex from mesophilic and thermophilic Archaea was shown to be temperature-dependent.

  6. Occurrence of Zearalenols (Diastereomeric Mixture) in Corn Stalk Rot and Their Production by Associated Fusarium Species

    OpenAIRE

    Bottalico, Antonio; Visconti, Angelo; Logrieco, Antonio; Solfrizzo, Michele; Mirocha, Chester J.

    1985-01-01

    Zearalenol was extracted from Fusarium-infected stems of corn from southern Italy. The toxin, which appeared as a single compound in various thin-layer chromatography systems, was resolved by high-pressure liquid chromatography into two components. A gas chromatography-mass spectrometry examination of a purified fraction confirmed the natural occurrence of zearalenol as a diastereomeric mixture and led to the identification of alpha (56 ng/g) and beta (27 ng/g) isomers. Among nine Fusarium sp...

  7. Biochemical response and host-pathogen relation of stalk rot fungi ...

    African Journals Online (AJOL)

    Dr. nirupma

    or by cutting off the supply of water and nutrients from the roots. It causes ... distilled water. To this, one drop of Tween-20 was added and spore suspension was stirred continuously to avoid clumping/sticking together of spores on the upper surface of the water. The suspension ..... the pathogenesis-related PRms protein.

  8. Root rots of common and tepary beans in Puerto Rico

    Science.gov (United States)

    Root rots are a disease complex affecting common bean and can be severe in bean growing areas in the tropics and subtropics. The presence of several pathogens makes it difficult to breed for resistance because of the synergistic effect of the pathogens in the host and the interaction of soil factors...

  9. Short-Stalked Prosthecomicrobium hirschii Cells Have a Caulobacter-Like Cell Cycle.

    Science.gov (United States)

    Williams, Michelle; Hoffman, Michelle D; Daniel, Jeremy J; Madren, Seth M; Dhroso, Andi; Korkin, Dmitry; Givan, Scott A; Jacobson, Stephen C; Brown, Pamela J B

    2016-02-01

    The dimorphic alphaproteobacterium Prosthecomicrobium hirschii has both short-stalked and long-stalked morphotypes. Notably, these morphologies do not arise from transitions in a cell cycle. Instead, the maternal cell morphology is typically reproduced in daughter cells, which results in microcolonies of a single cell type. In this work, we further characterized the short-stalked cells and found that these cells have a Caulobacter-like life cycle in which cell division leads to the generation of two morphologically distinct daughter cells. Using a microfluidic device and total internal reflection fluorescence (TIRF) microscopy, we observed that motile short-stalked cells attach to a surface by means of a polar adhesin. Cells attached at their poles elongate and ultimately release motile daughter cells. Robust biofilm growth occurs in the microfluidic device, enabling the collection of synchronous motile cells and downstream analysis of cell growth and attachment. Analysis of a draft P. hirschii genome sequence indicates the presence of CtrA-dependent cell cycle regulation. This characterization of P. hirschii will enable future studies on the mechanisms underlying complex morphologies and polymorphic cell cycles. Bacterial cell shape plays a critical role in regulating important behaviors, such as attachment to surfaces, motility, predation, and cellular differentiation; however, most studies on these behaviors focus on bacteria with relatively simple morphologies, such as rods and spheres. Notably, complex morphologies abound throughout the bacteria, with striking examples, such as P. hirschii, found within the stalked Alphaproteobacteria. P. hirschii is an outstanding candidate for studies of complex morphology generation and polymorphic cell cycles. Here, the cell cycle and genome of P. hirschii are characterized. This work sets the stage for future studies of the impact of complex cell shapes on bacterial behaviors. Copyright © 2016, American Society for

  10. Stalking: A Multidimensional Framework for Assessment and Safety Planning.

    Science.gov (United States)

    Logan, T K; Walker, Robert

    2015-09-03

    Despite the high prevalence of stalking and the risk of harm it poses to victims, arrest rates, prosecutions, and convictions for stalking continue to be low in the United States. The overall goal of this article is to introduce a multidimensional framework of stalking that adds to the current literature by (1) providing a conceptual framework consistent with legal elements of many stalking statutes to facilitate assessment, communication, documentation, and safety planning for stalking several victims; (2) introducing a more systematic way of assessing course of conduct and the context of fear in stalking situations in order to increase the understanding of cumulative fear for stalking victims; (3) emphasizing the aspects of stalking harm that go beyond violence and that show how harm from stalking accumulates over time including life sabotage; and (4) discussing 12 risk factors derived from the overall multidimensional framework that can be used to describe the big picture of stalking and to facilitate safety planning for victims. Implications for future research are discussed. © The Author(s) 2015.

  11. The consequences of coping with stalking

    DEFF Research Database (Denmark)

    Johansen, Katrine Bindesbøl Holm; Tjørnhøj-Thomsen, Tine

    2016-01-01

    OBJECTIVES: The purpose of this article is to explore: (1) how victims of stalking experience the phenomenon in their daily life, (2) how the nature of stalking informs the victim's internal coping strategies, and (3) how the victims' internal coping strategies negatively affect their daily life...... indicate that rather than the stalkers' harassment itself; it is the unpredictability of the stalkers' potential actions that inform the victims' primary coping strategy-self-regulation. Self-regulation consists of various strategies victims employ to avoid the stalker. Our analysis shows that self......-regulation as a coping strategy has social and psychological consequences for the victims, leading to various degrees of social isolation and apprehension. CONCLUSIONS: We conclude that it is necessary to consider how professionals advise victims to cope with their situation as how legal measures should focus...

  12. Lo stalking, un reato senza genere

    Directory of Open Access Journals (Sweden)

    Annamaria Iaccarino

    2015-09-01

    Full Text Available An individual who watches, follows, tracks and controls the victim with the aim of intervening, in a more or less violent way, in their private life is called a stalker or a “prowler always on the lookout”, because they commit repeated actions or attempted contacts or real communications, not desired by the victim, which may cause discomfort, anxiety, nuisance, concern and fear to the victim. Stalking is a term that may apply to any gender. To Lombroso’s “monster woman” and Hart’s “old maids’ madness” it is necessary to add the phenomenon of stalking committed by women whose modus operandi, without doubt, is more sly and subtle than the one of men. It refers to the retrospective act analysed by classic theories.

  13. Briquetting of Charcoal from Sesame Stalk

    Directory of Open Access Journals (Sweden)

    Alula Gebresas

    2015-01-01

    Full Text Available Due to the easy availability of wood in Ethiopia, wood charcoal has been the main source fuel for cooking. This study has been started on sesame stalk biomass briquetting which can potentially solve the health problems and shortage of energy, which consequently can solve deforestation. The result of the data collection shows that, using 30% conversion efficiency of carbonizer, it was found that more than 150,000 tonnes of charcoal can be produced from the available sesame stalk in Humera, a place in north Ethiopia. The clay binders that are mixed with carbonized sesame stalk were found to have 69 liquid limits; thus, the optimum amount of clay that should be added as a binder is 15%, which results in better burning and heat holding capacity and better heating time. The developed briquetting machine has a capacity of producing 60 Kg/hr but the carbonization kiln can only carbonize 3.1 Kg in 2 : 40 hours; hence, it is a bottle neck for the briquette production. The hydrocarbon laboratory analysis showed that the calorific value of the charcoal produced with 15% clay content is 4647.75 Cal/gm and decreases as clay ratio increases and is found to be sufficient energy content for cooking.

  14. Investigation on the Fiber Biometry and Chemical Compounds of Bast and without Bast Stalk of Cotton Stalk Sahel Variety

    Directory of Open Access Journals (Sweden)

    A.Reza Seraian

    2012-01-01

    Full Text Available In order to determine the fiber dimensions, physical and chemical properties of the bast and without bast stalk of Sahel-Variety of cotton stalk, required samples were prepared and studied. The results showed that fiber and lumen diameter and  cell wall thickness of  without bast stalk fibers were greater than those of bast fibers, while bast fibers were longer. Thus, this fibers can be classified as short and medium length fibers respectively.Data showed that the Length/ Diameter ratio and Runkle ratio of the bast fibers were greater than those of without bast stalk fibers, and flexibility coefficient in without bast stalk fibers was greater. Stalk with higher diameter had less bast proportion.Oven-dried density and swelling and shrinkage values of thicker stalks were greater than those of thinner ones, but apparent and basic densities,as well as porosity in thinner stalks were higher. Chemical Properties of bast and without bast stalk were respectively as follow: cellulose 39.27% and 48.3%,lignin 23.93% and 21.89% ,extractives 6.06% and 3.23% , ash content 6.36% and 1.85% ,one percent sodium hydroxide solubility 48.35% and 21.275% and hot water solubility19.48% and 9.68%.These indicate that without bast stalk fibers are more suitable than bast fibers for pulp production, but bast fibers are preferred in terms of fiber length.

  15. Is This Stalking? Perceptions of Stalking Behavior Among Young Male and Female Adults in Hong Kong and Mainland China.

    Science.gov (United States)

    Chan, Heng Choon Oliver; Sheridan, Lorraine

    2017-05-01

    Most studies of stalking are conducted with samples from individualist cultures. Little is known about the phenomenon within collectivist cultures. The present study is arguably the first stalking study conducted in Hong Kong. Specifically, this study investigates a large sample of Asian college students' ( N = 2,496) perceptions of stalking behavior, potential reasons for stalking, and coping strategies that may be employed by stalking victims. Associations between these variables and gender and culture (Hong Kong vs. Mainland China) were also explored. Gender was more strongly associated with perceptions of stalking behavior than was culture. Gender was less strongly associated with perceptions concerning motivations for stalking and the effectiveness of coping strategies that may be employed by stalking victims than was culture. Effect sizes for all associations with culture were small, perhaps due to a high degree of similarity between the two cultures examined. The findings are generally supportive of similar results produced by previous work conducted within individualistic Western cultures, suggesting that stalking and the way that it is perceived may be universal in nature. This study concludes with the argument that legislation against stalking needs to be extended to non-Western countries, such as Hong Kong and Mainland China, as antistalking laws are relatively scarce outside Western industrialized countries.

  16. Pretreatment of Agave americana stalk for enzymatic saccharification.

    Science.gov (United States)

    Yang, Qiang; Pan, Xuejun

    2012-12-01

    Agave americana is one of commonly grown agave species but currently less valuable because its large flower stalk cannot be used for producing alcoholic beverage. In the present study, the stalk was pretreated with dilute acid (DA), sulfite (SPORL), and sodium hydroxide (NaOH) to preliminarily assess its potential as feedstock for bioethanol production. The changes of cell wall components during the pretreatments, enzymatic digestibility of the pretreated stalks, and the adsorption of cellulases on the substrates were investigated. Results indicated that the pretreatments significantly improved the enzymatic digestibility of the agave stalk. SPORL pretreatment gave higher substrate and sugar yields, while NaOH pretreated stalk had better digestibility under the investigated conditions. The better hydrolysability of NaOH-pretreated stalk was attributed to low lignin and hemicellulose content and high affinity to cellulases. Copyright © 2012 Elsevier Ltd. All rights reserved.

  17. Treatment of some Textile Industrial Effluents using Dry Corn Stalk ...

    African Journals Online (AJOL)

    Corn stalk ground to various mesh sizes was used to treat textile effluents obtained from three different industries. These effluents were first pretreated with alum and then charcoal; passing the water through a column, (20cm long and 5cm diameter) containing the ground corn stalk of size diameters of 300mm, 355mm ...

  18. 75 FR 81085 - National Stalking Awareness Month, 2011

    Science.gov (United States)

    2010-12-27

    ... passage of the Violence Against Women Act in 1994, this dangerous and criminal behavior is still often... someone they know. Young adults are particularly vulnerable, and women are at greater risk for stalking victimization than men. Stalking can be a difficult crime to recognize. The majority of survivors do not report...

  19. Maternal uniparental disomy of chromosome 16 and body stalk anomaly.

    Science.gov (United States)

    Chan, Y; Silverman, N; Jackson, L; Wapner, R; Wallerstein, R

    2000-10-02

    We report on a fetus with placental trisomy 16, maternal uniparental disomy (UPD), and body stalk anomaly. Body stalk anomaly is a rare, fatal developmental abnormality consisting of a defective abdominal wall with abdominal organs in a sac outside the abdominal cavity covered by amnion adherent to the placenta with absence or severe shortness of the umbilical cord. Trisomy 16 was identified in the placenta in all cells. Amniocentesis was karyotypically normal. Parental origin studies showed maternal UPD for chromosome 16 in post-termination fetal tissue. The cause of the body stalk anomaly is not clearly defined. There are no other reports of placental karyotype or UPD investigations with body stalk anomaly. To our knowledge, this is the first report of placental trisomy 16, UPD in fetus, and body stalk anomaly, suggesting placental insufficiency or imprinting effects as cause of this anomaly. Am. J. Med. Genet. 94:284-286, 2000. Copyright 2000 Wiley-Liss, Inc.

  20. Canker Rots in Southern Hardwoods

    Science.gov (United States)

    F.I. McCracken

    1978-01-01

    Canker-rot fungi cause serious degrade and cull in southern hardwoods, especially the red oaks. Heartwood decay is the most serious form of damage, but the fungi also kill the cambium and decay the sapwood for as much as 3 feet (.91 m) above and below the entrance point into the tree. The ability of these fungi to kill the cambium and cause cankers distinguishes them...

  1. Cellulose and hemicelluloses recovery from grape stalks.

    Science.gov (United States)

    Spigno, Giorgia; Pizzorno, Tiziana; De Faveri, Dante Marco

    2008-07-01

    In this work, two mild chemical fractionation procedures were compared to separate and recover lignocellulosic components from grape stalks. The first method consisted of mild acid hydrolysis for hemicelluloses separation, followed by an alkaline/oxidative step for lignin solubilization, while in the second method the acid hydrolysis was preceded by an alkali steeping phase. Influence of the length of the first step of both methods (from 2 to 24 h) on monosaccharides and cellulose yields was investigated. The first method allowed a higher sugar recovery for longer times, and a slightly lower amount of cellulose. Cellulose residues from both the methods were comparable for cellulose content and thermal profile (studied by differential scanning calorimetry). Acid hydrolysis of the first step was carried out also in autoclave, showing that xylan degradation could be described by a first order kinetics where at higher temperature the presence of a fast reaction and a slow reacting fraction must be accounted for.

  2. Evaluation of elastic modulus and hardness of crop stalks cell walls by nano-indentation

    Science.gov (United States)

    Yan Wu; Siqun Wang; Dingguo Zhou; Cheng Xing; Yang Zhang; Zhiyong Cai

    2010-01-01

    Agricultural biomaterials such as crop stalks are natural sources of cellulosic fiber and have great potential as reinforced materials in bio-composites. In order to evaluate their potential as materials for reinforcement, the nano-mechanical properties of crop-stalk cell walls, i.e. those of cotton (Gossypium herbaceu) stalk, soybean (Glycine max) stalk, cassava (...

  3. The Abuse of Technology in Domestic Violence and Stalking.

    Science.gov (United States)

    Woodlock, Delanie

    2016-05-12

    We focus on an emerging trend in the context of domestic violence-the use of technology to facilitate stalking and other forms of abuse. Surveys with 152 domestic violence advocates and 46 victims show that technology-including phones, tablets, computers, and social networking websites-is commonly used in intimate partner stalking. Technology was used to create a sense of the perpetrator's omnipresence, and to isolate, punish, and humiliate domestic violence victims. Perpetrators also threatened to share sexualized content online to humiliate victims. Technology-facilitated stalking needs to be treated as a serious offense, and effective practice, policy, and legal responses must be developed. © The Author(s) 2016.

  4. Fusarium basal rot in the Netherlands

    NARCIS (Netherlands)

    Visser, de C.L.M.; Broek, van den R.C.F.M.; Brink, van den L.

    2006-01-01

    Fusarium basal rot of onion, caused by Fusarium oxysporum f.sp. cepae, is a steadily increasing problem in The Netherlands. Financial losses for Dutch farmers confronted with Fusarium basal rot is substantial, due to yield reduction and high storage costs. This paper describes the development and

  5. Variation in oxalate and oxalate decarboxylase production by six species of brown and white rot fungi

    DEFF Research Database (Denmark)

    Hastrup, Anne Christine Steenkjær; Oliver, Jason; Howell, Caitlin

    cell lumen where it quickly dissociates into hydrogen ions and oxalate, resulting in a pH decrease of the environment, and oxalate-cation complexes. Generally, brown rot fungi accumulate larger quantities of oxalic acid in the wood than white rot fungi. The amount of oxalic acid has been shown to vary......  Oxalic acid (C2O4H2), the strongest of the organic acids is produced by both brown and white rot decay fungi and has been connected to various aspects of brown- and white rot decay including the Fenton reaction (Green and Highley, 1997; Munir et al.,2001). Oxalic acid is secreted into the wood...

  6. [Stalking: diagnostics, risk assessment, principles of treatment and forensic psychiatric assessment].

    Science.gov (United States)

    Dressing, H

    2013-11-01

    Stalking is a widespread phenomenon describing a pattern of intrusive and threatening behavior that leads to the victim's perception of being harassed, threatened and frightened. Physical assault and even homicide may sometimes occur in the context of stalking. For psychiatry the following tasks result: (1) diagnosis and classification of stalking cases, (2) risk assessment of stalking cases, (3) counselling and treatment of victims of stalking and, (4) treatment and assessment of stalkers. Empirical findings and instructions are presented for these four areas.

  7. Removal of lead(II) and cadmium(II) from aqueous solutions using grape stalk waste.

    Science.gov (United States)

    Martínez, María; Miralles, Núria; Hidalgo, Soraya; Fiol, Núria; Villaescusa, Isabel; Poch, Jordi

    2006-05-20

    The sorption of lead and cadmium from aqueous solutions by grape stalk waste (a by-product of wine production) was investigated. The effects of the contact time, pH of the solution, ionic medium, initial metal concentration, other metal ions present and ligands were studied in batch experiments at 20 degrees C. Maximum sorption for both metals was found to occur at an initial pH of around 5.5. The equilibrium process was described well by the Langmuir isotherm model, with maximum grape stalk sorption capacities of 0.241 and 0.248 mmol g(-1) for Pb(II) and Cd(II), respectively, at pH around 5.5. Kinetic studies showed good correlation coefficients for a pseudo-second-order kinetic model. The presence of NaCl and NaClO(4) in the solution caused a reduction in Pb and Cd sorption, the latter being more strongly suppressed. The presence of other metals in the uptake process did not affect the removal of Pb, while the Cd uptake was much reduced. HCl or EDTA solutions were able to desorb lead from the grape stalks completely, while an approximately 65% desorption yield was obtained for cadmium. From the results obtained it seems that other mechanisms, such as surface complexation and electrostatic interactions, must be involved in the metal sorption in addition to ion exchange.

  8. Multiplication of Ribosomal P-Stalk Proteins Contributes to the Fidelity of Translation.

    Science.gov (United States)

    Wawiórka, Leszek; Molestak, Eliza; Szajwaj, Monika; Michalec-Wawiórka, Barbara; Mołoń, Mateusz; Borkiewicz, Lidia; Grela, Przemysław; Boguszewska, Aleksandra; Tchórzewski, Marek

    2017-09-01

    The P-stalk represents a vital element within the ribosomal GTPase-associated center, which represents a landing platform for translational GTPases. The eukaryotic P-stalk exists as a uL10-(P1-P2) 2 pentameric complex, which contains five identical C-terminal domains, one within each protein, and the presence of only one such element is sufficient to stimulate factor-dependent GTP hydrolysis in vitro and to sustain cell viability. The functional contribution of the P-stalk to the performance of the translational machinery in vivo , especially the role of P-protein multiplication, has never been explored. Here, we show that ribosomes depleted of P1/P2 proteins exhibit reduced translation fidelity at elongation and termination steps. The elevated rate of the decoding error is inversely correlated with the number of the P-proteins present on the ribosome. Unexpectedly, the lack of P1/P2 has little effect in vivo on the efficiency of other translational GTPase (trGTPase)-dependent steps of protein synthesis, including translocation. We have shown that loss of accuracy of decoding caused by P1/P2 depletion is the major cause of translation slowdown, which in turn affects the metabolic fitness of the yeast cell. We postulate that the multiplication of P-proteins is functionally coupled with the qualitative aspect of ribosome action, i.e., the recoding phenomenon shaping the cellular proteome. Copyright © 2017 American Society for Microbiology.

  9. Behavioral and Mental Health Correlates of Youth Stalking Victimization

    Science.gov (United States)

    Reidy, Dennis E.; Smith-Darden, Joanne P.; Kernsmith, Poco D.

    2018-01-01

    Introduction Although recognized as a public health problem, little attention has been paid to the problem of stalking among youth. Latent profile analysis was used to identify latent groups of adolescent stalking victims and their behavioral and mental health correlates. Methods A cross-sectional sample of 1,236 youths were randomly selected from 13 schools stratified by community risk level (i.e., low, moderate, and high risk) and gender. Students completed surveys assessing behavioral indicators of stalking victimization, as well as substance use, sexual behavior, dating violence, and psychiatric symptoms. Data were collected in 2013 and data analyses were performed in 2015. Results Analysis indicated the presence of a non-victim class, a minimal exposure class, and a victim class for boys and girls alike. Approximately 14% of girls and 13% of boys were in the stalking victim class. Adolescents in the victim class reported more symptoms of post-traumatic stress, mood disorder, and hopelessness, as well as more instances of alcohol use, binge drinking, and physical dating violence victimization. Girls in the victim class also reported engaging in sexting behaviors and oral sex with significantly more partners than their non-victim peers. Conclusions These findings provide valuable knowledge of the prevalence and pertinent health correlates of stalking victimization in adolescence. The data suggest a substantial proportion of adolescents are victims of stalking and are likewise at risk for a number of deleterious health outcomes. As such, this population merits further attention by prevention researchers and practitioners. PMID:27743623

  10. Water relations in untreated and modified wood under brown-rot and white-rot decay

    DEFF Research Database (Denmark)

    Thybring, Emil Engelund

    2017-01-01

    from several literature sources, the water relations of untreated and modified wood decayed by brown-rot and white-rot fungi are examined. The aim is to investigate to what extent observations and assumptions regarding brown-rot and white-rot decay can explain changes in water relations observed during...... and after decay. Although the available experimental data for modified wood is scarce, it indicates that brown-rot and white-rot decay of non-resistant modified wood occurs by similar degradation mechanisms with similar effects on water relations as for untreated wood. From simplistic, mathematical...... modelling, it is shown that changes in water relations during decay can be partly explained by accompanying changes in chemical composition and void volume....

  11. Regrowth of the stalk of the sea lily, Metacrinus rotundus (Echinodermata: Crinoidea).

    Science.gov (United States)

    Nakano, Hiroaki; Hibino, Taku; Hara, Yuko; Oji, Tatsuo; Amemiya, Shonan

    2004-06-01

    Sea lilies are critical to understanding the evolution of the echinoderm body plan, because they are the only extant group whose adults possess a stalk, a prevalent feature in the radiation of a number of primitive echinoderm lineages. Extensive crown regeneration ability has been reported in Metacrinus rotundus, but the regenerative potential of the stalk has never been determined in any species of sea lilies. In this study, we show that M. rotundus whose stalks have been completely excised are capable of stalk regeneration. The process is similar to the growth of the original stalk, but much slower, and the regenerated stalks are not morphologically identical to the original stalk. Since stalk regeneration, in contrast to well-studied regeneration events, probably requires little additional activation of morphogenetic programs, we refer to the stalk regeneration phenomenon as "stalk regrowth" to distinguish it as a special form of regeneration. Since specimens whose entire stalk below the basal plates had been removed were able to regrow, the basal plates, and probably the aboral nerve center within them, are essential for stalk regrowth. Sea lily stalk regrowth is described in detail, and the evolution of feather stars is discussed in light of the growth pattern of the sea lily stalk. Copyright 2004 Wiley-Liss, Inc.

  12. Grapevine bunch rots: impacts on wine composition, quality, and potential procedures for the removal of wine faults.

    Science.gov (United States)

    Steel, Christopher C; Blackman, John W; Schmidtke, Leigh M

    2013-06-05

    Bunch rot of grape berries causes economic loss to grape and wine production worldwide. The organisms responsible are largely filamentous fungi, the most common of these being Botrytis cinerea (gray mold); however, there are a range of other fungi responsible for the rotting of grapes such as Aspergillus spp., Penicillium spp., and fungi found in subtropical climates (e.g., Colletotrichum spp. (ripe rot) and Greeneria uvicola (bitter rot)). A further group more commonly associated with diseases of the vegetative tissues of the vine can also infect grape berries (e.g., Botryosphaeriaceae, Phomopsis viticola ). The impact these fungi have on wine quality is poorly understood as are remedial practices in the winery to minimize wine faults. Compounds found in bunch rot affected grapes and wine are typically described as having mushroom, earthy odors and include geosmin, 2-methylisoborneol, 1-octen-3-ol, 2-octen-1-ol, fenchol, and fenchone. This review examines the current state of knowledge about bunch rot of grapes and how this plant disease complex affects wine chemistry. Current wine industry practices to minimize wine faults and gaps in our understanding of how grape bunch rot diseases affect wine production and quality are also identified.

  13. Pseudomonads associated with midrib rot and soft rot of butterhead lettuce and endive.

    Science.gov (United States)

    Cottyn, B; Vanhouteghem, K; Heyrman, J; Bleyaert, P; Van Vaerenbergh, J; De Vos, P; Höfte, M; Maes, M

    2005-01-01

    During the past ten years, bacterial soft rot and midrib rot of glasshouse-grown butterhead lettuce (Lactuca sativa L. var. capitata) and field-grown endive (Cichorium endivia L.) has become increasingly common in the region of Flanders, Belgium. Severe losses and reduced market quality caused by bacterial rot represent an important economical threat for the production sector. Symptoms of midrib rot are a brownish rot along the midrib of one or more inner leaves, often accompanied by soft rot of the leaf blade. Twenty-five symptomatic lettuce and endive samples were collected from commercial growers at different locations in Flanders. Isolations of dominant bacterial colony types on dilution plates from macerated diseased tissue extracts yielded 282 isolates. All isolates were characterized by colony morphology and fluorescence on pseudomonas agar F medium, oxidase reaction, and soft rot ability on detached chicory leaves. Whole-cell fatty acid methyl esters profile analyses identified the majority of isolates (85%) as belonging to the Gammaproteobacteria, which included members of the family Enterobacteriaceae (14%) and of the genera Pseudomonas (73%), Stenotrophomonas (9%), and Acinetobacter (3%). Predominant bacteria were a diverse group of fluorescent Pseudomonas species. They were further differentiated based on the non-host hypersensitive reaction on tobacco and the ability to rot potato slices into 4 phenotypic groups: HR-/P- (57 isolates), HR-/P+ (54 isolates), HR+/P (16 isolates) and HR+/P+ (35 isolates). Artificial inoculation of suspensions of HR-, pectolytic fluorescent pseudomonads in the leaf midrib of lettuce plants produced various symptoms of soft rot, but they did not readily cause symptoms upon spray inoculation. Fluorescent pseudomonads with phenotype HR+ were consistently isolated from typical dark midrib rot symptoms, and selected isolates reproduced the typical midrib rot symptoms when spray-inoculated onto healthy lettuce plants.

  14. Health Care Professionals as Victims of Stalking: Characteristics of the Stalking Campaign, Consequences, and Motivation in Italy.

    Science.gov (United States)

    Acquadro Maran, Daniela; Varetto, Antonella; Zedda, Massimo; Franscini, Monica

    2015-07-05

    Stalking is a phenomenon characterized by a set of repetitive behaviors, intrusive surveillance, control, communication, and search of contact with a victim who is afraid and/or worried and/or annoyed by such unwanted attention. Literature analysis shows that Health Care Professionals (HCPs) are at greater risk of being stalked than the general population. As described by Mullen, Pathé, Purcell, and Stuart, stalkers may have different motives: relational rejection, an infatuation, an inability to express their own emotions and recognize those of others, or a desire for revenge. The aim of this study was to explore stalkers' motivation as perceived by their victims, characteristics of stalking campaigns, and consequences. A copy of the Italian modified version of The Network for Surviving Stalking (NSS) Questionnaire on Stalking, the Beck Depression Inventory (BDI) and the State Trait Inventory (STAI) Y1-Y2 scales were distributed in six Italian state hospitals. Participants included 1,842 HCPs, 256 (13.9%) of which had been victims. The majority of victims reported that stalkers were Rejected (96, 37.5%), Intimacy seekers (41, 16%), Incompetent suitors (60, 23.4%), and/or Resentful (43, 16.8%; χ 2 = 163.3, p = .001). Stalking campaigns were characterized by several behaviors, principally contact (by telephone calls, text message) and following. The stalking campaign caused in victims both physical and emotional consequences, the most frequent being weight changes, sleep disorders, weakness, apprehension, anger, and fear. The most used coping strategies were moving away and moving toward, the less used was moving inward. Intervention programs and preventive measures (both individual and organizational) for HCP victims and those who could be considered at risk are also discussed. © The Author(s) 2015.

  15. Structural characterization of lignin from grape stalks (Vitis vinifera L.).

    Science.gov (United States)

    Prozil, Sónia O; Evtuguin, Dmitry V; Silva, Artur M S; Lopes, Luísa P C

    2014-06-18

    The chemical structure of lignin from grape stalks, an abundant waste of winemaking, has been studied. The dioxane lignin was isolated from extractive- and protein-free grape stalks (Vitis vinifera L.) by modified acidolytic procedure and submitted to a structural analysis by wet chemistry (nitrobenzene and permanganate oxidation (PO)) and spectroscopic techniques. The results obtained suggest that grape stalk lignin is an HGS type with molar proportions of p-hydroxyphenyl (H), guaiacyl (G) and syringyl (S) units of 3:71:26. Structural analysis by (1)H and (13)C NMR spectroscopy and PO indicates the predominance of β-O-4' structures (39% mol) in grape stalk lignin together with moderate amounts of β-5', β-β, β-1', 5-5', and 4-O-5' structures. NMR studies also revealed that grape lignin should be structurally associated with tannins. The condensation degree of grape stalks lignin is higher than that of conventional wood lignins and lignins from other agricultural residues.

  16. Selective Predation of a Stalking Predator on Ungulate Prey

    Science.gov (United States)

    Heurich, Marco; Zeis, Klara; Küchenhoff, Helmut; Müller, Jörg; Belotti, Elisa; Bufka, Luděk; Woelfing, Benno

    2016-01-01

    Prey selection is a key factor shaping animal populations and evolutionary dynamics. An optimal forager should target prey that offers the highest benefits in terms of energy content at the lowest costs. Predators are therefore expected to select for prey of optimal size. Stalking predators do not pursue their prey long, which may lead to a more random choice of prey individuals. Due to difficulties in assessing the composition of available prey populations, data on prey selection of stalking carnivores are still scarce. We show how the stalking predator Eurasian lynx (Lynx lynx) selects prey individuals based on species identity, age, sex and individual behaviour. To address the difficulties in assessing prey population structure, we confirm inferred selection patterns by using two independent data sets: (1) data of 387 documented kills of radio-collared lynx were compared to the prey population structure retrieved from systematic camera trapping using Manly’s standardized selection ratio alpha and (2) data on 120 radio-collared roe deer were analysed using a Cox proportional hazards model. Among the larger red deer prey, lynx selected against adult males—the largest and potentially most dangerous prey individuals. In roe deer lynx preyed selectively on males and did not select for a specific age class. Activity during high risk periods reduced the risk of falling victim to a lynx attack. Our results suggest that the stalking predator lynx actively selects for size, while prey behaviour induces selection by encounter and stalking success rates. PMID:27548478

  17. Selective Predation of a Stalking Predator on Ungulate Prey.

    Directory of Open Access Journals (Sweden)

    Marco Heurich

    Full Text Available Prey selection is a key factor shaping animal populations and evolutionary dynamics. An optimal forager should target prey that offers the highest benefits in terms of energy content at the lowest costs. Predators are therefore expected to select for prey of optimal size. Stalking predators do not pursue their prey long, which may lead to a more random choice of prey individuals. Due to difficulties in assessing the composition of available prey populations, data on prey selection of stalking carnivores are still scarce. We show how the stalking predator Eurasian lynx (Lynx lynx selects prey individuals based on species identity, age, sex and individual behaviour. To address the difficulties in assessing prey population structure, we confirm inferred selection patterns by using two independent data sets: (1 data of 387 documented kills of radio-collared lynx were compared to the prey population structure retrieved from systematic camera trapping using Manly's standardized selection ratio alpha and (2 data on 120 radio-collared roe deer were analysed using a Cox proportional hazards model. Among the larger red deer prey, lynx selected against adult males-the largest and potentially most dangerous prey individuals. In roe deer lynx preyed selectively on males and did not select for a specific age class. Activity during high risk periods reduced the risk of falling victim to a lynx attack. Our results suggest that the stalking predator lynx actively selects for size, while prey behaviour induces selection by encounter and stalking success rates.

  18. Changes in cation concentrations in red spruce wood decayed by brown rot and white rot fungi

    Science.gov (United States)

    A. Ostrofsky; J. Jellison; K.T. Smith; W.C. Shortle

    1997-01-01

    Red spruce (Picea rubens Sarg.) wood blocks were incubated in modified soil block jars and inoculated with one of nine white rot or brown rot basidiomycetes. Concentrations of calcium, magnesium, potassium, iron, and aluminum were determined using inductively coupled plasma emission spectroscopy in wood incubated 0, 1.5, 4, and 8 months after...

  19. Perfect Undetectable Acoustic Device from Fabry-Pérot Resonances

    Science.gov (United States)

    Chen, Huanyang; Zhou, Yangyang; Zhou, Mengying; Xu, Lin; Liu, Qing Huo

    2018-02-01

    Transformation acoustics is a method to design novel acoustic devices, while the complexity of the material parameters hinders its progress. In this paper, we analytically present a three-dimensional perfect undetectable acoustic device from Fabry-Pérot resonances and confirm its functionality from Mie theory. Such a mechanism goes beyond the traditional transformation acoustics. In addition, such a reduced version can be realized by holey-structured metamaterials. Our theory paves a way to the implementation of three-dimensional transformation acoustic devices.

  20. Floral stalk on date palm: a new discovery

    Directory of Open Access Journals (Sweden)

    P. Kumar

    2014-12-01

    Full Text Available Date palm (Phoenix dactylifera L. is harvested for its sweet fruit mainly in the middle east and other parts of the world. It has been cultivated for several thousand years and is known to be found in Mesopotamia as well. Besides the fruit, the various parts of the tree are employed for variety of uses. The stalks of the fruit, which connect the fruit to the spikelet, are very beautiful, colourful flower like structures, which have never been described earlier. These fruit stalks could be used for decorations in houses and would then add to more economic gain to the farmer. We observed these stalks and describe here this interesting finding hitherto unreported in the world literature.

  1. Involvement of phenolic compounds in the susceptibility of bananas to crown rot. A review

    Directory of Open Access Journals (Sweden)

    Lassois, L.

    2012-01-01

    Full Text Available Crown rot of bananas, caused by a fungal parasitic complex, is one of the main quality defects of exported bananas. Major variations in the susceptibility of bananas to crown rot have been observed in different production zones. The physiological state of the banana fruit at harvest is said to influence its response to pathogenic attack and thus to modulate its susceptibility to crown rot. The susceptibility of bananas to this disease, however, appears to be influenced by many pre-harvest factors, although the underlying defense mechanisms have not been clearly identified. A recent report based on molecular analyses suggests that phenolic compounds might be involved in the different variations in the susceptibility of bananas to crown rot. Results of other earlier studies point to an involvement of phenolic compounds in the defensive reactions of banana plants against various pathogens. The present paper reviews the current state of knowledge on the variations in the susceptibility of bananas to crown rot and takes stock of what is known about phenolic compounds in relation to their potential involvement in the defense mechanisms of the banana plant.

  2. Foot Rot of Ulluco Caused by Pythium aphanidermatum

    OpenAIRE

    Keisuke, TOMIOKA; Toyozo, SATO; Tateo, NAKANISHI; National Agricultural Research Center for Western Region; National Institute of Agrobiological Sciences; National Agricultural Research Center for Western Region

    2002-01-01

    Severe rot of stem bases caused by Pythium aphanidermatum was found on ulluco (Ullucus tuberosus) grown in Kagawa Prefecture, Japan, in September 1999. The name "foot rot of ulluco" is proposed for this new disease.

  3. Hydrothermal carbonization of tobacco stalk for fuel application.

    Science.gov (United States)

    Cai, Jiaxiao; Li, Bin; Chen, Chaoying; Wang, Jing; Zhao, Min; Zhang, Ke

    2016-11-01

    Tobacco stalks are an abundant biomass resource which are otherwise treated as waste. In this work, the effect of hydrothermal carbonization temperature and time on the structures, chemical compositions and combustion characteristics of hydrochars obtained from tobacco stalks were evaluated. The carbon content, higher heating value, and energy yield increased with accompanying decrease in hydrogen and oxygen contents with the increase of treatment temperature and time. The evolution of the H/C and O/C atomic ratios indicated dehydration and devolatilization processes occurred during hydrothermal carbonization. The weight loss, combustion range and characteristic temperatures of tobacco stalks were significantly modified after hydrothermal carbonization, resulting in higher ignition temperatures and higher energy density. The kinetics model, Coats-Redfern method revealed the activation energy of hydrochars in zone 2 and 3 were among 43.7-74.8kJ/mol and 46.7-85.8kJ/mol, respectively. Our results show that hydrothermal carbonization reaction can facilitate transforming tobacco stalks into energy-rich solid fuel. Copyright © 2016. Published by Elsevier Ltd.

  4. Hyperprolactinemia associated to calcification of the pituitary stalk: case report

    Directory of Open Access Journals (Sweden)

    OLIVEIRA MIRIAM DA COSTA

    1998-01-01

    Full Text Available In this work, the authors report the case of a female patient with 24 years of age with hyperprolactinemia, who presented a pituitary stalk calcification as seen by CT scan. Once other possible etiologies were excluded, we concluded that the calcification was probably related to hyperprolactinemia caused by interruption of the input of dopamine to the pituitary gland.

  5. Enhanced ethanol production from stalk juice of sweet sorghum by ...

    African Journals Online (AJOL)

    Sweet sorghum (sugar sorghum, Sorghum bicolor) is one kind of non-grain energy crops. As a novel green regenerated high-energy crop with high utility value, high yield of biomass, the sweet sorghum is widely used and developed in China. Stalk juice of sweet sorghum was used as the main substrate for ethanol ...

  6. Stalking on Campus: Ensuring Security with Rights and Liberties

    Science.gov (United States)

    Campbell, Julie; Longo, Peter J.

    2010-01-01

    College campuses are often perceived as idyllic communities. While there is much truth in such perceptions, not surprisingly there are many complicated issues on college campuses. Stalking is one such problem that seems to persist and thrive in the cloistered college setting. Campus safety efforts must temper security practices with civil rights…

  7. Comparative study of root, stalk and leaf essential oils of ...

    African Journals Online (AJOL)

    The root, stalk and leaf essential oils of Cymbopogon citratus grown in Kaduna, North Central Nigeria were extracted separately by hydrodistillation and characterized by GC-MS. The chemical composition analysis by GC-MS of the oils allowed the identification of 34, 26 and 16 compounds respectively. In the three oils, the ...

  8. Deactivation of tannins in raisin stalk by polyethylene glycol-600 ...

    African Journals Online (AJOL)

    6000) and urea on dry and organic matter digestibility (IVDMD and IVOMD, respectively) and gas production in vitro. Raisin stalk contained 8.6% crude protein, 85% dry matter, 7% ash, 13.95% total extractable phenol (TEPH) and 2.13% total ...

  9. 77 FR 211 - National Stalking Awareness Month, 2012

    Science.gov (United States)

    2012-01-03

    ... Federal agencies, we are promoting new tools to decrease the incidence of domestic violence, sexual... and harmful behavior. This month, let us come together to prevent abuse, violence, and harassment in... our schools and in our neighborhoods, at home and in workplaces across our Nation, stalking endangers...

  10. Evaluation of cotton stalk hydrolysate for xylitol production.

    Science.gov (United States)

    Sapcı, Burcu; Akpinar, Ozlem; Bolukbasi, Ufuk; Yilmaz, Levent

    2016-07-03

    Cotton stalk is a widely distributed and abundant lignocellulosic waste found in Turkey. Because of its rich xylose content, it can be a promising source for the production of xylitol. Xylitol can be produced by chemical or biotechnological methods. Because the biotechnological method is a simple process with great substrate specificity and low energy requirements, it is more of an economic alternative for the xylitol production. This study aimed to use cotton stalk for the production of xylitol with Candida tropicalis Kuen 1022. For this purpose, the combined effects of different oxygen concentration, inoculum level and substrate concentration were investigated to obtain high xylitol yield and volumetric xylitol production rate. Candida tropicalis Kuen 1022 afforded different concentrations of xylitol depending on xylose concentration, inoculum level, and oxygen concentration. The optimum xylose, yeast concentration, and airflow rate for cotton stalk hydrolysate were found as 10.41 g L(-1), 0.99 g L(-1), and 1.02 vvm, respectively, and under these conditions, xylitol yield and volumetric xylitol production rate were obtained as 36% and 0.06 g L(-1) hr(-1), respectively. The results of this study show that cotton stalk can serve as a potential renewable source for the production of xylitol.

  11. 78 FR 1125 - National Stalking Awareness Month, 2013

    Science.gov (United States)

    2013-01-07

    .... It can include implied or explicit threats; harassment; or nonconsensual communication through phone... the cycle of abuse. In January 2012, we held the first-ever White House stalking roundtable with... from cyberstalking. Through our Apps Against Abuse challenge, my Administration recognized mobile...

  12. Two unusual causes of pituitary stalk thickening in children without clinical features of diabetes insipidus

    Energy Technology Data Exchange (ETDEWEB)

    Andronikou, Savvas; Furlan, Gisella; Fieggen, Anthony G.; Wilmshurst, Jo [Department of Paediatric Neuroradiology, University of Cape Town, Klipfontein Road, 7700, Rondebosch, Cape Town (South Africa); Cross War Memorial Children' s Hospital, University of Cape Town, Klipfontein Road, 7700, Rondebosch, Cape Town (South Africa); School of Child and Adolescent Health, University of Cape Town, Klipfontein Road, 7700, Rondebosch, Cape Town (South Africa)

    2003-07-01

    Pituitary stalk thickening has a wide differential diagnosis, but almost all infundibular diseases present with diabetes insipidus (DI). We present a child with metastatic involvement of the pituitary stalk from a primary pontine tumour and a child with tuberculous infiltration of the pituitary stalk and associated meningeal inflammation. Neither child presented with DI. Even though both metastatic disease and tuberculous infiltration of the stalk have been reported in adults, these are the first reports with accompanying cross-sectional images of pituitary stalk involvement by these diseases in children. (orig.)

  13. Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white-rot/brown-rot paradigm for wood decay fungi

    Science.gov (United States)

    Robert Riley; Asaf A. Salamov; Daren W. Brown; Laszlo G. Nagy; Dimitrios Floudas; Benjamin W. Held; Anthony Levasseur; Vincent Lombard; Emmanuelle Morin; Robert Otillar; Erika A. Lindquist; Hui Sun; Kurt M. LaButti; Jeremy Schmutz; Dina Jabbour; Hong Luo; Scott E. Baker; Antonio G. Pisabarro; Jonathan D. Walton; Robert A. Blanchette; Bernard Henrissat; Francis Martin; Daniel Cullen; David S. Hibbett; Igor V. Grigoriev

    2014-01-01

    Basidiomycota (basidiomycetes) make up 32% of the described fungi and include most wood-decaying species, as well as pathogens and mutualistic symbionts. Wood-decaying basidiomycetes have typically been classified as either white rot or brown rot, based on the ability (in white rot only) to degrade lignin along with cellulose and hemicellulose. Prior genomic...

  14. Response of the Andean diversity panel to root rot in a root rot nursery in Puerto Rico

    Science.gov (United States)

    The Andean Diversity Panel (ADP) was evaluated under low-fertility and root rot conditions in two trials conducted in 2013 and 2015 in Isabela, Puerto Rico. About 246 ADP lines were evaluated in the root rot nursery with root rot and stem diseases caused predominantly by Fusarium solani, which cause...

  15. Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white rot/brown rot paradigm for wood decay fungi

    Science.gov (United States)

    Basidiomycota (basidiomycetes) make up 32% of the described fungi and include most wood decaying species, as well as pathogens and mutualistic symbionts. Wood-decaying basidiomycetes have typically been classified as either white rot or brown rot, based on the ability (in white rot only) to degrade ...

  16. Interactions between cranberries and fungi: the proposed function of organic acids in virulence suppression of fruit rot fungi

    Directory of Open Access Journals (Sweden)

    Mariusz eTadych

    2015-08-01

    Full Text Available Cranberry fruit are a rich source of bioactive compounds that may function as constitutive or inducible barriers against rot-inducing fungi. The content and composition of these compounds change as the season progresses. Several necrotrophic fungi cause cranberry fruit rot disease complex. These fungi remain mostly asymptomatic until the fruit begins to mature in late August. Temporal fluctuations and quantitative differences in selected organic acid profiles between fruit of six cranberry genotypes during the growing season were observed. The concentration of benzoic acid in fruit increased while quinic acid decreased throughout fruit development. In general, more rot-resistant genotypes showed higher levels of benzoic acid early in fruit development and more gradual decline in quinic acid levels than that observed in the more rot-susceptible genotypes. We evaluated antifungal activities of selected cranberry constituents and found that most bioactive compounds either had no effects or stimulated growth or reactive oxygen species (ROS secretion of four tested cranberry fruit rot fungi, while benzoic acid and quinic acid reduced growth and suppressed secretion of ROS by these fungi. We propose that variation in the levels of ROS suppressive compounds, such as benzoic and quinic acids, may influence virulence by the fruit rot fungi. Selection for crops that maintain high levels of virulence suppressive compounds could yield new disease resistant varieties. This could represent a new strategy for control of disease caused by necrotrophic pathogens that exhibit a latent or endophytic phase.

  17. Intimate partner stalking victimization and posttraumatic stress symptoms in post-abuse women.

    Science.gov (United States)

    Fleming, Kimberly N; Newton, Tamara L; Fernandez-Botran, Rafael; Miller, James J; Ellison Burns, Vicki

    2012-12-01

    This study aimed to further understanding of intimate partner stalking victimization in post-abuse women, with particular attention to the definition of stalking (with or without fear and threat) most predictive of posttraumatic stress (PTS) symptoms. In community midlife women with histories of divorce (N = 192), a history of stalking victimization accompanied by fear and threat was positively correlated with PTS symptom severity, after accounting for other partner abuse. The presence, compared with absence, of fear-and-threat stalking history doubled the odds of symptomatic levels of hyperarousal. Greater physical assault and injury chronicity differentiated fear-and-threat stalked women from other stalked women. Stalking contributed to a fuller understanding of PTS symptoms in women, showing particular relevance for hyperarousal.

  18. Changes in Molecular Size Distribution of Cellulose during Attack by White Rot and Brown Rot Fungi

    OpenAIRE

    Kleman-Leyer, Karen; Agosin, Eduardo; Conner, Anthony H.; Kirk, T. Kent

    1992-01-01

    The kinetics of cotton cellulose depolymerization by the brown rot fungus Postia placenta and the white rot fungus Phanerochaete chrysosporium were investigated with solid-state cultures. The degree of polymerization (DP; the average number of glucosyl residues per cellulose molecule) of cellulose removed from soil-block cultures during degradation by P. placenta was first determined viscosimetrically. Changes in molecular size distribution of cellulose attacked by either fungus were then det...

  19. Studies on storage rot of cocoyam

    African Journals Online (AJOL)

    uc network

    Department of Botany, University of Nigeria, Nsukka, Nigeria, were employed for this study. These were fungal organisms which had earlier been established as the major rot pathogens of cocoyam corms during storage. Pathogenicity assessment studies of fungal organisms: To assess the potency of the fungal organisms.

  20. Etiology of phomopsis root rot in soybean

    Directory of Open Access Journals (Sweden)

    Valéria Cecília Ghissi

    2014-09-01

    Full Text Available In a survey of damages caused by soybean root rot to crops in the south of Brazil for several years, a root rot caused by Phomopsis sp has been found with increasing frequency. The primary symptoms are seen when the main root is cut longitudinally, including the death of the wood which shows white coloration and well-defined black lines that do not have a defined format. Thus, based on similarity, it has been called geographic root rot due to its aspect resembling irregular lines that separate regions on a map. In isolations, colonies and alpha spores of Phomopsis have prevailed. Pathogenicity test was done by means of inoculation in the crown of plants cultivated in a growth chamber. The geographic symptoms were reproduced in plants and the fungus Phomopsis sp. was reisolated. In soybean stems naturally infected with pod and stem blight, geographic symptoms caused by Phomopsis phaseoli are found. To the known symptoms on stems, pods and grains, that of root rot caused by P. phaseoli is now added.

  1. Laminated Root Rot of Western Conifers

    Science.gov (United States)

    E.E. Nelson; N.E. Martin; R.E. Williams

    1981-01-01

    Laminated root rot is caused by the native fungus Phellinus weirii (Murr.) Gilb. It occurs throughout the Northwestern United States and in southern British Columbia, Canada. The disease has also been reported in Japan and Manchuria. In the United States, the pathogen is most destructive in pure Douglas-fir stands west of the crest of the Cascade Range in Washington...

  2. Postharvest Rhizopus rot on sugar beet

    Science.gov (United States)

    Rhizopus species have been reported as a minor post-harvest rot on sugar beet, particularly under temperatures above 5 deg C. In 2010, Rhizopus was isolated from beets collected from Michigan storage piles in February at a low frequency. However, recent evidence from Michigan has found a high incide...

  3. Phenolic Compounds Analysis of Root, Stalk, and Leaves of Nettle

    Directory of Open Access Journals (Sweden)

    Semih Otles

    2012-01-01

    Full Text Available Types of nettles (Urtica dioica were collected from different regions to analyze phenolic compounds in this research. Nettles are specially grown in the coastal part. According to this kind of properties, nettle samples were collected from coastal part of (Mediterranean, Aegean, Black sea, and Marmara Turkey. Phenolic profile, total phenol compounds, and antioxidant activities of nettle samples were analyzed. Nettles were separated to the part of root, stalk, and leaves. Then, these parts of nettle were analyzed to understand the difference of phenolic compounds and amount of them. Nettle (root, stalk and leaves samples were analyzed by using High-Performance Liquid Chromatography with Diode-Array Detection (HPLC-DAD to qualitative and quantitative determination of the phenolic compounds. Total phenolic components were measured by using Folin-Ciocalteu method. The antioxidant activity was measured by using DPPH (2,2-diphenyl-1-picrylhydrazyl which is generally used for herbal samples and based on single electron transfer (SET.

  4. Ultrasonically assisted antioxidant extraction from grape stalks and olive leaves

    Science.gov (United States)

    Cárcel, Juan A.; García-Pérez, José V.; Mulet, Antonio; Rodríguez, Ligia; Riera, Enrique

    2010-01-01

    Grape stalks and olive leaves present high amount of phenolic compounds with antioxidant properties. The extraction of these compounds may be considered a way to increase in value both agro-food by-products. Ultrasound is widely applied in extraction due to its effects (cavitation, microstirring or sponge effect) over the process. The goal of this work was to address the application of ultrasound on the antioxidant extraction of olive leaves and grape stalk. For that purpose, the extraction of antioxidant compounds from grape stalks and olive leaves, previously dried at 100 °C, were carried out using a ethanolic solution (80 % v/v) at 60 °C. Extractions were carried out with (US; 30 kHz; 600W)) and agitation (AG) without ultrasound application. In the AG experiments, the solution was agitated with a stirrer. Samples were obtained at different extraction time (10, 30, 60, 120, 180, 240, 360, 480 and 1440 min) and their antioxidant capacity was measured using FRAP method. The Naik model was used to model the extraction kinetics, being identified the antioxidant capacity of extracts at the equilibrium (Y eq) and the initial velocity of extraction (Y eq/B). For grape stalks, the antioxidant capacity of extracts at the equilibrium (Y eq) and the initial velocity of extraction (Y eq/B) were higher in AG experiments than in US experiments. In the olive leaves extractions, the Y eq/B was of the same order for both treatments but Y eq was significantly higher for US experiments. The different influence of ultrasound for both by-products can be explained from their different geometry and structure.

  5. Phenolic Compounds Analysis of Root, Stalk, and Leaves of Nettle

    OpenAIRE

    Otles, Semih; Yalcin, Buket

    2012-01-01

    Types of nettles (Urtica dioica) were collected from different regions to analyze phenolic compounds in this research. Nettles are specially grown in the coastal part. According to this kind of properties, nettle samples were collected from coastal part of (Mediterranean, Aegean, Black sea, and Marmara) Turkey. Phenolic profile, total phenol compounds, and antioxidant activities of nettle samples were analyzed. Nettles were separated to the part of root, stalk, and leaves. Then, these parts ...

  6. Cathode Stalk Cooling System for the MK 1 Quarterwave Gun

    Science.gov (United States)

    2012-06-01

    that is a copper hollow tube (very similar to the cathode stalk), which can also be moved longitudinally to manipulate the coupling into the cavity...subtraction was used to determine these results in Photoshop by layering the two images and taking the difference. This is with a resolution of about 2.8... photo injectors,” Proceedings of the 2009 Superconducting RF Conference, Berlin, Germany, Rep. MOOBAU03, 2009. [11] S. P. Niles et al., “NPS prototype

  7. Properties and potential applications of natural cellulose fibers from the bark of cotton stalks.

    Science.gov (United States)

    Reddy, Narendra; Yang, Yiqi

    2009-07-01

    Natural cellulose fibers have been obtained from the bark of cotton stalks and the fibers have been used to develop composites. Cotton stalks are rich in cellulose and account for up to 3 times the quantity of cotton fiber produced per acre. Currently, cotton stalks have limited use and are mostly burned on the ground. Natural cellulose fibers obtained from cotton stalks are composed of approximately 79% cellulose and 13.7% lignin. The fibers have breaking tenacity of 2.9 g per denier and breaking elongation of 3% and modulus of 144 g per denier, between that of cotton and linen. Polypropylene composites reinforced with cotton stalk fibers have flexural, tensile and impact resistance properties similar to jute fiber reinforced polypropylene composites. Utilizing cotton stalks as a source for natural cellulose fibers provides an opportunity to increase the income from cotton crops and make cotton crops more competitive to the biofuel crops.

