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Sample records for single germinating bacterial

  1. Elastic and inelastic light scattering from single bacterial spores in an optical trap allows the monitoring of spore germination dynamics

    OpenAIRE

    Peng, Lixin; Chen, De; Setlow, Peter; Li, Yong-qing

    2009-01-01

    Raman scattering spectroscopy and elastic light scattering intensity (ESLI) were used to simultaneously measure levels of Ca-dipicolinic acid (CaDPA) and changes in spore morphology and refractive index during germination of individual B. subtilis spores with and without the two redundant enzymes (CLEs), CwlJ and SleB, that degrade spores’ peptidoglycan cortex. Conclusions from these measurements include: 1) CaDPA release from individual wild-type germinating spores was biphasic; in a first h...

  2. Elastic and inelastic light scattering from single bacterial spores in an optical trap allows the monitoring of spore germination dynamics

    Science.gov (United States)

    Peng, Lixin; Chen, De; Setlow, Peter; Li, Yong-qing

    2009-01-01

    Raman scattering spectroscopy and elastic light scattering intensity (ESLI) were used to simultaneously measure levels of Ca-dipicolinic acid (CaDPA) and changes in spore morphology and refractive index during germination of individual B. subtilis spores with and without the two redundant enzymes (CLEs), CwlJ and SleB, that degrade spores’ peptidoglycan cortex. Conclusions from these measurements include: 1) CaDPA release from individual wild-type germinating spores was biphasic; in a first heterogeneous slow phase, Tlag, CaDPA levels decreased ∼15% and in the second phase ending at Trelease, remaining CaDPA was released rapidly; 2) in L-alanine germination of wild-type spores and spores lacking SleB: a) the ESLI rose ∼2-fold shortly before Tlag at T1; b) following Tlag, the ESLI again rose ∼2-fold at T2 when CaDPA levels had decreased ∼50%; and c) the ESLI reached its maximum value at ∼Trelease and then decreased; 3) in CaDPA germination of wild-type spores: a) Tlag increased and the first increase in ESLI occurred well before Tlag, consistent with different pathways for CaDPA and L-alanine germination; b) at Trelease the ESLI again reached its maximum value; 4) in L-alanine germination of spores lacking both CLEs and unable to degrade their cortex, the time ΔTrelease (Trelease–Tlag) for excretion of ≥75% of CaDPA was ∼15-fold higher than that for wild-type or sleB spores; and 5) spores lacking only CwlJ exhibited a similar, but not identical ESLI pattern during L-alanine germination to that seen with cwlJ sleB spores, and the high value for ΔTrelease. PMID:19374431

  3. Endophytic bacterial effects on seed germination and mobilization of reserves in ammodendron biofolium

    International Nuclear Information System (INIS)

    Zhu, Y.; She, X.P.

    2017-01-01

    The main aim of this study was to analyze the mobilization of storage reserves during seed germination of Ammodendron bifolium by host plant-endophytic bacteria interaction and to determine the contribution of endophytic bacteria in plant establishment. The seeds were inoculated with three different endophytic bacteria from A. bifolium, Staphylococcus sp. AY3, Kocuria sp. AY9 and Bacillus sp. AG18, and they were germinated in the dark. Fresh weight changes and early seedling growth were assessed, and the content of storage compounds was quantified using biochemical assays in all germinated and non-germinated seeds. To understand the mechanism promoting seed germination, the activities of extracellular enzymes of bacterial isolates were also analyzed by the plate assay method. The results showed that treatment with endophytic bacteria accelerated seed germination; promoted further water absorption and radicle growth; and also promoted degradation of sucrose, protein and lipids during the germination process. At the same time, our results also showed that strain AG18 was able to produce protease and amylase, strain AY9 had only amylase activity, and strain AY3 had no extracellular enzyme activity. In summary, our current study showed that (i) endophytic bacteria improved seed germination and post-germination seedling growth of A. bifolium; (ii) inoculation with endophytic bacteria could promote storage reserve mobilization during or following germination; (iii) the degradation of protein, lipids and sucrose could provide essential energy for post-germination growth; and (iv) three bacterial isolates might have different action mechanisms on seed germination. (author)

  4. Practical aspects of temperature intervention in germination and post-germination development of bacterial spores

    International Nuclear Information System (INIS)

    Stastna, J.; Vinter, V.; Babicka, J.

    1974-01-01

    Temperature dependence of germination and post-germination growth was studied in the spores of B a c i l l u s c e r e u s NCIB 8122. It was found that a temperature of 5 0 C slowed down germination, with the cells showing the capacity of synthetizing only a limited amount of proteins. The synthesis of the cellular wall, however, went on for another few hours. Thick-walled, less permeable and less metabolically active cells formed having an altered ultrastructure. A prolonged cultivation at 30 0 C resulted in the reduction of living cells while the low cultivation temperature (5 0 C) was found to have a protective effect. Pre-irradiation with 30g krad of gamma radiation increased the sensitivity of surviving cells to the cultivation conditions. Spores in the post-germination period were found to be much more resistent and alternating use of low and higher temperatures had little effect on growth

  5. Assessment of Rice Associated Bacterial Ability to Enhance Rice Seed Germination and Rice Growth Promotion

    Directory of Open Access Journals (Sweden)

    R. Gholamalizadeh

    2017-08-01

    Full Text Available ABSTRACT The application of beneficial bacteria has recently been used for sustainable agriculture. In current research, 71 bacterial isolates were obtained from rice plant and the rhizosphere soil of different paddy fields in Guilan province, Iran. After primitive investigation, 40 bacteria with typical predominant characteristics were selected. By PCR-RFLP of their 16S r-DNA gene, 8 Operational Taxonomic Units (OTUs totally consisted of 33 isolates were obtained. From all of them, 8 isolates were selected for rice seed germination experiment, then, effective isolates were used for pot experiment to evaluate their ability for promoting rice growth. All of them were able to increase rice growth and yield, but in different potential. These tested isolates were identified as Alcaligenes faecalis (DEp8, O1R4, Pantoea ananatis (AEn1, Bacillus vietnamensis (MR5, Bacillus idriensis (MR2 and Stenotrophomonas maltophilia by partial sequencing of their 16S r-DNA gene. Among them, AEn1 and MR5 produced indole-3- acetic acid (IAA in larger amounts than the other isolates and the isolates AEn1 and O1R4 were able to solubilize phosphate in higher amounts. According to the results obtained, it can be concluded that AEn1, O1R4 and MR5 can be considered as bacterial inoculants to use as alternatives for chemical fertilizers.

  6. Probing bacterial adhesion at the single-cell level

    DEFF Research Database (Denmark)

    Zeng, Guanghong; Müller, Torsten; Meyer, Rikke Louise

    be considered. We have developed a simple and versatile method to make single-cell bacterial probes for measuring single cell adhesion by force spectroscopy using atomic force microscopy (AFM). A single-cell probe was readily made by picking up a bacterial cell from a glass surface by approaching a tipless AFM...... cantilever coated with the commercial cell adhesive CellTakTM. We applied the method to study adhesion of living cells to abiotic surfaces at the single-cell level. Immobilisation of single bacterial cells to the cantilever was stable for several hours, and viability was confirmed by Live/Dead staining...... on the adhesion force, we explored the bond formation and adhesive strength of four different bacterial strains towards three abiotic substrates with variable hydrophobicity and surface roughness. The adhesion force and final rupture length were dependent on bacterial strains, surfaces properties, and time...

  7. Responses of single germinal-center B cells in T-cell-dependent microculture.

    Science.gov (United States)

    George, A; Cebra, J J

    1991-01-01

    B cells purified from the germinal centers (GCs) of murine Peyer's patches can be stimulated in a clonal microculture containing helper T cells and dendritic cells to divide and secrete immunoglobulin. Intraclonal isotype switching occurs, and a variety of immunoglobulin isotypes, including IgA, is secreted. Memory cells, which generate clones secreting IgA exclusively, are only rarely identified in the GC B-cell subset. Such memory cells can, however, be readily identified among unfractionated Peyer's patch B cells, and in non-GC subsets of B cells. The results suggest that the GC does not contain IgA memory cells that can be restimulated in vitro to secrete only IgA. When division of GC B cells is prevented by irradiation or aphidicholin treatment, a large subset that secretes IgA as the sole immunoglobulin isotype is seen, and the output of presumably single B cells is large enough to be scored by RIA. Both helper T cells and dendritic cells are required for the phenomenon. The data indicate that commitment to IgA secretion occurs in Peyer's patch GCs and suggest that the prolific cell division known to be supported in GCs may forestall terminal differentiation of preplasmablasts to immunoglobulin secretion.

  8. Micro-magnet arrays for specific single bacterial cell positioning

    Energy Technology Data Exchange (ETDEWEB)

    Pivetal, Jérémy, E-mail: jeremy.piv@netcmail.com [Ecole Centrale de Lyon, CNRS UMR 5005, Laboratoire Ampère, F-69134 Écully (France); Royet, David [Ecole Centrale de Lyon, CNRS UMR 5005, Laboratoire Ampère, F-69134 Écully (France); Ciuta, Georgeta [Univ. Grenoble Alpes, Inst NEEL, F-38042 Grenoble (France); CNRS, Inst NEEL, F-38042 Grenoble (France); Frenea-Robin, Marie [Université de Lyon, Université Lyon 1, CNRS UMR 5005, Laboratoire Ampère, F-69622 Villeurbanne (France); Haddour, Naoufel [Ecole Centrale de Lyon, CNRS UMR 5005, Laboratoire Ampère, F-69134 Écully (France); Dempsey, Nora M. [Univ. Grenoble Alpes, Inst NEEL, F-38042 Grenoble (France); CNRS, Inst NEEL, F-38042 Grenoble (France); Dumas-Bouchiat, Frédéric [Univ Limoges, CNRS, SPCTS UMR 7513, 12 Rue Atlantis, F-87068 Limoges (France); Simonet, Pascal [Ecole Centrale de Lyon, CNRS UMR 5005, Laboratoire Ampère, F-69134 Écully (France)

    2015-04-15

    In various contexts such as pathogen detection or analysis of microbial diversity where cellular heterogeneity must be taken into account, there is a growing need for tools and methods that enable microbiologists to analyze bacterial cells individually. One of the main challenges in the development of new platforms for single cell studies is to perform precise cell positioning, but the ability to specifically target cells is also important in many applications. In this work, we report the development of new strategies to selectively trap single bacterial cells upon large arrays, based on the use of micro-magnets. Escherichia coli bacteria were used to demonstrate magnetically driven bacterial cell organization. In order to provide a flexible approach adaptable to several applications in the field of microbiology, cells were magnetically and specifically labeled using two different strategies, namely immunomagnetic labeling and magnetic in situ hybridization. Results show that centimeter-sized arrays of targeted, isolated bacteria can be successfully created upon the surface of a flat magnetically patterned hard magnetic film. Efforts are now being directed towards the integration of a detection tool to provide a complete micro-system device for a variety of microbiological applications. - Highlights: 1.We report a new approach to selectively micropattern bacterial cells individually upon micro-magnet arrays. 2.Permanent micro-magnets of a size approaching that of bacteria could be fabricated using a Thermo-Magnetic Patterning process. 3.Bacterial cells were labeled using two different magnetic labeling strategies providing flexible approach adaptable to several applications in the field of microbiology.

  9. High resolution imaging of surface patterns of single bacterial cells

    International Nuclear Information System (INIS)

    Greif, Dominik; Wesner, Daniel; Regtmeier, Jan; Anselmetti, Dario

    2010-01-01

    We systematically studied the origin of surface patterns observed on single Sinorhizobium meliloti bacterial cells by comparing the complementary techniques atomic force microscopy (AFM) and scanning electron microscopy (SEM). Conditions ranged from living bacteria in liquid to fixed bacteria in high vacuum. Stepwise, we applied different sample modifications (fixation, drying, metal coating, etc.) and characterized the observed surface patterns. A detailed analysis revealed that the surface structure with wrinkled protrusions in SEM images were not generated de novo but most likely evolved from similar and naturally present structures on the surface of living bacteria. The influence of osmotic stress to the surface structure of living cells was evaluated and also the contribution of exopolysaccharide and lipopolysaccharide (LPS) by imaging two mutant strains of the bacterium under native conditions. AFM images of living bacteria in culture medium exhibited surface structures of the size of single proteins emphasizing the usefulness of AFM for high resolution cell imaging.

  10. Probing living bacterial adhesion by single cell force spectroscopy using atomic force microscopy

    DEFF Research Database (Denmark)

    Zeng, Guanghong; Ogaki, Ryosuke; Regina, Viduthalai R.

    be considered. We have therefore developed a simple and versatile method to make single-cell bacterial probes for measuring single cell adhesion with atomic force microscopy (AFM).[1] A single-cell probe was readily made by picking up a bacterial cell from a glass surface using a tipless AFM cantilever coated...... random immobilization is obtained by submerging the cantilever in a bacterial suspension. The reported method provides a general platform for investigating single cell interactions of bacteria with different surfaces and other cells by AFM force spectroscopy, thus improving our understanding....... The strain-dependent susceptibility to bacterial colonization on conventional PLL-g-PEG illustrates how bacterial diversity challenges development of “universal” antifouling coatings, and AFM single-cell force spectroscopy was proven to be a powerful tool to provide insights into the molecular mechanisms...

  11. Barley germination

    DEFF Research Database (Denmark)

    Daneri-Castro, Sergio N.; Svensson, Birte; Roberts, Thomas H.

    2016-01-01

    germination. Lastly, the application of metabolomics to barley grain germination provides essential data on biochemical processes, including insights into the formation of compounds that contribute to malt quality. To maximize the benefits of the 'omics' revolution to the malting industry, there is a need......Germination of barley grain is central to the malting industry and is a valuable model for cereal grain germination. Our current understanding of the complexity of germination at the molecular level is facilitated by access to genomic, transcriptomic, proteomic and metabolomic data. Here we review...... of germination in the context of industrial malting. For transcriptomics, recent advances in sequencing the barley genome allow next-generation sequencing approaches to reveal novel effects of variety and environment on germination. For proteomics, selection of the source tissue(s) and the protein extraction...

  12. Single seed NIR as a fast method to predict germination ability in Pak Choi

    DEFF Research Database (Denmark)

    Gislum, René; Deleuran, Lise Christina; Olesen, Merete Halkjær

    2012-01-01

    Single seed NIR has further been tested to determine the applicability for prediction of seed viability in radish (Raphanus sativus L.) seeds and spinach (Spinacia oleracea L.) seeds. The studies show the possibility of using NIR spectroscopy in a seed separating process in the future, provided...

  13. Germination of red alder seed.

    Science.gov (United States)

    M.A. Radwan; D.S. DeBell

    1981-01-01

    Red alder seeds were collected from six locations throughout the natural range of the species. Each seed lot was obtained from a single tree, and the seeds were used to determine germination with and without stratification treatment. Irrespective of treatment, germination varied significantly (P

  14. Germination and dormancy of single tomato seeds : a study using non-invasive molecular and biophysical techniques

    NARCIS (Netherlands)

    Spoelstra, P.

    2002-01-01

    Formation , germination and dormancy of seeds are important steps in the life cycle of higher plants. The seed is the generative dispersal unit, which enables plants to spread and survive through periods or seasons of less favourable conditions. In agriculture tomato is

  15. Simultaneous Microcystis Algicidal and Microcystin Degrading Capability by a Single Acinetobacter Bacterial Strain.

    Science.gov (United States)

    Li, Hong; Ai, Hainan; Kang, Li; Sun, Xingfu; He, Qiang

    2016-11-01

    Measures for removal of toxic harmful algal blooms often cause lysis of algal cells and release of microcystins (MCs). In this study, Acinetobacter sp. CMDB-2 that exhibits distinct algal lysing activity and MCs degradation capability was isolated. The physiological response and morphological characteristics of toxin-producing Microcystis aeruginosa, the dynamics of intra- and extracellular MC-LR concentration were studied in an algal/bacterial cocultured system. The results demonstrated that Acinetobacter sp. CMDB-2 caused thorough decomposition of algal cells and impairment of photosynthesis within 24 h. Enhanced algal lysis and MC-LR release appeared with increasing bacterial density from 1 × 10 3 to 1 × 10 7 cells/mL; however, the MC-LR was reduced by nearly 94% within 14 h irrespective of bacterial density. Measurement of extracellular and intracellular MC-LR revealed that the toxin was decreased by 92% in bacterial cell incubated systems relative to control and bacterial cell-free filtrate systems. The results confirmed that the bacterial metabolite caused 92% lysis of Microcystis aeruginosa cells, whereas the bacterial cells were responsible for approximately 91% reduction of MC-LR. The joint efforts of the bacterium and its metabolite accomplished the sustainable removal of algae and MC-LR. This is the first report of a single bacterial strain that achieves these dual actions.

  16. Single-bacterium nanomechanics in biomedicine: unravelling the dynamics of bacterial cells

    International Nuclear Information System (INIS)

    Aguayo, S; Bozec, L; Donos, N; Spratt, D

    2015-01-01

    The use of the atomic force microscope (AFM) in microbiology has progressed significantly throughout the years since its first application as a high-resolution imaging instrument. Modern AFM setups are capable of characterizing the nanomechanical behaviour of bacterial cells at both the cellular and molecular levels, where elastic properties and adhesion forces of single bacterium cells can be examined under different experimental conditions. Considering that bacterial and biofilm-mediated infections continue to challenge the biomedical field, it is important to understand the biophysical events leading towards bacterial adhesion and colonization on both biological and non-biological substrates. The purpose of this review is to present the latest findings concerning the field of single-bacterium nanomechanics, and discuss future trends and applications of nanoindentation and single-cell force spectroscopy techniques in biomedicine. (topical review)

  17. High-Throughput Scoring of Seed Germination.

    Science.gov (United States)

    Ligterink, Wilco; Hilhorst, Henk W M

    2017-01-01

    High-throughput analysis of seed germination for phenotyping large genetic populations or mutant collections is very labor intensive and would highly benefit from an automated setup. Although very often used, the total germination percentage after a nominated period of time is not very informative as it lacks information about start, rate, and uniformity of germination, which are highly indicative of such traits as dormancy, stress tolerance, and seed longevity. The calculation of cumulative germination curves requires information about germination percentage at various time points. We developed the GERMINATOR package: a simple, highly cost-efficient, and flexible procedure for high-throughput automatic scoring and evaluation of germination that can be implemented without the use of complex robotics. The GERMINATOR package contains three modules: (I) design of experimental setup with various options to replicate and randomize samples; (II) automatic scoring of germination based on the color contrast between the protruding radicle and seed coat on a single image; and (III) curve fitting of cumulative germination data and the extraction, recap, and visualization of the various germination parameters. GERMINATOR is a freely available package that allows the monitoring and analysis of several thousands of germination tests, several times a day by a single person.

  18. Development of a Single Locus Sequence Typing (SLST) Scheme for Typing Bacterial Species Directly from Complex Communities.

    Science.gov (United States)

    Scholz, Christian F P; Jensen, Anders

    2017-01-01

    The protocol describes a computational method to develop a Single Locus Sequence Typing (SLST) scheme for typing bacterial species. The resulting scheme can be used to type bacterial isolates as well as bacterial species directly from complex communities using next-generation sequencing technologies.

  19. Rapid approach for cloning bacterial single-genes directly from soils ...

    African Journals Online (AJOL)

    Obtaining functional genes of bacteria from environmental samples usually depends on library-based approach which is not favored as its large amount of work with small possibility of positive clones. A kind of bacterial single-gene encoding glutamine synthetase (GS) was selected as example to detect the efficiency of ...

  20. Quantifying bacterial adhesion on antifouling polymer brushes via single-cell force spectroscopy

    Czech Academy of Sciences Publication Activity Database

    Rodriguez-Emmenegger, Cesar; Janel, S.; de los Santos Pereira, Andres; Bruns, M.; Lafont, F.

    2015-01-01

    Roč. 6, č. 31 (2015), s. 5740-5751 ISSN 1759-9954 R&D Projects: GA ČR(CZ) GJ15-09368Y; GA MŠk(CZ) ED1.1.00/02.0109 Grant - others:OPPK(XE) CZ.2.16/3.1.00/21545 Program:OPPK Institutional support: RVO:61389013 Keywords : antifouling polymer brushes * single-cell force spectroscopy * bacterial adhesion Subject RIV: BO - Biophysics Impact factor: 5.687, year: 2015

  1. Adult bacterial myositis: report of a single-center series of 26 cases

    Directory of Open Access Journals (Sweden)

    Fernando Gallucci

    2016-09-01

    Full Text Available Bacterial infections involving muscle are quite uncommon and generally require specific predisposing factors. Bacterial myositis is more rarely described in the typical kind of patients observed in Internal Medicine (presence of multiple co-morbidities, partial/limited immune-deficiency, advanced age. Twenty-six patients suffering from bacterial myositis (8 women and 18 men; mean age 58.5 years, range 27-82 observed in a single Internal Medicine Unit were reported. Muscles involved were ileopsoas, thigh, paravertebral, gluteus, calf, forearm and rectus abdomen. Simultaneous presence of arthritis was registered in 17 patients and all patients presented relevant comorbidity. Main cultured bacteria were Staphylococcus aureus, Escherichia coli, other Gram-negative bacteria, Streptococcus spp. Multi-drug-resistance was observed in 14 out 26 (53.8%. Computed tomography, ultrasound and magnetic resonance imaging were utilized for diagnostic purposes. Antibiotic treatment was administered to all patients. Surgical debridement and drainage were performed in 12 patients; 7 patients were treated with percutaneous aspiration and drainage. At discharge, relevant functional impairment was present in 17 patients (65.3%. Four patients died (in-hospital mortality 7.6%, global mortality at three months 15.3%. Management of bacterial myositis is difficult and its prognosis is poor. In the near future, this demanding infection will be more frequently observed in Internal Medicine setting as comorbidity, which is very often the main characteristic of these patients.

  2. Rapid Characterization of Bacterial Electrogenicity Using a Single-Sheet Paper-Based Electrofluidic Array

    Directory of Open Access Journals (Sweden)

    Yang Gao

    2017-07-01

    Full Text Available Electrogenicity, or bacterial electron transfer capacity, is an important application which offers environmentally sustainable advances in the fields of biofuels, wastewater treatment, bioremediation, desalination, and biosensing. Significant boosts in this technology can be achieved with the growth of synthetic biology that manipulates microbial electron transfer pathways, thereby potentially significantly improving their electrogenic potential. There is currently a need for a high-throughput, rapid, and highly sensitive test array to evaluate the electrogenic properties of newly discovered and/or genetically engineered bacterial species. In this work, we report a single-sheet, paper-based electrofluidic (incorporating both electronic and fluidic structure screening platform for rapid, sensitive, and potentially high-throughput characterization of bacterial electrogenicity. This novel screening array uses (i a commercially available wax printer for hydrophobic wax patterning on a single sheet of paper and (ii water-dispersed electrically conducting polymer mixture, poly(3,4-ethylenedioxythiophene:polystyrene sulfonate, for full integration of electronic and fluidic components into the paper substrate. The engineered 3-D, microporous, hydrophilic, and conductive paper structure provides a large surface area for efficient electron transfer. This results in rapid and sensitive power assessment of electrogenic bacteria from a microliter sample volume. We validated the effectiveness of the sensor array using hypothesis-driven genetically modified Pseudomonas aeruginosa mutant strains. Within 20 min, we observed that the sensor platform successfully measured the electricity-generating capacities of five isogenic mutants of P. aeruginosa while distinguishing their differences from genetically unmodified bacteria.

  3. Motion of single MreB bacterial actin proteins in Caulobacter show treadmilling in vivo

    Science.gov (United States)

    Moerner, W. E.; Kim, Soyeon; Gitai, Zemer; Kinkhabwala, Anika; McAdams, Harley; Shapiro, Lucy

    2006-03-01

    Ensemble imaging of a bacterial actin homologue, the MreB protein, suggests that the MreB proteins form a dynamic filamentous spiral along the long axis of the cell in Caulobacter crescentus. MreB contracts and expands along the cell axis and plays an important role in cell shape and polarity maintenance, as well as chromosome segregation and translocation of the origin of replication during cell division. In this study we investigated the real-time polymerization of MreB in Caulobacter crescentus using single-molecule fluorescence imaging. With time-lapse imaging, polymerized MreB could be distinguished from cytoplasmic MreB monomers, because single monomeric MreB showed fast motion characteristic of Brownian diffusion, while single polymerized MreB displayed slow, directed motion. This directional movement of labeled MreB in the growing polymer implies that treadmilling is the predominant mechanism in MreB filament formation. These single-molecule imaging experiments provide the first available information on the velocity of bacterial actin polymerization in a living cell.

  4. Bacterial single-stranded DNA-binding proteins are phosphorylated on tyrosine

    DEFF Research Database (Denmark)

    Mijakovic, Ivan; Petranovic, Dina; Macek, B

    2006-01-01

    for phosphotyrosine-containing proteins in Streptomyces griseus by immunoaffinity chromatography identified bacterial SSBs as a novel target of bacterial tyrosine kinases. Since genes encoding protein-tyrosine kinases (PTKs) have not been recognized in streptomycetes, and SSBs from Streptomyces coelicolor (Sc......SSB) and Bacillus subtilis (BsSSB) share 38.7% identity, we used a B.subtilis protein-tyrosine kinase YwqD to phosphorylate two cognate SSBs (BsSSB and YwpH) in vitro. We demonstrate that in vivo phosphorylation of B.subtilis SSB occurs on tyrosine residue 82, and this reaction is affected antagonistically...... by kinase YwqD and phosphatase YwqE. Phosphorylation of B.subtilis SSB increased binding almost 200-fold to single-stranded DNA in vitro. Tyrosine phosphorylation of B.subtilis, S.coelicolor and Escherichia coli SSBs occured while they were expressed in E.coli, indicating that tyrosine phosphorylation...

  5. In situ probing the interior of single bacterial cells at nanometer scale

    International Nuclear Information System (INIS)

    Liu, Boyin; Wah Ng, Tuck; Fu, Jing; Hemayet Uddin, Md; Paterson, David L; Velkov, Tony; Li, Jian

    2014-01-01

    We report a novel approach to probe the interior of single bacterial cells at nanometre resolution by combining focused ion beam (FIB) and atomic force microscopy (AFM). After removing layers of pre-defined thickness in the order of 100 nm on the target bacterial cells with FIB milling, AFM of different modes can be employed to probe the cellular interior under both ambient and aqueous environments. Our initial investigations focused on the surface topology induced by FIB milling and the hydration effects on AFM measurements, followed by assessment of the sample protocols. With fine-tuning of the process parameters, in situ AFM probing beneath the bacterial cell wall was achieved for the first time. We further demonstrate the proposed method by performing a spatial mapping of intracellular elasticity and chemistry of the multi-drug resistant strain Klebsiella pneumoniae cells prior to and after it was exposed to the ‘last-line’ antibiotic polymyxin B. Our results revealed increased stiffness occurring in both surface and interior regions of the treated cells, suggesting loss of integrity of the outer membrane from polymyxin treatments. In addition, the hydrophobicity measurement using a functionalized AFM tip was able to highlight the evident hydrophobic portion of the cell such as the regions containing cell membrane. We expect that the proposed FIB–AFM platform will help in gaining deeper insights of bacteria–drug interactions to develop potential strategies for combating multi-drug resistance. (paper)

  6. A method for the determination of bacterial spore DNA content based on isotopic labelling, spore germination and diphenylamine assay; ploidy of spores of several Bacillus species

    International Nuclear Information System (INIS)

    Hauser, P.M.; Karamata, D.

    1992-01-01

    A reliable method for measuring the spore DNA content, based on radioactive DNA labelling, spore germination in absence of DNA replication and diphenylamine assay, was developed. The accuracy of the method, within 10 - 15%, is adequate for determining the number of chromosomes per spore, provided that the genome size is known. B subtilis spores were shown to be invariably monogenomic, while those of larger bacilli Bacillus megaterium, Bacillus cereus and Bacillus thuringiensis, often, if not invariably, contain two genomes. Attempts to modify the spore DNA content of B subtilis by altering the richness of the sporulation medium, the sporulation conditions (liquid or solid medium), or by mutation, were apparently unsuccessful. An increase of spore size with medium richness, not accompanied by an increase in DNA content, was observed. The implication of the apparently species-specific spore ploidy and the influence of the sporulation conditions on spore size and shape are discussed

  7. Real-time Bacterial Detection by Single Cell Based Sensors UsingSynchrotron FTIR Spectromicroscopy

    Energy Technology Data Exchange (ETDEWEB)

    Veiseh, Mandana; Veiseh, Omid; Martin, Michael C.; Bertozzi,Carolyn; Zhang, Miqin

    2005-08-10

    Microarrays of single macrophage cell based sensors weredeveloped and demonstrated for real time bacterium detection bysynchrotron FTIR microscopy. The cells were patterned on gold-SiO2substrates via a surface engineering technique by which the goldelectrodes were immobilized with fibronectin to mediate cell adhesion andthe silicon oxide background were passivated with PEG to resist proteinadsorption and cell adhesion. Cellular morphology and IR spectra ofsingle, double, and triple cells on gold electrodes exposed tolipopolysaccharide (LPS) of different concentrations were compared toreveal the detection capabilities of these biosensors. The single-cellbased sensors were found to generate the most significant IR wave numbervariation and thus provide the highest detection sensitivity. Changes inmorphology and IR spectrum for single cells exposed to LPS were found tobe time- and concentration-dependent and correlated with each other verywell. FTIR spectra from single cell arrays of gold electrodes withsurface area of 25 mu-m2, 100 mu-m2, and 400 mu-m2 were acquired usingboth synchrotron and conventional FTIR spectromicroscopes to study thesensitivity of detection. The results indicated that the developedsingle-cell platform can be used with conventional FTIRspectromicroscopy. This technique provides real-time, label-free, andrapid bacterial detection, and may allow for statistic and highthroughput analyses, and portability.

  8. Single molecules of the bacterial actin MreB undergo directed treadmilling motion in Caulobacter crescentus.

    Science.gov (United States)

    Kim, So Yeon; Gitai, Zemer; Kinkhabwala, Anika; Shapiro, Lucy; Moerner, W E

    2006-07-18

    The actin cytoskeleton represents a key regulator of multiple essential cellular functions in both eukaryotes and prokaryotes. In eukaryotes, these functions depend on the orchestrated dynamics of actin filament assembly and disassembly. However, the dynamics of the bacterial actin homolog MreB have yet to be examined in vivo. In this study, we observed the motion of single fluorescent MreB-yellow fluorescent protein fusions in living Caulobacter cells in a background of unlabeled MreB. With time-lapse imaging, polymerized MreB [filamentous MreB (fMreB)] and unpolymerized MreB [globular MreB (gMreB)] monomers could be distinguished: gMreB showed fast motion that was characteristic of Brownian diffusion, whereas the labeled molecules in fMreB displayed slow, directed motion. This directional movement of labeled MreB in the growing polymer provides an indication that, like actin, MreB monomers treadmill through MreB filaments by preferential polymerization at one filament end and depolymerization at the other filament end. From these data, we extract several characteristics of single MreB filaments, including that they are, on average, much shorter than the cell length and that the direction of their polarized assembly seems to be independent of the overall cellular polarity. Thus, MreB, like actin, exhibits treadmilling behavior in vivo, and the long MreB structures that have been visualized in multiple bacterial species seem to represent bundles of short filaments that lack a uniform global polarity.

  9. Mass Cytometry for Detection of Silver at the Bacterial Single Cell Level

    Directory of Open Access Journals (Sweden)

    Yuting Guo

    2017-07-01

    Full Text Available Background: Mass cytometry (Cytometry by Time of Flight, CyTOF allows single-cell characterization on the basis of specific metal-based cell markers. In addition, other metals in the mass range such as silver can be detected per cell. Bacteria are known to be sensible to silver and a protocol was developed to measure both the number of affected cells per population and the quantities of silver per cell.Methods: For mass cytometry ruthenium red was used as a marker for all cells of a population while parallel application of cisplatin discriminated live from dead cells. Silver quantities per cell and frequencies of silver containing cells in a population were measured by mass cytometry. In addition, live/dead subpopulations were analyzed by flow cytometry and distinguished by cell sorting based on ruthenium red and propidium iodide double staining. Verification of the cells’ silver load was performed on the bulk level by using ICP-MS in combination with cell sorting. The protocol was developed by conveying both, fast and non-growing Pseudomonas putida cells as test organisms.Results: A workflow for labeling bacteria in order to be analyzed by mass cytometry was developed. Three different parameters were tested: ruthenium red provided counts for all bacterial cells in a population while consecutively applied cisplatin marked the frequency of dead cells. Apparent population heterogeneity was detected by different frequencies of silver containing cells. Silver quantities per cell were also well measurable. Generally, AgNP-10 treatment caused higher frequencies of dead cells, higher frequencies of silver containing cells and higher per-cell silver quantities. Due to an assumed chemical equilibrium of free and bound silver ions live and dead cells were associated with silver in equal quantities and this preferably during exponential growth. With ICP-MS up to 1.5 fg silver per bacterial cell were detected.Conclusion: An effective mass cytometry

  10. A Germination Simulation.

    Science.gov (United States)

    Hershey, David R.

    1995-01-01

    Presents an activity that involves using sponge seedlings to demonstrate the germination process without the usual waiting period. Discusses epigeous versus hypogeous germination, and cotyledon number and biodiversity. (JRH)

  11. GERMINATOR: a software package for high-throughput scoring and curve fitting of Arabidopsis seed germination.

    Science.gov (United States)

    Joosen, Ronny V L; Kodde, Jan; Willems, Leo A J; Ligterink, Wilco; van der Plas, Linus H W; Hilhorst, Henk W M

    2010-04-01

    Over the past few decades seed physiology research has contributed to many important scientific discoveries and has provided valuable tools for the production of high quality seeds. An important instrument for this type of research is the accurate quantification of germination; however gathering cumulative germination data is a very laborious task that is often prohibitive to the execution of large experiments. In this paper we present the germinator package: a simple, highly cost-efficient and flexible procedure for high-throughput automatic scoring and evaluation of germination that can be implemented without the use of complex robotics. The germinator package contains three modules: (i) design of experimental setup with various options to replicate and randomize samples; (ii) automatic scoring of germination based on the color contrast between the protruding radicle and seed coat on a single image; and (iii) curve fitting of cumulative germination data and the extraction, recap and visualization of the various germination parameters. The curve-fitting module enables analysis of general cumulative germination data and can be used for all plant species. We show that the automatic scoring system works for Arabidopsis thaliana and Brassica spp. seeds, but is likely to be applicable to other species, as well. In this paper we show the accuracy, reproducibility and flexibility of the germinator package. We have successfully applied it to evaluate natural variation for salt tolerance in a large population of recombinant inbred lines and were able to identify several quantitative trait loci for salt tolerance. Germinator is a low-cost package that allows the monitoring of several thousands of germination tests, several times a day by a single person.

  12. Bacterial meningitis

    NARCIS (Netherlands)

    Roos, Karen L.; van de Beek, Diederik

    2010-01-01

    Bacterial meningitis is a neurological emergency. Empiric antimicrobial and adjunctive therapy should be initiated as soon as a single set of blood cultures has been obtained. Clinical signs suggestive of bacterial meningitis include fever, headache, meningismus, vomiting, photophobia, and an

  13. Single-molecule approach to bacterial genomic comparisons via optical mapping.

    Energy Technology Data Exchange (ETDEWEB)

    Zhou, Shiguo [Univ. Wisc.-Madison; Kile, A. [Univ. Wisc.-Madison; Bechner, M. [Univ. Wisc.-Madison; Kvikstad, E. [Univ. Wisc.-Madison; Deng, W. [Univ. Wisc.-Madison; Wei, J. [Univ. Wisc.-Madison; Severin, J. [Univ. Wisc.-Madison; Runnheim, R. [Univ. Wisc.-Madison; Churas, C. [Univ. Wisc.-Madison; Forrest, D. [Univ. Wisc.-Madison; Dimalanta, E. [Univ. Wisc.-Madison; Lamers, C. [Univ. Wisc.-Madison; Burland, V. [Univ. Wisc.-Madison; Blattner, F. R. [Univ. Wisc.-Madison; Schwartz, David C. [Univ. Wisc.-Madison

    2004-01-01

    Modern comparative genomics has been established, in part, by the sequencing and annotation of a broad range of microbial species. To gain further insights, new sequencing efforts are now dealing with the variety of strains or isolates that gives a species definition and range; however, this number vastly outstrips our ability to sequence them. Given the availability of a large number of microbial species, new whole genome approaches must be developed to fully leverage this information at the level of strain diversity that maximize discovery. Here, we describe how optical mapping, a single-molecule system, was used to identify and annotate chromosomal alterations between bacterial strains represented by several species. Since whole-genome optical maps are ordered restriction maps, sequenced strains of Shigella flexneri serotype 2a (2457T and 301), Yersinia pestis (CO 92 and KIM), and Escherichia coli were aligned as maps to identify regions of homology and to further characterize them as possible insertions, deletions, inversions, or translocations. Importantly, an unsequenced Shigella flexneri strain (serotype Y strain AMC[328Y]) was optically mapped and aligned with two sequenced ones to reveal one novel locus implicated in serotype conversion and several other loci containing insertion sequence elements or phage-related gene insertions. Our results suggest that genomic rearrangements and chromosomal breakpoints are readily identified and annotated against a prototypic sequenced strain by using the tools of optical mapping.

  14. Nicotinamidase activity is important for germination.

    Science.gov (United States)

    Hunt, Lee; Holdsworth, Michael J; Gray, Julie E

    2007-08-01

    It has been suggested that nicotinamide must be degraded during germination; however, the enzyme responsible and its physiological role have not been previously studied. We have identified an Arabidopsis gene, NIC2, that is expressed at relatively high levels in mature seed, and encodes a nicotinamidase enzyme with homology to yeast and bacterial nicotinamidases. Seed of a knockout mutant, nic2-1, had reduced nicotinamidase activity, retarded germination and impaired germination potential. nic2-1 germination was restored by after-ripening or moist chilling, but remained hypersensitive to application of nicotinamide or ABA. Nicotinamide is a known inhibitor of NAD-degrading poly(ADP-ribose) polymerases (PARP enzymes) that are implicated in DNA repair. We found reduced poly(ADP)ribosylation levels in nic2-1 seed, which were restored by moist chilling. Furthermore, nic2-1 seed had elevated levels of NAD, and germination was hypersensitive to methyl methanesulphonate (MMS), suggesting that PARP activity and DNA repair responses were impaired. We suggest that nicotinamide is normally metabolized by NIC2 during moist chilling or after-ripening, which relieves inhibition of PARP activity and allows DNA repair to occur prior to germination.

  15. Germination and elongation of flax in microgravity

    Science.gov (United States)

    Levine, Howard G.; Anderson, Ken; Boody, April; Cox, Dave; Kuznetsov, Oleg A.; Hasenstein, Karl H.

    2003-05-01

    This experiment was conducted as part of a risk mitigation payload aboard the Space Shuttle Atlantis on STS-101. The objectives were to test a newly developed water delivery system, and to determine the optimal combination of water volume and substrate for the imbibition and germination of flax ( Linum usitatissimum) seeds in space. Two different combinations of germination paper were tested for their ability to absorb, distribute, and retain water in microgravity. A single layer of thick germination paper was compared with one layer of thin germination paper under a layer of thick paper. Paper strips were cut to fit snugly into seed cassettes, and seeds were glued to them with the micropyle ends pointing outward. Water was delivered in small increments that traveled through the paper via capillary action. Three water delivery volumes were tested, with the largest (480 μL) outperforming the 400 μL, and 320 μL volumes for percent germination (90.6%) and root growth (mean = 4.1 mm) during the 34-hour spaceflight experiment. The ground control experiment yielded similar results, but with lower rates of germination (84.4%) and shorter root lengths (mean = 2.8 mm). It is not clear if the roots emerged more quickly in microgravity and/or grew faster than the ground controls. The single layer of thick germination paper generally exhibited better overall growth than the two layered option. Significant seed position effects were observed in both the flight and ground control experiments. Overall, the design of the water delivery system, seed cassettes and the germination paper strip concept was validated as an effective method for promoting seed germination and root growth under microgravity conditions.

  16. Germination and elongation of flax in microgravity

    Science.gov (United States)

    Levine, Howard G.; Anderson, Ken; Boody, April; Cox, Dave; Kuznetsov, Oleg A.; Hasenstein, Karl H.

    2003-01-01

    This experiment was conducted as part of a risk mitigation payload aboard the Space Shuttle Atlantis on STS-101. The objectives were to test a newly developed water delivery system, and to determine the optimal combination of water volume and substrate for the imbibition and germination of flax (Linum usitatissimum) seeds in space. Two different combinations of germination paper were tested for their ability to absorb, distribute, and retain water in microgravity. A single layer of thick germination paper was compared with one layer of thin germination paper under a layer of thick paper. Paper strips were cut to fit snugly into seed cassettes, and seeds were glued to them with the micropyle ends pointing outward. Water was delivered in small increments that traveled through the paper via capillary action. Three water delivery volumes were tested, with the largest (480 microliters) outperforming the 400 microliters and 320 microliters volumes for percent germination (90.6%) and root growth (mean=4.1 mm) during the 34-hour spaceflight experiment. The ground control experiment yielded similar results, but with lower rates of germination (84.4%) and shorter root lengths (mean=2.8 mm). It is not clear if the roots emerged more quickly in microgravity and/or grew faster than the ground controls. The single layer of thick germination paper generally exhibited better overall growth than the two layered option. Significant seed position effects were observed in both the flight and ground control experiments. Overall, the design of the water delivery system, seed cassettes and the germination paper strip concept was validated as an effective method for promoting seed germination and root growth under microgravity conditions. c2003 COSPAR. Published by Elsevier Ltd. All rights reserved.

  17. The Use of Germinants to Potentiate the Sensitivity of Bacillus anthracis Spores to Peracetic Acid.

    Science.gov (United States)

    Celebi, Ozgur; Buyuk, Fatih; Pottage, Tom; Crook, Ant; Hawkey, Suzanna; Cooper, Callum; Bennett, Allan; Sahin, Mitat; Baillie, Leslie

    2016-01-01

    Elimination of Bacillus anthracis spores from the environment is a difficult and costly process due in part to the toxicity of current sporicidal agents. For this reason we investigated the ability of the spore germinants L-alanine (100 mM) and inosine (5 mM) to reduce the concentration of peracetic acid (PAA) required to inactivate B. anthracis spores. While L-alanine significantly enhanced (p = 0.0085) the bactericidal activity of 500 ppm PAA the same was not true for inosine suggesting some form of negative interaction. In contrast the germinant combination proved most effective at 100 ppm PAA (p = 0.0009). To determine if we could achieve similar results in soil we treated soil collected from the burial site of an anthrax infected animal which had been supplemented with spores of the Sterne strain of B. anthracis to increase the level of contamination to 10(4) spores/g. Treatment with germinants followed 1 h later by 5000 ppm PAA eliminated all of the spores. In contrast direct treatment of the animal burial site using this approach delivered using a back pack sprayer had no detectable effect on the level of B. anthracis contamination or on total culturable bacterial numbers over the course of the experiment. It did trigger a significant, but temporary, reduction (p < 0.0001) in the total spore count suggesting that germination had been triggered under real world conditions. In conclusion, we have shown that the application of germinants increase the sensitivity of bacterial spores to PAA. While the results of the single field trial were inconclusive, the study highlighted the potential of this approach and the challenges faced when attempting to perform real world studies on B. anthracis spores contaminated sites.

  18. The use of germinants to potentiate the sensitivity of Bacillus anthracis spores to peracetic acid

    Directory of Open Access Journals (Sweden)

    Ozgur eCelebi

    2016-01-01

    Full Text Available Elimination of Bacillus anthracis spores from the environment is a difficult and costly process due in part to the toxicity of current sporicidal agents. For this reason we investigated the ability of the spore germinants L-alanine (100 mM and inosine (5 mM to reduce the concentration of peracetic acid (PAA required to inactivate B.anthracis spores. While L-alanine significantly enhanced (p=0.0085 the bactericidal activity of 500 ppm PAA the same was not true for inosine suggesting some form of negative interaction. In contrast the germinant combination proved most effective at 100 ppm PAA (p=0.0009. To determine if we could achieve similar results in soil we treated soil collected from the burial site of an anthrax infected animal which had been supplemented with spores of the Sterne strain of B.anthracis to increase the level of contamination to 104 spores/g. Treatment with germinants followed one hour later by 5000 ppm PAA eliminated all of the spores. In contrast direct treatment of the animal burial site using this approach delivered using a back pack sprayer had no detectable effect on the level of B.anthracis contamination or on total culturable bacterial numbers over the course of the experiment. It did trigger a significant, but temporary, reduction (p<0.0001 in the total spore count suggesting that germination had been triggered under real world conditions. In conclusion, we have shown that the application of germinants increase the sensitivity of bacterial spores to PAA. While the results of the single field trial were inconclusive, the study highlighted the potential of this approach and the challenges faced when attempting to perform real world studies on B.anthracis spores contaminated sites.

  19. Screening of a Brassica napus bacterial artificial chromosome library using highly parallel single nucleotide polymorphism assays

    Science.gov (United States)

    2013-01-01

    Background Efficient screening of bacterial artificial chromosome (BAC) libraries with polymerase chain reaction (PCR)-based markers is feasible provided that a multidimensional pooling strategy is implemented. Single nucleotide polymorphisms (SNPs) can be screened in multiplexed format, therefore this marker type lends itself particularly well for medium- to high-throughput applications. Combining the power of multiplex-PCR assays with a multidimensional pooling system may prove to be especially challenging in a polyploid genome. In polyploid genomes two classes of SNPs need to be distinguished, polymorphisms between accessions (intragenomic SNPs) and those differentiating between homoeologous genomes (intergenomic SNPs). We have assessed whether the highly parallel Illumina GoldenGate® Genotyping Assay is suitable for the screening of a BAC library of the polyploid Brassica napus genome. Results A multidimensional screening platform was developed for a Brassica napus BAC library which is composed of almost 83,000 clones. Intragenomic and intergenomic SNPs were included in Illumina’s GoldenGate® Genotyping Assay and both SNP classes were used successfully for screening of the multidimensional BAC pools of the Brassica napus library. An optimized scoring method is proposed which is especially valuable for SNP calling of intergenomic SNPs. Validation of the genotyping results by independent methods revealed a success of approximately 80% for the multiplex PCR-based screening regardless of whether intra- or intergenomic SNPs were evaluated. Conclusions Illumina’s GoldenGate® Genotyping Assay can be efficiently used for screening of multidimensional Brassica napus BAC pools. SNP calling was specifically tailored for the evaluation of BAC pool screening data. The developed scoring method can be implemented independently of plant reference samples. It is demonstrated that intergenomic SNPs represent a powerful tool for BAC library screening of a polyploid genome

  20. Effect of Bacillus spp. on seed germination of selected species of the genus Cuscuta (Convolvulaceae

    Directory of Open Access Journals (Sweden)

    Fatemeh Hadizadeh

    2014-04-01

    Full Text Available Species of the genus Cuscuta are annual angiospermic rootless and leafless (achlorophyllous parasitic plants. Bacillus is an example of PGPR bacteria exhibiting plant growth promoting activity. In this study the effects of bacterial suspension on germination of dodder’s seed has been determinated. Seeds of three Cuscuta species were collected from field for evaluating effects of three different Bacillus on its germination. Results show that seed germination of the C. monogyna and C. campestris is inhibited by all three bacterial species. Based on Tukey analysis, the highest inhibitory activity on seed germination of C. monogyna was shown with B. pumilus (68.88%; as well as C. campestris with B. megaterium (95.76% and B. pumilus (91.53%, whilst seed germination of C. europaea was almost identically inhibited by all three bacterial species. This paper reports the variable effects of Bacillus species on the seed germination of selected Cuscuta species.

  1. Do bacterial cell numbers follow a theoretical Poisson distribution? Comparison of experimentally obtained numbers of single cells with random number generation via computer simulation.

    Science.gov (United States)

    Koyama, Kento; Hokunan, Hidekazu; Hasegawa, Mayumi; Kawamura, Shuso; Koseki, Shigenobu

    2016-12-01

    We investigated a bacterial sample preparation procedure for single-cell studies. In the present study, we examined whether single bacterial cells obtained via 10-fold dilution followed a theoretical Poisson distribution. Four serotypes of Salmonella enterica, three serotypes of enterohaemorrhagic Escherichia coli and one serotype of Listeria monocytogenes were used as sample bacteria. An inoculum of each serotype was prepared via a 10-fold dilution series to obtain bacterial cell counts with mean values of one or two. To determine whether the experimentally obtained bacterial cell counts follow a theoretical Poisson distribution, a likelihood ratio test between the experimentally obtained cell counts and Poisson distribution which parameter estimated by maximum likelihood estimation (MLE) was conducted. The bacterial cell counts of each serotype sufficiently followed a Poisson distribution. Furthermore, to examine the validity of the parameters of Poisson distribution from experimentally obtained bacterial cell counts, we compared these with the parameters of a Poisson distribution that were estimated using random number generation via computer simulation. The Poisson distribution parameters experimentally obtained from bacterial cell counts were within the range of the parameters estimated using a computer simulation. These results demonstrate that the bacterial cell counts of each serotype obtained via 10-fold dilution followed a Poisson distribution. The fact that the frequency of bacterial cell counts follows a Poisson distribution at low number would be applied to some single-cell studies with a few bacterial cells. In particular, the procedure presented in this study enables us to develop an inactivation model at the single-cell level that can estimate the variability of survival bacterial numbers during the bacterial death process. Copyright © 2016 Elsevier Ltd. All rights reserved.

  2. Multiscale modeling of bacterial colonies: how pili mediate the dynamics of single cells and cellular aggregates

    Science.gov (United States)

    Pönisch, Wolfram; Weber, Christoph A.; Juckeland, Guido; Biais, Nicolas; Zaburdaev, Vasily

    2017-01-01

    Neisseria gonorrhoeae is the causative agent of one of the most common sexually transmitted diseases, gonorrhea. Over the past two decades there has been an alarming increase of reported gonorrhea cases where the bacteria were resistant to the most commonly used antibiotics thus prompting for alternative antimicrobial treatment strategies. The crucial step in this and many other bacterial infections is the formation of microcolonies, agglomerates consisting of up to several thousands of cells. The attachment and motility of cells on solid substrates as well as the cell-cell interactions are primarily mediated by type IV pili, long polymeric filaments protruding from the surface of cells. While the crucial role of pili in the assembly of microcolonies has been well recognized, the exact mechanisms of how they govern the formation and dynamics of microcolonies are still poorly understood. Here, we present a computational model of individual cells with explicit pili dynamics, force generation and pili-pili interactions. We employ the model to study a wide range of biological processes, such as the motility of individual cells on a surface, the heterogeneous cell motility within the large cell aggregates, and the merging dynamics and the self-assembly of microcolonies. The results of numerical simulations highlight the central role of pili generated forces in the formation of bacterial colonies and are in agreement with the available experimental observations. The model can quantify the behavior of multicellular bacterial colonies on biologically relevant temporal and spatial scales and can be easily adjusted to include the geometry and pili characteristics of various bacterial species. Ultimately, the combination of the microbiological experimental approach with the in silico model of bacterial colonies might provide new qualitative and quantitative insights on the development of bacterial infections and thus pave the way to new antimicrobial treatments.

  3. The Cooperative and Interdependent Roles of GerA, GerK, and Ynd in Germination of Bacillus licheniformis Spores.

    Science.gov (United States)

    Borch-Pedersen, Kristina; Lindbäck, Toril; Madslien, Elisabeth H; Kidd, Shani W; O'Sullivan, Kristin; Granum, Per Einar; Aspholm, Marina

    2016-07-15

    When nutrients are scarce, Bacillus species form metabolically dormant and extremely resistant spores that enable survival over long periods of time under conditions not permitting growth. The presence of specific nutrients triggers spore germination through interaction with germinant receptors located in the spore's inner membrane. Bacillus licheniformis is a biotechnologically important species, but it is also associated with food spoilage and food-borne disease. The B. licheniformis ATCC 14580/DSM13 genome exhibits three gerA family operons (gerA, gerK, and ynd) encoding germinant receptors. We show that spores of B. licheniformis germinate efficiently in response to a range of different single l-amino acid germinants, in addition to a weak germination response seen with d-glucose. Mutational analyses revealed that the GerA and Ynd germination receptors function cooperatively in triggering an efficient germination response with single l-amino acid germinants, whereas the GerK germination receptor is essential for germination with d-glucose. Mutant spores expressing only GerA and GerK or only Ynd and GerK show reduced or severely impaired germination responses, respectively, with single l-amino acid germinants. Neither GerA nor Ynd could function alone in stimulating spore germination. Together, these results functionally characterize the germination receptor operons present in B. licheniformis We demonstrate the overlapping germinant recognition patterns of the GerA and Ynd germination receptors and the cooperative functionalities between GerA, Ynd, and GerK in inducing germination. To ensure safe food production and durable foods, there is an obvious need for more knowledge on spore-forming bacteria. It is the process of spore germination that ultimately leads to food spoilage and food poisoning. Bacillus licheniformis is a biotechnologically important species that is also associated with food spoilage and food-borne disease. Despite its importance, the

  4. Seed dormancy and germination.

    Science.gov (United States)

    Penfield, Steven

    2017-09-11

    Reproduction is a critical time in plant life history. Therefore, genes affecting seed dormancy and germination are among those under strongest selection in natural plant populations. Germination terminates seed dispersal and thus influences the location and timing of plant growth. After seed shedding, germination can be prevented by a property known as seed dormancy. In practise, seeds are rarely either dormant or non-dormant, but seeds whose dormancy-inducing pathways are activated to higher levels will germinate in an ever-narrower range of environments. Thus, measurements of dormancy must always be accompanied by analysis of environmental contexts in which phenotypes or behaviours are described. At its simplest, dormancy can be imposed by the formation of a simple physical barrier around the seed through which gas exchange and the passage of water are prevented. Seeds featuring this so-called 'physical dormancy' often require either scarification or passage through an animal gut (replete with its associated digestive enzymes) to disrupt the barrier and permit germination. In other types of seeds with 'morphological dormancy' the embryo remains under-developed at maturity and a dormant phase exists as the embryo continues its growth post-shedding, eventually breaking through the surrounding tissues. By far, the majority of seeds exhibit 'physiological dormancy' - a quiescence program initiated by either the embryo or the surrounding endosperm tissues. Physiological dormancy uses germination-inhibiting hormones to prevent germination in the absence of the specific environmental triggers that promote germination. During and after germination, early seedling growth is supported by catabolism of stored reserves of protein, oil or starch accumulated during seed maturation. These reserves support cell expansion, chloroplast development and root growth until photoauxotrophic growth can be resumed. Crown Copyright © 2017. Published by Elsevier Ltd. All rights reserved.

  5. Testicular germinal tumors

    International Nuclear Information System (INIS)

    Fresco, R.

    2010-01-01

    This work is about diagnosis, treatment and monitoring of testicular germinal tumors. The presumed diagnosis is based in the anamnesis, clinical examination, testicular ultrasound and tumor markers. The definitive diagnosis is obtained through the inguinal radical orchidectomy

  6. Spatial distribution of bacterial communities on volumetric and planar anodes in single-chamber air-cathode microbial fuel cells

    KAUST Repository

    Vargas, Ignacio T.

    2013-05-29

    Pyrosequencing was used to characterize bacterial communities in air-cathode microbial fuel cells across a volumetric (graphite fiber brush) and a planar (carbon cloth) anode, where different physical and chemical gradients would be expected associated with the distance between anode location and the air cathode. As expected, the stable operational voltage and the coulombic efficiency (CE) were higher for the volumetric anode than the planar anode (0.57V and CE=22% vs. 0.51V and CE=12%). The genus Geobacter was the only known exoelectrogen among the observed dominant groups, comprising 57±4% of recovered sequences for the brush and 27±5% for the carbon-cloth anode. While the bacterial communities differed between the two anode materials, results showed that Geobacter spp. and other dominant bacterial groups were homogenously distributed across both planar and volumetric anodes. This lends support to previous community analysis interpretations based on a single biofilm sampling location in these systems. © 2013 Wiley Periodicals, Inc.

  7. The Motion of a Single Molecule, the Lambda-Receptor, in the Bacterial Outer Membrane

    DEFF Research Database (Denmark)

    Oddershede, Lene; Dreyer, Jakob Kisbye; Grego, Sonia

    2002-01-01

    Using optical tweezers and single particle tracking, we have revealed the motion of a single protein, the lambda-receptor, in the outer membrane of living Escherichia coli bacteria. We genetically modified the lambda-receptor placing a biotin on an extracellular site of the receptor in vivo....... The efficiency of this in vivo biotinylation is very low, thus enabling the attachment of a streptavidin-coated bead binding specifically to a single biotinylated lambda-receptor. The bead was used as a handle for the optical tweezers and as a marker for the single particle tracking routine. We propose a model...

  8. Germination phenology determines the propensity for facilitation and competition.

    Science.gov (United States)

    Leverett, Lindsay D

    2017-09-01

    A single plant can interact both positively and negatively with its neighbors through the processes of facilitation and competition, respectively. Much of the variation in the balance of facilitation and competition that individuals experience can be explained by the degree of physical stress and the sizes or ages of plants during the interaction. Germination phenology partly controls both of these factors, but its role in defining the facilitation-competition balance has not been explicitly considered. I performed an experiment in a population of the winter annual Arabidopsis thaliana (Brassicaceae) to test whether germinating during physically stressful periods leads to facilitation while germinating during periods that promote growth and reproduction leads to competition. I manipulated germination and neighbor presence across two years in order to quantify the effects of the local plant community on survival, fecundity, and total fitness as a function of germination phenology. Neighbors increased survival when germination occurred under conditions that were unsuitable for survival, but they reduced fecundity in germinants that were otherwise the most fecund. Later germination was associated with facilitation in the first year but competition in the second year. These episodes of facilitation and competition opposed each other, leading to no net effect of neighbors when averaged over all cohorts. These results indicate that variation in germination timing can explain some of the variation in the facilitation-competition balance in plant communities. © 2017 by the Ecological Society of America.

  9. Direct detection of single-nucleotide polymorphisms in bacterial DNA by SNPtrap

    DEFF Research Database (Denmark)

    Grønlund, Hugo Ahlm; Moen, Birgitte; Hoorfar, Jeffrey

    2011-01-01

    A major challenge with single-nucleotide polymorphism (SNP) fingerprinting of bacteria and higher organisms is the combination of genome-wide screenings with the potential of multiplexing and accurate SNP detection. Single-nucleotide extension by the minisequencing principle represents a technolo...

  10. Compatible bacterial mixture, tolerant to desiccation, improves maize plant growth.

    Science.gov (United States)

    Molina-Romero, Dalia; Baez, Antonino; Quintero-Hernández, Verónica; Castañeda-Lucio, Miguel; Fuentes-Ramírez, Luis Ernesto; Bustillos-Cristales, María Del Rocío; Rodríguez-Andrade, Osvaldo; Morales-García, Yolanda Elizabeth; Munive, Antonio; Muñoz-Rojas, Jesús

    2017-01-01

    Plant growth-promoting rhizobacteria (PGPR) increase plant growth and crop productivity. The inoculation of plants with a bacterial mixture (consortium) apparently provides greater benefits to plant growth than inoculation with a single bacterial strain. In the present work, a bacterial consortium was formulated containing four compatible and desiccation-tolerant strains with potential as PGPR. The formulation had one moderately (Pseudomonas putida KT2440) and three highly desiccation-tolerant (Sphingomonas sp. OF178, Azospirillum brasilense Sp7 and Acinetobacter sp. EMM02) strains. The four bacterial strains were able to adhere to seeds and colonize the rhizosphere of plants when applied in both mono-inoculation and multi-inoculation treatments, showing that they can also coexist without antagonistic effects in association with plants. The effects of the bacterial consortium on the growth of blue maize were evaluated. Seeds inoculated with either individual bacterial strains or the bacterial consortium were subjected to two experimental conditions before sowing: normal hydration or desiccation. In general, inoculation with the bacterial consortium increased the shoot and root dry weight, plant height and plant diameter compared to the non-inoculated control or mono-inoculation treatments. The bacterial consortium formulated in this work had greater benefits for blue maize plants even when the inoculated seeds underwent desiccation stress before germination, making this formulation attractive for future field applications.

  11. Compatible bacterial mixture, tolerant to desiccation, improves maize plant growth.

    Directory of Open Access Journals (Sweden)

    Dalia Molina-Romero

    Full Text Available Plant growth-promoting rhizobacteria (PGPR increase plant growth and crop productivity. The inoculation of plants with a bacterial mixture (consortium apparently provides greater benefits to plant growth than inoculation with a single bacterial strain. In the present work, a bacterial consortium was formulated containing four compatible and desiccation-tolerant strains with potential as PGPR. The formulation had one moderately (Pseudomonas putida KT2440 and three highly desiccation-tolerant (Sphingomonas sp. OF178, Azospirillum brasilense Sp7 and Acinetobacter sp. EMM02 strains. The four bacterial strains were able to adhere to seeds and colonize the rhizosphere of plants when applied in both mono-inoculation and multi-inoculation treatments, showing that they can also coexist without antagonistic effects in association with plants. The effects of the bacterial consortium on the growth of blue maize were evaluated. Seeds inoculated with either individual bacterial strains or the bacterial consortium were subjected to two experimental conditions before sowing: normal hydration or desiccation. In general, inoculation with the bacterial consortium increased the shoot and root dry weight, plant height and plant diameter compared to the non-inoculated control or mono-inoculation treatments. The bacterial consortium formulated in this work had greater benefits for blue maize plants even when the inoculated seeds underwent desiccation stress before germination, making this formulation attractive for future field applications.

  12. seed germination and seedlings growth

    African Journals Online (AJOL)

    STORAGESEVER

    2007-12-17

    Dec 17, 2007 ... The role of 20E in plant physiology including seed germination is not studied. ..... GA3, ABA and CKs on lettuce Lactuca sativa seed germination are ..... Practical uses for ecdysteroids in mammals and humans: an update. J.

  13. Tumors of germinal cells

    International Nuclear Information System (INIS)

    Plazas, Ricardo; Avila, Andres

    2002-01-01

    The tumors of germinal cells (TGC) are derived neoplasia of the primordial germinal cells that in the life embryonic migrant from the primitive central nervous system until being located in the gonads. Their cause is even unknown and they represent 95% of the testicular tumors. In them, the intention of the treatment is always healing and the diagnostic has improved thanks to the results of the handling multidisciplinary. The paper includes topics like their incidence and prevalence, epidemiology and pathology, clinic and diagnoses among other topics

  14. A Clostridium difficile alanine racemase affects spore germination and accommodates serine as a substrate.

    Science.gov (United States)

    Shrestha, Ritu; Lockless, Steve W; Sorg, Joseph A

    2017-06-23

    Clostridium difficile has become one of the most common bacterial pathogens in hospital-acquired infections in the United States. Although C. difficile is strictly anaerobic, it survives in aerobic environments and transmits between hosts via spores. C. difficile spore germination is triggered in response to certain bile acids and glycine. Although glycine is the most effective co-germinant, other amino acids can substitute with varying efficiencies. Of these, l-alanine is an effective co-germinant and is also a germinant for most bacterial spores. Many endospore-forming bacteria embed alanine racemases into their spore coats, and these enzymes are thought to convert the l-alanine germinant into d-alanine, a spore germination inhibitor. Although the C. difficile Alr2 racemase is the sixth most highly expressed gene during C. difficile spore formation, a previous study reported that Alr2 has little to no role in germination of C. difficile spores in rich medium. Here, we hypothesized that Alr2 could affect C. difficile l-alanine-induced spore germination in a defined medium. We found that alr2 mutant spores more readily germinate in response to l-alanine as a co-germinant. Surprisingly, d-alanine also functioned as a co-germinant. Moreover, we found that Alr2 could interconvert l- and d-serine and that Alr2 bound to l- and d-serine with ∼2-fold weaker affinity to that of l- and d-alanine. Finally, we demonstrate that l- and d-serine are also co-germinants for C. difficile spores. These results suggest that C. difficile spores can respond to a diverse set of amino acid co-germinants and reveal that Alr2 can accommodate serine as a substrate. © 2017 by The American Society for Biochemistry and Molecular Biology, Inc.

  15. Detection of a Reproducible, Single-Member Shift in Soil Bacterial Communities Exposed to Low Levels of Hydrogen▿

    Science.gov (United States)

    Osborne, Catherine A.; Peoples, Mark B.; Janssen, Peter H.

    2010-01-01

    Soil is exposed to hydrogen when symbiotic rhizobia in legume root nodules cannot recycle the hydrogen that is generated during nitrogen fixation. The hydrogen emitted is most likely taken up by free-living soil bacteria that use hydrogen as an energy source, though the bacteria that do this in situ remain unclear. In this study, we investigated the effect of hydrogen exposure on the bacteria of two different soils in a microcosm setup designed to simulate hydrogen-emitting root nodules. Although the size and overall composition of the soil bacterial community did not significantly alter after hydrogen exposure, one ribotype increased in relative abundance within each soil. This single-ribotype shift was identified by generating multiple terminal restriction fragment length polymorphism (T-RFLP) profiles of 16S rRNA genes from each soil sample, with gene sequence confirmation to identify terminal restriction fragments. The increased abundance of a single ribotype after hydrogen exposure, within an otherwise similar community, was found in replicate samples taken from each microcosm and was reproducible across replicate experiments. Similarly, only one member of the soil bacterial community increased in abundance in response to hydrogen exposure in soil surrounding the root nodules of field-grown soybean (Glycine max). The ribotypes that increased after hydrogen exposure in each soil system tested were all from known hydrogen-oxidizing lineages within the order Actinomycetales. We suggest that soil actinomycetes are important utilizers of hydrogen at relevant concentrations in soil and could be key contributors to soil's function as a sink in the global hydrogen cycle. PMID:20061453

  16. Klebsiella oxytoca '10mkr7\\' stimulates Striga suicidal germination in ...

    African Journals Online (AJOL)

    The Striga species are obligate root parasitic plants. Plant growth promoting rhizobacteria could enhance Striga suicidal germination. In screen-house studies we quantified the effect of bacterial inoculation with increasing maize plant density on the parasitic weed Striga hermonthica. The design used was a randomized ...

  17. Biochemical Changes Associated with Germinating Rice Grains and Germination Improvement

    Directory of Open Access Journals (Sweden)

    Subajiny VELUPPILLAI

    2009-09-01

    Full Text Available To determine biochemical changes during the germination of rice grains (Oryza sativa L. subsp. indica var. Mottaikaruppan and to improve germination rate using gibberellic acid and surfactants [sodium dodecyl sulfate (SDS (1.0 g/L and Triton-X−100 (1.0 mL/L], whole rice grains soaked in distilled water for 12 h at 30°C were germinated in the dark at 30°C for five days. The highest germination rate (77.1% was obtained on the 5th day. An increase in the content of reducing sugars from 7.3 to 58.1 mg/g DM (dry matter was observed from the 1st day of germination. Free amino acids and soluble protein contents increased to 3.69 and 5.29 mg/g DM, respectively on the 5th day of germination. Total protein content decreased from 100.5 to 91.0 g/kg DM during germination. Increases in amylolytic (1.1 to 190.0 U/g DM and proteolytic (0 to 0.12 U/g DM activities were observed during germination. Effects of different concentrations of gibberellic acid on the germination of rice grains were evaluated and 0.1 g/L was found to promote germination. When effects of gibberellic acid (0.1 g/L and surfactants were evaluated individually and together, higher germination rate was observed in the control experiment (grains germinated in distilled water, whereas giberellic acid and surfactants decreased the germination rate. Therefore, the flour obtained from the grains germinated for four days using distilled water to obtain high content of soluble materials and enzyme activities can be used in preparation of bakery items.