  8. The consequences of coping with stalking-results from the first qualitative study on stalking in Denmark.

    Science.gov (United States)

    Johansen, Katrine Bindesbøl Holm; Tjørnhøj-Thomsen, Tine

    2016-11-01

    The purpose of this article is to explore: (1) how victims of stalking experience the phenomenon in their daily life, (2) how the nature of stalking informs the victim's internal coping strategies, and (3) how the victims' internal coping strategies negatively affect their daily life and well-being. Qualitative semi-structured interviews were conducted with 25 victims of stalking. Thematic content analysis was employed, and themes were primarily identified inductively and broad into dialogue with concepts, such as Foucault's panopticism. The results of the study indicate that rather than the stalkers' harassment itself; it is the unpredictability of the stalkers' potential actions that inform the victims' primary coping strategy-self-regulation. Self-regulation consists of various strategies victims employ to avoid the stalker. Our analysis shows that self-regulation as a coping strategy has social and psychological consequences for the victims, leading to various degrees of social isolation and apprehension. We conclude that it is necessary to consider how professionals advise victims to cope with their situation as how legal measures should focus on the security of victims.

  9. Isolation of laccase gene-specific sequences from white rot and brown rot fungi by PCR

    Energy Technology Data Exchange (ETDEWEB)

    D`Souza, T.M.; Boominathan, K.; Reddy, C.A. [Michigan State Univ., East Lansing, MI (United States)

    1996-10-01

    Degenerate primers corresponding to the consensus sequences of the copper-binding regions in the N-terminal domains of known basidiomycete laccases were used to isolate laccase gene-specific sequences from strains representing nine genera of wood rot fungi. All except three gave the expected PCR product of about 200 bp. Computer searches of the databases identified the sequences of each of the PCR product of about 200 bp. Computer searches of the databases identified the sequence of each of the PCR products analyzed as a laccase gene sequence, suggesting the specificity of the primers. PCR products of the white rot fungi Ganoderma lucidum, Phlebia brevispora, and Trametes versicolor showed 65 to 74% nucleotide sequence similarity to each other; the similarity in deduced amino acid sequences was 83 to 91%. The PCR products of Lentinula edodes and Lentinus tigrinus, on the other hand, showed relatively low nucleotide and amino acid similarities (58 to 64 and 62 to 81%, respectively); however, these similarities were still much higher than when compared with the corresponding regions in the laccases of the ascomycete fungi Aspergillus nidulans and Neurospora crassa. A few of the white rot fungi, as well as Gloeophyllum trabeum, a brown rot fungus, gave a 144-bp PCR fragment which had a nucleotide sequence similarity of 60 to 71%. Demonstration of laccase activity in G. trabeum and several other brown rot fungi was of particular interest because these organisms were not previously shown to produce laccases. 36 refs., 6 figs., 2 tabs.

  10. MANAGEMENT OF ROOT ROT IN AVOCADO TREES

    Directory of Open Access Journals (Sweden)

    SIMONE RODRIGUES DA SILVA

    Full Text Available ABSTRACT Root rot (Phytophthora cinnamomi Rands is one of the most restrictive factors to avocado growing in main producing regions worldwide. In Brazil, scientific reports on the effectiveness of control methods are scarce. The objective of this study was to evaluate the efficiency of gypsum applications and dolomitic limestone to the soil and potassium phosphite sprays in controlling this disease in ‘Hass’ avocado, grown without irrigation. The application of dolomitic limestone or gypsum alone is not effective to recover plants affected by root rot. The application of potassium phosphite, combined or not with dolomitic lime or gypsum enables the partial recovery ‘Hass’ avocado plants affected by the disease.

  11. MANAGEMENT OF ROOT ROT IN AVOCADO TREES

    OpenAIRE

    SILVA, SIMONE RODRIGUES DA; CANTUARIAS-AVILÉS, TATIANA; BREMER NETO, HORST; MOURÃO FILHO, FRANCISCO DE ASSIS ALVES; MEDINA, RICARDO BORDIGNON

    2016-01-01

    ABSTRACT Root rot (Phytophthora cinnamomi Rands) is one of the most restrictive factors to avocado growing in main producing regions worldwide. In Brazil, scientific reports on the effectiveness of control methods are scarce. The objective of this study was to evaluate the efficiency of gypsum applications and dolomitic limestone to the soil and potassium phosphite sprays in controlling this disease in ‘Hass’ avocado, grown without irrigation. The application of dolomitic limestone or gypsum...

  12. Sheath rot of rice in Iran.

    Science.gov (United States)

    Naeimi, S; Okhovvat, S M; Hedjaroude, G A; Khosravi, V

    2003-01-01

    Sheath rot of rice occurs in most rice-growing regions of the world. It usually causes yield losses from 20 to 85%. Sheath rot was reported from Iran in 1993. Year after year, the number of diseased plants increased in the Northern Iran. In summer of 2001, these symptoms were observed in most fields: lesions occur on the upper leaf sheaths, especially the flag leaf sheath. As the disease progresses, lesions enlarge and coalesce and may cover most of the leaf sheath. Panicle may fail to completely or at all. Brown or partially brown not filled or partially filled grain is also associated with infection of the panicle. A whitish powdery growth may be found inside affected sheaths. Infected plants were collected and trasferred to laboratory. Small pieces of diseased tissues were washed under tap water for one hour. Then tissues were placed on WA and incubated at 25 degrees C. These isolates were purified and identified as: Sarocladium oryzae, Fusarium udum, F. semitectum, F. avenaceum, F. flocciferum, F. graminearum, Bipolaris oryzae, Alternaria padwickii, Rhizoctonia solani, Paecilomyces sp., Nigrospora sp. and Trichoderma sp. This is the first report of F. udum in Iran. Also this is the first report that rice is the host for F. semitectum, F. avenaceum and F. flocciferum in Iran. Pathogenicity tests were conducted in glass house. Following species were found to be associated with sheath rot of rice: S. oryzae, F. graminearum, F. udum, F. avenaceum, B. oryzae, A. padwickii. This is the first report in the world that F. udum and A. padwickii are the causal agents of the sheath rot on rice plants.

  13. Stand tending and root rot in Norway spruce stands - economical effects caused by root rot at different thinning regimes

    International Nuclear Information System (INIS)

    Johansson, Mats

    1997-01-01

    This report is divided into three parts: 1) a literature study describing the most common fungi causing rot in wood and descriptions of various strategies to reduce economic loss from root rot, 2) a check of a model describing the development of butt rot in pure Norway spruce plantations in southern Sweden, and 3) simulated economic effects of root rot in stands with various stand tending. The rot model was used to estimate future rot frequencies in the economic calculations. In order to avoid overestimations of rot frequencies, the calculations were also executed when assuming slower growth of rot than shown in the model. When analysing the economical effects of rot, the following three thinning programmes were used: Program 1: thinning at the ages of 30- and 45 years. Final felling at the ages 50-, 55-, 60-, 65-, and 70 years. Program 2: thinning at the ages of 40- and 60- years. Final felling at the ages 65 and 75 years. Program 3: thinning at the ages of 30-, 40-, 55-, and 70 years. Final felling at the ages 80 and 90 years. With an interest rate of 3%, programme 2 (final felling at the age of 65 years) had the highest value at present. This result was valid when presuming butt rot in the stand as well as when presuming no butt rot in the stand. There was a small difference between the value at present in programme 1 (final felling at the age of 60 years) and in programme 3 (final felling at the age of 80 years). When presuming butt rot in the stand, the value at present in programme 3 decreased somewhat more in comparison to the value at present in programme 1. Compared to no butt rot in the stand, the optimal final felling time appeared five to ten years earlier when assuming butt rot in the stand. Stand tending programme 1 and an interest rate of 3% were used. Interest rates 2 and 4% did not indicate shorter rotation. The calculated optimal time of final felling appeared at the same stand age whether assuming rot preset or not. The results in this study

  14. Hemagglutinin Stalk Immunity Reduces Influenza Virus Replication and Transmission in Ferrets.

    Science.gov (United States)

    Nachbagauer, Raffael; Miller, Matthew S; Hai, Rong; Ryder, Alex B; Rose, John K; Palese, Peter; García-Sastre, Adolfo; Krammer, Florian; Albrecht, Randy A

    2015-12-30

    We assessed whether influenza virus hemagglutinin stalk-based immunity protects ferrets against aerosol-transmitted H1N1 influenza virus infection. Immunization of ferrets by a universal influenza virus vaccine strategy based on viral vectors expressing chimeric hemagglutinin constructs induced stalk-specific antibody responses. Stalk-immunized ferrets were cohoused with H1N1-infected ferrets under conditions that permitted virus transmission. Hemagglutinin stalk-immunized ferrets had lower viral titers and delayed or no virus replication at all following natural exposure to influenza virus. Copyright © 2016, American Society for Microbiology. All Rights Reserved.

  15. Yield survey and nutritional evaluation of garlic stalk for ruminant feed.

    Science.gov (United States)

    Lee, Y H; Kim, Y I; Oh, Y K; Ahmadi, F; Kwak, W S

    2017-01-01

    Very limited information exists on the ruminal degradation kinetics of nutrients in garlic stalk. The present study aimed to survey the annual yield of garlic stalk in Korea and determine its feed-nutritive value for ruminants. In Experiment 1, garlic stalk was incubated in situ in the rumen of two Hanwoo steers (360 ± 15 kg body weight) and removed after 12, 24, or 48 h to determine the ruminal degradation kinetics of DM and NDF. Rice straw was also included for comparison. In Experiment 2, In Experiment 2, six male Corriedale sheep were randomized to two dietary treatments to determine the apparent digestibility of nutrients in garlic stalk. Diets included a control ration without garlic stalk (60% concentrate mix +40% ryegrass) or a treatment ration (70% control diet +30% garlic stalk). The Korean national yield of garlic stalk (sun-dried basis) in 2016 was estimated to be 31,910 tons, with the southern coastal regions producing the highest quantity. Compared with rice straw, garlic stalk had lower NDF, higher ADF, and greater effective degradabilities of DM and NDF, resulting in a greater TDN value (56.3%), which was higher than that obtained for rice straw (43.7%). These results provide basic information on the ruminal DM and NDF degradation kinetics of garlic stalk, which would be helpful for the efficient utilization of this by-product in ruminant diets.

  16. Yield survey and nutritional evaluation of garlic stalk for ruminant feed

    Directory of Open Access Journals (Sweden)

    Y. H. Lee

    2017-10-01

    Full Text Available Abstract Background Very limited information exists on the ruminal degradation kinetics of nutrients in garlic stalk. The present study aimed to survey the annual yield of garlic stalk in Korea and determine its feed-nutritive value for ruminants. Methods In Experiment 1, garlic stalk was incubated in situ in the rumen of two Hanwoo steers (360 ± 15 kg body weight and removed after 12, 24, or 48 h to determine the ruminal degradation kinetics of DM and NDF. Rice straw was also included for comparison. In Experiment 2, In Experiment 2, six male Corriedale sheep were randomized to two dietary treatments to determine the apparent digestibility of nutrients in garlic stalk. Diets included a control ration without garlic stalk (60% concentrate mix +40% ryegrass or a treatment ration (70% control diet +30% garlic stalk. Results The Korean national yield of garlic stalk (sun-dried basis in 2016 was estimated to be 31,910 tons, with the southern coastal regions producing the highest quantity. Compared with rice straw, garlic stalk had lower NDF, higher ADF, and greater effective degradabilities of DM and NDF, resulting in a greater TDN value (56.3%, which was higher than that obtained for rice straw (43.7%. Conclusion These results provide basic information on the ruminal DM and NDF degradation kinetics of garlic stalk, which would be helpful for the efficient utilization of this by-product in ruminant diets.

  17. Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white rot/ brown rot paradigm for wood decay fungi

    Energy Technology Data Exchange (ETDEWEB)

    Riley, Robert; Salamov, Asaf; Brown, Daren W.; Nagy, Laszlo G.; Floudas, Dimitris; Held, Benjamin; Levasseur, Anthony; Lombard, Vincent; Morin, Emmanuelle; Otillar, Robert; Lindquist, Erika; Sun, Hui; LaButti, Kurt; Schmutz, Jeremy; Jabbour, Dina; Luo, Hong; Baker, Scott E.; Pisabarro, Antonio; Walton, Jonathan D.; Blanchette, Robert; Henrissat, Bernard; Martin, Francis; Cullen, Dan; Hibbett, David; Grigoriev, Igor V.

    2014-03-14

    Basidiomycota (basidiomycetes) make up 32percent of the described fungi and include most wood decaying species, as well as pathogens and mutualistic symbionts. Wood-decaying basidiomycetes have typically been classified as either white rot or brown rot, based on the ability (in white rot only) to degrade lignin along with cellulose and hemicellulose. Prior genomic comparisons suggested that the two decay modes can be distinguished based on the presence or absence of ligninolytic class II peroxidases (PODs), as well as the abundance of enzymes acting directly on crystalline cellulose (reduced in brown rot). To assess the generality of the white rot/brown rot classification paradigm we compared the genomes of 33 basidiomycetes, including four newly sequenced wood decayers, and performed phylogenetically-informed Principal Components Analysis (PCA) of a broad range of gene families encoding plant biomass-degrading enzymes. The newly sequenced Botryobasidium botryosum and Jaapia argillacea genomes lack PODs, but possess diverse enzymes acting on crystalline cellulose, and they group close to the model white rot species Phanerochaete chrysosporium in the PCA. Furthermore, laboratory assays showed that both B. botryosum and J. argillacea can degrade all polymeric components of woody plant cell walls, a characteristic of white rot. We also found expansions in reducing polyketide synthase genes specific to the brown rot fungi. Our results suggest a continuum rather than a dichotomy between the white rot and brown rot modes of wood decay. A more nuanced categorization of rot types is needed, based on an improved understanding of the genomics and biochemistry of wood decay.

  18. Bioenergy production from sweet sorghum stalks via a biorefinery perspective.

    Science.gov (United States)

    Nozari, Behzad; Mirmohamadsadeghi, Safoora; Karimi, Keikhosro

    2018-04-01

    Besides free sugars, sweet sorghum stalks contain cellulose and hemicellulose that can be used for biofuel production. The pretreatment of stalks without the extraction of free sugars is more complicated than typical lignocelluloses, because of the degradation of free sugars during most pretreatment processes. In this study, the bioconversion of sweet sorghum stalks into biogas and bioethanol was studied using an improved organosolv pretreatment within a biorefinery framework. The organosolv pretreatment was developed using an aqueous solution of ethanol (EtOH) and isopropanol (IPOH). The process was optimized to obtain a liquor containing free sugars with the least sugar degradations together with a highly degradable solid fraction. The liquor was subjected to anaerobic digestion for biomethane production, while the solid was used for ethanol production via simultaneous saccharification and fermentation (SSF). The most influencing pretreatment parameters, i.e., temperature, time, alcohol to water ratio, EtOH to IPOH ratio, and the presence or absence of sulfuric acid (as a catalyst), were adjusted to achieve the highest yields of bioconversion. The maximum methane and ethanol production yields of 271.2 mL CH 4 /g VS and 87.8% (equal to the gasoline equivalent of 0.170 and 0.241 L/kg, respectively) were achieved from the liquor and pretreated solid, respectively; however, they were obtained at different optimum conditions. Considering the biorefinery perspective, the highest gasoline equivalent of 0.249 L/kg was efficiently obtained from the whole process after pretreatment at 140 °C for 30 min using 60:20 EtOH/IPOH ratio in the presence of 1% sulfuric acid. Further analyses, including enzymatic adsorption/desorption, compositional analysis, FTIR, and SEM, were conducted to investigate the effects of this newly developed pretreatment on the substrate.

  19. Genetic bases of fungal white rot wood decay predicted by phylogenomic analysis of correlated gene-phenotype evolution

    Science.gov (United States)

    László G. Nagy; Robert Riley; Philip J. Bergmann; Krisztina Krizsán; Francis M. Martin; Igor V. Grigoriev; Dan Cullen; David S. Hibbett

    2016-01-01

    Fungal decomposition of plant cell walls (PCW) is a complex process that has diverse industrial applications and huge impacts on the carbon cycle. White rot (WR) is a powerful mode of PCW decay in which lignin and carbohydrates are both degraded. Mechanistic studies of decay coupled with comparative genomic analyses have provided clues to the enzymatic components of WR...

  20. Victims of stalking in India: A study of girl college students in Tirunelveli City

    Directory of Open Access Journals (Sweden)

    Jaishankar Karuppannan

    2007-01-01

    Full Text Available The word 'stalking' was not commonly known in India, until Priyadharshini Mattoo's case (1996 hit the headlines. Eve teasing, a colloquial word for gender harassment is popularly known and Tamil Nadu Prohibition of Eve-Teasing Act, 1998 on that was developed after the brutal killing of a girl named Sarika Shah in Chennai. Though, stalking is there in the past, it was not acknowledged with this terminology and it was always merged with Eve teasing. On the other hand, stalking is much graver than Eve teasing and it is an obsessive behaviour. After the Matoo's case, the Indian Criminal Justice System awoke and the National Commission for Women is ready with a draft Bill (Sexual Assault Prevention Bill to make the Indian Penal Code more effective against the menace of stalkers. Research studies related to stalking in India are sparse and there is a need to study this phenomenon in depth. This paper presents some results from a study of stalking victims among Girl College students at Tirunelveli City, Tamil Nadu, India. In-depth questionnaire data are drawn on to investigate the course and nature of prolonged stalking in 150 self-defined victims. Findings indicate a pattern of repeated intrusions, the stalking harassment methods, lack of reporting behaviour, and effects of stalking on the victims.

  1. Radiation-induced grafting of sweet sorghum stalk for copper(II) removal from aqueous solution

    International Nuclear Information System (INIS)

    Dong, Jing; Hu, Jun; Wang, Jianlong

    2013-01-01

    Highlights: • Radiation-induced grafting was used to modify the stalk. • Cellulose, hemicellulose and lignin participated in grafting reaction. • Both the structure and composition of stalk had influence on grafting. • The sorption capacity of the grafted stalk increased about five times. -- Abstract: The influence of main components (cellulose, hemicellulose and lignin) of the sweet sorghum stalk on radiation-induced grafting reaction and adsorption of copper from aqueous solution was investigated. Sweet sorghum stalk was grafted with acrylic acid induced by γ-irradiation. The results showed that the grafted stalk contained 1.6 mmol/g carboxyl groups, and its maximal adsorption capacity was 13.32 mg/g. The cellulose, hemicellulose and lignin of the raw materials were confirmed to involve in grafting reaction through comparing the grafting yield and the structure of the grafted materials. Both the structure and the composition of the sweet sorghum stalk had influence on the grafting reaction and adsorption capacity. The adsorption capacity of the grafted sweet sorghum stalk increased about five times, and the adsorption isotherm of the grafted materials conformed to the Langmuir model. The main mechanism for copper adsorption involved in ion exchange

  2. Study of Nutrient Content Variation in Bulb And Stalk of Onions ...

    African Journals Online (AJOL)

    acer

    element concentration in the bulbs was in the order Ca>Mg>K>P>Na while that of the stalks was. Mg>Ca>K>P>Na. ... Yahaya et al.; Study of Nutrient Content Variation in Bulb And Stalk of Onions (Allium Sepa) Cultivated in Aliero, Aliero, Kebbi State,. Nigeria. 84 ... and acetic acid mixture to reduce oxidation of ascorbic acid ...

  3. Stalking Victimization among College Women and Subsequent Help-Seeking Behaviors

    Science.gov (United States)

    Buhi, Eric R.; Clayton, Heather; Surrency, Heather Hepler

    2009-01-01

    Objective: The authors examined the incidence of stalking victimization and subsequent help-seeking behaviors among college women. Participants and Methods: A stratified random sample of college women (N = 391) completed an anonymous Internet-based questionnaire in spring 2006. Results: One-fifth of women reported stalking victimization while…

  4. Body stalk anomaly in Denmark during 20 years (1970-1989)

    DEFF Research Database (Denmark)

    Bugge, Merete

    2012-01-01

    Body stalk anomaly is a severe defect of the abdominal wall with uncovered thoracic and/or abdominal organs. The umbilical cord is absent or very short. Here I present epidemiological and clinical data on 16 infants with body stalk anomaly. The 16 infants represent 3.4% of the 469 infants...

  5. Utilization of bio-waste cotton ( Gossypium hirsutum L.) stalks and ...

    African Journals Online (AJOL)

    The highest mechanical properties were obtained at cotton stalk and paulownia wood particle loading of 50 and 70%, respectively. Conclusively, valuable underutilized natural resources, cotton stalk and paulownia wood can be used with the mixture of industrial wood particles in the production of particleboards with high ...

  6. A comparison of soda and soda-AQ pulps from cotton stalks | Akgül ...

    African Journals Online (AJOL)

    In this study, cotton stalks (Gossypium hirsutum L.) were cooked using soda and soda-anthraquinone (AQ) process. Nine soda cooks were conducted by changing cooking conditions including active alkali charge and pulping time. Soda-AQ cooks were obtained by adding 0.075, 0.10, 0.15, 0.2% AQ (based on o.d stalks) to ...

  7. Improvement of resistance to Fusarium root rot through gene ...

    African Journals Online (AJOL)

    Fusarium root rot (FRR), caused by Fusarium solani f.sp. , is one of the most serious root rot diseases of common bean (Phaseolus vulgaris L.) throughout the world. Yield losses of up to 84% have been attributed to the disease. Development and deployment of resistant materials is the most feasible approach to managing ...

  8. ( Azadirachta Indica ) Leaf Extracts on the Rot Fungus ( Fusarium ...

    African Journals Online (AJOL)

    The storage lifespan of kola nuts is challenged by the problem of decay of nuts in storage as a result of the attack by the rot fungus (Fusarium spp). The effect of the neem leaf (Azadirachta indica) extracts on the rot fungus was investigated in order to aid extended kola nuts storage. The aqueous and ethanolic leaf extracts of ...

  9. Resistance to charcoal rot identified in ancestral soybean germplasm

    Science.gov (United States)

    Charcoal rot, caused by the fungal pathogen Macrophomina phaseolina, is an economically important disease on soybean and other crops including maize, sorghum, and sunflowers. Without effective cultural or chemical options to control charcoal rot in soybean, finding sources of genetic resistance is o...

  10. RESISTANCE TO POST-HARVEST MICROBIAL ROT IN YAM ...

    African Journals Online (AJOL)

    ACSS

    Rot from microbial infection of healthy yam tubers reduces their table quality and renders them unappealing to consumers. A study was carried out at Bimbilla in the Nanumba North District of Ghana to evaluate possible interactions of yam genotypes and storage methods for controlling internal rot in yam. Four local varieties.

  11. Cellulose Nanocrystals (CNCs from Corn Stalk: Activation Energy Analysis

    Directory of Open Access Journals (Sweden)

    Siwei Huang

    2017-01-01

    Full Text Available Cellulose nanocrystals (CNCs were isolated from corn stalk using sulfuric acid hydrolysis, and their morphology, chemical structure, and thermal stability properties were characterized. The CNCs had an average length of 120.2 ± 61.3 nm and diameter of 6.4 ± 3.1 nm (L/D = 18.7. The degree of crystallinity of the CNCs increased to 69.20% from the 33.20% crystallinity of raw corn stalk fiber, while the chemical structure was well kept after sulfuric acid hydrolysis. Thermal stability analysis showed that the degradation temperature of the CNCs reached 239.5 °C, which was higher than that of the raw fiber but lower than that of the extracted cellulose. The average activation energy values for the CNCs, evaluated using the Friedman, Flynn-Wall-Ozawa (F-W-O and Coats-Redfern methods, were 312.6, 302.8, and 309 kJ·mol−1 in the conversion range of 0.1 to 0.8. The isolated CNCs had higher values of activation energy than did the purified cellulose, which was attributed to the stronger hydrogen bonds present in the crystalline domains of CNCs than in those of cellulose. These findings can help better understand the thermal properties of polymer/CNC composites.

  12. Stalk cell differentiation without polyketides in the cellular slime mold.

    Science.gov (United States)

    Sato, Yukie G; Suarez, Teresa; Saito, Tamao

    2016-07-01

    Polyketides induce prestalk cell differentiation in Dictyostelium. In the double-knockout mutant of the SteelyA and B polyketide synthases, most of the pstA cells-the major part of the prestalk cells-are lost, and we show by whole mount in situ hybridization that expression of prestalk genes is also reduced. Treatment of the double-knockout mutant with the PKS inhibitor cerulenin gave a further reduction, but some pstA cells still remained in the tip region, suggesting the existence of a polyketide-independent subtype of pstA cells. The double-knockout mutant and cerulenin-treated parental Ax2 cells form fruiting bodies with fragile, single-cell layered stalks after cerulenin treatment. Our results indicate that most pstA cells are induced by polyketides, but the pstA cells at the very tip of the slug are induced in some other way. In addition, a fruiting body with a single-cell layered, vacuolated stalk can form without polyketides.

  13. Intimate partner stalking and femicide: urgent implications for women's safety.

    Science.gov (United States)

    McFarlane, Judith; Campbell, Jacquelyn C; Watson, Kathy

    2002-01-01

    This study describes the type and extent of intimate partner stalking and threatening behaviors that occurred within 12 months prior to a major assault or attempted or actual partner femicide and specifies which behaviors were associated with an increased risk of potential or actual lethality. The design was a ten-city case-control study of 821 women: 384 abuse victims and 437 attempted or actual femicide informants. Data were derived using a 16-item inventory. Logistic regressions, with adjustments for demographic variables, were used to identify the significant perpetrator behaviors associated with attempted/actual femicide. Women who reported the perpetrator followed or spied on them were more than twice as likely t o become attempted/actual femicide victims. Threats by the perpetrator to harm the children if the woman left or did not return to the relationship place the woman at a ninefold increase in the risk of attempted/actual femicide. Conclusions are that certain stalking and threatening behaviors are strong risk factors for lethality, and women must be so advised.

  14. Pituitary stalk interruption syndrome: cause, clinical manifestations, diagnosis, and management.

    Science.gov (United States)

    Voutetakis, Antonis; Sertedaki, Amalia; Dacou-Voutetakis, Catherine

    2016-08-01

    Pituitary stalk interruption syndrome (PSIS) is characterized by a thin or absent pituitary stalk, hypoplasia of the adenohypophysis, and ectopic neurohypophysis. PSIS manifestations include a wide spectrum of clinical phenotypes and pituitary hormone deficiencies of variable degree and timing of onset. In this review, recent advances with respect to the cause of PSIS, clinical characteristics leading to earlier diagnosis, and management are outlined. Diagnosis of PSIS is often delayed probably because clinical findings such as neonatal hypoglycemia, cholestasis, and/or micropenis as well as decreasing growth velocity are not appropriately and timely validated. Recently, molecular defects in various genes have been associated with PSIS albeit in a small number of cases. These findings suggest that PSIS belongs to the spectrum of holoprosencephaly-related defects. Phenotype-genotype discordance and the existence of asymptomatic carriers of a given molecular aberration indicate that penetrance may be modified favorably or unfavorably by the presence of other genetic and/or environmental factors. PSIS constitutes an antenatal anatomical defect. Neonatal hypoglycemia, cholestasis, and/or micropenis with or without growth deficit should raise the possibility of combined pituitary hormone deficiency, a life-threatening condition in cases of coexisting cortisol deficiency. It is important to search for molecular defects in all PSIS cases, as precise identification of the cause is a prerequisite for genetic counseling.

  15. Impact of management strategies in the basal rot, charcoal rots epidemiology and Phaseolus vulgaris L. yield.

    Directory of Open Access Journals (Sweden)

    Ulacio Osorio Dilcia

    2013-02-01

    Full Text Available The effect of chemical, physical, biologycal and cultural strategies individually or combinated were evaluated in the epidemiology of the basal rot (Sclerotium rolfsii, charcoal rot (Macrophomina phaseolina and the Phaseolus vulgaris cv Tacarigua yield at Barinas state from Venezuela. In the experiment, Tebuconazole (Teb was applicated at seed (1 L/Ton and at soil, a los 30 y 60 days after of the sow (1 L/ha; Trichoderma harzianum (Tri was applicated at seed (15 g for each 1.5 k and to 15, 30, 45 y 60 days after of the sow (30 g/10 L of water. On the other hand, soil was solarizated (Sol during 15 days and calcium nitrate (Ca (60 g/10 L of water was applicated each 15 days until 60 days of growth of cultivated plants. Basal rot was registered as far as 42 days after of the sow, showing less of 5.3% in Teb y the combination SolTeb. The hightest incidence of this disease was observed in the treatment Tri with 28.5%, being highter that control (14.5%. Last to 42 days predominated the charcoal rot in the rest of the plants for a total of 100% of incidente in everything the treatments. Nevertheless, Teb showed the hightest yield with 555 k/ha, being different estatistically at treatment TriCa, which showed the lowest yield with 31 k/ha, however, the roots not formed nodules nitrogen uptake in these replications with the fungicide and Ca. It is concluded that S. rolfsii was sensible at action of some of the treatments; but not M. phaseolina; nevertheless, the plants were capables to produce seeds health apparently in treatments in which observed less severity of charcoal rot.

  16. Diagnostic of dry rot in living trees

    International Nuclear Information System (INIS)

    Schaetzler, H.P.

    1978-01-01

    The γ-desorption method has been used in the early diagnosis of dry rot in trees. The attenuation of a 60 keV γ-beam ( 241 Am) has been measured on eleven healthy spruce disks. It is seen that early diagnostic of rotten trees is limited by natural density variation of the wood itself, but for a 95% confidence level that the wood is diseased, a tree must have an average of less than 0.59 g./cm 3 . (Auth/C.F.)

  17. Medical Council of India : the rot within.

    Science.gov (United States)

    Pandya, Sunil K

    2009-01-01

    The Medical Council of India is a statutory national agency charged with several responsibilities. Sadly, it is plagued by inefficiency, arbitrariness and lack of transparency. It has been functioning for some years as the fiefdom of one person--Dr Ketan Desai. He has been re-elected president of the council despite strictures against him by the High Court of New Delhi. This essay provides data that may help the reader identify the rot within the Council. Permitted optimism, we may hope that this essay and similar observations by others will prompt a change for the better. At present such optimism is not justified.

  18. Fungi associated with fruit crown rot in organic banana (Musa spp. L. in Piura, Peru

    Directory of Open Access Journals (Sweden)

    René Aguilar Anccota

    2013-05-01

    Full Text Available The department of Piura is the principal banana-producing zone in Peru, sharing 87% of exportations. In this zone, one of the most important postharvest diseases is crown rot. The economic loses attributed to this disease are estimated to be between 25 and 30% of organic bananas exported. The objective of this study was to identify the causal agents associated with this disease. Samples taken refrigerated fruit from the areas of Querecotillo, Salitral and Mallares were taken and selected after the fact. Thielaviopsis paradoxa, Lasiodiplodia theobromae, Colletotrichum musae and Fusarium verticilloides. In order to demonstrate the pathogenicity of the isolated species, inoculations were given in the area of the crown of the fruit on healthy bananas. These fungi caused symptoms of infection in different proportions, concluding that crown rot is a disease with a complex etiology.

  19. The GSTome Reflects the Chemical Environment of White-Rot Fungi.

    Directory of Open Access Journals (Sweden)

    Aurélie Deroy

    Full Text Available White-rot fungi possess the unique ability to degrade and mineralize all the different components of wood. In other respects, wood durability, among other factors, is due to the presence of extractives that are potential antimicrobial molecules. To cope with these molecules, wood decay fungi have developed a complex detoxification network including glutathione transferases (GST. The interactions between GSTs from two white-rot fungi, Trametes versicolor and Phanerochaete chrysosporium, and an environmental library of wood extracts have been studied. The results demonstrate that the specificity of these interactions is closely related to the chemical composition of the extracts in accordance with the tree species and their localization inside the wood (sapwood vs heartwood vs knotwood. These data suggest that the fungal GSTome could reflect the chemical environment encountered by these fungi during wood degradation and could be a way to study their adaptation to their way of life.

  20. The GSTome Reflects the Chemical Environment of White-Rot Fungi

    Science.gov (United States)

    Deroy, Aurélie; Saiag, Fanny; Kebbi-Benkeder, Zineb; Touahri, Nassim; Hecker, Arnaud; Morel-Rouhier, Mélanie; Colin, Francis; Dumarcay, Stephane; Gérardin, Philippe; Gelhaye, Eric

    2015-01-01

    White-rot fungi possess the unique ability to degrade and mineralize all the different components of wood. In other respects, wood durability, among other factors, is due to the presence of extractives that are potential antimicrobial molecules. To cope with these molecules, wood decay fungi have developed a complex detoxification network including glutathione transferases (GST). The interactions between GSTs from two white-rot fungi, Trametes versicolor and Phanerochaete chrysosporium, and an environmental library of wood extracts have been studied. The results demonstrate that the specificity of these interactions is closely related to the chemical composition of the extracts in accordance with the tree species and their localization inside the wood (sapwood vs heartwood vs knotwood). These data suggest that the fungal GSTome could reflect the chemical environment encountered by these fungi during wood degradation and could be a way to study their adaptation to their way of life. PMID:26426695

  1. Age Dependence and Isotype Specificity of Influenza Virus Hemagglutinin Stalk-Reactive Antibodies in Humans

    Directory of Open Access Journals (Sweden)

    Raffael Nachbagauer

    2016-01-01

    Full Text Available Influenza remains a major global health burden. Seasonal vaccines offer protection but can be rendered less effective when the virus undergoes extensive antigenic drift. Antibodies that target the highly conserved hemagglutinin stalk can protect against drifted viruses, and vaccine constructs designed to induce such antibodies form the basis for a universal influenza virus vaccine approach. In this study, we analyzed baseline and postvaccination serum samples of children (6 to 59 months, adults (18 to 49 years, and elderly individuals (≥65 years who participated in clinical trials with a recombinant hemagglutinin-based vaccine. We found that baseline IgG and IgA antibodies against the H1 stalk domain correlated with the ages of patients. Children generally had very low baseline titers and did not respond well to the vaccine in terms of making stalk-specific antibodies. Adults showed the highest induction of stalk-specific antibodies, but the elderly had the highest absolute antibody titers against the stalk. Importantly, the stalk antibodies measured by enzyme-linked immunosorbent assay (ELISA showed neutralizing activity in neutralization assays and protected mice in a passive-transfer model in a stalk titer-dependent manner. Finally, we found similar patterns of stalk-specific antibodies directed against the H3 and influenza B virus hemagglutinins, albeit at lower levels than those measured against the H1 stalk. The relatively high levels of stalk-specific antibodies in the elderly patients may explain the previously reported low influenza virus infection rates in this age group. (This study has been registered at ClinicalTrials.gov under registration no. NCT00336453, NCT00539981, and NCT00395174.

  2. Hormonal regulation of the growth of leaves and inflorescence stalk in Muscari armeniacum Leichtl.

    Directory of Open Access Journals (Sweden)

    Marian Saniewski

    2016-04-01

    Full Text Available It is known that chilling of Muscari bulbs is necessary for the growth of the inflorescence stalk and flowering, but not for the growth of leaves. Gibberellic acid (GA accelerated stem growth and flowering in chilled Muscari bulbs. In the present experiment it was shown that in unchilled derooted Muscari bulbs the growth of leaves, but not the growth of the inflorescence stalk, was observed when bulbs were stored in water, GA at a concentration of 50 and 100 mg/L, benzyladenine (BA at a concentration of 25 and 50 mg/L, or a mixture of GA+BA (50+25 mg/L, but abscisic acid (ABA at a concentration of 10 mg/L greatly inhibited the growth of leaves. In chilled derooted Muscari bulbs the growth of leaves and inflorescence stalk was observed when bulbs were stored in water or GA, but BA and GA+BA treatments totally inhibited the growth of the inflorescence stalk without an effect on the growth of leaves. These results clearly showed that the growth of leaves and inflorescence stalk in Muscari bulbs are controlled by plant growth regulators in different ways. ABA totally inhibited the growth of leaves and inflorescence stalk in chilled derooted Muscari bulbs. It was shown that after the excision of the inflorescence bud in cultivated chilled Muscari bulbs, the inflorescence stalk died, but application of indole-3-acetic acid (IAA 0.5% in the place of the removed inflorescence bud induced the growth of the inflorescence stalk. IAA applied under the inflorescence bud inhibited the development of flowers (flower-bud blasting and induced the growth of the inflorescence stalk below the treatment site. These results are discussed with reference to hormonal regulation of stem (stalk growth in tulip, narcissus, hyacinth, and Hippeastrum.

  3. EXTRACELLULAR POLYSACCHARIDES OF POTATO RING ROT PATHOGEN

    Directory of Open Access Journals (Sweden)

    Shafikova Т.N.

    2006-03-01

    Full Text Available Many bacteria, including phytopathogenic ones produce extracellular polysaccharides or exopolysaccharides which are universal molecules. Causal agent of potato ring rot, Clavibacter michiganensis subspecies sepedonicus, secretes exopolysaccharides which role in pathogenesis is poorly investigated. The aim of our research is to ascertain the composition and structure of Clavibacter michiganensis subspecies sepedonicus exopolysaccharides. Exopolysaccharides of Clavibacter michiganensis subspecies sepedonicus are determined to consist of 4-6 anionic and neutral components which have molecular weights from 700 kDa. Glucose is a major monomer of polysaccharides and arabinose, rhamnose and mannose are minor monomers. Glucose is present in α-Dglucopyranose and β-D-glucopyranose configurations. Calcium is determined to be a component of exopolysaccharides. Components of exopolysaccharides of potato ring rot pathogen are probably capableto associate via calcium ions and other ionic interactions that may result in a change of their physiological activity. Further studies of Clavibacter michiganensis subspecies sepedonicus exopolysaccharides composition and structure can serve a base for the synthesis of their chemical analogues with elicitor action.

  4. Clarification properties of trash and stalk tissues from sugar cane.

    Science.gov (United States)

    Eggleston, Gillian; Grisham, Michael; Antoine, April

    2010-01-13

    The effect of the U.S. and worldwide change from burnt to unburnt (green) sugar cane harvesting on processing and the use of sugar cane leaves and tops as a biomass source has not been fully characterized. Sugar cane whole-stalks were harvested from the first ratoon (repeat) crop of five commercial, Louisiana sugar cane varieties (LCP 85-384, HoCP 96-540, L 97-128, L 99-226, and L 99-233). Replicated sample tissues of brown, dry leaves (BL), green leaves (GL), growing point region (GPR), and stalk (S) were separated. Composite juice from each tissue type was clarified following a hot lime clarification process operated by most U.S. factories. Only GPR and GL juices foamed on heating and followed the normal settling behavior of factory sugar cane juice, although GL was markedly slower than GPR. GPR juice aided settling. S juice tended to thin out rather than follow normal settling and exhibited the most unwanted upward motion of flocs. Most varietal variation in settling, mud, and clarified juice (CJ) characteristics occurred for GL. The quality rather than the quantity of impurities in the different tissues mostly affected the volume of mud produced: After 30 min of settling, mud volume per unit tissue juice degrees Brix (% dissolved solids) varied markedly among the tissues (S 1.09, BL 11.3, GPR 3.0, and GL 3.1 mL/degrees Brix). Heat transfer properties of tissue juices and CJs are described. Clarification was unable to remove all BL cellulosic particles. GL and BL increased color, turbidity, and suspended particles in CJs with BL worse than GL. This will make the future attainment of very high pol (VHP) raw sugar in the U.S. more difficult. Although optimization of factory unit processes will alleviate extra trash problems, economical strategies to reduce the amount of green and brown leaves processed need to be identified and implemented.

  5. Lithotrophic iron-oxidizing bacteria produce organic stalks to control mineral growth: implications for biosignature formation.

    Science.gov (United States)

    Chan, Clara S; Fakra, Sirine C; Emerson, David; Fleming, Emily J; Edwards, Katrina J

    2011-04-01

    Neutrophilic Fe-oxidizing bacteria (FeOB) are often identified by their distinctive morphologies, such as the extracellular twisted ribbon-like stalks formed by Gallionella ferruginea or Mariprofundus ferrooxydans. Similar filaments preserved in silica are often identified as FeOB fossils in rocks. Although it is assumed that twisted iron stalks are indicative of FeOB, the stalk's metabolic role has not been established. To this end, we studied the marine FeOB M. ferrooxydans by light, X-ray and electron microscopy. Using time-lapse light microscopy, we observed cells excreting stalks during growth (averaging 2.2  μm  h(-1)). Scanning transmission X-ray microscopy and near-edge X-ray absorption fine structure (NEXAFS) spectroscopy show that stalks are Fe(III)-rich, whereas cells are low in Fe. Transmission electron microscopy reveals that stalks are composed of several fibrils, which contain few-nanometer-sized iron oxyhydroxide crystals. Lepidocrocite crystals that nucleated on the fibril surface are much larger (∼100  nm), suggesting that mineral growth within fibrils is retarded, relative to sites surrounding fibrils. C and N 1s NEXAFS spectroscopy and fluorescence probing show that stalks primarily contain carboxyl-rich polysaccharides. On the basis of these results, we suggest a physiological model for Fe oxidation in which cells excrete oxidized Fe bound to organic polymers. These organic molecules retard mineral growth, preventing cell encrustation. This model describes an essential role for stalk formation in FeOB growth. We suggest that stalk-like morphologies observed in modern and ancient samples may be correlated confidently with the Fe-oxidizing metabolism as a robust biosignature.

  6. Lithotrophic iron-oxidizing bacteria produce organic stalks to control mineral growth: implications for biosignature formation

    Energy Technology Data Exchange (ETDEWEB)

    Chan, Clara S; Fakra, Sirine C; Emerson, David; Fleming, Emily J; Edwards, Katrina J

    2011-07-01

    Neutrophilic Fe-oxidizing bacteria (FeOB) are often identified by their distinctive morphologies, such as the extracellular twisted ribbon-like stalks formed by Gallionella ferruginea or Mariprofundus ferrooxydans. Similar filaments preserved in silica are often identified as FeOB fossils in rocks. Although it is assumed that twisted iron stalks are indicative of FeOB, the stalk's metabolic role has not been established. To this end, we studied the marine FeOB M. ferrooxydans by light, X-ray and electron microscopy. Using time-lapse light microscopy, we observed cells excreting stalks during growth (averaging 2.2 {micro}m h(-1)). Scanning transmission X-ray microscopy and near-edge X-ray absorption fine structure (NEXAFS) spectroscopy show that stalks are Fe(III)-rich, whereas cells are low in Fe. Transmission electron microscopy reveals that stalks are composed of several fibrils, which contain few-nanometer-sized iron oxyhydroxide crystals. Lepidocrocite crystals that nucleated on the fibril surface are much larger ({approx}100 nm), suggesting that mineral growth within fibrils is retarded, relative to sites surrounding fibrils. C and N 1s NEXAFS spectroscopy and fluorescence probing show that stalks primarily contain carboxyl-rich polysaccharides. On the basis of these results, we suggest a physiological model for Fe oxidation in which cells excrete oxidized Fe bound to organic polymers. These organic molecules retard mineral growth, preventing cell encrustation. This model describes an essential role for stalk formation in FeOB growth. We suggest that stalk-like morphologies observed in modern and ancient samples may be correlated confidently with the Fe-oxidizing metabolism as a robust biosignature.

  7. A mechanistic approach to methylene blue sorption on two vegetable wastes: Cork bark and grape stalks

    OpenAIRE

    Olivella Costa, Àngels; Fiol Santaló, Núria; Torre Yugueros, Florencio de la; Poch Garcia, Jordi; Villaescusa Gil, Isabel

    2012-01-01

    Two vegetable wastes, cork bark and grape stalks, were investigated for the removal of methylene blue from aqueous solution. The effects of contact time, dye concentration, pH, and temperature on sorption were studied relative to adsorption on a commercially-activated carbon. The highest adsorption yield was obtained within the pH range 5 to 10 for grape stalks and 7 to 10 for cork bark. The sorption kinetics of dye onto activated carbon and grape stalks was very fast. Kinetics data were fitt...

  8. Root rot diseases of sugar beet

    Directory of Open Access Journals (Sweden)

    Jacobsen Barry J.

    2006-01-01

    Full Text Available Root rot diseases of sugar beet caused by Rhizoctonia solani (AG 2-2 IIIB and AG 2-2 IV, R. crocorum, Aphanomyces cochlioides, Phoma betae, Macrophomina phaeseolina, Fusarium oxysporum f.sp. radicis-betae, Pythium aphanidermatum Phytophthora drechsleri, Rhizopus stolonifer, R. arrhizus and Sclerotium rolfsii cause significant losses wherever sugar beets are grown. However, not all these soil-borne pathogens have been reported in all sugar beet production areas. Losses include reduced harvestable tonnage and reduced white sugar recovery. Many of these pathogens also cause post harvest losses in storage piles. Control for diseases caused by these pathogens include disease resistant cultivars, avoidance of stresses, cultural practices such as water management and the use of fungicides.

  9. Energy balance associated with the degradation of lignocellulosic material by white-rot and brown-rot fungi.

    Science.gov (United States)

    Derrien, Delphine; Bédu, Hélène; Buée, Marc; Kohler, Annegret; Goodell, Barry; Gelhaye, Eric

    2017-04-01

    Forest soils cover about 30% of terrestrial area and comprise between 50 and 80% of the global stock of soil organic carbon (SOC). The major precursor for this forest SOC is lignocellulosic material, which is made of polysaccharides and lignin. Lignin has traditionally been considered as a recalcitrant polymer that hinders access to the much more labile structural polysaccharides. This view appears to be partly incorrect from a microbiology perspective yet, as substrate alteration depends on the metabolic potential of decomposers. In forest ecosystems the wood-rotting Basidiomycota fungi have developed two different strategies to attack the structure of lignin and gain access to structural polysaccharides. White-rot fungi degrade all components of plant cell walls, including lignin, using enzymatic systems. Brown-rot fungi do not remove lignin. They generate oxygen-derived free radicals, such as the hydroxyl radical produced by the Fenton reaction, that disrupt the lignin polymer and depolymerize polysaccharides which then diffuse out to where the enzymes are located The objective of this study was to develop a model to investigate whether the lignin relative persistence could be related to the energetic advantage of brown-rot degradative pathway in comparison to white-rot degradative pathway. The model simulates the changes in substrate composition over time, and determines the energy gained from the conversion of the lost substrate into CO2. The energy cost for the production of enzymes involved in substrate alteration is assessed using information derived from genome and secretome analysis. For brown-rot fungus specifically, the energy cost related to the production of OH radicals is also included. The model was run, using data from the literature on populous wood degradation by Trametes versicolor, a white-rot fungus, and Gloeophyllum trabeum, a brown-rot fungus. It demonstrates that the brown-rot fungus (Gloeophyllum trabeum) was more efficient than the white-rot

  10. Comparative Assessment of Pathogenicity of Storage Rot Causing ...

    African Journals Online (AJOL)

    L)Schott) corms were assessed for their potency in causing rot of the corms during storage. The isolates were Sclerotium rolfsii Sacc., Botryodiplodia theobromae Pat., Fusarium solanii (Mart) Sac., Fusarium SP. and Rhizopus stolonifer (Ehren ...

  11. Degradation of Bunker C Fuel Oil by White-Rot Fungi in Sawdust Cultures Suggests Potential Applications in Bioremediation.

    Directory of Open Access Journals (Sweden)

    Darcy Young

    Full Text Available Fungal lignocellulolytic enzymes are promising agents for oxidizing pollutants. This study investigated degradation of Number 6 "Bunker C" fuel oil compounds by the white-rot fungi Irpex lacteus, Trichaptum biforme, Phlebia radiata, Trametes versicolor, and Pleurotus ostreatus (Basidiomycota, Agaricomycetes. Averaging across all studied species, 98.1%, 48.6%, and 76.4% of the initial Bunker C C10 alkane, C14 alkane, and phenanthrene, respectively were degraded after 180 days of fungal growth on pine media. This study also investigated whether Bunker C oil induces changes in gene expression in the white-rot fungus Punctularia strigosozonata, for which a complete reference genome is available. After 20 days of growth, a monokaryon P. strigosozonata strain degraded 99% of the initial C10 alkane in both pine and aspen media but did not affect the amounts of the C14 alkane or phenanthrene. Differential gene expression analysis identified 119 genes with ≥ log2(2-fold greater expression in one or more treatment comparisons. Six genes were significantly upregulated in media containing oil; these genes included three enzymes with potential roles in xenobiotic biotransformation. Carbohydrate metabolism genes showing differential expression significantly accumulated transcripts on aspen vs. pine substrates, perhaps reflecting white-rot adaptations to growth on hardwood substrates. The mechanisms by which P. strigosozonata may degrade complex oil compounds remain obscure, but degradation results of the 180-day cultures suggest that diverse white-rot fungi have promise for bioremediation of petroleum fuels.

  12. Erwinia carotovora extracellular proteases : characterization and role in soft rot

    OpenAIRE

    Kyöstiö, Sirkka R. M.

    1990-01-01

    Erwinia carotovora subsp. carotovora (Ecc) strain EC14, a Gram-negative bacterium, causes soft rot on several crops, including potato. Maceration of potato tuber tissue is caused by secreted pectolytic enzymes. Other cell-degrading enzymes may also have roles in pathogenesis, including cellulases, phospholipases, and protease(s). The objectives of this research were to (1) characterize Ecc extracellular protease (Prt) and (2) elucidate its role in potato soft rot. A gene enc...

  13. Association of Pectolytic Fluorescent PSeudomonas with Postharvest Rots of Onion

    OpenAIRE

    H.H. El-Hendawy

    2004-01-01

    Five isolates of pectolytic fluorescent pseudomonads were obtained from a rotted onion bulb and identified as Pseudomonas marginalis. At both 4 and 25oC, all isolates caused soft rot to detached plant parts of onion and to carrot, celery, cucumber, pepper, spinach, tomato and turnip (but not garlic). They did not however cause any symptoms in living plants of these same species. These results suggest that the onion isolates are a postharvest pathogen which is not destructive in th...

  14. Autohydrolysis and organosolv process for recovery of hemicelluloses, phenolic compounds and lignin from grape stalks.

    Science.gov (United States)

    Amendola, D; De Faveri, D M; Egües, I; Serrano, L; Labidi, J; Spigno, G

    2012-03-01

    A combination of two environment-friend processes for hemicelluloses and lignin recovery from red grape stalks were investigated: an autohydrolysis pretreatment at 180°C for 30 min followed by a non-catalysed ethanol organosolv step at 180°C for 90 min. Hemicelluloses were precipitated by ethanol addition to autohydrolysis liquor, while lignin was tentatively precipitated by acidification of liquors from both the processes. Results suggest that stalks hemicelluloses can be easily hydrolysed requiring a milder treatment to reduce sugar degradation, while the organosolv process did not give a consistent delignification. Autohydrolysis allowed a recovery of 2% (on stalks d.m.) of total phenols in the liquor. Organosolv liquor had a higher concentration of phenols (corresponding to 0.72% of stalks d.m.) which almost completely precipitated with lignin. Copyright © 2011 Elsevier Ltd. All rights reserved.

  15. [Effect of 5-azacitidine on flower stalk branching in sugar beet (Beta vulgaris L.)].

    Science.gov (United States)

    Maletskaia, E I; Iudanova, S S; Maletskiĭ, S I

    2006-01-01

    An influence of epimutagen 5-azacitidine on a flower stalk morphogenesis in sugar beet was studied. After the epimutagene treatment the great number of the first- and the third-order branch formation was observed. A higher level of branching completely modified the flower stalk architectonics (generations A0Az0 and A1Az1). A number of the second-order branches in the control and the experimental plants were not distinguished. A new epiphenotype with higher level of branching (generation A0Az0) inherited in daughter generation A1Az1. A flower stalk architectonics was modified because the third-order branches developed in the bract axil instead of flower primordium. A great number of lateral shoot modified a metamer organization of the flower stalk. The metamers on the third-order branches were single-flowered.

  16. Age Dependence and Isotype Specificity of Influenza Virus Hemagglutinin Stalk-Reactive Antibodies in Humans.

    Science.gov (United States)

    Nachbagauer, Raffael; Choi, Angela; Izikson, Ruvim; Cox, Manon M; Palese, Peter; Krammer, Florian

    2016-01-19

    Influenza remains a major global health burden. Seasonal vaccines offer protection but can be rendered less effective when the virus undergoes extensive antigenic drift. Antibodies that target the highly conserved hemagglutinin stalk can protect against drifted viruses, and vaccine constructs designed to induce such antibodies form the basis for a universal influenza virus vaccine approach. In this study, we analyzed baseline and postvaccination serum samples of children (6 to 59 months), adults (18 to 49 years), and elderly individuals (≥65 years) who participated in clinical trials with a recombinant hemagglutinin-based vaccine. We found that baseline IgG and IgA antibodies against the H1 stalk domain correlated with the ages of patients. Children generally had very low baseline titers and did not respond well to the vaccine in terms of making stalk-specific antibodies. Adults showed the highest induction of stalk-specific antibodies, but the elderly had the highest absolute antibody titers against the stalk. Importantly, the stalk antibodies measured by enzyme-linked immunosorbent assay (ELISA) showed neutralizing activity in neutralization assays and protected mice in a passive-transfer model in a stalk titer-dependent manner. Finally, we found similar patterns of stalk-specific antibodies directed against the H3 and influenza B virus hemagglutinins, albeit at lower levels than those measured against the H1 stalk. The relatively high levels of stalk-specific antibodies in the elderly patients may explain the previously reported low influenza virus infection rates in this age group. (This study has been registered at ClinicalTrials.gov under registration no. NCT00336453, NCT00539981, and NCT00395174.) The present study provides evidence that titers of broadly neutralizing hemagglutinin stalk-reactive antibodies increase with age, possibly due to repeated exposure to divergent influenza viruses. These relatively high levels of antistalk titers may be

  17. Comparative studies on thermochemical characterization of corn stover pretreated by white-rot and brown-rot fungi.

    Science.gov (United States)

    Zeng, Yelin; Yang, Xuewei; Yu, Hongbo; Zhang, Xiaoyu; Ma, Fuying

    2011-09-28

    The effects of white-rot and brown-rot fungal pretreatment on the chemical composition and thermochemical conversion of corn stover were investigated. Fungus-pretreated corn stover was analyzed by Fourier transform infrared spectroscopy and X-ray diffraction analysis to characterize the changes in chemical composition. Differences in thermochemical conversion of corn stover after fungal pretreatment were investigated using thermogravimetric and pyrolysis analysis. The results indicated that the white-rot fungus Irpex lacteus CD2 has great lignin-degrading ability, whereas the brown-rot fungus Fomitopsis sp. IMER2 preferentially degrades the amorphous regions of the cellulose. The biopretreatment favors thermal decomposition of corn stover. The weight loss of IMER2-treated acid detergent fiber became greater, and the oil yield increased from 32.7 to 50.8%. After CD2 biopretreatment, 58% weight loss of acid detergent lignin was achieved and the oil yield increased from 16.8 to 26.8%.