  18. Association mapping of soybean seed germination under salt stress.

    Science.gov (United States)

    Kan, Guizhen; Zhang, Wei; Yang, Wenming; Ma, Deyuan; Zhang, Dan; Hao, Derong; Hu, Zhenbin; Yu, Deyue

    2015-12-01

    Soil salinity is a serious threat to agriculture sustainability worldwide. Seed germination is a critical phase that ensures the successful establishment and productivity of soybeans in saline soils. However, little information is available regarding soybean salt tolerance at the germination stage. The objective of this study was to identify the genetic mechanisms of soybean seed germination under salt stress. One natural population consisting of 191 soybean landraces was used in this study. Soybean seeds produced in four environments were used to evaluate the salt tolerance at their germination stage. Using 1142 single-nucleotide polymorphisms (SNPs), the molecular markers associated with salt tolerance were detected by genome-wide association analysis. Eight SNP-trait associations and 13 suggestive SNP-trait associations were identified using a mixed linear model and the TASSEL 4.0 software. Eight SNPs or suggestive SNPs were co-associated with two salt tolerance indices, namely (1) the ratio of the germination index under salt conditions to the germination index under no-salt conditions (ST-GI) and (2) the ratio of the germination rate under salt conditions to the germination rate under no-salt conditions (ST-GR). One SNP (BARC-021347-04042) was significantly associated with these two traits (ST-GI and ST-GR). In addition, nine possible candidate genes were located in or near the genetic region where the above markers were mapped. Of these, five genes, Glyma08g12400.1, Glyma08g09730.1, Glyma18g47140.1, Glyma09g00460.1, and Glyma09g00490.3, were verified in response to salt stress at the germination stage. The SNPs detected could facilitate a better understanding of the genetic basis of soybean salt tolerance at the germination stage, and the marker BARC-021347-04042 could contribute to future breeding for soybean salt tolerance by marker-assisted selection.

  19. Bacterial microbiota of Kazakhstan cheese revealed by single molecule real time (SMRT) sequencing and its comparison with Belgian, Kalmykian and Italian artisanal cheeses.

    Science.gov (United States)

    Li, Jing; Zheng, Yi; Xu, Haiyan; Xi, Xiaoxia; Hou, Qiangchuan; Feng, Shuzhen; Wuri, Laga; Bian, Yanfei; Yu, Zhongjie; Kwok, Lai-Yu; Sun, Zhihong; Sun, Tiansong

    2017-01-09

    In Kazakhstan, traditional artisanal cheeses have a long history and are widely consumed. The unique characteristics of local artisanal cheeses are almost completely preserved. However, their microbial communities have rarely been reported. The current study firstly generated the Single Molecule, Real-Time (SMRT) sequencing bacterial diversity profiles of 6 traditional artisanal cheese samples of Kazakhstan origin, followed by comparatively analyzed the microbiota composition between the current dataset and those from cheeses originated from Belgium, Russian Republic of Kalmykia (Kalmykia) and Italy. Across the Kazakhstan cheese samples, a total of 238 bacterial species belonging to 14 phyla and 140 genera were identified. Lactococcus lactis (28.93%), Lactobacillus helveticus (26.43%), Streptococcus thermophilus (12.18%) and Lactobacillus delbrueckii (12.15%) were the dominant bacterial species for these samples. To further evaluate the cheese bacterial diversity of Kazakhstan cheeses in comparison with those from other geographic origins, 16S rRNA datasets of 36 artisanal cheeses from Belgium, Russian Republic of Kalmykia (Kalmykia) and Italy were retrieved from public databases. The cheese bacterial microbiota communities were largely different across sample origins. By principal coordinate analysis (PCoA) and multivariate analysis of variance (MANOVA), the structure of the Kazakhstan artisanal cheese samples was found to be different from those of the other geographic origins. Furthermore, the redundancy analysis (RDA) identified 16 bacterial OTUs as the key variables responsible for such microbiota structural difference. Our results together suggest that the diversity of bacterial communities in different groups is stratified by geographic region. This study does not only provide novel information on the bacterial microbiota of traditional artisanal cheese of Kazakhstan at species level, but also interesting insights into the bacterial diversity of artisanal

  20. Silencing of a Germin-Like Protein Gene (CchGLP in Geminivirus-Resistant Pepper (Capsicum chinense Jacq. BG-3821 Increases Susceptibility to Single and Mixed Infections by Geminiviruses PHYVV and PepGMV

    Directory of Open Access Journals (Sweden)

    Laura Mejía-Teniente

    2015-11-01

    Full Text Available Germin-like proteins (GLPs are encoded by a family of genes found in all plants, and in terms of function, the GLPs are implicated in the response of plants to biotic and abiotic stresses. CchGLP is a gene encoding a GLP identified in a geminivirus-resistant Capsicum chinense Jacq accession named BG-3821, and it is important in geminivirus resistance when transferred to susceptible tobacco in transgenic experiments. To characterize the role of this GLP in geminivirus resistance in the original accession from which this gene was identified, this work aimed at demonstrating the possible role of CchGLP in resistance to geminiviruses in Capsicum chinense Jacq. BG-3821. Virus-induced gene silencing studies using a geminiviral vector based in PHYVV component A, displaying that silencing of CchGLP in accession BG-3821, increased susceptibility to geminivirus single and mixed infections. These results suggested that CchGLP is an important factor for geminivirus resistance in C. chinense BG-3821 accession.

  1. Silencing of a Germin-Like Protein Gene (CchGLP) in Geminivirus-Resistant Pepper (Capsicum chinense Jacq.) BG-3821 Increases Susceptibility to Single and Mixed Infections by Geminiviruses PHYVV and PepGMV.

    Science.gov (United States)

    Mejía-Teniente, Laura; Joaquin-Ramos, Ahuizolt de Jesús; Torres-Pacheco, Irineo; Rivera-Bustamante, Rafael F; Guevara-Olvera, Lorenzo; Rico-García, Enrique; Guevara-Gonzalez, Ramon G

    2015-11-25

    Germin-like proteins (GLPs) are encoded by a family of genes found in all plants, and in terms of function, the GLPs are implicated in the response of plants to biotic and abiotic stresses. CchGLP is a gene encoding a GLP identified in a geminivirus-resistant Capsicum chinense Jacq accession named BG-3821, and it is important in geminivirus resistance when transferred to susceptible tobacco in transgenic experiments. To characterize the role of this GLP in geminivirus resistance in the original accession from which this gene was identified, this work aimed at demonstrating the possible role of CchGLP in resistance to geminiviruses in Capsicum chinense Jacq. BG-3821. Virus-induced gene silencing studies using a geminiviral vector based in PHYVV component A, displaying that silencing of CchGLP in accession BG-3821, increased susceptibility to geminivirus single and mixed infections. These results suggested that CchGLP is an important factor for geminivirus resistance in C. chinense BG-3821 accession.

  2. Response of single bacterial cells to stress gives rise to complex history dependence at the population level

    Science.gov (United States)

    Mathis, Roland; Ackermann, Martin

    2016-01-01

    Most bacteria live in ever-changing environments where periods of stress are common. One fundamental question is whether individual bacterial cells have an increased tolerance to stress if they recently have been exposed to lower levels of the same stressor. To address this question, we worked with the bacterium Caulobacter crescentus and asked whether exposure to a moderate concentration of sodium chloride would affect survival during later exposure to a higher concentration. We found that the effects measured at the population level depended in a surprising and complex way on the time interval between the two exposure events: The effect of the first exposure on survival of the second exposure was positive for some time intervals but negative for others. We hypothesized that the complex pattern of history dependence at the population level was a consequence of the responses of individual cells to sodium chloride that we observed: (i) exposure to moderate concentrations of sodium chloride caused delays in cell division and led to cell-cycle synchronization, and (ii) whether a bacterium would survive subsequent exposure to higher concentrations was dependent on the cell-cycle state. Using computational modeling, we demonstrated that indeed the combination of these two effects could explain the complex patterns of history dependence observed at the population level. Our insight into how the behavior of single cells scales up to processes at the population level provides a perspective on how organisms operate in dynamic environments with fluctuating stress exposure. PMID:26960998

  3. Third-Generation Cephalosporin-Resistant Spontaneous Bacterial Peritonitis: A single-Centre Experience and Summary of Existing Studies

    Directory of Open Access Journals (Sweden)

    Jennifer Chaulk

    2014-01-01

    Full Text Available BACKGROUND: Spontaneous bacterial peritonitis (SBP is the most prevalent bacterial infection in patients with cirrhosis. Although studies from Europe have reported significant rates of resistance to third-generation cephalosporins, there are limited SBP-specific data from centres in North America.

  4. Germination and seedling establishment in orchids: a complex of requirements.

    Science.gov (United States)

    Rasmussen, Hanne N; Dixon, Kingsley W; Jersáková, Jana; Těšitelová, Tamara

    2015-09-01

    Seedling recruitment is essential to the sustainability of any plant population. Due to the minute nature of seeds and early-stage seedlings, orchid germination in situ was for a long time practically impossible to observe, creating an obstacle towards understanding seedling site requirements and fluctuations in orchid populations. The introduction of seed packet techniques for sowing and retrieval in natural sites has brought with it important insights, but many aspects of orchid seed and germination biology remain largely unexplored. The germination niche for orchids is extremely complex, because it is defined by requirements not only for seed lodging and germination, but also for presence of a fungal host and its substrate. A mycobiont that the seedling can parasitize is considered an essential element, and a great diversity of Basidiomycota and Ascomycota have now been identified for their role in orchid seed germination, with fungi identifiable as imperfect Rhizoctonia species predominating. Specificity patterns vary from orchid species employing a single fungal lineage to species associating individually with a limited selection of distantly related fungi. A suitable organic carbon source for the mycobiont constitutes another key requirement. Orchid germination also relies on factors that generally influence the success of plant seeds, both abiotic, such as light/shade, moisture, substrate chemistry and texture, and biotic, such as competitors and antagonists. Complexity is furthermore increased when these factors influence seeds/seedling, fungi and fungal substrate differentially. A better understanding of germination and seedling establishment is needed for conservation of orchid populations. Due to the obligate association with a mycobiont, the germination niches in orchid species are extremely complex and varied. Microsites suitable for germination can be small and transient, and direct observation is difficult. An experimental approach using several

  5. Changes in germination characteristics and seedling growth ...

    African Journals Online (AJOL)

    Changes in germination characteristics and seedling growth between storage ... for up to 1 year and the second group was used for un-stored germination test. ... seed germination performance without loss of longevity of tall fescue species, ...

  6. Germination of Afrocarpus usambarensis and Podocarpus ...

    African Journals Online (AJOL)

    ACSS

    farm planting. Seed germination of .... 235. Germination of Afrocarpus usambarensis and Podocarpus milanjianus seeds. Table 2. Mean seed germination of A. usambarensis and P. milanjianus. Species .... National Forestry Authority and District.

  7. Influence of type-I fimbriae and fluid shear stress on bacterial behavior and multicellular architecture of early Escherichia coli biofilms at single-cell resolution.

    Science.gov (United States)

    Wang, Liyun; Keatch, Robert; Zhao, Qi; Wright, John A; Bryant, Clare E; Redmann, Anna L; Terentjev, Eugene M

    2018-01-12

    Biofilm formation on abiotic surfaces in food and medical industry can cause severe contamination and infection, yet how biological and physical factors determine cellular architecture of early biofilms and bacterial behavior of the constituent cells remains largely unknown. In this study we examine the specific role of type-I fimbriae in nascent stages of biofilm formation and the response of micro-colonies to environmental flow shear at single-cell resolution. The results show that type-I fimbriae are not required for reversible adhesion from plankton, but critical for irreversible adhesion of Escherichia coli ( E.coli ) MG1655 forming biofilms on polyethylene terephthalate (PET) surfaces. Besides establishing a firm cell-surface contact, the irreversible adhesion seems necessary to initiate the proliferation of E.coli on the surface. After application of shear stress, bacterial retention is dominated by the 3D architecture of colonies independent of the population and the multi-layered structure could protect the embedded cells from being insulted by fluid shear, while cell membrane permeability mainly depends on the biofilm population and the duration time of the shear stress. Importance Bacterial biofilms could lead to severe contamination problems in medical devices and food processing equipment. However, biofilms are usually studied at a rough macroscopic level, thus little is known about how individual bacterial behavior within biofilms and multicellular architecture are influenced by bacterial appendages (e.g. pili/fimbriae) and environmental factors during early biofilm formation. We apply Confocal Laser Scanning Microscopy (CLSM) to visualize E.coli micro-colonies at single-cell resolution. Our findings suggest that type-I fimbriae are vital to the initiation of bacterial proliferation on surfaces and that the responses of biofilm architecture and cell membrane permeability of constituent bacteria to fluid shear stress are different, which are

  8. Applying meta-pathway analyses through metagenomics to identify the functional properties of the major bacterial communities of a single spontaneous cocoa bean fermentation process sample.

    Science.gov (United States)

    Illeghems, Koen; Weckx, Stefan; De Vuyst, Luc

    2015-09-01

    A high-resolution functional metagenomic analysis of a representative single sample of a Brazilian spontaneous cocoa bean fermentation process was carried out to gain insight into its bacterial community functioning. By reconstruction of microbial meta-pathways based on metagenomic data, the current knowledge about the metabolic capabilities of bacterial members involved in the cocoa bean fermentation ecosystem was extended. Functional meta-pathway analysis revealed the distribution of the metabolic pathways between the bacterial members involved. The metabolic capabilities of the lactic acid bacteria present were most associated with the heterolactic fermentation and citrate assimilation pathways. The role of Enterobacteriaceae in the conversion of substrates was shown through the use of the mixed-acid fermentation and methylglyoxal detoxification pathways. Furthermore, several other potential functional roles for Enterobacteriaceae were indicated, such as pectinolysis and citrate assimilation. Concerning acetic acid bacteria, metabolic pathways were partially reconstructed, in particular those related to responses toward stress, explaining their metabolic activities during cocoa bean fermentation processes. Further, the in-depth metagenomic analysis unveiled functionalities involved in bacterial competitiveness, such as the occurrence of CRISPRs and potential bacteriocin production. Finally, comparative analysis of the metagenomic data with bacterial genomes of cocoa bean fermentation isolates revealed the applicability of the selected strains as functional starter cultures. Copyright © 2015 Elsevier Ltd. All rights reserved.

  9. Evaluation of a Single Procedure Allowing the Isolation of Enteropathogenic Yersinia along with Other Bacterial Enteropathogens from Human Stools

    Science.gov (United States)

    Savin, Cyril; Leclercq, Alexandre; Carniel, Elisabeth

    2012-01-01

    Enteropathogenic Yersinia are among the most frequent agents of human diarrhea in temperate and cold countries. However, the incidence of yersiniosis is largely underestimated because of the peculiar growth characteristics of pathogenic Yersinia, which make their isolation from poly-contaminated samples difficult. The use of specific procedures for Yersinia isolation is required, but is expensive and time consuming, and therefore is not systematically performed in clinical pathology laboratories. A means to circumvent this problem would be to use a single procedure for the isolation of all bacterial enteropathogens. Since the Statens Serum Institut enteric medium (SSI) has been reported to allow the growth at 37°C of most Gram-negative bacteria, including Yersinia, our study aimed at evaluating its performances for Yersinia isolation, as compared to the commonly used Yersinia-specific semi-selective Cefsulodin-Irgasan-Novobiocin medium (CIN) incubated at 28°C. Our results show that Yersinia pseudotuberculosis growth was strongly inhibited on SSI at 37°C, and therefore that this medium is not suitable for the isolation of this species. All Yersinia enterocolitica strains tested grew on SSI, while some non-pathogenic Yersinia species were inhibited. The morphology of Y. enterocolitica colonies on SSI allowed their differentiation from various other Gram-negative bacteria commonly isolated from stool samples. However, in artificially contaminated human stools, the recovery of Y. enterocolitica colonies on SSI at 37°C was difficult and was 3 logs less sensitive than on CIN at 28°C. Therefore, despite its limitations, the use of a specific procedure (CIN incubated at 28°C) is still required for an efficient isolation of enteropathogenic Yersinia from stools. PMID:22911756

  10. Germination and storage of pollen

    NARCIS (Netherlands)

    Visser, T.

    1955-01-01

    Germination of pear pollen markedly improved when boric acid was added to the medium. The pollen was more sensitive to boron in water than in 10 % sugar solution. Supplying weak solutions of boron to pear branches before flowering resulted in a good germination of the pollen in sugar solution

  11. Microorganisms control during processing of germinated brown rice

    International Nuclear Information System (INIS)

    Suzuki, K.; Maekawa, T.

    1999-01-01

    In order to limit the growth of microorganisms during processing of germinated brown rice (GBR), three kinds of operations for sanitation control were investigated. For a surface-disinfection treatment of brown rice, soaking in 1% of sodium hypochlorite for 10min. and 0.1% of calcium preparation solutions for 10min. at 30°C, resulted in 2log decrease by aerobic plate count in culture water after 1h of the germination processing. Soaking in 10% of sodium hypochlorite for 10min. and 1% of calcium preparation solutions for 10min at 30°C were found to inhibit germination, respectively. During the germination processing, including aeration stage and non-aeration stage, continuous ultraviolet irradiation on the culture water in the water tank resulted in limited bacterial growth in culture water below 102CFU/ml by aerobic plate count. Moreover, the turbidity of the culture water was improved by filtration of the stored water using activated carbon-hollow fiber filter. The filtration by activated carbon-hollow fiber filter during the germination processing was an effective method to eliminate microorganisms and contamination factor during GBR production. It also improved the efficiency of ultraviolet irradiation effect on the culture water

  12. Effects of High Pressure on Bacillus licheniformis Spore Germination and Inactivation.

    Science.gov (United States)

    Borch-Pedersen, Kristina; Mellegård, Hilde; Reineke, Kai; Boysen, Preben; Sevenich, Robert; Lindbäck, Toril; Aspholm, Marina

    2017-07-15

    Bacillus and Clostridium species form spores, which pose a challenge to the food industry due to their ubiquitous nature and extreme resistance. Pressurization at 300 MPa likely triggers germination by opening dipicolinic acid (DPA) channels present in the inner membrane of the spores. In this work, we expose spores of Bacillus licheniformis , a species associated with food spoilage and occasionally with food poisoning, to high pressure (HP) for holding times of up to 2 h. By using mutant spores lacking one or several GRs, we dissect the roles of the GerA, Ynd, and GerK GRs in moderately HP (mHP; 150 MPa)-induced spore germination. We show that Ynd alone is sufficient for efficient mHP-induced spore germination. GerK also triggers germination with mHP, although at a reduced germination rate compared to that of Ynd. GerA stimulates mHP-induced germination but only in the presence of either the intact GerK or Ynd GR. These results suggests that the effectiveness of the individual GRs in mHP-induced germination differs from their effectiveness in nutrient-induced germination, where GerA plays an essential role. In contrast to Bacillus subtilis spores, treatment with very HP (vHP) of 550 MPa at 37°C did not promote effective germination of B. licheniformis spores. However, treatment with vHP in combination with elevated temperatures (60°C) gave a synergistic effect on spore germination and inactivation. Together, these results provide novel insights into how HP affects B. licheniformis spore germination and inactivation and the role of individual GRs in this process. IMPORTANCE Bacterial spores are inherently resistant to food-processing regimes, such as high-temperature short-time pasteurization, and may therefore compromise food durability and safety. The induction of spore germination facilitates subsequent inactivation by gentler processing conditions that maintain the sensory and nutritional qualities of the food. High-pressure (HP) processing is a nonthermal

  13. Spatial distribution of bacterial communities on volumetric and planar anodes in single-chamber air-cathode microbial fuel cells

    KAUST Repository

    Vargas, Ignacio T.; Albert, Istvan U.; Regan, John M.

    2013-01-01

    Pyrosequencing was used to characterize bacterial communities in air-cathode microbial fuel cells across a volumetric (graphite fiber brush) and a planar (carbon cloth) anode, where different physical and chemical gradients would be expected

  14. Spore Heat Activation Requirements and Germination Responses Correlate with Sequences of Germinant Receptors and with the Presence of a Specific spoVA2mob Operon in Foodborne Strains of Bacillus subtilis.

    Science.gov (United States)

    Krawczyk, Antonina O; de Jong, Anne; Omony, Jimmy; Holsappel, Siger; Wells-Bennik, Marjon H J; Kuipers, Oscar P; Eijlander, Robyn T

    2017-04-01

    Spore heat resistance, germination, and outgrowth are problematic bacterial properties compromising food safety and quality. Large interstrain variation in these properties makes prediction and control of spore behavior challenging. High-level heat resistance and slow germination of spores of some natural Bacillus subtilis isolates, encountered in foods, have been attributed to the occurrence of the spoVA 2mob operon carried on the Tn 1546 transposon. In this study, we further investigate the correlation between the presence of this operon in high-level-heat-resistant spores and their germination efficiencies before and after exposure to various sublethal heat treatments (heat activation, or HA), which are known to significantly improve spore responses to nutrient germinants. We show that high-level-heat-resistant spores harboring spoVA 2mob required higher HA temperatures for efficient germination than spores lacking spoVA 2mob The optimal spore HA requirements additionally depended on the nutrients used to trigger germination, l-alanine (l-Ala), or a mixture of l-asparagine, d-glucose, d-fructose, and K + (AGFK). The distinct HA requirements of these two spore germination pathways are likely related to differences in properties of specific germinant receptors. Moreover, spores that germinated inefficiently in AGFK contained specific changes in sequences of the GerB and GerK germinant receptors, which are involved in this germination response. In contrast, no relation was found between transcription levels of main germination genes and spore germination phenotypes. The findings presented in this study have great implications for practices in the food industry, where heat treatments are commonly used to inactivate pathogenic and spoilage microbes, including bacterial spore formers. IMPORTANCE This study describes a strong variation in spore germination capacities and requirements for a heat activation treatment, i.e., an exposure to sublethal heat that increases

  15. Reduced seed germination in Arabidopsis over-expressing SWI/SNF2 ATPase genes.

    Science.gov (United States)

    Leeggangers, Hendrika A C F; Folta, Adam; Muras, Aleksandra; Nap, Jan-Peter; Mlynarova, Ludmila

    2015-02-01

    In the life of flowering plants, seed germination is a critical step to ensure survival into the next generation. Generally the seed prior to germination has been in a dormant state with a low rate of metabolism. In the transition from a dormant seed to a germinating seed, various epigenetic mechanisms play a regulatory role. Here, we demonstrate that the over-expression of chromatin remodeling ATPase genes (AtCHR12 or AtCHR23) reduced the frequency of seed germination in Arabidopsis thaliana up to 30% relative to the wild-type seeds. On the other hand, single loss-of-function mutations of the two genes did not affect seed germination. The reduction of germination in over-expressing mutants was more pronounced in stress conditions (salt or high temperature), showing the impact of the environment. Reduced germinations upon over-expression coincided with increased transcript levels of seed maturation genes and with reduced degradation of their mRNAs stored in dry seeds. Our results indicate that repression of AtCHR12/23 gene expression in germinating wild-type Arabidopsis seeds is required for full germination. This establishes a functional link between chromatin modifiers and regulatory networks towards seed maturation and germination. © 2014 Scandinavian Plant Physiology Society.

  16. Portable Diagnostics and Rapid Germination

    Energy Technology Data Exchange (ETDEWEB)

    Dunn, Zachary Spencer [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)

    2016-12-01

    In the Bioenergy and Defense Department of Sandia National Laboratories, characterization of the BaDx (Bacillus anthracis diagnostic cartridge) was performed and rapid germination chemistry was investigated. BaDx was tested with complex sample matrixes inoculated with Bacillus anthracis, and the trials proved that BaDx will detect Bacillus anthracis in a variety of the medium, such as dirt, serum, blood, milk, and horse fluids. The dimensions of the device were altered to accommodate an E. coli or Listeria lateral flow immunoassay, and using a laser printer, BaDx devices were manufactured to identify E. coli and Listeria. Initial testing with E. coli versions of BaDx indicate that the device will be viable as a portable diagnostic cartridge. The device would be more effective with faster bacteria germination; hence studies were performed the use of rapid germination chemistry. Trials with calcium dipicolinic acid displayed increased cell germination, as shown by control studies using a microplate reader. Upon lyophilization the rapid germination chemistry failed to change growth patterns, indicating that the calcium dipicolinic acid was not solubilized under the conditions tested. Although incompatible with the portable diagnostic device, the experiments proved that the rapid germination chemistry was effective in increasing cell germination.

  17. 7 CFR 201.63 - Germination.

    Science.gov (United States)

    2010-01-01

    ... 7 Agriculture 3 2010-01-01 2010-01-01 false Germination. 201.63 Section 201.63 Agriculture... REGULATIONS Tolerances § 201.63 Germination. The following tolerances are applicable to the percentage of germination and also to the sum of the germination plus the hard seed when 400 or more seeds are tested. Mean...

  18. The orphan germinant receptor protein GerXAO (but not GerX3b) is essential for L-alanine induced germination in Clostridium botulinum Group II.

    Science.gov (United States)

    Brunt, Jason; Carter, Andrew T; Pye, Hannah V; Peck, Michael W

    2018-05-04

    Clostridium botulinum is an anaerobic spore forming bacterium that produces the potent botulinum neurotoxin that causes a severe and fatal neuro-paralytic disease of humans and animals (botulism). C. botulinum Group II is a psychrotrophic saccharolytic bacterium that forms spores of moderate heat resistance and is a particular hazard in minimally heated chilled foods. Spore germination is a fundamental process that allows the spore to transition to a vegetative cell and typically involves a germinant receptor (GR) that responds to environmental signals. Analysis of C. botulinum Group II genomes shows they contain a single GR cluster (gerX3b), and an additional single gerA subunit (gerXAO). Spores of C. botulinum Group II strain Eklund 17B germinated in response to the addition of L-alanine, but did not germinate following the addition of exogenous Ca 2+ -DPA. Insertional inactivation experiments in this strain unexpectedly revealed that the orphan GR GerXAO is essential for L-alanine stimulated germination. GerX3bA and GerX3bC affected the germination rate but were unable to induce germination in the absence of GerXAO. No role could be identified for GerX3bB. This is the first study to identify the functional germination receptor of C. botulinum Group II.

  19. Seed Germination of selected Taxa from Kachchh Desert, India

    Directory of Open Access Journals (Sweden)

    Vinay Madhukar RAOLE

    2010-06-01

    Full Text Available The district of Kachchh contains many culturally important plants. However, their conservation status is little known due to direct and indirect human activities. This study was undertaken with the aim of contributing to the conservation of the native species of these semi-arid regions through germination trials under laboratory conditions. Mature fruits of ten selected species were collected randomly from the known habitats to obtain viable seeds. These seeds were pre-treated with growth regulators singly or in combination after acid scarification or without scarification. Seeds were found to be dormant due to presence of thick seed coat or due to low level of endogenous hormonal level. Most of these seeds required different storage period to mature. Only seeds of Capparis cartilaginea germinated without treatment while the other species required treatments. Addition of growth regulators has enhanced seed germination in few taxa singly and in some plant cases in combination.

  20. Whole genome sequencing options for bacterial strain typing and epidemiologic analysis based on single nucleotide polymorphism versus gene-by-gene-based approaches.

    Science.gov (United States)

    Schürch, A C; Arredondo-Alonso, S; Willems, R J L; Goering, R V

    2018-04-01

    Whole genome sequence (WGS)-based strain typing finds increasing use in the epidemiologic analysis of bacterial pathogens in both public health as well as more localized infection control settings. This minireview describes methodologic approaches that have been explored for WGS-based epidemiologic analysis and considers the challenges and pitfalls of data interpretation. Personal collection of relevant publications. When applying WGS to study the molecular epidemiology of bacterial pathogens, genomic variability between strains is translated into measures of distance by determining single nucleotide polymorphisms in core genome alignments or by indexing allelic variation in hundreds to thousands of core genes, assigning types to unique allelic profiles. Interpreting isolate relatedness from these distances is highly organism specific, and attempts to establish species-specific cutoffs are unlikely to be generally applicable. In cases where single nucleotide polymorphism or core gene typing do not provide the resolution necessary for accurate assessment of the epidemiology of bacterial pathogens, inclusion of accessory gene or plasmid sequences may provide the additional required discrimination. As with all epidemiologic analysis, realizing the full potential of the revolutionary advances in WGS-based approaches requires understanding and dealing with issues related to the fundamental steps of data generation and interpretation. Copyright © 2018 The Authors. Published by Elsevier Ltd.. All rights reserved.

  1. Germination of Aspergillus niger conidia

    OpenAIRE

    Hayer, Kimran

    2014-01-01

    Aspergillus niger is a black-spored filamentous fungus that forms asexual spores called conidospores (‘conidia’). Germination of conidia, leading to the formation of hyphae, is initiated by conidial swelling and mobilisation of endogenous carbon and energy stores, followed by polarisation and emergence of a hyphal germ tube. These morphological and biochemical changes which define the model of germination have been studied with the aim of understanding how conidia sense and utilise different...

  2. Conformational Diversity of Single-Stranded DNA from Bacterial Repetitive Extragenic Palindromes: Implications for the DNA Recognition Elements of Transposases

    Czech Academy of Sciences Publication Activity Database

    Charnavets, Tatsiana; Nunvář, Jaroslav; Nečasová, Iva; Voelker, J.; Breslauer, K.J.; Schneider, Bohdan

    2015-01-01

    Roč. 103, č. 10 (2015), s. 585-596 ISSN 0006-3525 R&D Projects: GA MŠk(CZ) ED1.1.00/02.0109; GA ČR GAP305/12/1801; GA MŠk(CZ) EE2.3.30.0020 Institutional support: RVO:86652036 Keywords : bacterial repetitive extragenic palindromes (REP) * circular dichroism spectroscopy * REP associated tyrosine transposases (RAYTs) Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 2.248, year: 2015

  3. Hot topic: Bovine milk samples yielding negative or nonspecific results in bacterial culturing--the possible role of PCR-single strand conformation polymorphism in mastitis diagnosis.

    Science.gov (United States)

    Schwaiger, K; Wimmer, M; Huber-Schlenstedt, R; Fehlings, K; Hölzel, C S; Bauer, J

    2012-01-01

    A large proportion of mastitis milk samples yield negative or nonspecific results (i.e., no mastitis pathogen can be identified) in bacterial culturing. Therefore, the culture-independent PCR-single strand conformation polymorphism method was applied to the investigation of bovine mastitis milk samples. In addition to the known mastitis pathogens, the method was suitable for the detection of fastidious bacteria such as Mycoplasma spp., which are often missed by conventional culturing methods. The detection of Helcococcus ovis in 4 samples might indicate an involvement of this species in pathogenesis of bovine mastitis. In conclusion, PCR-single-strand conformation polymorphism is a promising tool for gaining new insights into the bacteriological etiology of mastitis. Copyright © 2012 American Dairy Science Association. Published by Elsevier Inc. All rights reserved.

  4. Stabilization of bacterially expressed erythropoietin by single site-specific introduction of short branched PEG chains at naturally occurring glycosylation sites.

    Science.gov (United States)

    Hoffmann, E; Streichert, K; Nischan, N; Seitz, C; Brunner, T; Schwagerus, S; Hackenberger, C P R; Rubini, M

    2016-05-24

    The covalent attachment of polyethylene glycol (PEG) to therapeutic proteins can improve their physicochemical properties. In this work we utilized the non-natural amino acid p-azidophenylalanine (pAzF) in combination with the chemoselective Staudinger-phosphite reaction to install branched PEG chains to recombinant unglycosylated erythropoietin (EPO) at each single naturally occurring glycosylation site. PEGylation with two short 750 or 2000 Da PEG units at positions 24, 38, or 83 significantly decreased unspecific aggregation and proteolytic degradation while biological activity in vitro was preserved or even increased in comparison to full-glycosylated EPO. This site-specific bioconjugation approach permits to analyse the impact of PEGylation at single positions. These results represent an important step towards the engineering of site-specifically modified EPO variants from bacterial expression with increased therapeutic efficacy.

  5. Ethylene, seed germination, and epinasty.

    Science.gov (United States)

    Stewart, E R; Freebairn, H T

    1969-07-01

    Ethylene activity in lettuce seed (Lactuca satina) germination and tomato (Lycopersicon esculentum) petiole epinasty has been characterized by using heat to inhibit ethylene synthesis. This procedure enabled a separation of the production of ethylene from the effect of ethylene. Ethylene was required in tomato petioles to produce the epinastic response and auxin was found to be active in producing epinasty through a stimulation of ethylene synthesis with the resulting ethylene being responsible for the epinasty. In the same manner, it was shown that gibberellic acid stimulated ethylene synthesis in lettuce seeds. The ethylene produced then in turn stimulated the seeds to germinate. It was hypothesized that ethylene was the intermediate which caused epinasty or seed germination. Auxin and gibberellin primarily induced their response by stimulating ethylene production.

  6. COMPARATIVE GERMINATION RESPONSES OF COWPEA AND ...

    African Journals Online (AJOL)

    iya beji

    inadequate soil moisture (25%) in both cowpea and maize with greater effect on ... Of all factors controlling productivity, seed germination and vigour are pre- .... depth and date of first irrigation on seed cane germination of two commercial.

  7. Describing phytotoxic effects on cumulative germination

    OpenAIRE

    Dias, L.S.

    2001-01-01

    Phytotoxic studies strongly depend on evaluation of germination responses, which implies the need for adequate procedures to account for distinct aspects of the germinative process. For this, indices, comparisons among treatments at various times, and model fitting have been proposed. The objective of this work is to compare the three approaches and select the one providing greater insight and precision. Speed of germination, speed of accumulated germination, the coefficient of the rate of ge...

  8. A Clostridium difficile-Specific, Gel-Forming Protein Required for Optimal Spore Germination

    Directory of Open Access Journals (Sweden)

    M. Lauren Donnelly

    2017-01-01

    Full Text Available Clostridium difficile is a Gram-positive spore-forming obligate anaerobe that is a leading cause of antibiotic-associated diarrhea worldwide. In order for C. difficile to initiate infection, its aerotolerant spore form must germinate in the gut of mammalian hosts. While almost all spore-forming organisms use transmembrane germinant receptors to trigger germination, C. difficile uses the pseudoprotease CspC to sense bile salt germinants. CspC activates the related subtilisin-like protease CspB, which then proteolytically activates the cortex hydrolase SleC. Activated SleC degrades the protective spore cortex layer, a step that is essential for germination to proceed. Since CspC incorporation into spores also depends on CspA, a related pseudoprotease domain, Csp family proteins play a critical role in germination. However, how Csps are incorporated into spores remains unknown. In this study, we demonstrate that incorporation of the CspC, CspB, and CspA germination regulators into spores depends on CD0311 (renamed GerG, a previously uncharacterized hypothetical protein. The reduced levels of Csps in gerG spores correlate with reduced responsiveness to bile salt germinants and increased germination heterogeneity in single-spore germination assays. Interestingly, asparagine-rich repeat sequences in GerG’s central region facilitate spontaneous gel formation in vitro even though they are dispensable for GerG-mediated control of germination. Since GerG is found exclusively in C. difficile, our results suggest that exploiting GerG function could represent a promising avenue for developing C. difficile-specific anti-infective therapies.

  9. Methods for assessing Phytophthora ramorum chlamydospore germination

    Science.gov (United States)

    Joyce Eberhart; Elilzabeth Stamm; Jennifer Parke

    2013-01-01

    Germination of chlamydospores is difficult to accurately assess when chlamydospores are attached to remnants of supporting hyphae. We developed two approaches for closely observing and rigorously quantifying the frequency of chlamydospore germination in vitro. The plate marking and scanning method was useful for quantifying germination of large...

  10. 7 CFR 201.20 - Germination.

    Science.gov (United States)

    2010-01-01

    ... 7 Agriculture 3 2010-01-01 2010-01-01 false Germination. 201.20 Section 201.20 Agriculture... REGULATIONS Labeling Agricultural Seeds § 201.20 Germination. The label shall show the percentage of germination each kind, or kind and variety, or kind and type, or kind and hybrid of agricultural seed present...

  11. Development of a Method to Monitor Gene Expression in Single Bacterial Cells During the Interaction With Plants and Use to Study the Expression of the Type III Secretion System in Single Cells of Dickeya dadantii in Potato

    Directory of Open Access Journals (Sweden)

    Zhouqi Cui

    2018-06-01

    Full Text Available Dickeya dadantii is a bacterial plant pathogen that causes soft rot disease on a wide range of host plants. The type III secretion system (T3SS is an important virulence factor in D. dadantii. Expression of the T3SS is induced in the plant apoplast or in hrp-inducing minimal medium (hrp-MM, and is repressed in nutrient-rich media. Despite the understanding of induction conditions, how individual cells in a clonal bacterial population respond to these conditions and modulate T3SS expression is not well understood. In our previous study, we reported that in a clonal population, only a small proportion of bacteria highly expressed T3SS genes while the majority of the population did not express T3SS genes under hrp-MM condition. In this study, we developed a method that enabled in situ observation and quantification of gene expression in single bacterial cells in planta. Using this technique, we observed that the expression of the T3SS genes hrpA and hrpN is restricted to a small proportion of D. dadantii cells during the infection of potato. We also report that the expression of T3SS genes is higher at early stages of infection compared to later stages. This expression modulation is achieved through adjusting the ratio of T3SS ON and T3SS OFF cells and the expression intensity of T3SS ON cells. Our findings not only shed light into how bacteria use a bi-stable gene expression manner to modulate an important virulence factor, but also provide a useful tool to study gene expression in individual bacterial cells in planta.

  12. Habitat specialization through germination cueing

    DEFF Research Database (Denmark)

    Ten Brink, Dirk-Jan; Hendriksma, Harmen; Bruun, Hans Henrik

    2013-01-01

    This study examined the adaptive association between seed germination ecology and specialization to either forest or open habitats across a range of evolutionary lineages of seed plants, in order to test the hypotheses that (1) species' specialization to open vs. shaded habitats is consistently...

  13. Life cycle inventory for the production of germinated oil palm seeds at a selected seed production unit in Malaysia

    Science.gov (United States)

    Khairuddin, Nik Sasha Khatrina; Ismail, B. S.; Muhamad, Halimah; May, Choo Yuen

    2013-11-01

    The increasing global demand for edible oil has encouraged Malaysia to increase the areas under oil palm cultivation. The total demand for germinated oil palm seeds in the years 2009, 2010, 2011 and 2012 were 86.4, 76.5, 72.6 and 75.2 million, respectively. Production of germinated oil palm seeds is the first link in the palm oil supply chain. Therefore, good management practices at seed production stage is required to ensure only high quality germinated oil palm seeds are produced before sale to customers. Life cycle assessment (LCA) has been used as a tool to assess environmental impact of the processes throughout a product's lifespan and this approach is an important tool for assessing green house gas (GHG) emission. For this study, a gate-to-gate life cycle inventory (LCI) of a single germinated oil palm seed production unit was carried out. The functional unit used for this LCI was one germinated oil palm seed. To determine the environmental impact for the production of germinated oil palm seeds, information on the inputs were obtained. The inputs for the production of germinated oil palm seeds involved materials such as polyethylene bags, electricity, water, chemicals and fungicides. For this study, the system boundary involved seed germination process and management of germinated oil palm seeds. It was found that the amount of input such as materials and energy used in the production of germinated oil palm seeds was very minimal.

  14. Effects of nitrate and sulfate on the performance and bacterial community structure of membrane-less single-chamber air-cathode microbial fuel cells.

    Science.gov (United States)

    Seo, Yoonjoo; Kang, Hyemin; Chang, Sumin; Lee, Yun-Yeong; Cho, Kyung-Suk

    2018-01-02

    Membrane-less, single-chamber, air-cathode, microbial fuel cells (ML-SC MFCs) have attracted attention as being suitable for wastewater treatment. In this study, the effects of nitrate and sulfate on the performance of ML-SC MFCs and their bacterial structures were evaluated. The maximum power density increased after nitrate addition from 8.6 mW·m -2 to 14.0 mW·m -2 , while it decreased after sulfate addition from 11.5 mW·m -2 to 7.7 mW·m -2 . The chemical oxygen demand removal efficiencies remained at more than 90% regardless of the nitrate or sulfate additions. The nitrate was removed completely (93.0%) in the ML-SC MFC, while the sulfate removal efficiency was relatively low (17.6%). Clostridium (23.1%), Petrimonas (20.0%), and unclassified Rhodocyclaceae (6.2%) were dominant on the anode before the addition of nitrate or sulfate. After the addition of nitrate, Clostridium was still the most dominant on the anode (23.6%), but Petrimonas significantly decreased (6.0%) and unclassified Rhodocyclaceae increased (17.1%). After the addition of sulfate, the amount of Clostridium almost doubled in the composition on the anode (43.2%), while Petrimonas decreased (5.5%). The bacterial community on the cathode was similar to that on the anode after the addition of nitrate. However, Desulfovibrio was remarkably dominant on the cathode (32.9%) after the addition of sulfate. These results promote a deeper understanding of the effects of nitrate or sulfate on the ML-SC MFCs' performance and their bacterial community.

  15. Unified analysis of ensemble and single-complex optical spectral data from light-harvesting complex-2 chromoproteins for gaining deeper insight into bacterial photosynthesis

    Science.gov (United States)

    Pajusalu, Mihkel; Kunz, Ralf; Rätsep, Margus; Timpmann, Kõu; Köhler, Jürgen; Freiberg, Arvi

    2015-11-01

    Bacterial light-harvesting pigment-protein complexes are very efficient at converting photons into excitons and transferring them to reaction centers, where the energy is stored in a chemical form. Optical properties of the complexes are known to change significantly in time and also vary from one complex to another; therefore, a detailed understanding of the variations on the level of single complexes and how they accumulate into effects that can be seen on the macroscopic scale is required. While experimental and theoretical methods exist to study the spectral properties of light-harvesting complexes on both individual complex and bulk ensemble levels, they have been developed largely independently of each other. To fill this gap, we simultaneously analyze experimental low-temperature single-complex and bulk ensemble optical spectra of the light-harvesting complex-2 (LH2) chromoproteins from the photosynthetic bacterium Rhodopseudomonas acidophila in order to find a unique theoretical model consistent with both experimental situations. The model, which satisfies most of the observations, combines strong exciton-phonon coupling with significant disorder, characteristic of the proteins. We establish a detailed disorder model that, in addition to containing a C2-symmetrical modulation of the site energies, distinguishes between static intercomplex and slow conformational intracomplex disorders. The model evaluations also verify that, despite best efforts, the single-LH2-complex measurements performed so far may be biased toward complexes with higher Huang-Rhys factors.

  16. Germination conditions affect physicochemical properties of germinated brown rice flour.

    Science.gov (United States)

    Charoenthaikij, Phantipha; Jangchud, Kamolwan; Jangchud, Anuvat; Piyachomkwan, Kuakoon; Tungtrakul, Patcharee; Prinyawiwatkul, Witoon

    2009-01-01

    Germinated brown rice has been reported to be nutritious due to increased free gamma-aminobutyric acid (GABA). The physicochemical properties of brown rice (BR) and glutinous brown rice (GNBR) after germination as affected by different steeping times (24, 36, 48, and 72 h depending on the rice variety) and pHs of steeping water (3, 5, 7, and as-is) were determined and compared to those of the nongerminated one (control). As the steeping time increased or pH of steeping water decreased, germinated brown rice flours (GBRF) from both BR and GNBR had greater reducing sugar, free GABA and alpha-amylase activity; while the total starch and viscosity were lower than their respective controls. GBRFs from both BR and GNBR prepared after 24-h steeping time at pH 3 contained a high content of free GABA at 32.70 and 30.69 mg/100 g flour, respectively. The peak viscosity of GBRF obtained from both BR and GNBR (7.42 to 228.22 and 4.42 to 58.67 RVU, respectively) was significantly lower than that of their controls (255.46 and 190.17 RVU, respectively). The principal component analysis indicated that the important variables for discriminating among GBRFs, explained by the first 2 components at 89.82% of total explained variance, were the pasting profiles, alpha-amylase activity, and free GABA.

  17. Germline TP53 mutations and single nucleotide polymorphisms in children Mutaciones y polimorfismos de un único nucleótido del gen TP53 en línea germinal en niños

    Directory of Open Access Journals (Sweden)

    Pamela Valva

    2009-02-01

    Full Text Available Mutations in the gene TP53, which codifies the tumor suppressor protein p53, are found in about 50% of tumors. These mutations can occur not only at somatic level, but also in germline. Pediatric cancer patients, mostly with additional family history of malignancy, should be considered as potential TP53 germline mutation carriers. Germline TP53 mutations and polymorphisms have been widely studied to determine their relation with different tumors' pathogenesis. Our aim was to analyze the occurrence frequency of germline TP53 mutations and polymorphisms and to relate these to tumor development in a pediatric series. Peripheral blood mononuclear cell samples from 26 children with solid tumors [PST] and 21 pediatric healthy donors [HD] were analyzed for germline mutations and polymorphisms in TP53 gene spanning from exon 5 to 8 including introns 5 and 7. These PCR amplified fragments were sequenced to determine variations. A heterozygous mutation at codon 245 was found in 1/26 PST and 0/21 HD. Comparative polymorphisms distribution, at position 14181 and 14201(intron 7, between HD and PST revealed a trend of association (p= 0.07 with cancer risk. HD group disclosed a similar polymorphism distribution as published data for Caucasian and Central/South American populations. This is the first study about TP53 variant frequency and distribution in healthy individuals and cancer patients in Argentina.El gen que codifica para la proteína supresora de tumor p53 (TP53 se encuentra mutado en aproximadamente el 50% de los tumores. Estas mutaciones pueden presentarse como somáticas o en línea germinal. Los niños con tumores, sobre todo aquellos con historia familiar de enfermedad oncológica, deben considerarse potenciales portadores de mutaciones en línea germinal. Las mutaciones de TP53 y los polimorfismos son estudiados para determinar su relación con la patogénesis de diferentes tumores. El objetivo del trabajo fue analizar la frecuencia de

  18. Effect of animal sera on Bacillus anthracis Sterne spore germination and vegetative cell growth.

    Science.gov (United States)

    Bensman, M D; Mackie, R S; Minter, Z A; Gutting, B W

    2012-08-01

     The aims of this work were to investigate the effects of sera on B. anthracis Sterne germination and growth. Sera examined included human, monkey and rabbit sera, as well as sera from eight other species.  Standard dilution plate assay (with and without heat kill) was used as a measure of germination, and spectroscopy was used to measure growth. In addition, a Coulter Counter particle counter was used to monitor germination and growth based on bacterial size. Spores germinated best in foetal bovine and monkey sera, moderately with human sera and showed limited germination in the presence of rabbit or rat sera. Vegetative bacteria grew best in foetal bovine sera and moderately in rabbit sera. Human and monkey sera supported little growth of vegetative bacteria.  The data suggested sera can have a significant impact on germination and growth of Sterne bacteria.  These data should be considered when conducting in vitro cell culture studies and may aid in interpreting in vivo infection studies. © 2012 The Authors Journal of Applied Microbiology © 2012 The Society for Applied Microbiology.

  19. Molecular dynamics in germinating, endophyte-colonized quinoa seeds

    Science.gov (United States)

    2017-01-01

    Aims The pseudo-cereal quinoa has an outstanding nutritional value. Seed germination is unusually fast, and plant tolerance to salt stress exceptionally high. Seemingly all seeds harbor bacterial endophytes. This work examines mitogen-activated protein kinase (MAPK) activities during early development. It evaluates possible contribution of endophytes to rapid germination and plant robustness. Methods MAPK activities were monitored in water- and NaCl-imbibed seeds over a 4-h-period using an immunoblot-based approach. Cellulolytic and pectinolytic abilities of bacteria were assessed biochemically, and cellular movement, biofilm, elicitor and antimicrobial compound synthesis genes sequenced. GyrA-based, cultivation-independent studies provided first insight into endophyte diversity. Results Quinoa seeds and seedlings exhibit remarkably complex and dynamic MAPK activity profiles. Depending on seed origin, variances exist in MAPK patterns and probably also in endophyte assemblages. Mucilage-degrading activities enable endophytes to colonize seed surfaces of a non-host species, chia, without apparent adverse effects. Conclusions Owing to their motility, cell wall-loosening and elicitor-generating abilities, quinoa endophytes have the potential to drive cell expansion, move across cell walls, generate damage-associated molecular patterns and activate MAPKs in their host. Bacteria may thus facilitate rapid germination and confer a primed state directly upon seed rehydration. Transfer into non-native crops appears both desirable and feasible. PMID:29416180

  20. Factors influencing seed germination in Cerrado grasses

    Directory of Open Access Journals (Sweden)

    Rosana Marta Kolb

    2016-03-01

    Full Text Available Few studies address the ecology of herbs of Cerrado grasslands, which are ecosystems where the long dry season, high temperatures, insolation, fire and invasive grasses greatly influencing germination and the establishment of plants. We assessed germination of 13 species of Poaceae from Cerrado grasslands under nursery conditions or in germination chambers, the latter with i recently collected seeds and seeds after six months storage, ii under constant and alternating temperatures, and iii in the presence and absence of light. Germinability, mean germination time (MGT and required light were quantified to elucidate factors involved in successful germination. Germinability was low for most grasses, probably because of low seed viability. For most species, germinability and MGT were not altered by seed storage. Germination percentages were higher at alternating temperatures and in the presence of light, factors that are more similar to natural environmental situations compared with constant temperature or the absence of light. Our findings indicate that alternating temperatures and light incidence are key factors for germination of species of Poaceae. The maintenance of these environmental factors, which are crucial for the conservation of Cerrado grasslands, depends on appropriate management interventions, such as fire management and the control of biological invasion.

  1. Effect of industrial pollution on seed germination

    Energy Technology Data Exchange (ETDEWEB)

    Iqbal, M.Z.; Qadir, S.A.

    1973-01-01

    The germination behavior of seeds in polluted waters and polluted soil extracts was found to be identical, only a few species behaved differently. Prosopis juliflora, Haloxylon recurvum, Acacia senegal showed best germination in the two conditions but Prosopis juliflora was the most resistant to pollution. In Suaeda fruticosa no germination took place in the control treatment whereas highest germination (70%) was seen in treatment with polluted soil extract of EPLA. Blepharis sindica showed a stimulating effect of polluted water on germination, whereas low germination was observed when their seeds were treated with the soil extract of the same site. 40% germination of Suaeda monoica was seen in polluted water of Carbon and Ribbon Mfg. Co., whereas 30% germination was found in a control treatment. Low percentage of germination was found when the seeds of Cassia holosericea were treated with polluted waters of different industries as compared to soil extract treatments of the same industries. Datura alba showed 50, 30 and 10% seed germination in polluted soil extract of Carbon and Ribbon Mfg. Co., in control and in polluted water of Darbar Soap Works, respectively. 5 references, 1 table.

  2. Fluorescence-based methods for the detection of pressure-induced spore germination and inactivation

    Science.gov (United States)

    Baier, Daniel; Reineke, Kai; Doehner, Isabel; Mathys, Alexander; Knorr, Dietrich

    2011-03-01

    The application of high pressure (HP) provides an opportunity for the non-thermal preservation of high-quality foods, whereas highly resistant bacterial endospores play an important role. It is known that the germination of spores can be initiated by the application of HP. Moreover, the resistance properties of spores are highly dependent on their physiological states, which are passed through during the germination. To distinguish between different physiological states and to detect the amount of germinated spores after HP treatments, two fluorescence-based methods were applied. A flow cytometric method using a double staining with SYTO 16 as an indicator for germination and propidium iodide as an indicator for membrane damage was used to detect different physiological states of the spores. During the first step of germination, the spore-specific dipicolinic acid (DPA) is released [P. Setlow, Spore germination, Curr. Opin. Microbiol. 6 (2003), pp. 550-556]. DPA reacts with added terbium to form a distinctive fluorescent complex. After measuring the fluorescence intensity at 270 nm excitation wavelength in a fluorescence spectrophotometer, the amount of germinated spores can be determined. Spores of Bacillus subtilis were treated at pressures from 150 to 600 MPa and temperatures from 37 °C to 60 °C in 0.05 M ACES buffer solution (pH 7) for dwell times of up to 2 h. During the HP treatments, inactivation up to 2log 10 cycles and thermal sensitive populations up to 4log 10 cycles could be detected by plate counts. With an increasing number of thermal sensitive spores, an increased proportion of spores in germinated states was detected by flow cytometry. Also the released amount of DPA increased during the dwell times. Moreover, a clear pressure-temperature-time-dependency was shown by screening different conditions. The fluorescence-based measurement of the released DPA can provide the opportunity of an online monitoring of the germination of spores under HP inside

  3. The characteristics of post-neurosurgical bacterial meningitis in elective neurosurgery in 2012: A single institute study.

    Science.gov (United States)

    Tian, Runfa; Hao, Shuyu; Hou, Zonggang; Gao, Zhixian; Liu, Baiyun

    2015-12-01

    Most post-neurosurgical meningitis research has been focused on large cohorts with numerous cases followed over several years. However, the characteristics of post-neurosurgical meningitis in an entire single year are still unclear, and knowledge of these characteristics might influence the selection of appropriate antibiotics and therapeutic strategies for the successful management of this disease. Our aim is to obtain a better understanding of post-neurosurgical meningitis over a single entire year. Patients with positive meningitis cultures after neurosurgical operations in our hospital during the entire year of 2012 were included in the analysis. We report demographic characteristics, morbidity during different seasons, clinical and bacteriological profiles, sensitivity to antibiotics and causes of the post-neurosurgical meningitis infections in our cohort. Of the 6407 patients who underwent neurosurgical procedures during the study period, 146 developed post-neurosurgical meningitis and the overall incidence of meningitis was 2.28%. The incidence of meningitis was significantly higher in patients who underwent surgery in the autumn and winter than spring or summer (p=0.000). The most common organisms causing meningitis were Gram-positive bacteria, followed by the Klebsiella and Baumannii species. Compound sulfamethoxazole (52.6%) and vancomycin (10.5%) were the most active antibiotics against Gram-positive bacteria strains, whereas meropenem (43.8%) and polymyxin (18.8%) were active against Gram-negative bacillus strains. Post-neurosurgical meningitis usually occurs in the autumn and winter of the year in our hospital. Gram-positive organisms, which are sensitive to compound sulfamethoxazole and vancomycin, are the most common causative pathogens of post-neurosurgical meningitis in the northern mainland of China. Copyright © 2015 Elsevier B.V. All rights reserved.

  4. [The research of Valeriana amurensis seed germination characteristics].

    Science.gov (United States)

    Liu, Juan; Yang, Chun-Rong; Jiang, Bo; Fang, Min; Du, Juan

    2011-10-01

    To study the effect of different treatments on the Valeriana amurensis seed germination rate. Used different chemical reagents and seed soakings on the routine germination test and the orthogonal test of the Valeriana amurensis seed, calculated the germination rate under different germination condition. Valeriana amurensis treated with different chemical reagends had different germination rate. The suitable immersion time could enhance Valeriana amurensis seed germination rate. Different treatment time, different disposal temperature, different germination temperature would have an impact on the Valeriana amurensis seed germination rate. In order to raise the Valeriana amurensis seed germination rate, use appropriate treatment on the seed before plant seeds; The seed growing must under suitable time and temperature.

  5. 7 CFR 201.53 - Source of seeds for germination.

    Science.gov (United States)

    2010-01-01

    ... REGULATIONS Germination Tests in the Administration of the Act § 201.53 Source of seeds for germination. (a) When both purity and germination tests are required, seeds for germination shall be taken from the... to size or appearance. (b) When only a germination test is required and the pure seed is estimated or...

  6. Germination Ecology of Johnsongrass Seeds (Sorghum halepense (L. PERS.

    Directory of Open Access Journals (Sweden)

    Mehdi Mojab

    2018-01-01

    day/night (5, 10, 15, 20, 25, 30, 35, 40 and 45 C in both light/dark and dark regimes. The salt and osmotic potentials were applied in -1, -3, -5, -7, -9, -11 levels and control treatment in order to survey the stress of salt, drought on seed germination and to compare both stress on it. NaCl was applied in the Vant Hoff method to influence salt stress and also PEG 6000 was applied in the Michel methods to affect osmotic potential. In the burial depth experiment, a number of 30 seeds, for 30 days, were laid in the depth of 0, 0.5, 1, 2, 3, 4, 6, 8 cm in plastic vases with 15 cm diameters. All experiments were conducted twice in the form of randomized complete-block design with four replications. Each replication was arranged on a different shelf of growth chamber and considered as a single block in the laboratory experiments. The data of the replicated experiments were pooled for analysis, as the time interaction and treatment was absolutely meaningless. A functional three-parameter logistic model Was fitted to the germination values (% obtained at different concentrations of NaCl or osmotic potential. Also, a sigmoidal decay curve was fitted to show the seedling emergence (% values at different burial depths. Results and Discussion Seed germination was influenced significantly on different treatments of breaking dormancy (Fig 1. Sulfuric acid treatments showed significant difference rather than control treatment. In 30 and 45 min sulfuric acid scarification, germination was recorded more than 95 %. Based on the achieved results it is very probable that the hard seed prevents germination and this issue causes the weed remains stable in seed bank. Germination percentage was not affected by light regime and temperature interaction (both in constant and alternative (Fig 2a and 2b, the influence of different temperatures on the feature was significant (Fig 2a. The same germination has been seen in all temperatures (both light and light/ dark regime in all temperature, The

  7. Zinnia Germination and Lunar Soil Amendment

    Science.gov (United States)

    Reese, Laura

    2017-01-01

    Germination testing was performed to determine the best method for germinating zinnias. This method will be used to attempt to germinate the zinnia seeds produced in space. It was found that seed shape may be critically important in determining whether a seed will germinate or not. The ability of compost and worm castings to remediate lunar regolith simulant for plant growth was tested. It was found that neither treatment effectively improves plant growth in lunar regolith simulant. A potential method of improving lunar regolith simulant by mixing it with arcillite was discovered.

  8. DOES JASMONIC ACID PREVENT THE GERMINATION

    OpenAIRE

    ÇAVUŞOĞLU, Kürşat

    2009-01-01

    Abstract: Effect of jasmonic acid on seed germination and seedling growth of barley (Hordeum vulgare L. cv. Bülbül 89) was investigated in the present study. Jasmonic acid concentrations less than 1500 µM have not inhibited the seed germination, while 1500 and 2000 µM jasmonic acid levels caused atypical germination. The germination was completely inhibited at 3000 µM level of jasmonic acid. However, the seedling growth clearly slowed down with increasing concentrations of jasmonic acid. Furt...

  9. GERMINATION STUDIES ON Tabebuia impetiginosa Mart. SEEDS

    Directory of Open Access Journals (Sweden)

    Edvaldo Aparecido Amaral da Silva

    2004-06-01

    Full Text Available Seed germination and seedling production of native forest tree species are an important step in ex situ conservation programs and in the reforestation with ecological purposes. Therefore, understanding seed germination and its regulation is mandatory for the complete success of the conservation programs and revegetation techniques. Thus, morphological studies, temperature requirements for seed germination and its control by gibberellins (GAs were studied in Tabebuia impetiginosa (“ipê-roxo” seeds. The best temperature for germination under constant light was 30oC. The imbibition of T. impetiginosa seeds followed the common triphasic pattern, with most of the seeds attaining phase II at 24 hours and phase III at 72 hours of imbibition. Visible germination, as radicle elongation, started at 30 hours in water-imbibed seeds and at 24 hours in GA-imbibed seeds. Seeds imbibed in Paclobutrazol, an inhibitor of GA biosynthesis, failed to germinate. However, application of exogenous gibberellins overcame inhibition and allowed germination, suggesting that GAs are regulators of Tabebuia impetiginosa seed germination. The results suggested that germination in Tabebuia impetiginosa seeds is controlled by elongation of the radicle and gibberellins may play an important role in regulating it. The possible role of gibberellins is discussed.

  10. Etude des potentialites germinatives pour une regeneration ...

    African Journals Online (AJOL)

    ... taux de germination a été obtenu avec des graines de petites tailles à la température ambiante (32°C). Le traitement préalable à l'eau de javel à 8% accroît le taux de germination (40% de réponse). La lumière et l'obscurité n'ont aucun effet sur la germination. Mots clés : Neocarya macrophylla, germination, régénération.

  11. Germination of Ocotea pulchella (Nees Mez (Lauraceae seeds in laboratory and natural restinga environment conditions

    Directory of Open Access Journals (Sweden)

    LA. Pires

    Full Text Available The germination response of Ocotea pulchella (Nees Mez seeds to light, temperature, water level and pulp presence is introduced. The laboratory assays were carried out in germination chambers and thermal-gradient apparatus, whereas the field assays were performed in environments with distinct light, temperature and soil moisture conditions within a permanent parcel of Restinga forest of the Parque Estadual da Ilha do Cardoso, Cananéia, São Paulo. The seeds do not exhibit dormancy, they are non photoblastic, and a loss of viability in dry stored seeds can be related to a decrease in water content of the seed. The presence of the pulp and the flooded substratum influenced negatively the germination of O. pulchella seeds tested in the laboratory. Otherwise, light and temperature probably are not limiting factors of the germination of O. pulchella seeds in the natural environment of Restinga. The optimum temperature range for germination of Ocotea pulchella seeds was 20 to 32 ºC, the minimum or base temperature estimated was 11 ºC and the maximum ranged between 33 and 42 ºC. The isotherms exhibited a sigmoidal pattern well described by the Weibull model in the sub-optimal temperature range. The germinability of O. pulchella seeds in the understorey, both in wet and dry soil, was higher than in gaps. Germination was not affected by fluctuations in soil moisture content in the understorey environment, whereas in gaps, germination was higher in wet soils. Thus, the germination of this species involves the interaction of two or more factors and it cannot be explained by a single factor.

  12. Germination of Ocotea pulchella (Nees) Mez (Lauraceae) seeds in laboratory and natural restinga environment conditions.

    Science.gov (United States)

    Pires, L A; Cardoso, V J M; Joly, C A; Rodrigues, R R

    2009-08-01

    The germination response of Ocotea pulchella (Nees) Mez seeds to light, temperature, water level and pulp presence is introduced. The laboratory assays were carried out in germination chambers and thermal-gradient apparatus, whereas the field assays were performed in environments with distinct light, temperature and soil moisture conditions within a permanent parcel of Restinga forest of the Parque Estadual da Ilha do Cardoso, Cananéia, São Paulo. The seeds do not exhibit dormancy, they are non photoblastic, and a loss of viability in dry stored seeds can be related to a decrease in water content of the seed. The presence of the pulp and the flooded substratum influenced negatively the germination of O. pulchella seeds tested in the laboratory. Otherwise, light and temperature probably are not limiting factors of the germination of O. pulchella seeds in the natural environment of Restinga. The optimum temperature range for germination of Ocotea pulchella seeds was 20 to 32 degrees C, the minimum or base temperature estimated was 11 degrees C and the maximum ranged between 33 and 42 degrees C. The isotherms exhibited a sigmoidal pattern well described by the Weibull model in the sub-optimal temperature range. The germinability of O. pulchella seeds in the understorey, both in wet and dry soil, was higher than in gaps. Germination was not affected by fluctuations in soil moisture content in the understorey environment, whereas in gaps, germination was higher in wet soils. Thus, the germination of this species involves the interaction of two or more factors and it cannot be explained by a single factor.

  13. Indole-3-acetic acid (IAA) producing Pseudomonas isolates inhibit seed germination and α-amylase activity in durum wheat (Triticum turgidum L.)

    Energy Technology Data Exchange (ETDEWEB)

    Tabatabaei, S.; Ehsanzadeh, P.; Etesami, H.; Alikhani, H.A.; Glick, B.R.

    2016-11-01

    The role of plant-associated bacteria in plant physiology and metabolism is well documented, but little has been known about the roles played by Pseudomonas in durum wheat (Triticum turgidum L. var durum) growth and development. An in vitroexperiment was conducted to observe the effect of the inoculation of four indole-3-acetic acid (IAA)-producing Pseudomonas isolates and exogenous IAA on seed germination traits and α-amylase activity of durum wheat. The results showed inoculation with all bacterial isolates led to a decrease in the germination percent, although the extent of the depression varied with the isolate. A significant relationship between concentrations of bacterial IAA and the germination inhibition percent in durum wheat seeds by different bacteria strains was observed. The results of this assay showed the effect of bacterial isolates on α-amylase activity after six and 8 days of inoculation was significant, while effect of these isolates on α-amylase activity after two and 4 days of inoculation was not meaningful. In addition, the exogenously applied IAA displayed a concentration-dependent effect on seed germination attributes and α-amylase activity, consistent with the possibility that the inhibitory effect of bacterial inoculation on seed germination was in consequence of bacteria-produced IAA. Therefore, it may suggested that the inhibitory role of IAA in seed germination and α-amylase activity should be taken into account during the screening of IAA-producing Pseudomonas isolates for durum wheat growth promoting agents. (Author)

  14. The biomechanics of seed germination.

    Science.gov (United States)

    Steinbrecher, Tina; Leubner-Metzger, Gerhard

    2017-02-01

    From a biomechanical perspective, the completion of seed (and fruit) germination depends on the balance of two opposing forces: the growth potential of the embryonic axis (radicle-hypocotyl growth zone) and the restraint of the seed-covering layers (endosperm, testa, and pericarp). The diverse seed tissues are composite materials which differ in their dynamic properties based on their distinct cell wall composition and water uptake capacities. The biomechanics of embryo cell growth during seed germination depend on irreversible cell wall loosening followed by water uptake due to the decreasing turgor, and this leads to embryo elongation and eventually radicle emergence. Endosperm weakening as a prerequisite for radicle emergence is a widespread phenomenon among angiosperms. Research into the biochemistry and biomechanics of endosperm weakening has demonstrated that the reduction in puncture force of a seed's micropylar endosperm is environmentally and hormonally regulated and involves tissue-specific expression of cell wall remodelling proteins such as expansins, diverse hydrolases, and the production of directly acting apoplastic reactive oxygen. The endosperm-weakening biomechanics and its underlying cell wall biochemistry differ between the micropylar (ME) and chalazal (CE) endosperm domains. In the ME, they involve cell wall loosening, cell separation, and programmed cell death to provide decreased and localized ME tissue resistance, autolysis, and finally the formation of an ME hole required for radicle emergence. Future work will further unravel the molecular mechanisms, environmental regulation, and evolution of the diverse biomechanical cell wall changes underpinning the control of germination by endosperm weakening. © The Author 2016. Published by Oxford University Press on behalf of the Society for Experimental Biology. All rights reserved. For permissions, please email: journals.permissions@oup.com.

  15. Comparative analysis of regulatory elements in different germin-like ...

    African Journals Online (AJOL)

    STORAGESEVER

    INTRODUCTION. Germin and germin-like proteins (GLPs) is a member of ..... analysis of germin-like protein gene 2 promoter from Oryza sativa L. ssp. Indica. ... esculenta Crantz) root proteome: Protein identification and differential expression.

  16. on seed germination and growth of Garcinia kola

    African Journals Online (AJOL)

    SARAH

    2016-07-31

    Jul 31, 2016 ... Seed germination tests: After 72 h of fermentation in plastic bags, seeds were ... Models (GLM) procedure of the R statistical version 9.1 was used to identify traits .... L-1) had accelerated seed germination. Germination rates.

  17. A Waking Review: Old and Novel Insights into the Spore Germination in Streptomyces

    Directory of Open Access Journals (Sweden)

    Jan Bobek

    2017-11-01

    Full Text Available The complex development undergone by Streptomyces encompasses transitions from vegetative mycelial forms to reproductive aerial hyphae that differentiate into chains of single-celled spores. Whereas their mycelial life – connected with spore formation and antibiotic production – is deeply investigated, spore germination as the counterpoint in their life cycle has received much less attention. Still, germination represents a system of transformation from metabolic zero point to a new living lap. There are several aspects of germination that may attract our attention: (1 Dormant spores are strikingly well-prepared for the future metabolic restart; they possess stable transcriptome, hydrolytic enzymes, chaperones, and other required macromolecules stabilized in a trehalose milieu; (2 Germination itself is a specific sequence of events leading to a complete morphological remodeling that include spore swelling, cell wall reconstruction, and eventually germ tube emergences; (3 Still not fully unveiled are the strategies that enable the process, including a single cell’s signal transduction and gene expression control, as well as intercellular communication and the probability of germination across the whole population. This review summarizes our current knowledge about the germination process in Streptomyces, while focusing on the aforementioned points.

  18. A Waking Review: Old and Novel Insights into the Spore Germination in Streptomyces.

    Science.gov (United States)

    Bobek, Jan; Šmídová, Klára; Čihák, Matouš

    2017-01-01

    The complex development undergone by Streptomyces encompasses transitions from vegetative mycelial forms to reproductive aerial hyphae that differentiate into chains of single-celled spores. Whereas their mycelial life - connected with spore formation and antibiotic production - is deeply investigated, spore germination as the counterpoint in their life cycle has received much less attention. Still, germination represents a system of transformation from metabolic zero point to a new living lap. There are several aspects of germination that may attract our attention: (1) Dormant spores are strikingly well-prepared for the future metabolic restart; they possess stable transcriptome, hydrolytic enzymes, chaperones, and other required macromolecules stabilized in a trehalose milieu; (2) Germination itself is a specific sequence of events leading to a complete morphological remodeling that include spore swelling, cell wall reconstruction, and eventually germ tube emergences; (3) Still not fully unveiled are the strategies that enable the process, including a single cell's signal transduction and gene expression control, as well as intercellular communication and the probability of germination across the whole population. This review summarizes our current knowledge about the germination process in Streptomyces , while focusing on the aforementioned points.