  18. Association mapping in sunflower for sclerotinia head rot resistance

    Directory of Open Access Journals (Sweden)

    Fusari Corina M

    2012-06-01

    Full Text Available Abstract Background Sclerotinia Head Rot (SHR is one of the most damaging diseases of sunflower in Europe, Argentina, and USA, causing average yield reductions of 10 to 20 %, but leading to total production loss under favorable environmental conditions for the pathogen. Association Mapping (AM is a promising choice for Quantitative Trait Locus (QTL mapping, as it detects relationships between phenotypic variation and gene polymorphisms in existing germplasm without development of mapping populations. This article reports the identification of QTL for resistance to SHR based on candidate gene AM. Results A collection of 94 sunflower inbred lines were tested for SHR under field conditions using assisted inoculation with the fungal pathogen Sclerotinia sclerotiorum. Given that no biological mechanisms or biochemical pathways have been clearly identified for SHR, 43 candidate genes were selected based on previous transcript profiling studies in sunflower and Brassica napus infected with S. sclerotiorum. Associations among SHR incidence and haplotype polymorphisms in 16 candidate genes were tested using Mixed Linear Models (MLM that account for population structure and kinship relationships. This approach allowed detection of a significant association between the candidate gene HaRIC_B and SHR incidence (P  Conclusions These results suggest that AM will be useful in dissecting other complex traits in sunflower, thus providing a valuable tool to assist in crop breeding.

  19. Surface characterization of corn stalk superfine powder studied by FTIR and XRD.

    Science.gov (United States)

    Zhao, Xiaoyan; Chen, Jun; Chen, Fengliang; Wang, Xianchang; Zhu, Qingjun; Ao, Qiang

    2013-04-01

    Corn stalk superfine powder was ground by a special designed machine. The physical-chemical properties of corn stalk powders with particle sizes of >300, 300-150, 150-74, 74-37 and particle size distributions of the powders were: d(90)=362, 147, 74, 40 and 12 μm. The size of corn stalk powders was smaller, the surface area (from 1.188 to 2.432 m(2)/g) and bulk density (from 0.103 to 0.1145 g/ml) were greater. Light microscopy (LM) and scanning electron microscopy (SEM) observations revealed the shape and surface morphology of five types of corn stalk powders. FTIR analysis showed that some position of absorbing peaks was shifted as the powder particle size decreased. X-ray diffraction analyses for corn stalk coarse and superfine powders revealed no evident changes in X-ray pattern. However, the crystallinity, intensity of crystal peaks and crystal size of corn stalk powders with particle sizes from >300 to 300-150 μm dropped, then, as the size of the powders decreased, the crystallinity, intensity of crystal peaks and crystal size increased in some degree. Copyright © 2012 Elsevier B.V. All rights reserved.

  20. Image analysis of anatomical traits in stalk transections of maize and other grasses.

    Science.gov (United States)

    Heckwolf, Sven; Heckwolf, Marlies; Kaeppler, Shawn M; de Leon, Natalia; Spalding, Edgar P

    2015-01-01

    Grass stalks architecturally support leaves and reproductive structures, functionally support the transport of water and nutrients, and are harvested for multiple agricultural uses. Research on these basic and applied aspects of grass stalks would benefit from improved capabilities for measuring internal anatomical features. In particular, methods suitable for phenotyping populations of plants are needed. To meet the need for large-scale measurements of stalk anatomy features, we developed custom image processing software that utilized a variety of global thresholding, local filtering, and feature detection methods to measure rind thickness, pith area, vascular bundle counts, and individual vascular bundle size from digital images of hand-cut transections of stalks collected with a flatbed document scanner. The tool determined vascular bundle number with an average accuracy of 90% across maize genotypes that varied five-fold for this trait. The method is demonstrated on maize, sorghum, and Miscanthus stalks. The computer source code is staged for download. Simplicity of sample preparation and semi-automated analyses enabled by this tool greatly increase measurement throughput relative to standard microscopy-based techniques while maintaining high accuracy. The tool is expected to be useful in genetic and physiological studies of the relationships between stalk anatomy and traits such as biofuel suitability, water use efficiency, or nutrient transport.

  1. Extraction and Characterization of Fibres from the Stalk and Spikelets of Empty Fruit Bunch

    Directory of Open Access Journals (Sweden)

    Yakum Reneta Nafu

    2015-01-01

    Full Text Available Fibres from different parts of empty fruit bunch, which is a major solid waste from oil palm processing, were subjected to different pretreatments and characterised for variability in length and diameter, mechanical performance, and proximate and trace element composition. Morphology and surface composition of the fibres were determined using scanning electron microscopy with energy dispersive X-ray. The fibres were further treated with KOH-boric acid and characterized by Fourier transform infrared spectroscopy, X-ray diffraction, and scanning electron microscopy. Fibre yield was higher for spikelet than stalk. Fibres from stalk were generally larger in diameter and showed significant differences in potassium and galacturonic acid content, strength, and rigidity. Scanning electron microscopy confirmed the widespread occurrence of silica bodies as well as significant differences in the microstructure of stalk and spikelet fibres. Stalk fibres showed a greater level of porosity than spikelet fibres in the section perpendicular to the major axis. The morphology of KOH-boric acid treated fibres suggested higher recalcitrance of spikelet fibres. The significant differences between fibres from stalk and spikelet suggest that EFB, used as feedstock for biobased industries, requires more systematic characterization and separation into stalk and spikelet, which may lead to a more judicious exploitation of this valuable waste.

  2. Enzymatic saccharification of high pressure assist-alkali pretreated cotton stalk and structural characterization.

    Science.gov (United States)

    Du, Shuang-kui; Su, Xia; Yang, Weihua; Wang, Yanqin; Kuang, Meng; Ma, Lei; Fang, Dan; Zhou, Dayun

    2016-04-20

    Cotton stalk is a potential biomass for bioethanol production, while the conversion of direct saccharification or biotransformation of cotton stalk is extremely low due to the recalcitrant nature of lignocellulose. To enhance the enzymatic conversion of cotton stalks, the enzymatic saccharification parameters of high pressure assist-alkali pretreatment (HPAP) cotton stalk were optimized in the present study. Results indicated that a maximum reducing sugar yield of 54.7g/100g dry biomass cellulose was achieved at a substrate concentration of 2%, 100rpm agitation, 0.6g/g enzyme loading, 40°C hydrolysis temperature, 50h saccharification time, and pH 5.0. Scanning electron microscopy, X-ray diffraction, and Fourier transform infrared spectroscopy were used to identify structural changes in native, pretreated biomass and hydrolyzed residues. Structural analysis revealed large part of amorphous cellulose and partial crystalline cellulose in the HPAP cotton stalk were hydrolyzed during enzymatic treatment. HPAP cotton stalk can be used as a potential feed stock for bioethanol production. Copyright © 2015 Elsevier Ltd. All rights reserved.

  3. QTLs for Resistance to Major Rice Diseases Exacerbated by Global Warming: Brown Spot, Bacterial Seedling Rot, and Bacterial Grain Rot

    OpenAIRE

    Mizobuchi, Ritsuko; Fukuoka, Shuichi; Tsushima, Seiya; Yano, Masahiro; Sato, Hiroyuki

    2016-01-01

    In rice (Oryza sativa L.), damage from diseases such as brown spot, caused by Bipolaris oryzae, and bacterial seedling rot and bacterial grain rot, caused by Burkholderia glumae, has increased under global warming because the optimal temperature ranges for growth of these pathogens are relatively high (around 30??C). Therefore, the need for cultivars carrying genes for resistance to these diseases is increasing to ensure sustainable rice production. In contrast to the situation for other impo...

  4. QTLs for Resistance to Major Rice Diseases Exacerbated by Global Warming: Brown Spot, Bacterial Seedling Rot, and Bacterial Grain Rot.

    Science.gov (United States)

    Mizobuchi, Ritsuko; Fukuoka, Shuichi; Tsushima, Seiya; Yano, Masahiro; Sato, Hiroyuki

    2016-12-01

    In rice (Oryza sativa L.), damage from diseases such as brown spot, caused by Bipolaris oryzae, and bacterial seedling rot and bacterial grain rot, caused by Burkholderia glumae, has increased under global warming because the optimal temperature ranges for growth of these pathogens are relatively high (around 30 °C). Therefore, the need for cultivars carrying genes for resistance to these diseases is increasing to ensure sustainable rice production. In contrast to the situation for other important rice diseases such as blast and bacterial blight, no genes for complete resistance to brown spot, bacterial seedling rot or bacterial grain rot have yet been discovered. Thus, rice breeders have to use partial resistance, which is largely influenced by environmental conditions. Recent progress in molecular genetics and improvement of evaluation methods for disease resistance have facilitated detection of quantitative trait loci (QTLs) associated with resistance. In this review, we summarize the results of worldwide screening for cultivars with resistance to brown spot, bacterial seedling rot and bacterial grain rot and we discuss the identification of QTLs conferring resistance to these diseases in order to provide useful information for rice breeding programs.

  5. Study on Maize Stalk Lodging Resistance in Cyclic Cross Selection

    Directory of Open Access Journals (Sweden)

    Andreea ONA

    2017-11-01

    the control hybrids Turda 201, Turda Favorit and PR39D81. Variance analysis was performed according to the classical model of a two-factor system. Genic effects were calculated after 2nd North Carolina model. Regarding the results, the highest percentage of unbroken plants was on TD 268 tester (80.7% and the lowest on TD 364 tested line (70.2%. Tested lines that was noted for the general combining ability of lodging resistance were TA 452 and TE 335. Crossings that marked high values for non-additive effects were TA 452 x TC 385A, TE 202B x TC 399 and TE 202B x TD 268. Effects values for general combining ability were between -4.72% and +4.49% on tested lines, -1.68% and +5.78% on testers; effects values for specific combining ability were between -11.25% and +7.58%. Regarding the tested lines was noted TA 452 inbred line and regarding the testers was noted TD 268 inbred line. On this issue, we can state that in the selection process of maize hybrids must be chosen only those hybrid combinations with stalk-lodging resistance because of the similar contribution of additive and non-additive genic effects to resistant genotypes.

  6. Cytotoxic Triterpenoids from the Stalks of Microtropis triflora.

    Science.gov (United States)

    Zhang, Xiao-Wei; Wang, Kui-Wu; Zhou, Man-Qing

    2017-07-01

    Bioassay-guided phytochemical investigation of the stalks of Microtropis triflora Merr. & F.L. Freeman led to the isolation of ten triterpenes 1 - 10, including one novel compound 3,24-epoxy-2α,24-dihydroxyfriedelan-29-oic acid (1). Their chemical structures were identified on the basis of spectroscopic analysis, including HR-ESI mass spectrometry, 1D- and 2D-NMR ( 1 H, 13 C, 1 H, 1 H-COSY, HSQC, HMBC, and NOESY), and by comparison with the data reported. The cytotoxicities of compounds 1 - 10 against a panel of cultured human tumor cell lines (Bcap37, SMMC7721, HeLa, CNE) were evaluated. The new compound 1 showed moderate anti-tumor activities with IC 50 values of 39.22, 29.24, 23.28, and 68.81 μm/ml, respectively. These results might be helpful for explaining the use of M. triflora in traditional medicine. Triterpenes are characteristic of Microtropis genus and could be useful as potential chemotaxonomic markers. © 2017 Wiley-VHCA AG, Zurich, Switzerland.

  7. Extraction and Hydrophobic Modification of Cotton Stalk Bark Fiber

    Directory of Open Access Journals (Sweden)

    Ya-Yu Li

    2016-01-01

    Full Text Available Cotton stalk bark fiber (CSBF was extracted at high temperature and under high pressure, under the condition of the alkali content of 11 wt%. Experimental results proved that the extraction yield of CSBF was 27.3 wt%, and the residual alkali concentration was 2.1 wt%. Then five kinds of modifiers including methyl methacrylate (MMA, MMA plus initiator, epoxy propane, copper ethanolamine, and silane coupling agent were chosen to modify the surface of CSBF. It was found by measuring water retention value (WRV that these five kinds of modifiers were all effective and the silane coupling agent was best modifier among all. The optimal modifying conditions of silane coupling agent were obtained: modifier concentration was 5%, the mixing temperature was 20°C, the mixing time was 1 h, and vacuum drying time was 1 h. Under the optimal condition, the WRV of the modified CSBF was 89%. It is expected that these modified CSBF may be a filler with strengthening effect in wood plastic composites (WPC fields.

  8. Dilute sulfuric acid pretreatment of sunflower stalks for sugar production.

    Science.gov (United States)

    Ruiz, Encarnación; Romero, Inmaculada; Moya, Manuel; Cara, Cristóbal; Vidal, Juan D; Castro, Eulogio

    2013-07-01

    In this work the pretreatment of sunflower stalks by dilute sulfuric acid is studied. Pretreatment temperature and the concentration of acid solution were selected as operation variables and modified according to a central rotatable composite experimental design. Based on previous studies pretreatment time was kept constant (5 min) while the variation range for temperature and acid concentration was centered at 175°C and 1.25% (w/v) respectively. Following pretreatment the insoluble solids were separated by filtration and further submitted to enzymatic hydrolysis, while liquid fractions were analyzed for sugars and inhibitors. Response surface methodology was applied to analyze results based on the combined severity of pretreatment experiments. Optimized results show that up to 33 g of glucose and xylose per 100g raw material (65% of the glucose and xylose present in the raw material) may be available for fermentation after pretreatment at 167°C and 1.3% sulfuric acid concentration. Copyright © 2013 Elsevier Ltd. All rights reserved.

  9. Cyber stalking victimisation of women: Evaluating the effectiveness of current laws in India from restorative justice and therapeutic jurisprudential perspectives

    Directory of Open Access Journals (Sweden)

    Halder Debarati

    2015-01-01

    Full Text Available Victimisation of women through cyber stalking is one of the most serious crimes against women. Many countries including India have developed laws regulating cyber stalking. This article argues that since both, restorative justice (RJ and therapeutic jurisprudence (TJ are victim oriented, the issue of cyber stalking of women may be dealt with by RJ process and the laws in this regard must be analysed by the legal actors with a background in RJ and TJ philosophy. India had earlier taken up therapeutic punishment policy to enforce rights of the accused. But the modern principles of TJ have still not been considered in the RJ background in cyber stalking cases. This article therefore examines whether RJ and TJ principles can replace retributive principles for cyber stalking victimisation. It also examines the Indian cyber stalking law from RJ and TJ perspectives to assess its effectiveness for victims.

  10. Crystallization of the two-domain N-terminal fragment of the archaeal ribosomal protein L10(P0) in complex with a specific fragment of 23S rRNA

    Energy Technology Data Exchange (ETDEWEB)

    Kravchenko, O. V.; Mitroshin, I. V.; Gabdulkhakov, A. G.; Nikonov, S. V.; Garber, M. B., E-mail: garber@vega.protres.ru [Institute of Protein Research RAS (Russian Federation)

    2011-07-15

    Lateral L12-stalk (P1-stalk in Archaea, P1/P2-stalk in eukaryotes) is an obligatory morphological element of large ribosomal subunits in all organisms studied. This stalk is composed of the complex of ribosomal proteins L10(P0) and L12(P1) and interacts with 23S rRNA through the protein L10(P0). L12(P1)-stalk is involved in the formation of GTPase center of the ribosome and plays an important role in the ribosome interaction with translation factors. High mobility of this stalk puts obstacles in determination of its structure within the intact ribosome. Crystals of a two-domain N-terminal fragment of ribosomal protein L10(P0) from the archaeon Methanococcus jannaschii in complex with a specific fragment of rRNA from the same organism have been obtained. The crystals diffract X-rays at 3.2 Angstrom-Sign resolution.

  11. Crystallization of the two-domain N-terminal fragment of the archaeal ribosomal protein L10(P0) in complex with a specific fragment of 23S rRNA

    Science.gov (United States)

    Kravchenko, O. V.; Mitroshin, I. V.; Gabdulkhakov, A. G.; Nikonov, S. V.; Garber, M. B.

    2011-07-01

    Lateral L12-stalk (P1-stalk in Archaea, P1/P2-stalk in eukaryotes) is an obligatory morphological element of large ribosomal subunits in all organisms studied. This stalk is composed of the complex of ribosomal proteins L10(P0) and L12(P1) and interacts with 23S rRNA through the protein L10(P0). L12(P1)-stalk is involved in the formation of GTPase center of the ribosome and plays an important role in the ribosome interaction with translation factors. High mobility of this stalk puts obstacles in determination of its structure within the intact ribosome. Crystals of a two-domain N-terminal fragment of ribosomal protein L10(P0) from the archaeon Methanococcus jannaschii in complex with a specific fragment of rRNA from the same organism have been obtained. The crystals diffract X-rays at 3.2 Å resolution.

  12. Identification of Pathogenic Fusarium spp. Causing Maize Ear Rot and Potential Mycotoxin Production in China.

    Science.gov (United States)

    Duan, Canxing; Qin, Zihui; Yang, Zhihuan; Li, Weixi; Sun, Suli; Zhu, Zhendong; Wang, Xiaoming

    2016-06-21

    Ear rot is a serious disease that affects maize yield and grain quality worldwide. The mycotoxins are often hazardous to humans and livestock. In samples collected in China between 2009 and 2014, Fusarium verticillioides and F. graminearum species complex were the dominant fungi causing ear rot. According to the TEF-1α gene sequence, F. graminearum species complex in China included three independent species: F. graminearum, F. meridionale, and F. boothii. The key gene FUM1 responsible for the biosynthesis of fumonisin was detected in all 82 F. verticillioides isolates. Among these, 57 isolates mainly produced fumonisin B₁, ranging from 2.52 to 18,416.44 µg/g for each gram of dry hyphal weight, in vitro. Three different toxigenic chemotypes were detected among 78 F. graminearum species complex: 15-ADON, NIV and 15-ADON+NIV. Sixty and 16 isolates represented the 15-ADON and NIV chemotypes, respectively; two isolates carried both 15-ADON and NIV-producing segments. All the isolates carrying NIV-specific segment were F. meridionale. The in vitro production of 15-ADON, 3-ADON, DON, and ZEN varied from 5.43 to 81,539.49; 6.04 to 19,590.61; 13.35 to 19,795.33; and 1.77 to 430.24 µg/g of dry hyphal weight, respectively. Altogether, our present data demonstrate potential main mycotoxin production of dominant pathogenic Fusarium in China.

  13. Experimental co-digestion of corn stalk and vermicompost to improve biogas production

    International Nuclear Information System (INIS)

    Chen Guangyin; Zheng Zheng; Yang Shiguan; Fang Caixia; Zou Xingxing; Luo Yan

    2010-01-01

    Anaerobic co-digestion of corn stalk and vermicompost (VC) as well as mono-digestion of corn stalk were investigated. Batch mono-digestion experiments were performed at 35 ± 1 o C and initial total solid loading (TSL) ranged from 1.2% to 6.0%. Batch co-digestion experiments were performed at 35 ± 1 o C and initial TSL of 6% with VC proportions ranged from 20% to 80% of total solid (TS). For mono-digestion of corn stalk, a maximum methane yield of 217.60 ± 13.87 mL/g TS added was obtained at initial TSL of 4.8%, and acidification was found at initial TSL of 6.0% with the lowest pH value of 5.10 on day 4. Co-digestion improved the methane yields by 4.42-58.61% via enhancing volatile fatty acids (VFAs) concentration and pH value compared with mono-digestion of corn stalk. The maximum biogas yield of 410.30 ± 11.01 mL/g TS added and methane yield of 259.35 ± 13.85 mL/g TS added were obtained for 40% VC addition. Structure analysis by X-ray diffractometry (XRD) showed that the lowest crystallinity of 35.04 of digested corn stalk was obtained from co-digestion with 40% VC, which decreased 29.4% compared to 49.6 obtained from un-treated corn stalk. It is concluded that co-digestion with VC is beneficial for improving biodigestibility and methane yield from corn stalk.

  14. Functional role of the C-terminal tail of the archaeal ribosomal stalk in recruitment of two elongation factors to the sarcin/ricin loop of 23S rRNA.

    Science.gov (United States)

    Imai, Hirotatsu; Miyoshi, Tomohiro; Murakami, Ryo; Ito, Kosuke; Ishino, Yoshizumi; Uchiumi, Toshio

    2015-07-01

    Two types of elongation factors alternate in their binding to the factor-binding center of the ribosome. Both binding events are accompanied by GTP hydrolysis and drive the translation elongation cycle. The multicopy ribosomal protein family, termed the stalk, contributes actively to the elongation process. Recent evidence indicates that the mobile C-terminal tail of archaeal stalk aP1 directly interacts with both the elongation factors aEF1A and aEF2. To investigate the functional significance of these interactions in recruitment of elongation factors to the factor-binding center of the ribosome, we substituted the archaeal stalk complex aL10•aP1 for the bL10•bL12 stalk complex in the Escherichia coli 50S subunit. The resultant hybrid ribosome accessed archaeal aEF1A and aEF2 in a manner dependent on the C-terminal tail containing the hydrophobic residues Leu103, Leu106 and Phe107. Bases G2659 and A2660 in the sarcin/ricin loop (SRL) of 23S rRNA were protected against DMS modification by both factors as was A1067 by aEF2. Mutagenesis indicated that this protection was dependent on the intact C-terminal tail of aP1. The results suggest a crucial role for the interactions between the stalk C-terminal tail and elongation factors in their recruitment to the SRL of 23S rRNA within the ribosome. © 2015 The Molecular Biology Society of Japan and Wiley Publishing Asia Pty Ltd.

  15. When professional kindness is misunderstood: boundaries and stalking issues: a case study for the home health clinician.

    Science.gov (United States)

    Holz, Cheryl L

    2009-01-01

    There is the potential for home health nurses and other home care clinicians to be subjected to intrusive and possibly stalking behavior by current and former clients. Most healthcare clinicians do not receive training on the risk of intrusive interactions or stalking, nor on strategies to manage this objectionable client behavior. This article informs nurses and other home health clinicians about the potential risk of stalking. Included is a true case vignette, the legal definition of stalking, incidence occurrence among clinicians, the basic profile and behaviors of a stalker, the victimology and psychological consequences, and implications for policy and procedures and prevention techniques.

  16. Genetic variation between Phytophthora cactorum isolates differing in their ability to cause crown rot in strawberry.

    Science.gov (United States)

    Eikemo, Håvard; Klemsdal, Sonja S; Riisberg, Ingvild; Bonants, Peter; Stensvand, Arne; Tronsmo, Anne M

    2004-03-01

    Analysis of 44 isolates of Phytophthora cactorum, isolated from strawberry and other hosts, by AFLP showed that the crown rot pathotype is different from leather rot isolates and from P. cactorum isolated from other hosts. 16 of 23 crown rot isolates, including isolates from Europe, Japan, Australia, and New Zealand, were identical in an analysis based on 96 polymorphic bands from seven primer combinations. Leather rot isolates of strawberry could not be distinguished from isolates from other hosts. The pathogenicity test of all 44 isolates on strawberry plants mostly gave unambiguous results, except for three American isolates, which seemed to have reduced aggressiveness compared to the crown rot isolates. These isolates also differed in the AFLP analysis. Comparing information on the origin of the isolates with results from the pathogenicity test, showed that isolates from strawberry fruits or petioles could be either leather rot or crown rot pathotypes. None of the isolates from hosts other than strawberry caused crown rot symptoms in strawberry.

  17. ROTS: An R package for reproducibility-optimized statistical testing.

    Science.gov (United States)

    Suomi, Tomi; Seyednasrollah, Fatemeh; Jaakkola, Maria K; Faux, Thomas; Elo, Laura L

    2017-05-01

    Differential expression analysis is one of the most common types of analyses performed on various biological data (e.g. RNA-seq or mass spectrometry proteomics). It is the process that detects features, such as genes or proteins, showing statistically significant differences between the sample groups under comparison. A major challenge in the analysis is the choice of an appropriate test statistic, as different statistics have been shown to perform well in different datasets. To this end, the reproducibility-optimized test statistic (ROTS) adjusts a modified t-statistic according to the inherent properties of the data and provides a ranking of the features based on their statistical evidence for differential expression between two groups. ROTS has already been successfully applied in a range of different studies from transcriptomics to proteomics, showing competitive performance against other state-of-the-art methods. To promote its widespread use, we introduce here a Bioconductor R package for performing ROTS analysis conveniently on different types of omics data. To illustrate the benefits of ROTS in various applications, we present three case studies, involving proteomics and RNA-seq data from public repositories, including both bulk and single cell data. The package is freely available from Bioconductor (https://www.bioconductor.org/packages/ROTS).

  18. Genetic variation between Phytophthora cactorum isolates differing in their ability to cause crown rot in strawberry

    OpenAIRE

    Eikemo, H.; Klemsdal, S.S.; Riisberg, I.; Bonants, P.J.M.; Stensvand, A.; Tronsmo, A.M.

    2004-01-01

    Analysis of 44 isolates of Phytophthora cactorum, isolated from strawberry and other hosts, by AFLP showed that the crown rot pathotype is different from leather rot isolates and from P. cactorum isolated from other hosts. 16 of 23 crown rot isolates, including isolates from Europe, Japan, Australia, and New Zealand, were identical in an analysis based on 96 polymorphic bands from seven primer combinations. Leather rot isolates of strawberry could not be distinguished from isolates from other...

  19. Physico-chemical pretreatment and enzymatic hydrolysis of cotton stalk for ethanol production by Saccharomyces cerevisiae.

    Science.gov (United States)

    Singh, Anita; Bajar, Somvir; Bishnoi, Narsi R

    2017-11-01

    The aim of this work was to study the physico-chemical pretreatment and enzymatic hydrolysis of cotton stalk for ethanol production by Saccharomyces cerevisiae. Firstly, factors affecting pretreatment were screened out by Plackett-Burman design (PBD) and most significant factors were further optimized by Box-Behnken design (BBD). As shown by experimental study, most significant factors were FeCl 3 concentration (FC), irradiation time (IT) and substrate concentration (SC) affecting pretreatment of cotton stalk among all studied factors. Under optimum conditions of pretreatment FC 0.15mol/l, IT 20min and SC 55g/l, the release of reducing sugar was 6.6g/l. Hydrolysis of pretreated cotton stalk was done by crude on-site produced enzymes and hydrolysate was concentrated. Ethanol production by Saccharomyces cerevisiae using concentrated cotton stalk hydrolysate was 9.8g p /l, with ethanol yield 0.37g p /g s on consumed sugars. The data indicated that microwave FeCl 3 pretreated cotton stalk hydrolyses by crude unprocessed enzyme cocktail was good, and ethanol can be produced by fermentation of hydrolysate. Copyright © 2017 Elsevier Ltd. All rights reserved.

  20. A Kinetic Study of Marginal Soil Energy Plant Helianthus annuus Stalk Pyrolysis

    Directory of Open Access Journals (Sweden)

    Huaxiao Yan

    2013-01-01

    Full Text Available The pyrolytic characteristics and kinetics of new marginal soil energy plant Helianthus annuus stalk were investigated using thermogravimetric (TG method from 50 to 800°C in an inert argon atmosphere at different heating rates of 5, 10, 20, and 30°C min−1. The kinetic parameters of activation energy and pre-exponential factor were deduced by Popescu, Flynn-Wall-Ozawa (FWO, and Kissinger-Akahira-Sunose (KAS methods, respectively. The results showed that three stages appeared in the thermal degradation process. The primary devolatilization stage of H. annuus stalk can be described by the Avrami-Erofeev function (n=4. The average activation energy of H. annuus stalk was only 142.9 kJ mol−1. There were minor kinetic compensation effects between the pre-exponential factor and the activation energy. The results suggest that H. annuus stalk is suitable for pyrolysis, and more importantly, the experimental results and kinetic parameters provided useful information for the design of pyrolytic processing system using H. annuus stalk as feedstock.

  1. First report of Fusarium proliferatum causing dry rot in Michigan commercial potato (Solanum tuberosum) production

    Science.gov (United States)

    Fusarium dry rot of potato is a postharvest disease caused by several Fusarium spp. and is of worldwide importance. Thirteen Fusarium spp. have been implicated in fungal dry rots of potatoes worldwide. Among them, 11 species have been reported causing potato dry rot of seed tubers in the northern Un...

  2. Fusarium spp. causing dry rot of seed potato tubers in Michigan and their sensitivity to fungicides

    Science.gov (United States)

    Fusarium dry rot of potato (Solanum tuberosum L.) is a postharvest disease that can be caused by several Fusarium spp. A survey was conducted to establish the composition of Fusarium species causing dry rot of seed tubers in Michigan. A total of 370 dry rot symptomatic tubers were collected in 2009 ...

  3. Occurrence of wood-and root- rot basidiomycetes on trees in Bayero ...

    African Journals Online (AJOL)

    Several death and decays or rots of tropical trees are as result of infection caused by wood and root rot 'parasitic basidiomycetes. In the present study, survey of parasitic homobasidiomycetes causing wood and root rot on woody trees in Bayero University, Kano (two campuses) was carried out between April – September ...

  4. Genetic variation between Phytophthora cactorum isolates differing in their ability to cause crown rot in strawberry

    NARCIS (Netherlands)

    Eikemo, H.; Klemsdal, S.S.; Riisberg, I.; Bonants, P.J.M.; Stensvand, A.; Tronsmo, A.M.

    2004-01-01

    Analysis of 44 isolates of Phytophthora cactorum, isolated from strawberry and other hosts, by AFLP showed that the crown rot pathotype is different from leather rot isolates and from P. cactorum isolated from other hosts. 16 of 23 crown rot isolates, including isolates from Europe, Japan,

  5. Dispersion of the soybean root rot by Cycloneda sanguinea (Coleoptera: Coccinellidae).

    Science.gov (United States)

    Salgado-Neto, Geraldo; Vaz, Marcos André Braz; Guedes, Jerson Vanderlei Carús; Muniz, Marlove Fátima Brião; Blume, Elena; Wilcken, Carlos Frederico; Castro, Bárbara Monteiro de Castro E; Plata-Rueda, Angelica; Zanuncio, José Cola

    2018-02-05

    The dispersion of pathogenic microorganisms consists of the transport of pathogens from their source to inoculate a new host. Agricultural and economic importance of the Soybean root rot justifies studying this disease, especially the role of insects as dispersers. The aim of this study was to evaluate the role of the ladybird beetle, Cycloneda sanguinea Linnaeus (Coleoptera: Coccinellidae) in the dispersion of pathogens that cause Soybean root rot. Three pathogen species, Macrophomina phaseolina (Tassi) (Sphaeropsidales: Botryosphaeriaceae), Fusarium incarnatum-equiseti species complex (FIESC), and F. commune (Skovgaard) O'Donnell & Nirenberg were isolated from the midgut of ladybird beetles and cultured. Macrophomina phaseolina was identified by morphology while for the other two species, DNA was sequenced. The DNA extracted was amplified in the Internal Transcriber Spacer (ITS) region, sequenced and compared to voucher sequences deposited in the GenBank. Sequences of nucleotide ITS1-5.8 S were identified in the regions of rDNA-ITS4 ribosomal DNA. This is the first report of Macrophomina phaseolina (Tassi) (Sphaeropsidales: Botryosphaeriaceae), Fusarium incarnatum-equiseti species complex (FIESC), and F. commune (Skovgaard) O'Donnell & Nirenberg, being dispersed by C. sanguinea in Brazilian soybean fields.

  6. The special neuraminidase stalk-motif responsible for increased virulence and pathogenesis of H5N1 influenza A virus.

    Directory of Open Access Journals (Sweden)

    Hongbo Zhou

    Full Text Available The variation of highly pathogenic avian influenza H5N1 virus results in gradually increased virulence in poultry, and human cases continue to accumulate. The neuraminidase (NA stalk region of influenza virus varies considerably and may associate with its virulence. The NA stalk region of all N1 subtype influenza A viruses can be divided into six different stalk-motifs, H5N1/2004-like (NA-wt, WSN-like, H5N1/97-like, PR/8-like, H7N1/99-like and H5N1/96-like. The NA-wt is a special NA stalk-motif which was first observed in H5N1 influenza virus in 2000, with a 20-amino acid deletion in the 49(th to 68(th positions of the stalk region. Here we show that there is a gradual increase of the special NA stalk-motif in H5N1 isolates from 2000 to 2007, and notably, the special stalk-motif is observed in all 173 H5N1 human isolates from 2004 to 2007. The recombinant H5N1 virus with the special stalk-motif possesses the highest virulence and pathogenicity in chicken and mice, while the recombinant viruses with the other stalk-motifs display attenuated phenotype. This indicates that the special stalk-motif has contributed to the high virulence and pathogenicity of H5N1 isolates since 2000. The gradually increasing emergence of the special NA stalk-motif in H5N1 isolates, especially in human isolates, deserves attention by all.

  7. Molecular Basis of Resistance to Fusarium Ear Rot in Maize

    Directory of Open Access Journals (Sweden)

    Alessandra Lanubile

    2017-10-01

    Full Text Available The impact of climate change has been identified as an emerging issue for food security and safety, and the increased incidence of mycotoxin contamination in maize over the last two decades is considered a potential emerging hazard. Disease control by chemical and agronomic approaches is often ineffective and increases the cost of production; for this reason the exploitation of genetic resistance is the most sustainable method for reducing contamination. The review focuses on the significant advances that have been made in the development of transcriptomic, genetic and genomic information for maize, Fusarium verticillioides molds, and their interactions, over recent years. Findings from transcriptomic studies have been used to outline a specific model for the intracellular signaling cascade occurring in maize cells against F. verticillioides infection. Several recognition receptors, such as receptor-like kinases and R genes, are involved in pathogen perception, and trigger down-stream signaling networks mediated by mitogen-associated protein kinases. These signals could be orchestrated primarily by hormones, including salicylic acid, auxin, abscisic acid, ethylene, and jasmonic acid, in association with calcium signaling, targeting multiple transcription factors that in turn promote the down-stream activation of defensive response genes, such as those related to detoxification processes, phenylpropanoid, and oxylipin metabolic pathways. At the genetic and genomic levels, several quantitative trait loci (QTL and single-nucleotide polymorphism markers for resistance to Fusarium ear rot deriving from QTL mapping and genome-wide association studies are described, indicating the complexity of this polygenic trait. All these findings will contribute to identifying candidate genes for resistance and to applying genomic technologies for selecting resistant maize genotypes and speeding up a strategy of breeding to contrast disease, through plants

  8. Extracellular oxidases and the transformation of solubilised low-rank coal by wood-rot fungi

    Energy Technology Data Exchange (ETDEWEB)

    Ralph, J.P. [Flinders Univ. of South Australia, Bedford Park (Australia). School of Biological Sciences; Graham, L.A. [Flinders Univ. of South Australia, Bedford Park (Australia). School of Biological Sciences; Catcheside, D.E.A. [Flinders Univ. of South Australia, Bedford Park (Australia). School of Biological Sciences

    1996-12-31

    The involvement of extracellular oxidases in biotransformation of low-rank coal was assessed by correlating the ability of nine white-rot and brown-rot fungi to alter macromolecular material in alkali-solubilised brown coal with the spectrum of oxidases they produce when grown on low-nitrogen medium. The coal fraction used was that soluble at 3.0{<=}pH{<=}6.0 (SWC6 coal). In 15-ml cultures, Gloeophyllum trabeum, Lentinus lepideus and Trametes versicolor produced little or no lignin peroxidase, manganese (Mn) peroxidase or laccase activity and caused no change to SWC6 coal. Ganoderma applanatum and Pycnoporus cinnabarinus also produced no detectable lignin or Mn peroxidases or laccase yet increased the absorbance at 400 nm of SWC6 coal. G. applanatum, which produced veratryl alcohol oxidase, also increased the modal apparent molecular mass. SWC6 coal exposed to Merulius tremellosus and Perenniporia tephropora, which secreted Mn peroxidases and laccase and Phanerochaete chrysosporium, which produced Mn and lignin peroxidases was polymerised but had unchanged or decreased absorbance. In the case of both P. chrysosporium and M. tremellosus, polymerisation of SWC6 coal was most extensive, leading to the formation of a complex insoluble in 100 mM NaOH. Rigidoporus ulmarius, which produced only laccase, both polymerised and reduced the A{sub 400} of SWC6 coal. P. chrysosporium, M. tremellosus and P. tephropora grown in 10-ml cultures produced a spectrum of oxidases similar to that in 15-ml cultures but, in each case, caused more extensive loss of A{sub 400}, and P. chrysosporium depolymerised SWC6 coal. It is concluded that the extracellular oxidases of white-rot fungi can transform low-rank coal macromolecules and that increased oxygen availability in the shallower 10-ml cultures favours catabolism over polymerisation. (orig.)

  9. Effect of acid pretreatment on different parts of corn stalk for second generation ethanol production.

    Science.gov (United States)

    Li, Ping; Cai, Di; Luo, Zhangfeng; Qin, Peiyong; Chen, Changjing; Wang, Yong; Zhang, Changwei; Wang, Zheng; Tan, Tianwei

    2016-04-01

    In this study, the effects of different parts of corn stalk, including stem, leaf, flower, cob and husk on second generation ethanol production were evaluated. FTIR, XRD and SEM were performed to investigate the effect of dilute acid pretreatment. The bagasse obtained after pretreatment were further hydrolyzed by cellulase and used as the substrate for ethanol fermentation. As results, hemicelluloses fractions in different parts of corn stalk were dramatically removed and the solid fractions showed vivid compositions and crystallinities. Compared with other parts of corn stalk, the cob had higher sugar content and better enzymatic digestibility. The highest glucose yield of 94.2% and ethanol production of 24.0 g L(-1) were achieved when the cob was used as feedstock, while the glucose yield and the ethanol production were only 86.0% and 17.1 g L(-1) in the case of flower. Copyright © 2016 Elsevier Ltd. All rights reserved.

  10. Stalking and psychological abuse: common factors and relationship-specific characteristics.

    Science.gov (United States)

    Dye, Melanie Livet; Davis, Keith E

    2003-04-01

    The purpose of this study was to refine and elaborate models of personality and relationship-specific characteristics in the perpetration of stalking and psychological abuse. Three hundred and forty-two college students who had been in intimate relationships completed a series of questionnaires about their most recent breakup and their former relationship. Our hypotheses were supported, with harsh parental discipline, anxious attachment, and need for control of one's partner forming a common cluster in the prediction of stalking and psychological abuse. For psychological abuse, relationship dissatisfaction added to the predictive factors; whereas for stalking, the level of anger-jealousy over the breakup was the major added factor. Degree of anger-jealousy was influenced by being the recipient of a breakup and the level of passion.

  11. Wet Oxidation Pretreatment of Tobacco Stalks and Orange Waste for Bioethanol Production. Preliminary results

    DEFF Research Database (Denmark)

    Martin, Carlos; Fernandez, Teresa; Garcia, Ariel

    2009-01-01

    Wet oxidation (WO) was used as a pretreatment method prior to enzymatic hydrolysis of tobacco stalks and orange waste. The pretreatment, performed at 195 degrees C and an oxygen pressure of 1.2 MPa, for 15 min, in the presence of Na2CO3, increased the cellulose content of the materials and gave...... cellulose recoveries of approximately 90%. The pretreatment enhanced the susceptibility of cellulose to enzymatic hydrolysis. The highest enzymatic convertibility, that of 64.9%, was achieved for pretreated tobacco stalks. The ethanolic fermentation of the WO filtrates, using Saccharomyces cerevisiae......, was inhibited compared to the fermentation of a reference glucose solution. Inhibition was more intense for the filtrate of tobacco stalks than for that of orange waste. The inhibition degree of the volumetric productivity of ethanol was higher (79.1-86.8%) than that of the ethanol yield (7.1-9.5%)....

  12. The effect of Cerasus avium stalk extract on albumin glycation reaction

    Directory of Open Access Journals (Sweden)

    Mohadeseh Abdoli

    2014-10-01

    Full Text Available Background: Non-enzymatic glycosylation of proteins is the major cause of diabetic complications. The inhibition of glycation process can reduce complications of diabetes. In the Iranian traditional medicine, the decoction (boiled extraction of Cerasus avium stalk is used as a hypoglycemic agent. The aim of this study was to investigate the in vitro inhibitory effects of decoction and ethanolic and aqueous extracts of Cerasus avium stalk on albumin glycation reaction. Methods: In this experimental study, first, the ethanolic, aqueous and decoction extracts of Cerasus avium stalk were prepared. Then, different concentrations of these extracts were prepared and added to albumin and glucose solutions. Finally, compared to control group that was not treated with any extracts, the albumin glycation rate in the groups treated with various concentrations of extracts was evaluated using TBA (thio-barbituric acid method. Results: The results showed that compared to control group, decoction of Cerasus avium stalk in the concentrations of 20, 10 and 2 mg/dl could reduce albumin glycation to 85.10±1.55, 72.35±1.75 and 51.25±1.22 %, respectively (P>0.001. Moreover, in the concentration of 20 mg/dl, the inhibitory effect of decoction of Cerasus avium stalk on the albumin glycation reaction was higher than those of aqueous (P=0.021 and ethanolic (P=0.009 extracts. Conclusion: The findings showed that the extracs of Cerasus avium stalk, in particular in the decoction form, could significantly reduce the rate of albumin glycation; therefore, it can be used for decreasing diabetes mellitus complications.

  13. 24 CFR 5.2005 - Protection of victims of domestic violence, dating violence, and stalking in public and Section 8...

    Science.gov (United States)

    2010-04-01

    ... PROGRAM REQUIREMENTS; WAIVERS Protection for Victims of Domestic Violence in Public and Section 8 Housing § 5.2005 Protection of victims of domestic violence, dating violence, and stalking in public and Section 8 housing. (a) Domestic violence, dating violence, or stalking. An incident or incidents of actual...

  14. Ecological and physiological aspects of aestivation-diapause in the larvae of two Pyralid stalk borers of maize in Kenya

    NARCIS (Netherlands)

    Scheltes, P.

    1978-01-01

    Stalk borers are highly destructive to a large number of important graminaceous crops all over the world. Some examples of economically important stalk borers and a general description of their life-cycle are mentioned in chapter 1. In the same chapter difficulties in controlling the insects are

  15. Body stalk anomaly: Three months of survival. Case report and literature review

    Directory of Open Access Journals (Sweden)

    Thiago Luiz Do Nascimento Lazaroni

    2016-11-01

    Full Text Available Body stalk anomaly is composed of a set of genetic component abnormalities that are still rather unknown. This anomaly consists of a large defect in the abdominal wall closure, anatomical defects of the pelvis and lower limbs, severe scoliosis, and pulmonary hypoplasia. In addition to these deformities are heart disease and neural tube closure defects. Because of the association of these severe deformities, the cases described in the literature have proven to be almost entirely incompatible with life, resulting in abortion and stillborn fetuses. Therefore, the present article describes a case of body stalk anomaly that survived for nearly three months, the first of its kind in Latin America.

  16. Using feature objects aided strategy to evaluate the biomethane production of food waste and corn stalk anaerobic co-digestion.

    Science.gov (United States)

    Zhou, Qi; Yuan, Hairong; Liu, Yanping; Zou, Dexun; Zhu, Baoning; Chufo, Wachemo A; Jaffar, Muhammad; Li, Xiujin

    2015-03-01

    Feature objects aided strategy was used to predict and evaluate the biomethane production of food waste and corn stalk anaerobic co-digestion. The kinetics of co-digestion and mono-digestion of food waste and/or corn stalk was also analyzed. The results indicated that the compositions of food waste and corn stalk were significantly different. The anaerobic digestion of three feature objects at different mixing ratios showed the different biomethane yields and kinetic constants. Food waste and corn stalk co-digestion enhanced the digestion rate and achieved 22.48% and 41.55% higher biomethane production than those of food waste and corn stalk mono-digestion, respectively. Copyright © 2014 Elsevier Ltd. All rights reserved.

  17. in vitro technique for selecting onion for white rot disease

    African Journals Online (AJOL)

    ACSS

    and Simmonds, D.H. 2003. Partial resistance to white mold in a transgenic soybean line. Crop Science 43: 92-95. Coventry, E., Noble, R., Mead, A. and Whipps,. J.M. 2005. Suppression of Allium white rot. (Sclerotium cepivorum) in different soils using vegetable wastes. European Journal of Plant Pathology 111: 101-112.

  18. Evaluation of common bean (Phaseolus vulgaris) response to charcoal rot

    Science.gov (United States)

    Charcoal rot in common beans (Phaseolus vulgaris L.), caused by Macrophomina phaseolina (Tassi) Gold. (Mph), is an endemic disease in the prevailing hot and dry conditions in southern Puerto Rico. This study evaluated the 120 bean genotypes that compose the BASE 120 panel under screenhouse conditio...

  19. improvement of resistance to fusarium root rot through gene

    African Journals Online (AJOL)

    Prof. Adipala Ekwamu

    PhD. Thesis. University of KwaZulu-Natal, Pietmeritzburg,. South Africa. Navarro, F., Sass, M.E. and Nienhuis, J. 2003. Identification and mapping bean root rot resistance in an 'Eagle x Puebla 152' population. Annual Report of the Bean. Improvement Cooperative 47:83–84. Park, S.J. and Tu, J.C. 1994. Genetic segregation.

  20. Biodegrading effects of some rot fungi on Pinus caribaea wood

    African Journals Online (AJOL)

    STORAGESEVER

    2008-05-16

    May 16, 2008 ... degradation was peculiar with each fungus. Wood decay varied along the tree bole but was not related to height above the ground. The results indicated that biodegradation by rot fungi differs in intensity according to the fungus species and this suggested that preservative impregnation and retention may.

  1. Physiological studies of Sclerotium rolfsii Sacc. causing collar rot of ...

    African Journals Online (AJOL)

    In vitro studies were conducted on the effect of temperature, pH levels, carbon, nitrogen and amino acids on the mycelial growth and biomass production of Sclerotium rofsii Sacc. causing collar rot of mint. The results reveal that the growth of S. rolfsii was maximum at 30°C which was reduced significantly below 20°C and ...

  2. Botanicals to Control Soft Rot Bacteria of Potato

    Directory of Open Access Journals (Sweden)

    M. M. Rahman

    2012-01-01

    Full Text Available Extracts from eleven different plant species such as jute (Corchorus capsularis L., cheerota (Swertia chiraita Ham., chatim (Alstonia scholaris L., mander (Erythrina variegata, bael (Aegle marmelos L., marigold (Tagetes erecta, onion (Allium cepa, garlic (Allium sativum L., neem (Azadiracta indica, lime (Citrus aurantifolia, and turmeric (Curcuma longa L. were tested for antibacterial activity against potato soft rot bacteria, E. carotovora subsp. carotovora (Ecc P-138, under in vitro and storage conditions. Previously, Ecc P-138 was identified as the most aggressive soft rot bacterium in Bangladeshi potatoes. Of the 11 different plant extracts, only extracts from dried jute leaves and cheerota significantly inhibited growth of Ecc P-138 in vitro. Finally, both plant extracts were tested to control the soft rot disease of potato tuber under storage conditions. In a 22-week storage condition, the treated potatoes were significantly more protected against the soft rot infection than those of untreated samples in terms of infection rate and weight loss. The jute leaf extracts showed more pronounced inhibitory effects on Ecc-138 growth both in in vitro and storage experiments.

  3. Huanglongbing increases Diplodia Stem End Rot in Citrus sinensis

    Science.gov (United States)

    Huanglongbing (HLB), one of the most devastating diseases of citrus is caused by the a-Proteobacteria Candidatus Liberibacter. Diplodia natalensis Pole-Evans is a fungal pathogen which has been known to cause a postharvest stem-end rot of citrus, the pathogen infects citrus fruit under the calyx, an...

  4. Fungi associated with base rot disease of aloe vera (Aloe ...

    African Journals Online (AJOL)

    STORAGESEVER

    2008-12-17

    Dec 17, 2008 ... Fungi associated with base rot disease of Aloe vera (syn. Aloe barbadensis) were investigated in Niger. Delta Area of Nigeria. Fungi and their percentage frequency were Aspergillus verocosa 28.03%,. Fusarium oxysporium 24.24%, Plectosphaerella cucumerina 16.67%, Mammeria ehinobotryoides 15.91 ...

  5. Inflorescence rot disease of date palm is caused by Fusarium ...

    African Journals Online (AJOL)

    Zulfiqar-Ali

    2012-05-01

    May 1, 2012 ... inflorescence rot disease in southern part of Iraq is Fusarium proliferatum. Pathogenecity test confirmed the ... Key words: Fusarium proliferatum, ITS1, ITS4, pathogenecity, PCR, isolates, phylogeny. INTRODUCTION ..... ITS rRNA Region for Identification of Fusarium spp. from Ocular. Sources. Investigative ...

  6. Advancing our understanding of charcoal rot in soybeans

    Science.gov (United States)

    Charcoal rot (Macrophomina phaseolina (Tassi) Goid ) of soybean [Glycine max (L.) Merr.], is an important but commonly misidentified disease, and very few summary articles exist on this pathosystem. Research conducted over the last 10 years has improved our understanding of the environment conducive...

  7. Fungi associated with base rot disease of aloe vera ( Aloe ...

    African Journals Online (AJOL)

    Fungi associated with base rot disease of Aloe vera (syn. Aloe barbadensis) were investigated in Niger Delta Area of Nigeria. Fungi and their percentage frequency were Aspergillus verocosa 28.03%, Fusarium oxysporium 24.24%, Plectosphaerella cucumerina 16.67%, Mammeria ehinobotryoides 15.91% and Torula ...

  8. Inflorescence rot disease of date palm caused by Fusarium ...

    African Journals Online (AJOL)

    Date palm is one of the important income sources for many farmers in different parts of several countries, including Iraq, Iran, Saudi Arabia, North Africa etc. Inflorescence rot is a serious disease of date palm which limits its yield. The identification of the causal organism is a key step to tackling this disease, and such studies ...

  9. Evaluating host resistance to Macrophomina crown rot in strawberry

    Science.gov (United States)

    Macrophomina crown rot, caused by the soilborne fungus Macrophomina phaseolina, is an emerging pathogen in California strawberry production. When established, the pathogen can cause extensive plant decline and mortality. Host resistance will be a critical tool for managing this disease and guiding ...

  10. Detecting cotton boll rot with an electronic nose

    Science.gov (United States)

    South Carolina Boll Rot is an emerging disease of cotton, Gossypium hirsutum L., caused by the opportunistic bacteria, Pantoea agglomerans (Ewing and Fife). Unlike typical fungal diseases, bolls infected with P. agglomerans continue to appear normal externally, complicating early and rapid detectio...

  11. Factors contributing to bacterial bulb rots of onion

    Science.gov (United States)

    The incidence of bacterial rots of onion bulbs is increasing and has become a serious problem for growers. This increase is likely due to a combination of factors, such as high bacterial populations in soils and irrigation water, heavy rains flooding production fields, higher temperatures, etc. It m...

  12. Evaluation of antagonistic fungi against charcoal rot of sunflower ...

    African Journals Online (AJOL)

    user

    Results showed reduction in disease incidence of charcoal rot on sunflower cultivar G-66 with antagonist, A. flavus (100%) followed by A. niger (64.86%) P. capsulatum (63.79%) and T. viride (31.89%) over control. Decrease in disease incidence over control was 100% where seed was treated with combination of A. niger ...

  13. OXIDATION OF PERSISTANT ENVIRONMENTAL POLLUTANTS BY A WHITE ROT FUNGUS

    Science.gov (United States)

    The white rot fungus Phanerochaete chrysosporium degraded DDT [1,1,-bis(4-chlorophenyl)-2,2,2-trichloroethane], 3,4,3',4'-tetrachlorobiphenyl, 2,4,5,2',-4',5'-hexachlorobiphenyl, 2,3,7,8-tetrachlorodibenzo-p-dioxin, lindane (1,2,3,4,5,6-hexachlorocylohexane), and benzo[a]pyrene t...

  14. Corm Rot and Yellows of Gladiolus and Its Biomanagement

    Directory of Open Access Journals (Sweden)

    M. Khan

    2005-08-01

    Full Text Available A corm dressing containing Trichoderma harzianum (T014 and Pseudomonas fluorescens (PS07 cultured on a bagasse-soil-molasses mixture was tested for its efficacy against corm rot and yellows caused by Fusarium oxysporum f. sp. gladioli on the gladiolus (Gladiolus psittacinus L. cv. White Prosperity (WP, King Lear (KL, Friendship (FR, Her Majesty (HM and American Beauty (AB in a pot culture experiment. The effectiveness of the biocontrol agents was compared with that of the fungicide carbendazim (200 ppm. All cultivars were susceptible to the pathogenic fungus and developed the characteristic symptoms of corm rot and yellows. Cultivars HM and AB were highly susceptible, scoring 2.9–3.2 on a corm rot and yellows scale (0–5 scale; compared with 1.5–2.9 for the other cultivars. Fungal infection reduced plant growth and flowering significantly, with a 15–28% decrease in the number of florets/spike. Application of carbendazim, T. harzianum (P=0.001 and P. fluorescens (P=0.05 decreased the corm rot and yellows scores and the soil population of the pathogen, and increased plant growth and flowering. The greatest improvement in the flower variables of infected plants was recorded with P. fluorescens (+18–31% over control. The soil population of the bioagents increased significantly over time, both in the presence and in the absence of the pathogenic fungus, but more in its absence.

  15. Calonectria species associated with cutting rot of Eucalyptus

    NARCIS (Netherlands)

    Lombard, L.; Zhou, X.D.; Crous, P.W.; Wingfield, B.D.; Wingfield, M.J.

    2010-01-01

    Decline in the productivity of Eucalyptus hybrid cutting production in the Guangdong Province of China is linked to cutting rot associated with several Calonectria spp. The aim of this study was to identify these fungi using morphological and DNA sequence comparisons. Two previously undescribed

  16. Management of Potato Soft Rot by Gamma Irradiation

    International Nuclear Information System (INIS)

    Abd El-Ghany, H.; Moussa, Z.; Abd El-Rahman, A.F.; Salem, E.A.

    2017-01-01

    This investigation aims to apply a safe practice to minimize potato losses due to soft rot disease of tubers kept under ambient temperature. In this regard, gamma irradiation was used to extend keeping quality through its effect on soft rot bacteria. Eight bacterial isolates were recovered on Logan’s medium from kitchen kept tubers with symptoms of soft rot disease. Five isolates were found pathogenic and tentatively identified as Pectobacterium atrosepticum and Pectobacterium carotovorum sub sp. brasiliense on the basis of the usual bacteriological methods. A molecular method using 16SrDNA sequence analysis for verification of the identity of two isolates was made. The two bacterial isolates, Pectobacterium atrosepticum and Pectobacterium carotovorum sub sp. brasiliense, were irradiated by different doses of gamma rays. Complete inhibition occurred at doses 2.5 and 2.0 KGy for high densities (Approximately 4.0x10 9 CFU/ml) of P. atrosepticum and P. carotovorum sub sp. brasiliense, respectively. The D10 value of gamma irradiation was 0.24 KGy for P. atrosepticum and 0.20 KGy for P. carotovorum subsp. brasiliense. Irradiation of artificially infected tubers with soft rot bacteria using the two mentioned D10 doses for the two bacterial species increased the shelf life of tubers kept under ambient temperature. The internal chemical quality of tubers was shown to be improved by keeping the tubers under ambient temperature after irradiation by the two D10 doses 0.24 and 0.20 KGy

  17. Antagonistic Effect of Native Bacillus Isolates against Black Root Rot ...

    African Journals Online (AJOL)

    Faba bean (Vicia faba L.) is one of the most important pulse crops grown in eastern Africa. Black root rot (Fusarium solani) is known to cause great yield losses in faba bean, especially in the highlands of Ethiopia. The objective of this study was to evaluate the biological control ability of native Bacillus species on the basis of ...