  19. Optimization of single plate-serial dilution spotting (SP-SDS) with sample anchoring as an assured method for bacterial and yeast cfu enumeration and single colony isolation from diverse samples.

    Science.gov (United States)

    Thomas, Pious; Sekhar, Aparna C; Upreti, Reshmi; Mujawar, Mohammad M; Pasha, Sadiq S

    2015-12-01

    We propose a simple technique for bacterial and yeast cfu estimations from diverse samples with no prior idea of viable counts, designated as single plate-serial dilution spotting (SP-SDS) with the prime recommendation of sample anchoring (10 0 stocks). For pure cultures, serial dilutions were prepared from 0.1 OD (10 0 ) stock and 20 μl aliquots of six dilutions (10 1 -10 6 ) were applied as 10-15 micro-drops in six sectors over agar-gelled medium in 9-cm plates. For liquid samples 10 0 -10 5 dilutions, and for colloidal suspensions and solid samples (10% w/v), 10 1 -10 6 dilutions were used. Following incubation, at least one dilution level yielded 6-60 cfu per sector comparable to the standard method involving 100 μl samples. Tested on diverse bacteria, composite samples and Saccharomyces cerevisiae , SP-SDS offered wider applicability over alternative methods like drop-plating and track-dilution for cfu estimation, single colony isolation and culture purity testing, particularly suiting low resource settings.

  20. Changes in ultraviolet resistance and photoproduct formation as early events in spore germination of Bacillus cereus T

    International Nuclear Information System (INIS)

    Irie, R.

    1978-01-01

    In order to determine the timing of the change in the state of DNA in bacterial spores during the course of germination, L-alanine-induced germination of Bacillus cereus spores was interrupted by 0.3M CaCl 2 as an inhibitor, and the resulting semi-refractive spores (spores at the end of the first phase of germination) were examined for UV-resistance and photoproduct formation. Upon UV-irradiation, these spores, still having a semi-refractile core as observed under a phase-contrast microscope, gave rise to mainly the cyclobutane-type thymine dimer. It was concluded that change in the stats of the spore DNA occurs early in the process of germination, i.e. before the refractility of the core is lost. It was also found that CaCl 2 markedly prolonged the duration of the transient UV-resistant stage. (author)

  1. High Pressure Germination of Bacillus subtilis Spores with Alterations in Levels and Types of Germination Proteins

    Science.gov (United States)

    2014-01-01

    1ITLE AND SUBTITLE 5a CONTRACTNUMBER High pressure germination of Bacillus subtilis spores with W911NF-09-l-0286 alterations in levels and types of...A moderate high pressure (mHP) of 150 megaPascals (MPa) triggers germination of Bacillus subtilis spores via germinant receptors (GRs), while...germination by a very high pressure (vHP) of550 MPa is GR-independent. The mHP and vHP germination of Bacillus subtilis spores with different levels ofGRs

  2. Diversity of the Germination Apparatus in Clostridium botulinum Groups I, II, III and IV

    Directory of Open Access Journals (Sweden)

    Jason Brunt

    2016-10-01

    Full Text Available Clostridium botulinum is a highly dangerous pathogen that forms very resistant endospores that are ubiquitous in the environment, and which, under favourable conditions germinate to produce vegetative cells that multiply and form the exceptionally potent botulinum neurotoxin. To improve the control of botulinum neurotoxin-forming clostridia, it is important to understand the mechanisms involved in spore germination. Here we present models for spore germination in C. botulinum based on comparative genomics analyses, with C. botulinum Groups I and III sharing similar pathways, which differ from those proposed for C. botulinum Groups II and IV. All spores germinate in response to amino acids interacting with a germinant receptor, with four types of germinant receptor identified (encoded by various combinations of gerA, gerB and gerC genes (gerX. There are three gene clusters with an ABC-like configuration; ABC gerX1, ABABCB gerX2 and ACxBBB gerX4, and a single CA-B gerX3 gene cluster. Subtypes have been identified for most germinant receptors types, and the individual GerX subunits of each cluster show similar grouping in phylogenetic trees. C. botulinum Group I contained the largest variety of gerX subtypes, with three gerX1, three gerX2 and one gerX3 subtypes, while C. botulinum Group III contained two gerX1 types and one gerX4. C. botulinum Groups II and IV contained a single germinant receptor, gerX3 and gerX1, respectively. It is likely that all four C. botulinum Groups include a SpoVA channel involved in DPA release. The cortex lytic enzymes present in C. botulinum Groups I and III appear to be CwlJ and SleB, while in C. botulinum Groups II and IV, SleC appears to be important.

  3. Inhibition of barley grain germination by light

    NARCIS (Netherlands)

    Roth-Bejerano, N.; Meulen, R.M. van der; Wang, M.

    1996-01-01

    Intact grains of barley (Hordeum distichum cv. Triumph) germinated rapidly in the dark or when exposed to brief daily light breaks in the temperature range 15-25°C, although germination proceeded less rapidly at low temperatures. Prolonged illumination (16 h/day) or continuous light inhibited

  4. Germination and seedlings performance of cashew ( Anacardium ...

    African Journals Online (AJOL)

    The effects of nut-sowing orientations on the germination of cashew nuts and the responses of the resultant seedlings to cotyledon removed were studied in the nursery. While cashew nuts sown flat and those with stylar-end up had highest mean germination of 91.67 % and 92.50 % respectively the nuts sown with ...

  5. Seed germination behavior of swallow wort

    Directory of Open Access Journals (Sweden)

    amir hosein pahlavani

    2009-06-01

    Full Text Available The exotic plant, Swallow- wort, a twining perennial of the Milkweed family, has become increasingly invasive in some place of Iran, especially orchards. Increased knowledge of wort germination biology would facilitate development of an optimum control program. Germination of Swallow wort seeds as affected by environmental factors was studied under controlled-environment growth chamber conditions. The following studies were conducted in plant Pests & Diseases Research Institute during the years 2003-4: 1- Effect of constant temperature on germination that including 10, 15, 18, 20, 25, 30, 35 and 40˚C; 2- Effect of light on constant germination; 3- Effect of temperature fluctuations on seed germination: 15/7, 20/12, 25/17 and 30/22˚C. All experiments were conducted with 8 replications. Swallow wort seeds showed no dormancy when detachment from mother plant. Seed germination was strongly influenced by temperature. Light did not play a crucial role on seed germination of this weed. Therefore Swallow wort seeds were not photoblastic and temperature fluctuations did not increase seed germination of Swallow wort. The above characteristics are very important in making swallowwort an invasive weed. Having precise information of these traits enables us to a better management and control of this troublesome weed.

  6. Oxygen requirement of germinating flax seeds

    Science.gov (United States)

    Kuznetsov, Oleg A.; Hasenstein, K. H.

    2003-05-01

    Plant experiments in earth orbit are typically prepared on the ground and germinated in orbit to study gravity effects on the developing seedlings. Germination requires the breakdown of storage compounds, and this metabolism depends upon respiration, making oxygen one of the limiting factors in seed germination. In microgravity lack of run-off of excess water requires careful testing of water dispensation and oxygen availability. In preparation for a shuttle experiment (MICRO on STS-107) we studied germination and growth of flax ( Linum usitatissimum L.) seedlings in the developed hardware (Magnetic Field Chamber, MFC). We tested between four to 32 seeds per chamber (air volume = 14 mL) and after 36 h measured the root length. At 90 μl O 2 per seed (32 seeds/chamber), the germination decreased from 94 to 69%, and the root length was reduced by 20%, compared to 8 seeds per chamber. Based on the percent germination and root length obtained in controlled gas mixtures between 3.6 and 21.6% O 2 we determined the lower limit of reliable germination to be 10 vol. % O 2 at atmospheric pressure. Although the oxygen available in the MFC's can support the intended number of seeds, the data show that seed storage and microgravity-related limitations may reduce germination.

  7. Oxygen requirement of germinating flax seeds

    Science.gov (United States)

    Kuznetsov, Oleg A.; Hasenstein, K. H.; Hasentein, K. H. (Principal Investigator)

    2003-01-01

    Plant experiments in earth orbit are typically prepared on the ground and germinated in orbit to study gravity effects on the developing seedlings. Germination requires the breakdown of storage compounds, and this metabolism depends upon respiration, making oxygen one of the limiting factors in seed germination. In microgravity lack of run-off of excess water requires careful testing of water dispensation and oxygen availability. In preparation for a shuttle experiment (MICRO on STS-107) we studied germination and growth of flax (Linum usitatissimum L.) seedlings in the developed hardware (Magnetic Field Chamber, MFC). We tested between four to 32 seeds per chamber (air volume=14 mL) and after 36 h measured the root length. At 90 microliters O2 per seed (32 seeds/chamber), the germination decreased from 94 to 69%, and the root length was reduced by 20%, compared to 8 seeds per chamber. Based on the percent germination and root length obtained in controlled gas mixtures between 3.6 and 21.6% O2 we determined the lower limit of reliable germination to be 10 vol. % O2 at atmospheric pressure. Although the oxygen available in the MFC's can support the intended number of seeds, the data show that seed storage and microgravity-related limitations may reduce germination. c2003 Published by Elsevier Ltd on behalf of COSPAR.

  8. Comparative Germination Responses of Cowpea and Maize ...

    African Journals Online (AJOL)

    Germination, emergence and establishment phase are critical to the growth cycle of plant as it determines the density of the stand obtained. However, a number of factors including soil available moisture decrease seed germination and the rate of decline is found to vary with crop species. Pot experiment was therefore ...

  9. 7 CFR 201.6 - Germination.

    Science.gov (United States)

    2010-01-01

    ... REGULATIONS Records for Agricultural and Vegetable Seeds § 201.6 Germination. The complete record shall include the records of all laboratory tests for germination and hard seed for each lot of seed offered for transportation in whole or in part. The record shall show the kind of seed, lot number, date of test, percentage...

  10. Is seed conditioning essential for Orobanche germination?

    Science.gov (United States)

    Plakhine, Dina; Ziadna, Hammam; Joel, Daniel M

    2009-05-01

    Parasitic Orobanchaceae germinate only after receiving a chemical stimulus from roots of potential host plants. A preparatory phase of several days that follows seed imbibition, termed conditioning, is known to be required; thereafter the seeds can respond to germination stimulants. The aim of this study was to examine whether conditioning is essential for stimulant receptivity. Non-conditioned seeds of both Orobanche cumana Wallr. and O. aegyptiaca Pers. [syn. Phelipanche aegyptiaca (Pers.) Pomel] were able to germinate in response to chemical stimulation by GR24 even without prior conditioning. Stimulated seeds reached maximal germination rates about 2 weeks after the onset of imbibition, no matter whether the seeds had or had not been conditioned before stimulation. Whereas the lag time between stimulation and germination response of non-conditioned seeds was longer than for conditioned seeds, the total time between imbibition and germination was shorter for the non-conditioned seeds. Unlike the above two species, O. crenata Forsk. was found to require conditioning prior to stimulation. Seeds of O. cumana and O. aegyptiaca are already receptive before conditioning. Thus, conditioning is not involved in stimulant receptivity. A hypothesis is put forward, suggesting that conditioning includes (a) a parasite-specific early phase that allows the imbibed seeds to overcome the stress caused by failing to receive an immediate germination stimulus, and (b) a non-specific later phase that is identical to the pregermination phase between seed imbibition and actual germination that is typical for all higher plants.

  11. High-throughput scoring of seed germination

    NARCIS (Netherlands)

    Ligterink, Wilco; Hilhorst, Henk W.M.

    2017-01-01

    High-throughput analysis of seed germination for phenotyping large genetic populations or mutant collections is very labor intensive and would highly benefit from an automated setup. Although very often used, the total germination percentage after a nominated period of time is not very

  12. Proteomics of Rice Seed Germination

    Directory of Open Access Journals (Sweden)

    Dongli eHe

    2013-07-01

    Full Text Available Seed is a condensed form of plant. Under suitable environmental conditions, it can resume the metabolic activity from physiological quiescent status, and mobilize the reserves, biosynthesize new proteins, regenerate organelles and cell membrane, eventually protrude the radicle and enter into seedling establishment. So far, how these activities are regulated in a coordinated and sequential manner is largely unknown. With the availability of more and more genome sequence information and the development of mass spectrometry (MS technology, proteomics has been widely applied in analyzing the mechanisms of different biological processes, and proved to be very powerful. Regulation of rice seed germination is critical for rice cultivation. In recent years, a lot of proteomic studies have been conducted in exploring the gene expression regulation, reserves mobilization and metabolisms reactivation, which brings us new insights on the mechanisms of metabolism regulation during this process. Nevertheless, it also invokes a lot of questions. In this mini-review, we summarized the progress in the proteomic studies of rice seed germination. The current challenges and future perspectives were also discussed, which might be helpful for the following studies.

  13. Bio-herbicide effect of salt marsh tolerant Enterobacter sp. I-3 on weed seed germination and seedling growth

    International Nuclear Information System (INIS)

    Radhakrishan, R.; Lee, I.J.

    2017-01-01

    Weeds are major challenges in crop cultivation and cause yield loss. The bacteria based bio-herbicides are emerging against chemical herbicides. This study was aimed to explore the bio-herbicide effect of salt marsh tolerant Enterobacter sp. I-3 on various weed species. The efficacy of I-3 bacterial isolates against weed growth was compared with I-4-5 bacterial strain. The bacterial strains, I-3 and I-4-5 inhibited the seed germination of Cyperus microiria Maxim. Enterobacter sp. I-3 showed higher weed control activity than I-4-5. It was confirmed with growth reduction of C. microiria Maxim. The seed germination of Digitaria sanguinalis L. weed was accelerated during the interaction of I-4-5 and it was drastically declined by I-3 bacterial culture. However, Alopecurus aequalis Sobol. seeds treated with either I-3 or I-4-5 bacterial culture showed no significant germination inhibition. The results of this study suggested that salt marsh tolerant Enterobacter sp. I-3 can be applied as bacterial herbicides to control weeds in agricultural fields. (author)

  14. Influence of diesel fuel on seed germination

    International Nuclear Information System (INIS)

    Adam, Gillian; Duncan, Harry

    2002-01-01

    The volatile fraction of diesel fuel played a major role in delaying seed emergence and reducing percentage germination. - The use of plant-based systems to remediate contaminated soils has become an area of intense scientific study in recent years and it is apparent that plants which grow well in contaminated soils need to be identified and screened for use in phytoremediation technologies. This study investigated the effect of diesel fuel on germination of selected plant species. Germination response varied greatly with plant species and was species specific, as members of the same plant family showed differential sensitivity to diesel fuel contamination. Differences were also seen within plant subspecies. At relatively low levels of diesel fuel contamination, delayed seed emergence and reduced percentage germination was observed for the majority of plant species investigated. Results suggest the volatile fraction of diesel fuel played an influential role in delaying seed emergence and reducing percentage germination. In addition, the remaining diesel fuel in the soil added to this inhibitory effect on germination by physically impeding water and oxygen transfer between the seed and the surrounding soil environment, thus hindering the germination response

  15. [Study on germination characteristics of Disporum cantoniense].

    Science.gov (United States)

    Huang, Nan; Wang, Hua-Lei; Zhao, Zhi; Liu, Hong-Chang; Luo, Chun-Li; Li, Jin-Ling; Luo, Fu-Lai; Huang, Ming-Jin

    2012-11-01

    To study the seed germination characteristic and optimal germination condition of wild Disporum cantoniense. Used wild Disporum cantoniense seed as the test materials, the rate of water absorption of the seed was determined. The germination rates under different conditions, along a temperature gradient (15, 20, 25 and 30 degres C), in light or dark, on top or between wet filter papers, and keeping or removing the seed coat, were determined respectively using petri dish method. At the same time germination trends were observed. The thousand seed weight was 33.24 g, and the seed water-absorbing reached saturation pot after soaking for 30 h. Higher germination rates were respectively recorded at 25 degrees C, between filter papers, and in dark after 24 h soaking in the pretreatment solution. The optimal condition for the germination of the seed of wild Disporum cantoniense is as follow: keeping testa, seed soaking for 24 h in seed germination agent and being incubated between wet filter papers in dark at 25 degrees C.

  16. Germination of beans and snap beans seed

    Directory of Open Access Journals (Sweden)

    Zdravković Milan

    2000-01-01

    Full Text Available The aim of this study was to investigate germination of good bean seed of the variety Galeb and the bad bean seed of the same variety. We were also interested in germination of bean and snap bean seed damaged by grain weevil, and in germination of the seed treated by freezing which was aimed at controlling grain weevil by cold. We also recorded the differences between bean and snap bean seed, which was or was not treated by freezing in laboratory conditions. This investigation was carried out by applying the two factorial block system. The obtained results were evaluated by the variance analysis and x2 test These results suggest that the bean seed of a bad fraction had low levels of germination, but still it was present. Although the seed of good appearance was carefully selected, germination was slightly lower than it should have been. The seed with the large amount of grain weevils performed a high level germination in laboratory conditions. There were no differences in germination between the seed injured by grain weevil either in beans or in snap beans. As for the seed treated or untreated by freezing, there also were no differences between beans and snap beans. .

  17. The oxygen requirement of germinating flax seeds

    Science.gov (United States)

    Kuznetsov, O.; Hasenstein, K.

    Experiments for earth orbit are typically prepared on the ground and often germinated in orbit in order to study gravity effects on developing seedlings. Germination requires the breakdown of storage compounds and respiration. In orbit the formation of a water layer around the seed may further limit oxygen availability. Therefore, the oxygen content of the available gas volume is one of the limiting factors for seed germination. In preparation for an upcoming shuttle experiment (MICRO on STS-107) we studied germination and growth of flax (Linum usitatissimum L.) seedlings in the developed hardware. We tested per seed chamber (gas volume = 14 mL, O2 = 2.9 mL) between 4 to 32 seeds glued to germination paper by 1% (w/v) gum guar. A lexan cover and a gasket hermetically sealed each of the eight chambers. For imbibition of the seeds a previously optimized amount of distilled water was dispensed through sealed inlets. The seedlings were allowed to grow for either 32 to 48 h on a clinostat or without microgravity simulation. Then their root length was measured. With 32 seeds per chamber, four times the intended number of seeds for the flight, the germination rate decreased from 94 to 69%, and the root length was reduced by 20%. Experiments on the germination and root length in controlled atmospheres (5, 10, 15 and 21% O2 ) suggest that germination and growth for two days requires about 200 :l of O (1 mL air) per seed. Our2 experiments correlate oxygen dependency from seed mass and germination temperature, and analyze accumulation of gaseous metabolites (supported by NASA grant NAG10-0190).

  18. Stimulation of lettuce seed germination by ethylene.

    Science.gov (United States)

    Abeles, F B; Lonski, J

    1969-02-01

    Ethylene increased the germination of freshly imbibed lettuce (Lactuca sativa L. var. Grand Rapids) seeds. Seeds receiving either red or far-red light or darkness all showed a positive response to the gas. However, ethylene was apparently without effect on dormant seeds, those which failed to germinate after an initial red or far-red treatment. Carbon dioxide, which often acts as a competitive inhibitor of ethylene, failed to clearly reverse ethylene-enhanced seed germination. While light doubled ethylene production from the lettuce seeds, its effect was not mediated by the phytochrome system since both red and far-red light had a similar effect.

  19. 7 CFR 201.54 - Number of seeds for germination.

    Science.gov (United States)

    2010-01-01

    ... REGULATIONS Germination Tests in the Administration of the Act § 201.54 Number of seeds for germination. At least 400 seeds shall be tested for germination; except that in mixtures, 200 seeds of each of those... 7 Agriculture 3 2010-01-01 2010-01-01 false Number of seeds for germination. 201.54 Section 201.54...

  20. Phytotoxicity of glyphosate in the germination of Pisum sativum and its effect on germinated seedlings

    OpenAIRE

    Mondal, Subinoy; Kumar, Mousumi; Haque, Smaranya; Kundu, Debajyoti

    2017-01-01

    The present study evaluated the effects of glyphosate on Pisum sativum germination as well as its effect on the physiology and biochemistry of germinated seedlings. Different physico-chemical biomarkers, viz., chlorophyll, root and shoot length, total protein and soluble sugar, along with sodium and potassium concentration, were investigated in germinated seedlings at different glyphosate concentrations. This study reports the influence of different concentrations of glyphosate on pea seeds a...

  1. Factors Affecting the Germination of Akinetes of Nodularia spumigena (Cyanobacteriaceae)

    OpenAIRE

    Huber, Ann L.

    1985-01-01

    Nutritional and physical factors which influence the germination of akinetes of Nodularia spumigena (Cyanobacteriaceae) were examined. Low concentrations of phosphorus (45 μM, inhibited germination. Salinities of >20‰ were inhibitory to germination. Optimum temperatures were 22°C or greater. Germination did not take place in the dark, but only very low light intensities (0.5 microeinstein m−2 s−1) were necessary to initiate germination. Red light (620 to 665 nm) was required. More than 24 h o...

  2. Imbibition and germination in the seeds of Heliotropium supinum L.

    Directory of Open Access Journals (Sweden)

    Ramesh C. Bhatia

    2014-01-01

    Full Text Available Imbibition in the seeds of Heliotropium supinum L. varies under different temperatures. The optimum temperatures for imbibition and germination are also different. For germination 39% imbibition is essential, and this capability is achieved by 12-week-old seeds. With duration of dry storage imbibition increases. The imbibition and germination percentages decline on re-dry storage of seeds after embeding in mud. A soil moisture of 44% is optimal for germination. A correlation exists between imbibition and germination.

  3. Bacterial surface adaptation

    Science.gov (United States)

    Utada, Andrew

    2014-03-01

    Biofilms are structured multi-cellular communities that are fundamental to the biology and ecology of bacteria. Parasitic bacterial biofilms can cause lethal infections and biofouling, but commensal bacterial biofilms, such as those found in the gut, can break down otherwise indigestible plant polysaccharides and allow us to enjoy vegetables. The first step in biofilm formation, adaptation to life on a surface, requires a working knowledge of low Reynolds number fluid physics, and the coordination of biochemical signaling, polysaccharide production, and molecular motility motors. These crucial early stages of biofilm formation are at present poorly understood. By adapting methods from soft matter physics, we dissect bacterial social behavior at the single cell level for several prototypical bacterial species, including Pseudomonas aeruginosa and Vibrio cholerae.

  4. Investigation of coriander germination (Coriandrum sativum L.

    Directory of Open Access Journals (Sweden)

    Aćimović Milica

    2013-01-01

    Full Text Available Coriander seed yield (Coriandrum sativum L. depends of many factors during vegetation period, and also depend of seed quality. Coriander fruit (Coriandri fructus which is used like spice and in medicinal purpose, and also in food and pharmacy, in the same time is and seed material. Because of that, it is very important to take care about its quality. In this paper is analyzed seed material obtained from field experiments village Mošorin, in 2011, and investigated was conducted in harvest year, and one year later. In harvest year, germination energy in average was 38,21%, and total germination 72,75%. After one year, germination energy was statistically significant smaller - 16,50%, as like total germination which was 67,42%.

  5. Freezing tolerance of conifer seeds and germinants.

    Science.gov (United States)

    Hawkins, B J; Guest, H J; Kolotelo, D

    2003-12-01

    Survival after freezing was measured for seeds and germinants of four seedlots each of interior spruce (Picea glauca x engelmannii complex), lodgepole pine (Pinus contorta Dougl. ex Loud.), Douglas-fir (Pseudotsuga menziesii (Mirb.) Franco) and western red cedar (Thuja plicata Donn ex D. Donn). Effects of eight seed treatments on post-freezing survival of seeds and germinants were tested: dry, imbibed and stratified seed, and seed placed in a growth chamber for 2, 5, 10, 15, 20 or 30 days in a 16-h photoperiod and a 22/17 degrees C thermoperiod. Survival was related to the water content of seeds and germinants, germination rate and seedlot origin. After freezing for 3 h at -196 degrees C, dry seed of most seedlots of interior spruce, Douglas-fir and western red cedar had 84-96% germination, whereas lodgepole pine seedlots had 53-82% germination. Freezing tolerance declined significantly after imbibition in lodgepole pine, Douglas-fir and interior spruce seed (western red cedar was not tested), and mean LT50 of imbibed seed of these species was -30, -24.5 and -20 degrees C, respectively. Freezing tolerance continued to decline to a minimum LT50 of -4 to -7 degrees C after 10 days in a growth chamber for interior spruce, Douglas-fir and lodgepole pine, or after 15 days for western red cedar. Minimum freezing tolerance was reached at the stage of rapid hypocotyl elongation. In all species, a slight increase in freezing tolerance of germinants was observed once cotyledons emerged from the seed coat. The decrease in freezing tolerance during the transition from dry to germinating seed correlated with increases in seed water content. Changes in freezing tolerance between 10 and 30 days in the growth chamber were not correlated with seedling water content. Within a species, seedlots differed significantly in freezing tolerance after 2 or 5 days in the growth chamber. Because all seedlots of interior spruce and lodgepole pine germinated quickly, there was no correlation

  6. Seed germination and sowing options [Chapter 8

    Science.gov (United States)

    Tara Luna; Kim Wilkinson; R. Kasten Dumroese

    2009-01-01

    Seeds of many native species are challenging to germinate. One important thing a grower can do is learn as much as possible about the life history, ecology, and habitat of the species they wish to grow.What processes do seeds of this species go through in nature? Any observations will be valuable when trying to germinate and grow species that have little or no...

  7. Oxygen dependency of germinating Brassica seeds

    Science.gov (United States)

    Park, Myoung Ryoul; Hasenstein, Karl H.

    2016-02-01

    Establishing plants in space, Moon or Mars requires adaptation to altered conditions, including reduced pressure and composition of atmospheres. To determine the oxygen requirements for seed germination, we imbibed Brassica rapa seeds under varying oxygen concentrations and profiled the transcription patterns of genes related to early metabolism such as starch degradation, glycolysis, and fermentation. We also analyzed the activity of lactate dehydrogenase (LDH) and alcohol dehydrogenase (ADH), and measured starch degradation. Partial oxygen pressure (pO2) greater than 10% resulted in normal germination (i.e., protrusion of radicle about 18 hours after imbibition) but lower pO2 delayed and reduced germination. Imbibition in an oxygen-free atmosphere for three days resulted in no germination but subsequent transfer to air initiated germination in 75% of the seeds and the root growth rate was transiently greater than in roots germinated under ambient pO2. In hypoxic seeds soluble sugars degraded faster but the content of starch after 24 h was higher than at ambient oxygen. Transcription of genes related to starch degradation, α-amylase (AMY) and Sucrose Synthase (SUS), was higher under ambient O2 than under hypoxia. Glycolysis and fermentation pathway-related genes, glucose phosphate isomerase (GPI), 6-phosphofructokinase (PFK), fructose 1,6-bisphosphate aldolase (ALD), glyceraldehyde-3-phosphate dehydrogenase (GAPDH), pyruvate decarboxylase (PDC), LDH, and ADH, were induced by low pO2. The activity of LDH and ADH was the highest in anoxic seeds. Germination under low O2 conditions initiated ethanolic fermentation. Therefore, sufficient oxygen availability is important for germination before photosynthesis provides necessary oxygen and the determination of an oxygen carrying capacity is important for uniform growth in space conditions.

  8. Mathematical model of seed germination process

    International Nuclear Information System (INIS)

    Gładyszewska, B.; Koper, R.; Kornarzyński, K.

    1999-01-01

    An analytical model of seed germination process was described. The model based on proposed working hypothesis leads - by analogy - to a law corresponding with Verhulst-Pearl's law, known from the theory of population kinetics. The model was applied to describe the germination kinetics of tomato seeds, Promyk field cultivar, biostimulated by laser treatment. Close agreement of experimental and model data was obtained [pl

  9. Multiple paths to similar germination behavior in Arabidopsis thaliana.

    Science.gov (United States)

    Burghardt, Liana T; Edwards, Brianne R; Donohue, Kathleen

    2016-02-01

    Germination timing influences plant fitness, and its sensitivity to temperature may cause it to change as climate shifts. These changes are likely to be complex because temperatures that occur during seed maturation and temperatures that occur post-dispersal interact to define germination timing. We used the model organism Arabidopsis thaliana to determine how flowering time (which defines seed-maturation temperature) and post-dispersal temperature influence germination and the expression of genetic variation for germination. Germination responses to temperature (germination envelopes) changed as seeds aged, or after-ripened, and these germination trajectories depended on seed-maturation temperature and genotype. Different combinations of genotype, seed-maturation temperature, and after-ripening produced similar germination envelopes. Likewise, different genotypes and seed-maturation temperatures combined to produce similar germination trajectories. Differences between genotypes were most likely to be observed at high and low germination temperatures. The germination behavior of some genotypes responds weakly to maternal temperature but others are highly plastic. We hypothesize that weak dormancy induction could synchronize germination of seeds dispersed at different times. By contrast, we hypothesize that strongly responsive genotypes may spread offspring germination over several possible germination windows. Considering germination responses to temperature is important for predicting phenology expression and evolution in future climates. © 2015 The Authors. New Phytologist © 2015 New Phytologist Trust.

  10. Mean germination time and germination rate of oat seeds subjected to stationary magnetic field

    International Nuclear Information System (INIS)

    Martinez Ramirez, Elvira; Florez Garcia, Mercedes; Carbonell, Maria Victoria; Amaya Garcia de la Escosura, Jose Manuel

    2007-01-01

    The objective of the present study is to determine and quantify the effect produced by stationary magnetic fields on oat seed germination (Avena sativa, L. var. c obena ) . For this purpose, seeds were exposed to a magnetic field 125 mT of 250 mT during different periods of time: 20 minutes (E1, E5), 1 hour (E2, E6), 24 hours (E3, E7), or in a conic form (E4, E8) during the whole germination process. Germination tests were carried out under laboratory conditions with cylindrical magnets to obtain the magnetic field. For magnetic treatment seed on Petri dishes were placed on magnets during time necessary for each treatment. Seeds without exposition to the magnetic field were used as control group. Parameters used for germination speed analysis were: number of germinated seeds (G), mean germination time (MGT) and necessary time for germination of 1, 10, 25, 50 and 75% of N number of speeds used for each treatment (T1, T10, T25, T50, and T75). These parameters were supplied through the software Seed calculator, as well as the corresponding germination curves. In general, from the results obtained it can be said that the time required to obtain different germination percentages was lower for seeds exposed to the magnetic field (treatments E1 and E8). Reduction in time for E1 treatment stands up with 20 a minutes-exposition-time to 125 mT. MGT obtained for seeds with magnetic treatment E1 was significantly lower (11.48%) than the control group. Parameters T1, T10, T25 were also lower for seeds submitted to treatment, obtaining reductions of 46.62 %, 24.02 % and 13.46 % respectively. Reduction in germination parameters indicates that germination speed is higher. Because parameters T1 and T10 are related to the beginning of germination, this study represents a progress in germination and a reduction in the induction phase in most of the magnetic treatments applied. Previous studies done by authors about the influence of stationary magnetic fields have shown increases in

  11. Seed Germination Ecology of the Cold Desert Annual Isatis violascens (Brassicaceae: Two Levels of Physiological Dormancy and Role of the Pericarp.

    Directory of Open Access Journals (Sweden)

    Yuan M Zhou

    Full Text Available The occurrence of various species of Brassicaceae with indehiscent fruits in the cold deserts of NW China suggests that there are adaptive advantages of this trait. We hypothesized that the pericarp of the single-seeded silicles of Isatis violascens restricts embryo expansion and thus prevents germination for 1 or more years. Thus, our aim was to investigate the role of the pericarp in seed dormancy and germination of this species. The effects of afterripening, treatment with gibberellic acid (GA3 and cold stratification on seed dormancy-break were tested using intact silicles and isolated seeds, and germination phenology was monitored in an experimental garden. The pericarp has a role in mechanically inhibiting germination of fresh seeds and promotes germination of nondormant seeds, but it does not facilitate formation of a persistent seed bank. Seeds in silicles in watered soil began to germinate earlier in autumn and germinated to higher percentages than isolated seeds. Sixty-two percent of seeds in the buried silicles germinated by the end of the first spring, and only 3% remained nongerminated and viable. Twenty to twenty-five percent of the seeds have nondeep physiological dormancy (PD and 75-80% intermediate PD. Seeds with nondeep PD afterripen in summer and germinate inside the silicles in autumn if the soil is moist. Afterripening during summer significantly decreased the amount of cold stratification required to break intermediate PD. The presence of both nondeep and intermediate PD in the seed cohort may be a bet-hedging strategy.

  12. Germination of Avena fatua under different gaseous environments

    Energy Technology Data Exchange (ETDEWEB)

    Hart, J.W.; Berrie, A.M.M.

    1966-01-01

    The atmosphere in which seeds germinate can profoundly affect the level of germination and dormancy. Seeds were germinated in atmospheres containing various concentrations of carbon dioxide and oxygen. At the same time the effect of light on these systems was examined. The germination of partially dormant populations of wild oat seed is inhibited by white light. This response to light is most apparent when the caryopsis is enclosed in the pales. Investigations into the effect of the ambient atmosphere on germination have indicated that, while oxygen is a necessary factor in the germination of this species, carbon dioxide also has an effect. A lack of carbon dioxide increases the degree of light inhibition of germination; 3% carbon dioxide (by volume) allows germination in light; 20% carbon dioxide inhibits germination in light and darkness at all tested oxygen concentrations.

  13. Effects of fungicides and bactericides on orchid seed germination and shoot tip cultures in vitro

    OpenAIRE

    Brown, DM; Groom, CL; Cvitanik, M; Brown, M; Cooper, JL; Arditti, J

    1981-01-01

    Amphotericin B, benomyl, gentamycin, nystatin, quintozene penicillin G, sodium omadine, and vancomycin singly and in several combinations have no deleterious effects on the germination of orchid seeds, but inhibit the growth in vitro of shoot tip explants. © 1981 Martinus Nijhoff/Dr W. Junk Publishers.

  14. Effects of Wood Pollution on Pore-Water Sulfide Levels and Eelgrass Germination

    Science.gov (United States)

    Ekelem, C.