  18. Autochthonous white rot fungi from the tropical forest: Potential of ...

    African Journals Online (AJOL)

    Autochthonous white rot fungi from the tropical forest: Potential of Cuban strains for dyes and textile industrial effluents decolourisation. MI Sánchez-López, SF Vanhulle, V Mertens, G Guerra, SH Figueroa, C Decock, A Corbisier, MJ Penninckx ...

  19. The influence of root rot incidence on cassava genotype on ...

    African Journals Online (AJOL)

    28 panelists were asked to indicate their degree of preference for the colour, odour and taste of each gari sample by choosing the appropriate category in the hedonic scale. The results were compared with the tuberous root rot incidence and severity of genotypes in the field. All experiments were repeated and the data ...

  20. Root rot of sugarbeet in the Vojvodina Province

    Directory of Open Access Journals (Sweden)

    Stojšin Vera B.

    2006-01-01

    Full Text Available Large changes introduced in the sugar beet production technology in the Vojvodina Province over last 40 years resulted in changes in the etiology and harmfulness of different agents of sugar beet root diseases. Improvements in cultivation practices reduced the harmfulness of some diseases while increased the harmfulness of others. Some disease agents became obsolete, but others gained importance. New agents of root diseases were found. The most frequent damages, persisting over long periods of time were caused by seedling damping-off, Fusarium root rot, charcoal root rot, parasitic (Rhizomania and non-parasitic root bearding. The parasitic damping-off caused by several fungal species but most frequently by Phoma betae occurred at the time when multigerm seeds were used in combination with extensive cultural practices. The agents of seedling diseases completely lost their significance as the consequence of switching to fungicide - treated monogerm seeds, earlier planting and improved soil tillage. In the period of intensive use of agricultural chemicals, seedling damping-off occurred frequently due to the phytotoxic action of chemicals (insecticides, herbicides and mineral fertilizers. In some years, frosts caused damping- off of sugar beet seedlings on a large scale in the Vojvodina Province. Poor sugar beet germination and emergence were frequently due to spring droughts. Sometimes they were due to strong winds. The occurrence of Fusarium root rot and charcoal root rot intensified on poor soils. Fusariosis symptoms were exhibited as plant wilting and different forms of root rot. In recent years root tip rot has occurred frequently in the first part of the growing season causing necrosis and dying of plants. Lateral roots tended to proliferate from the healthy tissue, giving the root a bearded appearance similar to Rhizomania. Fusarium oxysporum was the most frequent agent of this fusariosis. F. graminearum, F. equiseti, F. solani have also been

  1. Control of lettuce bottom rot by isolates of Trichoderma spp

    Directory of Open Access Journals (Sweden)

    Zayame Vegette Pinto

    2014-06-01

    Full Text Available Bottom rot, caused by Rhizoctonia solani AG 1-IB, is an important disease affecting lettuce in Brazil, where its biological control with Trichoderma was not developed yet. The present study was carried out with the aim of selecting Trichoderma isolates to be used in the control of lettuce bottom rot. Forty-six Trichoderma isolates, obtained with baits containing mycelia of the pathogen, were evaluated in experiments carried out in vitro and in vivo in a greenhouse in two steps. In the laboratory, the isolates were evaluated for their capabilities of parasitizing and producing toxic metabolic substances that could inhibit the pathogen mycelial growth. In the first step of the in vivo experiments, the number and the dry weight of lettuce seedlings of the cultivar White Boston were evaluated. In the second step, 12 isolates that were efficient in the first step and showed rapid growth and abundant sporulation in the laboratory were tested for their capability of controlling bottom rot in two repeated experiments, and had their species identified. The majority of the isolates of Trichoderma spp. (76% showed high capacity for parasitism and 50% of them produced toxic metabolites capable of inhibiting 60-100% of R. solani AG1-IB mycelial growth. Twenty-four isolates increased the number and 23 isolates increased the dry weight of lettuce seedlings inoculated with the pathogen in the first step of the in vivo experiments.In both experiments of the second step, two isolates of T. virens, IBLF 04 and IBLF 50, reduced the severity of bottom rot and increased the number and the dry weight of lettuce seedlings inoculated with R. solani AG1-IB. These isolates had shown a high capacity for parasitism and production of toxic metabolic substances, indicating that the in vitro and in vivo steps employed in the present study were efficient in selecting antagonists to be used for the control of lettuce bottom rot.

  2. Rice-Infecting Pseudomonas Genomes Are Highly Accessorized and Harbor Multiple Putative Virulence Mechanisms to Cause Sheath Brown Rot

    Science.gov (United States)

    Quibod, Ian Lorenzo; Grande, Genelou; Oreiro, Eula Gems; Borja, Frances Nikki; Dossa, Gerbert Sylvestre; Mauleon, Ramil; Cruz, Casiana Vera; Oliva, Ricardo

    2015-01-01

    Sheath rot complex and seed discoloration in rice involve a number of pathogenic bacteria that cannot be associated with distinctive symptoms. These pathogens can easily travel on asymptomatic seeds and therefore represent a threat to rice cropping systems. Among the rice-infecting Pseudomonas, P. fuscovaginae has been associated with sheath brown rot disease in several rice growing areas around the world. The appearance of a similar Pseudomonas population, which here we named P. fuscovaginae-like, represents a perfect opportunity to understand common genomic features that can explain the infection mechanism in rice. We showed that the novel population is indeed closely related to P. fuscovaginae. A comparative genomics approach on eight rice-infecting Pseudomonas revealed heterogeneous genomes and a high number of strain-specific genes. The genomes of P. fuscovaginae-like harbor four secretion systems (Type I, II, III, and VI) and other important pathogenicity machinery that could probably facilitate rice colonization. We identified 123 core secreted proteins, most of which have strong signatures of positive selection suggesting functional adaptation. Transcript accumulation of putative pathogenicity-related genes during rice colonization revealed a concerted virulence mechanism. The study suggests that rice-infecting Pseudomonas causing sheath brown rot are intrinsically diverse and maintain a variable set of metabolic capabilities as a potential strategy to occupy a range of environments. PMID:26422147

  3. Rice-Infecting Pseudomonas Genomes Are Highly Accessorized and Harbor Multiple Putative Virulence Mechanisms to Cause Sheath Brown Rot.

    Directory of Open Access Journals (Sweden)

    Ian Lorenzo Quibod

    Full Text Available Sheath rot complex and seed discoloration in rice involve a number of pathogenic bacteria that cannot be associated with distinctive symptoms. These pathogens can easily travel on asymptomatic seeds and therefore represent a threat to rice cropping systems. Among the rice-infecting Pseudomonas, P. fuscovaginae has been associated with sheath brown rot disease in several rice growing areas around the world. The appearance of a similar Pseudomonas population, which here we named P. fuscovaginae-like, represents a perfect opportunity to understand common genomic features that can explain the infection mechanism in rice. We showed that the novel population is indeed closely related to P. fuscovaginae. A comparative genomics approach on eight rice-infecting Pseudomonas revealed heterogeneous genomes and a high number of strain-specific genes. The genomes of P. fuscovaginae-like harbor four secretion systems (Type I, II, III, and VI and other important pathogenicity machinery that could probably facilitate rice colonization. We identified 123 core secreted proteins, most of which have strong signatures of positive selection suggesting functional adaptation. Transcript accumulation of putative pathogenicity-related genes during rice colonization revealed a concerted virulence mechanism. The study suggests that rice-infecting Pseudomonas causing sheath brown rot are intrinsically diverse and maintain a variable set of metabolic capabilities as a potential strategy to occupy a range of environments.

  4. Potential worldwide distribution of Fusarium dry root rot in common beans based on the optimal environment for disease occurrence.

    Directory of Open Access Journals (Sweden)

    Renan Macedo

    Full Text Available Root rots are a constraint for staple food crops and a long-lasting food security problem worldwide. In common beans, yield losses originating from root damage are frequently attributed to dry root rot, a disease caused by the Fusarium solani species complex. The aim of this study was to model the current potential distribution of common bean dry root rot on a global scale and to project changes based on future expectations of climate change. Our approach used a spatial proxy of the field disease occurrence, instead of solely the pathogen distribution. We modeled the pathogen environmental requirements in locations where in-situ inoculum density seems ideal for disease manifestation. A dataset of 2,311 soil samples from commercial farms assessed from 2002 to 2015 allowed us to evaluate the environmental conditions associated with the pathogen's optimum inoculum density for disease occurrence, using a lower threshold as a spatial proxy. We encompassed not only the optimal conditions for disease occurrence but also the optimal pathogen's density required for host infection. An intermediate inoculum density of the pathogen was the best disease proxy, suggesting density-dependent mechanisms on host infection. We found a strong convergence on the environmental requirements of both the host and the disease development in tropical areas, mostly in Brazil, Central America, and African countries. Precipitation and temperature variables were important for explaining the disease occurrence (from 17.63% to 43.84%. Climate change will probably move the disease toward cooler regions, which in Brazil are more representative of small-scale farming, although an overall shrink in total area (from 48% to 49% in 2050 and 26% to 41% in 2070 was also predicted. Understanding pathogen distribution and disease risks in an evolutionary context will therefore support breeding for resistance programs and strategies for dry root rot management in common beans.

  5. Potential worldwide distribution of Fusarium dry root rot in common beans based on the optimal environment for disease occurrence.

    Science.gov (United States)

    Macedo, Renan; Sales, Lilian Patrícia; Yoshida, Fernanda; Silva-Abud, Lidianne Lemes; Lobo, Murillo

    2017-01-01

    Root rots are a constraint for staple food crops and a long-lasting food security problem worldwide. In common beans, yield losses originating from root damage are frequently attributed to dry root rot, a disease caused by the Fusarium solani species complex. The aim of this study was to model the current potential distribution of common bean dry root rot on a global scale and to project changes based on future expectations of climate change. Our approach used a spatial proxy of the field disease occurrence, instead of solely the pathogen distribution. We modeled the pathogen environmental requirements in locations where in-situ inoculum density seems ideal for disease manifestation. A dataset of 2,311 soil samples from commercial farms assessed from 2002 to 2015 allowed us to evaluate the environmental conditions associated with the pathogen's optimum inoculum density for disease occurrence, using a lower threshold as a spatial proxy. We encompassed not only the optimal conditions for disease occurrence but also the optimal pathogen's density required for host infection. An intermediate inoculum density of the pathogen was the best disease proxy, suggesting density-dependent mechanisms on host infection. We found a strong convergence on the environmental requirements of both the host and the disease development in tropical areas, mostly in Brazil, Central America, and African countries. Precipitation and temperature variables were important for explaining the disease occurrence (from 17.63% to 43.84%). Climate change will probably move the disease toward cooler regions, which in Brazil are more representative of small-scale farming, although an overall shrink in total area (from 48% to 49% in 2050 and 26% to 41% in 2070) was also predicted. Understanding pathogen distribution and disease risks in an evolutionary context will therefore support breeding for resistance programs and strategies for dry root rot management in common beans.

  6. Potential worldwide distribution of Fusarium dry root rot in common beans based on the optimal environment for disease occurrence

    Science.gov (United States)

    Macedo, Renan; Sales, Lilian Patrícia; Yoshida, Fernanda; Silva-Abud, Lidianne Lemes

    2017-01-01

    Root rots are a constraint for staple food crops and a long-lasting food security problem worldwide. In common beans, yield losses originating from root damage are frequently attributed to dry root rot, a disease caused by the Fusarium solani species complex. The aim of this study was to model the current potential distribution of common bean dry root rot on a global scale and to project changes based on future expectations of climate change. Our approach used a spatial proxy of the field disease occurrence, instead of solely the pathogen distribution. We modeled the pathogen environmental requirements in locations where in-situ inoculum density seems ideal for disease manifestation. A dataset of 2,311 soil samples from commercial farms assessed from 2002 to 2015 allowed us to evaluate the environmental conditions associated with the pathogen’s optimum inoculum density for disease occurrence, using a lower threshold as a spatial proxy. We encompassed not only the optimal conditions for disease occurrence but also the optimal pathogen’s density required for host infection. An intermediate inoculum density of the pathogen was the best disease proxy, suggesting density-dependent mechanisms on host infection. We found a strong convergence on the environmental requirements of both the host and the disease development in tropical areas, mostly in Brazil, Central America, and African countries. Precipitation and temperature variables were important for explaining the disease occurrence (from 17.63% to 43.84%). Climate change will probably move the disease toward cooler regions, which in Brazil are more representative of small-scale farming, although an overall shrink in total area (from 48% to 49% in 2050 and 26% to 41% in 2070) was also predicted. Understanding pathogen distribution and disease risks in an evolutionary context will therefore support breeding for resistance programs and strategies for dry root rot management in common beans. PMID:29107985

  7. A rare cause of hyperprolactinemia: persistent trigeminal artery with stalk-section effect

    Energy Technology Data Exchange (ETDEWEB)

    Ekinci, G.; Baltacioglu, F.; Cimsit, C.; Akpinar, I.; Erzen, C. [Dept. of Radiology, Marmara University, Altunizade Istanbul (Turkey); Kilic, T.; Pamir, N. [Dept. of Neurosurgery, Faculty of Medicine, Marmara University, Altunizade Istanbul (Turkey)

    2001-04-01

    The primitive trigeminal, otic, hypoglossal, and proatlantal intersegmental arteries are fetal anastomoses between the carotid and vertebrobasilar systems. Persistent trigeminal artery (PTA) is the most frequent embryonic communication between the vertebrobasilar and carotid systems in adults. We report a case of PTA compressing the left side of the pituitary gland and stalk, in a patient with elevated blood prolactin level. (orig.)

  8. Study on the Possibility of Using Sunflower Stalk in Particleboard Production

    Directory of Open Access Journals (Sweden)

    Ghonche Rassam

    2012-01-01

    Full Text Available In this study, the possibility of using sunflower stalk for composite-board manufacturing was studied. Density of the boards were 0.45 g/cm3; variables included mixing ratios of sunflower stalk and industrial wood particles (100:0 , 70:30 , 50:50 , 30:70 and 0:100, type of  resin at two levels of urea formaldehyde and isocyanate (PMDIor polymeric diphenylmetane 4-4-Diisocyanate, and press-time of 5 and 7 minutes. Thickness swelling (TS after 2 & 24 hours soaking in water, damping of sound (Damp, modulus of rupture (MOR, modulus of elasticity (MOE and internal bonding (IB of the boards were measured. The results showed that by increasing sunflower stalk particles, the amounts of TS 2&24, MOR, MOE and IB of laboratory panel were significantly increased. Isocyanate resin reduced thickness swelling after 2&24 hours soaking in water and increased damping of sound as well as modulus of elasticity. Also, urea formaldehyde resin improved modulus of rupture and internal bonding of panels. Press temperature had significant impact on the measured properties. Overall, using sunflower stalk particles up to 70 percent, isocyanate resin, and press time of 7 minutes, could result in producing boards with acceptable physical & mechanical properties which are suitable for interior uses.

  9. Synergistic effect on co-pyrolysis of capsicum stalks and coal | Niu ...

    African Journals Online (AJOL)

    With the depletion of fossil fuel and the concern about environmental issues, the utilization of biomass resources has attracted increasing worldwide interest. The pyrolysis behavior of capsicum stalks and Baoji coal mixtures was investigated by TG-DSC. Results show that the thermal degradation temperature range of ...

  10. Initial courtship behavior and stalking: how should we draw the line?

    Science.gov (United States)

    Sinclair, H C; Frieze, I H

    2000-01-01

    As noted by Schaum and Parrish (1995), stalking blurs the boundaries between normal courtship and obsessive behavior. Consequently, stalking proves an elusive phenomenon to define and to study. Where does courtship end and stalking begin? To address this question, 197 women and 44 men from the University of Pittsburgh who had loved someone who did not love them in return were surveyed about their feelings and actions in response to this rejection. Factor analyses revealed six groupings of behaviors in response to unrequited courtship: approach, surveillance, intimidation, harming oneself, verbal abuse/mild physical harm, and extreme physical harm. Approach behavior was reported to be used more often by men, but there were no significant differences between men and women in the self-reported prevalence of other types of courtship behaviors. Correlations reveal that feelings of anger and depression were the most common predictors of violent behavior for both men and women. Pursuer-perceptions of what behaviors connoted "going too far" in pursuit of a relationship proved unreliable. However, when pursuers were asked whether their love interest was afraid of them, fear was a reaction perceived in response to intimidation. Although it is likely that pursuer perceptions of where to draw the line would differ from the view of the love object, these results suggest that engaging in intimidation would be an appropriate place to draw the line between courtship and stalking.

  11. Phomopsis subordinaria and associated stalk disease in natural-populations of Plantago lanceolata

    NARCIS (Netherlands)

    De Nooij, M.P.; Van der Aa, H.A.

    1987-01-01

    Natural populations of Plantago lanceolata L. can be infected by the fungus Phomopsis subordinaria (Desm.) Trav., which causes a stalk disease. Inoculation experiments revealed that the fungus needs a wound to enter the plant tissue. Symptoms of the disease in the field and from inoculation

  12. Continuous ethanol production using yeast immobilized on sugar-cane stalks

    Energy Technology Data Exchange (ETDEWEB)

    Vasconcelos, J.N. de [Alagoas Univ., Maceio, AL (Brazil). Dept. de Engenharia Quimica]. E-mail: jnunes@ctec.ufal.br; Lopes, C.E. [Pernambuco Univ., Recife, PE (Brazil). Dept. de Antibioticos; Franca, F.P. de [Universidade Federal, Rio de Janeiro, RJ (Brazil). Escola de Quimica. Dept. de Engenharia Bioquimica

    2004-09-01

    Sugar-cane stalks, 2.0 cm long, were used as a support for yeast immobilization envisaging ethanol production. The assays were conducted in 38.5 L fermenters containing a bed of stalks with 50% porosity. The operational stability of the immobilized yeast, the efficiency and stability of the process, as well as the best dilution rate were evaluated. Molasses from demerara sugar production was used in the medium formulation. It was diluted to obtain 111.75 {+-} 1.51 g/L without any further treatment. Sulfuric acid was used to adjust the pH value to around 4.2. Every two days Kamoran HJ (10 ppm) or with a mixture containing penicillin (10 ppm) and tetracycline (10 ppm), was added to the medium. Ethanol yield and efficiency were 29.64 g/L.h and 86.40%, respectively, and the total reducing sugars conversion was 74.61% at a dilution rate of 0.83 h{sup -1}. The yeast-stalk system was shown to be stable for over a 60 day period at extremely variable dilution rates ranging from 0.05 h{sup -1} to 3.00 h{sup -1}. The concentration of immobilized cell reached around 109 cells/gram of dry sugar-cane stalk when the fermenter was operating at the highest dilution rate (3.00 h{sup -1}). (author)

  13. Carbohydrate Status of Tulip Bulbs during Cold-Induced Flower Stalk Elongation and Flowering.

    Science.gov (United States)

    Lambrechts, H.; Rook, F.; Kolloffel, C.

    1994-01-01

    The effect of a cold treatment on the carbohydrate status of the scales and flower stalk of Tulipa gesneriana L. cv Apeldoorn bulbs during growth after planting was studied and compared with bulbs not given cold treatment. Bulbs were stored dry for 12 weeks at 5[deg]C (precooled) or 17[deg]C (noncooled). Only the 5[deg]C treatment led to rapid flower stalk elongation and flowering following planting at higher temperatures. Precooling enhanced mobilization of starch, fructans, and sucrose in the scales. The cold-stimulated starch breakdown was initially accompanied by increased [alpha]-amylase activity per scale. In noncooled bulbs, [alpha]-amylase activity slightly decreased or remained more or less constant. Cold-induced flower stalk elongation was partially accompanied by a decrease in the sucrose content and an increase in the glucose content and invertase activity per g dry weight. The starch content in internodes initially decreased and subsequently increased; [alpha]-amylase activity per g dry weight of the lowermost internode showed a peak pattern during starch breakdown and increased thereafter. The internodes of noncooled bulbs, on the contrary, accumulated sucrose. Their glucose content and invertase activity per g dry weight remained low. Starch breakdown was not found and [alpha]-amylase activity per g dry weight of the lowermost internode remained at a low level. Precooling of tulip bulbs thus favors reserve mobilization in the scales and flower stalk and glucose accumulation in the elongating internodes. PMID:12232100

  14. A comparison of soda and soda-AQ pulps from cotton stalks

    African Journals Online (AJOL)

    STORAGESEVER

    2009-11-16

    Nov 16, 2009 ... certain kappa number in a shorter cooking time resulting in advantages of shorter process and reduced energy consumption. The yield observed for cotton stalk was lower and kappa number was higher compared to the other non wood resources, such as reed (Kuang, 1986), hemp (Dharm et al., 2005) and ...

  15. Structure of a two-domain N-terminal fragment of ribosomal protein L10 from Methanococcus jannaschii reveals a specific piece of the archaeal ribosomal stalk.

    Science.gov (United States)

    Kravchenko, Olesya; Mitroshin, Ivan; Nikonov, Stanislav; Piendl, Wolfgang; Garber, Maria

    2010-06-04

    Ribosomal stalk is involved in the formation of the so-called "GTPase-associated site" and plays a key role in the interaction of ribosome with translation factors and in the control of translation accuracy. The stalk is formed by two or three copies of the L7/L12 dimer bound to the C-terminal tail of protein L10. The N-terminal domain of L10 binds to a segment of domain II of 23S rRNA near the binding site for ribosomal protein L11. The structure of bacterial L10 in complex with three L7/L12 N-terminal dimers has been determined in the isolated state, and the structure of the first third of archaeal L10 bound to domain II of 23S rRNA has been solved within the Haloarcula marismortui 50S ribosomal subunit. A close structural similarity between the RNA-binding domain of archaeal L10 and the RNA-binding domain of bacterial L10 has been demonstrated. In this work, a long RNA-binding N-terminal fragment of L10 from Methanococcus jannaschii has been isolated and crystallized. The crystal structure of this fragment (which encompasses two-thirds of the protein) has been solved at 1.6 A resolution. The model presented shows the structure of the RNA-binding domain and the structure of the adjacent domain that exist in archaeal L10 and eukaryotic P0 proteins only. Furthermore, our model incorporated into the structure of the H. marismortui 50S ribosomal subunit allows clarification of the structure of the archaeal ribosomal stalk base. Copyright (c) 2010 Elsevier Ltd. All rights reserved.

  16. Growth of wheat and lettuce and enzyme activities of soils under garlic stalk decomposition for different durations.

    Science.gov (United States)

    Han, Xu; Cheng, Zhihui; Meng, Huanwen

    2017-07-01

    Garlic (Allium sativum L.) stalk is a byproduct of garlic production that is normally thought of as waste but is now considered a useful biological resource. It is necessary to utilize this resource efficiently and reasonably to reduce environmental pollution and achieve sustainable agricultural development. The effect of garlic stalk decomposed for different durations was investigated in this study using wheat (Triticum aestivum L.) and lettuce (Lactuca sativa var. crispa L.) as test plants. Garlic stalk in early stages of decomposition inhibited the shoot and root lengths of wheat and lettuce, but it promoted the shoot and root lengths in later stages; longer durations of garlic stalk decomposition significantly increased the shoot and root fresh weights of wheat and lettuce, whereas shorter decomposing durations significantly decreased the shoot and root fresh weights; and garlic stalk at different decomposition durations increased the activities of urease, sucrase and alkaline phosphatase in soil where wheat or lettuce was planted. Garlic stalk decomposed for 30 or 40 days could promote the growth of wheat and lettuce plants as well as soil enzyme activities. These results may provide a scientific basis for the study and application of garlic stalk. © 2016 Society of Chemical Industry. © 2016 Society of Chemical Industry.

  17. Kinetochore–microtubule attachment throughout mitosis potentiated by the elongated stalk of the kinetochore kinesin CENP-E

    Science.gov (United States)

    Vitre, Benjamin; Gudimchuk, Nikita; Borda, Ranier; Kim, Yumi; Heuser, John E.; Cleveland, Don W.; Grishchuk, Ekaterina L.

    2014-01-01

    Centromere protein E (CENP-E) is a highly elongated kinesin that transports pole-proximal chromosomes during congression in prometaphase. During metaphase, it facilitates kinetochore–microtubule end-on attachment required to achieve and maintain chromosome alignment. In vitro CENP-E can walk processively along microtubule tracks and follow both growing and shrinking microtubule plus ends. Neither the CENP-E–dependent transport along microtubules nor its tip-tracking activity requires the unusually long coiled-coil stalk of CENP-E. The biological role for the CENP-E stalk has now been identified through creation of “Bonsai” CENP-E with significantly shortened stalk but wild-type motor and tail domains. We demonstrate that Bonsai CENP-E fails to bind microtubules in vitro unless a cargo is contemporaneously bound via its C-terminal tail. In contrast, both full-length and truncated CENP-E that has no stalk and tail exhibit robust motility with and without cargo binding, highlighting the importance of CENP-E stalk for its activity. Correspondingly, kinetochore attachment to microtubule ends is shown to be disrupted in cells whose CENP-E has a shortened stalk, thereby producing chromosome misalignment in metaphase and lagging chromosomes during anaphase. Together these findings establish an unexpected role of CENP-E elongated stalk in ensuring stability of kinetochore–microtubule attachments during chromosome congression and segregation. PMID:24920822

  18. Biochemical and molecular dynamic simulation analysis of a weak coiled coil association between kinesin-II stalks.

    Directory of Open Access Journals (Sweden)

    Harinath Doodhi

    Full Text Available DEFINITION: Kinesin-2 refers to the family of motor proteins represented by conserved, heterotrimeric kinesin-II and homodimeric Osm3/Kif17 class of motors. BACKGROUND: Kinesin-II, a microtubule-based anterograde motor, is composed of three different conserved subunits, named KLP64D, KLP68D and DmKAP in Drosophila. Although previous reports indicated that coiled coil interaction between the middle segments of two dissimilar motor subunits established the heterodimer, the molecular basis of the association is still unknown. METHODOLOGY/PRINCIPAL FINDINGS: Here, we present a detailed heterodimeric association model of the KLP64D/68D stalk supported by extensive experimental analysis and molecular dynamic simulations. We find that KLP64D stalk is unstable, but forms a weak coiled coil heteroduplex with the KLP68D stalk when coexpressed in bacteria. Local instabilities, relative affinities between the C-terminal stalk segments, and dynamic long-range interactions along the stalks specify the heterodimerization. Thermal unfolding studies and independent simulations further suggest that interactions between the C-terminal stalk fragments are comparatively stable, whereas the N-terminal stalk reversibly unfolds at ambient temperature. CONCLUSIONS/SIGNIFICANCE: Results obtained in this study suggest that coiled coil interaction between the C-terminal stalks of kinesin-II motor subunits is held together through a few hydrophobic and charged interactions. The N-terminal stalk segments are flexible and could uncoil reversibly during a motor walk. This supports the requirement for a flexible coiled coil association between the motor subunits, and its role in motor function needs to be elucidated.

  19. [Effects of cotton stalk biochar on microbial community structure and function of continuous cropping cotton rhizosphere soil in Xinjiang, China].

    Science.gov (United States)

    Gu, Mei-ying; Tang, Guang-mu; Liu, Hong-liang; Li, Zhi-qiang; Liu, Xiao-wei; Xu, Wan-li

    2016-01-01

    In this study, field trials were conducted to examine the effects of cotton stalk biochar on microbial population, function and structural diversity of microorganisms in rhizosphere soil of continuous cotton cropping field in Xinjiang by plate count, Biolog and DGGE methods. The experiment was a factorial design with four treatments: 1) normal fertilization with cotton stalk removed (NPK); 2) normal fertilization with cotton stalk powdered and returned to field (NPKS); 3) normal fertilization plus cotton stalk biochar at 22.50 t · hm⁻² (NPKB₁); and 4) normal fertilization plus cotton stalk biochar at 45.00 t · hm⁻² (NPKB₂). The results showed that cotton stalk biochar application obviously increased the numbers of bacteria and actinomycetes in the rhizospheric soil. Compared with NPK treatment, the number of fungi was significantly increased in the NPKB₁treatment, but not in the NPKB₂ treatment. However, the number of fungi was generally lower in the biochar amended (NPKB₁, NPKB₂) than in the cotton stalk applied plots (NPKS). Application of cotton stalk biochar increased values of AWCD, and significantly improved microbial richness index, suggesting that the microbial ability of utilizing carbohydrates, amino acids and carboxylic acids, especially phenolic acids was enhanced. The number of DGGE bands of NPKB₂ treatment was the greatest, with some species of Gemmatimonadetes, Acidobacteria, Proteobacteria and Actinobacteria being enriched. UPGMC Cluster analysis pointed out that bacterial communities in the rhizospheric soil of NPKB₂ treatment were different from those in the NPK, NPKS and NPKB₁treatments, which belonged to the same cluster. These results indicated that application of cotton stalk biochar could significantly increase microbial diversity and change soil bacterial community structure in the cotton rhizosphere soil, thus improving the health of soil ecosystem.

  20. Structure of the Newcastle disease virus hemagglutinin-neuraminidase (HN) ectodomain reveals a four-helix bundle stalk

    Energy Technology Data Exchange (ETDEWEB)

    Yuan, Ping; Swanson, Kurt A.; Leser, George P.; Paterson, Reay G.; Lamb, Robert A.; Jardetzky, Theodore S. (Stanford-MED); (NWU)

    2014-10-02

    The paramyxovirus hemagglutinin-neuraminidase (HN) protein plays multiple roles in viral entry and egress, including binding to sialic acid receptors, activating the fusion (F) protein to activate membrane fusion and viral entry, and cleaving sialic acid from carbohydrate chains. HN is an oligomeric integral membrane protein consisting of an N-terminal transmembrane domain, a stalk region, and an enzymatically active neuraminidase (NA) domain. Structures of the HN NA domains have been solved previously; however, the structure of the stalk region has remained elusive. The stalk region contains specificity determinants for F interactions and activation, underlying the requirement for homotypic F and HN interactions in viral entry. Mutations of the Newcastle disease virus HN stalk region have been shown to affect both F activation and NA activities, but a structural basis for understanding these dual affects on HN functions has been lacking. Here, we report the structure of the Newcastle disease virus HN ectodomain, revealing dimers of NA domain dimers flanking the N-terminal stalk domain. The stalk forms a parallel tetrameric coiled-coil bundle (4HB) that allows classification of extensive mutational data, providing insight into the functional roles of the stalk region. Mutations that affect both F activation and NA activities map predominantly to the 4HB hydrophobic core, whereas mutations that affect only F-protein activation map primarily to the 4HB surface. Two of four NA domains interact with the 4HB stalk, and residues at this interface in both the stalk and NA domain have been implicated in HN function.

  1. ENVIRONMENTAL CONTROL OF STALK LENGTH IN THE BLOOM-FORMING, FRESHWATER BENTHIC DIATOM DIDYMOSPHENIA GEMINATA (BACILLARIOPHYCEAE)(1).

    Science.gov (United States)

    Kilroy, Cathy; Bothwell, Max

    2011-10-01

    Blooms of the freshwater stalked diatom Didymosphenia geminata (Lyngb.) M. Schmidt in A. Schmidt typically occur in oligotrophic, unshaded streams and rivers. Observations that proliferations comprise primarily stalk material composed of extracellular polymeric substances (EPS) led us to ask whether or not the production of excessive EPS is favored under nutrient-limited, high-light conditions. We conducted experiments in outdoor flumes colonized by D. geminata using water from the oligotrophic, D. geminata-affected Waitaki River, South Island, New Zealand, to determine the relationship between D. geminata stalk length, cell division rates, and light intensity under ambient and nutrient-enriched conditions. Stalk lengths were measured in situ, and cell division rates were estimated as the frequency of dividing cells (FDC). FDC responded positively to increasing light intensity and to nutrient additions (N+P and P). Under ambient conditions, stalk length increased as light level increased except at low ambient light levels and temperature. Nutrient enrichment resulted in decreased stalk length and negative correlations with FDC, with this effect most evident under high light. Our results are consistent with the hypothesis that extensive stalk production in D. geminata occurs when cell division rates are nutrient limited and light levels are high. Thus, photosynthetically driven EPS production in the form of stalks, under nutrient-limited conditions, may explain the development of very high biomass in this species in oligotrophic rivers. The responses of FDC and stalk length under nutrient-replete conditions are also consistent with occurrences of D. geminata as a nondominant component of mixed periphyton communities in high-nutrient streams. © 2011 Phycological Society of America.

  2. Biochemical and Molecular Dynamic Simulation Analysis of a Weak Coiled Coil Association between Kinesin-II Stalks

    Science.gov (United States)

    Doodhi, Harinath; Jana, Swadhin C.; Devan, Pavithra; Mazumdar, Shyamalava; Ray, Krishanu

    2012-01-01

    Definition Kinesin-2 refers to the family of motor proteins represented by conserved, heterotrimeric kinesin-II and homodimeric Osm3/Kif17 class of motors. Background Kinesin-II, a microtubule-based anterograde motor, is composed of three different conserved subunits, named KLP64D, KLP68D and DmKAP in Drosophila. Although previous reports indicated that coiled coil interaction between the middle segments of two dissimilar motor subunits established the heterodimer, the molecular basis of the association is still unknown. Methodology/Principal Findings Here, we present a detailed heterodimeric association model of the KLP64D/68D stalk supported by extensive experimental analysis and molecular dynamic simulations. We find that KLP64D stalk is unstable, but forms a weak coiled coil heteroduplex with the KLP68D stalk when coexpressed in bacteria. Local instabilities, relative affinities between the C-terminal stalk segments, and dynamic long-range interactions along the stalks specify the heterodimerization. Thermal unfolding studies and independent simulations further suggest that interactions between the C-terminal stalk fragments are comparatively stable, whereas the N-terminal stalk reversibly unfolds at ambient temperature. Conclusions/Significance Results obtained in this study suggest that coiled coil interaction between the C-terminal stalks of kinesin-II motor subunits is held together through a few hydrophobic and charged interactions. The N-terminal stalk segments are flexible and could uncoil reversibly during a motor walk. This supports the requirement for a flexible coiled coil association between the motor subunits, and its role in motor function needs to be elucidated. PMID:23029351

  3. Indicators of climate change effects: Relationships between crown transparency and butt rot in silver fir (Abies alba Mill.) in Middle Italy

    Science.gov (United States)

    D'Aprile, Fabrizio; Tapper, Nigel

    2014-05-01

    Climatic analysis conducted on the trends and changes in temperature and rainfall during the 20th century in the Tuscan Apennine Alps (Middle Italy) have highlighted the possibility that these changes have a significant impact on the growth and/or health conditions or stress in silver fir (Abies alba Mill.). In this framework, identification of appropriate indicators to verify relationships between stress symptoms, which are frequently caused by climate adverse conditions, and pathological phenomena is a necessary step functional to the identification of climatic-environmental impacts on forests. The presence of butt rot pathology - a complex disease that causes rotting of the trunk internally - in silver fir is known the time as well as its severity. Nonetheless, very little research on the potential effects of changing climate conditions on the diffusion and intensity of butt rot seems available; thus, effects of climate change seem to be not excluded nor verified. No research or studies that quantify distribution and incidence or, especially, relationships of butt rot with adverse climatic and/or environmental factors were found. However, climatic alterations can have an impact on the intensity and spread of serious disease complexes and therefore it is of great importance to investigate the relationships between climate changing conditions, diffusion and incidence of butt rot in silver fir forests for their conservation and the management of species and biodiversity associated. As butt rot unlikely could be directly related to climate variables, crown transparency has been used as a proxy for tree growth, where climate variability is assumed to be the main driver of silver fir growth and stress. Actually, crown transparency is considered to be a main factor associated to tree growth, and healthier trees are assumed to grow faster than less-healthy trees. Thus, theoretically denser crowns would correspond to faster growing and healthier trees and indicate better

  4. Induction of broadly reactive anti-hemagglutinin stalk antibodies by an H5N1 vaccine in humans.

    Science.gov (United States)

    Nachbagauer, Raffael; Wohlbold, Teddy John; Hirsh, Ariana; Hai, Rong; Sjursen, Haakon; Palese, Peter; Cox, Rebecca J; Krammer, Florian

    2014-11-01

    Influenza virus infections are a major public health concern and cause significant morbidity and mortality worldwide. Current vaccines are effective but strain specific due to their focus on the immunodominant globular head domain of the hemagglutinin (HA). It has been hypothesized that sequential exposure of humans to hemagglutinins with divergent globular head domains but conserved stalk domains could refocus the immune response to broadly neutralizing epitopes in the stalk. Humans have preexisting immunity against H1 (group 1 hemagglutinin), and vaccination with H5 HA (also group 1)--which has a divergent globular head domain but a similar stalk domain--represents one such sequential-exposure scenario. To test this hypothesis, we used novel reagents based on chimeric hemagglutinins to screen sera from an H5N1 clinical trial for induction of stalk-specific antibodies by quantitative enzyme-linked immunosorbent assay (ELISA) and neutralization assays. Importantly, we also investigated the biological activity of these antibodies in a passive transfer in a mouse challenge model. We found that the H5N1 vaccine induced high titers of stalk-reactive antibodies which were biologically active and protective in the passive-transfer experiment. The induced response showed exceptional breadth toward divergent group 1 hemagglutinins but did not extend to group 2 hemagglutinins. These data provide evidence for the hypothesis that sequential exposure to hemagglutinins with divergent globular head domains but conserved stalk domains can refocus the immune response toward the conserved stalk domain. Furthermore, the results support the concept of a chimeric hemagglutinin universal influenza virus vaccine strategy that is based on the same principle. Influenza virus vaccines have to be reformulated and readministered on an annual basis. The development of a universal influenza virus vaccine could abolish the need for this cumbersome and costly process and would also enhance our

  5. Fusarium rot of onion and possible use of bioproduct

    Directory of Open Access Journals (Sweden)

    Klokočar-Šmit Zlata

    2008-01-01

    Full Text Available Several species of Fusarium are causal agents of onion rot in field and storage. Most prevalent are F. oxysporum f. sp. cepae and F. solani, and recently F. proliferatum, a toxigenic species. Most frequently isolated fungi in our field experiments were F. solani and F. proliferatum with different pathogenicity. Certain differences in antagonistic activity of Trichoderma asperellum on different isolates of F. proliferatum and F. solani have been found in in vitro study in dual culture, expressed as a slower inhibition of growth of the former, and faster of the latter pathogen. Antagonistic abilities of species from genus Trichoderma (T. asperellum are important, and have already been exploited in formulated biocontrol products in organic and conventional production, in order to prevent soil borne pathogens inducing fusarium wilt and rot. The importance of preventing onion infection by Fusarium spp., possible mycotoxin producers, has been underlined.

  6. Association of Pectolytic Fluorescent PSeudomonas with Postharvest Rots of Onion

    Directory of Open Access Journals (Sweden)

    H.H. El-Hendawy

    2004-12-01

    Full Text Available Five isolates of pectolytic fluorescent pseudomonads were obtained from a rotted onion bulb and identified as Pseudomonas marginalis. At both 4 and 25oC, all isolates caused soft rot to detached plant parts of onion and to carrot, celery, cucumber, pepper, spinach, tomato and turnip (but not garlic. They did not however cause any symptoms in living plants of these same species. These results suggest that the onion isolates are a postharvest pathogen which is not destructive in the field but becomes a threat to fresh vegetables stored at low-temperature. Analysis of cellulosolytic and pectic enzymes revealed that pectic lyases, but not polygalacturonases, pectin methyl esterases and cellulases were produced in culture by each isolate.

  7. Increased delignification by white rot fungi after pressure refining Miscanthus.

    Science.gov (United States)

    Baker, Paul W; Charlton, Adam; Hale, Mike D C

    2015-01-01

    Pressure refining, a pulp making process to separate fibres of lignocellulosic materials, deposits lignin granules on the surface of the fibres that could enable increased access to lignin degrading enzymes. Three different white rot fungi were grown on pressure refined (at 6 bar and 8 bar) and milled Miscanthus. Growth after 28 days showed highest biomass losses on milled Miscanthus compared to pressure refined Miscanthus. Ceriporiopsis subvermispora caused a significantly higher proportion of lignin removal when grown on 6 bar pressure refined Miscanthus compared to growth on 8 bar pressure refined Miscanthus and milled Miscanthus. RM22b followed a similar trend but Phlebiopsis gigantea SPLog6 did not. Conversely, C. subvermispora growing on pressure refined Miscanthus revealed that the proportion of cellulose increased. These results show that two of the three white rot fungi used in this study showed higher delignification on pressure refined Miscanthus than milled Miscanthus. Copyright © 2015 Elsevier Ltd. All rights reserved.

  8. The post-harvest fruit rots of tomato (Lycopersicum esculentum) in Nigeria.

    Science.gov (United States)

    Fajola, A O

    1979-01-01

    A survey of the post-harvest fruit rot diseases of tomato was conducted in five states of Nigeria. During severe infections, the diseases could cause 25% loss at harvest and 34% loss of the remaining product in transit, storage and market stalls; thus giving an overall loss of about 50% of the product. Two types of rots, soft and dry were recognised. The soft rot was found to account for about 85% and the dry rot about 15% of the overall loss. Erwinia carotovora, Rhizopus oryzae, R. stolonifer, Fusarium equiseti, F. nivale and F. oxysporum were established as the soft rot pathogens; while Aspergillus aculeatus, A. flavus, Cladosporium tenuissimum, Corynespora cassiicola, Curvularia lunata, Penicillium expansum P. multicolor and Rhizoctonia solani were established as the dry rot pathogens of tomato fruits in Nigeria.

  9. Biological Control of White Rot in Garlic Using Burkholderia pyrrocinia CAB08106-4

    Directory of Open Access Journals (Sweden)

    Kwang Seop Han

    2013-03-01

    Full Text Available White rot caused by Sclerotium cepivorum was reported to be severe soil-born disease on garlic. Disease progress of white rot of garlic (Allium sativum L. was investigated during the growing season of 2009 to 2011 at Taean and Seosan areas. The white rot disease on bulb began to occur from late April and peaked in late May. The antifungal bacteria, Burkholderia pyrrocinia CAB08106-4 was tested in field bioassay for suppression of white rot disease. As a result of the nucleotide sequence of the gene 16S rRNA, CAB008106-4 strain used in this study has been identified as B. pyrrocinia. B. pyrrocinia CAB080106-4 isolate suppressed the white rot with 69.6% control efficacy in field test. These results suggested that B. pyrrocinia CAB08106-4 isolate could be an effective biological control agent against white rot of garlic.

  10. Removal of phenanthrene in contaminated soil by combination of alfalfa, white-rot fungus, and earthworms.

    Science.gov (United States)

    Deng, Shuguang; Zeng, Defang

    2017-03-01

    The aim of this study was to investigate the removal of phenanthrene by combination of alfalfa, white-rot fungus, and earthworms in soil. A 60-day experiment was conducted. Inoculation with earthworms and/or white-rot fungus increased alfalfa biomass and phenanthrene accumulation in alfalfa. However, inoculations of alfalfa and white-rot fungus can significantly decrease the accumulation of phenanthrene in earthworms. The removal rates for phenanthrene in soil were 33, 48, 66, 74, 85, and 93% under treatments control, only earthworms, only alfalfa, earthworms + alfalfa, alfalfa + white-rot fungus, and alfalfa + earthworms + white-rot fungus, respectively. The present study demonstrated that the combination of alfalfa, earthworms, and white-rot fungus is an effective way to remove phenanthrene in the soil. The removal is mainly via stimulating both microbial development and soil enzyme activity.

  11. Fungal hydroquinones contribute to brown rot of wood

    Science.gov (United States)

    Melissa R. Suzuki; Christopher G. Hunt; Carl J. Houtman; Zachary D. Dalebroux; Kenneth E. Hammel

    2006-01-01

    The fungi that cause brown rot of wood initiate lignocellulose breakdown with an extracellular Fenton system in which Fe2+ and H2O2 react to produce hydroxyl radicals (•OH), which then oxidize and cleave the wood holocellulose. One such fungus, Gloeophyllum trabeum, drives Fenton chemistry on defined media by reducing Fe3+ and O2 with two extracellular hydroquinones,...

  12. Trichoderma spp. decrease Fusarium root rot in common bean

    Directory of Open Access Journals (Sweden)

    Hudson Teixeira

    2012-12-01

    Full Text Available The effectiveness of six Trichoderma-based commercial products (TCP in controlling Fusarium root rot (FRR in common bean was assessed under field conditions. Three TCP, used for seed treatment or applied in the furrow, increased seedling emergence as much as the fungicide fludioxonil. FRR incidence was not affected, but all TCP and fludioxonil reduced the disease severity, compared to control. Application of Trichoderma-based products was as effective as that of fludioxonil in FRR management.

  13. The presence and survival of soft rot (Erwinia) in flower bulb production systems

    OpenAIRE

    Doorn, van, J.; Vreeburg, P.J.M.; Leeuwen, van, P.J.; Dees, R.H.L.

    2011-01-01

    Soft rot is causing increasing damage in the flower bulb industry. Bulbous ornamentals such as Hyacinthus, Dahlia, Iris, Muscari, Freesia and Zantedeschia can be infected. Soft rot in flower bulbs is mainly caused by Dickeya spp. (Dickeya spp.) and Erwinia carotovora subsp. carotovora (Pectobacterium carotovorum spp. carotovorum).To identify and detect these soft rot bacterial species in several bulbous ornamentals, standard PCR methods were used. During the last four years, research was dire...

  14. Cellulose Degradation by Cellulose-Clearing and Non-Cellulose-Clearing Brown-Rot Fungi

    OpenAIRE

    Highley, Terry L.

    1980-01-01

    Cellulose degradation by four cellulose-clearing brown-rot fungi in the Coniophoraceae—Coniophora prasinoides, C. puteana, Leucogyrophana arizonica, and L. olivascens—is compared with that of a non-cellulose-clearing brown-rot fungus, Poria placenta. The cellulose- and the non-cellulose-clearing brown-rot fungi apparently employ similar mechanisms to depolymerize cellulose; most likely a nonenzymatic mechanism is involved.

  15. Fungi associated with storage rots of cocoyams (Colocasia spp.) in Nsukka, Nigeria.

    Science.gov (United States)

    Ugwuanyi, J O; Obeta, J A

    1996-04-01

    Cocoyam (Colocasia spp.) corms and cormels showing spoilage symptoms were collected from many stores in Nsukka locality and examined for rot and associated fungal pathogens. Aspergillus niger, Botryodiplodia theobromae, Corticium rolfsii, Geotrichum candidum, Fusarium oxysporum, and F. solani were recovered from rotten cocoyams. The representative isolates of these species caused cocoyam rot in pathogenicity tests. The rot due to A. niger, B. theobromae and C. rolfsii was extensive resulting in complete maceration of cocoyam tissue. Potassium sorbate (0.1 mg/ml) protected cocoyams from fungal rot with the exception of C. rolfsii.

  16. Effect of Preserving the Pituitary Stalk During Resection of Craniopharyngioma in Children on the Diabetes Insipidus and Relapse Rates and Long-Term Outcomes.

    Science.gov (United States)

    Cheng, Jing; Fan, Yanqin; Cen, Bo

    2017-09-01

    The objective of this study was to investigate the effect of preserving an infiltrated pituitary stalk during the resection of craniopharyngioma of pituitary stalk origin on postoperative outcomes and thus provide a theoretical basis for microsurgical treatment and prognosis. We screened the clinical data of all 103 pediatric patients with craniopharyngioma undergoing surgical treatment at our department between January 2006 and January 2013 and conducted a retrospective analysis of 82 patients with craniopharyngioma originating in the pituitary stalk. The patients were followed up from 12 months to 8 years. We analyzed the effect of preserving the pituitary stalk on the early and persistent diabetes insipidus rates, postoperative relapse rate, and mortality. In the total resection group (n = 67), the early and persistent diabetes insipidus rates were significantly lower in the 46 patients (68.7%) with a pituitary stalk than in those whose pituitary stalk was removed (P  0.05). In the subtotal resection group (n = 15), a significant difference was observed in the early and persistent diabetes insipidus rates (P  0.05). For children with craniopharyngioma of pituitary stalk origin, preserving the pituitary stalk has a significant effect on the early and persistent diabetes insipidus rates. When intraoperative exploration showed excessive adhesion between the tumor and pituitary stalk, we opted to preserve the pituitary stalk, which significantly reduced the early and persistent postoperative diabetes insipidus rates, without significantly increasing the relapse or mortality rate.

  17. Mesoporous activated carbon from corn stalk core for lithium ion batteries

    Science.gov (United States)

    Li, Yi; Li, Chun; Qi, Hui; Yu, Kaifeng; Liang, Ce

    2018-04-01

    A novel mesoporous activated carbon (AC) derived from corn stalk core is prepared via a facile and effective method which including the decomposition and carbonization of corn stalk core under an inert gas atmosphere and further activation process with KOH solution. The mesoporous activated carbon (AC) is characterized by X-ray diffraction (XRD), Raman spectroscopy, scanning electron microscopy (SEM), transmission electron microscopy (TEM) and Brunauer-Emmett-Teller (BET) measurements. These biomass waste derived from activated carbon is proved to be promising anode materials for high specific capacity lithium ion batteries. The activated carbon anode possesses excellent reversible capacity of 504 mAh g-1 after 100 cycles at 0.2C. Compared with the unactivated carbon (UAC), the electrochemical performance of activated carbon is significantly improved due to its mesoporous structure.

  18. Adsorption of hexavalent chromium on modified corn stalk using different cross-linking agents

    Science.gov (United States)

    Chen, Suhong; Zhu, Yi; Han, Zhijun; Feng, Gao; Jia, Yuling; Fu, Kaifang; Yue, Qinyan

    2017-12-01

    In this study, four different types of adsorbents modified from corn stalk were synthesized after the reaction with epichlorohydrin, N,N-dimethylformamide, triethylamine and different cross-linking agents. The surface functional groups and thermal stability of modified corn stalk (MCSs) were characterized using FTIR and TG analysis, respectively. The feasibility of using MCSs to remove Cr(VI) were evaluated. Adsorption isotherms were determined and modeled with Langmuir, Freundlich and Temkin equations. The experimental results showed that MCS modified using diethylenetriamine (DETA) had the best modification effect, and the adsorption capacity of Cr(VI) reached as high as 227.27 mg/g at 323 K. Thermodynamic study showed that the Cr(VI) adsorption onto MCSs was endothermic processes. As a result, MCS by using DETA as cross-linking agent has good potential for the removal of Cr(VI) from aqueous solutions.

  19. Transport effect of Vorticella's stalk contraction cycle is more effective for motile food particles

    Science.gov (United States)

    Ryu, Sangjin; Zhou, Jiazhong; Admiraal, David

    2017-11-01

    The coiling stalk of Vorticella contracts in a few milliseconds and then relaxes over a few seconds. During this cycle, the cell body (zooid) of this sessile protozoan is translated toward and then away from the no-slip substrate to which Vorticella is attached. As a result, the surrounding water flows with a maximum Reynolds number of 1 and transport effect seems to be caused by asymmetry in the flow field between the contraction and relaxation phases, and it appears to be more effective on motile food particles than non-motile ones. Therefore, our Vorticella model enabled investigating the hypothesis that Vorticella's stalk contraction can enhance food transport near the substrate. This study was supported by UNL Layman Seed Grant and Nebraska EPSCoR First Award.

  20. Stalk yield of sugarcane cultivars under different water regimes by subsurface drip irrigation

    Directory of Open Access Journals (Sweden)

    Aderson S. de Andrade Junior

    Full Text Available ABSTRACT This study aimed to evaluate the stalk yield of ten sugarcane cultivars (RB962962, RB931011, RB931530, RB98710, RB92579, RB867515, RB863129, SP791011, RB72545 and VAT90212 subjected to water deficit, full irrigation and water surplus by subsurface drip irrigation, during three cropping seasons (2011-2014. The experiment was conducted at the Experimental Field of Embrapa Meio-Norte, Teresina, Piauí State, Brazil, in dystrophic Red Yellow Argisol. The cultivars RB962962 (162.3 Mg ha-1 and RB867515 (158.5 Mg ha-1 have better stalk yield compared with other cultivars in all water regimes and cropping seasons.

  1. Microstructure and nanomechanical properties of single stalks from diatom Didymosphenia geminata and their change due to adsorption of selected metal ions.

    Science.gov (United States)

    Zgłobicka, Izabela; Chlanda, Adrian; Woźniak, Michał; Łojkowski, Maciej; Szoszkiewicz, Robert; Mazurkiewicz-Pawlicka, Marta; Święszkowski, Wojciech; Wyroba, Elżbieta; Kurzydłowski, Krzysztof J

    2017-08-01

    We present topographical and nanomechanical characterization of single Didymosphenia geminata stalk. We compared the samples before and after adsorption of metal ions from freshwater samples. Transmission electron microscopy studies of single stalk cross-sections have shown three distinct layers and an additional thin extra coat on the external layer (called "EL"). Using scanning electron microscopy and atomic force microscopy (AFM), we found that topography of single stalks after ionic adsorption differed significantly from topography of pristine stalks. AFM nanoindentation studies in ambient conditions yielded elastic moduli of 214 ± 170 MPa for pristine stalks and 294 ± 108 MPa for stalks after ionic adsorption. Statistical tests showed that those results were significantly different. We conducted only preliminary comparisons between ionic adsorption of several stalks in air and in water. While the stalks with ions were on average stiffer than the pristine stalks in air, they became more compliant than the pristine stalks in water. We also heated the stalks and detected EL softening at 50°C ± 15°C. AFM nanoindentation in air on the softened samples yielded elastic moduli of 26 ± 9 MPa for pristine samples and 43 ± 22 MPa for stalks with absorbed metal ions. Substantial decrease of the EL elastic moduli after heating was expected. Significantly different elastic moduli for the samples after ionic adsorption in both cases (i.e., for heated and nonheated samples), as well as behavior of the stalks immersed in water, point to permanent structural EL changes due to ions. © 2017 Phycological Society of America.

  2. Preparation of nitrogen-doped cotton stalk microporous activated carbon fiber electrodes with different surface area from hexamethylenetetramine-modified cotton stalk for electrochemical degradation of methylene blue

    Science.gov (United States)

    Li, Kunquan; Rong, Zhang; Li, Ye; Li, Cheng; Zheng, Zheng

    Cotton-stalk activated carbon fibers (CSCFs) with controllable micropore area and nitrogen content were prepared as an efficient electrode from hexamethylenetetramine-modified cotton stalk by steam/ammonia activation. The influence of microporous area, nitrogen content, voltage and initial concentration on the electrical degradation efficiency of methylene blue (MB) was evaluated by using CSCFs as anode. Results showed that the CSCF electrodes exhibited excellent MB electrochemical degradation ability including decolorization and COD removal. Increasing micropore surface area and nitrogen content of CSCF anode leaded to a corresponding increase in MB removal. The prepared CSCF-800-15-N, which has highest N content but lowest microporous area, attained the best degradation effect with 97% MB decolorization ratio for 5 mg/L MB at 12 V in 4 h, implying the doped nitrogen played a prominent role in improving the electrochemical degradation ability. The electrical degradation reaction was well described by first-order kinetics model. Overall, the aforesaid findings suggested that the nitrogen-doped CSCFs were potential electrode materials, and their electrical degradation abilities could be effectively enhanced by controlling the nitrogen content and micropore surface area.

  3. Globular Head-Displayed Conserved Influenza H1 Hemagglutinin Stalk Epitopes Confer Protection against Heterologous H1N1 Virus.

    Directory of Open Access Journals (Sweden)

    Miriam Klausberger

    Full Text Available Significant genetic variability in the head region of the influenza A hemagglutinin, the main target of current vaccines, makes it challenging to develop a long-lived seasonal influenza prophylaxis. Vaccines based on the conserved hemagglutinin stalk domain might provide broader cross-reactive immunity. However, this region of the hemagglutinin is immunosubdominant to the head region. Peptide-based vaccines have gained much interest as they allow the immune system to focus on relevant but less immunogenic epitopes. We developed a novel influenza A hemagglutinin-based display platform for H1 hemagglutinin stalk peptides that we identified in an epitope mapping assay using human immune sera and synthetic HA peptides. Flow cytometry and competition assays suggest that the identified stalk sequences do not recapitulate the epitopes of already described broadly neutralizing stalk antibodies. Vaccine constructs displaying 25-mer stalk sequences provided up to 75% protection from lethal heterologous virus challenge in BALB/c mice and induced antibody responses against the H1 hemagglutinin. The developed platform based on a vaccine antigen has the potential to be either used as stand-alone or as prime-vaccine in combination with conventional seasonal or pandemic vaccines for the amplification of stalk-based cross-reactive immunity in humans or as platform to evaluate the relevance of viral peptides/epitopes for protection against influenza virus infection.

  4. Globular Head-Displayed Conserved Influenza H1 Hemagglutinin Stalk Epitopes Confer Protection against Heterologous H1N1 Virus.

    Science.gov (United States)

    Klausberger, Miriam; Tscheliessnig, Rupert; Neff, Silke; Nachbagauer, Raffael; Wohlbold, Teddy John; Wilde, Monika; Palmberger, Dieter; Krammer, Florian; Jungbauer, Alois; Grabherr, Reingard

    2016-01-01

    Significant genetic variability in the head region of the influenza A hemagglutinin, the main target of current vaccines, makes it challenging to develop a long-lived seasonal influenza prophylaxis. Vaccines based on the conserved hemagglutinin stalk domain might provide broader cross-reactive immunity. However, this region of the hemagglutinin is immunosubdominant to the head region. Peptide-based vaccines have gained much interest as they allow the immune system to focus on relevant but less immunogenic epitopes. We developed a novel influenza A hemagglutinin-based display platform for H1 hemagglutinin stalk peptides that we identified in an epitope mapping assay using human immune sera and synthetic HA peptides. Flow cytometry and competition assays suggest that the identified stalk sequences do not recapitulate the epitopes of already described broadly neutralizing stalk antibodies. Vaccine constructs displaying 25-mer stalk sequences provided up to 75% protection from lethal heterologous virus challenge in BALB/c mice and induced antibody responses against the H1 hemagglutinin. The developed platform based on a vaccine antigen has the potential to be either used as stand-alone or as prime-vaccine in combination with conventional seasonal or pandemic vaccines for the amplification of stalk-based cross-reactive immunity in humans or as platform to evaluate the relevance of viral peptides/epitopes for protection against influenza virus infection.

  5. Measurement of the heat of smoldering combustion in straws and stalks by means of simultaneous thermal analysis

    Energy Technology Data Exchange (ETDEWEB)

    He, Fang; Yi, Weiming; Zha, Jianwen [School of Light Industry and Agricultural Engineering, Shandong University of Technology, Zibo, Shandong 255049 (China)

    2009-01-15

    In order to investigate reaction heat of agro-stalks smoldering, wheat straw, corn stalk, cotton stalk, millet straw, sorghum stalk and sweet potato rattan powder were smoldered and pyrolyzed in a simultaneous thermal analyzer (STA). The samples were placed in a platinum crucible (5 mm x 5 mm) with a lid (with a 1 mm hole) on a high-accuracy differential scanning calorimetry-heat capacity (DSC-cp) holder in the furnace of an STA and heated from 303 to 1073 K at a heating rate of 10 K min{sup -1}. Sweeping gas with a flow rate of 25 ml min{sup -1} was air and nitrogen during smoldering and pyrolysis, respectively. Results showed that the heat emission characteristic of the smoldering process differed remarkably from the pyrolysis process. Based on the analysis of the DSC curves, oxidative polymer degradation heat and char oxidation heat were obtained from experimental data. It showed that the oxidative polymer degradation heat of the agro-stalks is more than 6.92 MJ kg{sup -1} consumed matter, higher than that of cellulose paper. And char oxidation heat is around 23 MJ kg{sup -1} consumed matter, similar to that of cellulose paper, but higher than that of cigarette. Total net heat emission of smoldering in STA was also obtained. These data can be used as reference data in analyzing smoldering of agro-stalks under similar conditions. (author)

  6. Corn stalk as matrix in decomposting toilet for treating urine and feces

    Science.gov (United States)

    Sintawardani, N.; Nilawati, D.; Astuti, J. T.

    2017-03-01

    Bio-Toilet technology (BT) which is appropriate for the habits of Indonesian people has been studied and developed. BT is a dry toilet technology commonly uses ligno-cellulosic waste materials as matrix to facilitate the growth of natural microbes. In aerobic condition, microbes degrade feces and urine. Mineral as the leftover of feces and urine, such as nitrogen (N), phosphorus (P), and potassium (K) remain in the rest of matrix waste. After certain period. matrix can be harvested and used as soil conditioner. BT uses much less water, mobile, and very useful to be applied in areas where water availability is limited. BT type with different capacities, user amounts and mixing systems has been developed using sawdust for matrix. Since corn stalk is categorized as useless and priceless waste, its application in BT is challenging. Performance of BT with corn stalk as matrix to degrade feces and urine of carnivore imitating the human waste was observed. BT M-15 manual mixing type with paddle was filled with chopped corn stalk as much as 45% of total volume. This BT was designed for 15 person as users per day if 80% reactor volume was filled with ligno-cellulosic matrix. It is assumed that 150 g of feces are discharged once per person/day and 1000 mL of urine 6-8 times per day. Start up process was made in the beginning to initialize the needed microbes in the reactor (matrix). The discharge of feces and urine were increased slowly and gradually the users were increased from 1 to 4 users per day. Performance of BT was indicated by the change in the pile that showed by moisture content, temperature and pH. C/N ratio in matrix decreased significantly from 43 to 17. This result showed that the corn stalk could be used as matrix in BT.

  7. LOFT reactor vessel 2900 downcomer stalk instrument penetration flange stress analysis

    International Nuclear Information System (INIS)

    Finicle, D.P.

    1978-01-01

    The LOFT Reactor Vessel 290 0 Downcomer Stalk Instrument Penetration Flange Stress Analysis has been completed using normal operational and blowdown loading. A linear elastic analysis was completed using simplified hand analysis techniques. The analysis was in accordance with the 1977 ASME Boiler and Pressure Vessel Code, Section III, for a Class 1 component. Loading included internal pressure, bolt preload, and thermal gradients due to normal operating and blowdown

  8. Critical and direct involvement of the CD23 stalk region in IgE binding.

    Science.gov (United States)

    Selb, Regina; Eckl-Dorna, Julia; Twaroch, Teresa E; Lupinek, Christian; Teufelberger, Andrea; Hofer, Gerhard; Focke-Tejkl, Margarete; Gepp, Barbara; Linhart, Birgit; Breiteneder, Heimo; Ellinger, Adolf; Keller, Walter; Roux, Kenneth H; Valenta, Rudolf; Niederberger, Verena

    2017-01-01

    The low-affinity receptor for IgE, FcεRII (CD23), contributes to allergic inflammation through allergen presentation to T cells, regulation of IgE responses, and enhancement of transepithelial allergen migration. We sought to investigate the interaction between CD23, chimeric monoclonal human IgE, and the corresponding birch pollen allergen Bet v 1 at a molecular level. We expressed 4 CD23 variants. One variant comprised the full extracellular portion of CD23, including the stalk and head domain; 1 variant was identical with the first, except for an amino acid exchange in the stalk region abolishing the N-linked glycosylation site; and 2 variants represented the head domain, 1 complete and 1 truncated. The 4 CD23 variants were purified as monomeric and structurally folded proteins, as demonstrated by gel filtration and circular dichroism. By using a human IgE mAb, the corresponding allergen Bet v 1, and a panel of antibodies specific for peptides spanning the CD23 surface, both binding and inhibition assays and negative stain electron microscopy were performed. A hitherto unknown IgE-binding site was mapped on the stalk region of CD23, and the non-N-glycosylated monomeric version of CD23 was superior in IgE binding compared with glycosylated CD23. Furthermore, we demonstrated that a therapeutic anti-IgE antibody, omalizumab, which inhibits IgE binding to FcεRI, also inhibited IgE binding to CD23. Our results provide a new model for the CD23-IgE interaction. We show that the stalk region of CD23 is crucially involved in IgE binding and that the interaction can be blocked by the therapeutic anti-IgE antibody omalizumab. Copyright © 2016 The Authors. Published by Elsevier Inc. All rights reserved.

  9. Spontaneous intermittent MRI changes of a pituitary stalk lesion causing diabetes insipidus and amenorrhea.

    Science.gov (United States)

    Curtò, Lorenzo; Trimarchi, Francesco; Cannavo, Salvatore

    2017-04-01

    Lymphocytic infundibulo-neurohypophysitis is a rare disorder. We report the case of a 29 year-old woman with diabetes insipidus and amenorrhea, in whom the magnetic resonance imaging demonstration of a pituitary stalk lesion was intermittent. We suggest that, in patients with endocrine dysfunction and positivity of circulating antipituitary antibodies at high title, magnetic resonance imaging should be repeated after few months, if negative.

  10. [Obscene telephone calls--relations to paraphilias, paraphilia related disorders and stalking].

    Science.gov (United States)

    Briken, Peer; Hill, Andreas; Nika, Evangelia; Berner, Wolfgang

    2005-09-01

    Little is known about the aetiology, course and therapy of obscene telephone calls as a paraphilic behaviour. Overlaps to other paraphilias like voyeurism, paraphilia related disorders and the concept of stalking are reported in the literature. In case reports we describe the paraphilic development and course with a focus on the relationship to the victim. We discuss this on the background of different concepts regarding risk assessment and therapy.

  11. Diabetes insipidus associated with a thickened pituitary stalk in a case of Langerhans Cell Histiocytosis

    Science.gov (United States)

    Redhu, Rakesh; Nadkarni, Trimurti; Mahesh, R.

    2011-01-01

    Diabetes insipidus (DI) associated with a thickened pituitary stalk is a diagnostic challenge in the pediatric population. Langerhans Cell Histiocytosis (LCH) is a rare cause of this entity. A 4-year-old male child presented with central DI of 1-year duration, associated with a thickened pituitary stalk. The etiology for the same remained elusive as the patient had no other manifestation to suggest LCH. A year later, the patient developed a left frontal scalp swelling. Neuroradiology demonstrated multiple punched out osteolytic lesions in both the frontal bones. The infundibulum was thickened and showed post-contrast enhancement. Histology and immunohistochemistry (IHC) of the biopsy specimen confirmed LCH. The child was administered chemotherapy according to LCH protocol, which resulted in 33% reduction in the size of the skull lesions. The DI was controlled with medical management. The present case highlights the need for serial follow-up and magnetic resonance (MR) imaging that led to a diagnosis of LCH. The clinical presentation and management of central DI and a thickened pituitary stalk is presented and the relevant literature is discussed. PMID:21977093

  12. Use of grape stalk, a waste of the viticulture industry, to obtain activated carbon.

    Science.gov (United States)

    Deiana, A C; Sardella, M F; Silva, H; Amaya, A; Tancredi, N

    2009-12-15

    Grape stalk is an organic waste produced in great amounts in the industrialization processes of grape. This work presents the results of studies carried out to use this waste as raw material to prepare activated carbon through the physical and chemical route. The physicochemical characterization of this material suggests the presence of unusually high levels of ashes. Metal content was determined and high levels of potassium, sodium, iron, calcium and magnesium in carbonized and raw grape stalk were exhibited. This characteristic made difficult physical activation at high temperatures. A leaching step was included before the activation with steam, and adsorbents with surface areas between 700 and 900 m(2)/g were obtained. Physical activation was also performed at lower temperatures using carbonized grape stalk without leaching, leading to the development of some grade of porosity, with an area of 412 m(2)/g. These results would indicate the catalytic effect of the minerals present in this raw material. Chemical activation using phosphoric acid as activating agent seemed to be a very efficient method as final products with BET areas between 1000 and 1500 m(2)/g were obtained.

  13. High pressure assist-alkali pretreatment of cotton stalk and physiochemical characterization of biomass.

    Science.gov (United States)

    Du, Shuang-kui; Zhu, Xinna; Wang, Hua; Zhou, Dayun; Yang, Weihua; Xu, Hongxia

    2013-11-01

    Ground cotton stalks were pretreated with sodium hydroxide (NaOH) at concentrations of 1-4% (w/v), pressures of 30-130 kPa, durations of 15-75 min, and liquid/solid ratios of 10:1-30:1. Modeling of the high pressure assist-alkali pretreatment (HPAP) of cotton stalk was attempted. The levels of NaOH concentration, pressure, and duration were optimized using a Box-Behnken design to enhance the cellulose content of treated solid residue. The optimum pretreatment conditions were as follows: liquid/solid ratio, 20:1; pressure, 130 kPa; NaOH concentration, 3.0%; duration, 40 min. During the conditions, cellulose content of pretreated cotton stalk residue was 64.07%. The maximum cellulose conversion of 45.82% and reducing sugar yield of 0.293 g/g upon hydrolysis were obtained. Significant differences were observed in biomass composition and physiochemical characteristics between native and alkali-treated biomass. High NaOH concentration and pressure were conducive to lignin dissolution and resulted in increased cellulose content and conversion. Copyright © 2013 Elsevier Ltd. All rights reserved.

  14. Adjuvants and immunization strategies to induce influenza virus hemagglutinin stalk antibodies.

    Directory of Open Access Journals (Sweden)

    Peter H Goff

    Full Text Available The global population remains vulnerable in the face of the next pandemic influenza virus outbreak, and reformulated vaccinations are administered annually to manage seasonal epidemics. Therefore, development of a new generation of vaccines is needed to generate broad and persistent immunity to influenza viruses. Here, we describe three adjuvants that enhance the induction of stalk-directed antibodies against heterologous and heterosubtypic influenza viruses when administered with chimeric HA proteins. Addavax, an MF59-like nanoemulsion, poly(I:C, and an RNA hairpin derived from Sendai virus (SeV Cantell were efficacious intramuscularly. The SeV RNA and poly(I:C also proved to be effective respiratory mucosal adjuvants. Although the quantity and quality of antibodies induced by the adjuvants varied, immunized mice demonstrated comparable levels of protection against challenge with influenza A viruses on the basis of HA stalk reactivity. Finally, we present that intranasally, but not intramuscularly, administered chimeric HA proteins induce mucosal IgA antibodies directed at the HA stalk.

  15. Innovative Prototype for Separate Harvesting of Cynara Cardunculus Achenes and Stalks

    Energy Technology Data Exchange (ETDEWEB)

    Pari, L.; Fedrizzi, M.; Pansini, L. (Consiglio per la Ricerca e la Sperimentazione in Agricoltura, Unita di Ricerca per l' Ingegneria Agraria, Monterotondo, RM (Italy))

    2008-10-15

    The CRA-ING took part to the Cynara cardunculus harvesting tests organized in Spain in 2007, where UPM has experimental cultivations in the Instituto Madrileno de Investigacion y Desarrollo Rural, Agrario y Alimentario (IMIDRA) de la Consejeria de Economia y Innovacion Tecnologica de la Comunidad de Madrid in El Encin, near Alcala De Henarez. The harvesting tests were carried out in week 33 (August 13th-17th); the cultivation was found part in good condition of maturity, part still not ready for harvesting. The test was carried out on the dried part of the crops. The tests aimed at evaluating a new mechanical equipment (head) working connected to a selfpropelled combine for separated harvesting of the different fractions obtainable by the cultivation assigned to different transformation: oil extraction from seeds and energy production from epigeous biomass combustion. During the tests carried out in 2006 in Portugal and Spain, it was observed how a combine harvester with a maize head was able to separate the seed with good accuracy. Likewise the difficulty of collecting the lignocellulosic fraction after its passage was highlighted. A combine with a wheat head could cut the stalk in an appropriate height range, but could not separate the head from the stalk. A sunflower head cut the capitula, but not the stalk. The project concept, supplied to a Firm that already builds heads for maize, wheat, sunflowers, soybean and so on, included the upper devices of a maize head and a classic wheat head (without the paddle wheel) in the lower part, to obtain capitula detachment and effective threshing and, at the same time, the stalk cut. Some modifications were specified to allow the cut of the stalk next to the ground and its successive tier in the space between the front wheels, where the discharge system of the threshing device would then provide to drop the remains of the capitula threshing. The basic concept of the machine, to separate and thresh the capitula and to drop

  16. Two previously unknown Phytophthora species associated with brown rot of Pomelo (Citrus grandis fruits in Vietnam.

    Directory of Open Access Journals (Sweden)

    Ivana Puglisi

    Full Text Available Two distinct Phytophthora taxa were found to be associated with brown rot of pomelo (Citrus grandis, a new disease of this ancestral Citrus species, in the Vinh Long province, Mekong River Delta area, southern Vietnam. On the basis of morphological characters and using the ITS1-5.8S-ITS2 region of the rDNA and the cytochrome oxidase subunit 1 (COI as barcode genes, one of the two taxa was provisionally named as Phytophthora sp. prodigiosa, being closely related to but distinct from P. insolita, a species in Phytophthora Clade 9, while the other one, was closely related to but distinct from the Clade 2 species P. meadii and was informally designated as Phytophthora sp. mekongensis. Isolates of P. sp. prodigiosa and P. sp. mekongensis were also obtained from necrotic fibrous roots of Volkamer lemon (C. volkameriana rootstocks grafted with 'King' mandarin (Citrus nobilis and from trees of pomelo, respectively, in other provinces of the Mekong River Delta, indicating a widespread occurrence of both Phytophthora species in this citrus-growing area. Koch's postulates were fulfilled via pathogenicity tests on fruits of various Citrus species, including pomelo, grapefruit (Citrus x paradisi, sweet orange (Citrus x sinensis and bergamot (Citrus x bergamia as well as on the rootstock of 2-year-old trees of pomelo and sweet orange on 'Carrizo' citrange (C. sinensis 'Washington Navel' x Poncirus trifoliata. This is the first report of a Phytophthora species from Clade 2 other than P. citricola and P. citrophthora as causal agent of fruit brown rot of Citrus worldwide and the first report of P. insolita complex in Vietnam. Results indicate that likely Vietnam is still an unexplored reservoir of Phytophthora diversity.

  17. Two previously unknown Phytophthora species associated with brown rot of Pomelo (Citrus grandis) fruits in Vietnam.

    Science.gov (United States)

    Puglisi, Ivana; De Patrizio, Alessandro; Schena, Leonardo; Jung, Thomas; Evoli, Maria; Pane, Antonella; Van Hoa, Nguyen; Van Tri, Mai; Wright, Sandra; Ramstedt, Mauritz; Olsson, Christer; Faedda, Roberto; Magnano di San Lio, Gaetano; Cacciola, Santa Olga

    2017-01-01

    Two distinct Phytophthora taxa were found to be associated with brown rot of pomelo (Citrus grandis), a new disease of this ancestral Citrus species, in the Vinh Long province, Mekong River Delta area, southern Vietnam. On the basis of morphological characters and using the ITS1-5.8S-ITS2 region of the rDNA and the cytochrome oxidase subunit 1 (COI) as barcode genes, one of the two taxa was provisionally named as Phytophthora sp. prodigiosa, being closely related to but distinct from P. insolita, a species in Phytophthora Clade 9, while the other one, was closely related to but distinct from the Clade 2 species P. meadii and was informally designated as Phytophthora sp. mekongensis. Isolates of P. sp. prodigiosa and P. sp. mekongensis were also obtained from necrotic fibrous roots of Volkamer lemon (C. volkameriana) rootstocks grafted with 'King' mandarin (Citrus nobilis) and from trees of pomelo, respectively, in other provinces of the Mekong River Delta, indicating a widespread occurrence of both Phytophthora species in this citrus-growing area. Koch's postulates were fulfilled via pathogenicity tests on fruits of various Citrus species, including pomelo, grapefruit (Citrus x paradisi), sweet orange (Citrus x sinensis) and bergamot (Citrus x bergamia) as well as on the rootstock of 2-year-old trees of pomelo and sweet orange on 'Carrizo' citrange (C. sinensis 'Washington Navel' x Poncirus trifoliata). This is the first report of a Phytophthora species from Clade 2 other than P. citricola and P. citrophthora as causal agent of fruit brown rot of Citrus worldwide and the first report of P. insolita complex in Vietnam. Results indicate that likely Vietnam is still an unexplored reservoir of Phytophthora diversity.

  18. Characterizing butt-rot fungi on USA-affiliated islands in the western Pacific

    Science.gov (United States)

    Phil Cannon; Ned B. Klopfenstein; Robert L. Schlub; Mee-Sook Kim; Yuko Ota; Norio Sahashi; Roland J. Quitugua; John W. Hanna; Amy L. Ross-Davis; J. D. Sweeney

    2014-01-01

    Ganoderma and Phellinus are genera that commonly cause tree butt-rot on USA-affiliated islands of the western Pacific. These fungal genera can be quite prevalent, especially in older mangrove stands. Although the majority of infections caused by these fungi lead to severe rotting of the heartwood, they typically do not directly kill the living tissues of the sapwood,...

  19. The persistence of Gliocephalotrichum bulbilium and G. simplex causing fruit rot of rambutan in Puerto Rico

    Science.gov (United States)

    Fruit rot of rambutan (Nephelium lappaceum L.) is a pre and post-harvest disease problem that affects fruit quality. Significant post-harvest losses have occurred worldwide and several pathogens have been identified in Malaysia, Costa Rica, Hawaii, Thailand, and Puerto Rico. In 2011, fruit rot was o...

  20. First report of Calonectria hongkongensis causing fruit rot of rambutan (Nephelium lappaceum L.)

    Science.gov (United States)

    Fruit rot is a major pre- and post-harvest disease problem in rambutan orchards. In 2011, fruit rot was observed at the USDA-TARS orchards in Mayaguez, Puerto Rico. Infected fruit were collected and tissue sections (1 mm2) were superficially sterilized with 70% ethanol and 0.5% sodium hypochlorite. ...

  1. First report of Colletotrichum fructicola and C. queenslandicum causing fruit rot of rambutan (Nephelium lappaceum L.)

    Science.gov (United States)

    In rambutan production, fruit rot is the main pre- and post-harvest disease of concern. In a 2008-2013 fruit disease survey, fruit rot was observed in eight orchards in Puerto Rico. Infected fruit were collected and 1 mm2 tissue sections were surface disinfested with 70% ethanol followed by 0.5% sod...

  2. Preparation and Characterization of Novolak Phenol Formaldehyde Resin from Liquefied Brown-Rotted Wood

    Science.gov (United States)

    Gai-Yun Li; Chung-Yun Hse; Te-Fu Qin

    2012-01-01

    The brown-rotted wood was liquefied in phenol with phosphoric acid as catalyst and the resulting liquefied products were condensed with formaldehyde to yield novolak liquefied wood-based phenol formaldehyde resin (LWPF). The results showed that brown-rotted wood could be more easily liquefied than sound wood in phenol. The residue content of liquefied wood decreased...

  3. Enzymatic oxalic acid regulation correlated with wood degradation in four brown-rot fungi

    Science.gov (United States)

    Anne Christine Steenkjær Hastrup; Frederick Green III; Patricia K. Lebow; Bo Jensen

    2012-01-01

    Oxalic acid is a key component in the initiation of brown-rot decay and it has been suggested that it plays multiple roles during the degradation process. Oxalic acid is accumulated to varying degrees among brown-rot fungi; however, details on active regulation are scarce. The accumulation of oxalic acid was measured in this study from wood degraded by the four brown-...

  4. Effect of irradiation and insect pest control on rots and sensory ...

    African Journals Online (AJOL)

    The coffee bean weevil, Araecerus fasciculatus Degeer (Coleoptera: Curculionidae) is associated with rots in stored yam tubers. The current study was designed to assess the effect of irradiation and other insect pest control strategies on rots and sensory quality of stored yams. 450 tubers each of two varieties of white yam ...

  5. Antifungal Effects Of Botanical Leaf Extracts On Tuber Rots Of Yam ...

    African Journals Online (AJOL)

    The fungicidal effects of dry and fresh leaf extracts of Axardirachta indica (L) and Ocimum grattissimum on the rot of yam tubers were investigated. Fusaruim oxysporium, Rhjzopus stolonifer, Botryodiplodia theobromae and Aspergillus Niger (root pathogens) were isolated from the rotted yam. Both dry and fresh leaf extracts ...

  6. Biocontrol of charcoal-rot of sorghum by actinomycetes isolated from ...

    African Journals Online (AJOL)

    use

    2011-12-12

    Dec 12, 2011 ... Streptomyces but with different species in BLAST analysis. This study indicates that the selected actinomycetes have the potential for PGP and control of charcoal-rot disease in sorghum. Key words: Antagonistic actinomycetes, biocontrol, charcoal-rot, Macrophomina phaseolina. INTRODUCTION.

  7. Potassium and Phosphorus effects on disease severity of charcoal rot of soybean

    Science.gov (United States)

    The effects of potassium (K) and phosphorus (P) fertilizers on charcoal rot of soybean [Glycine max (L.) Merr.] are unknown. Therefore, the severity of charcoal rot was studied at five levels of K (0, 37, 75, 111 and 149 kg K ha-1) and a level that was equal to the recommended fertilizer applicatio...

  8. Potassium and phosphorus have no effects on severity of charcoal rot of soybean

    Science.gov (United States)

    The effects of potassium (K) and phosphorus (P) fertilizers on charcoal rot of soybean [Glycine max (L.) Merr.] are unknown. Therefore, the severity of charcoal rot was studied at five levels of K (0, 37, 75, 111 and 149 kg K ha-1) and a level that was equal to the recommended fertilizer applicatio...

  9. Studies on the epidemiology of spear rot in oil palm (Elaeis guineensis Jacq.) in Suriname

    NARCIS (Netherlands)

    Lande, van de H.L.

    1993-01-01

    The epidemiology of spear rot, an infectious disease of unknown etiology, was studied over 10 years at three government-owned oil palm plantations in Suriname. As with other and similar diseases, amarelecimento fatal in Brazil and pudrición del cogollo in Latin America, which too show rot

  10. First Report of Calonectria hongkongensis Causing Fruit Rot of Rambutan (Nephelium lappaceum)

    NARCIS (Netherlands)

    Serrato-Diaz, L.M.; Latoni-Brailowsky, E.I.; Rivera-Vargas, L.I.; Goenaga, R.J.; Crous, P.W.; French-Monar, R.D.

    2013-01-01

    Fruit rot of rambutan is a pre- and post-harvest disease problem of rambutan orchards. In 2011, fruit rot was observed at USDA-ARS orchards in Mayaguez, Puerto Rico. Infected fruit were collected and 1 mm2 tissue sections were surface disinfested with 70% ethanol followed by 0.5% sodium

  11. Potential of bulb-associated bacteria for biocontrol of hyacinth soft rot caused by Dickeya zeae

    NARCIS (Netherlands)

    Jafra, S.; Przysowa, J.; Gwizdek-Wisniewska, A.; Wolf, van der J.M.

    2009-01-01

    Dickeya zeae is a pectinolytic bacterium responsible for soft rot disease in flower bulb crops. In this study, the possibility of controlling soft rot disease in hyacinth by using antagonistic bacteria isolated from hyacinth bulbs was explored. Bacterial isolates with potential for biocontrol were

  12. The presence and survival of soft rot (Erwinia) in flower bulb production systems

    NARCIS (Netherlands)

    Doorn, van J.; Vreeburg, P.J.M.; Leeuwen, van P.J.; Dees, R.H.L.

    2011-01-01

    Soft rot is causing increasing damage in the flower bulb industry. Bulbous ornamentals such as Hyacinthus, Dahlia, Iris, Muscari, Freesia and Zantedeschia can be infected. Soft rot in flower bulbs is mainly caused by Dickeya spp. (Dickeya spp.) and Erwinia carotovora subsp. carotovora

  13. Fungicide rotation schemes for managing Phytophthora fruit rot of watermelon across southeastern United States

    Science.gov (United States)

    Southeastern states produce about 50% of the watermelons in the United States (U.S.) where conditions are optimal for development of Phytophthora fruit rot prevail. Phytophthora fruit rot significantly limits watermelon production by causing serious yield losses to growers before and after harvest. ...

  14. Conversion of sorghum stover into animal feed with white-rot fungi ...

    African Journals Online (AJOL)

    Treatment of crop residues with some species of white-rot fungi can enhance the nutritive value. After the fungal treatment of sorghum (Sorghum bicolor) stover with two white-rot fungi in a solid state fermentation, the chemical composition and in vitro digestibility of the resultant substrate was determined. The results show a ...

  15. Interaction of Rhizoctonia solani and Rhizopus stolonifer Causing Root Rot of Sugar Beet

    Science.gov (United States)

    In recent years, growers in Michigan and other sugar beet production areas of the United States have reported increasing incidence of root rot with little or no crown or foliar symptoms in sugar beet with Rhizoctonia crown and root rot. In addition, Rhizoctonia-resistant beets have been reported wit...

  16. Conversion of sorghum stover into animal feed with white-rot fungi ...

    African Journals Online (AJOL)

    STORAGESEVER

    2010-03-15

    Mar 15, 2010 ... white-rot fungi: Pleurotus ostreatus and Pleurotus ... the fungal treatment of sorghum (Sorghum bicolor) stover with two white-rot fungi in a solid state ..... Rumen degradation and In vitro gas production parameters in some browse forages, grasses and maize stover from Kenya. J. Food Agric. Environ.

  17. The effect of long term storage on bacterial soft rot resistance in potato

    Science.gov (United States)

    Bacterial soft rot is a serious disease in potato (Solanum tuberosum L.), causing rapid tuber tissue maceration and, consequently, marketable yield loss. Soft rot bacteria, especially Pectobacterium carotovorum subsp. carotovorum (Pbc), are favored by moist conditions, which are prevalent in large p...

  18. Copper tolerance of brown-rot fungi : time course of oxalic acid production

    Science.gov (United States)

    Frederick Green; Carol A. Clausen

    2003-01-01

    The increase in the use of non-arsenical copper-based wood preservatives in response to environmental concerns has been accompanied by interest in copper-tolerant decay fungi. Oxalic acid production by brown-rot fungi has been proposed as one mechanism of copper tolerance. Fifteen brown-rot fungi representing the genera Postia, Wolfiporia, Meruliporia, Gloeophyllum,...

  19. Fungicides reduce Rhododendron root rot and mortality caused by Phytophthora cinnamomi, but not by P. plurivora

    Science.gov (United States)

    Rhododendron root rot, caused by several Phytophthora species, can cause devastating losses in nursery-grown plants. Most research on chemical control of root rot has focused on Phytophthora cinnamomi. However, it is unknown whether treatments recommended for P. cinnamomi are also effective for othe...

  20. Nonchemical, cultural management strategies to suppress phytophthora root rot in northern highbush blueberry

    Science.gov (United States)

    Phytophthora cinnamomi causes root rot of highbush blueberry and decreases plant growth, yield, and profitability for growers. Fungicides can suppress root rot, but cannot be used in certified organic production systems and fungicide resistance may develop. Alternative, non-chemical, cultural manag...

  1. Resistance to post-harvest microbial rot in yam: Integration of ...

    African Journals Online (AJOL)

    Post-harvest microbial rot is an important disease that causes severe losses in yam (Dioscorea spp.) storage. Rot from microbial infection of healthy yam tubers reduces their table quality and renders them unappealing to consumers. A study was carried out at Bimbilla in the Nanumba North District of Ghana to evaluate ...

  2. First report of in-vitro fludioxonil-resistant isolates of Fusarium spp. causing potato dry rot in Michigan

    Science.gov (United States)

    Fusarium dry rot of potato (Solanum tuberosum) is a postharvest disease caused by several Fusarium species and is of worldwide importance. Measures for controlling dry rot in storage are limited. Dry rot has been managed primarily by reducing tuber bruising, providing conditions for rapid wound heal...

  3. Moniliophthora roreri, causal agent of cacao frosty pod rot.

    Science.gov (United States)

    Bailey, Bryan A; Evans, Harry C; Phillips-Mora, Wilbert; Ali, Shahin S; Meinhardt, Lyndel W

    2017-12-01

    Taxonomy: Moniliophthora roreri (Cif.) H.C. Evans et al. ; Phylum Basidiomycota; Class Agaricomycetes; Order Agaricales; Family Marasmiaceae; Genus Moniliophthora. Biology: Moniliophthora roreri attacks Theobroma and Herrania species causing frosty pod rot. Theobroma cacao (cacao) is the host of major economic concern. Moniliophthora roreri is a hemibiotroph with a long biotrophic phase (45-90 days). Spore masses, of apparent asexual origin, are produced on the pod surface after initiation of the necrotrophic phase. Spores are spread by wind, rain and human activity. Symptoms of the biotrophic phase can include necrotic flecks and, in some cases, pod malformation, but pods otherwise remain asymptomatic. Relationship to Moniliophthora perniciosa: Moniliophthora roreri and Moniliophthora perniciosa, causal agent of witches' broom disease of cacao, are closely related. Their genomes are similar, including many of the genes they carry which are considered to be important in the disease process. Moniliophthora perniciosa, also a hemibiotroph, has a typical basidiomycete lifestyle and morphology, forming clamp connections and producing mushrooms. Basidiospores infect meristematic tissues including flower cushions, stem tips and pods. Moniliophthora roreri does not form clamp connections or mushrooms and infects pods only. Both pathogens are limited to the Western Hemisphere and are a threat to cacao production around the world. Agronomic importance: Disease losses caused by frosty pod rot can reach 90% and result in field abandonment. Moniliophthora roreri remains in the invasive phase in the Western Hemisphere, not having reached Brazil, some islands within the Caribbean and a few specific regions within otherwise invaded countries. The disease can be managed by a combination of cultural (for example, maintenance of tree height and removal of infected pods) and chemical methods. These methods benefit from regional application, but can be cost prohibitive. Breeding for

  4. Bacteriophages of Soft Rot Enterobacteriaceae-a minireview.

    Science.gov (United States)

    Czajkowski, Robert

    2016-01-01

    Soft rot Enterobacteriaceae (Pectobacterium spp. and Dickeya spp., formerly pectinolytic Erwinia spp.) are ubiquitous necrotrophic bacterial pathogens that infect a large number of different plant species worldwide, including economically important crops. Despite the fact that these bacteria have been studied for more than 50 years, little is known of their corresponding predators: bacteriophages, both lytic and lysogenic. The aim of this minireview is to critically summarize recent ecological, biological and molecular research on bacteriophages infecting Pectobacterium spp. and Dickeya spp. with the main focus on current and future perspectives in that field. © FEMS 2015. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  5. Serpula lacrymans, The Dry Rot Fungus and Tolerance Towards Copper-Based Wood Preservatives

    DEFF Research Database (Denmark)

    Hastrup, Anne Christine Steenkjær; Jensen, Bo; Clausen, Carol

    2005-01-01

    -rot fungi is thought to be due in part to oxalic acid production and accumulation. Oxalic acid has been implicated in copper tolerance by the formation of copper oxalate crystals. Twelve isolates of the dry rot fungus, S. lacrymans and four other brown rot species were evaluated for weight loss on wood......Serpula lacrymans (Wulfen : Fries) Schröter, the dry rot fungus, is considered the most (Wulfen : Fries) Schröterthe dry rot fungus, is considered the most economically important wood decay fungus in temperate regions of the world i.e. northern Europe, Japan and Australia. Previously copper based...... wood preservatives were the most commonly used preservatives for pressure treatment of wood for building constructions. Because of a suspicion about tolerance toward copper components, a soil block test was undertaken to clarify the effect of two copper based preservatives, copper citrate and ACQ...

  6. Decolourization potential of white-rot fungus Phanerochaete chrysosporium on synthetic dye bath effluent containing Amido black 10B

    Directory of Open Access Journals (Sweden)

    S. Senthilkumar

    2014-12-01

    Full Text Available Synthetic azo dyes are extensively used in textile industry and are not easily degraded into the environment due to their complex structure. Due to the low degree of fixation of these dyes to fabrics, more than 10–15% of the dye does not bind to fabrics during colour processing and release into water bodies as effluent cause serious environmental pollution. White-rot fungus is found to be capable of degrading lignin which has a complex structure similar to azo dyes. In this study, the decolourization potential of white-rot fungus Phanerochaete chrysosporium, which is capable of decolourizing synthetic dye bath effluent, was investigated. Maximum decolourization of 98% was achieved on the third day under normal conditions. The rate of decolourization carried out at different concentrations revealed that the increase in dye effluent concentration suppresses the percentage decolourization. The optimized amounts of nutrients were found to be 0.5%, 0.1% and 0.5% of glucose, manganese sulphate and ammonium salts, respectively. The addition of inducers such as starch and lignin increased enzyme production and the rate of decolourization.

  7. Kinetochore-microtubule attachment throughout mitosis potentiated by the elongated stalk of the kinetochore kinesin CENP-E.

    Science.gov (United States)

    Vitre, Benjamin; Gudimchuk, Nikita; Borda, Ranier; Kim, Yumi; Heuser, John E; Cleveland, Don W; Grishchuk, Ekaterina L

    2014-08-01

    Centromere protein E (CENP-E) is a highly elongated kinesin that transports pole-proximal chromosomes during congression in prometaphase. During metaphase, it facilitates kinetochore-microtubule end-on attachment required to achieve and maintain chromosome alignment. In vitro CENP-E can walk processively along microtubule tracks and follow both growing and shrinking microtubule plus ends. Neither the CENP-E-dependent transport along microtubules nor its tip-tracking activity requires the unusually long coiled-coil stalk of CENP-E. The biological role for the CENP-E stalk has now been identified through creation of "Bonsai" CENP-E with significantly shortened stalk but wild-type motor and tail domains. We demonstrate that Bonsai CENP-E fails to bind microtubules in vitro unless a cargo is contemporaneously bound via its C-terminal tail. In contrast, both full-length and truncated CENP-E that has no stalk and tail exhibit robust motility with and without cargo binding, highlighting the importance of CENP-E stalk for its activity. Correspondingly, kinetochore attachment to microtubule ends is shown to be disrupted in cells whose CENP-E has a shortened stalk, thereby producing chromosome misalignment in metaphase and lagging chromosomes during anaphase. Together these findings establish an unexpected role of CENP-E elongated stalk in ensuring stability of kinetochore-microtubule attachments during chromosome congression and segregation. © 2014 Vitre, Gudimchuk, et al. This article is distributed by The American Society for Cell Biology under license from the author(s). Two months after publication it is available to the public under an Attribution–Noncommercial–Share Alike 3.0 Unported Creative Commons License (http://creativecommons.org/licenses/by-nc-sa/3.0).

  8. The ectomycorrhizal fungus Paxillus involutus converts organic matter in plant litter using a trimmed brown-rot mechanism involving Fenton chemistry

    DEFF Research Database (Denmark)

    Rineau, Francois; Roth, Doris; Shah, Firoz

    2012-01-01

    chemistry similar to that of brown-rot fungi. The set of enzymes expressed by Pa. involutus during the degradation of the organic matter was similar to the set of enzymes involved in the oxidative degradation of wood by brown-rot fungi. However, Pa. involutus lacked transcripts encoding extracellular...... the mycorrhizal fungi. To capture the nitrogen, the fungi must at least partly disrupt the recalcitrant organic matterprotein complexes within which the nitrogen is embedded. This disruption process is poorly characterized. We used spectroscopic analyses and transcriptome profiling to examine the mechanism...... by which the ectomycorrhizal fungus Paxillus involutus degrades organic matter when acquiring nitrogen from plant litter. The fungus partially degraded polysaccharides and modified the structure of polyphenols. The observed chemical changes were consistent with a hydroxyl radical attack, involving Fenton...

  9. Role of Rot in bacterial autolysis regulation of Staphylococcus aureus NCTC8325.

    Science.gov (United States)

    Chu, Xinmin; Xia, Rui; He, Nianan; Fang, Yuting

    2013-09-01

    Autolysis is an important process in cell wall turnover in Staphylococcus aureus, performed by several peptidoglycan hydrolases or so-called autolysins and controlled by many regulators. Rot is a global regulator that regulates numerous virulence genes, including genes encoding lipase, hemolysins, proteases and genes related to cell surface adhesion. The aim of our study was to determine whether Rot has the ability to regulate autolysis. We compared Triton-X-100-induced autolysis of S. aureus NCTC8325 and its rot knock-out mutant. We found that the rot mutant showed increased autolysis rates. By examining the transcript level of several autolysins and some known regulators responsible for regulating autolysis using real-time RT-PCR assays, we found that transcription of two autolysins (lytM, lytN) and one regulatory operon (lrgAB) was changed in the rot mutant. An in vitro approach was undertaken to determine which of these genes are directly controlled by Rot. Rot proteins were overproduced in Escherichia coli and purified. Gel mobility shift DNA binding assays were used and showed that in-vitro-purified Rot can directly bind to the promoter region of lytM, lytN, lrgA and lytS. We also tested biofilm formation of the rot mutant, and it showed enhancement in biofilm formation. Taken together, our results reveal that Rot affects autolysis by directly regulating autolysins LytM and LytN, and, via a regulatory system, LrgAB. Copyright © 2013 Institut Pasteur. Published by Elsevier Masson SAS. All rights reserved.

  10. Conjunctively screening of biocontrol agents (BCAs) against fusarium root rot and fusarium head blight caused by Fusarium graminearum.

    Science.gov (United States)

    Wang, Lu-Yao; Xie, Yue-Shen; Cui, Yuan-Yu; Xu, Jianjun; He, Wei; Chen, Huai-Gu; Guo, Jian-Hua

    2015-08-01

    Fusarium root-rot and fusarium head blight are plant diseases caused by Fusarium sp. in different growth periods of wheat, bring heavy losses to crop production in China. This research is aiming to screen biocontrol agents conjunctively for controlling these two diseases at the same time, as well as evaluate our previous BCAs (Biological Control Agents) screening strategies in more complex situation, considering biocontrol is well concerned as an environmental-friendly plant disease controlling method. Totally 966 bacterial isolates were screened from different parts of wheat tissues, of which potential biocontrol values were detected according to their abilities in antagonism inhibition and secreting extracellular hydrolytic enzyme. Biocontrol tests against fusarium root rot and fusarium head blight were carried out on 37 bacterial isolates with potential biocontrol capacity after pre-selection through ARDRA- and BOX-PCR analysis on strains with high assessment points. We acquired 10 BCAs with obvious biocontrol efficacy (more than 40%) in greenhouse and field tests. Pseudomonas fluorescens LY1-8 performed well in both two tests (biocontrol efficacy: 44.62% and 58.31%), respectively. Overall, correlation coefficient is 0.720 between assessment values of 37 tested BCA strains and their biocontrol efficacy in trails against fusarium root rot; correlation coefficient is 0.806 between their assessment values and biocontrol efficacy in trails against fusarium head blight. We acquired 10 well-performed potential BCAs, especially P. fluorescens LY1-8 displayed good biocontrol capacity against two different diseases on wheat. Biocontrol efficacies results in both greenhouse and field tests showed high positive correlation with assessment values (0.720 and 0.806), suggesting that the BCAs screening and assessing strategy previously developed in our lab is also adaptable for conjunctively screening BCAs for controlling both root and shoot diseases on wheat caused by same

  11. Efficient xylose fermentation by the brown rot fungus Neolentinus lepideus.

    Science.gov (United States)

    Okamoto, Kenji; Kanawaku, Ryuichi; Masumoto, Masaru; Yanase, Hideshi

    2012-02-10

    The efficient production of bioethanol on an industrial scale requires the use of renewable lignocellulosic biomass as a starting material. A limiting factor in developing efficient processes is identifying microorganisms that are able to effectively ferment xylose, the major pentose sugar found in hemicellulose, and break down carbohydrate polymers without pre-treatment steps. Here, a basidiomycete brown rot fungus was isolated as a new biocatalyst with unprecedented fermentability, as it was capable of converting not only the 6-carbon sugars constituting cellulose, but also the major 5-carbon sugar xylose in hemicelluloses, to ethanol. The fungus was identified as Neolentinus lepideus and was capable of assimilating and fermenting xylose to ethanol in yields of 0.30, 0.33, and 0.34 g of ethanol per g of xylose consumed under aerobic, oxygen-limited, and anaerobic conditions, respectively. A small amount of xylitol was detected as the major by-product of xylose metabolism. N. lepideus produced ethanol from glucose, mannose, galactose, cellobiose, maltose, and lactose with yields ranging from 0.34 to 0.38 g ethanol per g sugar consumed, and also exhibited relatively favorable conversion of non-pretreated starch, xylan, and wheat bran. These results suggest that N. lepideus is a promising candidate for cost-effective and environmentally friendly ethanol production from lignocellulosic biomass. To our knowledge, this is the first report on efficient ethanol fermentation from various carbohydrates, including xylose, by a naturally occurring brown rot fungus. Copyright © 2011 Elsevier Inc. All rights reserved.

  12. Sclerotinia Rot on Basil Caused by Sclerotinia sclerotiorum in Korea

    Directory of Open Access Journals (Sweden)

    Soo Sang Hahm

    2017-03-01

    Full Text Available During growing season of 2011 to 2013, Sclerotinia rot symptoms consistently have been observed on basil in Yesan-gun, Chungcheongnam-do in Korea. The typical symptom formed initially brownish spot on leaf and stem, and then advancing margins, wilting the whole plant and blighting, eventually died. On the surface of diseased lesions was observed cottony, white, dense mat of mycelial growth, and sclerotia (30–100 µm diameter formed on stem and leaf. Morphological and cultural characteristic on potato dextrose agar, color of colony was white and colorless chocolate, sclerotium of irregular shape of the oval was black and 5–50 µm diameter in size. In pathogenicity test, necrosis and wilt of the inoculated stem were observed in all plants and the pathogen was reisolated from stems. On the basis of mycological characteristics, pathogenicity, and internal transcribed spacer rDNA sequence analysis, this fungus was identified as Sclerotinia sclerotiorum. This is the first report of Sclerotinia rot on basil caused by S. sclerotiorum in Korea.

  13. Ribosomal Stalk Protein Silencing Partially Corrects the ΔF508-CFTR Functional Expression Defect.

    Directory of Open Access Journals (Sweden)

    Guido Veit

    2016-05-01

    Full Text Available The most common cystic fibrosis (CF causing mutation, deletion of phenylalanine 508 (ΔF508 or Phe508del, results in functional expression defect of the CF transmembrane conductance regulator (CFTR at the apical plasma membrane (PM of secretory epithelia, which is attributed to the degradation of the misfolded channel at the endoplasmic reticulum (ER. Deletion of phenylalanine 670 (ΔF670 in the yeast oligomycin resistance 1 gene (YOR1, an ABC transporter of Saccharomyces cerevisiae phenocopies the ΔF508-CFTR folding and trafficking defects. Genome-wide phenotypic (phenomic analysis of the Yor1-ΔF670 biogenesis identified several modifier genes of mRNA processing and translation, which conferred oligomycin resistance to yeast. Silencing of orthologues of these candidate genes enhanced the ΔF508-CFTR functional expression at the apical PM in human CF bronchial epithelia. Although knockdown of RPL12, a component of the ribosomal stalk, attenuated the translational elongation rate, it increased the folding efficiency as well as the conformational stability of the ΔF508-CFTR, manifesting in 3-fold augmented PM density and function of the mutant. Combination of RPL12 knockdown with the corrector drug, VX-809 (lumacaftor restored the mutant function to ~50% of the wild-type channel in primary CFTRΔF508/ΔF508 human bronchial epithelia. These results and the observation that silencing of other ribosomal stalk proteins partially rescue the loss-of-function phenotype of ΔF508-CFTR suggest that the ribosomal stalk modulates the folding efficiency of the mutant and is a potential therapeutic target for correction of the ΔF508-CFTR folding defect.

  14. Pituitary stalk interruption syndrome in Chinese people: clinical characteristic analysis of 55 cases.

    Directory of Open Access Journals (Sweden)

    Qinghua Guo

    Full Text Available OBJECTIVE: Pituitary stalk interruption syndrome (PSIS is characterized by the absence of pituitary stalk, pituitary hypoplasia, and ectopic posterior pituitary. Due to the rarity of PSIS, clinical data are limited, especially in Chinese people. Herein, we analyzed the clinical characteristics of patients diagnosed with PSIS from our center over 10 years. PATIENTS AND METHODS: We retrospectively analyzed the clinical manifestations and laboratory and MRI findings in 55 patients with PSIS. RESULTS: Of the 55 patients with PSIS, 48 (87.3% were male. The average age was 19.7±6.7 years and there was no familial case. A history of breech delivery was documented in 40 of 45 patients (88.9% and 19 of 55 patients (34.5% had a history of dystocia. Short stature was found in 47 of 55 patients (85.5% and bone age delayed 7.26±5.37 years. Secondary sex characteristics were poor or undeveloped in most patients. The prevalence of deficiencies in growth hormone, gonadotropins, corticotropin, and thyrotropin were 100%, 95.8%, 81.8%, 76.3%, respectively. Hyperprolactinemia was found in 36.4% of patients. Three or more pituitary hormone deficiencies were found in 92.7% of the patients. All patients had normal posterior pituitary function and absent pituitary stalk on imaging. The average height of anterior pituitary was 28 mm, documented anterior pituitary hypoplasia. Midline abnormalities were presented in 9.1% of patients. CONCLUSIONS: The clinical features of our Chinese PSIS patients seem to be different from other reported patients in regarding to the higher degree of hypopituitarism and lower prevalence of midline defects. In addition, our patients were older at the time of case detection and the bone age was markedly delayed. We also had no cases of familial PSIS.

  15. Effect of chromium speciation on its sorption mechanism onto grape stalks entrapped into alginate beads

    OpenAIRE

    Escudero, Carlos; Fiol, Núria; Villaescusa, Isabel; Bollinger, Jean-Claude

    2013-01-01

    Sorption of Cr(III) and Cr(VI) ions onto 2% grape stalk (GS) powder entrapped in a biopolymeric gel matrix of calcium alginate (CA) has been investigated and a mechanism for the retention of both, Cr(VI) and Cr(III) is proposed. Protons were found to be consumed in Cr(VI) sorption/reduction and to compete with Cr(III) for the sorbent active sites. Isotherm equilibrium was modelled according to Langmuir equation: maximum capacity was found to be 6.4 and 3.6 mg g−1 for Cr(III) and Cr(VI), respe...

  16. Female same gender stalking: a brief review of the literature and case report.

    Science.gov (United States)

    Carabellese, Felice; Candelli, Chiara; La Tegola, Donatella; Alfarano, Egle; Catanesi, Roberto

    2013-05-10

    The authors analyze a rare case of female same gender stalking that came to their observation as forensic psychiatry experts. Despite previously only heterosexual experiences, the woman, who was 30 in 2002, had three intimate same gender relationships in succession from 2002 to 2009: she broke off with each woman in order to take up with another. When she separated from the third woman she began violent persecutory behavior against her, in the form of harassment coming under the heading of stalking, and was reported to the authorities. In treatment with SSRI since 2003 for an anxiety disorder with panic episodes, she had been taking the drugs irregularly during the stalking period. At the end of the third relationship, after she had violently attacked her girlfriend she was advised by her family to present to a Hospital center in Northern Italy. There, she was diagnosed with a "Narcissistic Paranoid Personality Disorder", and it was hypothesized that the SSRI she was taking could have induced hypo/manic episodes and disinhibition in the woman, who had previously been heterosexual. At this hospital, mood stabilizers were prescribed. The defending lawyer therefore applied for a forensic psychiatry assessment, claiming that the persecutory behavior against the third girlfriend was induced by taking SSRI. In Italy the penal code specifies the recognition of abolished or diminished liability for crimes if a correlation between the mental disease and the crime can be demonstrated, if the disease was in course at the time of the crime, and if the motives behind the crime and the disease can be shown to be linked. In short, if the crime can be shown to be a symptom of the disease. But the forensic psychiatry assessment demonstrated that despite the presence of some factors of a psychopathological nature, the motives underlying the harassment were attributable to the woman's existential history and personality structure rather than to psychopathological causes. She was

  17. Effect of Environment and Sugar Beet Genotype on Root Rot Development and Pathogen Profile During Storage.

    Science.gov (United States)

    Liebe, Sebastian; Varrelmann, Mark

    2016-01-01

    Storage rots represent an economically important factor impairing the storability of sugar beet by increasing sucrose losses and invert sugar content. Understanding the development of disease management strategies, knowledge about major storage pathogens, and factors influencing their occurrence is crucial. In comprehensive storage trials conducted under controlled conditions, the effects of environment and genotype on rot development and associated quality changes were investigated. Prevalent species involved in rot development were identified by a newly developed microarray. The strongest effect on rot development was assigned to environment factors followed by genotypic effects. Despite large variation in rot severity (sample range 0 to 84%), the spectrum of microorganisms colonizing sugar beet remained fairly constant across all treatments with dominant species belonging to the fungal genera Botrytis, Fusarium, and Penicillium. The intensity of microbial tissue necrotization was strongly correlated with sucrose losses (R² = 0.79 to 0.91) and invert sugar accumulation (R² = 0.91 to 0.95). A storage rot resistance bioassay was developed that could successfully reproduce the genotype ranking observed in storage trials. Quantification of fungal biomass indicates that genetic resistance is based on a quantitative mechanism. Further work is required to understand the large environmental influence on rot development in sugar beet.