    2016-02-01

    Historically, sawmills released wood waste onto coastal shorelines throughout the Pacific Northwest of the USA, enriching marine sediments with organic material. The increase in organic carbon boosts the bacterial reduction of sulfate and results in the production of a toxic metabolite, hydrogen sulfide. Hydrogen sulfide is a phytotoxin and can decrease the growth and survival of eelgrass. This is a critical issue since eelgrass, Zostera marina, forms habitat for many species, stabilizes sediment, and plays a role in nutrient cycling and sediment chemistry. The objective of our study was to determine the effects of wood debris on sediment pore-water hydrogen sulfide concentrations and eelgrass germination. To test the impact of wood inputs on sulfide production and seed germination, we conducted a laboratory mesocosm experiment, adding sawdust to marine sediments and measuring the sulfide levels weekly. We subsequently planted seeds in the mesocosms and measured germination rates. Higher concentrations of sawdust led to higher levels of pore-water hydrogen sulfide and drastically slower eelgrass germination rates. Treatments with greater than 10% wood enrichment developed free sulfide concentrations of 0.815 (± 0.427) mM after 118 days, suggesting sediments with greater than 10% wood pollution may have threateningly high pore-water hydrogen sulfide levels. These results can be used to set thresholds for remediation efforts and guide seed distribution in wood polluted areas.

  15. Bacterial prostatitis.

    Science.gov (United States)

    Gill, Bradley C; Shoskes, Daniel A

    2016-02-01

    The review provides the infectious disease community with a urologic perspective on bacterial prostatitis. Specifically, the article briefly reviews the categorization of prostatitis by type and provides a distillation of new findings published on bacterial prostatitis over the past year. It also highlights key points from the established literature. Cross-sectional prostate imaging is becoming more common and may lead to more incidental diagnoses of acute bacterial prostatitis. As drug resistance remains problematic in this condition, the reemergence of older antibiotics such as fosfomycin, has proven beneficial. With regard to chronic bacterial prostatitis, no clear clinical risk factors emerged in a large epidemiological study. However, bacterial biofilm formation has been associated with more severe cases. Surgery has a limited role in bacterial prostatitis and should be reserved for draining of a prostatic abscess or the removal of infected prostatic stones. Prostatitis remains a common and bothersome clinical condition. Antibiotic therapy remains the basis of treatment for both acute and chronic bacterial prostatitis. Further research into improving prostatitis treatment is indicated.

  16. Cyrtopodium paludicolum germination with two Tulasnella isolates

    Directory of Open Access Journals (Sweden)

    Otieres Cirino de Carvalho

    2017-11-01

    Full Text Available ABSTRACT Symbiosis between orchid seeds and mycorrhizal fungi has been reported to be a determining factor in the success of germination and protocorm development in vitro. The aim of this study was to isolate and identify by molecular analysis the mycorrhizal fungus associated with Cyrtopodium paludicolum, and to evaluate its efficiency in facilitating seed germination and development. Germination experiments were carried out using a fungus isolated from C. paludicolum (CH01 and Epidendrum secundum (M65, which has been successfully used a number of times in symbiotic germination. The experiments were conducted in a completely randomized design with treatments of CH01, M65 as well as under asymbiotic conditions. The mycobiont CH01 was successfully isolated from Cyrtopodium paludicolum and identified as Tulasnella sp. Treatments with both fungi reached a higher germination percentage than under asymbiotic conditions, indicating no specificity in the relationship between Cyrtopodium paludicolum and the fungi. The results presented have the potential to advance research into the propagation and conservation of C. paludicolum, a native of the Cerrado biome.

  17. Implicitly defined criteria for vector optimization in technological process of hydroponic germination of wheat grain

    Science.gov (United States)

    Koneva, M. S.; Rudenko, O. V.; Usatikov, S. V.; Bugaets, N. A.; Tereshchenko, I. V.

    2018-05-01

    To reduce the duration of the process and to ensure the microbiological purity of the germinated material, an improved method of germination has been developed based on the complex use of physical factors: electrochemically activated water (ECHA-water), electromagnetic field of extremely low frequencies (EMF ELF) with round-the-clock artificial illumination by LED lamps. The increase in the efficiency of the "numerical" technology for solving computational problems of parametric optimization of the technological process of hydroponic germination of wheat grains is considered. In this situation, the quality criteria are contradictory and part of them is given by implicit functions of many variables. A solution algorithm is offered without the construction of a Pareto set in which a relatively small number of elements of a set of alternatives is used to obtain a linear convolution of the criteria with given weights, normalized to their "ideal" values from the solution of the problems of single-criterion private optimizations. The use of the proposed mathematical models describing the processes of hydroponic germination of wheat grains made it possible to intensify the germination process and to shorten the time of obtaining wheat sprouts "Altayskaya 105" for 27 hours.

  18. Bacterial Vaginosis

    Science.gov (United States)

    ... Archive STDs Home Page Bacterial Vaginosis (BV) Chlamydia Gonorrhea Genital Herpes Hepatitis HIV/AIDS & STDs Human Papillomavirus ( ... of getting other STDs, such as chlamydia and gonorrhea . These bacteria can sometimes cause pelvic inflammatory disease ( ...

  19. Combining Ability for Germination Traits in Jatropha curcas L.

    Directory of Open Access Journals (Sweden)

    A. K. M. Aminul Islam

    2013-01-01

    Full Text Available Six parents of Jatropha curcas were crossed in half diallel fashion, and the F1s were evaluated to determine the combining ability for nine germination parameters. The ratio between general combining ability (GCA and specific combining ability (SCA variances indicated preponderance of additive gene action for all the characters except germination percentage, time of 50% germination, seedling length, and seedling vigor index. The parents P1 and P2 were the best general combiner for most of the characters studied. The cross P1×P5 was the best specific combiner for speed of emergence, germination percentage, germination energy, germination index, and seedling vigor index, the cross P2×P5 for mean germination time, time of 50% germination, and seedling length, and the cross P4×P5 for number of days to first germination. The germination percentage varied from 58.06 to 92.76% among the parents and 53.43 to 98.96% among the hybrids. The highest germination (98.96% was observed in hybrid P2×P4, and none of the hybrids or parents showed 100% germination. The highest germination index (GI and seedling vigor index (SVI were found in hybrid P1×P5 and P2×P5, respectively. The results of this study provide clue for the improvement of Jatropha variety through breeding program.

  20. In Vitro Maturation and Embryo Development to blastocyst Mouse Germinal Vesicle Oocytes after Vitrification

    Directory of Open Access Journals (Sweden)

    M Nikseresht

    2013-05-01

    Full Text Available Abstract Background & aim: Vitrification is a simple and ultra rapid technique for the conservation of fertility. Improving pregnancy rate associate with the use of cryopreserved oocytes would be an important advanced in human assisted reproductive technology (ART. The purpose of this study was to evaluate survival, oocytes maturation and embryo development to the blastocyst stage after vitrification of oocytes germinal vesicle-stage and multi stage Methods: In the present experimental study, germinal vesicle oocytes with or without cumulus cells were transferred to vitrification solution containing 30% (v/v ethylene glycol, 18% (w/v Ficoll-70, and 0.3 M sucrose, either by single step or in a step-wise way. After vitrification and storage in liquid nitrogen, the oocytes were thawed and washed twice in culture medium TCM119, and then subjected to in vitro maturation, fertilization, and culture. Data analysis was performed by using One-way variance and Tukey tests. Results: Oocytes survival, metaphase 2 stage oocyte maturation, fertilization and embryo formed blastocyst in vitrification methods multistage were significantly higher than the single step procedure (P<0/05 Conclusion: The Germinal vesicle stage oocytes vitrified with cumulus cells and stepwise procedure had positive effect on the survival, maturation and developmental rate on blastocyst compared to oocytes without cumulus cell and single step procedure. Key words: Germinal Vesicle Oocyte, Blastocyst, Vitrification, Ethylene glycol

  1. Chickpea seeds germination rational parameters optimization

    Science.gov (United States)

    Safonova, Yu A.; Ivliev, M. N.; Lemeshkin, A. V.

    2018-05-01

    The paper presents the influence of chickpea seeds bioactivation parameters on their enzymatic activity experimental results. Optimal bioactivation process modes were obtained by regression-factor analysis: process temperature - 13.6 °C, process duration - 71.5 h. It was found that in the germination process, the proteolytic, amylolytic and lipolytic enzymes activity increased, and the urease enzyme activity is reduced. The dependences of enzyme activity on chickpea seeds germination conditions were obtained by mathematical processing of experimental data. The calculated data are in good agreement with the experimental ones. This confirms the optimization efficiency based on experiments mathematical planning in order to determine the enzymatic activity of chickpea seeds germination optimal parameters of bioactivated seeds.

  2. Autotoxicity of chard and its allelopathic potentiality on germination ...

    African Journals Online (AJOL)

    SERVER

    2008-04-03

    Apr 3, 2008 ... Abbreviation: (W+C), Wheat germinated with chard; (C+W), chard germinated with ..... hull extracts which have inhibitory effect on the growth of barnyardgrass seedlings. .... John Wiley and Sons,. New York, pp. 171-188.

  3. Potential germination and initial growth of Sclerocarya birrea (A ...

    African Journals Online (AJOL)

    SARAH

    2014-04-30

    Apr 30, 2014 ... Methodology: The parameters studied for the germination test were: latency duration, germination capacity .... for family consumption or in the cosmetic industry. (Murray ... the crowns of trees and in the stall of the animals.

  4. Effect of chromium toxicity on germination and early seedling growth ...

    African Journals Online (AJOL)

    USER

    2010-07-19

    Jul 19, 2010 ... germination and early seedling growth of melon (Cucumis melo L.). Chromium ... chromium on seed germination and seedling growth- biomass in early ..... such critical regulatory mechanisms are likely to operate in seeds at ...

  5. on seed germination and growth of Garcinia kola

    African Journals Online (AJOL)

    SARAH

    2016-07-31

    Jul 31, 2016 ... Parameters related to seed germination and seedlings vigour was evaluated. Results indicated that substrate do not affect seed germination and plant vigour. However ..... Annual plant reviews California, USA, pp. 50-. 6.7.

  6. Studies on seed germination and in vitro shoot multiplication of ...

    African Journals Online (AJOL)

    Yomi

    2011-12-21

    Dec 21, 2011 ... vitro seed germination and plantlet regeneration of this plant. ... Key words: Germination, gibberellic acid, growth regulators, node explants, Satureja ..... Abscisic Acid: A. Seed Maturation and Antistress Signal, 3rd ed. Sinauer ...

  7. Factors Defining Field Germination of Oilseed Radish Seeds

    Directory of Open Access Journals (Sweden)

    N.V. Dorofeev

    2013-08-01

    Full Text Available Influence of temperature, depth of crops and granulometric of soil structure on germination speed, laboratory and field germination of oilseed radish seeds were studied. It was established that the period of seed-germination is defined both by temperature and granulometric structure of soil. The highest field germination was marked on sandy loam at depth of crops' seeds at 3 cm and 20°С.

  8. DOG1-imposed dormancy mediates germination responses to temperature cues

    NARCIS (Netherlands)

    Murphey, M.; Kovach, K.; Elnacash, T.; He, H.; Bentsink, L.; Donohue, K.

    2015-01-01

    Seed dormancy and environment-dependent germination requirements interact to determine the timing of germination in natural environments. This study tested the contribution of the dormancy gene Delay Of Germination 1 (DOG1) to primary and secondary dormancy induction in response to environmental

  9. Monte Carlo simulation of the seed germination process

    International Nuclear Information System (INIS)

    Gladyszewska, B.; Koper, R.

    2000-01-01

    Paper presented a mathematical model of seed germination process based on the Monte Carlo method and theoretical premises resulted from the physiology of seed germination suggesting three consecutive stages: physical, biochemical and physiological. The model was experimentally verified by determination of germination characteristics for seeds of ground tomatoes, Promyk cultivar, within broad range of temperatures (from 15 to 30 deg C)

  10. Factors affecting the germination of hybrid rose achenes

    NARCIS (Netherlands)

    Vries, De D.P.; Dubois, L.A.M.

    2015-01-01

    The smooth germination of mature Hybrid rose achenes is hampered by (i) hardseededness (HS), (ii) primary dormancy (PD) and (iii) germination polymorphism (GP). HS is owing to the hard pericarp. PD is, in principle, a natural phenomenon that protects the seeds from precocious germination. For

  11. Biorhythms in conifer seed germination during extended storage

    Science.gov (United States)

    James P. Barnett; N.I. Marnonov

    1989-01-01

    A proportion of sound seeds of conifer species do not germinate during certain periods of the year, even when conditions are favorable. Mamonov et al. (1986) report that the non-germinating seeds have apparently undergone physiological changes that affected germination. This phenomenon may be due to seasonal periodicity, or biorhythms. As early as the mid-1930'...

  12. Comparison of Germination and Viability Tests for Southern Hardwood Seed

    Science.gov (United States)

    F. T. Bonner; J. L. Gammage

    1967-01-01

    This paper summarizes a 3-year evaluation of 10 methods for testing germinability and viability of the seed of six species of southern hardwood. In five of the methods, the seeds were germinated. In the others, visual, biochemical, or physical properties were the criteria. Cutting tests were best for sweetgum and Nuttall oak seed, while cutting or water germination...

  13. Effect of fungicides on Wyoming big sagebrush seed germination

    Science.gov (United States)

    Robert D. Cox; Lance H. Kosberg; Nancy L. Shaw; Stuart P. Hardegree

    2011-01-01

    Germination tests of Wyoming big sagebrush (Artemisia tridentata Nutt. ssp. wyomingensis Beetle & Young [Asteraceae]) seeds often exhibit fungal contamination, but the use of fungicides should be avoided because fungicides may artificially inhibit germination. We tested the effect of seed-applied fungicides on germination of Wyoming big sagebrush at 2 different...

  14. Asymbiotic germination of immature embryos of a medicinally ...

    African Journals Online (AJOL)

    H.piri

    La germination no simuotica de las semillas de orquideas. Bol. Real. Soc. Esp. Hist. Nat. 21:250-260. Knudson L (1922). Non–symbiotic germination of orchid seeds. Bot. Gaz. 73:1-25. Knudson L (1925). Physiological study of the asymbiotic germination of orchid seeds. Bot. Gaz. 79:345-379. Lawler LJ (1984). Ethnobotany ...

  15. Critical evaluation of post-consumption food waste composting employing thermophilic bacterial consortium.

    Science.gov (United States)

    Awasthi, Mukesh Kumar; Selvam, Ammaiyappan; Lai, Ka Man; Wong, Jonathan W C

    2017-12-01

    Effect of single-function (oil degrading) and multi-functional bacterial consortium with zeolite as additive for post-consumption food waste (PCFW) composting was investigated through assessing the oil content reduction in a computer controlled 20-L composter. Three treatments of PCFWs combined with 10% zeolite were developed: Treatment-2 and Treatment-3 were inoculated with multi-functional (BC-1) and oil degrading bacterial consortium (BC-2), respectively, while T-1 was without bacterial inoculation and served as control. Results revealed that BC-2 inoculated treatment (T-3) was superior to control treatment and marginally better than T-2 in terms of oil degradation. The reduction of oil content was >97.8% in T-3 and 92.27% in T-2, while total organic matter degradation was marginally higher in T-2 (42.95%) than T-3 (41.67%). Other parameters of compost maturity including germination test indicated that T-2 was marginally better than T-3 and significantly enhanced the oily PCFW decomposition and shortened the composting period by 20days. Copyright © 2017 Elsevier Ltd. All rights reserved.

  16. BACTERIAL CONSORTIUM

    Directory of Open Access Journals (Sweden)

    Payel Sarkar

    2013-01-01

    Full Text Available Petroleum aromatic hydrocarbons like benzen e, toluene, ethyl benzene and xylene, together known as BTEX, has almost the same chemical structure. These aromatic hydrocarbons are released as pollutants in th e environment. This work was taken up to develop a solvent tolerant bacterial cons ortium that could degrade BTEX compounds as they all share a common chemical structure. We have isolated almost 60 different types of bacterial strains from different petroleum contaminated sites. Of these 60 bacterial strains almost 20 microorganisms were screene d on the basis of capability to tolerate high concentration of BTEX. Ten differe nt consortia were prepared and the compatibility of the bacterial strains within the consortia was checked by gram staining and BTEX tolerance level. Four successful mi crobial consortia were selected in which all the bacterial strains concomitantly grew in presence of high concentration of BTEX (10% of toluene, 10% of benzene 5% ethyl benzene and 1% xylene. Consortium #2 showed the highest growth rate in pr esence of BTEX. Degradation of BTEX by consortium #2 was monitored for 5 days by gradual decrease in the volume of the solvents. The maximum reduction observed wa s 85% in 5 days. Gas chromatography results also reveal that could completely degrade benzene and ethyl benzene within 48 hours. Almost 90% degradation of toluene and xylene in 48 hours was exhibited by consortium #2. It could also tolerate and degrade many industrial solvents such as chloroform, DMSO, acetonitrile having a wide range of log P values (0.03–3.1. Degradation of aromatic hydrocarbon like BTEX by a solvent tolerant bacterial consortium is greatly significant as it could degrade high concentration of pollutants compared to a bacterium and also reduces the time span of degradation.

  17. Fate of Salmonella enterica and Enterohemorrhagic Escherichia coli Cells Artificially Internalized into Vegetable Seeds during Germination.

    Science.gov (United States)

    Liu, Da; Cui, Yue; Walcott, Ronald; Chen, Jinru

    2018-01-01

    Vegetable seeds contaminated with bacterial pathogens have been linked to fresh-produce-associated outbreaks of gastrointestinal infections. This study was undertaken to observe the physiological behavior of Salmonella enterica and enterohemorrhagic Escherichia coli (EHEC) cells artificially internalized into vegetable seeds during the germination process. Surface-decontaminated seeds of alfalfa, fenugreek, lettuce, and tomato were vacuum-infiltrated with four individual strains of Salmonella or EHEC. Contaminated seeds were germinated at 25°C for 9 days, and different sprout/seedling tissues were microbiologically analyzed every other day. The internalization of Salmonella and EHEC cells into vegetable seeds was confirmed by the absence of pathogens in seed-rinsing water and the presence of pathogens in seed homogenates after postinternalization seed surface decontamination. Results show that 317 (62%) and 343 (67%) of the 512 collected sprout/seedling tissue samples were positive for Salmonella and EHEC, respectively. The average Salmonella populations were significantly larger ( P seed coat tissues, followed by the root tissues, but the mean EHEC populations from all sampled tissue sections were statistically similar, except in pregerminated seeds. Three Salmonella and two EHEC strains had significantly larger cell populations on sprout/seedling tissues than other strains used in the study. Salmonella and EHEC populations from fenugreek and alfalfa tissues were significantly larger than those from tomato and lettuce tissues. The study showed the fate of internalized human pathogens on germinating vegetable seeds and sprout/seedling tissues and emphasized the importance of using pathogen-free seeds for sprout production. IMPORTANCE The internalization of microorganisms into vegetable seeds could occur naturally and represents a possible pathway of vegetable seed contamination by human pathogens. The present study investigated the ability of two important

  18. A simple, high throughput method to locate single copy sequences from Bacterial Artificial Chromosome (BAC libraries using High Resolution Melt analysis

    Directory of Open Access Journals (Sweden)

    Caligari Peter DS

    2010-05-01

    Full Text Available Abstract Background The high-throughput anchoring of genetic markers into contigs is required for many ongoing physical mapping projects. Multidimentional BAC pooling strategies for PCR-based screening of large insert libraries is a widely used alternative to high density filter hybridisation of bacterial colonies. To date, concerns over reliability have led most if not all groups engaged in high throughput physical mapping projects to favour BAC DNA isolation prior to amplification by conventional PCR. Results Here, we report the first combined use of Multiplex Tandem PCR (MT-PCR and High Resolution Melt (HRM analysis on bacterial stocks of BAC library superpools as a means of rapidly anchoring markers to BAC colonies and thereby to integrate genetic and physical maps. We exemplify the approach using a BAC library of the model plant Arabidopsis thaliana. Super pools of twenty five 384-well plates and two-dimension matrix pools of the BAC library were prepared for marker screening. The entire procedure only requires around 3 h to anchor one marker. Conclusions A pre-amplification step during MT-PCR allows high multiplexing and increases the sensitivity and reliability of subsequent HRM discrimination. This simple gel-free protocol is more reliable, faster and far less costly than conventional PCR screening. The option to screen in parallel 3 genetic markers in one MT-PCR-HRM reaction using templates from directly pooled bacterial stocks of BAC-containing bacteria further reduces time for anchoring markers in physical maps of species with large genomes.

  19. Proteomics of Arabidopsis seed germination and priming

    NARCIS (Netherlands)

    Gallardo, K.; Job, C.; Groot, S.P.C.; Puype, M.; Demol, H.; Vandekerckhove, J.; Job, D.

    2003-01-01

    To better understand seed germination, a complex developmental process, we developed a proteome analysis of the model plant Arabidopsis for which complete genome sequence is now available. Among about 1,300 total seed proteins resolved in two-dimensional gels, changes in the abundance (up- and

  20. Seed dormancy and germination : light and nitrate

    NARCIS (Netherlands)

    Hilhorst, H.W.M.

    1990-01-01

    One of the most important aspects of the life cycle of seed plants is the formation and development of seeds on the motherplant and the subsequent dispersal. An equally important element of the survival strategy is the ability of seeds to prevent germination in unfavorable

  1. Changes in germination characteristics and seedling growth ...

    African Journals Online (AJOL)

    Yomi

    2012-03-06

    Mar 6, 2012 ... Priming provides controlled hydration of seeds to a level ... water but drying them before complete germination. .... compared with the control, although, this difference was ... membrane damage, and restores germ inability to aged .... lipid per oxidation in bitter gourd seeds and effects of priming and hot.

  2. Unravelling desiccation tolerance in germinated Arabidopsis seeds

    NARCIS (Netherlands)

    Maia de Oliveira, J.

    2014-01-01

    How different organisms survive in the absence or under very limited amounts of water is still an open question. The aim of the research presented in this thesis is to explore the molecular basis of desiccation tolerance in seeds. We investigated the possibilities of using germinated desiccation

  3. Seed priming with antioxidants improves sunflower seed germination and seedling growth under unfavorable germination conditions

    OpenAIRE

    DRAGANIC, Ivana; LEKIC, Slavoljub

    2012-01-01

    The results of studying the effects of sunflower seed priming with an aqueous solution of ascorbic acid (A), tocopherol (T), and glutathione (G) performed prior to accelerated ageing and a cold test are presented in this paper. Germination, the percentage of abnormal seedlings, and the lengths of both roots and shoots were monitored. The results showed that the cold test caused a drastic drop in germination, an adverse effect on the shoot length, an increase in the percentage of abnormal seed...

  4. Phytotoxicity of glyphosate in the germination of and its effect on germinated seedlings

    Directory of Open Access Journals (Sweden)

    Subinoy Mondal

    2017-08-01

    Full Text Available The present study evaluated the effects of glyphosate on Pisum sativum germination as well as its effect on the physiology and biochemistry of germinated seedlings. Different physico-chemical biomarkers, viz., chlorophyll, root and shoot length, total protein and soluble sugar, along with sodium and potassium concentration, were investigated in germinated seedlings at different glyphosate concentrations. This study reports the influence of different concentrations of glyphosate on pea seeds and seedlings. Physicochemical biomarkers were significantly changed by glyphosate exposure after 15 days. The germination of seedlings under control conditions (0 mg/L was 100% after 3 days of treatment but at 3 and 4 mg/L glyphosate, germination was reduced to 55 and 40%, respectively. Physiological parameters like root and shoot length decreased monotonically with increasing glyphosate concentration, at 14 days of observation. Average root and shoot length (n=30 in three replicates were reduced to 14.7 and 17.6%, respectively, at 4 mg/L glyphosate. Leaf chlorophyll content also decreased, with a similar trend to root and shoot length, but the protein content initially decreased and then increased with an increase in glyphosate concentration to 3 mg/L. The study suggests that glyphosate reduces the soluble sugar content significantly, by 21.6% (v/v. But internal sodium and potassium tissue concentrations were significantly altered by glyphosate exposure with increasing concentrations of glyphosate. Biochemical and physiological analysis also supports the inhibitory effect of glyphosate on seed germination and biochemical effects on seedlings.

  5. The size and germination of eggplant seed in relation to fruit maturity at harvest, after-ripening and ethylene application

    Directory of Open Access Journals (Sweden)

    Despoina MAKROGIANNI

    2010-11-01

    Full Text Available In eggplant cultivars Black Beauty, Emi, Long Negro and Tsakoniki cultivated for seed, flower induction and flower weight decreased in the presence of developing fruit on the plant. Harvesting prior to maturity (25-35 days after anthesis, aimed at increasing flower induction and fruit set, resulted in small seeds that failed to germinate or germinated poorly. When these fruit were stored for 20 days at 25±30C before seed extraction, seed size and germination increased indicating seed filling and maturation (‘after-ripening’ within the harvested fruit. In year 1, a single application of ethylene before storage increased the germination of Black Beauty and Long Negro harvested 25-35 days after anthesis, but reduced that of Emi and Tsakoniki. In year 2, ethylene application once before the storage of fruits harvested 35 days after anthesis promoted the germination of Tsakoniki and Emi, and when ethylene was applied three times germination was increased further. The possible applications of early harvest, fruit storage prior to seed extraction and ethylene treatment to eggplant seed production are discussed.

  6. Chemical inhibitors of viviparous germination in the fruit of watermelon.

    Science.gov (United States)

    Kobayashi, Yoshiki; Nabeta, Kensuke; Matsuura, Hideyuki

    2010-09-01

    It is well known that the seeds of watermelon [Citrullus lanatus (Thunb.) Matsum and Nakai] have a high potential to germinate when the fruit has ripened. When removed from the mature fruit, the seeds can germinate under appropriate conditions. However, it is unclear why they cannot germinate in the flesh of the fruit. Here, we show that cis-ABA and its β-D-glucopyranosyl ester (ABA-β-GE) accumulate in the flesh of the fruit at levels high enough to inhibit seed germination. This result indicates the existence of chemical factors that inhibit viviparous seed germination of watermelon.

  7. Smoke-induced seed germination in California chaparral

    Science.gov (United States)

    Keeley, J.E.; Fotheringham, C.J.

    1998-01-01

    The California chaparral community has a rich flora of species with different mechanisms for cuing germination to postfire conditions. Heat shock triggers germination of certain species but has no stimulatory effect on a great many other postfire species that are chemically stimulated by combustion products. Previous reports have shown that charred wood will induce germination, and here we report that smoke also induces germination in these same species. Smoke is highly effective, often inducing 100% germination in deeply dormant seed populations with 0% control germination. Smoke induces germination both directly and indirectly by aqueous or gaseous transfer from soil to seeds. Neither nitrate nor ammonium ions were effective in stimulating germination of smoke-stimulated species, nor were most of the quantitatively important gases generated by biomass smoke. Nitrogen dioxide, however, was very effective at inducing germination in Caulanthus heterophyllus (Brassicaceae), Emmenanthe penduliflora (Hydrophyllaceae), Phacelia grandiflora (Hydrophyllaceae), and Silene multinervia (Caryophyllaceae). Three species, Dendromecon rigida (Papaveraceae), Dicentra chrysantha, and Trichostema lanatum (Lamiaceae), failed to germinate unless smoke treatment was coupled with prior treatment of 1 yr soil storage. Smoke-stimulated germination was found in 25 chaparral species, representing 11 families, none of which were families known for heat-shock-stimulated germination. Seeds of smoke-stimulated species have many analogous characteristics that separate them from most heat-shock-stimulated seeds, including: (1) outer seed coats that are highly textured, (2) a poorly developed outer cuticle, (3) absence of a dense palisade tissue in the seed coat, and (4) a subdermal membrane that is semipermeable, allowing water passage but blocking entry of large (molecular mass > 500) solutes. Tentative evidence suggests that permeability characteristics of this subdermal layer are altered by

  8. Bacterial Adhesion & Blocking Bacterial Adhesion

    DEFF Research Database (Denmark)

    Vejborg, Rebecca Munk

    2008-01-01

    , which influence the transition from a planktonic lifestyle to a sessile lifestyle, have been studied. Protein conditioning film formation was found to influence bacterial adhesion and subsequent biofilm formation considerable, and an aqueous extract of fish muscle tissue was shown to significantly...... tract to the microbial flocs in waste water treatment facilities. Microbial biofilms may however also cause a wide range of industrial and medical problems, and have been implicated in a wide range of persistent infectious diseases, including implantassociated microbial infections. Bacterial adhesion...... is the first committing step in biofilm formation, and has therefore been intensely scrutinized. Much however, still remains elusive. Bacterial adhesion is a highly complex process, which is influenced by a variety of factors. In this thesis, a range of physico-chemical, molecular and environmental parameters...

  9. Bacterial meningitis

    NARCIS (Netherlands)

    Heckenberg, Sebastiaan G. B.; Brouwer, Matthijs C.; van de Beek, Diederik

    2014-01-01

    Bacterial meningitis is a neurologic emergency. Vaccination against common pathogens has decreased the burden of disease. Early diagnosis and rapid initiation of empiric antimicrobial and adjunctive therapy are vital. Therapy should be initiated as soon as blood cultures have been obtained,

  10. Bacterial lipases

    NARCIS (Netherlands)

    Jaeger, Karl-Erich; Ransac, Stéphane; Dijkstra, Bauke W.; Colson, Charles; Heuvel, Margreet van; Misset, Onno

    Many different bacterial species produce lipases which hydrolyze esters of glycerol with preferably long-chain fatty acids. They act at the interface generated by a hydrophobic lipid substrate in a hydrophilic aqueous medium. A characteristic property of lipases is called interfacial activation,

  11. Bacterial stress

    Indian Academy of Sciences (India)

    First page Back Continue Last page Graphics. Bacterial stress. Physicochemical and chemical parameters: temperature, pressure, pH, salt concentration, oxygen, irradiation. Nutritional depravation: nutrient starvation, water shortage. Toxic compounds: Antibiotics, heavy metals, toxins, mutagens. Interactions with other cells: ...

  12. A model for quantification of temperature profiles via germination times

    DEFF Research Database (Denmark)

    Pipper, Christian Bressen; Adolf, Verena Isabelle; Jacobsen, Sven-Erik

    2013-01-01

    Current methodology to quantify temperature characteristics in germination of seeds is predominantly based on analysis of the time to reach a given germination fraction, that is, the quantiles in the distribution of the germination time of a seed. In practice interpolation between observed...... time and a specific type of accelerated failure time models is provided. As a consequence the observed number of germinated seeds at given monitoring times may be analysed directly by a grouped time-to-event model from which characteristics of the temperature profile may be identified and estimated...... germination fractions at given monitoring times is used to obtain the time to reach a given germination fraction. As a consequence the obtained value will be highly dependent on the actual monitoring scheme used in the experiment. In this paper a link between currently used quantile models for the germination...

  13. Confirmed Transmission of Bacterial or Fungal Infection to Kidney Transplant Recipients from Donated After Cardiac Death (DCD) Donors in China: A Single-Center Analysis.

    Science.gov (United States)

    Wan, Qiquan; Liu, Huanmiao; Ye, Shaojun; Ye, Qifa

    2017-08-03

    BACKGROUND We aimed to investigate blood and urine cultures of donated after cardiac death (DCD) donors and report the cases of confirmed (proven/probable) transmission of bacterial or fungal infection from donors to kidney recipients. MATERIAL AND METHODS Seventy-eight DCD donors between 2010 and 2016 were included. Sixty-one DCD donors underwent blood cultures and 22 episodes of bacteremias developed in 18 donors. Forty-three donors underwent urine cultures and 14 donors experienced 17 episodes of urinary infections. RESULTS Seven of 154 (4.5%) kidney recipients developed confirmed donor-derived bacterial or fungal infections. Inappropriate use of antibiotics in donor was a risk factor for donor-derived infection (p=0.048). The use of FK506 was more frequent in recipients without donor-derived infection than those with donor-derived infection (p=0.033). Recipients with donor-derived infection were associated with higher mortality and graft loss (42.9% and 28.6%, respectively), when compared with those without donor-derived infection (4.8% each). Three kidney recipients with donor-derived infection died; one death was due to multi-organ failure caused by Candida albicans, and two were related to rupture of the renal artery; two of them did not receive appropriate antimicrobial therapy after infection. CONCLUSIONS Our kidney recipients showed high occurrence rates of donor-derived infection. Recipients with donor-derived infection were associated with higher mortality and graft loss than those without donor-derived infection. The majority of recipients with donor-derived infection who died did not receive appropriate antimicrobial therapy after infection.

  14. In vitro germination of desert rose varieties(

    Directory of Open Access Journals (Sweden)

    Tatiane Lemos Varella

    2015-08-01

    Full Text Available The drought stress resistance is a characteristic of the desert rose and its estimable beauty flowers, which gave it great relevance in the ornamental market. However, the desert rose production and germination is hampered by possible sterility of their male and female flowers and frequent problems in pollination, so the tissue culture is a promising alternative to the propagation of these plants. This study aimed to evaluate the effect of gibberellic acid on four commercial varieties of desert rose (Adenium obesum cultivated in vitro. The seeds of the varieties ‘Orange Pallet’, ‘Carnation violet’, ‘Diamond ring’ and ‘Vermiliont’ were sterilized and inoculated on Water + Agar (T0, medium MS (T1, ½ MS (T2, MS + 0.25 mg L-1 GA3 (T3, MS + 0.5 mg L-1 GA3 (T4, ½ MS + 0.25 mg L-1 GA3 (T5, ½ MS 0.5 mg L-1 GA3 (T6. The seeds germination of A. obesum was initiated on the fourth day of cultivation and on the tenth day was possible to observe the expansion of the cotyledons and leaf expansion with subsequent development of early secondary root. The ‘Orange pallet’ variety germinated 100% of seeds on water + agar and MS ½ + 0.5 mg L-1 of GA3. For ‘Diamond Ring’ and ‘Carnation violet’ the highest rate of germination occurred in treatments MS ½; 0.25 mg L-1 GA3; MS + 0.5 mg L-1 GA3 MS ½ + 0.5 mg L-1 GA3 averaging 80% and 70%, respectively. For ‘Vermiliont’ the best response was in MS and MS ½ + 0.5 mg L-1 GA3 ranging between 70-90% germinated embryos. It was registered different malformations in all treatments like absence of roots and apexes during seedling development. The concentrations of GA3 did not affect significantly the seed germination.

  15. Suicidal germination for parasitic weed control.

    Science.gov (United States)

    Zwanenburg, Binne; Mwakaboko, Alinanuswe S; Kannan, Chinnaswamy

    2016-11-01

    Parasitic weeds of the genera Striga and Orobanche spp. cause severe yield losses in agriculture, especially in developing countries and the Mediterranean. Seeds of these weeds germinate by a chemical signal exuded by the roots of host plants. The radicle thus produced attaches to the root of the host plant, which can then supply nutrients to the parasite. There is an urgent need to control these weeds to ensure better agricultural production. The naturally occurring chemical signals are strigolactones (SLs), e.g. strigol and orobanchol. One option to control these weeds involves the use of SLs as suicidal germination agents, where germination takes place in the absence of a host. Owing to the lack of nutrients, the germinated seeds will die. The structure of natural SLs is too complex to allow multigram synthesis. Therefore, SL analogues are developed for this purpose. Examples are GR24 and Nijmegen-1. In this paper, the SL analogues Nijmegen-1 and Nijmegen-1 Me were applied in the field as suicidal germination agents. Both SL analogues were formulated using an appropriate EC-approved emulsifier (polyoxyethylene sorbitol hexaoleate) and applied to tobacco (Nicotiana tabacum L.) fields infested by Orobanche ramosa L. (hemp broomrape), following a strict protocol. Four out of 12 trials showed a reduction in broomrape of ≥95%, two trials were negative, two showed a moderate result, one was unclear and in three cases there was no Orobanche problem in the year of the trials. The trial plots were ca 2000 m 2 ; half of that area was treated with stimulant emulsion, the other half was not treated. The optimal amount of stimulant was 6.25 g ha -1 . A preconditioning prior to the treatment was a prerequisite for a successful trial. In conclusion, the suicidal germination approach to reducing O. ramosa in tobacco fields using formulated SL analogues was successful. Two other options for weed control are discussed: deactivation of stimulants prior to action and

  16. EFFECTS OF PRE-GERMINATION TREATMENTS AND STORAGE ON GERMINATION OF Astronium fraxinifolium SCHOTT (ANACARDIACEAE DIASPORES

    Directory of Open Access Journals (Sweden)

    Lílian de Lima Braga

    2014-06-01

    Full Text Available http://dx.doi.org/10.5902/1980509814577The goal of this study was to evaluate the germination and the storage capacity of Astronium fraxinifolium diaspores. Six pre-germination treatments were used in the experiment: control treatment (intact diaspores; diaspores immersed in water at room temperature (25º C for 5 min; diaspores immersed in water at 70° C for 5 min; diaspores immersed in water at 100° C for 5 min; diaspores immersed in sodium hypochlorite solution (1:1000 for 2 min; and diaspores mechanically scarified with sandpaper #80. To evaluate storage conditions, we tested two different types of packaging (permeable paper bag and transparent glass jar and two environmental conditions (cold chamber and room conditions, resulting in four treatments. The germination tests were performed for zero (control and 60, 120, 180, 240, 300 and 360 days after storage. The effects of different treatments on germination and storage of diaspores were evaluated by ANOVA, followed by Tukey test. Regarding to pre-germination treatments, high germination rates were observed in the hypochlorite (98.0 ± 4.22%, control (97.0 ± 4.83%, water at room temperature (96.0 ± 6.99% and water at 70º C (83.0 ± 29.08% treatments. Thus, Astronium fraxinifolium diaspores do not present dormancy. During storage, the diaspores remained viable throughout the study period with high germination rates, except for the treatment in paper bags placed in the cold chamber, in which the diaspores lost their viability in the eighth month of storage. Therefore, this is not a recommended storage method for this species.

  17. Effects of plant growth promoting rhizobacteria (PGPR and cover crops on seed germination and early establishment of field dodder (Cuscuta campestris Yunk.

    Directory of Open Access Journals (Sweden)

    Sarić-Krsmanović Marija

    2017-01-01

    Full Text Available Several bacterial cultures: Bacillus licheniformis (MO1, B. pumilus (MO2, and B. amyloliquefaciens (MO3, isolated from manure; B. megatherium ZP6 (MO4 isolated from maize rhizosphere; Azotobacter chroococcum Ps1 (MO5 and Pseudomonas fluorescens (MO6, were used to test the influence of plant growth promoting rhizobacteria (PGPR on seed germination and germination rate of field dodder (Cuscuta campestris Yunk.. Also, to examine the effect of host seeds on germination and initial growth of seedlings of field dodder plants in the dark and under white light, the seeds of four host plants were used (watermelon, red clover, alfalfa and sugar beet. Germinated seeds were counted daily over a ten-day period and the length of seedlings was measured on the final day. The results show that treatments MO3, MO4 and MO6 had inhibitory effects (15%, 65% and 52%, respectively, while treatments MO1, MO2 and MO5 had stimulating effects (3%, 3% and 19%, respectively on seed germination of field dodder. The data for host seeds show that light was a significant initial factor (83-95%, control 95% for stimulating seed germination of field dodder plants, apart from host presence (73-79%, control 80%.

  18. [Bacterial vaginosis].

    Science.gov (United States)

    Romero Herrero, Daniel; Andreu Domingo, Antonia

    2016-07-01

    Bacterial vaginosis (BV) is the main cause of vaginal dysbacteriosis in the women during the reproductive age. It is an entity in which many studies have focused for years and which is still open for discussion topics. This is due to the diversity of microorganisms that cause it and therefore, its difficult treatment. Bacterial vaginosis is probably the result of vaginal colonization by complex bacterial communities, many of them non-cultivable and with interdependent metabolism where anaerobic populations most likely play an important role in its pathogenesis. The main symptoms are an increase of vaginal discharge and the unpleasant smell of it. It can lead to serious consequences for women, such as an increased risk of contracting sexually transmitted infections including human immunodeficiency virus and upper genital tract and pregnancy complications. Gram stain is the gold standard for microbiological diagnosis of BV, but can also be diagnosed using the Amsel clinical criteria. It should not be considered a sexually transmitted disease but it is highly related to sex. Recurrence is the main problem of medical treatment. Apart from BV, there are other dysbacteriosis less characterized like aerobic vaginitis of which further studies are coming slowly but are achieving more attention and consensus among specialists. Copyright © 2016 Elsevier España, S.L.U. All rights reserved.

  19. Polyamine biosynthesis during germination of yeast ascospores.

    Science.gov (United States)

    Brawley, J V; Ferro, A J

    1979-01-01

    The role of the diamine putrescine during germination and outgrowth of ascospores of Saccharomyces cerevisiae was examined. Ornithine decarboxylase activity increased and declined rapidly during germination and outgrowth; peak activity was attained after the cells had proceeded through the G1 interval of the cell cycle, whereas minimal activity was present at the completion of the first cell division. alpha-Methylornithine inhibited both ornithine decarboxylase activity and the in vivo accumulation of putrescine. In the presence of alpha-methylornithireak dormancy and proceed through one cell division. Subsequent cellular growth, however, was retarded but not completely inhibited. The supplementation of Methylglyoxal bis(guanylhydrazone) to sporulation medium greatly inhibited this sexual process. These data suggest that the synthesis of putrescine is not required for the breaking of spore dormancy, but that polyamine biosynthesis may be essential for meiosis and sporulation. PMID:387744

  20. Germination and storage of caranda seeds (Copernicia alba

    Directory of Open Access Journals (Sweden)

    Tathiana Elisa Masetto

    2012-12-01

    Full Text Available Caranda is a Brazilian native palm tree, belonging to Arecaceae family and occurring, predominan,t in the Brazilian Swampland. This work studied the germination and the caranda seeds storage behavior. The germination study was carried out in the temperatures of 25ºC and 30ºC in constant white light and the alternate temperature of 20/30ºC with 10 hours of darkness for the lowest temperature and 14 hours of light for the highest temperature, using paper and paper roll as substratum. At the end of test, the germination percentage, germination speed index, germination medium time and the primary root length were evaluated. After the seeds improvement, it was obtained two sub-samples destined for 30 days storage in two invironments: cold and dry chamber (16ºC/55% UR and freezer (-18ºC. The following tests, water content, germination, germination medium time and primary root length were evaluated. The caranda seeds germination in paper roll and on paper is favored by the temperature of 20/30ºC in paper roll and on paper and paper roll on 30ºC. The freezing and cold camera storage during 30 days are efficient to reduce the germination medium time of caranda seeds and to keep the germination percentage.

  1. In vitro germination of desert rose varieties(

    OpenAIRE

    Tatiane Lemos Varella; Gizelly Mendes Silva; Kaliane Zaira Camacho Maximiliano da Cruz; Andréia Izabel Mikovski; Josué Ribeiro da Silva Nunes; Ilio Fealho Carvalho; Maurecilne Lemes Silva

    2015-01-01

    The drought stress resistance is a characteristic of the desert rose and its estimable beauty flowers, which gave it great relevance in the ornamental market. However, the desert rose production and germination is hampered by possible sterility of their male and female flowers and frequent problems in pollination, so the tissue culture is a promising alternative to the propagation of these plants. This study aimed to evaluate the effect of gibberellic acid on four commercial varieties of dese...

  2. Escherichia coli F4 fimbriae specific lama single-domain antibody fragments effectively inhibit bacterial adhesion in vitro but poorly protect against diarrhea

    NARCIS (Netherlands)

    Harmsen, M.M.; Solt, van C.B.; Hoogendoorn, A.; Zijderveld, van F.G.; Niewold, T.A.; Meulen, van der J.

    2005-01-01

    Oral administration of polyclonal antibodies directed against enterotoxigenic Escherichia coli (ETEC) F4 fimbriae is used to protect against piglet post-weaning diarrhoea. For cost reasons, we aim to replace these polyclonal antibodies by recombinant llama single-domain antibody fragments (VHHs)

  3. iTRAQ Protein Profile Differential Analysis of Dormant and Germinated Grassbur Twin Seeds Reveals that Ribosomal Synthesis and Carbohydrate Metabolism Promote Germination Possibly Through the PI3K Pathway.

    Science.gov (United States)

    Zhang, Guo-Liang; Zhu, Yue; Fu, Wei-Dong; Wang, Peng; Zhang, Rui-Hai; Zhang, Yan-Lei; Song, Zhen; Xia, Gui-Xian; Wu, Jia-He

    2016-06-01

    Grassbur is a destructive and invasive weed in pastures, and its burs can cause gastric damage to animals. The strong adaptability and reproductive potential of grassbur are partly due to a unique germination mechanism whereby twin seeds develop in a single bur: one seed germinates, but the other remains dormant. To investigate the molecular mechanism of seed germination in twin seeds, we used isobaric tags for relative and absolute quantitation (iTRAQ) to perform a dynamic proteomic analysis of germination and dormancy. A total of 1,984 proteins were identified, 161 of which were considered to be differentially accumulated. The differentially accumulated proteins comprised 102 up-regulated and 59 down-regulated proteins. These proteins were grouped into seven functional categories, ribosomal proteins being the predominant group. The authenticity and accuracy of the results were confirmed by enzyme-linked immunosorbent assay (ELISA) and quantitative real-time reverse transcription-PCR (qPCR). A dynamic proteomic analysis revealed that ribosome synthesis and carbohydrate metabolism affect seed germination possibly through the phosphoinositide 3-kinase (PI3K) pathway. As the PI3K pathway is generally activated by insulin, analyses of seeds treated with exogenous insulin by qPCR, ELISA and iTRAQ confirmed that the PI3K pathway can be activated, which suppresses dormancy and promotes germination in twin grassbur seeds. Together, these results show that the PI3K pathway may play roles in stimulating seed germination in grassbur by modulating ribosomal synthesis and carbohydrate metabolism. © The Author 2016. Published by Oxford University Press on behalf of Japanese Society of Plant Physiologists. All rights reserved. For permissions, please email: journals.permissions@oup.com.

  4. Metabolism and the triggering of germination of Bacillus megaterium

    International Nuclear Information System (INIS)

    Scott, I.R.; Ellar, D.J.

    1978-01-01

    L-[2,3- 3 H]Alanine was used to probe for metabolism of alanine during triggering of germination of spores of Bacillus megaterium KM. No detectable incorporation of label into any compound, including water, was found, indicating that any metabolism involving the alanine germinant must be at a very low rate and also that alanine racemase is absent from spores of this strain. Spores were germinated in 3 H 2 0 to find if any of the many metabolic reactions causing irreversible incorporation of 3 H into reaction products took place during triggering og germination. No incorporation was detected until 2-3 min after addition of germinants. It is therefore concluded that a wide variety of metabolic routes, including glycolysis, the tricarboxylic acid cycle, the pentose phosphate pathway and amino acid metabolism are either not involved in the reactions causing the triggering of germination or operate at an extremely low rate during this process. (author)

  5. Effects of graphene on seed germination and seedling growth

    Energy Technology Data Exchange (ETDEWEB)

    Zhang, Ming; Gao, Bin, E-mail: bg55@ufl.edu [University of Florida, Department of Agricultural and Biological Engineering (United States); Chen, Jianjun [University of Florida, Department of Environmental Horticulture and Mid-Florida Research & Education Center (United States); Li, Yuncong [University of Florida, Soil and Water Science Department Tropical Research & Education Center (United States)

    2015-02-15

    The environmental impact of graphene has recently attracted great attention. In this work, we show that graphene at a low concentration affected tomato seed germination and seedling growth. Graphene-treated seeds germinated much faster than control seeds. Analytical results indicated that graphene penetrated seed husks. The penetration might break the husks to facilitate water uptake, resulting in faster germination and higher germination rates. At the stage of seedling growth, graphene was also able to penetrate root tip cells. Seedlings germinated from graphene-treated seeds had slightly lower biomass accumulation than the control, but exhibited significantly longer stems and roots than the control, which suggests that graphene, in contrast with other nanoparticles, had different effects on seedling growth. Taken together, our results imply that graphene played complicated roles in affecting the initial stage of seed germination and subsequent seedling growth.

  6. Bacterial mitosis

    DEFF Research Database (Denmark)

    Møller-Jensen, Jakob; Borch, Jonas; Dam, Mette

    2003-01-01

    Bacterial DNA segregation takes place in an active and ordered fashion. In the case of Escherichia coli plasmid R1, the partitioning system (par) separates paired plasmid copies and moves them to opposite cell poles. Here we address the mechanism by which the three components of the R1 par system...... act together to generate the force required for plasmid movement during segregation. ParR protein binds cooperatively to the centromeric parC DNA region, thereby forming a complex that interacts with the filament-forming actin-like ParM protein in an ATP-dependent manner, suggesting that plasmid...

  7. Asymbiotic germination in three Chloraea species (Orchidaceae) from Chile

    OpenAIRE

    PEREIRA, GUILLERMO; ALBORNOZ, VERÓNICA; ROMERO, CHRISTIAN; LARA, SEBASTIÁN; SÁNCHEZ-OLATE, MANUEL; RÍOS, DARCY; ATALA, CRISTIAN

    2017-01-01

    ABSTRACT Orchids require symbiotic fungi and/or specific conditions to germinate. Asymbiotic techniques have been shown successful for orchid germination. In Chile, Chloraea include many endemic, and potentially ornamental, terrestrial orchid species. In this study, individuals of Chloraea crispa, C. gavilu and C. virescens were manually autopollinated. The resulting capsules were sterilized and seeds were aseptically obtained. We evaluated asymbiotic germination in: Agar Water (AW), Knudson ...

  8. Effect of biologically treated petroleum sludge on seed germination and seedling growth of Vigna unguiculata (L. Walp. (Fabaceae

    Directory of Open Access Journals (Sweden)

    Jeyabalan Sangeetha

    2014-06-01

    Full Text Available The present investigation was carried out to study the response of different concentrations of treated petroleum sludge on seed germination, root and shoot length and tolerance of Vigna unguiculata (L. Walp. The biologically treated petroleum sludge with bacterial consortium showed 54.8% reduction in total petroleum hydrocarbons. Treated sludge was utilized with agricultural soil in known concentration for the assessment of growth of V. unguiculata. A remarkable absence of seed germination was observed at higher sludge concentration. The different concentrations of treated petroleum sludge showed severe decline on the length, weight and vigour index of the tested seedlings with increasing sludge concentrations. The results showed that the difference in rate of seed germination was significant among various concentrations. Under environmental stress condition, germination is the most critical phase of life cycle in crop plants. In this present study, the high oil content found to alter the osmotic relation between seed and water and thus reduce the amount of water absorbed. It was concluded that the concentration of nutrients and oil present in the treated sludge were toxic to the plant.

  9. Spatio-Temporal Metabolite Profiling of the Barley Germination Process by MALDI MS Imaging.

    Directory of Open Access Journals (Sweden)

    Karin Gorzolka

    Full Text Available MALDI mass spectrometry imaging was performed to localize metabolites during the first seven days of the barley germination. Up to 100 mass signals were detected of which 85 signals were identified as 48 different metabolites with highly tissue-specific localizations. Oligosaccharides were observed in the endosperm and in parts of the developed embryo. Lipids in the endosperm co-localized in dependency on their fatty acid compositions with changes in the distributions of diacyl phosphatidylcholines during germination. 26 potentially antifungal hordatines were detected in the embryo with tissue-specific localizations of their glycosylated, hydroxylated, and O-methylated derivates. In order to reveal spatio-temporal patterns in local metabolite compositions, multiple MSI data sets from a time series were analyzed in one batch. This requires a new preprocessing strategy to achieve comparability between data sets as well as a new strategy for unsupervised clustering. The resulting spatial segmentation for each time point sample is visualized in an interactive cluster map and enables simultaneous interactive exploration of all time points. Using this new analysis approach and visualization tool germination-dependent developments of metabolite patterns with single MS position accuracy were discovered. This is the first study that presents metabolite profiling of a cereals' germination process over time by MALDI MSI with the identification of a large number of peaks of agronomically and industrially important compounds such as oligosaccharides, lipids and antifungal agents. Their detailed localization as well as the MS cluster analyses for on-tissue metabolite profile mapping revealed important information for the understanding of the germination process, which is of high scientific interest.

  10. Differential Effects of Carbohydrates on Arabidopsis Pollen Germination.

    Science.gov (United States)

    Hirsche, Jörg; García Fernández, José M; Stabentheiner, Edith; Großkinsky, Dominik K; Roitsch, Thomas

    2017-04-01

    Pollen germination as a crucial process in plant development strongly depends on the accessibility of carbon as energy source. Carbohydrates, however, function not only as a primary energy source, but also as important signaling components. In a comprehensive study, we analyzed various aspects of the impact of 32 different sugars on in vitro germination of Arabidopsis pollen comprising about 150 variations of individual sugars and combinations. Twenty-six structurally different mono-, di- and oligosaccharides, and sugar analogs were initially tested for their ability to support pollen germination. Whereas several di- and oligosaccharides supported pollen germination, hexoses such as glucose, fructose and mannose did not support and even considerably inhibited pollen germination when added to germination-supporting medium. Complementary experiments using glucose analogs with varying functional features, the hexokinase inhibitor mannoheptulose and the glucose-insensitive hexokinase-deficient Arabidopsis mutant gin2-1 suggested that mannose- and glucose-mediated inhibition of sucrose-supported pollen germination depends partially on hexokinase signaling. The results suggest that, in addition to their role as energy source, sugars act as signaling molecules differentially regulating the complex process of pollen germination depending on their structural properties. Thus, a sugar-dependent multilayer regulation of Arabidopsis pollen germination is supported, which makes this approach a valuable experimental system for future studies addressing sugar sensing and signaling. © The Author 2017. Published by Oxford University Press on behalf of Japanese Society of Plant Physiologists. All rights reserved. For permissions, please email: journals.permissions@oup.com.

  11. The mechanism underlying fast germination of tomato cultivar LA2711.

    Science.gov (United States)

    Yang, Rongchao; Chu, Zhuannan; Zhang, Haijun; Li, Ying; Wang, Jinfang; Li, Dianbo; Weeda, Sarah; Ren, Shuxin; Ouyang, Bo; Guo, Yang-Dong

    2015-09-01

    Seed germination is important for early plant morphogenesis as well as abiotic stress tolerance, and is mainly controlled by the phytohormones abscisic acid (ABA) and gibberellic acid (GA). Our previous studies identified a salt-tolerant tomato cultivar, LA2711, which is also a fast-germinating genotype, compared to its salt-sensitive counterpart, ZS-5. In an effort to further clarify the mechanism underlying this phenomenon, we compared the dynamic levels of ABA and GA4, the transcript abundance of genes involved in their biosynthesis and catabolism as well as signal transduction between the two cultivars. In addition, we tested seed germination sensitivity to ABA and GAs. Our results revealed that insensitivity of seed germination to exogenous ABA and low ABA content in seeds are the physiological mechanisms conferring faster germination rates of LA2711 seeds. SlCYP707A2, which encodes an ABA catabolic enzyme, may play a decisive role in the fast germination rate of LA2711, as it showed a significantly higher level of expression in LA2711 than ZS-5 at most time points tested during germination. The current results will enable us to gain insight into the mechanism(s) regarding seed germination of tomato and the role of fast germination in stress tolerance. Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.

  12. Evolution of 'smoke' induced seed germination in pyroendemic plants

    Science.gov (United States)

    Keeley, J. E.; Pausas, J.G.

    2016-01-01

    Pyroendemics are plants in which seedling germination and successful seedling recruitment are restricted to immediate postfire environments. In many fire-prone ecosystems species cue their germination to immediate postfire conditions. Here we address how species have evolved one very specific mechanism, which is using the signal of combustion products from biomass. This is often termed ‘smoke’ stimulated germination although it was first discovered in studies of charred wood effects on germination of species strictly tied to postfire conditions (pyroendemics). Smoke stimulated germination has been reported from a huge diversity of plant species. The fact that the organic compound karrikin (a product of the degradation of cellulose) is a powerful germination cue in many species has led to the assumption that this compound is the only chemical responsible for smoke-stimulated germination. Here we show that smoke-stimulated germination is a complex trait with different compounds involved. We propose that convergent evolution is a more parsimonious model for smoke stimulated germination, suggesting that this trait evolved multiple times in response to a variety of organic and inorganic chemical triggers in smoke. The convergent model is congruent with the evolution of many other fire-related traits.

  13. Nuclear dynamics during ascospore germination in Sordaria macrospora.

    Science.gov (United States)

    Teichert, Ines

    2017-01-01

    The ascomycete Sordaria macrospora has a long history as a model organism for studying fungal sexual development. Starting from an ascospore, sexual fruiting bodies (perithecia) develop within seven days and discharge new ascospores. Sexual development has been studied in detail, revealing genes required for perithecium formation and ascospore germination. However, the germination process per se has not yet been examined. Here I analyze nuclear dynamics during ascospore germination using a fluorescently labeled histone. Live-cell imaging revealed that nuclei are transported into germination vesicles that form on one side of the spore. Polar growth is established from these vesicles. Copyright © 2016 Elsevier Inc. All rights reserved.

  14. Proteins YlaJ and YhcN contribute to the efficiency of spore germination in Bacillus subtilis.

    Science.gov (United States)

    Johnson, Christian L; Moir, Anne

    2017-04-01

    The YlaJ and YhcN spore lipoproteins of Bacillus subtilis contain a common domain, and are of unknown function. Homologues of YlaJ or YhcN are widespread in Bacilli and are also encoded in those Clostridia that use cortex lytic enzymes SleB and CwlJ for cortex hydrolysis during germination. In B. subtilis, we report that single and double mutants lacking YlaJ and/or YhcN show a reduced rate of spore germination in L-alanine, with a delay in loss of heat resistance, release of dipicolinic acid and OD fall. If B. subtilis spores lack the cortex lytic enzyme CwlJ, spore cortex degradation and subsequent outgrowth to form colonies is strictly dependent on the other cortex lytic enzyme SleB, allowing a test of SleB function; in a cwlJ mutant background, the combined loss of both ylaJ and yhcN genes resulted in a spore population in which only 20% of spores germinated and outgrew to form colonies, suggesting that SleB activity is compromised. YlaJ and YhcN have a role in germination that is not yet well defined, but these proteins are likely to contribute, directly or indirectly, to early events in germination, including effective SleB function. © FEMS 2017. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  15. Sensitizing Clostridium difficile Spores With Germinants on Skin and Environmental Surfaces Represents a New Strategy for Reducing Spores via Ambient Mechanisms

    Directory of Open Access Journals (Sweden)

    Michelle Marie Nerandzic

    2017-10-01

    Full Text Available Background: Clostridium difficile is a leading cause of healthcare-associated infections worldwide. Prevention of C. difficile transmission is challenging because spores are not killed by alcohol-based hand sanitizers or many commonly used disinfectants. One strategy to control spores is to induce germination, thereby rendering the spores more susceptible to benign disinfection measures and ambient stressors. Methods/Results: C. difficile spores germinated on skin after a single application of cholic acid-class bile salts and co-germinants; for 4 C. difficile strains, recovery of viable spores from skin was reduced by ~0.3 log10CFU to 2 log10CFU after 2 hours and ~1 log10CFU to >2.5 log 10CFU after 24 hours. The addition of taurocholic acid to 70% and 30% ethanol significantly enhanced reduction of viable spores on skin and on surfaces. Desiccation, and to a lesser extent the presence of oxygen, were identified as the stressors responsible for reductions of germinated spores on skin and surfaces. Additionally, germinated spores became susceptible to killing by pH 1.5 hydrochloric acid, suggesting that germinated spores that remain viable on skin and surfaces might be killed by gastric acid after ingestion. Antibiotic-treated mice did not become colonized after exposure to germinated spores, whereas 100% of mice became colonized after exposure to the same quantity of dormant spores. Conclusions: Germination could provide a new approach to reduce C. difficile spores on skin and in the environment and to render surviving spores less capable of causing infection. Our findings suggest that it may be feasible to develop alcohol-based hand sanitizers containing germinants that reduce spores on hands.

  16. The role of hull in germination and salinity tolerance in some ...

    African Journals Online (AJOL)

    hulled and dehulled) of sunflower seeds of Opal, Shelly (Confectionary) and Pactol (Oily) were tested to determine the effects of the hull on salinity tolerance during germination. Germination percentage (%), mean germination time (day), root and ...

  17. Effects of salt stress on germination of some maize (Zea mays L ...

    African Journals Online (AJOL)

    STORAGESEVER

    2009-10-05

    Oct 5, 2009 ... Key words: Maize, NaCl, germination percentage, stress tolerance ındex, germination ındex. .... interactions between salt treatments and cultivars. This ..... Hormones and Abiotic Stresses on Germination, Growth and Phos-.

  18. Bacterial Ecology

    DEFF Research Database (Denmark)

    Fenchel, Tom

    2011-01-01

    compounds these must first be undergo extracellular hydrolysis. Bacteria have a great diversity with respect to types of metabolism that far exceeds the metabolic repertoire of eukaryotic organisms. Bacteria play a fundamental role in the biosphere and certain key processes such as, for example......, the production and oxidation of methane, nitrate reduction and fixation of atmospheric nitrogen are exclusively carried out by different groups of bacteria. Some bacterial species – ‘extremophiles’ – thrive in extreme environments in which no eukaryotic organisms can survive with respect to temperature, salinity...... biogeochemical processes are carried exclusively by bacteria. * Bacteria play an important role in all types of habitats including some that cannot support eukaryotic life....

  19. Calculating germination measurements and organizing spreadsheets

    OpenAIRE

    Ranal, Marli A.; Santana, Denise Garcia de; Ferreira, Wanessa Resende; Mendes-Rodrigues, Clesnan

    2009-01-01

    With the objective to minimize difficulties for beginners we are proposing the use of a conventional spreadsheet for the calculations of the main germination (or emergence) measurements, the organization of the final data for the statistical analysis and some electronic commands involved in these steps. Com o objetivo de minimizar as dificuldades dos iniciantes, estamos propondo o uso de planilhas eletrônicas convencionais para o cálculo das principais medidas de germinação (ou emergência)...

  20. Bacterial Actins.

    Science.gov (United States)

    Izoré, Thierry; van den Ent, Fusinita

    2017-01-01

    A diverse set of protein polymers, structurally related to actin filaments contributes to the organization of bacterial cells as cytomotive or cytoskeletal filaments. This chapter describes actin homologs encoded by bacterial chromosomes. MamK filaments, unique to magnetotactic bacteria, help establishing magnetic biological compasses by interacting with magnetosomes. Magnetosomes are intracellular membrane invaginations containing biomineralized crystals of iron oxide that are positioned by MamK along the long-axis of the cell. FtsA is widespread across bacteria and it is one of the earliest components of the divisome to arrive at midcell, where it anchors the cell division machinery to the membrane. FtsA binds directly to FtsZ filaments and to the membrane through its C-terminus. FtsA shows altered domain architecture when compared to the canonical actin fold. FtsA's subdomain 1C replaces subdomain 1B of other members of the actin family and is located on the opposite side of the molecule. Nevertheless, when FtsA assembles into protofilaments, the protofilament structure is preserved, as subdomain 1C replaces subdomain IB of the following subunit in a canonical actin filament. MreB has an essential role in shape-maintenance of most rod-shaped bacteria. Unusually, MreB filaments assemble from two protofilaments in a flat and antiparallel arrangement. This non-polar architecture implies that both MreB filament ends are structurally identical. MreB filaments bind directly to membranes where they interact with both cytosolic and membrane proteins, thereby forming a key component of the elongasome. MreB filaments in cells are short and dynamic, moving around the long axis of rod-shaped cells, sensing curvature of the membrane and being implicated in peptidoglycan synthesis.

  1. Abdominal radiation causes bacterial translocation

    International Nuclear Information System (INIS)

    Guzman-Stein, G.; Bonsack, M.; Liberty, J.; Delaney, J.P.

    1989-01-01

    The purpose of this study was to determine if a single dose of radiation to the rat abdomen leads to bacterial translocation into the mesenteric lymph nodes (MLN). A second issue addressed was whether translocation correlates with anatomic damage to the mucosa. The radiated group (1100 cGy) which received anesthesia also was compared with a control group and a third group which received anesthesia alone but no abdominal radiation. Abdominal radiation lead to 100% positive cultures of MLN between 12 hr and 4 days postradiation. Bacterial translocation was almost nonexistent in the control and anesthesia group. Signs of inflammation and ulceration of the intestinal mucosa were not seen until Day 3 postradiation. Mucosal damage was maximal by Day 4. Bacterial translocation onto the MLN after a single dose of abdominal radiation was not apparently dependent on anatomical, histologic damage of the mucosa

  2. Conserved Transcriptional Regulatory Programs Underlying Rice and Barley Germination

    Science.gov (United States)

    Lin, Li; Tian, Shulan; Kaeppler, Shawn; Liu, Zongrang; An, Yong-Qiang (Charles)

    2014-01-01

    Germination is a biological process important to plant development and agricultural production. Barley and rice diverged 50 million years ago, but share a similar germination process. To gain insight into the conservation of their underlying gene regulatory programs, we compared transcriptomes of barley and rice at start, middle and end points of germination, and revealed that germination regulated barley and rice genes (BRs) diverged significantly in expression patterns and/or protein sequences. However, BRs with higher protein sequence similarity tended to have more conserved expression patterns. We identified and characterized 316 sets of conserved barley and rice genes (cBRs) with high similarity in both protein sequences and expression patterns, and provided a comprehensive depiction of the transcriptional regulatory program conserved in barley and rice germination at gene, pathway and systems levels. The cBRs encoded proteins involved in a variety of biological pathways and had a wide range of expression patterns. The cBRs encoding key regulatory components in signaling pathways often had diverse expression patterns. Early germination up-regulation of cell wall metabolic pathway and peroxidases, and late germination up-regulation of chromatin structure and remodeling pathways were conserved in both barley and rice. Protein sequence and expression pattern of a gene change quickly if it is not subjected to a functional constraint. Preserving germination-regulated expression patterns and protein sequences of those cBRs for 50 million years strongly suggests that the cBRs are functionally significant and equivalent in germination, and contribute to the ancient characteristics of germination preserved in barley and rice. The functional significance and equivalence of the cBR genes predicted here can serve as a foundation to further characterize their biological functions and facilitate bridging rice and barley germination research with greater confidence. PMID

  3. Inter- and intra-specific cuticle variation between amphimictic and parthenogenetic species of root-knot nematode (Meloidogyne spp.) as revealed by a bacterial parasite (Pasteuria penetrans).

    Science.gov (United States)

    Davies, K G; Rowe, J A; Williamson, V M

    2008-06-01

    Specific host-parasite interactions exist between species and strains of plant parasitic root-knot nematodes and the Gram-positive bacterial hyperparasite Pasteuria penetrans. This bacterium produces endospores that adhere to the cuticle of migrating juveniles, germinate and colonise the developing female within roots. Endospore attachment of P. penetrans populations to second-stage juveniles of the root-knot nematode species Meloidogyne incognita and Meloidogyne hapla showed there were interactive differences between bacterial populations and nematode species. Infected females of M. incognita produced a few progeny which were used to establish two nematode lines from single infective juveniles encumbered with either three or 26 endospores. Single juvenile descent lines of each nematode species were produced to test whether cuticle variation was greater within M. hapla lines that reproduce by facultative meiotic parthenogenesis than within lines of M. incognita, which reproduces by obligate parthenogenesis. Assays revealed variability between broods of individual females derived from single second-stage juvenile descent lines of both M. incognita and M. hapla suggesting that progeny derived from a single individual can differ in spore adhesion in both sexual and asexual nematode species. These results suggest that special mechanisms that produced these functional differences in the cuticle surface may have evolved in both sexually and asexually reproducing nematodes as a strategy to circumvent infection by this specialised hyperparasite.

  4. Identification of New Single Nucleotide Polymorphism-Based Markers for Inter- and Intraspecies Discrimination of Obligate Bacterial Parasites (Pasteuria spp.) of Invertebrates ▿ †

    Science.gov (United States)

    Mauchline, Tim H.; Knox, Rachel; Mohan, Sharad; Powers, Stephen J.; Kerry, Brian R.; Davies, Keith G.; Hirsch, Penny R.

    2011-01-01

    Protein-encoding and 16S rRNA genes of Pasteuria penetrans populations from a wide range of geographic locations were examined. Most interpopulation single nucleotide polymorphisms (SNPs) were detected in the 16S rRNA gene. However, in order to fully resolve all populations, these were supplemented with SNPs from protein-encoding genes in a multilocus SNP typing approach. Examination of individual 16S rRNA gene sequences revealed the occurrence of “cryptic” SNPs which were not present in the consensus sequences of any P. penetrans population. Additionally, hierarchical cluster analysis separated P. penetrans 16S rRNA gene clones into four groups, and one of which contained sequences from the most highly passaged population, demonstrating that it is possible to manipulate the population structure of this fastidious bacterium. The other groups were made from representatives of the other populations in various proportions. Comparison of sequences among three Pasteuria species, namely, P. penetrans, P. hartismeri, and P. ramosa, showed that the protein-encoding genes provided greater discrimination than the 16S rRNA gene. From these findings, we have developed a toolbox for the discrimination of Pasteuria at both the inter- and intraspecies levels. We also provide a model to monitor genetic variation in other obligate hyperparasites and difficult-to-culture microorganisms. PMID:21803895

  5. Identification of new single nucleotide polymorphism-based markers for inter- and intraspecies discrimination of obligate bacterial parasites (Pasteuria spp.) of invertebrates.