  18. Simultaneous Detection of Brown Rot- and Soft Rot-Causing Bacterial Pathogens from Potato Tubers Through Multiplex PCR.

    Science.gov (United States)

    Ranjan, R K; Singh, Dinesh; Baranwal, V K

    2016-11-01

    Ralstonia solanacearum (Smith) Yabuuchi et al. and Erwinia carotovora subsp. carotovora (Jones) Bergey et al. (Pectobacterium carotovorum subsp. carotovorum) are the two major bacterial pathogens of potato causing brown rot (wilt) and soft rot diseases, respectively, in the field and during storage. Reliable and early detection of these pathogens are keys to avoid occurrence of these diseases in potato crops and reduce yield loss. In the present study, multiplex polymerase chain reaction (PCR) protocol was developed for simultaneous detection of R. solanacearum and E. carotovora subsp. carotovora from potato tubers. A set of oligos targeting the pectatelyase (pel) gene of E. carotovora subsp. carotovora and the universal primers based on 16S r RNA gene of R. solanacearum were used. The standardized multiplex PCR protocol could detect R. solanacearum and E. carotovora subsp. carotovora up to 0.01 and 1.0 ng of genomic DNA, respectively. The protocol was further validated on 96 stored potato tuber samples, collected from different potato-growing states of India, viz. Uttarakhand, Odisha, Meghalaya and Delhi. 53.1 % tuber samples were positive for R. solanacearum, and 15.1 % of samples were positive for E. carotovora subsp. carotovora, and both the pathogens were positive in 26.0 % samples when BIO-PCR was used. This method offers sensitive, specific, reliable and fast detection of two major bacterial pathogens from potato tubers simultaneously, particularly pathogen-free seed certification in large scale.

  19. Fracture line index of fibular stalk and the ankle joint bone in the classification of the ankle joint trauma

    International Nuclear Information System (INIS)

    Wu Jun; Zhang Qiang

    2003-01-01

    Objective: To evaluate the fracture line index of fibular stalk and the ankle joint bone in the classification of the ankle joint trauma. Methods: Measure fracture line index of fibular stalk and the ankle joint in 217 adult cases of fracture and dislocation of ankle joint. And the cases were classified by the results of the measurement. Results: Measurement was unavailable in 9 cases of tearing fracture. In 31 cases, the lesions could not be particularly classified. And in the rest 176 cases the trauma were precisely classified. The over all successful rate was 81.6%. Conclusion: Fracture line index of fibular stalk and the ankle joint bone are valuable in classification of the trauma of the angle joint. While the specificity of this method is low in differentiating the adducting and abducting fracture of the medial angle, in which a combined investigation is recommended

  20. Evidence of the most stretchable egg sac silk stalk, of the European spider of the year Meta menardi.

    Directory of Open Access Journals (Sweden)

    Emiliano Lepore

    Full Text Available Spider silks display generally strong mechanical properties, even if differences between species and within the same species can be observed. While many different types of silks have been tested, the mechanical properties of stalks of silk taken from the egg sac of the cave spider Meta menardi have not yet been analyzed. Meta menardi has recently been chosen as the "European spider of the year 2012", from the European Society of Arachnology. Here we report a study where silk stalks were collected directly from several caves in the north-west of Italy. Field emission scanning electron microscope (FESEM images showed that stalks are made up of a large number of threads, each of them with diameter of 6.03 ± 0.58 µm. The stalks were strained at the constant rate of 2 mm/min, using a tensile testing machine. The observed maximum stress, strain and toughness modulus, defined as the area under the stress-strain curve, are 0.64 GPa, 751% and 130.7 MJ/m(3, respectively. To the best of our knowledge, such an observed huge elongation has never been reported for egg sac silk stalks and suggests a huge unrolling microscopic mechanism of the macroscopic stalk that, as a continuation of the protective egg sac, is expected to be composed by fibres very densely and randomly packed. The Weibull statistics was used to analyze the results from mechanical testing, and an average value of Weibull modulus (m is deduced to be in the range of 1.5-1.8 with a Weibull scale parameter (σ(0 in the range of 0.33-0.41 GPa, showing a high coefficient of correlation (R(2 = 0.97.

  1. Phloem transcriptome signatures underpin the physiological differentiation of the pedicel, stalk and fruit of cucumber (Cucumis sativus L.).

    Science.gov (United States)

    Zhao, Jianyu; Li, Yanqiang; Ding, Lian; Yan, Shuangshuang; Liu, Meiling; Jiang, Li; Zhao, Wensheng; Wang, Qian; Yan, Liying; Liu, Renyi; Zhang, Xiaolan

    2016-01-01

    Cucumber is one of the most important vegetables grown worldwide due to its important economic and nutritional value. The cucumber fruit consists morphologically of the undesirable stalk and the tasty fruit; however, physiological differentiation of these two parts and the underlying molecular basis remain largely unknown. Here we characterized the physiological differences among the pedicel, stalk and fruit, and compared the respective phloem transcriptomes using laser capture microdissection coupled with RNA sequencing (RNA-Seq). We found that the pedicel was characterized by minor cell expansion and a high concentration of stachyose, the stalk showed rapid cell expansion and high raffinose accumulation, and the fruit featured transition from cell division to cell expansion and high levels of monosaccharides. Analyses of transcriptome data indicated that cell wall- and calcium ion binding-related genes contributed to the cell expansion in the pedicel and stalk, whereas genes implicated in cell cycle and hormone actions regulated the transition from cell division to cell expansion in the fruit. Differential sugar distribution in these three phloem-connected tissues resulted from tissue-specific sugar metabolism and transport. Enrichment of transcription factors in the stalk and fruit may facilitate nutrient accumulation in these sink organs. As such, phloem-located gene expression partially orchestrated physiological differentiation of the pedicel, stalk and fruit in cucumber. In addition, we identified 432 cucumber-unique genes and five phloem markers guiding future functional studies. © The Author 2015. Published by Oxford University Press on behalf of Japanese Society of Plant Physiologists. All rights reserved. For permissions, please email: journals.permissions@oup.com.

  2. Distribution and prevalence of crown rot pathogens affecting wheat crops in southern Chile

    OpenAIRE

    Ernesto Moya-Elizondo; Nolberto Arismendi; María Paz Castro; Herman Doussoulin

    2015-01-01

    Crown rot pathogens are associated with higher losses for wheat crop farmers, but information about the distribution and prevalence of these pathogens in Chile is inadequate. Distribution and prevalence of wheat (Triticum aestivum L.) crown rot pathogens were examined in a survey of 48 commercial fields from December 2011 to February 2012 in southern Chile. These fields were located between Collipulli (37°56'00" S; 72°26'39" W) and Purranque (40°50'30" S; 73°22'03" W). Severity of crown rot d...

  3. Armillaria root rot -- rev. revised edition. Information leaflet No. LFC 14E

    Energy Technology Data Exchange (ETDEWEB)

    Lachance, D.

    1996-11-01

    Armillaria root rot is a disease of the roots of plants and is caused by a fungus belonging to the genus `Armillaria spp.`. Most tree species in both the temperate and tropical zones can be affected by this disease; however, the damage is most notable and probably greatest in plantations. Armillaria root rot can be controlled, albeit with difficulty. This document looks at armillaria root rot and looks at the following points: Hosts and extent of the disease; the pathogens; symptoms and signs; infection and development; control; prevention; compromise solution; and, bibliography.

  4. Neofusicoccum luteum associated with leaf necrosis and fruit rot of olives in New South Wales, Australia

    Directory of Open Access Journals (Sweden)

    V. Sergeeva

    2009-09-01

    Full Text Available Neofusicoccum luteum is reported for the first time from olives (Olea europaea, causing fruit rot and leaf necrosis. Affected fruits initially became brown with pycnidia developing on the surface, later drying out and becoming mummified. The fungus was shown to be pathogenic on both fruits and leaves. The association of Botryosphaeriaceae with rotting olive fruits in Mediterranean regions and in New South Wales, Australia indicates that these fungi play a significant role in fruit rots of olives and deserve greater attention.

  5. Control of Ralstonia Solanacearum The Causal Agent of Brown Rot in Potato Using Essential Oils

    International Nuclear Information System (INIS)

    Salem, E.A.

    2011-01-01

    Five essential oils, namely peppermint (Mentha piperita L.), caraway (Carium carvum L.), fennel (Foeniculum vulgare Mill.), lemongrass (Cymbopogon citratus Staph.) and thyme (Thymus vulgaris), were used separately against Ralstonia solanacearum; the causal agent of brown rot in potato. The most two effective oils (peppermint and thyme) were used in vitro and in vivo after testing their effects on potato tubers buds germination. Peppermint inhibited buds germination but thyme have no effects on buds germination. In vivo, the control of brown rot using thyme oil in glass house experiment reduced the percentage of brown rot infection to 30.6% and reduced the severity of disease from 5 to 3.

  6. High-resolution heavily T2-weighted magnetic resonance imaging for evaluation of the pituitary stalk in children with ectopic neurohypophysis

    Energy Technology Data Exchange (ETDEWEB)

    Sanharawi, Imane El; Tzarouchi, Loukia [Hopital Robert Debre, APHP, Service de Radiologie Pediatrique, Paris (France); Cardoen, Liesbeth [Hopital Robert Debre, APHP, Service de Radiologie Pediatrique, Paris (France); Universite Paris Diderot, Paris (France); Martinerie, Laetitia; Leger, Juliane; Carel, Jean-Claude [Universite Paris Diderot, Paris (France); Inserm U1141, DHU PROTECT, Paris (France); Hopital Robert Debre, APHP, Service d' Endocrinologie Pediatrique, Paris (France); Elmaleh-Berges, Monique [Hopital Robert Debre, APHP, Service de Radiologie Pediatrique, Paris (France); Inserm U1141, DHU PROTECT, Paris (France); Alison, Marianne [Hopital Robert Debre, APHP, Service de Radiologie Pediatrique, Paris (France); Universite Paris Diderot, Paris (France); Inserm U1141, DHU PROTECT, Paris (France)

    2017-05-15

    In anterior pituitary deficiency, patients with non visible pituitary stalk have more often multiple deficiencies and persistent deficiency than patients with visible pituitary stalk. To compare the diagnostic value of a high-resolution heavily T2-weighted sequence to 1.5-mm-thick unenhanced and contrast-enhanced sagittal T1-weighted sequences to assess the presence of the pituitary stalk in children with ectopic posterior pituitary gland. We retrospectively evaluated the MRI data of 14 children diagnosed with ectopic posterior pituitary gland between 2010 and 2014. We evaluated the presence of a pituitary stalk using a sagittal high-resolution heavily T2-weighted sequence and a 1.5-mm sagittal T1-weighted turbo spin-echo sequence before and after contrast medium administration. A pituitary stalk was present on at least one of the sequences in 10 of the 14 children (71%). T2-weighted sequence depicted the pituitary stalk in all 10 children, whereas the 1.5-mm-thick T1-weighted sequence depicted 2/10 (20%) before contrast injection and 8/10 (80%) after contrast injection (P=0.007). Compared with 1.5-mm-thick contrast-enhanced T1-weighted sequences, high-resolution heavily T2-weighted sequence demonstrates better sensitivity in detecting the pituitary stalk in children with ectopic posterior pituitary gland, suggesting that contrast injection is unnecessary to assess the presence of a pituitary stalk in this setting. (orig.)

  7. Construction of 2 intraspecific linkage maps and identification of resistance QTLs for Phytophthora capsici root-rot and foliar-blight diseases of pepper (Capsicum annuum L.).

    Science.gov (United States)

    Ogundiwin, Ebenezer A; Berke, Terry F; Massoudi, Mark; Black, Lowell L; Huestis, Gordon; Choi, Doil; Lee, Sanghyeob; Prince, James P

    2005-08-01

    Two linkage maps of pepper were constructed and used to identify quantitative trait loci (QTLs) conferring resistance to Phytophthora capsici. Inoculations were done with 7 isolates: 3 from Taiwan, 3 from California, and 1 from New Mexico. The first map was constructed from a set of recombinant inbred lines (RILs) of the PSP-11 (susceptible) x PI201234 (resistant) cross; and the second map was from a set of F(2) lines of the Joe E. Parker' (susceptible) x 'Criollo de Morelos 334' (resistant) cross. The RIL map covered 1466.1 cM of the pepper genome, and it consisted of 144 markers -- 91 amplified fragment length polymorphisms (AFLPs), 34 random amplified polymorphic DNA (RAPDs), 15 simple sequence repeats (SSRs), 1 sequence characterized amplified region (SCAR), and 3 morphological markers -- distributed over 17 linkage groups. The morphological markers mapped on this population were erect fruit habit (up), elongated fruit shape (fs(e)), and fasciculate fruit clusters (fa). The F(2) map consisted of 113 markers (51 AFLPs, 45 RAPDs, 14 SSRs, and 3 SCARs) distributed in 16 linkage groups, covering a total of 1089.2 cM of the pepper genome. Resistance to both root rot and foliar blight were evaluated in the RIL population using the 3 Taiwan isolates; the remaining isolates were used for the root-rot test only. Sixteen chromosomal regions of the RIL map contained single QTLs or clusters of resistance QTLs that had an effect on root rot and (or) foliar blight, revealing a complex set of genetics involved in resistance to P. capsici. Five QTLs were detected in the F(2) map that had an effect on resistance to root rot.

  8. The subcellular distribution of the human ribosomal "stalk" components: P1, P2 and P0 proteins

    DEFF Research Database (Denmark)

    Tchórzewski, Marek; Krokowski, Dawid; Rzeski, Wojciech

    2003-01-01

    The ribosomal "stalk" structure is a distinct lateral protuberance located on the large ribosomal subunit in prokaryotic, as well as in eukaryotic cells. In eukaryotes, this ribosomal structure is composed of the acidic ribosomal P proteins, forming two hetero-dimers (P1/P2) attached......-proteins that are not actively transported into the nucleus; moreover, this might imply that the "stalk" constituents are assembled onto the ribosomal particle at the very last step of ribosomal maturation, which takes part in the cell cytoplasm....

  9. Modification of Sorghum Starch-Cellulose Bioplastic with Sorghum Stalks Filler

    Directory of Open Access Journals (Sweden)

    Yuli Darni

    2017-05-01

    Full Text Available This study evaluated the feasibility of bioplastics production by various ratio of sorghum starch and cellulose from red seaweed Eucheuma spinossum, and the use of glycerol as plasticizer and sorghum stalks as filler. Solid-liquid matrix transition should be far over the operating temperature of gelatinization and extracted at 95oC in order to avoid the loss of conductivity. The analyzed variables were starch and cellulose seaweed Eucheuma spinossum and the addition of variation of filler. Sorghum stalk could be expected to affect the mechanical and physical properties of bioplastics. A thin sheet of plastic (plastic film was obtained as a result that have been tested mechanically to obtain the best condition for the formulation of starch-cellulose 8.5:1.5 (g/g. From the result of morphological studies, the fillers in the mixture composites were more randomly in each product and the addition of filler can increase mechanical properties of bioplastics. Chemical modification had a major effect on the mechanical properties. The phenomena of degradation and thermoplasticization were visible at chemical changes that can be observed in FTIR spectrum test results.

  10. Structural characterization of polysaccharides isolated from grape stalks of Vitis vinifera L.

    Science.gov (United States)

    Prozil, Sónia O; Costa, Elisabete V; Evtuguin, Dmitry V; Lopes, Luísa P Cruz; Domingues, M Rosário M

    2012-07-15

    The main structural polysaccharides of grape stalks are cellulose, heteroxylan, and glucan. Cellulose contributes 30.3% of grape stalk matter and has an unusually high degree of the crystallinity (75.4%). Among hemicelluloses, xylan was the most abundant one, contributing ∼12% to the weight. The heteroxylan was isolated from the corresponding peracetic holocellulose by DMSO extraction followed by precipitation in ethanol. The M(w) of heteroxylan (19.0 kDa) was assessed by size exclusion chromatography (SEC) and the structure was inferred by methanolysis and methylation linkage analysis, as well as 1D and 2D nuclear magnetic resonance (NMR) spectroscopy. The heteroxylan is a partially acetylated (DS=0.49) glucuronoxylan possessing the main backbone composed by β-(1→4)-linked D-xylopyranosyl units ramified with α-(1→2)-linked 4-O-methyl-α-D-glucuronosyl residues (MeGlcpA) at a molar ratio 25:1. The isolated heteroxylan contained concomitant β-glucan (ca. 15%), whose structure was elucidated by methylation linkage analysis and by NMR spectroscopy. The results obtained revealed mixed β-(1→3; 1→4)-D-glucan with a molar ratio of β-(1→3)- to β-(1→4)-linked glucopyranosyl units of 1:2. Copyright © 2012 Elsevier Ltd. All rights reserved.

  11. Effect of thermal and high pressure processing on stability of betalain extracted from red beet stalks.

    Science.gov (United States)

    Dos Santos, Cláudia Destro; Ismail, Marliya; Cassini, Aline Schilling; Marczak, Ligia Damasceno Ferreira; Tessaro, Isabel Cristina; Farid, Mohammed

    2018-02-01

    Red beet stalks are a potential source of betalain, but their pigments are not widely used because of their instability. In the present work, the applicability of high pressure processing (HPP) and high temperature short time (HTST) thermal treatment was investigated to improve betalain stability in extracts with low and high concentrations. The HPP was applied at 6000 bar for 10, 20 and 30 min and HTST treatment was applied at 75.7 °C for 80 s, 81.1 °C for 100 s and 85.7 °C for 120 s, HPP treatment did not show any improvement in the betalain stability. In turn, the degradation rate of the control and the HTST thermal treatment at 85.7 °C for 120 s of the sample with high initial betalain concentration were 1.2 and 0.4 mg of betanin/100 ml of extract per day respectively. Among the treatments studied, HTST was considered the most suitable to maintain betalain stability from red beet stalks.

  12. Experimental Study of Reciprocating Friction between Rape Stalk and Bionic Nonsmooth Surface Units

    Directory of Open Access Journals (Sweden)

    Zheng Ma

    2015-01-01

    Full Text Available Background. China is the largest producer of rape oilseed in the world; however, the mechanization level of rape harvest is relatively low, because rape materials easily adhere to the cleaning screens of combine harvesters, resulting in significant cleaning losses. Previous studies have shown that bionic nonsmooth surface cleaning screens restrain the adhesion of rape materials, but the underlying mechanisms remain unclear. Objective. The reciprocating friction between rape stalk and bionic nonsmooth metal surface was examined. Methods. The short-time Fourier transform method was used to discriminate the stable phase of friction signals and the stick-lag distance was defined to analyze the stable reciprocating friction in a phase diagram. Results. The reciprocating friction between rape stalk and metal surface is a typical stick-slip friction, and the bionic nonsmooth metal surfaces with concave or convex units reduced friction force with increasing reciprocating frequency. The results also showed that the stick-lag distance of convex surface increased with reciprocating frequency, which indicated that convex surface reduces friction force more efficiently. Conclusions. We suggest that bionic nonsmooth surface cleaning screens, especially with convex units, restrain the adhesion of rape materials more efficiently compared to the smooth surface cleaning screens.

  13. Evolution of genital asymmetry, exaggerated eye stalks, and extreme palpal elongation in Panjange spiders (Araneae: Pholcidae

    Directory of Open Access Journals (Sweden)

    Bernhard Huber

    2015-12-01

    Full Text Available We describe several new species of the previously monotypic Panjange lanthana species group from the Philippines and document their extraordinary morphology. Some species show strong male genital asymmetry, a phenomenon that seems to be exceedingly rare in spiders. Males of most species have eye stalks, and in two species these eye stalks are among the longest ever recorded in spiders. Some species show a tendency for male genital (pedipalp elongation, and one species has the longest and thinnest palps ever recorded in Pholcidae. A cladistic analysis is performed including all described and several undescribed species of Panjange (except for one “problem species”, supporting the lanthana group and its close relationship with members of the possibly paraphyletic cavicola group. The following eight new species are described: Panjange malagos Huber sp. nov.; Pa. casaroro Huber sp. nov.; Pa. camiguin Huber sp. nov.; Pa. hamiguitan Huber sp. nov.; Pa. isarog Huber sp. nov.; Pa. dinagat Huber sp. nov.; Pa. marilog Huber sp. nov.; Pa. bukidnon Huber sp. nov.

  14. Xylooligosaccharide Production from Tobacco Stalk Xylan using Xylanase Streptomyces sp. BO 3.2

    Directory of Open Access Journals (Sweden)

    Muhammad Nur Kholis

    2015-06-01

    Full Text Available Tobacco stalk (TS, which is one type of lignocellulosic material, has a xylan content of up to 21.9%. Lignocellulose can be used to produce xylooligosaccharides (XOs. XOs are dietary fibers that have prebiotic activity. This study aimed to produce XOs from tobacco stalk xylan using xylanase from Streptomyces sp. BO 3.2. After the TS was delignified, the xylan was extracted using the alkali method. The delignification process, which used 1% natrium hypoclorite (NaOCl, decreased the lignins from 32.93% to 18.15%. Xylan extraction was conducted using 10% natrium hydoroxide (NaOH; this extraction produced xylan of 15.53% (w/w. The xylanase produced by Streptomyces sp. BO 3.2 on a 0.5% TS medium had 5.92 U/mL of activity, with the optimum condition occurring at pH 5.5 and a temperature of 60 °C. The xylanase was stable, at temperature 4 °C and 30 °C for 120 hours. The xylanase Streptomyces sp. BO 3.2 was capable of hydrolyzing 2% TS xylan and 2% beechwood xylan during the first, third, sixth, and twelfth hours of incubation time; it also produced XOs with degrees of polymerization (DP of 2.18 and 2.15, respectively. A Thin layer chomatography (TLC analysis indicated that the hydrolysis products were XOs with the absence of xylose, glucose, and arabinose.

  15. Saccharification of sunflower stalks using lignocellulases from a fungal consortium comprising Pholiota adiposa and Armillaria gemina.

    Science.gov (United States)

    Ramachandran, Priyadharshini; Kim, Tae-Su; Dhiman, Saurabh Sudha; Li, Jinglin; Park, Ji-Hyun; Choi, Joon-Ho; Kim, Jae Young; Kim, Dongwook; Lee, Jung-Kul

    2015-09-01

    Lignocellulases from Armillaria gemina and Pholiota adiposa are efficient in hydrolyzing aspen and poplar biomass, respectively. In the present study, lignocellulosic enzymes obtained from a fungal consortium comprising P. adiposa and A. gemina were used for the saccharification of sunflower stalks. Sunflower stalks were thermochemically pretreated using 2 % NaOH at 50 °C for 24 h. The saccharification process parameters including substrate concentration, enzyme loading, pH, and temperature were optimized using response surface methodology to improve the saccharification yield. The highest enzymatic hydrolysis (84.3 %) was obtained using the following conditions: enzyme loading 10 FPU/g-substrate, substrate 5.5 %, temperature 50 °C, and pH 4.5. The hydrolysis yield obtained using the enzymes from the fungal consortium was equivalent to that obtained using a mixture of commercial enzymes Celluclast and Novozyme β-glucosidase. Addition of up to 500 ppm of heavy metal ions (As, Cu, Fe, Mn, Ni, Pb, and Zn) during saccharification did not significantly affect the saccharification yield. Thus, the biomass grown for phytoremediation of heavy metals can be used for the production of reducing sugars followed by ethanol fermentation.

  16. Stalk and sucrose yield in response to nitrogen fertilization of sugarcane under reduced tillage

    Directory of Open Access Journals (Sweden)

    Caio Fortes

    2013-01-01

    Full Text Available The objective of this work was to evaluate the agroindustrial production of sugarcane (millable stalks and sucrose yield after successive nitrogen fertilizations of plant cane and ratoons in a reduced tillage system. The experiment was carried out at Jaboticabal, SP, Brazil, on a Rhodic Eutrustox soil, during four consecutive crop cycles (March 2005 to July 2009. Plant cane treatments consisted of N-urea levels (control, 40, 80, and 120 kg ha-1 N + 120 kg ha-1 P2O5 and K2O in furrow application. In the first and second ratoons, the plant cane plots were subdivided in N-ammonium nitrate treatments (control, 50, 100, and 150 kg ha-1 N + 150 kg ha-1 K2O as top dressing over rows. In the third ratoon, N fertilization was leveled to 100 kg ha-1 in all plots, including controls, to detect residual effects of previous fertilizations on the last crop's cycle. Sugarcane ratoon was mechanically harvested. A weighing truck was used to evaluate stalk yield (TCH, and samples were collected in the field for analysis of sugar content (TSH. Increasing N doses and meteorological conditions promote significant responses in TCH and TSH in cane plant and ratoons, in the average and accumulated yield of the consecutive crop cycles.

  17. Plasmonic coaxial Fabry-Pérot nanocavity color filter

    Science.gov (United States)

    Si, G. Y.; Leong, E. S. P.; Danner, A. J.; Teng, J. H.

    2010-08-01

    Plamonic coaxial structures have drawn considerable attetion recently because of their unique properties. They exhibit different mechanisms of extraordinary optical transmission observed from subwavelength holes and they can support localized Fabry-Pérot plasmon modes. In this work, we experimentally demonstrate color filters based on coaxial structures fabricated in optically thick metallic films. Using nanogaps with different apertures from 160 nm down to only 40 nm, we show varying color outputs when the annular aperture arrays are illuminated with a broadband light source. Effective color-filter function is demonstrated in the optical regime. Different color outputs are observed and optical spectra are measured. In such structures, it is the propagating mode playing an important role rather than the evanescent. Resonances depend strongly on ring apertures, enabling devices with tunability of output colors using simple geometry control.

  18. Stem base rot of winter wheat by Fusarium spp. - causes and effects

    Directory of Open Access Journals (Sweden)

    Małgorzata Narkiewicz-Jodko

    2012-12-01

    Full Text Available The aim of the work was to determine the influence of weather conditions and a degree of weed infestation on the incidence of stem bases rot (Fusarium spp. of winter wheat cultivars as well as their yield. The winter wheat cultivars (Kobra, Korweta, Mikon, Zyta were investigated (2000-2002 in the field where the following herbicides: Apyros 75 WG + Atpolan, Affinity 50,75 WG, Attribut 70 WG were applied. It has been shown the occurrence of stem base rot (Fusarium spp. depended mainly on weather conditions. The application of the herbicides improved the plant health. The stem base rot on winter wheat was caused by Fusarium spp., specially F. culmorum. The decrease in winter wheat yield depended on weather conditions, weed infestation and the occurrence of stem base rot (Fusarium spp..

  19. CHARACTERIZATION OF WOOD DECAY BY ROT FUNGI USING COLORIMETRY AND INFRARED SPECTROSCOPY

    Directory of Open Access Journals (Sweden)

    Mírian de Almeida Costa

    2011-09-01

    Full Text Available Wood samples of marupá (Simarouba amara and andiroba (Carapa guianenis were submitted to Trametes versicolor (white rot and Gloeophylum trabeum (brown rot fungi attack. Colorimetry was used to determine the color of the wood before and after wood decaying fungi. To evaluate the changes in chemical compounds levels in the wood samples, the diffuse reflectance medium infrared spectroscopy was used. Both wood were non resistant against white rot fungus, while with brown rot attack andiroba was resistant and marupá was not. After Gloeophyllum trabeum attack both woods changed to a darken color, and after Trametes versicolor attack andiroba changed to a lighter color and marupá darkened slightly, The analysis showed a reduction in the peak intensity of cellulose, hemicellulose and lignin, for both species, after Trametes versicolor attack and a reduction in the peak intensity of cellulose after Gloeophyllum trabeum attack.

  20. Efficacy of four plant extracts in the control of root rot disease of ...

    African Journals Online (AJOL)

    Garcinia cola) and neem (Azadirachta indica) extracts in the control of root rot of cowpea caused by Pythium aphanidermatum was carried out in vitro and in the field (in vivo). They were evaluated for their antifungal activity over P.

  1. Biodegradation of hazardous waste using white rot fungus: Project planning and concept development document

    International Nuclear Information System (INIS)

    Luey, J.; Brouns, T.M.; Elliott, M.L.

    1990-11-01

    The white rot fungus Phanerochaete chrysosporium has been shown to effectively degrade pollutants such as trichlorophenol, polychlorinated biphenyls (PCBs), dioxins and other halogenated aromatic compounds. These refractory organic compounds and many others have been identified in the tank waste, groundwater and soil of various US Department of Energy (DOE) sites. The treatment of these refractory organic compounds has been identified as a high priority for DOE's Research, Development, Demonstration, Testing, and Evaluation (RDDT ampersand E) waste treatment programs. Unlike many bacteria, the white rot fungus P. chrysosporium is capable of degrading these types of refractory organics and may be valuable for the treatment of wastes containing multiple pollutants. The objectives of this project are to identify DOE waste problems amenable to white rot fungus treatment and to develop and demonstrate white rot fungus treatment process for these hazardous organic compounds. 32 refs., 6 figs., 7 tabs

  2. First Report of Postharvest Gray Mold Rot on Carrot Caused by Botrytis cinerea in Korea

    Directory of Open Access Journals (Sweden)

    Md. Aktaruzzaman

    2014-06-01

    Full Text Available In February 2014, gray mold rotting symptoms were observed in carrots in cold storage at Gangneung, Gangwon province, Korea. The typical symptom of gray mold rot showed abundant blackish gray mycelia and conidia was observed on the infected root. The pathogen was isolated from infected root and cultured on PDA for further fungal morphological observation and confirming its pathogenicity according to Koch’s postulates. Results of morphological data, pathogenicity test and rDNA internal transcribed spacer (ITS 1 and 4 sequence showed that the postharvest gray mold rot of carrot was caused by Botyrtis cinerea. This is the first report of postharvest gray mold rot on carrot in Korea.

  3. Zwalczanie zgnilizny powodowanej przez grzyby z rodzaju Penicillium [Control of Penicillium apple rot

    Directory of Open Access Journals (Sweden)

    H. Borecka

    2015-06-01

    Full Text Available Control of Pezicula spp. fungi reduced Penicillium apple rot. The Penicillium apple rot process began slowly under the modified atmosphere of 5% CO2 and 3% O2. The lower concentration of Benlate – 0.05% did not influence this fungicide's effectiveness, The lower concentration– 0.05% of Topsin M decreased the effectiveness of this fungicide. The resistant strains of Penicillium spp. to benzimidazole fungicides under laboratory conditions were obtained.

  4. Molecular diagnosis of Phytophthora cinnamomi associated with root rot in avocado producing areas of Ecuador

    OpenAIRE

    Diana Elizabeth Toapanta-Gallegos; Luis Eduardo Morillo-Velastegui; William Fernando Viera-Arroyo

    2017-01-01

    One of the most damaging diseases in cultivation of avocado (Persea americana Mill.) is root rot associated with Phytophthora cinnamomi Rands. This disease causes progressive wilt and even death of the tree. The objective of this study was to identify the presence of P. cinnamomi in two productive areas of avocado in Ecuador using the molecular technique PCR-RFLP. Tree root samples were obtained with root rot symptoms in the production areas,...

  5. Distribution and prevalence of crown rot pathogens affecting wheat crops in southern Chile

    Directory of Open Access Journals (Sweden)

    Ernesto Moya-Elizondo

    2015-03-01

    Full Text Available Crown rot pathogens are associated with higher losses for wheat crop farmers, but information about the distribution and prevalence of these pathogens in Chile is inadequate. Distribution and prevalence of wheat (Triticum aestivum L. crown rot pathogens were examined in a survey of 48 commercial fields from December 2011 to February 2012 in southern Chile. These fields were located between Collipulli (37°56'00" S; 72°26'39" W and Purranque (40°50'30" S; 73°22'03" W. Severity of crown rot disease was determined through visual assessment of the first internode of 20 tillers obtained from each field. Incidence of crown rot pathogens per field was determined by plating the 20 tillers on Petri plates with 20% potato dextrose agar amended with lactic acid (aPDA medium. Resulting fungal colonies from monoxenic culture were identified by morphological or molecular-assisted identification. Severity of crown rot varied between 11.3% and 80% for individual fields. Culture plate analysis showed 72.2% of stems were infected with some fungus. Fusarium avenaceum, F. graminearum, and F. culmorum, pathogens associated with Fusarium crown rot disease were isolated from 13.5% of tillers. Gaeumannomyces graminis, causal agent of take-all disease in cereals, was isolated from 11.1% of culms. Phaeosphaeria sp., an endophyte and possibly a non-pathogenic fungus, was isolated from 13.9% of tillers. Pathogenic fungi such as Rhizoctonia spp. and Microdochium nivale, other saprophyte, and several unidentified non-sporulating fungi were isolated at frequencies lower than 3% of the total. Fusarium crown rot and take-all were the most prevalent and distributed crown rot diseases present in wheat crops in southern Chile.

  6. Thermal control of some post-harvest rot pathogens of Irish potato (solanum tuberosum l.)

    OpenAIRE

    Salami Olusola Abiodun; Popoola Omololu Olumide

    2007-01-01

    Thermal control effect on the incidence of some post-harvest rot pathogens of Solanum tuberosum (potato) was investigated in this study. Three cultivars of potato tuber whose local names are, Patiska, Mai Bawondoya and Nicola were used for the study. Five pathogenic fungi viz: Botryodiplodia theobromae, Fusarium redolens, Fusarium oxysporum, Penicillium sp. and Rhizopus oryzae associated with post harvest storage rot of root-tubers, were isolated from diseased potatoes. Among the three specie...

  7. First Report of Sclerotium Rot on Cymbidium Orchids Caused by Sclerotium rolfsii in Korea

    Science.gov (United States)

    Lee, Seong-Chan; Lee, Jung-Sup; Soh, Jae-Woo; Kim, Su

    2012-01-01

    Sclerotium rot was found on Cymbidium orchids at Seosan-si, Chungcheongnam-do, Korea, in July, 2010. Symptoms occurred on low leaves, which turned yellowish, after which the entire plant wilted. Severely infected plants were blighted and eventually died. White mycelial mats and sclerotia appeared on pseudobulbs. Based on the mycological characteristics and pathogenicity, the causal fungus was identified as Sclerotium rolfsii. This is the first report of new Sclerotium rot on Cymbidium spp. caused by S. rolfsii in Korea. PMID:23323053

  8. Identification of Quorum Quenching Bacteria and Its Biocontrol Potential Against Soft Rot Disease Bacteria, Dickeya Dadantii

    OpenAIRE

    Khoiri, Syaiful; Damayanti, Tri Asmira; Giyanto, Giyanto

    2017-01-01

    Dickeya dadantii is one of newly found bacteria causing soft rot on orchids in Indonesia. Infected plants showed severe rot rapidly only in few days. An effort to control the bacteria was conducted by utilizing selected quorum quenching (QQ) inducer bacteria which produce AHL-lactonase by aiiA gene. The aims of this research were to screen and identify of quorum quenching bacteria, and also assayed their biocontrol potential ability against D. dadantii in laboratory. The screening of QQ bacte...

  9. No Reported Species, Botrytis aclada Causing Gray Mold Neck Rot Disease on Onion Bulbs in Korea

    OpenAIRE

    Hwang, Sun–Kyoung; Lee, Seung–Yeol; Back, Chang–Gi; Kang, In–Kyu; Lee, Hyang–Burm; Jung, Hee-Young; Ohga, Shoji; Oga, Shoji

    2016-01-01

    Gray mold neck rot was observed on onion bulbs (Allium cepa L.) in low–temperature warehouses in Changnyeong–gun, Korea. The causative pathogen was isolated from rotted onion bulb lesions and identified as Botrytis aclada based on morphological and culture characteristics, the sequences of three nuclear genes (G3PDH, HSP60, and RPB2), and polymerase chain reaction–restriction fragment length polymorphism (PCR–RFLP) for Botrytis spp. identification. Although onion gray mold disease caused by B...

  10. First Report of Postharvest Gray Mold Rot on Carrot Caused by Botrytis cinerea in Korea

    OpenAIRE

    Md. Aktaruzzaman; Joon-Young Kim; Sheng-Jun Xu; Byung-Sup Kim

    2014-01-01

    In February 2014, gray mold rotting symptoms were observed in carrots in cold storage at Gangneung, Gangwon province, Korea. The typical symptom of gray mold rot showed abundant blackish gray mycelia and conidia was observed on the infected root. The pathogen was isolated from infected root and cultured on PDA for further fungal morphological observation and confirming its pathogenicity according to Koch’s postulates. Results of morphological data, pathogenicity test and rDNA internal transcr...

  11. Effectiveness of Neutral Electrolyzed Water on Incidence of Fungal Rot on Tomato Fruits ( Solanum lycopersicum L.).

    Science.gov (United States)

    Vásquez-López, Alfonso; Villarreal-Barajas, Tania; Rodríguez-Ortiz, Gerardo

    2016-10-01

    We assessed the effect of neutral electrolyzed water (NEW) on the incidence of rot on tomato ( Solanum lycopersicum L.) fruits inoculated with Fusarium oxysporum , Galactomyces geotrichum , and Alternaria sp. at sites with lesions. The inoculated fruits were treated with NEW at 10, 30, and 60 mg liter -1 active chlorine, with copper oxychloride fungicide, and with sterile distilled water (control) for 3, 5, and 10 min. In the experiment with F. oxysporum , 50 to 80% of the control fruits and 50 to 60% of the fruits treated with the fungicide exhibited symptoms of rot at the inoculated sites. The lowest incidence recorded was 30% for fruits treated with NEW at 60 mg liter -1 active chlorine with an immersion time of 5 min. In the experiment with G. geotrichum , incidence of rot on control fruits was 70 to 90%, and for treatment with fungicide rot incidence was 50 to 90%. NEW at 60 mg liter -1 active chlorine significantly reduced incidence of symptomatic fruit: only 30% of the inoculated fruits washed for 5 min had damage from rot. In the experiment with Alternaria sp., 60 to 90% of the fruits in the control group and 60 to 70% of the fruits in the fungicide group were symptomatic. The lowest incidence was recorded for the treatment in which the fruits were submerged in NEW with 60 mg liter -1 active chlorine for 3 min. In this group, 40 to 50% of the fruits exhibited symptoms of rot. These results were obtained 8 days after inoculation. NEW, with 60 mg liter -1 active chlorine, significantly reduced incidence of rot symptoms on fruits inoculated with one of the experimental fungi relative to the control (P ≤ 0.05). NEW at 60 mg liter -1 is effective in the control of fungal rot in tomatoes.

  12. Zwalczanie zgnilizny powodowanej przez grzyby z rodzaju Penicillium [Control of Penicillium apple rot

    OpenAIRE

    H. Borecka

    2015-01-01

    Control of Pezicula spp. fungi reduced Penicillium apple rot. The Penicillium apple rot process began slowly under the modified atmosphere of 5% CO2 and 3% O2. The lower concentration of Benlate – 0.05% did not influence this fungicide's effectiveness, The lower concentration– 0.05% of Topsin M decreased the effectiveness of this fungicide. The resistant strains of Penicillium spp. to benzimidazole fungicides under laboratory conditions were obtained.

  13. Root rot diseases of sugarbeet (Beta vulgaris L as affected by defloliation intensity

    Directory of Open Access Journals (Sweden)

    Karadimos Dimitros A.

    2006-01-01

    Full Text Available The aim of this work was to study the effect of sugar beet re-growth after water stress defoliation on root rots of three cultivars (Europa, Rival Corsica, which were spring sown in Thessaly, central Greece, for two growing seasons (2003-04. At the beginning of July, sugar beets were subjected to water deficit with irrigation withholding. A month later, three defoliation levels (control - C, moderate - MD, severe - SD and irrigation were applied. Thus, sugar beets were forced to re-grow and three harvests (15, 30 and 40 days after defoliation - DAD were conducted. Rotted roots per hectare were counted and pathogens were identified. Data were analyzed as a four-factor randomized complete block design with years, defoliation levels, sampling times and cultivars as main factors. The number of rotted roots was increased with the defoliation level and was significantly higher for SD sugar beets (3748 roots ha–1. No significant differences were found between C and MD treatments (1543 and 2116 roots ha–1, respectively. Rival was the most susceptible cultivar to root rots. Sugar beets were more susceptible to rotting 15 and 40 DAD (2778 and 2998 roots ha–1. The causal agents of root rots were the fungi, Fusarium spp., Rhizopus stolonifer, Macrophomina phaseolina and Rhizoctonia solani.

  14. Soft rot decay capabilities and interactions of fungi and bacteria from fumigated utility poles

    Energy Technology Data Exchange (ETDEWEB)

    Wang, C.J.K.; Worrall, J.J. (State Univ. of New York, Syracuse, NY (United States). Coll. of Environmental Science and Forestry)

    1992-11-01

    The objectives were to (1) identify microfungi and bacterial associates isolated from fumigated southern pine poles from EPRI project RP 1471-72, (2) study the soft-rot capabilities of predominant fungi, and (3) study interactions among microorganisms in relation to wood decay. Methods for identification followed standard techniques using morphological and physiological criteria. Soft-rot by microfungi alone and with bacteria was determined as weight loss and anatomical examination of wood blocks using light microscopy and limited electron microscopy. Acinetobacter calcoaceticus was the predominant bacterium. Twenty-one species of microfungi were identified including four new species. A book entitled IDENTIFICATION MANUAL FOR FUNGI FROM UTILITY POLES IN THE EASTERN UNITED STATES was published. An improved soft-rot test was devised. Fifty-one of 84 species (60%) of microfungi from poles tested were soft-rot positive; that is much greater than previously reported. Three types of anatomical damage of wood of pine or birch caused by soft-rot fungi were described. Interaction tests showed that, in some cases, there was a strong synergism between bacteria and fungi in causing weight loss, but results were inconsistent. Although soft rot is often most apparent under conditions of very high moisture, intermediate moisture levels appear to be optimal, as with basidiomycete decayers.

  15. Soft rot decay capabilities and interactions of fungi and bacteria from fumigated utility poles

    International Nuclear Information System (INIS)

    Wang, C.J.K.; Worrall, J.J.

    1992-11-01

    The objectives were to (1) identify microfungi and bacterial associates isolated from fumigated southern pine poles from EPRI project RP 1471-72, (2) study the soft-rot capabilities of predominant fungi, and (3) study interactions among microorganisms in relation to wood decay. Methods for identification followed standard techniques using morphological and physiological criteria. Soft-rot by microfungi alone and with bacteria was determined as weight loss and anatomical examination of wood blocks using light microscopy and limited electron microscopy. Acinetobacter calcoaceticus was the predominant bacterium. Twenty-one species of microfungi were identified including four new species. A book entitled IDENTIFICATION MANUAL FOR FUNGI FROM UTILITY POLES IN THE EASTERN UNITED STATES was published. An improved soft-rot test was devised. Fifty-one of 84 species (60%) of microfungi from poles tested were soft-rot positive; that is much greater than previously reported. Three types of anatomical damage of wood of pine or birch caused by soft-rot fungi were described. Interaction tests showed that, in some cases, there was a strong synergism between bacteria and fungi in causing weight loss, but results were inconsistent. Although soft rot is often most apparent under conditions of very high moisture, intermediate moisture levels appear to be optimal, as with basidiomycete decayers

  16. Prediction of postoperative diabetes insipidus using morphological hyperintensity patterns in the pituitary stalk on magnetic resonance imaging after transsphenoidal surgery for sellar tumors.

    Science.gov (United States)

    Hayashi, Yasuhiko; Kita, Daisuke; Watanabe, Takuya; Fukui, Issei; Sasagawa, Yasuo; Oishi, Masahiro; Tachibana, Osamu; Ueda, Fumiaki; Nakada, Mitsutoshi

    2016-12-01

    Diabetes insipidus (DI) remains a complication of transsphenoidal surgery (TSS) for sellar and parasellar tumors. Antidiuretic hormone (ADH) appears as hyper intensity (HI) in the pituitary stalk and the posterior lobe of the pituitary gland on T1-weighted magnetic resonance (MR) imaging. Its disappearance from the posterior lobe occurs with DI, indicating a lack of ADH. The appearance of HI in the pituitary stalk indicates disturbances in ADH transport. This retrospective study included 172 patients undergoing TSS for sellar tumors at our institute from 2006 to 2014. Sequential T1-weighted MR images without enhancement were evaluated for HI in the pituitary stalk and the posterior lobe to assess the localization of ADH before and at intervals after TSS. DI was assessed pre- and postoperatively. HI in the pituitary stalk showed the following morphology: (1) ovoid in the distal end of the pituitary stalk (group A), (2) linear in the distal part of the pituitary stalk (group B), (3) linear in the whole pituitary stalk (group C). Preoperative DI occurred in 6 patients (3.5 %) with no HI observed in the posterior lobe. Postoperative DI was transient in 82 patients (47.7 %), and permanent in 11 (6.4 %). One week after surgery, HI was absent in the posterior lobe in 74 patients (43.0 %), and present in the pituitary stalk in 99 patients (57.6 %); both were significantly correlated with postoperative DI (p < 0.001). The absence of HI in the posterior lobe (A, 48.9 %; B, 68.3 %; C, 92.3 %), persistence of DI (A, 3.7 days; B, 45.9 days; C, 20.5 months), and duration until HI recovery in the posterior lobe (A, 3.6 months; B, 6.8 months; C, 22.9 months) were greatest in group C, followed by group B, and then group A. Fourteen group A patients did not have postoperative DI despite having HI in the pituitary stalk and the posterior lobe. Four group C patients developed permanent DI with persistence HI in the pituitary stalk. HI in the pituitary stalk and its

  17. Modeling of kinetics of Cr(VI) sorption onto grape stalk waste in a stirred batch reactor

    International Nuclear Information System (INIS)

    Escudero, Carlos; Fiol, Nuria; Poch, Jordi; Villaescusa, Isabel

    2009-01-01

    Recently, Cr(VI) removal by grape stalks has been postulated to follow two mechanisms, adsorption and reduction to trivalent chromium. Nevertheless, the rate at which both processes take place and the possible simultaneity of both processes has not been investigated. In this work, kinetics of Cr(VI) sorption onto grape stalk waste has been studied. Experiments were carried out at different temperatures but at a constant pH (3 ± 0.1) in a stirred batch reactor. Results showed that three steps take place in the process of Cr(VI) sorption onto grape stalk waste: Cr(VI) sorption, Cr(VI) reduction to Cr(III) and the adsorption of the formed Cr(III). Taking into account the evidences above mentioned, a model has been developed to predict Cr(VI) sorption on grape stalks on the basis of (i) irreversible reduction of Cr(VI) to Cr(III) reaction, whose reaction rate is assumed to be proportional to the Cr(VI) concentration in solution and (ii) adsorption and desorption of Cr(VI) and formed Cr(III) assuming that all the processes follow Langmuir type kinetics. The proposed model fits successfully the kinetic data obtained at different temperatures and describes the kinetics profile of total, hexavalent and trivalent chromium. The proposed model would be helpful for researchers in the field of Cr(VI) biosorption to design and predict the performance of sorption processes.

  18. Modeling of kinetics of Cr(VI) sorption onto grape stalk waste in a stirred batch reactor

    Energy Technology Data Exchange (ETDEWEB)

    Escudero, Carlos, E-mail: u1058115@correu.udg.edu [Department of Chemical Engineering, Escola Politecnica Superior, Universitat de Girona, Avda. Lluis Santalo s/n, 17002 Girona (Spain); Fiol, Nuria, E-mail: nuria.fiol@udg.edu [Department of Chemical Engineering, Escola Politecnica Superior, Universitat de Girona, Avda. Lluis Santalo s/n, 17002 Girona (Spain); Poch, Jordi, E-mail: Jordi.poch@udg.edu [Department of Applied Mathematics, Escola Politecnica Superior, Universitat de Girona, Avda. Lluis Santalo s/n, 17002 Girona (Spain); Villaescusa, Isabel [Department of Chemical Engineering, Escola Politecnica Superior, Universitat de Girona, Avda. Lluis Santalo s/n, 17002 Girona (Spain)

    2009-10-15

    Recently, Cr(VI) removal by grape stalks has been postulated to follow two mechanisms, adsorption and reduction to trivalent chromium. Nevertheless, the rate at which both processes take place and the possible simultaneity of both processes has not been investigated. In this work, kinetics of Cr(VI) sorption onto grape stalk waste has been studied. Experiments were carried out at different temperatures but at a constant pH (3 {+-} 0.1) in a stirred batch reactor. Results showed that three steps take place in the process of Cr(VI) sorption onto grape stalk waste: Cr(VI) sorption, Cr(VI) reduction to Cr(III) and the adsorption of the formed Cr(III). Taking into account the evidences above mentioned, a model has been developed to predict Cr(VI) sorption on grape stalks on the basis of (i) irreversible reduction of Cr(VI) to Cr(III) reaction, whose reaction rate is assumed to be proportional to the Cr(VI) concentration in solution and (ii) adsorption and desorption of Cr(VI) and formed Cr(III) assuming that all the processes follow Langmuir type kinetics. The proposed model fits successfully the kinetic data obtained at different temperatures and describes the kinetics profile of total, hexavalent and trivalent chromium. The proposed model would be helpful for researchers in the field of Cr(VI) biosorption to design and predict the performance of sorption processes.

  19. Modeling of kinetics of Cr(VI) sorption onto grape stalk waste in a stirred batch reactor.

    Science.gov (United States)

    Escudero, Carlos; Fiol, Nuria; Poch, Jordi; Villaescusa, Isabel

    2009-10-15

    Recently, Cr(VI) removal by grape stalks has been postulated to follow two mechanisms, adsorption and reduction to trivalent chromium. Nevertheless, the rate at which both processes take place and the possible simultaneity of both processes has not been investigated. In this work, kinetics of Cr(VI) sorption onto grape stalk waste has been studied. Experiments were carried out at different temperatures but at a constant pH (3+/-0.1) in a stirred batch reactor. Results showed that three steps take place in the process of Cr(VI) sorption onto grape stalk waste: Cr(VI) sorption, Cr(VI) reduction to Cr(III) and the adsorption of the formed Cr(III). Taking into account the evidences above mentioned, a model has been developed to predict Cr(VI) sorption on grape stalks on the basis of (i) irreversible reduction of Cr(VI) to Cr(III) reaction, whose reaction rate is assumed to be proportional to the Cr(VI) concentration in solution and (ii) adsorption and desorption of Cr(VI) and formed Cr(III) assuming that all the processes follow Langmuir type kinetics. The proposed model fits successfully the kinetic data obtained at different temperatures and describes the kinetics profile of total, hexavalent and trivalent chromium. The proposed model would be helpful for researchers in the field of Cr(VI) biosorption to design and predict the performance of sorption processes.

  20. Production of charcoal briquettes from cotton stalk in malawi: methodology for feasibility studies using experiences in Sudan

    NARCIS (Netherlands)

    Onaji, P.B.; Siemons, R.V.

    1993-01-01

    The feasibility of charcoal production from cotton stalks in Malawi was studied based on experience from Sudan. The country relies considerably on biomass fuels. Of the total energy consumption in Malawi of 2.376 MTOE in 1989, 92% was met by biomass (fuelwood: 83.6% and charcoal: 8.3% Petroleum

  1. Ensiling characteristics of distillers wet grains with corn stalks and determination of the feeding potential for dairy heifers

    Science.gov (United States)

    The characteristics and feeding potential of corn distillers wet grains with solubles (DWGS) ensiled with corn stalks (CS) were evaluated in a two-part experiment. A mix of 66.7 % DWGS and 33.3 % CS (as-fed) was ensiled in two plastic silage bags. One silage bag was left untreated (UNT) and the othe...

  2. Determining the minimum conditions for soda-anthraquinone pulping of kenaf bast, core, and whole stalk fibers

    Science.gov (United States)

    James S. Han; Thomas A. Rymsza

    1999-01-01

    Chemical pulping of kenaf fiber is comparatively new. In this study, bast, core, and whole stalk kenaf fibers were pulped using a soda-AQ pulping process and various pulping conditions. Handsheets were evaluated for density, Canadian standard freeness, brightness, opacity, smoothness, and tensile, burst, and tear indexes and strength. The results indicate that...

  3. Shea meal and cotton stalk as potential fuels for co-combustion with coal.

    Science.gov (United States)

    Munir, S; Nimmo, W; Gibbs, B M

    2010-10-01

    The efficient management of waste biomass is an important environmental problem in agricultural countries. Often land-fill is the main disposal route with ramifications including CH(4) release having 21 times greater global warming potential per molecule than CO(2). Biomasses are considered to be CO(2)-neutral fuels when combusted. Moreover, they are renewable and covered by the renewable obligation scheme and eligible for certificates in the UK. The overall objective of the investigation is to assess the performance of selected biomass and coal co-firing under two different modes of operation, air-staging and fuel-staging with the benefit of reduced-NO(x) and SO(2) emissions in power plant. The biomasses chosen for the study, shea meal (SM) and cotton stalk (CS) have very different cellulose/lignin compositions and different reported thermal behaviour. A series of experiments have been carried out in a 20 kW, down fired combustor using coal, shea meal-coal and cotton stalk-coal blends under un-staged, air-staged and fuel-staged co-combustion configurations. For air-staging, an optimum value of primary zone stoichiometry SR(1)=0.9 was found. Keeping it fixed, the shea meal and cotton stalk content in the coal-biomass blends was set to 5%, 10% and 15% on thermal basis. NO reductions of 51% and 60% were achieved using SM and CS, respectively, with an optimum thermal biomass blending ratio (BBR) of 10%. The results obtained were compared with un-staged and air-staged results for coal without the addition of biomass. Similarly for fuel-staging, keeping the length of the reburn and burnout zone fixed, SM and CS were evaluated as reductive fuel using different reburn fuel fractions (R(ff)) of 5%, 10%, 15% and 20%. NO reductions of 83% and 84% were obtained with an optimum R(ff) of 15% with an optimum reburn zone stoichiometry of SR(2)=0.8 for both SM and CS, respectively. SO(2) reduction and char burnout efficiency were also evaluated. It was found that addition of

  4. Genetic Architecture of Charcoal Rot (Macrophomina phaseolina Resistance in Soybean Revealed Using a Diverse Panel

    Directory of Open Access Journals (Sweden)

    Sara M. Coser

    2017-09-01

    Full Text Available Charcoal rot (CR disease caused by Macrophomina phaseolina is responsible for significant yield losses in soybean production. Among the methods available for controlling this disease, breeding for resistance is the most promising. Progress in breeding efforts has been slow due to the insufficient information available on the genetic mechanisms related to resistance. Genome-wide association studies (GWAS enable unraveling the genetic architecture of resistance and identification of causal genes. The aims of this study were to identify new sources of resistance to CR in a collection of 459 diverse plant introductions from the USDA Soybean Germplasm Core Collection using field and greenhouse screenings, and to conduct GWAS to identify candidate genes and associated molecular markers. New sources for CR resistance were identified from both field and greenhouse screening from maturity groups I, II, and III. Five significant single nucleotide polymorphism (SNP and putative candidate genes related to abiotic and biotic stress responses are reported from the field screening; while greenhouse screening revealed eight loci associated with eight candidate gene families, all associated with functions controlling plant defense response. No overlap of markers or genes was observed between field and greenhouse screenings suggesting a complex molecular mechanism underlying resistance to CR in soybean with varied response to different environments; but our findings provide useful information for advancing breeding for CR resistance as well as the genetic mechanism of resistance.

  5. Saccharification of Lignocelluloses by Carbohydrate Active Enzymes of the White Rot Fungus Dichomitus squalens.

    Directory of Open Access Journals (Sweden)

    Johanna Rytioja

    Full Text Available White rot fungus Dichomitus squalens is an efficient lignocellulose degrading basidiomycete and a promising source for new plant cell wall polysaccharides depolymerizing enzymes. In this work, we focused on cellobiohydrolases (CBHs of D. squalens. The native CBHI fraction of the fungus, consisting three isoenzymes, was purified and it maintained the activity for 60 min at 50°C, and was stable in acidic pH. Due to the lack of enzyme activity assay for detecting only CBHII activity, CBHII of D. squalens was produced recombinantly in an industrially important ascomycete host, Trichoderma reesei. CBH enzymes of D. squalens showed potential in hydrolysis of complex lignocellulose substrates sugar beet pulp and wheat bran, and microcrystalline cellulose, Avicel. Recombinant CBHII (rCel6A of D. squalens hydrolysed all the studied plant biomasses. Compared to individual activities, synergistic effect between rCel6A and native CBHI fraction of D. squalens was significant in the hydrolysis of Avicel. Furthermore, the addition of laccase to the mixture of CBHI fraction and rCel6A significantly enhanced the amount of released reducing sugars from sugar beet pulp. Especially, synergy between individual enzymes is a crucial factor in the tailor-made enzyme mixtures needed for hydrolysis of different plant biomass feedstocks. Our data supports the importance of oxidoreductases in improved enzyme cocktails for lignocellulose saccharification.

  6. In vitro growth and cell wall degrading enzyme production by Argentinean isolates of Macrophomina phaseolina, the causative agent of charcoal rot in corn.

    Science.gov (United States)

    Ramos, Araceli M; Gally, Marcela; Szapiro, Gala; Itzcovich, Tatiana; Carabajal, Maira; Levin, Laura

    Macrophomina phaseolina is a polyphagous phytopathogen, causing stalk rot on many commercially important species. Damages caused by this pathogen in soybean and maize crops in Argentina during drought and hot weather have increased due its ability to survive as sclerotia in soil and crop debris under non-till practices. In this work, we explored the in vitro production of plant cell wall-degrading enzymes [pectinases (polygalacturonase and polymethylgalacturonase); cellulases (endoglucanase); hemicellulases (endoxylanase) and the ligninolytic enzyme laccase] by several Argentinean isolates of M. phaseolina, and assessed the pathogenicity of these isolates as a preliminary step to establish the role of these enzymes in M. phaseolina-maize interaction. The isolates were grown in liquid synthetic medium supplemented with glucose, pectin, carboxymethylcellulose or xylan as carbon sources and/or enzyme inducers and glutamic acid as nitrogen source. Pectinases were the first cell wall-degrading enzymes detected and the activities obtained (polygalacturonase activity was between 0.4 and 1.3U/ml and polymethylgalacturonase between 0.15 and 1.3U/ml) were higher than those of cellulases and xylanases, which appeared later and in a lesser magnitude. This sequence would promote initial tissue maceration followed by cell wall degradation. Laccase was detected in all the isolates evaluated (activity was between 36U/l and 63U/l). The aggressiveness of the isolates was tested in maize, sunflower and watermelon seeds, being high on all the plants assayed. This study reports for the first time the potential of different isolates of M. phaseolina to produce plant cell wall-degrading enzymes in submerged fermentation. Copyright © 2016 Asociación Argentina de Microbiología. Publicado por Elsevier España, S.L.U. All rights reserved.

  7. Morphoanatomy and histochemistry analyses of cassava roots do not discriminate resistant from susceptible genotypes to soft root rot

    OpenAIRE

    SILVA, Jonny Lucio Sousa; MOURA, Elisa Ferreira; ILKIU-BORGES, Fernanda; GALVÃO, Jessivaldo Rodrigues; FARIAS-NETO, João Tomé de; SILVA, Gisele Barata da; RÊGO, Marcela Cristiane Ferreira; CUNHA, Roberto Lisboa

    2017-01-01

    ABSTRACT Cassava is an important culture in Brazil and in the North of the country, and soft root rot has affected root production. The aim of this work was to identify root morphoanatomic and histochemical characters associated with root rot resistance. In areas with no occurrence of the disease, nine cassava genotypes were tested, four of which were resistant, and five were susceptible to root rot. Root harvest was carried out twelve months after sowing, and thickness of suber, suber and co...

  8. Microbial pretreatment of cotton stalks by Phanerochaete chrysosporium for bioethanol production

    Science.gov (United States)

    Shi, Jian

    Lignocellulosic biomass has been recognized as a widespread, potentially low cost renewable source of mixed sugars for fermentation to fuel ethanol. Pretreatment, as the first step towards conversion of lignocellulose to ethanol, remains one of the main barriers to technical and commercial success of the processing technology. Existing pretreatment methods have largely been developed on the basis of physiochemical technologies which are considered relatively expensive and usually involve adverse environmental impacts. In this study, an environmentally benign alternative, microbial pretreatment using Phanerochaete chrysosporium, was explored to degrade lignin in cotton stalks and facilitate their conversion into ethanol. Two submerged liquid pretreatment techniques (SmC), shallow stationary and agitated cultivation, at three inorganic salt concentrations (no salts, modified salts without Mn2+, modified salts with Mn2+) were compared by evaluating their pretreatment efficiencies. Shallow stationary cultivation with no salt was superior to other pretreatment conditions and gave 20.7% lignin degradation along with 76.3% solids recovery and 29.0% carbohydrate availability over a 14 day period. The influence of substrate moisture content (65%, 75% and 80% M.C. wet-basis), inorganic salt concentration (no salts, modified salts without Mn2+ , modified salts with Mn2+) and culture time (0-14 days) on pretreatment effectiveness in solid state (SSC) systems was also examined. It was shown that solid state cultivation at 75% M.C. without salts was the most preferable pretreatment resulting in 27.6% lignin degradation, 71.1% solids recovery and 41.6% carbohydrate availability over a period of 14 days. A study on hydrolysis and fermentation of cotton stalks treated microbially using the most promising SmC (shallow stationary, no salts) and SSC (75% moisture content, no salts) methods resulted in no increase in cellulose conversion with direct enzyme application (10.98% and 3

  9. The impact of pulsed electric fields and ultrasound on water distribution and loss in mushrooms stalks.

    Science.gov (United States)

    Dellarosa, Nicolò; Frontuto, Daniele; Laghi, Luca; Dalla Rosa, Marco; Lyng, James G

    2017-12-01

    Pulsed electric fields (PEF) and ultrasound (US) are promising innovative technologies with the potential to increase mass transfer when combined with further processes which in turn can provide potential benefits in the recovery of valuable compounds from food by-products. To provide evidence of the mechanism of mass transfer enhancement, the present study assessed the impact of PEF and US treatments, applied individually and in combination, at low and high temperatures, on the tissue microstructure of mushroom stalks. Different indices such as quantitative water redistribution, water loss and qualitative release of compounds were evaluated. The combination of these physical methods demonstrated that PEF redistributed a greater proportion of intracellular water into extracellular spaces than US. However, the application of high temperature treatments alone showed an even greater proportion of intracellular water migration compared to PEF. When PEF was combined with US at low temperatures the difference was not significant. Copyright © 2017 Elsevier Ltd. All rights reserved.

  10. Identification and some properties of anthocyanin isolated from Zuiki, stalk of Colocasia esculenta.

    Science.gov (United States)

    Terasawa, Naoko; Saotome, Ayako; Tachimura, Yuki; Mochizuki, Ayumi; Ono, Hiroshi; Takenaka, Makiko; Murata, Masatsune

    2007-05-16

    Zuiki, a stalk of taro (Colocasia esculenta), is a traditional vegetable in Japan. Raw zuiki is often boiled and vinegared to eat. The surface color of zuiki is reddish. Here, we isolated a red pigment from zuiki and identified it as cyanidin 3-rutinoside using instrumental analyses. The color of zuiki disappeared by boiling, but the zuiki turned red again in an acetic acid solution. It seems that the cyanidin 3-rutinoside that exists on the surface of zuiki elutes in boiling water and then, the pigment that seeps out from the inside of the zuiki is exposed to an acid solution, and its surface turns red again. The radical scavenging activity of purified zuiki anthocyanin was 114 mg equivalent to BHT/g. About half of the anthocyanin in fresh zuiki was washed out by boiling, and the radical scavenging activity of zuiki was definitely reduced.

  11. Pyrolysis of corn stalk biomass briquettes in a scaled-up microwave technology.

    Science.gov (United States)

    Salema, Arshad Adam; Afzal, Muhammad T; Bennamoun, Lyes

    2017-06-01

    Pyrolysis of corn stalk biomass briquettes was carried out in a developed microwave (MW) reactor supplied with 2.45GHz frequency using 3kW power generator. MW power and biomass loading were the key parameters investigated in this study. Highest bio-oil, biochar, and gas yield of 19.6%, 41.1%, and 54.0% was achieved at different process condition. In terms of quality, biochar exhibited good heating value (32MJ/kg) than bio-oil (2.47MJ/kg). Bio-oil was also characterised chemically using FTIR and GC-MS method. This work may open new dimension towards development of large-scale MW pyrolysis technology. Copyright © 2017 Elsevier Ltd. All rights reserved.

  12. Removal of cadmium(II) from aqueous solution by corn stalk graft copolymers.

    Science.gov (United States)

    Zheng, Liuchun; Dang, Zhi; Zhu, Chaofei; Yi, Xiaoyun; Zhang, Hui; Liu, Congqiang

    2010-08-01

    Corn stalk was modified using graft copolymerization to produce absorbent (AGCS), which was characterized by elemental analysis, fourier transform infrared, X-ray diffraction, solid-state CP/MAS (13)C NMR spectra, thermogravimetric analysis and differential scanning calorimeter. AGCS, having cyano group (-CN) after grafted successfully, exhibits more high adsorption potential for Cd(II) than unmodified forms. The efficiency of AGCS for removal of cadmium ions was evaluated. Factors affecting Cd(II) adsorption such as pH value and adsorbent dosage were investigated. More than 90% removal was achieved at pH 3.0-7.0 and the adsorption increased from 16.0% to 99.2% with increase of adsorbent dose. In addition, two isotherm models, namely, Langmuir and Freunlich were also analyzed to determine the best fit equation for adsorption of Cd(II) on AGCS. (c) 2010 Elsevier Ltd. All rights reserved.

  13. Chemical constituents from roots and leaf stalks of acai (Euterpe precatoria Mart., Arecaceae)

    International Nuclear Information System (INIS)

    Galotta, Ana Lucia Queiroz de Assis; Boaventura, Maria Amelia Diamantino

    2005-01-01

    Phytochemical investigation of the hexane, ethyl acetate and methanolic extracts of roots and leaf stalks of Euterpe precatoria Mart. (acai), afforded stigmast-4-en-6β-ol-3-one (3); p-hydroxy benzoic acid (4); 3β-O-D-glucopyranosyl-sitosterol (5); β-sitosterol palmitate (6); mixtures of β-sitosterol and stigmasterol (1 and 2), α-, β-amyrin and lupeol (7, 8 and 9), friedelin-3-one and 28-hydroxy-friedelin-3-one (10 and 11) and α-, β-D-glucose (12, 13). Except for 1, 2 and 4, the other isolated constituents are described in the genus for the first time. Compounds 3 and 5 gave good results in the brine shrimp bioassay, which detects compounds with potential uses as antitumor agents, pesticides, etc.. (author)

  14. Crinoids of the stalked family Hyocrinidae (Echinodermata) collected by the USNS Eltanin in the Southern Ocean.

    Science.gov (United States)

    Roux, Michel

    2015-07-27

    Rare species only known from one or a few specimens, mainly collected from abyssal and hadal zones in the Southern Ocean are represented in a collection of stalked crinoids attributed to the family Hyocrinidae (Crinoidea, Echinodermata). The species studied here include Belyaevicrinus latipinnulus Mironov & Sorokina, 1998, Feracrinus heinzelleri Bohn, 2012, Ptilocrinus brucei Vaney, 1908 and Thalassocrinus clausus Mironov & Sorokina, 1998. This collection, mainly collected during the 1960s USNS Eltanin cruises, is housed at the Smithsonian Institution National Museum of Natural History in Washington DC. A detailed study of this material using SEM observations of ossicle articular facets and pinnule architecture allows the emendation of species diagnoses, and a better description of intraspecific variation and of changes in characters through ontogeny. Geographical and depth range extension of species are reported. A gonad with submature ovocytes of 100-150 µm was exceptionally preserved at the base of a genital pinnule of P. brucei. This species likely has a lecithotrophic larval development.

  15. Removal of copper and nickel ions from aqueous solutions by grape stalks wastes.

    Science.gov (United States)

    Villaescusa, Isabel; Fiol, Núria; Martínez, María; Miralles, Núria; Poch, Jordi; Serarols, Joan

    2004-02-01

    In the present work, the usefulness of grape stalks wastes generated in the wine production process has been investigated for the removal of copper and nickel ions from aqueous solutions. The sorption process was relatively fast and equilibrium was reached after about 60 min of contact. The influence of pH, sodium chloride and metal concentration on metal removal has been studied. Uptake showed a pH-dependent profile. Maximum sorption for both metals was found to occur at around pH 5.5-6.0. An increase of sodium chloride concentration caused a decrease in metal removal. Langmuir isotherms, at pH 6.0, for each metal were used to describe sorption equilibrium data. Maximum uptake obtained was 1.59x10(-4) mol of copper and 1.81x10(-4) mol of nickel per gram of dry sorbent. Sorption of copper and nickel on grape stalks released an equivalent amount of alkaline and alkaline earth metals (K+, Mg2+, Ca2+) and protons, indicating that ionic exchange is predominantly responsible for metal ion uptake. Fourier transform infrared (FTIR) spectrometry analysis indicated that lignin C-O bond might be involved in metal uptake. Equilibrium batch sorption studies were also performed using a two metal system containing (Cu(II)+Ni(II)). In the evaluation of the two metal sorption system performance, single isotherm curves had to be replaced by three-dimensional sorption isotherm surface. In order to describe the isotherm surface mathematically, the extended-Langmuir model was used. Nickel was found to be much more sensitive to the presence of copper than copper is to the presence of nickel.

  16. Adhesive proteins of stalked and acorn barnacles display homology with low sequence similarities.

    Directory of Open Access Journals (Sweden)

    Jaimie-Leigh Jonker

    Full Text Available Barnacle adhesion underwater is an important phenomenon to understand for the prevention of biofouling and potential biotechnological innovations, yet so far, identifying what makes barnacle glue proteins 'sticky' has proved elusive. Examination of a broad range of species within the barnacles may be instructive to identify conserved adhesive domains. We add to extensive information from the acorn barnacles (order Sessilia by providing the first protein analysis of a stalked barnacle adhesive, Lepas anatifera (order Lepadiformes. It was possible to separate the L. anatifera adhesive into at least 10 protein bands using SDS-PAGE. Intense bands were present at approximately 30, 70, 90 and 110 kilodaltons (kDa. Mass spectrometry for protein identification was followed by de novo sequencing which detected 52 peptides of 7-16 amino acids in length. None of the peptides matched published or unpublished transcriptome sequences, but some amino acid sequence similarity was apparent between L. anatifera and closely-related Dosima fascicularis. Antibodies against two acorn barnacle proteins (ab-cp-52k and ab-cp-68k showed cross-reactivity in the adhesive glands of L. anatifera. We also analysed the similarity of adhesive proteins across several barnacle taxa, including Pollicipes pollicipes (a stalked barnacle in the order Scalpelliformes. Sequence alignment of published expressed sequence tags clearly indicated that P. pollicipes possesses homologues for the 19 kDa and 100 kDa proteins in acorn barnacles. Homology aside, sequence similarity in amino acid and gene sequences tended to decline as taxonomic distance increased, with minimum similarities of 18-26%, depending on the gene. The results indicate that some adhesive proteins (e.g. 100 kDa are more conserved within barnacles than others (20 kDa.

  17. Permeability transition in human mitochondria persists in the absence of peripheral stalk subunits of ATP synthase.

    Science.gov (United States)

    He, Jiuya; Carroll, Joe; Ding, Shujing; Fearnley, Ian M; Walker, John E

    2017-08-22

    The opening of a nonspecific channel, known as the permeability transition pore (PTP), in the inner membranes of mitochondria can be triggered by calcium ions, leading to swelling of the organelle, disruption of the inner membrane and ATP synthesis, and cell death. Pore opening can be inhibited by cyclosporin A mediated via cyclophilin D. It has been proposed that the pore is associated with the dimeric ATP synthase and the oligomycin sensitivity conferral protein (OSCP), a component of the enzyme's peripheral stalk, provides the site at which cyclophilin D interacts. Subunit b contributes a central α-helical structure to the peripheral stalk, extending from near the top of the enzyme's catalytic domain and crossing the membrane domain of the enzyme via two α-helices. We investigated the possible involvement of the subunit b and the OSCP in the PTP by generating clonal cells, HAP1-Δb and HAP1-ΔOSCP, lacking the membrane domain of subunit b or the OSCP, respectively, in which the corresponding genes, ATP5F1 and ATP5O , had been disrupted. Both cell lines preserve the characteristic properties of the PTP; therefore, the membrane domain of subunit b does not contribute to the PTP, and the OSCP does not provide the site of interaction with cyclophilin D. The membrane subunits ATP6, ATP8, and subunit c have been eliminated previously from possible participation in the PTP; thus, the only subunits of ATP synthase that could participate in pore formation are e, f, g, diabetes-associated protein in insulin-sensitive tissues (DAPIT), and the 6.8-kDa proteolipid.

  18. A new stalked filter-feeder from the middle Cambrian Burgess Shale, British Columbia, Canada.

    Directory of Open Access Journals (Sweden)

    Lorna J O'Brien

    Full Text Available Burgess Shale-type deposits provide invaluable insights into the early evolution of body plans and the ecological structure of Cambrian communities, but a number of species, continue to defy phylogenetic interpretations. Here we extend this list to include a new soft-bodied animal, Siphusauctum gregarium n. gen. and n. sp., from the Tulip Beds (Campsite Cliff Shale Member, Burgess Shale Formation of Mount Stephen (Yoho National Park, British Columbia. With 1,133 specimens collected, S. gregarium is clearly the most abundant animal from this locality.This stalked animal (reaching at least 20 cm in length, has a large ovoid calyx connected to a narrow bilayered stem and a small flattened or bulb-like holdfast. The calyx is enclosed by a flexible sheath with six small openings at the base, and a central terminal anus near the top encircled by indistinct openings. A prominent organ, represented by six radially symmetrical segments with comb-like elements, surrounds an internal body cavity with a large stomach, conical median gut and straight intestine. Siphusauctum gregarium was probably an active filter-feeder, with water passing through the calyx openings, capturing food particles with its comb-like elements. It often occurs in large assemblages on single bedding planes suggesting a gregarious lifestyle, with the animal living in high tier clusters. These were probably buried en masse more or less in-situ by rapid mud flow events.Siphusauctum gregarium resembles Dinomischus, another Cambrian enigmatic stalked animal. Principal points of comparison include a long stem with a calyx containing a visceral mass and bract-like elements, and a similar lifestyle albeit occupying different tiering levels. The presence in both animals of a digestive tract with a potential stomach and anus suggest a grade of organization within bilaterians, but relationships with extant phyla are not straightforward. Thus, the broader affinities of S. gregarium remain

  19. Adhesive Proteins of Stalked and Acorn Barnacles Display Homology with Low Sequence Similarities

    Science.gov (United States)

    Jonker, Jaimie-Leigh; Abram, Florence; Pires, Elisabete; Varela Coelho, Ana; Grunwald, Ingo; Power, Anne Marie

    2014-01-01

    Barnacle adhesion underwater is an important phenomenon to understand for the prevention of biofouling and potential biotechnological innovations, yet so far, identifying what makes barnacle glue proteins ‘sticky’ has proved elusive. Examination of a broad range of species within the barnacles may be instructive to identify conserved adhesive domains. We add to extensive information from the acorn barnacles (order Sessilia) by providing the first protein analysis of a stalked barnacle adhesive, Lepas anatifera (order Lepadiformes). It was possible to separate the L. anatifera adhesive into at least 10 protein bands using SDS-PAGE. Intense bands were present at approximately 30, 70, 90 and 110 kilodaltons (kDa). Mass spectrometry for protein identification was followed by de novo sequencing which detected 52 peptides of 7–16 amino acids in length. None of the peptides matched published or unpublished transcriptome sequences, but some amino acid sequence similarity was apparent between L. anatifera and closely-related Dosima fascicularis. Antibodies against two acorn barnacle proteins (ab-cp-52k and ab-cp-68k) showed cross-reactivity in the adhesive glands of L. anatifera. We also analysed the similarity of adhesive proteins across several barnacle taxa, including Pollicipes pollicipes (a stalked barnacle in the order Scalpelliformes). Sequence alignment of published expressed sequence tags clearly indicated that P. pollicipes possesses homologues for the 19 kDa and 100 kDa proteins in acorn barnacles. Homology aside, sequence similarity in amino acid and gene sequences tended to decline as taxonomic distance increased, with minimum similarities of 18–26%, depending on the gene. The results indicate that some adhesive proteins (e.g. 100 kDa) are more conserved within barnacles than others (20 kDa). PMID:25295513

  20. The chaperone ClpX stimulates expression of Staphylococcus aureus protein A by rot dependent and independent pathways

    DEFF Research Database (Denmark)

    Jelsbak, Lotte; Ingmer, Hanne; Valihrach, Lukás

    2010-01-01

    at pinpointing the role of ClpX in Rot synthesis revealed that ClpX is required for translation of Rot. Interestingly, translation of the spa mRNA was, like the rot mRNA, enhanced by ClpX. These data demonstrate that ClpX performs dual roles in regulating Protein A expression, as ClpX stimulates transcription...... of spa by enhancing translation of Rot, and that ClpX additionally is required for full translation of the spa mRNA. The current findings emphasize that ClpX has a central role in fine-tuning virulence regulation in S. aureus....

  1. Enhanced bioprocessing of lignocellulose: Wood-rot fungal saccharification and fermentation of corn fiber to ethanol

    Science.gov (United States)

    Shrestha, Prachand

    This research aims at developing a biorefinery platform to convert corn-ethanol coproduct, corn fiber, into fermentable sugars at a lower temperature with minimal use of chemicals. White-rot (Phanerochaete chrysosporium), brown-rot (Gloeophyllum trabeum) and soft-rot (Trichoderma reesei) fungi were used in this research to biologically break down cellulosic and hemicellulosic components of corn fiber into fermentable sugars. Laboratory-scale simultaneous saccharification and fermentation (SSF) process proceeded by in-situ cellulolytic enzyme induction enhanced overall enzymatic hydrolysis of hemi/cellulose from corn fiber into simple sugars (mono-, di-, tri-saccharides). The yeast fermentation of hydrolyzate yielded 7.1, 8.6 and 4.1 g ethanol per 100 g corn fiber when saccharified with the white-, brown-, and soft-rot fungi, respectively. The highest corn-to-ethanol yield (8.6 g ethanol/100 g corn fiber) was equivalent to 42 % of the theoretical ethanol yield from starch and cellulose in corn fiber. Cellulase, xylanase and amylase activities of these fungi were also investigated over a week long solid-substrate fermentation of corn fiber. G. trabeum had the highest activities for starch (160 mg glucose/mg protein.min) and on day three of solid-substrate fermentation. P. chrysosporium had the highest activity for xylan (119 mg xylose/mg protein.min) on day five and carboxymethyl cellulose (35 mg glucose/mg protein.min) on day three of solid-substrate fermentation. T. reesei showed the highest activity for Sigma cell 20 (54.8 mg glucose/mg protein.min) on day 5 of solid-substrate fermentation. The effect of different pretreatments on SSF of corn fiber by fungal processes was examined. Corn fiber was treated at 30 °C for 2 h with alkali [2% NaOH (w/w)], alkaline peroxide [2% NaOH (w/w) and 1% H2O 2 (w/w)], and by steaming at 100 °C for 2 h. Mild pretreatment resulted in improved ethanol yields for brown- and soft-rot SSF, while white-rot and Spezyme CP SSFs showed

  2. Differences in crystalline cellulose modification due to degradation by brown and white rot fungi.

    Science.gov (United States)

    Hastrup, Anne Christine Steenkjær; Howell, Caitlin; Larsen, Flemming Hofmann; Sathitsuksanoh, Noppadon; Goodell, Barry; Jellison, Jody

    2012-10-01

    Wood-decaying basidiomycetes are some of the most effective bioconverters of lignocellulose in nature, however the way they alter wood crystalline cellulose on a molecular level is still not well understood. To address this, we examined and compared changes in wood undergoing decay by two species of brown rot fungi, Gloeophyllum trabeum and Meruliporia incrassata, and two species of white rot fungi, Irpex lacteus and Pycnoporus sanguineus, using X-ray diffraction (XRD) and (13)C solid-state nuclear magnetic resonance (NMR) spectroscopy. The overall percent crystallinity in wood undergoing decay by M. incrassata, G. trabeum, and I. lacteus appeared to decrease according to the stage of decay, while in wood decayed by P. sanguineus the crystallinity was found to increase during some stages of degradation. This result is suggested to be potentially due to the different decay strategies employed by these fungi. The average spacing between the 200 cellulose crystal planes was significantly decreased in wood degraded by brown rot, whereas changes observed in wood degraded by the two white rot fungi examined varied according to the selectivity for lignin. The conclusions were supported by a quantitative analysis of the structural components in the wood before and during decay confirming the distinct differences observed for brown and white rot fungi. The results from this study were consistent with differences in degradation methods previously reported among fungal species, specifically more non-enzymatic degradation in brown rot versus more enzymatic degradation in white rot. Copyright © 2012 The British Mycological Society. Published by Elsevier Ltd. All rights reserved.

  3. Interactions of Salmonella enterica Serovar Typhimurium and Pectobacterium carotovorum within a Tomato Soft Rot.

    Science.gov (United States)

    George, Andrée S; Cox, Clayton E; Desai, Prerak; Porwolik, Steffen; Chu, Weiping; de Moraes, Marcos H; McClelland, Michael; Brandl, Maria T; Teplitski, Max

    2018-03-01

    Salmonella spp. are remarkably adaptable pathogens, and this adaptability allows these bacteria to thrive in a variety of environments and hosts. The mechanisms with which these pathogens establish within a niche amid the native microbiota remain poorly understood. Here, we aimed to uncover the mechanisms that enable Salmonella enterica serovar Typhimurium strain ATCC 14028 to benefit from the degradation of plant tissue by a soft rot plant pathogen, Pectobacterium carotovorum The hypothesis that in the soft rot, the liberation of starch (not utilized by P. carotovorum ) makes this polymer available to Salmonella spp., thus allowing it to colonize soft rots, was tested first and proven null. To identify the functions involved in Salmonella soft rot colonization, we carried out transposon insertion sequencing coupled with the phenotypic characterization of the mutants. The data indicate that Salmonella spp. experience a metabolic shift in response to the changes in the environment brought on by Pectobacterium spp. and likely coordinated by the csrBC small regulatory RNA. While csrBC and flhD appear to be of importance in the soft rot, the global two-component system encoded by barA sirA (which controls csrBC and flhDC under laboratory conditions) does not appear to be necessary for the observed phenotype. Motility and the synthesis of nucleotides and amino acids play critical roles in the growth of Salmonella spp. in the soft rot. IMPORTANCE Outbreaks of produce-associated illness continue to be a food safety concern. Earlier studies demonstrated that the presence of phytopathogens on produce was a significant risk factor associated with increased Salmonella carriage on fruits and vegetables. Here, we genetically characterize some of the requirements for interactions between Salmonella and phytobacteria that allow Salmonella spp. to establish a niche within an alternate host (tomato). Pathways necessary for nucleotide synthesis, amino acid synthesis, and motility

  4. Resistance mechanisms to toxin-mediated charcoal rot infection in maturity group III soybean: role of seed phenol lignin soflavones sugars and seed minerals in charcoal rot resistance

    Science.gov (United States)

    Charcoal rot is a disease caused by the fungus Macrophomina phaseolina (Tassi) Goid, and thought to infect the plants through roots by a toxin-mediated mechanism, resulting in yield loss and poor seed quality, especially under drought conditions. The mechanism by which this infection occurs is not y...

  5. Microsomal transformation of organophosphorus pesticides by white rot fungi.

    Science.gov (United States)

    Jauregui, Juan; Valderrama, Brenda; Albores, Arnulfo; Vazquez-Duhalt, Rafael

    2003-12-01

    The enzymatic mechanism for the transformation of organophosphorus pesticides (OPPs) by different white-rot fungi strains was studied. With the exception of Ganoderma applanatum 8168, all strains from a collection of 17 different fungi cultures were able to deplete parathion. Three strains showing the highest activities were selected for further studies: Bjerkandera adusta 8258, Pleurotus ostreatus 7989 and Phanerochaete chrysosporium 3641. These strains depleted 50 to 96% of terbufos, azinphos-methyl, phosmet and tribufos after four-days exposure to the pesticides. In order to identify the cellular localization of the transformation activity, the extracellular and microsomal fractions of Pleuronts ostreatus 7989 were evaluated in vitro. While the activities of ligninolytic enzymes (lignin peroxidase, manganese peroxidase and laccase) were detected in the extracellular fraction, no enzymatic modification of any of the five pesticides tested could be found, suggesting the intracellular origin of the transformation activity. In accordance with this observation the microsomal fraction was found able to transform three OPPs with the following rates: 10 micromol mg prot(-1) h(-1) for phosmet, 5.7 micromol mg prot(-1) h(-1) for terbufos, and 2.2 micromol mg prot(-1) h(-1) for azinphos-methyl. The products from these reactions and from the transformation of trichlorfon and malathion, were identified by mass-spectrometry. These results, supported by specific inhibition experiments and the stringent requirement for NADPH during the in vitro assays suggest the involvement of a cytochrome P450.

  6. Solubilization and Mineralization of Lignin by White Rot Fungi

    Science.gov (United States)

    Boyle, C. David; Kropp, Bradley R.; Reid, Ian D.

    1992-01-01

    The white rot fungi Lentinula edodes, Phanerochaete chrysosporium, Pleurotus sajor-caju, Flammulina velutipes, and Schizophyllum commune were grown in liquid media containing 14C-lignin-labelled wood, and the formation of water-soluble 14C-labelled products and 14CO2, the growth of the fungi, and the activities of extracellular lignin peroxidase, manganese peroxidase, and laccase were measured. Conditions that affect the rate of lignin degradation were imposed, and both long-term (0- to 16-day) and short-term (0- to 72-h) effects on the production of the two types of product and on the activities of the enzymes were monitored. The production of 14CO2-labelled products from the aqueous ones was also investigated. The short-term studies showed that the different conditions had different effects on the production of the two products and on the activities of the enzymes. Nitrogen sources inhibited the production of both products by all species when differences in growth could be discounted. Medium pH and manganese affected lignin degradation by the different species differently. With P. chrysosporium, the results were consistent, with lignin peroxidase playing a role in lignin solubilization and manganese peroxidase being important in subsequent CO2 production. PMID:16348781

  7. Biodegradation of pentachlorophenol by the white rot fungus Phanerochaete chrysosporium

    International Nuclear Information System (INIS)

    Mileski, G.J.; Bumpus, J.A.; Jurek, M.A.; Aust, S.D.

    1988-01-01

    Extensive biodegradation of pentachlorophenol (PCP) by the white rot fungus Phanerochaete chrysosporium was demonstrated by the disappearance and mineralization of [ 14 C]PCP in nutrient nitrogen-limited culture. Mass balance analyses demonstrated the formation of water-soluble metabolites of [ 14 C]PCP during degradation. Involvement of the lignin-degrading system of this fungus was suggested by the fact that the time of onset, time course, and eventual decline in the rate of PCP mineralization were similar to those observed for [ 14 C]lignin degradation. Also, a purified ligninase was shown to be able to catalyze the initial oxidation of PCP. Although biodegradation of PCP was decreased in nutrient nitrogen-sufficient (i.e., nonligninolytic) cultures of P. chrysosporium, substantial biodegradation of PCP did occur, suggesting that in addition to the lignin-degrading system, another degradation system may also be responsible for some of the PCP degradation observed. Toxicity studies showed that PCP concentrations above 4 mg/liter (15 μM) prevented growth when fungal cultures were identified by inoculation with spores. The lethal effects of PCP could, however, be the circumvented by allowing the fungus to establish a mycelial mat before adding PCP. With this procedure, the fungus was able to grow and mineralize [ 14 C]PCP at concentrations as high as 500 mg/liter (1.9 mM)

  8. Identification of some saffron corm rot fungi and their control

    Directory of Open Access Journals (Sweden)

    Ayatollah Saeedizadeh

    2014-10-01

    Full Text Available In order to isolation and identification of causal agents of corm rot and their control, the sampling was done from corms in farms of Bushroueye, southern Khorasan province. After culturing of sections of infected corms, the fungi, Penicillium digitatum, Aspergillus niger, and Rhizopus stolonifer were isolated and identified. For their control test, four concentrations of Pseudomonas fluorescens CHAO, Trichoderma harzianum Bi, and four concentrations of fungicides, cupper oxichlorore and benomil,were used with four replications. The control effect of antagonists and fungicides were determined by measurement of diameter of pathogens colony on medium. The results showed that the maximum of control of antagonistic fungus were obtained in concentrations of 1×107 and 1×108, and in the case of antagonistic bacterium wereshown in concentrations of 1×109 and 1×1010. The fungicides had maximum control in concentrations of 3×10-3 and 4×10-3. In general, among of the treatments, T. harzianumwas most effective to reducing the growth of pathogenic fungi.

  9. A novel cost-effective technology to convert sucrose and homocelluloses in sweet sorghum stalks into ethanol

    Science.gov (United States)

    2013-01-01

    Background Sweet sorghum is regarded as a very promising energy crop for ethanol production because it not only supplies grain and sugar, but also offers lignocellulosic resource. Cost-competitive ethanol production requires bioconversion of all carbohydrates in stalks including of both sucrose and lignocellulose hydrolyzed into fermentable sugars. However, it is still a main challenge to reduce ethanol production cost and improve feasibility of industrial application. An integration of the different operations within the whole process is a potential solution. Results An integrated process combined advanced solid-state fermentation technology (ASSF) and alkaline pretreatment was presented in this work. Soluble sugars in sweet sorghum stalks were firstly converted into ethanol by ASSF using crushed stalks directly. Then, the operation combining ethanol distillation and alkaline pretreatment was performed in one distillation-reactor simultaneously. The corresponding investigation indicated that the addition of alkali did not affect the ethanol recovery. The effect of three alkalis, NaOH, KOH and Ca(OH)2 on pretreatment were investigated. The results indicated the delignification of lignocellulose by NaOH and KOH was more significant than that by Ca(OH)2, and the highest removal of xylan was caused by NaOH. Moreover, an optimized alkali loading of 10% (w/w DM) NaOH was determined. Under this favorable pretreatment condition, enzymatic hydrolysis of sweet sorghum bagasse following pretreatment was investigated. 92.0% of glucan and 53.3% of xylan conversion were obtained at enzyme loading of 10 FPU/g glucan. The fermentation of hydrolyzed slurry was performed using an engineered stain, Zymomonas mobilis TSH-01. A mass balance of the overall process was calculated, and 91.9 kg was achieved from one tonne of fresh sweet sorghum stalk. Conclusions A low energy-consumption integrated technology for ethanol production from sweet sorghum stalks was presented in this work

  10. Developmental and Metabolic Plasticity of White-Skinned Grape Berries in Response to Botrytis cinerea during Noble Rot1[OPEN

    Science.gov (United States)

    Collins, Thomas S.; Vicente, Ariel R.; Doyle, Carolyn L.; Ye, Zirou; Allen, Greg; Heymann, Hildegarde

    2015-01-01

    Noble rot results from exceptional infections of ripe grape (Vitis vinifera) berries by Botrytis cinerea. Unlike bunch rot, noble rot promotes favorable changes in grape berries and the accumulation of secondary metabolites that enhance wine grape composition. Noble rot-infected berries of cv Sémillon, a white-skinned variety, were collected over 3 years from a commercial vineyard at the same time that fruit were harvested for botrytized wine production. Using an integrated transcriptomics and metabolomics approach, we demonstrate that noble rot alters the metabolism of cv Sémillon berries by inducing biotic and abiotic stress responses as well as ripening processes. During noble rot, B. cinerea induced the expression of key regulators of ripening-associated pathways, some of which are distinctive to the normal ripening of red-skinned cultivars. Enhancement of phenylpropanoid metabolism, characterized by a restricted flux in white-skinned berries, was a common outcome of noble rot and red-skinned berry ripening. Transcript and metabolite analyses together with enzymatic assays determined that the biosynthesis of anthocyanins is a consistent hallmark of noble rot in cv Sémillon berries. The biosynthesis of terpenes and fatty acid aroma precursors also increased during noble rot. We finally characterized the impact of noble rot in botrytized wines. Altogether, the results of this work demonstrated that noble rot causes a major reprogramming of berry development and metabolism. This desirable interaction between a fruit and a fungus stimulates pathways otherwise inactive in white-skinned berries, leading to a greater accumulation of compounds involved in the unique flavor and aroma of botrytized wines. PMID:26450706

  11. Developmental and Metabolic Plasticity of White-Skinned Grape Berries in Response to Botrytis cinerea during Noble Rot.

    Science.gov (United States)

    Blanco-Ulate, Barbara; Amrine, Katherine C H; Collins, Thomas S; Rivero, Rosa M; Vicente, Ariel R; Morales-Cruz, Abraham; Doyle, Carolyn L; Ye, Zirou; Allen, Greg; Heymann, Hildegarde; Ebeler, Susan E; Cantu, Dario

    2015-12-01

    Noble rot results from exceptional infections of ripe grape (Vitis vinifera) berries by Botrytis cinerea. Unlike bunch rot, noble rot promotes favorable changes in grape berries and the accumulation of secondary metabolites that enhance wine grape composition. Noble rot-infected berries of cv Sémillon, a white-skinned variety, were collected over 3 years from a commercial vineyard at the same time that fruit were harvested for botrytized wine production. Using an integrated transcriptomics and metabolomics approach, we demonstrate that noble rot alters the metabolism of cv Sémillon berries by inducing biotic and abiotic stress responses as well as ripening processes. During noble rot, B. cinerea induced the expression of key regulators of ripening-associated pathways, some of which are distinctive to the normal ripening of red-skinned cultivars. Enhancement of phenylpropanoid metabolism, characterized by a restricted flux in white-skinned berries, was a common outcome of noble rot and red-skinned berry ripening. Transcript and metabolite analyses together with enzymatic assays determined that the biosynthesis of anthocyanins is a consistent hallmark of noble rot in cv Sémillon berries. The biosynthesis of terpenes and fatty acid aroma precursors also increased during noble rot. We finally characterized the impact of noble rot in botrytized wines. Altogether, the results of this work demonstrated that noble rot causes a major reprogramming of berry development and metabolism. This desirable interaction between a fruit and a fungus stimulates pathways otherwise inactive in white-skinned berries, leading to a greater accumulation of compounds involved in the unique flavor and aroma of botrytized wines. © 2015 American Society of Plant Biologists. All Rights Reserved.

  12. Sour rot-damaged grapes are sources of wine spoilage yeasts.

    Science.gov (United States)

    Barata, André; González, Sara; Malfeito-Ferreira, Manuel; Querol, Amparo; Loureiro, Virgílio

    2008-11-01

    Yeast species of sound and sour rot-damaged grapes were analysed during fermentation and grape ripening in the vineyard, using general and selective culture media. During 2003 and 2004 vintages, microvinifications were carried out with sound grapes to which different amounts of grapes with sour rot were added. The wine spoilage species Zygosaccharomyces bailii was only recovered during fermentations with sour rot, reaching 5.00 log CFU mL(-1) (2003) and 2.48 log CFU mL(-1) (2004) at the end of fermentation. The study of yeast populations during the sour rot ripening process (2005 vintage) showed that the veraison-damaged grapes always exhibited higher total yeast counts and a much greater diversity of species. From a total of 22 ascomycetous species, 17 were present only in damaged grapes. The most frequent species were Issatchenkia occidentalis and Zygoascus hellenicus. The spoilage species Z. bailii and Zygosaccharomyces bisporus were consistently isolated exclusively from damaged grapes. This work demonstrates that one of the most dangerous wine spoilage species, Z. bailii, is strongly associated with sour rot grapes and survives during fermentation with Saccharomyces cerevisiae. The use of selective media provides a more accurate characterization of grape contamination species.

  13. Occurrence of Root Rot and Vascular Wilt Diseases in Roselle (Hibiscus sabdariffa L.) in Upper Egypt

    Science.gov (United States)

    Hassan, Naglaa; Shimizu, Masafumi

    2014-01-01

    Roselle (Hibiscus sabdariffa L.) family Malvaceae is an important crop used in food, cosmetics and pharmaceutics industries. Roselle is cultivated mainly in Upper Egypt (Qena and Aswan governorates) producing 94% of total production. Root rot disease of roselle is one of the most important diseases that attack both seedlings and adult plants causing serious losses in crop productivity and quality. The main objective of the present study is to identify and characterize pathogens associated with root rot and wilt symptoms of roselle in Qena, Upper Egypt and evaluate their pathogenicity under greenhouse and field condition. Fusarium oxysporum, Macrophomina phaseolina, Fusarium solani, Fusarium equiseti and Fusarium semitectum were isolated from the natural root rot diseases in roselle. All isolated fungi were morphologically characterized and varied in their pathogenic potentialities. They could attack roselle plants causing damping-off and root rot/wilt diseases in different pathogenicity tests. The highest pathogenicity was caused by F. oxysporum and M. phaseolina followed by F. solani. The least pathogenic fungi were F. equiseti followed by F. semitectum. It obviously noted that Baladi roselle cultivar was more susceptible to infection with all tested fungi than Sobhia 17 under greenhouse and field conditions. This is the first report of fungal pathogens causing root rot and vascular wilt in roselle in Upper Egypt. PMID:24808737

  14. PHOTOSYNTHETIC RESPONSES OF Eucalyptus nitens Maiden AT INITIAL STAGES OF ROOT-ROT INFECTION

    Directory of Open Access Journals (Sweden)

    Luciasih Agustini

    2015-04-01

    Full Text Available Root-rots are known to be latent diseases that may be present in plants for an extended period without any noticeable expression of symptoms above ground. Photosynthetic responses of Eucalyptus nitens saplings artificially inoculated with the root-rot pathogen, Armillaria luteobubalina were examined to characterize the initial stages of root-rot infection. This paper studies three photosynthetic parameters, i.e. photosystem II yield (Fv/Fm, chlorophyll content and photosynthetic capacity (Amax for two strains of A. luteobubalina over a seven-month period. Root systems were either wounded or left intact before inoculation. A significant difference was observed in the Fv/Fm ratio between the uninoculated control and inoculated saplings. Photosystem II yield was considered the most sensitive parameter for the early detection of root-rot disease. Chlorophyll content and Amax decreased for all trees, including controls, during the period of the experiment, and most likely reflected host responses to seasonal change rather than treatment effects. Fungal re-isolations from symptomatic roots of inoculated trees confirmed the presence of A. luteobubalina. Findings from this preliminary trial indicated that there were detectable physiological changes associated with early infection of root-rot. However, to detect more widespread physiological changes an experiment of longer duration is needed.

  15. Phenotypic and genotypic characteristics of Iranian soft rot bacteria isolates from different hosts

    Directory of Open Access Journals (Sweden)

    Rasool REZAEI

    2010-09-01

    Full Text Available During 2005–2006, 42 soft rot bacterial strains were isolated from the infected tubers of potato, roots of carrot, sugar beet and turnip, and the leaves of lettuce and cabbage with soft rot symptoms in Iran. The isolates were rod-shaped, motile with peritrichous flagella, gram negative, facultative anaerobe, oxidase and urease negative and they rotted potato tuber slices. Of the 42 isolates, 20 were identified as Pectobacterium carotovorum subsp. carotovorum (Pcc, 6 as P. carotovorum subsp. odoriferum (Pco, 4 as P. betavasculorum (Pb and 12 strains as Dickeya dadantii (Dda. PCR amplification of fingerprints of repetitive bacterial DNA elements using the REP, ERIC and BOX primers differentiated the soft rot bacteria to the species and subspecieslevel. Strains of Pcc and Dda were phenotypically and genotypically highly variable, but Pb and Pco strains had low variability. REP-PCR was found to be a promising genotypic tool for the rapid and reliable speciation and typing of soft rot bacteria.

  16. Dissecting the hemagglutinin head and stalk-specific IgG antibody response in healthcare workers following pandemic H1N1 vaccination.

    Science.gov (United States)

    Tete, Sarah M; Krammer, Florian; Lartey, Sarah; Bredholt, Geir; Wood, John; Skrede, Steinar; Cox, Rebecca J

    2016-01-01

    Traditionally, neutralising antibodies that are directed to the major surface glycoprotein hemagglutinin (HA) head domain are measured as surrogate correlates of protection against influenza. In addition to neutralization, hemagglutinin-specific antibodies may provide protection by mediating antibody-dependent cellular cytotoxicity (ADCC). During the 2009 pandemic, vaccination induced HA-specific antibodies that were mostly directed to the conserved HA stalk domain. However, the protective role of these antibodies has not been investigated in detail. We quantified the HA head and stalk-specific antibodies, their avidity, ability to neutralise virus and activate natural killer cells in an ADCC assay. We analyzed sera obtained from 14 healthcare workers who had low hemagglutination inhibition (HI) antibody titres at 3 months after pandemic H1N1 vaccination as well as from 22 controls. Vaccination resulted in a HA stalk dominant antibody response in both low responders and controls. Revaccination of low responders, 5 months later, resulted in a boost in antibodies, with HA head-specific antibodies dominating the response. Comparative analysis of head and stalk antibody avidities revealed that stalk-specific antibodies were qualitatively superior. Furthermore, stalk-specific antibodies mediated virus neutralization and had significantly higher ADCC activity than head-specific antibodies. Despite the head and stalk-specific antibodies being lower in low responders, they had comparable antibody avidity, ADCC functionality and neutralising capacity to those of controls who had high HI titres post-vaccination. Thus, our study has demonstrated that HA stalk-specific antibodies may have an important role in protection through neutralization and ADCC in low responders who do not maintain seroprotective HI antibodies.

  17. Production of Cellulose-Hydrogen from Corn Stalk based on Acid-enzyme Two-Stage Pretreatment by Mixed Culture

    Science.gov (United States)

    Xing, Y.; Fan, Y. T.; Hou, H. W.

    2010-03-01

    Production of cellulose-hydrogen from corn stalk based on acid-enzyme two-stage pretreatment by lesser panda manure was carried out in batch tests. The acid-enzyme two-stage pretreatment of corn stalk was found most effective, in which the yields of soluble saccharides (SS) were 470 mg/g-TS. The maximum cumulative H2 yield (165.8 ml H2/g-TS) and H2 production rate (12.8 ml H2/g-TS h-1) were obtained at pH 5.5, 36 °C by treating a substrate of 15 g/L. The hydrogen content in biogas was 57.0% and there was no significant methane gas observed.

  18. Pituitary stalk transection syndrome: Comparison of clinico-radiological features in adults and children with review of literature

    International Nuclear Information System (INIS)

    Kulkarni, Chinmay; Moorthy, Srikanth; Pullara, Sreekumar K; Rajeshkannan, R; Unnikrishnan, Ambika G

    2012-01-01

    Hypo-pituitarism results from impaired production of one or more of anterior pituitary trophic hormones. A rare cause of hypo-pituitarism is pituitary stalk transection syndrome. The MRI features of this condition in children and its association with hormonal deficiencies have been reported earlier. Reports on adults with this disorder are scarce, with only one small case series published in the recent literature. We studied the hormonal deficiency pattern and MRI findings of 12 patients with pituitary stalk transection syndrome who presented to our department between 2004 and 2011. Six patients were children and six were adults (≥18 years). This article compares the adult clinico-radiological phenotype of pituitary transection syndrome with the pediatric group of patients with same condition

  19. The production of glucose from corn stalk using hydrothermal process with pre-treatment ultrasound assisted alkaline

    Science.gov (United States)

    Yolanda, Dora; Prasutiyo, Indry; Trisanti, P. N.; Sumarno

    2015-12-01

    The production of glucose from corn stalk by using subcritical hydrothermal technology is studied in this work. Ultrasound-assisted alkaline delignification methods are used as pre-treatment. The corn stalk powder were pretreated with ultrasound-assisted alkaline (NaOH 2% w/w, solid to liquid ratio 1:22 w/v) at room temperature and 30 minutes. After pre-treatment, solid residue and liquid fractions are separated by filtration. Pretreated solids are further submitted to hydrothermal process for glucose production. Hydrothermal process was carried out at 100 Bar and 120°C in various times. The solid product was characterized by SEM and XRD. And liquid product was analysis using DNS method to determine percentage of glucose. From XRD analysis showed that crystallinity of material was lower than delignification product.

  20. Characterizing forest root‐ and butt‐rot fungi in Yap, Palau, Pohnpei, Kosrae, Guam and Saipan [Chapter III

    Science.gov (United States)

    Phil Cannon; Ned B. Klopfenstein; Mee-Sook Kim; Yuko Ota; Norio Sahashi; Robert L. Schlub; Roger Brown; Sara M. Ashiglar; Amy L. Ross-Davis; John W. Hanna

    2014-01-01

    Ganoderma and Phellinus are two common fungal genera causing butt-rot on trees growing on USA-affiliated islands of the western Pacific. Although these fungi can be quite prevalent, especially in some older mangrove stands, it appears that the majority of infections caused by these fungi leads to severe rotting of the heartwood but do not kill the living...

  1. Degradation of lipophilic wood extractive constituents in Pinus sylvestris by the white-rot fungi Bjerkandera sp. and Trametes versicolor

    NARCIS (Netherlands)

    Dorado, J.; Beek, van T.A.; Claassen, F.W.; Sierra-Alvarez, R.

    2001-01-01

    The white-rot fungi Trametes versicolor and Bjerkandera spp. are among the most frequent decomposers of angiosperm wood in forest ecosystems and in wood products in service. Wood extractives have a major impact on wood properties and wood utilization. This work evaluated the ability of two white-rot

  2. Formation of dry gram-negative bacteria biocontrol products and small pilot tests against potato dry rot

    Science.gov (United States)

    Pseudomonas fluorescens strains S11:P:12, P22:Y:05, and S22:T:04 reduce important potato maladies in storage including dry rot, late blight, pink rot, and sprouting. Experiments were conducted to identify methods for producing a dried, efficacious biological control product from one or more of these...

  3. Detection, identification and differentiation of Pectobacterium and Dickeya species causing potato blackleg and tuber soft rot: a review

    NARCIS (Netherlands)

    Czajkowski, R.L.; Pérombelon, M.C.M.; Jafra, S.; Lojkowska, E.; Potrykus, M.; Wolf, van der J.M.; Sledz, W.

    2015-01-01

    The soft rot Enterobacteriaceae (SRE) Pectobacterium and Dickeya species (formerly classified as pectinolytic Erwinia spp.) cause important diseases on potato and other arable and horticultural crops. They may affect the growing potato plant causing blackleg and are responsible for tuber soft rot in

  4. Multiplex detection and identification of bacterial pathogens causing potato blackleg and soft rot in Europe, using padlock probes

    NARCIS (Netherlands)

    Slawiak, M.; Doorn, van R.; Szemes, M.; Speksnijder, A.G.C.L.; Waleron, M.; Wolf, van der J.M.; Lojkowska, E.; Schoen, C.D.

    2013-01-01

    The objective of this study was to develop a multiplex detection and identification protocol for bacterial soft rot coliforms, namely Pectobacterium wasabiae (Pw), Pectobacterium atrosepticum (Pba) and Dickeya spp., responsible for potato blackleg and tuber soft rot. The procedures were derived from

  5. rDNA-based characterization of a new binucleate Rhizoctonia spp. causing root rot on kale in Brazil

    NARCIS (Netherlands)

    Kuramae, E.E.; Buzeto, A.L.; Nakatani, A.K.; Souza, N.L.

    2007-01-01

    In this paper we present the first report of the occurrence of a binucleate Rhizoctonia spp. causing hypocotyl and root rot in kale in Brazil. Rhizoctonia spp. were isolated from kale (Brassica oleracea var. acephala) with symptoms of hypocotyl and root rot. The isolates, characterized as binucleate

  6. Screening preharvest/postharvest strategies to prevent fruit rot decay.

    Science.gov (United States)

    Vorstermans, B; Creemers, P

    2007-01-01

    In fruit growing preharvest sprayings in the orchard are mainly applied to protect fruit from decaying. Next to multisite fungicides (captan, thiram, tolylfluanid) the most commonly used products recognized for the Belgium market are Bellis (pyraclostrobin & boscalid) and the combination of Topsin M (thiophanate-methyl) and Frugico (diethofencarb). In general the spraying schedule varies depending on weather conditions (infection risk), preharvest interval of available fungicides, fruitgrower and cultivar of pome fruit (apple/pear). Facing the climatological conditions before picking the residue loading on the fruit surface can differ enormously. Also wet (pre)grading is considered to decrease the product residue resulting to fruits which are less protected before entering the cold storage room. In this context a partially replacement of the preharvest treatments by one postharvest application could offer a reliable alternative to the PPP reduction program (Plant Protection Products) in the orchard. A standardized application method by dipping or drenching will cover the fruits homogenically resulting in a rationalized fungicide use compared to the preharvest sprayings in the orchard. For the Belgium market Philabuster (imazalil & pyrimethanil) is registered for postharvest treatments since for this product a proper solution for the waste water of postharvest uses was developed to protect surface waters (Funds technology). Philabuster provides an advanced mould control towards fruit rot pathogens Gloeosporium spp., Botrytis cinerea and Penicillium spp. In this context several trials were set up to evaluate the biological efficacy of Philabuster alone or in combination with preharvest sprayings in the orchard. In concrete different preharvest spraying schedules were applied in the last six weeks before harvest on apple and pear facing parameters as rational fungicide use, antifungal effectiveness and cost price. The purpose was to select the optimal combination in

  7. Molecular diagnosis of Phytophthora cinnamomi associated with root rot in avocado producing areas of Ecuador

    Directory of Open Access Journals (Sweden)

    Diana Elizabeth Toapanta-Gallegos

    2017-05-01

    Full Text Available One of the most damaging diseases in cultivation of avocado (Persea americana Mill. is root rot associated with Phytophthora cinnamomi Rands. This disease causes progressive wilt and even death of the tree. The objective of this study was to identify the presence of P. cinnamomi in two productive areas of avocado in Ecuador using the molecular technique PCR-RFLP. Tree root samples were obtained with root rot symptoms in the production areas, from which 10 isolates were morphologically identified with Phytophthora spp. infection. To distinguish among the various Phytophthora species, a molecular analysis was performed using molecular markers in the ITSregion of the ribosomal DNA (rDNA. The ITSdigestion fragment obtained by PCR with the Ta qI enzyme confirmed the presence of Phytophthora cinnamomi in the isolated samples, and its association with root rot in the sampled production areas.

  8. Survey of root rot diseases of sugar bett in Central Greece

    Directory of Open Access Journals (Sweden)

    Karadimos Dimitros A.

    2006-01-01

    Full Text Available An extensive survey was conducted during the summer and autumn of 2004 in sugar beet fields in the area of Larissa, Thessaly region, with plants showing symptoms of root rot diseases. The aim of the monitoring was to identify the causal agents of root rot diseases. In total, 76 sugar beet fields were surveyed and 5-10 diseased roots were examined from each field. Isolations, carried out on PDA, showed that two main fungal pathogens causing root rot were Rhizoctonia solani and Phytophthora cryptogea. The former was isolated in 46% of the fields and the latter in 38% of the fields. In addition, Rhizopus stolonifer, Fusarium spp., Scerotium rolfsii and Rhizoctonia violacea were isolated in 14%, 7%, 4% and 1% of the fields respectively. In most of the surveyed fields only one pathogen species was isolated and only in a few of them more than one fungal species was identified.

  9. Suppression of crown and root rot of wheat by the rhizobacterium Paenibacillus polymyxa

    Directory of Open Access Journals (Sweden)

    Lamia LOUNACI

    2017-01-01

    Full Text Available A seedling bioassay was developed for screening a wheat root-associated rhizobacterial strain of Paenibacillus polymyxa for ability to suppress crown and root rot pathogens of wheat. The primary aim was to evaluate the ability of P. polymyxa to suppress Fusarium graminearum, F. culmorum, F. verticillioides and Microdochium nivale, the fungal pathogens responsible for Fusarium crown and root rot and head blight of wheat in Algeria. Bioassays conducted under controlled conditions indicated that seed treatments with P. polymyxa strain SGK2 significantly reduced disease symptoms caused by all four fungal pathogens. Plant growth promotion (increased shoot and root dry weights, however, depended on the pathogen tested. Our results indicate that seed treatments with a biocontrol agent could be an additional strategy for management of wheat crown and root rot pathogens.

  10. Evaluation of a hybrid anaerobic biofilm reactor treating winery effluents and using grape stalks as biofilm carrier

    OpenAIRE

    Wahab, Mohamed Ali; Habouzit, Frédéric; Bernet, Nicolas; Jedidi, Naceur; Escudié, Renaud

    2016-01-01

    Wine production processes generate large amount of both winery wastewater and solid wastes. Furthermore, working periods, volumes and pollution loads greatly vary over the year. Therefore, it is recommended to develop a low cost treatment technology for the treatment of winery effluents taking into account the variation of the organic loading rate (OLR). Accordingly, we have investigated the sequential operation of an anaerobic biofilm reactor treating winery effluents and using grape stalks ...

  11. Using the Resistograph®to distinguish different types of wood rot on living silver fir in Molise (Italy

    Directory of Open Access Journals (Sweden)

    Lasserre B

    2010-10-01

    Full Text Available he study was performed in two silver-fir forests (Abies alba Mill. located in Alto Molise, Province of Isernia: Collemeluccio, near Pescolanciano and Abeti Soprani near Capracotta. The aim of this work was to distinguish different types of wood rot on living silver fir individuals by using the Resistograph® (IML-RESI E400, a device that allows to estimate the variation of wood density by measuring the resistance to micro-perforation. The occurrence of different types of wood rot (white rot and brown rot in living trees was pointed out and discriminated by the device. In the detected deteriorated zones, fungal pathogens and decomposers were isolated and identified, causing either white (Phellinus hartigii, Ganoderma adspersum, Heterobasidion abietinum and Armillaria ostoyae or brown rot (Fomitopsis pinicola.

  12. Influence of steaming explosion time on the physic-chemical properties of cellulose from Lespedeza stalks (Lespedeza crytobotrya).

    Science.gov (United States)

    Wang, Kun; Jiang, Jian-Xin; Xu, Feng; Sun, Run-Cang

    2009-11-01

    The synergistic effect of steam explosion pretreatment and sodium hydroxide post-treatment of Lespedeza stalks (Lespedeza crytobotrya) has been investigated in this study. In this case, Lespedeza stalks were firstly exploded at a fixed steam pressure (22.5 kg/m(2)) for 2-10 min. Then the steam-exploded Lespedeza stalks was extracted with 1 M NaOH at 50 degrees C for 3 h with a shrub to water ratio of 1:20 (g/ml), which yielded 57.3%, 53.1%, 55.4%, 52.8%, 53.2%, and 56.4% (% dry weight) cellulose rich fractions, comparing to 68.0% from non-steam-exploded material. The content of glucose in cellulose rich residues increased with increment of the steaming time and reached to 94.10% at the most severity. The similar increasing trend occurred during the dissolution of hemicelluloses. It is evident that at shorter steam explosion time, autohydrolysis mainly occurred on the hemicelluloses and the amorphous area of cellulose. The crystalline region of cellulose was depolymerized under a prolonged incubation time. The characteristics of the cellulose rich fractions in terms of FT-IR and CP/MAS (13)C NMR spectroscopy and thermal analysis were discussed, and the surface structure was also investigated by SEM.

  13. Selected Abiotic and Biotic Environmental Stress Factors Affecting Two Economically Important Sugarcane Stalk Boring Pests in the United States

    Directory of Open Access Journals (Sweden)

    Allan T. Showler

    2016-02-01

    Full Text Available Sugarcane, Saccharum spp., in the United States is attacked by a number of different arthropod pests. The most serious among those pests are two stalk boring moths in the Family Crambidae: the sugarcane borer, Diatraea saccharalis (F., and the Mexican rice borer, Eoreuma loftini (Dyar. The two species are affected by abiotic and biotic environmental stress factors. Water deficit and excessive soil nitrogen alter physical and physiochemical aspects of the sugarcane plant that make the crop increasingly vulnerable to E. loftini. Weed growth can be competitive with sugarcane but it also supports enhanced abundances and diversity of natural enemies that can suppress infestations of D. saccharalis. In an instance where the stalk borer is considered a stress factor, proximity of vulnerable crops to sugarcane can influence levels of E. loftini infestation of sugarcane. The adverse effects of each stress factor, in terms of stalk borer attack, can be reduced by adopting appropriate cultural practices, such as adequate irrigation, judicious use of nitrogen fertilizer, using noncompetitive weed growth, and not planting vulnerable crops near sugarcane fields. Understanding the relationships between stress factors and crop pests can provide valuable insights for plant breeders and tools for incorporation into integrated pest management strategies.

  14. Model of Fabry-Pérot-type electromagnetic modes of a cylindrical nanowire

    DEFF Research Database (Denmark)

    Bordo, Vladimir

    2010-01-01

    The rigorous theory of normal electromagnetic modes of a cylindrical nanowire of finite length is developed. The exact integral equation which determines the solution of Maxwell's equations obeying the boundary conditions at the whole nanowire surface is derived. The nanowire normal (Fabry......-Pérot) modes are defined as non-trivial solutions of the source-free equation. The approach is considered in more detail for elongated nanowires whose length is much larger than their diameter. The resonance condition obtained for a single-mode nanowire resembles the formula for the Fabry-Pérot resonator...

  15. Functional Genomics of Lignocellulose Degradation in the Basidiomycete White Rot Schizophyllum commune

    Energy Technology Data Exchange (ETDEWEB)

    Ohm, Robin A. [Joint Genome Inst., Walnut Creek, CA (United States); Tegelaar, Martin [Utrecht Univ. (Netherlands); Henrissat, Bernard [Univ. of Marseille (France); Brewer, Heather M. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Purvine, Samuel O. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Baker, Scott [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Wosten, Han A. B. [Utrecht Univ. (Netherlands); Grigoriev, Igor V. [Joint Genome Inst., Walnut Creek, CA (United States); Lugones, Luis G. [Utrecht Univ. (Netherlands)

    2013-03-01

    White and brown rot fungi are among the most important wood decayers in nature. Although more than 50 genomes of Basidiomycete white and brown rots have been sequenced by the Joint Genome Institute, there is still a lot to learn about how these fungi degrade the tough polymers present in wood. In particular, very little is known about how these fungi regulate the expression of genes involved in lignocellulose degradation. Here, we used transcriptomics, proteomics, and promoter analysis in an effort to gain insight into the process of lignocellulose degradation.

  16. New record of Phytophthora root and stem rot of Lavandula angustifolia

    Directory of Open Access Journals (Sweden)

    Leszek B. Orlikowski

    2013-12-01

    Full Text Available Phytophthora cinnamomi was isolated from rotted root and stem parts of lavender as well as from soil taken from containers with diseased plants. Additionally Botrytis cinerea, Fusarium spp. and Sclerotinia sclerotiorum were often isolated from diseased tissues. P. cinnamomi colonised leaves and stem parts of 4 lavender species in laboratory trials and caused stem rot of plants in greenhouse experiments. Cardinal temperature for in vitro growth were about 7,5 and 32°C with optimum 25-27,5°C. The species colonised stem tissues at temperature ranged from 10° to 32°C.

  17. Characterisation of Alternaria species-groups associated with core rot of apples in South Africa

    DEFF Research Database (Denmark)

    Serdani, M.; Kang, J.C.; Andersen, Birgitte

    2002-01-01

    Alternaria core rot of red apple cultivars is a serious post-harvest disease in South Africa. Thirty isolates of Alternaria spp. previously isolated from apple, together with reference isolates of A. alternata and A. infectoria, were characterised and grouped according to their sporulation patterns...... the other species-groups, as all isolates had a distinction of 35 base pair insertions and 6 base pair deletions in the ITS regions. The results obtained in the present study showed that the major pathogens associated with core rot disease of Top Red apples in South Africa belong to the A. tenuissima...

  18. Control of Root-rot Diseases of Phaseolus vulgaris Using Gliotoxin

    Directory of Open Access Journals (Sweden)

    Aliaa, R. E.

    2008-01-01

    Full Text Available Effect of the antifungal antibiotic gliotoxin on root-rot diseases caused by Fusarium solani and its influence on population of fungal flora in soil were investigated. Bean seeds were treated with different concentrations of gliotoxin before sowing. The results obtained from the green house application of bioagent indicated that soaking seeds in different concentrations of gliotoxin from 1µg/mL to 15µg/mL (for 60 minutes significantly reduced the percentage of damping off and root rot as compared with control (pathogen only. Also 10µg/mL of gliotoxin was significantly decreased the population of fungal flora as compared with control.

  19. Growth without growth hormone in combined pituitary hormone deficiency caused by pituitary stalk interruption syndrome

    Directory of Open Access Journals (Sweden)

    Sang Soo Lee

    2017-03-01

    Full Text Available Growth hormone (GH is an essential element for normal growth. However, reports of normal growth without GH have been made in patients who have undergone brain surgery for craniopharyngioma. Normal growth without GH can be explained by hyperinsulinemia, hyperprolactinemia, elevated leptin levels, and GH variants; however, its exact mechanism has not been elucidated yet. We diagnosed a female patient aged 13 with combined pituitary hormone deficiency (CPHD caused by pituitary stalk interruption syndrome (PSIS. The patient has experienced recurrent hypoglycemic seizures since birth, but reached the height of 160 cm at the age of 13, showing normal growth. She grew another 8 cm for 3 years after the diagnosis, and she reached her final adult height of 168 cm which was greater than the midparental height, at the age of 16. The patient's blood GH and insulin-like growth factor-I levels were consistently subnormal, although her insulin levels were normal. Her physical examination conducted at the age of 15 showed truncal obesity, dyslipidemia, and osteoporosis, which are metabolic features of GH deficiency (GHD. Herein, we report a case in which a PSIS-induced CPHD patient attained her final height above mid parental height despite a severe GHD.

  20. Employing response surface methodology (RSM) to improve methane production from cotton stalk.

    Science.gov (United States)

    Zhang, Han; Khalid, Habiba; Li, Wanwu; He, Yanfeng; Liu, Guangqing; Chen, Chang

    2018-03-01

    China is the largest cotton producer with the cotton output accounting for 25% of the total world's cotton production. A large quantity of cotton stalk (CS) waste is generated which is burned and causes environmental and ecological problems. This study investigated the anaerobic digestibility of CS by focusing on improving the methane yield by applying central composite design of response surface methodology (RSM). The purpose of this study was to determine the best level of factors to optimize the desired output of methane production from CS. Thus, it was necessary to describe the relationship of many individual variables with one or more response values for the effective utilization of CS. The influences of feed to inoculum (F/I) ratio and organic loading (OL) on methane production were investigated. Results showed that the experimental methane yield (EMY) and volatile solid (VS) removal were calculated to be 70.22 mL/gVS and 14.33% at F/I ratio of 0.79 and organic loading of 25.61 gVS/L, respectively. Characteristics of final effluent showed that the anaerobic system was stable. This research laid a foundation for future application of CS to alleviate the problems of waste pollution and energy output.

  1. Effect of chromium speciation on its sorption mechanism onto grape stalks entrapped into alginate beads

    Directory of Open Access Journals (Sweden)

    Carlos Escudero

    2017-02-01

    Full Text Available Sorption of Cr(III and Cr(VI ions onto 2% grape stalk (GS powder entrapped in a biopolymeric gel matrix of calcium alginate (CA has been investigated and a mechanism for the retention of both, Cr(VI and Cr(III is proposed. Protons were found to be consumed in Cr(VI sorption/reduction and to compete with Cr(III for the sorbent active sites. Isotherm equilibrium was modelled according to Langmuir equation: maximum capacity was found to be 6.4 and 3.6 mg g−1 for Cr(III and Cr(VI, respectively. The important Ca2+ release observed when Cr(III is sorbed indicates that ion exchange is the main mechanism involved at concentrations lower than 200 mg L−1 while other mechanisms such as microprecipitation or coordination might take place for higher initial concentrations. In the case of Cr(VI, the sorption mechanism is based on the reduction to Cr(III promoted by both protons and the functional groups on the GS surface; this reduction-formed Cr(III is retained by the alginate gel matrix and by microprecipitation onto the surface of GS particles. ESR and SEM-EDX were used to identify chromium species sorbed on the solid phase. Results from this study suggest that GS entrapped in CA gel beads is an effective sorbent for both, Cr(III and Cr(VI removal from aqueous solutions.

  2. High-capacity adsorption of dissolved hexavalent chromium using amine-functionalized magnetic corn stalk composites.

    Science.gov (United States)

    Song, Wen; Gao, Baoyu; Zhang, Tengge; Xu, Xing; Huang, Xin; Yu, Huan; Yue, Qinyan

    2015-08-01

    Easily separable amine-functionalized magnetic corn stalk composites (AF-MCS) were employed for effective adsorption and reduction of toxic hexavalent chromium [Cr(VI)] to nontoxic Cr(III). The saturated magnetization of AF-MCS reached 6.2emu/g, and as a result, it could be separated from aqueous solution by a magnetic process for its superparamagnetism. The studies of various factors influencing the sorption behavior indicated that the optimum AF-MCS dosage for Cr(VI) adsorption was 1g/L, and the maximum adsorption capacity was observed at pH 3.0. The chromium adsorption perfectly fitted the Langmuir isotherm model and pseudo second order kinetic model. Furthermore, characterization of AF-MCS was investigated by means of XRD, SEM, TEM, FT-IR, BET, VSM and XPS analysis to discuss the uptake mechanism. Basically, these results demonstrated that AF-MCS prepared in this work has shown its merit in effective removal of Cr(VI) and rapid separation from effluents simultaneously. Copyright © 2015 Elsevier Ltd. All rights reserved.

  3. The state of the fishery, conservation and management of the stalked barnacle Pollicipes pollicipes in Portugal.

    Science.gov (United States)

    Cruz, Teresa; Jacinto, David; Sousa, Alina; Penteado, Nélia; Pereira, Diana; Fernandes, Joana N; Silva, Teresa; Castro, João J

    2015-12-01

    The stalked barnacle Pollicipes pollicipes is the most important intertidal economical resource in Portugal. The assessment of the state of the fishery, conservation and management of P. pollicipes in Portugal was made for the first time in three regions with different regulations regarding this fishery: two marine protected areas ("Reserva Natural das Berlengas", RNB; and "Parque Natural do Sudoeste Alentejano e Costa Vicentina", PNSACV); and the Center coast. Different approaches (independent observations, inquiries, logbooks) and sources of data (past and recent) were used. An overall negative tendency of the state of the fishery and conservation of this resource was observed in all regions, with the exception of the stable tendency detected in PNSACV when using the inquiries approach. A weak management was considered to be in practice at Center and at PNSACV, while an acceptable management was inferred for RNB. We recommend a change into a co-management system that should be tested in pilot regions as RNB and/or PNSACV. Copyright © 2015 Elsevier Ltd. All rights reserved.

  4. No detectable fertility benefit from a single additional mating in wild stalk-eyed flies.

    Directory of Open Access Journals (Sweden)

    Elisabeth Harley

    2010-12-01

    Full Text Available Multiple mating by female insects is widespread, and the explanation(s for repeated mating by females has been the subject of much discussion. Females may profit from mating multiply through direct material benefits that increase their own reproductive output, or indirect genetic benefits that increase offspring fitness. One particular direct benefit that has attracted significant attention is that of fertility assurance, as females often need to mate multiply to achieve high fertility. This hypothesis has never been tested in a wild insect population.Female Malaysian stalk-eyed flies (Teleopsis dalmanni mate repeatedly during their lifetime, and have been shown to be sperm limited under both laboratory and field conditions. Here we ask whether receiving an additional mating alleviates sperm limitation in wild females. In our experiment one group of females received a single additional mating, while a control group received an interrupted, and therefore unsuccessful, mating. Females that received an additional mating did not lay more fertilised eggs in total, nor did they lay proportionately more fertilised eggs. Female fertility declined significantly through time, demonstrating that females were sperm limited. However, receipt of an additional mating did not significantly alter the rate of this decline.Our data suggest that the fertility consequences of a single additional mating were small. We discuss this effect (or lack thereof, and suggest that it is likely to be attributed to small ejaculate size, a high proportion of failed copulations, and the presence of X-linked meiotic drive in this species.

  5. BIOSORPTION OF MN (II IONS FROM AQUEOUS SOLUTION BY JERUSALEM ARTICHOKE (HELIANTHUS TUBEROSUS L. STALKS

    Directory of Open Access Journals (Sweden)

    Tsvetko PROKOPOV

    2017-09-01

    Full Text Available The purpose of this paper is to tested Jerusalem artichoke stalks as a cheap biosorbent for its ability to remove Mn (II ions from aqueous solution. Batch experiments were carried out to evaluate the effects of pH, biosorbent particle size, dosage, initial metal concentration and contact time. The maximum removal efficiency of about 97.0 % was reached at pH 8.0 by using of biosorbent particle size 530-850  m, adsorbent dosage 30 g/L, initial metal concentration 10 mg/L, temperature 20 oC, agitation speed 120 rpm and contact time 90 min. Pseudo-first order and pseudo-second order models were applied to describe the obtained kinetic data. The pseudo-second order model provided the best fit for experimental data with coefficient of determination R2 > 0.99. Freundlich and Langmuir isotherm models were used to describe metal adsorption. Equilibrium data agreed well with Langmuir isotherm with R2 = 0.993.

  6. Biomineralization by a Newly-Isolated Stalk-Forming Fe-oxidizing Bacterium: Towards Interpretation of Putative Fe Microfossils

    Science.gov (United States)

    Krepski, S. T.; Chan, C. S.

    2010-12-01

    Diverse aerobic, lithotrophic Fe-oxidizing bacteria (FeOB) produce distinctive extracellular Fe-rich filaments, which resemble putative Fe microfossils dating from recent to 1.7 Ga (Slack et al., 2007, EPSL: 243). The filament morphology, texture, and composition are promising biosignatures for these FeOB; however, somewhat similar morphologies have been shown to result from chemical precipitates. In order to accurately identify and interpret such biosignatures, morphology must described in detail and be linked to physiological function and growth conditions in extant organisms. Towards this goal, we aimed to isolate a novel, stalk-forming microaerophilic FeOB, since there exist few isolates. We successfully obtained a pure strain (named R-1) from a circumneutral, freshwater Fe seep in Christiana Creek, Newark, DE. This strain produces a twisted stalk, similar to Gallionella and Mariprofundus in morphology and in mineralogy. Our work shows that R-1 is a neutrophilic obligate FeOB, unable to oxidize other organic or inorganic substrates. It is a Beta-Proteobacterium in the Gallionellaceae family but is phylogenetically distinct from previously isolated Gallionella sp. and Sideroxydans sp. The closest cultured relative is S. lithotrophicus (97% similar) and the closest environmental clone is 98% similar. We have begun growing R-1 and the marine stalk-forming FeOB Mariprofundus ferrooxydans in microslide cultures, which allow direct microscope observation without disturbing growth. We are monitoring oxygen concentration gradients and FeOB response to oxygen levels. In order to link morphology to biological function and growth conditions, we will observe stalk formation under various conditions and document various morphological and textural parameter (e.g. branching and orientation) to establish criteria for biogenicity. No organisms are known to make stalks under anaerobic conditions, so if these structures are detected in the rock record, they could be used as

  7. Phytophthora Root and Crown Rot on Apples in Bulgaria

    Directory of Open Access Journals (Sweden)

    Mariana Nakova

    2010-01-01

    Full Text Available Phytophthora is a genus of Oomycota responsible for some of the most serious diseases with great economic impact (Judelson and Blanco, 2005. While 54 species were found in the 20th century (Erwin and Ribeiro, 1996 another 51-54 new species have been identified(Brasier, 2008 since the year 2000. They are spread worldwide and have broad range of host plants – fruit trees, citrus, forest and park species. Phytophthora can cause serious damages in orchards and nurseries of apples, cherries, etc. In Bulgaria they have been found first on young apples and cherries (1998-1999 in Plovdiv region (Nakova, 2003. Surveys have been done for discovering disease symptoms in Plovdiv and Kjustendil regions. Isolates have been obtained from infected plant material (roots and stem bases applying baiting bioassay (green apples, variety Granny Smith and/or PARP 10 selective media. Phytophthora strains were identified based on standard morphology methods – types of colonies on PDA, CMA, V 8, type and size of sporangia, oogonia and antheridia, andoospores. Cardial temperatures for their growth were tested on CMA and PDA.For molecular studies, DNA was extracted from mycelium using the DNA extraction kit.DNA was amplified using universal primers ITS 6 and ITS 4. Amplification products concentrations were estimated by comparison with the standard DNA. Sequencing was done at the Scottish Crop Research Institute (SCRI, Dundee, Scotland. Phytophthora root and crown rot symptoms first appear in early spring. Infected trees show bud break delay, have small chlorotic leaves, and branches die all of a sudden. Later symptoms are found in August-September. Leaves of the infected trees show reddish discoloration and drop down. Both symptoms are connected with lesions (wet, necrotic in appearance at stem bases of the trees.Disease spread was 2-3% in most gardens, only in an apple orchard in Bjaga (Plovdiv region it was up to 8-10%. Morphologically, the isolates acquired from

  8. Rapid stalk elongation in tulip (Tulipa gesneriana L. cv. Apeldoorn) and the combined action of cold-induced invertase and the water-channel protein gammaTIP.

    Science.gov (United States)

    Balk, P A; de Boer, A D

    1999-09-01

    Many bulbous plants need a low-temperature treatment for flowering. Cold, for example, affects the elongation of the stalk, thereby influencing the quality of the cut flower. How the elongation of the stalk is promoted by cold and which physiological and biochemical mechanisms are involved have remained obscure. As invertase has been shown to be involved in the cold-induced elongation of the flower stalks of tulips (Lambrechts et al., 1994, Plant Physiol 104: 515-520), we further characterized this enzyme by cloning the cDNA and analysing its expression in various tissues of the tulip (Tulipa gesneriana L. cv. Apeldoorn) stalk. In addition, the role of sucrose synthase was investigated. Since turgor pressure is an important force driving cell elongation, the role of a water-channel protein (gammaTIP) was studied in relation to these two enzymes. The mRNA level of the invertase found was substantially up-regulated as a result of cold treatment. Analysis of the amino acid sequence of this invertase revealed the presence of a vacuolar targeting signal. Two different forms of sucrose synthase were found, the expression of one of them appeared to be restricted to the vascular tissue while the other form was present in the surrounding tissue. Both sucrose synthases were present in the stalk during the entire period of bulb storage and after planting, but their activities declined during stalk elongation. The expression of the gammaTIP gene was restricted mainly to the vascular tissue and its expression profile was identical to that of invertase. Simultaneous expression of invertase and gammaTIP possibly leads to an increase in osmotic potential and vacuolar water uptake, thus providing a driving force for stretching the stalk cells.

  9. Short-Read Sequencing for Genomic Analysis of the Brown Rot Fungus Fibroporia radiculosa

    Science.gov (United States)

    J. D. Tang; A. D. Perkins; T. S. Sonstegard; S. G. Schroeder; S. C. Burgess; S. V. Diehl

    2012-01-01

    The feasibility of short-read sequencing for genomic analysis was demonstrated for Fibroporia radiculosa, a copper-tolerant fungus that causes brown rot decay of wood. The effect of read quality on genomic assembly was assessed by filtering Illumina GAIIx reads from a single run of a paired-end library (75-nucleotide read length and 300-bp fragment...

  10. Distribution of cranberry fruit-rotting fungi in new jersey and evidence for nonspecific host resistance.

    Science.gov (United States)

    Stiles, C M; Oudemans, P V

    1999-03-01

    ABSTRACT A survey was conducted over a 3-year period to determine the frequencies and distributions of fruit-rotting fungi in New Jersey cranberry beds. In the first 2 years of the study, Physalospora vaccinii and Glomerella cingulata were the most prevalent and widespread field-rotting fungi. In the third year, the frequency of G. cingulata declined markedly. Other species such as Coleophoma empetri, Phyllosticta vaccinii, and Phomopsis vaccinii were isolated at high frequencies from a limited number of locations. Storage-rotting fungi including Allantophomopsis cytisporea and A. lycopodina were isolated at low frequencies, but were widely distributed within the growing region. On sound fruit, a somewhat different profile emerged. Fungi such as Phyllosticta elongata, Alternaria spp., and Physalospora vaccinii were commonly isolated. In comparisons among different cranberry cultivars, no differences in the fungal profiles were seen. This was interpreted to indicate that if differences in fruit-rot resistance exist, they are likely to be general forms of resistance rather than fungal species-specific mechanisms.

  11. Modification of wheat straw lignin by solid state fermentation with white-rot fungi

    NARCIS (Netherlands)

    Dinis, M.J.; Bezerra, R.M.F.; Nunes, F.; Dias, A.A.; Guedes, C.; Ferreira, L.M.M.; Cone, J.W.; Marques, G.S.M.; Barros, A.R.N.; Rodrigues, M.A.M.

    2009-01-01

    The potential of crude enzyme extracts, obtained from solid state cultivation of four white-rot fungi (Trametes versicolor, Bjerkandera adusta, Ganoderma applanatum and Phlebia rufa), was exploited to modify wheat straw cell wall. At different fermentation times, manganese-dependent peroxidase

  12. A single dominant Ganoderma species is responsible for root rot of ...

    African Journals Online (AJOL)

    Ganoderma root rot is the most serious disease affecting commercially planted Acacia mangium in plantations in Indonesia. Numerous Ganoderma spp. have been recorded from diseased trees of this species and to a lesser extent Eucalyptus, causing confusion regarding the primary cause of the disease. In this study, a ...

  13. Differential stress-induced regulation of two quinone reductases in the brown rot Basidiomycete Gloeophyllum trabeum

    Science.gov (United States)

    Roni Cohen; Melissa R. Suzuki; Kenneth E. Hammel

    2004-01-01

    Quinone reductases (QRDs) have two important functions in the basidiomycete Gloeophyllum trabeum, which causes brown rot of wood. First, a QRD is required to generate biodegradative hydroxyl radicals via redox cycling between two G. trabeum extracellular metabolites, 2,5-dimethoxyhydroquinone (2,5-DMHQ) and 2,5-dimethoxy-1,4-benzoquinone (2,5- DMBQ). Second, because 2,...

  14. Processive endoglucanase active in crystalline cellulose hydrolysis by the brown rot Basidiomycete Gloeophyllum trabeum

    Science.gov (United States)

    Roni Cohen; Melissa R. Suzuki; Kenneth E. Hammel

    2005-01-01

    Brown rot basidiomycetes have long been thought to lack the processive cellulases that release soluble sugars from crystalline cellulose. On the other hand, these fungi remove all of the cellulose, both crystalline and amorphous, from wood when they degrade it. To resolve this discrepancy, we grew Gloeophyllum trabeum on microcrystalline cellulose (Avicel) and purified...

  15. Decolorization of textile dyes and their effluents using white rot fungi ...

    African Journals Online (AJOL)

    Reactive dyes are important chemical pollutants from textile industries .The two species of white rot fungi were evaluated for their ability to decolorize Blue CA, Black B133, Corazol Violet SR. Trametes hirsuta and Pleurotus florida displayed the greatest extent of decolorization. Laccase is the ligneolytic enzyme from these ...

  16. First report of Gliocephalotrichum bulbilium and G. simplex causing fruit rot of rambutan in Puerto Rico

    Science.gov (United States)

    Worldwide, significant post-harvest disease losses of rambutan (Nephelium lappaceum L.) have been reported and several pathogens have been associated with fruit rot. Even though rambutan was introduced to Puerto Rico in 1927, it was not until 1998 that commercial farms were established in the wester...

  17. Chemical compositions, infrared spectroscopy, and X-ray diffractometry study on brown-rotted woods

    Science.gov (United States)

    Gai-Yun Li; Luo-Hua Huang; Chung Hse; Te-Fu Qin

    2011-01-01

    The effect of brown-rot decay on the chemical composition and crystallinity of Masson pine was studied by exposing it to Wolfiporia cocos (Schwein.) Ryvarden and Gilbn. for durations of up to 15 weeks in the field. The holocellulose content, α-cellulose content, and wood crystallinity decreased slowly in the initial stage, followed by a significant reduction...

  18. The role of chemical transport in the brown-rot decay resistance of modified wood

    Science.gov (United States)

    Samuel Zelinka; R. Ringman; A. Pilgard; E. E. Thybring; Joseph Jakes; K. Richter

    2016-01-01

    Chemical modification of wood increases decay resistance but the exact mechanisms remain poorly understood. Recently, Ringman and coauthors examined established theories addressing why modified wood has increased decay resistance and concluded that the most probable cause of inhibition and/or delay of initiation of brown-rot decay is lowering the equilibrium moisture...

  19. Significant levels of extracellular reactive oxygen species produced by brown rot basidiomycetes on cellulose

    Science.gov (United States)

    Roni Cohen; Kenneth A. Jensen; Carl J. Houtman; Kenneth E. Hammel

    2002-01-01

    It is often proposed that brown rot basidiomycetes use extracellular reactive oxygen species (ROS) to accomplish the initial depolymerization of cellulose in wood, but little evidence has been presented to show that the fungi produce these oxidants in physiologically relevant quantities. We used [14C]phenethyl polyacrylate as a radical trap to estimate extracellular...

  20. Dry Rot of Raphia hookeri and its Effect on Proximate Composition ...

    African Journals Online (AJOL)

    Prof. Ogunji

    for planting. Proximate analyses of the healthy and infected mesocarps of the fruit was carried out using the methods described by the Association of Official Analytical ... composition of R. hookeri fruits, there is therefore the need to study the effect of the dry rot disease ..... Trace heavy metal contents of some spices and.

  1. Distribution of Rhizoctonia Bare Patch and Root Rot in Eastern Washington and Relation to Climatic Variables

    Science.gov (United States)

    Rhizoctonia is a fungus that attacks the roots of wheat and barley, causing a root rot and bare patch in the dryland wheat cropping area of the inland Pacific Northwest. Over the last 7 years, we have been investigating the distribution of this pathogen, using molecular methods based on extracting a...

  2. Mechanism of antibacterial activity of the white-rot fungus Hypholoma fasciculare colonizing wood

    NARCIS (Netherlands)

    De Boer, W.; Folman, L.B.; Klein Gunnewiek, P.J.A.; Svensson, T.; Bastviken, D.; Oberg, G.; Del Rio, J.C.; Boddy, L.

    2010-01-01

    In a previous study it was shown that the number of wood-inhabiting bacteria was drastically reduced after colonization of beech (Fagus sylvatica) wood blocks by the white-rot fungus Hypholoma fasciculare, or sulfur tuft (Folman et al. 2008). Here we report on the mechanisms of this fungal-induced

  3. Serpula lacrymans, the dry rot fungus and tolerance towards copper-based wood preservatives

    Science.gov (United States)

    Anne Christine Steenkjaer Hastrup; Frederick Green; Carol Clausen; Bo Jensen

    2005-01-01

    Serpula lacrymans (Wulfen : Fries) Schröter, the dry rot fungus, is considered the most economically important wood decay fungus in temperate regions of the world i.e. northern Europe, Japan and Australia. Previously copper based wood preservatives were the most commonly used preservatives for pressure treatment of wood for building constructions. Because of a...

  4. Root rot peas in the Netherlands : fungal pathogens, inoculum potential and soil receptivity

    NARCIS (Netherlands)

    Oyarzun, P.J.

    1994-01-01

    Fungi associated to pea (Pisum sativum L.) root rot were studied. Fusarium and Oomycetes were most common. Fusarium solani f. sp. pisi, Fsp, was widely distributed and the most frequent

  5. Post Harvest Control of Tomato Fruit Rot Caused by Fusarium solani ...

    African Journals Online (AJOL)

    Fusarium Solani is an important rot-causing organism of tomato fruit in storage. Alcohol and water extracts of bark, rootand leaves of the neem plant (Azadirachta indica) were tested against the pathogen both in vitro and in vivo. The alcoholextract of different parts, especially the bark of the plant, gave the highest growth ...

  6. First report of anthracnose fruit rot of blueberry caused by Colletotrichum fioriniae in New Jersey

    Science.gov (United States)

    Anthracnose fruit rot is the most important disease of blueberry in New Jersey. Most fungicide applications in New Jersey and other blueberry growing regions is for the control of this disease. The causal agent of this disease has been reported to be Colletotrichum acutatum and other species in the ...

  7. HORMONAL ACTIVITIES OF NOVEL BROMINATED FLAME RETARDANTS AND THEIR BIODEGRADATION BY WHITE ROT FUNGI

    Czech Academy of Sciences Publication Activity Database

    Ezechiáš, Martin; Svobodová, Kateřina; Cajthaml, Tomáš

    2012-01-01

    Roč. 11, č. 3 (2012), s. 233-233 ISSN 1843-3707. [Environmental Microbiology and Biotechnology. 10.04.2012-12.04.2012, Bologna] R&D Projects: GA TA ČR TA01020804 Institutional research plan: CEZ:AV0Z50200510 Keywords : white rot fungi Subject RIV: EE - Microbiology, Virology

  8. Draft genome sequence of a monokaryotic model brown-rot fungus Postia (Rhodonia) placenta SB12

    Science.gov (United States)

    Jill Gaskell; Phil Kersten; Luis F. Larrondo; Paulo Canessa; Diego Martinez; David Hibbett; Monika Schmoll; Christian P. Kubicek; Angel T. Martinez; Jagjit Yadav; Emma Master; Jon Karl Magnuson; Debbie Yaver; Randy Berka; Kathleen Lail; Cindy Chen; Kurt LaButti; Matt Nolan; Anna Lipzen; Andrea Aerts; Robert Riley; Kerrie Barry; Bernard Henrissat; Robert Blanchette; Igor V. Grigoriev; Dan Cullen

    2017-01-01

    We report the genome of Postia (Rhodonia) placenta MAD-SB12, a homokaryotic wood decay fungus (Basidiomycota, Polyporales). Intensively studied as a representative brown rot decayer, the gene complement is consistent with the rapid depolymerization of cellulose but not lignin.

  9. Biological pretreatment of corn stover with white-rot fungus for improved enzymatic hydrolysis

    Science.gov (United States)

    Biological pretreatment of lignocellulosic biomass by white-rot fungus can represent a low-cost and eco-friendly alternative to harsh physical, chemical or physico-chemical pretreatment methods to facilitate enzymatic hydrolysis. However, fungal pretreatment can cause carbohydrate loss and it is, th...

  10. Control of yam tuber rot with leaf extracts of Xylopia aethiopica and ...

    African Journals Online (AJOL)

    JOHN

    orthiophenylphenate, borax, captan, thiobendazole, benomyl, bleach (sodium hypochlorite) have been found to significantly reduce storage rot in yam (Booth, 1974;. Noon, 1978,). Other control methods involve the use of microorganism such as Trichoderma viride and Bacillus subtilis (Okigbo and Ikediugwu, 2000; Okigbo, ...

  11. Biodiversity of Fusarium species causing ear rot of maize in Germany

    NARCIS (Netherlands)

    Görtz, A.; Oerke, E.C.; Steiner, U.; Waalwijk, C.; Vries, de P.M.; Dehne, H.W.

    2008-01-01

    In Germany, maize is one of the most important agriculture commodities, a major component in animal feed as well as an essential substrate producing biogas. Maize car rot poses a major impact worldwide as it is caused by several Fusarium spp., most of which have the ability to produce mycotoxins.

  12. Localizing gene regulation reveals a staggered wood decay mechanism for the brown rot fungus Postia placenta

    Science.gov (United States)

    Jiwei Zhang; Gerald N. Presley; Kenneth E. Hammel; Jae-San Ryu; Jon R. Menke; Melania Figueroa; Dehong Hu; Galya Orr; Jonathan S. Schilling

    2016-01-01

    Wood-degrading brown rot fungi are essential recyclers of plant biomass in forest ecosystems. Their efficient cellulolytic systems, which have potential biotechnological applications, apparently depend on a combination of two mechanisms: lignocellulose oxidation (LOX) by reactive oxygen species (ROS) and polysaccharide hydrolysis by a limited set of glycoside...

  13. Lignin degrading system of white-rot fungi and its exploitation for dye decolorization

    Czech Academy of Sciences Publication Activity Database

    Shah, V.; Nerud, František

    2002-01-01

    Roč. 48, - (2002), s. 857-870 ISSN 0008-4166 R&D Projects: GA ČR GA526/01/0915 Institutional research plan: CEZ:AV0Z5020903 Keywords : lignin degradation * white-rot fungi * laccase Subject RIV: EE - Microbiology, Virology Impact factor: 1.080, year: 2002

  14. Irpex lacteus, a white-rot fungus with biotechnological potential — review

    Czech Academy of Sciences Publication Activity Database

    Novotný, Čeněk; Cajthaml, Tomáš; Svobodová, Kateřina; Šušla, Martin; Šašek, Václav

    2009-01-01

    Roč. 5, č. 5 (2009), s. 375-390 ISSN 0015-5632 R&D Projects: GA AV ČR IAAX00200901 Institutional research plan: CEZ:AV0Z50200510 Keywords : White-rot fungi * degradation * irpex lacteus Subject RIV: EE - Microbiology, Virology Impact factor: 0.978, year: 2009

  15. Effect of Charcoal Rot on Selected Putative Drought Resistant Soybean Genotypes and Yield.

    Science.gov (United States)

    Charcoal rot (CR), caused by the fungus Macrophomina phaseolina (Tassi) Goid. is a pervasive disease of economic significance on soybeans ([(Glycine max (L.) Merr.) that is exacerbated when plants are under stress, especially under heat and drought condition. Thus, the objective of this research was...

  16. Potato brown rot incidence and severity under different management and amendment regimes in different soil types

    NARCIS (Netherlands)

    Messiha, N.A.S.; Bruggen, van A.H.C.; Diepeningen, van A.D.; Vos, de O.J.; Termorshuizen, A.J.; Tjou-Tam-Sin, N.N.A.; Janse, J.D.

    2007-01-01

    Ralstonia solanacearum race 3 biovar 2, the causative agent of potato brown rot (bacterial wilt), is an economically important disease in tropical, subtropical and temperate regions of the world. In view of previous reports on suppression of the disease by organic amendments, and the expansion of

  17. Armillaria root rot in the Canadian prairie provinces. Information report No. -X-329

    Energy Technology Data Exchange (ETDEWEB)

    Mallet, K.I.

    1992-01-01

    Armillaria root rot is one of the most important diseases of forest trees in the prairie provinces of Canada. Information on symptoms, detection, and damage caused by the disease is given. The Armillaria species in the prairie provinces, their geographic distribution and host range is discussed. Means of spread and control of the disease are described.

  18. Armillaria root rot of tea in Kenya : characterization of the pathogen and approaches to disease management

    NARCIS (Netherlands)

    Otieno, W.

    2002-01-01

    The rare occurrence of basidiomata and rhizomorphs constrains diagnosis of Armillaria root rot and identification of Armillaria species in Africa. This has had a negative impact on taxonomic research on the genus Armillaria in the continent, where the

  19. FOOT ROT DISEASE IDENTIFICATION FOR VELLAIKODI VARIETY OF BETELVINE PLANTS USING DIGITAL IMAGE PROCESSING

    Directory of Open Access Journals (Sweden)

    J. Vijayakumar

    2012-11-01

    Full Text Available Betelvine plants are infected variety of diseases in the complete plantation without any premature warning of the diseases. The aim of this paper is to detection of foot rot disease in the vellaikodi variety of betelvine plants using digital image processing techniques. The digital images of the uninfected or normal betelvine leaves and the digital images of the infected in foot rot diseased betelvine leaves at different stages are collected from different Betelvine plants using a high resolution digital camera and collected betelvine images are stored with JPEG format. The digital images of the betelvine leaves analyses are done using the image processing toolbox in MATLAB which gives the normal patterns of the digital images. Using RGB encoding process, the RGB components of the betelvine leaves are separated. The mean and median values for all sample leaves are computed and calculated values are stored in the system. The mean and median values of test leaves are computed and compared with the stored values. As the result of this comparison, it is identified whether test leaves are affected by foot rot disease or not. Finally this analysis helps to recognize the foot rot disease can be identified before it spreads to entire crop.

  20. Improving ruminal degradability of oil palm fronds using white rot fungi

    NARCIS (Netherlands)

    Rahman, M.M.; Lourenco, M.; Hassim, H.A.; Baars, J.J.P.; Sonnenberg, A.S.M.; Cone, J.W.; Boever, de J.L.; Fievez, V.

    2011-01-01

    The use of oil palm fronds (OPF) in livestock production is limited as up to 0.20 of their dry biomass is lignin. White rot fungi (WRF) are very effective basidiomycetes for biological pre-treatment as they degrade lignin extensively. Ten WRF were screened for their potential to increase OPF

  1. Bioremoval of humic acid from water by white rot fungi: exploring the removal mechanisms

    NARCIS (Netherlands)

    Zahmatkesh, M.; Spanjers, H.L.F.M.; Toran, M. J.; Blánquez, P.; van Lier, J.B.

    2016-01-01

    © 2016, The Author(s).Twelve white rot fungi (WRF) strains were screened on agar plates for their ability to bleach humic acid (HA). Four fungal strains were selected and tested in liquid media for removal of HA. Bioremediation was investigated by HA color removal and changes in the concentration

  2. Phytophthora megakarya, a causal agent of black pod rot in Africa

    Science.gov (United States)

    In most parts of the world where Theobroma cacao is grown, Phytophthora palmivora is the major concern for causing black pod rot (BPR). Phytophthora megakarya, on the other hand, occurs only in Africa, but represents a major threat to cacao production, the countries of West Africa being the largest ...

  3. Host resistance to Botrytis bunch rot in Vitis spp. and its correlation with Botrytis leaf spot

    Science.gov (United States)

    Botrytis cinerea, the causal agent of Botrytis bunch rot, is the number one postharvest disease of fresh grapes in the U.S. Fungicide applications are used to manage the disease, but resistant isolates are common and postharvest losses occur annually. Host resistance is needed for long-term manageme...

  4. Genome Sequence of the Banana Pathogen Dickeya zeae Strain MS1, Which Causes Bacterial Soft Rot.

    Science.gov (United States)

    Zhang, Jing-Xin; Lin, Bi-Run; Shen, Hui-Fang; Pu, Xiao-Ming

    2013-06-13

    We report a draft genome sequence of Dickeya zeae strain MS1, which is the causative agent of banana soft rot in China, and we show several of its specific properties compared with those of other D. zeae strains. Genome sequencing provides a tool for understanding the genomic determination of the pathogenicity and phylogeny placement of this pathogen.

  5. Genome Sequence of the Banana Pathogen Dickeya zeae Strain MS1, Which Causes Bacterial Soft Rot

    OpenAIRE

    Zhang, Jing-Xin; Lin, Bi-Run; Shen, Hui-Fang; Pu, Xiao-Ming

    2013-01-01

    We report a draft genome sequence of Dickeya zeae strain MS1, which is the causative agent of banana soft rot in China, and we show several of its specific properties compared with those of other D.?zeae strains. Genome sequencing provides a tool for understanding the genomic determination of the pathogenicity and phylogeny placement of this pathogen.

  6. Creating prescription maps from satellite imagery for site-specific management of cotton root rot

    Science.gov (United States)

    Cotton root rot is a century-old cotton disease that can now be controlled with Topguard Terra Fungicide. However, as this disease tends to occur in the same general areas within fields year after year, site-specific treatment can be more effective and economical. The objective of this study was to ...

  7. Plectosphaerella species associated with root and collar rots of horticultural crops in southern Italy

    NARCIS (Netherlands)

    Carlucci, A.; Raimondo, M.L.; Santos, J.; Phillips, A.J.L.

    2012-01-01

    Plectosphaerella cucumerina, most frequently encountered in its Plectosporium state, is well known as a pathogen of several plant species causing fruit, root and collar rot, and collapse. It is considered to pose a serious threat to melon (Cucumis melo) production in Italy. In the present study, an

  8. Evaluation of rhizobacterial indicators of tobacco black root rot suppressiveness in farmers' fields

    Czech Academy of Sciences Publication Activity Database

    Kyselková, Martina; Almario, J.; Kopecký, J.; Ságová-Marečková, M.; Haurat, J.; Muller, D.; Grundmann, G.L.; Moënne-Loccoz, Y.

    2014-01-01

    Roč. 6, č. 4 (2014), s. 346-353 ISSN 1758-2229 Institutional support: RVO:60077344 Keywords : rhizobacterial indicators * tobacco black root rot suppressiveness * farmers' fields Subject RIV: EH - Ecology, Behaviour Impact factor: 3.293, year: 2014

  9. Phylogenetic, morphological and pathogenic characterization of Alternaria species associated with fruit rots of blueberry in California

    Science.gov (United States)

    Fruit rot caused by Alternaria spp. is one of the most important factors affecting the postharvest quality and shelf life of blueberry fruits. Alternaria spp. isolates were collected from decayed fruits of blueberry in the Central Valley of California during 2012 and 2013. The aims of this study wer...

  10. Evaluation of watermelon varieties for tolerance to powdery mildew and Phytophthora fruit rot, 2014

    Science.gov (United States)

    This experiment was conducted at the U.S. Vegetable Laboratory farm in Charleston, SC. The soil was Yonges loamy fine sand. This study was undertaken to determine the performance of seeded and seedless commercial watermelon varieties for tolerance to powdery mildew (PM) and Phytophthora fruit rot as...

  11. Mechanisms of qualitative and quantitative resistance to Aphanomyces root rot in alfalfa

    Science.gov (United States)

    Aphanomyces root rot (ARR), caused by Aphanomyces euteiches, is one of the most important diseases of alfalfa (Medicago sativa) in the United States. Two races of the pathogen are currently recognized. Most modern alfalfa cultivars have high levels of resistance to race 1 but few cultivars have resi...

  12. First report of truncatella angustata causing postharvest rot on ‘topaz’ apples in the Netherlands

    NARCIS (Netherlands)

    Wenneker, M.; Pham, K.T.K.; Boekhoudt, L.C.; Boer, de F.A.; Leeuwen, van P.J.; Hollinger, T.C.; Thomma, B.P.H.J.

    2017-01-01

    In the Netherlands, about 30% of the organic apple (Malus domestica Borkh.) production consists of apple scab resistant cultivars, such as Topaz and Santana. However, organic ‘Topaz’ apples show a high incidence of fungal rot after storage. Hot-water treatment (HWT) of freshly harvested apple

  13. Genome-wide association analysis of ear rot resistance caused by Fusarium verticillioides in maize.

    Science.gov (United States)

    de Jong, Guilherme; Pamplona, Andrezza Kellen Alves; Von Pinho, Renzo Garcia; Balestre, Marcio

    2017-12-06

    The identification of causal regions associated with resistance to Fusarium verticillioides can be useful to understand resistance mechanisms and further be used in breeding programs. In this study, a genome-wide association study (GWAS) was conducted to identify candidate markers associated with resistance to the ear rot caused by the fungus F. verticillioides. A total of 242 maize inbred lines were genotyped with 23,153 DArT-seq markers. A total of 12 DArTs were associated with ear rot resistance. Some DArTs were localized close to genes with functions directly related to ear rot resistance, such as a gene responsible for the innate immune response that belongs to the class of NBS-LRR receptors. Some markers were also found to be closely associated with genes that synthesize transcription factors (nactf11 and nactf61), genes responsible for the oxidation-reduction process and peroxidase activity. These results are encouraging since some candidate markers can present functional relationship with ear rot resistance in maize. Copyright © 2017 Elsevier Inc. All rights reserved.

  14. Biodegradation of pentachlorophenol by the white rot fungus Phanerochaete chrysosporium (1988)

    Science.gov (United States)

    Extensive biodegradation of pentachlorophenol (PCP) by the white rot fungus Phanerochaete chrysosporium was demonstrated by the disappearance and mineralization of [14C]PCP in nutrient nitrogen-limited culture. Mass balance analyses demonstrated the formation of water-soluble met...

  15. Draft genome sequence of the white-rot fungus Obba rivulosa 3A-2

    Science.gov (United States)

    Otto Miettinen; Robert Riley; Kerrie Barry; Daniel Cullen; Ronald P. de Vries; Matthieu Hainaut; Annele Hatakka; Bernard Henrissat; Kristiina Hilden; Rita Kuo; Kurt LaButti; Anna Lipzen; Miia R. Makela; Laura Sandor; Joseph W. Spatafora; Igor V. Grigoriev; David S. Hibbett

    2016-01-01

    We report here the first genome sequence of the white-rot fungus Obba rivulsa (Polyporales, Basidiomycota), a polypore known for its lignin-decomposing ability. The genome is based on the homokaryon 3A-2 originating in Finland. The genome is typical in size and carbohydrate active enzyme (CAZy) content for wood-decomposing basidiomycetes.

  16. Identification of markers associated with race-specific resistance to Aphanomyces root rot in alfalfa

    Science.gov (United States)

    Aphanomyces root rot, caused by Aphanomyces euteiches, is one of the most important diseases of alfalfa in the United States. Two races of the pathogen are recognized and although most cultivars are resistant to race 1, fewer have resistance to race 2, the predominant race in North America. Molecula...

  17. A Highly Diastereoselective Oxidant Contributes to Ligninolysis by the White Rot Basidiomycete Ceriporiopsis subvermispora

    Science.gov (United States)

    Daniel J. Yelle; Alexander N. Kapich; Carl J. Houtman; Fachuang Lu; Vitaliy I. Timokhin; Raymond C. Fort Jr.; John Ralph; Kenneth E. Hammel

    2014-01-01

    The white rot basidiomycete Ceriporiopsis subvermispora delignifies wood selectively and has potential biotechnological applications. Its ability to remove lignin before the substrate porosity has increased enough to admit enzymes suggests that small diffusible oxidants contribute to delignification. A key question is whether these unidentified...

  18. Biobleaching of oxygen delignified kraft pulp by several white rot fungal strains.

    NARCIS (Netherlands)

    Moreira, M.T.; Feijoo, G.; Sierra-Alvarez, R.; Lema, J.; Field, J.A.

    1997-01-01

    Twenty-five white rot fungal strains were tested for their ability to bleach Eucalyptus globulus oxygen delignified kraft pulp (OKP). Under nitrogen-limited culture conditions, eight outstanding biobleaching strains were identified that increased the brightness of OKP by more than 10 ISO units

  19. Rhizoctonia crown and root rot resistance evaluation of Beta PIs in Fort Collins, CO, 2014

    Science.gov (United States)

    Thirty-six sugar beet (Beta vulgaris subsp. vulgaris) germplasm from the USDA-Agricultural Research Service pre-breeding program at Fort Collins, Colorado were screened for resistance to Rhizoctonia crown and root rot (RCRR) at the Colorado State University ARDEC facility in Fort Collins, CO. There...

  20. Control of potato soft rot caused by Pectobacterium carotovorum and Pectobacterium atrosepticum by Moroccan actinobacteria isolates.

    Science.gov (United States)

    Baz, M; Lahbabi, D; Samri, S; Val, F; Hamelin, G; Madore, I; Bouarab, K; Beaulieu, C; Ennaji, M M; Barakate, Mustapha

    2012-01-01

    Pectobacterium carotovorum and Pectobacterium atrosepticum are dreadful causal agents of potato soft rot. Actually, there are no efficient bactericides used to protect potato against Pectobacterium spp. Biological control using actinobacteria could be an interesting approach to manage this disease. Thus, two hundred actinobacteria isolated from Moroccan habitats were tested for their ability to inhibit in vitro 4 environmental Pectobacterium strains and the two reference strains (P. carotovorum CFBP 5890 and P. atrosepticum CFBP 5889). Eight percent of these isolates were active against at least one of the tested pathogens and only 2% exhibited an antimicrobial activity against all tested Pectobacterium strains. Four bioactive isolates having the greatest pathogen inhibitory capabilities and classified as belonging to the genus Streptomyces species through 16S rDNA analysis were subsequently tested for their ability to reduce in vivo soft rot symptoms on potato slices of Bintje, Yukon Gold, Russet and Norland cultivars caused by the two pathogens P. carotovorum and P. atrosepticum. This test was carried out by using biomass inoculums and culture filtrate of the isolates as treatment. Among these, strain Streptomyces sp. OE7, reduced by 65-94% symptom severity caused by the two pathogens on potato slices. Streptomyces OE7 showed a potential for controlling soft rot on potato slices and could be useful in an integrated control program against potato soft rot pathogens in the objective to reduce treatments with chemical compounds.