    Science.gov (United States)

    Mauchline, Tim H; Knox, Rachel; Mohan, Sharad; Powers, Stephen J; Kerry, Brian R; Davies, Keith G; Hirsch, Penny R

    2011-09-01

    Protein-encoding and 16S rRNA genes of Pasteuria penetrans populations from a wide range of geographic locations were examined. Most interpopulation single nucleotide polymorphisms (SNPs) were detected in the 16S rRNA gene. However, in order to fully resolve all populations, these were supplemented with SNPs from protein-encoding genes in a multilocus SNP typing approach. Examination of individual 16S rRNA gene sequences revealed the occurrence of "cryptic" SNPs which were not present in the consensus sequences of any P. penetrans population. Additionally, hierarchical cluster analysis separated P. penetrans 16S rRNA gene clones into four groups, and one of which contained sequences from the most highly passaged population, demonstrating that it is possible to manipulate the population structure of this fastidious bacterium. The other groups were made from representatives of the other populations in various proportions. Comparison of sequences among three Pasteuria species, namely, P. penetrans, P. hartismeri, and P. ramosa, showed that the protein-encoding genes provided greater discrimination than the 16S rRNA gene. From these findings, we have developed a toolbox for the discrimination of Pasteuria at both the inter- and intraspecies levels. We also provide a model to monitor genetic variation in other obligate hyperparasites and difficult-to-culture microorganisms.

  6. Comparative seed germination traits in alpine and subalpine grasslands: higher elevations are associated with warmer germination temperatures.

    Science.gov (United States)

    Fernández-Pascual, E; Jiménez-Alfaro, B; Bueno, Á

    2017-01-01

    Seed germination traits in alpine grasslands are poorly understood, despite the sensitivity of these communities to climate change. We hypothesise that germination traits predict species occurrence along the alpine-subalpine elevation gradient. Phylogenetic comparative analyses were performed using fresh seeds of 22 species from alpine and subalpine grasslands (1600-2400 m) of the Cantabrian Mountains, Spain (43° N, 5° W). Laboratory experiments were conducted to characterise germinability, optimum germination temperature and effect of cold and warm stratification on dormancy breaking. Variability in these traits was reduced by phylogenetic principal component analysis (phyl.PCA). Phylogenetic generalised least squares regression (PGLS) was used to fit a model in which species average elevation was predicted from their position on the PCA axes. Most subalpine species germinated in snow-like conditions, whereas most alpine species needed accumulation of warm temperatures. Phylogenetic signal was low. PCA1 ordered species according to overall germinability, whilst PCA2 ordered them according to preference for warm or cold germination. PCA2 significantly predicted species occurrence in the alpine-subalpine gradient, as higher elevation species tended to have warmer germination preferences. Our results show that germination traits in high-mountain grasslands are closely linked to the alpine-subalpine gradient. Alpine species, especially those from stripped and wind-edge communities, prefer warmer germination niches, suggesting that summer emergence prevents frost damage during seedling establishment. In contrast, alpine snowfield and subalpine grassland plants have cold germination niches, indicating that winter emergence may occur under snow to avoid drought stress. © 2016 German Botanical Society and The Royal Botanical Society of the Netherlands.

  7. Comparative Study of Pre-Germination Treatments and their Effects ...

    African Journals Online (AJOL)

    FIRST LADY

    of leaves (10.05) respectively. Pre-germination treatments of seeds soaked in running water (SRW) for 24 hours were found to be more effective in seedlings growth and biomass production. Keywords: Tectona grandis, pre-germination treatment, seed dormancy, seedling growth. Introduction. Tectona grandis is one of the ...

  8. The pleiotropic effects of the seed germination inhibitor germostatin.

    Science.gov (United States)

    Ye, Yajin; Zhao, Yang

    2016-01-01

    Seed dormancy and germination are the most important adaptive traits of seed plants, which control the germination in a proper space and time. Internal genetic factors together with environmental cues govern seed dormancy and germination. Abscisic acid (ABA), a key phytohormone induces seed dormancy and inhibits seed germination through its molecular genetic signaling network responding the seed inherent physiological and environmental factors. Recently, auxin has been shown to be another phytohormone that induces seed dormancy. We have recently shown that germonstatin (GS), a small synthetic molecule identified by high through-put chemical genetic screenings, inhibits seed germination through up-regulating auxin signaling and inducing auxin biosynthesis. GERMOSTATIN RESISTANCE LOCUS 1 (GSR1) encodes a plant homeodomain (PHD) finger protein and is responsible for GS seed germination inhibition. Its knockdown mutant gsr1 displays decreased dormancy. In this report, we show that GS is not an ABA analog and provided 2 other GS-resistant mutants related to the chemical's function in seed germination inhibition other than gsr1, suggesting that GS may have pleiotropic effects through targeting different pathway governing seed germination.

  9. Germination phenology of some Great Basin native annual forb species

    Science.gov (United States)

    Tara A. Forbis

    2010-01-01

    Great Basin native plant communities are being replaced by the annual invasive cheatgrass Bromus tectorum. Cheatgrass exhibits a germination syndrome that is characteristic of facultative winter annuals. Although perennials dominate these communities, native annuals are present at many sites. Germination timing is often an important predictor of competitive...

  10. Investigating the Influence of Karrikins on Seed Germination

    Science.gov (United States)

    de Beer, Josef

    2012-01-01

    Recent research has identified a karrikin (a butenolide derative) known as 3-methyl-2H-furo[2,3-c]pyran-2-one, formed from burning cellulose, that stimulates seed germination. Here, I present ideas on how to investigate the influence of karrikins on seed germination in the laboratory.

  11. Proteins induced by salt stress in tomato germinating seeds

    International Nuclear Information System (INIS)

    Torres-Shumann, S.; Godoy, J.A.; del Pozo, O.; Pintor-Toro, J.A.

    1989-01-01

    Salt effects on protein synthesis in tomato germinating seeds were investigated by two-dimensional polyacrilamide gel electrophoresis of proteins labeled in vivo with ( 35 S)-Methionine. Seeds germinating in NaCl were analyzed at three germination stages (4mm long radicals, 15mm long radicles and expanding cotyledons) and compared to those germinating in water. At the first germination stage several basic proteins of M.W. 13Kd, 16Kd, 17Kd and 18Kd were detected in only salt germinating seeds. Other basic proteins of M.W. 12Kd, 50Kd and 54Kd were salt-induced at the second and third stage of germination. One 14Kd acid protein is observed in every assayed stage and shows several phosphorylated forms. The levels of expression of these proteins are directly correlated to assayed NaCl concentrations. All of these proteins, except 17Kd, are also induced by abscisic acid (ABA) in the same germination stages. A cooperative effect on the synthesis of these proteins is observed when both ABA and NaCl are present

  12. Germination of Themeda triandra (Kangaroo grass) as affected by ...

    African Journals Online (AJOL)

    Low rainfall in range areas restricts germination, growth and development of majority of range grasses. However, germination and establishment potential of forage grasses vary and depends on environmental conditions. Themeda triandra is an excellent known grass to grow under different environmental conditions.

  13. Germination of several groundnut cultivars in relation to incidence of ...

    African Journals Online (AJOL)

    This experiment is concerned with the germination of nine cultivars of groundnut grown in Nigeria in relation to incidence of fungi. The cultivars were NHK 5V8, NUTII 288, Samnut 10, 11, 21, 22, 23, 24 and MK 373. Germination potential was assessed after 10 days of planting in petri-dishes. Parameters such as seedling ...

  14. Differentiation inside multicelled macroconidia of Fusarium culmorum during early germination

    NARCIS (Netherlands)

    Chitarra, Gilma S; Breeuwer, Pieter; Rombouts, Frans M; Abee, Tjakko; Dijksterhuis, Jan

    Multicelled conidia are formed by many fungal species, but germination of these spores is scarcely studied. Here, the germination and the effects of antimicrobials on multicompartment macroconidia of Fusarium culmorum were investigated. Germ-tube formation was mostly from apical compartments. The

  15. Differentiation inside multicelled macroconidia of Fusarium culmorum during early germination

    NARCIS (Netherlands)

    Chitarra, G.S.; Breeuwer, P.; Rombouts, F.M.; Abee, T.; Dijksterhuis, J.

    2005-01-01

    Multicelled conidia are formed by many fungal species, but germination of these spores is scarcely studied. Here, the germination and the effects of antimicrobials on multicompartment macroconidia of Fusarium culmorum were investigated. Germ-tube formation was mostly from apical compartments. The

  16. Effect of exogenous gibberellic acid on germination, seedling growth ...

    African Journals Online (AJOL)

    The effect of gibberellic acid on germination and seedling growth of lettuce variety, Vista, under salinity conditions was studied. A reduction in germination percentage, roots and shoots length and fresh weight were observed under salt stress. At the same time, acid phosphatase and phytase activities in roots were reduced ...

  17. Improving the seed germination of little bluestem with selection

    Science.gov (United States)

    Rapid seed germination is an important characteristic when it comes to plant stand establishment under variable environmental conditions. This research was designed to improve the seed germination of six experimental Syn-0 lines of little bluestem [Schizachyrium scoparium (Michx.) Nash]. Two cycle...

  18. Modelling the effect of temperature on seed germination in some ...

    African Journals Online (AJOL)

    The prediction of germination percentage (GP) and germination speed (GS) of the seeds for some cucurbits (watermelon, melon, cucumber, summer squash, pumpkin and winter squash) was investigated by mathematical model based on temperature. The model, D = [a - (b x T) + (c x T2)] of Uzun et al. (2001), was adapted ...

  19. Effects of Sowing Media and Sowing Depth on Germination and ...

    African Journals Online (AJOL)

    This study examines the effect of sowing media and sowing depth on the germination and growth of Lecanodiscus cupanoides (Planch.Ex Benth). The germination of L. cupanoides seed was significantly affected by sowing depth and sowing medium at p=0.05. The result of various sowing media and sowing depth showed ...

  20. Asymbiotic germination of immature embryos of a medicinally ...

    African Journals Online (AJOL)

    The immature embryos (28 weeks after pollination) were inoculated on M (Mitra et al., 1976), and PDA (Potato Dextrose Agar) media, with and without different growth additives. The seeds showed positive germination response in both the nutrient media but the frequency and onset of germination response and associated ...

  1. The effect of different treatments on improving seed germination ...

    African Journals Online (AJOL)

    Creating optimal conditions for germination of medicinal plants seed is essential for their cultivation. Therefore, to evaluate the effect of different treatments on seed germination of two medicinal species, Descurainia sophia and Plantago ovata collected in 2009 from Tehran Province, an experiment with a factorial ...

  2. Full Length Research Paper Seed germination and in vitro plant ...

    African Journals Online (AJOL)

    Parkia biglobosa is an important leguminous forest species which is being threatened of going into extinction in Senegal. To preserve this genetic resource of great economic value, studies on germination were carried out and in vitro conservation option through tissue culture technique was adopted. 100% of germination ...

  3. Effects of animal's rumen juice on seed germination of Vicia ...

    African Journals Online (AJOL)

    To help understand the effects of grazing on seed germination characteristics of Vicia angustifolia L., we conducted a laboratory germination experiment of V. angustifolia L., which is a main companion species of Leguminosae family in alpine grassland of the Qinghai-Tibetan Plateau, using Yak and Tibetan sheep rumen ...

  4. Millipede damage to germinating acorns of northern red oak

    Science.gov (United States)

    Jimmy R. Galford; L. R. Auchmoody; Russell S. Walters; H. Clay. Smith; H. Clay. Smith

    1992-01-01

    Millipedes have not been reported as pests of germinating acorns. Studies in Pennsylvania on the impact of insects on northern red (Quercus rubra L. seedling establishment revealed that the millipede Ptyoiulus impressus (Say) damaged the radicles of germinating acorns. Up to 17 percent of the acorn radicles in areas with heavy acorn crops were damaged in 1'991....

  5. Effects of seed fermentation method on seed germination and vigor ...

    African Journals Online (AJOL)

    The present study was conducted to examine the influence of Lagenaria siceraria seed fermentation method on seed germination and vigor. Three seed fermentation methods (fermented in ambient air, plastic bag stored in ambient or in plastic bag buried) were tested on two cultivars during two years. Seed germination and ...

  6. Allelopathic effect of Jatropha curcas (Lin) leachate on germination ...

    African Journals Online (AJOL)

    Laboratory study was conducted using sterilized petri dishes with double layer of Whatman filter paper at averagely 27oC and 70% humidity. An interval of 24, 48, 76 and 92 hours were recorded on germination studies while radicle and shoot lengths at 92nhours respectively. Decreased in germination percentage, shoot ...

  7. The role of seed priming in improving seed germination and ...

    African Journals Online (AJOL)

    Salinity is considered as a major abiotic stress affecting germination, seedling growth and crop production in arid and semi-arid regions. Many techniques are used to improve tolerance to salinity. Priming is believed to be an effective technique that increases germination, plant growth and improve yield of several ...

  8. IAA production during germination of Orobanche spp. seeds.

    Science.gov (United States)

    Slavov, Slavtcho; van Onckelen, Henry; Batchvarova, Rossitza; Atanassov, Atanas; Prinsen, Els

    2004-07-01

    Broomrapes (Orobanche spp.) are parasitic plants, whose growth and development fully depend on the nutritional connection established between the parasite and the roots of the respective host plant. Phytohormones are known to play a role in establishing the specific Orobanche-host plant interaction. The first step in the interaction is seed germination triggered by a germination stimulant secreted by the host-plant roots. We quantified indole-3-acetic acid (IAA) and abscisic acid (ABA) during the seed germination of tobacco broomrape (Orobanche ramosa) and sunflower broomrape (O. cumana). IAA was mainly released from Orobanche seeds in host-parasite interactions as compared to non-host-parasite interactions. Moreover, germinating seeds of O. ramosa released IAA as early as 24 h after the seeds were exposed to the germination stimulant, even before development of the germ tube. ABA levels remained unchanged during the germination of the parasites' seeds. The results presented here show that IAA production is probably part of a mechanism triggering germination upon the induction by the host factor, thus resulting in seed germination.

  9. Germination potential index of Sindh rice cultivars on biochemical ...

    African Journals Online (AJOL)

    use

    2011-12-14

    Dec 14, 2011 ... Alpha amylase activities were found to be directly correlated with germination percentage. Gradual increase in reducing sugars along with α-amylase activity was observed, while total ... seed vigor and alpha amylase activity along with germination period. .... strates for energy generation for fast and uniform.

  10. Temperature and substrate on Plukenetia volubilis L. seed germination

    Directory of Open Access Journals (Sweden)

    Givanildo Z. da Silva

    Full Text Available ABSTRACT The objective of this work was to evaluate the effect of temperature and substrate on the germination of P. volubilis seeds. Seeds harvested from 25 matrix plants were submitted, in two studies, to conditions of (i sowing in rolled paper towel at the temperatures of 10, 15, 20, 25, 30, 35, 40, and 45 °C, for the evaluation of germination, first count of germination, germination speed index and mean time for germination, and (ii sowing in the substrates paper towel, sand, Bioplant®, Bioplant® and micron, superfine, fine, medium and coarse vermiculite. The same evaluations mentioned in the first study were conducted at the temperature of 30 oC, as well as plant growth. The treatment replicates were distributed in a completely randomized block design and the effects of temperature were compared by polynomial regression analysis. The substrates were compared by the Scott-Knott test at 0.05 probability level. The data show that the ideal range of temperature for the germination of P. volubilis is between 25 and 30 °C. The temperature of 20 °C is the minimum for germination and those above 35 °C are lethal to these seeds. The most favorable substrate for P. volubilis seed germination is micron or fine vermiculite.

  11. Effects of hydropriming on seed germination and seedling growth in ...

    African Journals Online (AJOL)

    The germination of Salvia officinalis L. (sage) seeds is a problem of great concern that may be overcome by employing seed priming techniques. Seed priming is an efficient technique for improvement of seed vigor, increasing germination and seedling growth. Little information has been reported on seedling development ...

  12. Tetrazolium chloride as an indicator of pine pollen germinability

    Science.gov (United States)

    Stanton A. Cook; Robert G. Stanley

    1960-01-01

    Controlled pollination in forest tree breeding requires pollen of known germination capacity. Methods of determining pollen viability include germination in a hanging drop, in a moist atmosphere, on agar gel, or in a sugar solution (DUFFIELD, 1954; DILLON et al., 1957). Errors commonly arise in the application of these techniques because maximum...

  13. Variability of Germinative Potential among Pathogenic Species of Aspergillus

    OpenAIRE

    Araujo, Ricardo; Rodrigues, Acacio Gonçalves

    2004-01-01

    The objective of our study was to evaluate parameters influencing the germination of Aspergillus conidia. Inoculum concentration and age significantly influenced germination. Different incubation temperatures revealed significant differences among Aspergillus species. The internal human milieu provides the ideal conditions for the development of invasive disease by Aspergillus fumigatus but restricts invasion by Aspergillus flavus and Aspergillus niger.

  14. Mapping QTLs for submergence tolerance during germination in rice

    African Journals Online (AJOL)

    STORAGESEVER

    2008-08-04

    Aug 4, 2008 ... Key words: Oryza sativa L, anaerobic germination, QTL analysis. INTRODUCTION. Two main ... The study was conducted at NG-01 greenhouse, Genome and. Mapping (GML), the .... ABC transporter family protein ..... differences of germination habits in rice seeds with special reference to plant breeding (in ...

  15. Pollen characteristics and in vitro pollen germination of Cedrus ...

    African Journals Online (AJOL)

    PRECIOUS

    2009-11-02

    Nov 2, 2009 ... This study aims to determine the germination characteristics, pollen tube developments, effects of germination media and temperature and incubation durations of the pollens obtained from the four clones (11342, 11344, 11345 and 11351) of Cedrus libani A. Rich. (Lebanon Cedrus) obtained from clonal.

  16. Salt tolerance of physalis during germination and seedling growth

    International Nuclear Information System (INIS)

    Yildirim, E.; Karlidag, H.

    2011-01-01

    The study was conducted to evaluate the effect of NaCl salinity on germination and emergence of Physalis ixocarpa and Physalis peruviana. Seeds of P. ixocarpa and P. peruviana were germinated by the use of 0, 30, 60, 90, 120 and 180 mM NaCl solutions in petri dishes. Final germination percentage (FGP) decreased with the increase in NaCl concentration. Both species germinated at the ranges of salinity. P. peruviana gave the greater germination percentages under salt stress than P. ixocarpa. NaCl salinity at different concentrations adversely affected germination rates. For seedling growth, seeds of both species were sown at 10 mm depth in plastic trays filled with peat to determine final emergence percentage (FEP). The trays were irrigated manually to saturation every day with 0, 30, 60, 90, 120, 150 or 180 mM NaCl solutions to maintain the level of salinity. Salinity affected seed emergence and seedlings growth more than seed germination. The study showed that no emergence of Physalis was observed at 90, 120 and 180 mM NaCl salinity. Fresh and dry weights of normal seedlings were also evaluated. Salt stress significantly decreased the plant fresh and dry weight of both species. Based on the results of the experiment, it can be concluded that seedling emergence and growth is more sensitive to salt stress than seed germination in Physalis. (author)

  17. Reinstatement of "germinal epithelium" of the ovary

    Directory of Open Access Journals (Sweden)

    Nishida Naoyo

    2006-08-01

    Full Text Available Abstract Background The existing dogma that the former term ovarian "germinal epithelium" resulted from a mistaken belief that it could give rise to new germ cells is now strongly challenged. Discussion Two years ago, a research group of the University of Tennessee led by Antonin Bukovsky successfully demonstrated the oogenic process from the human ovarian covering epithelium now commonly called the ovarian surface epithelium. They showed the new oocyte with zona pellucida and granulosa cells, both originated from the surface epithelium arising from mesenchymal cells in the tunica albuginea, and stressed that the human ovary could form primary follicles throughout the reproductive period. This gives a big impact not only to the field of reproductive medicine, but also to the oncologic area. The surface epithelium is regarded as the major source of ovarian cancers, and most of the neoplasms exhibit the histology resembling müllerian epithelia. Since the differentiating capability of the surface epithelium has now expanded, the histologic range of the neoplasms in this category may extend to include both germ cell tumors and sex cord-stromal cell tumors. Summary Since the oogenic capability of ovarian surface cells has been proven, it is now believed that the oocytes can originate from them. The term "germinal epithelium", hence, might reasonably be reinstated.

  18. Introduction of Endophytic Pseudomonas rhodesiae and Acinetobacter sp. Effective on Seed Germination and Cucumber Growth Factors Improvement

    Directory of Open Access Journals (Sweden)

    Farkhondeh Amini

    2017-03-01

    Full Text Available Introduction: Some bacteria are capable of entering the plant as endophytes that do not cause harm and could establish a mutualistic association with host plants. Endophytic bacteria are bacteria that live in plant tissues without doing substantive harm. They enter plant tissue primarily through different plant zones. Both Gram-positive and Gram-negative bacteria have been isolated from several tissue types in several plant species. In addition, several different bacterial species have been isolated from a single plant. Variation in endophytic bacteria populations referred to the time of sampling, type of plant tissue, age and environment conditions, as well. In general endophytic bacteria occur at lower population densities than rhizospheric bacteria or bacterial pathogens. Endophytic populations, like rhizospheric populations, are conditioned by biotic and abiotic factors, but endophytic bacteria could be better protected from biotic and abiotic stresses than rhizospheric bacteria. It is clear that the interaction between plants and some endophytic bacteria is associated with beneficial effects such as plant growth promotion and biocontrol potential against plant pathogens. These types of bacteria are often capable of eliciting significant physiological changes that modulate the growth and development of the plant. Most of the time, these beneficial effects of endophytes are greater than those of many rhizosphere-colonizing bacteria. Endophytic bacteria affect bacterial growth by numerous mechanisms directly or indirectly. Some genus of bacteria such as Azosprillium, Enterobacter, Azotobacter and Pseudomonas produces plant growth regulators which lead to plant growth improvement. Microorganism profit from plants due to the enhanced availability of nutrients, whereas plants can receive benefits from bacterial associates by growth enhancement or stress reduction. Therefore, mutualistic interactions between host plants and associated

  19. Starch bioengineering affects cereal grain germination and seedling establishment

    DEFF Research Database (Denmark)

    Shaik, Shahnoor Sultana; Carciofi, Massimiliano; Martens, Helle Juel

    2014-01-01

    Cereal grain germination is central for plant early development, and efficient germination has a major role in crop propagation and malting. Endosperm starch is the prime energy reserve in germination and seedling establishment. In this study, it was hypothesized that optimized starch granule...... structure, and not only the endosperm starch content per se, is important for germination and seedling establishment. For that purpose, wild-type (WT), and specifically engineered degradable hyperphosphorylated (HP) starch and more resistant amylose-only (AO) starch barley lines were used. The transgenics...... showed no severe phenotypes and the WT and HP lines degraded the starch similarly, having 30% residual starch after 12 d of germination. However, the AO line showed significant resistance to degradation, having 57% residual starch. Interestingly, protein and β-glucan (BG) degradation was stimulated...

  20. Germination, carbohydrate composition and vigor of cryopreserved Caesalpinia echinata seeds

    Directory of Open Access Journals (Sweden)

    Rafael Fonsêca Zanotti

    2012-10-01

    Full Text Available The present study investigated the germination and vigor of Caesalpinia echinata (Brazilwood seeds stored at negative temperatures. Recently harvested seeds were cryopreserved at -18º or -196ºC and periodically evaluated for germination, seed vigor and carbohydrate composition. The temperatures did not influence the germination percentages or vigor. The germination percentage decreased from 88% in recently harvested seeds to 60% after 730 days of storage. The different temperature and storage times tested did not affect the vigor seed germination as indicated by the measures of plant growth and survival. The different temperatures used did not cause changes in the carbohydrate composition. The tegument cell walls were rich in lignin, arabinose and xylose. The cytoplasm of the cotyledons and embryos had high levels of glucose, fructose, and sucrose. The cryopreservation technique here presented was effective in the conservation of Brazilwood seeds for the medium term.

  1. Alkaliphilic Bacillus species show potential application in concrete crack repair by virtue of rapid spore production and germination then extracellular calcite formation.

    Science.gov (United States)

    Sharma, T K; Alazhari, M; Heath, A; Paine, K; Cooper, R M

    2017-05-01

    Characterization of alkaliphilic Bacillus species for spore production and germination and calcite formation as a prelude to investigate their potential in microcrack remediation in concrete. Conditions, extent and timing of endospore production was determined by dark-field light microscopy; germination induction and kinetics were assessed by combining reduction in optical density with formation of refractile bodies by phase-contrast microscopy. Bacillus pseudofirmus was selected from several species as the most suitable isolate. Levels and timing of calcium carbonate precipitated in vitro by B. pseudofirmus were evaluated by atomic absorption spectroscopy and structural identity confirmed as calcite and aragonite by Raman spectroscopy and FTIR. The isolate produced copious spores that germinated rapidly in the presence of germinants l-alanine, inosine and NaCl. Bacterial cells produced CaCO 3 crystals in microcracks and the resulting occlusion markedly restricted water ingress. By virtue of rapid spore production and germination, calcium carbonate formation in vitro and in situ, leading to sealing of microcracks, B. pseudofirmus shows clear potential for remediation of concrete on a commercial scale. Microbial sealing of microcracks should become a practicable and sustainable means of increasing concrete durability. © 2017 The Authors. Journal of Applied Microbiology published by John Wiley & Sons Ltd on behalf of The Society for Applied Microbiology.

  2. The effect of plant growth promoting rhizobacteria on Datura stramonium L., Abutilon theophrasti Med., Onopordon acanthium L. and Verbascum thapsus L. seed germination

    Directory of Open Access Journals (Sweden)

    Dragana Božić

    2014-09-01

    Full Text Available The effects of several bacterial media [Bacillus licheniformis population 1 (MO1; B. licheniformis population 2 (MO2; B. subtilis (MO3; B. megatherium (MO4; humates (MO5] on seed germination of Datura stramonium L., Abutilon theophrasti Med., Onopordon acanthium L. and Verbascum thapsus L. were tested. Seeds were germinated in Petri dishes containing solutions with different bacterial media. The highest germination percentage in all treatments was recorded for V. thapsus seeds (100.0%. Different treatments had diverse effects (stimulative or inhibitory on seed germination of D. stramonium [from 5% (MO1 to 13.3% (MO3, with 10.0 % in H20], A. theophrasti [from 28.3% (MO3 to 65.0% (MO5, with 43.3 % in H20] and O. acanthium [from 10.0% (MO2 to 13.3% (MO1 and MO3, with 6.7% in H20], depending on the type of media and weed species.

  3. [Expression and purification of a novel thermophilic bacterial single-stranded DNA-binding protein and enhancement the synthesis of DNA and cDNA].

    Science.gov (United States)

    Jia, Xiao-Wei; Zhang, Guo-Hui; Shi, Hai-Yan

    2012-12-01

    Express a novel species of single-stranded DNA-binding protein (SSB) derived from Thermococcus kodakarensis KOD1, abbreviated kod-ssb. And evaluate the effect of kod-ssb on PCR-based DNA amplification and reverse transcription. We express kod-ssb with the Transrtta (DE3), and kod-ssb was purified by affinity chromatography on a Ni2+ Sepharose column, detected by SDS-PAGE. To evaluate the effect of kod-ssb on PCR-based DNA amplification, the human beta globin gene was used as template to amplify a 5-kb, 9-kb and 13-kb. And to detect the effect of kod-ssb on reverse transcription, we used RNA from flu cell culture supernatant extraction as templates to implement qRT-PCR reaction. The plasmid pET11a-kod was transformed into Transetta (DE3) and the recombinant strain Transetta (pET11 a-kod) was obtained. The kod-ssb was highly expressed when the recombinant strain Transetta(pET11a-kod) was induced by IPTG. The specific protein was detected by SDS-PAGE. To confirm that kod-ssb can enhance target DNA synthesis and reduce PCR by-products, 5-, 9-, and 13-kb human beta globin gene fragments were used as templates for PCR. When PCR reactions did not include SSB proteins, the specific PCR product was contaminated with non-specific products. When kod -ssb was added, kod-ssb significantly enhanced amplification of the 5-, 9-and 13-kb target product and minimised the non-specific PCR products. To confirm that kod-ssb can enhance target cDNA synthesis, RNA from flu cell culture supernatant extraction was used as templates for qRT-PCR reaction. The results was that when kod-ssb was added, kod-ssb significantly enhanced the synthesis of cDNA, average Ct value is 19.42, and the average Ct value without kod-ssb is 22.15. kod-ssb may in future be used to enhance DNA and cDNA amplification.

  4. Pre-treating Seed to Enhance Germination of Desert Shrubs

    Energy Technology Data Exchange (ETDEWEB)

    W. K. Ostler; D. C. Anderson; D. J. Hansen

    2002-06-01

    Creosotebush [Larrea tridentata (D.C.) Cav.] and white bursage [Ambrosia dumosa (A. Gray) W.W. Payne] seeds were subjected to pre-treatments of rinsing and soaking in water and thiourea to enhance germination in laboratory experiments. The effects of darkness, temperature, seed source, and soil moisture were also evaluated in the laboratory. The best pre-treatment from the laboratory experiments, rinsing with water for 36 hours followed by drying, was field-tested at Fort Irwin, California. Two sites and two seeding dates (early March and mid April) were determined for each site. Five mulch treatments (no mulch, straw, gravel, chemical stabilizer, and plastic) were evaluated in combination with the seed pre-treatments. Field emergence was greatly enhanced with the seed pre-treatment for white bursage during the March (18-42% increase in germination) and April seedings (16-23% increase in germination). Creosotebush showed poor germination during March (2-5%) when soil temperatures averaged 15 C, but germination increased during the April trials (6-43%) when soil temperatures averaged 23 C. The seed pre-treatment during the April trials increased germination from 16-23%. The plastic mulch treatment increased germination dramatically during both the March and April trials. The plastic mulch increased soil temperatures (8-10 C)and maintained high humidity during germination. Both the chemical stabilizer and the gravel mulches improved germination over the control while the straw mulch decreased germination. These results suggest that seed pre-treatments combined with irrigation and mulch are effective techniques to establish these two dominant Mojave Desert species from seed.

  5. Bacterial computing with engineered populations.

    Science.gov (United States)

    Amos, Martyn; Axmann, Ilka Maria; Blüthgen, Nils; de la Cruz, Fernando; Jaramillo, Alfonso; Rodriguez-Paton, Alfonso; Simmel, Friedrich

    2015-07-28

    We describe strategies for the construction of bacterial computing platforms by describing a number of results from the recently completed bacterial computing with engineered populations project. In general, the implementation of such systems requires a framework containing various components such as intracellular circuits, single cell input/output and cell-cell interfacing, as well as extensive analysis. In this overview paper, we describe our approach to each of these, and suggest possible areas for future research. © 2015 The Author(s) Published by the Royal Society. All rights reserved.

  6. Salinity on the germination of seed and index of germination speed of three ornamental species

    Directory of Open Access Journals (Sweden)

    Marcos Vieira Ferraz

    2016-09-01

    Full Text Available Salinity is a factor that interferes on seed germination in most species. The objective of this work was to study the effects of different concentrations of NaCl on the emergence and vigor of Petunia x hybrida hort. Vilm E. ex., Torenia fournieri Lind and Tagetes patula L. seedlings. The experimental design was entirely randomized with five treatments (five concentrations of NaCl: zero, 25, 50, 75 and 100 mM and four replications of 50 seeds, for each species. The seeds were germinated in germitest paper at the alternating temperature of 20-30°C. Emergence (% and Emergence Rate (ER were performed daily until 14 days. Salt stress caused negative effects on the emergence and vigor on seedlings of these three ornamentals species.

  7. Germination conditions affect selected quality of composite wheat-germinated brown rice flour and bread formulations.

    Science.gov (United States)

    Charoenthaikij, Phantipha; Jangchud, Kamolwan; Jangchud, Anuvat; Prinyawiwatkul, Witoon; Tungtrakul, Patcharee

    2010-08-01

    Brown rice has been reported to be more nutritious after germination. Germinated brown rice flours (GBRFs) from different steeping conditions (in distilled water [DI, pH 6.8] or in a buffer solution [pH 3] for either 24 or 48 h at 35 degrees C) were evaluated in this study. GBRF obtained from brown rice steeped at pH 3 for 48 h contained the highest amount of free gamma aminobutyric acid (GABA; 67 mg/100 g flour). The composite flour (wheat-GBRF) at a ratio of 70 : 30 exhibited significantly lower peak viscosity (PV) (56.99 - 132.45 RVU) with higher alpha-amylase activity (SN = 696 - 1826) compared with those of wheat flour (control) (PV = 136.46 RVU and SN = 1976). Bread formulations, containing 30% GBRF, had lower loaf volume and greater hardness (P rice flour (BRF). Acceptability scores for aroma, taste, and flavor of breads prepared with or without GBRFs (30% substitution) were not significantly different, with the mean score ranging from 6.1 (like slightly) to 7 (like moderately). Among the bread formulations containing GBRF, the one with GBRF prepared after 24 h steeping at pH 3 had a slightly higher (though not significant) overall liking score (6.8). This study demonstrated that it is feasible to substitute wheat flour with up to 30% GBRF in bread formulation without negatively affecting sensory acceptance. Practical Application: Our previous study revealed that flours from germinated brown rice have better nutritional properties, particularly gamma-aminobutyric acid (GABA), than the nongerminated one. This study demonstrated feasibility of incorporating up to 30% germinated brown rice flour in a wheat bread formulation without negatively affecting sensory acceptance. In the current United States market, this type of bread may be sold as frozen bread which would have a longer shelf life. Further study is thus needed.

  8. Germination of tropical forage seeds stored for six years in ambient and controlled temperature and humidity conditions in Thailand

    Directory of Open Access Journals (Sweden)

    Michael D. Hare

    2018-01-01

    Full Text Available The germination performances of fresh seed lots were determined for 5 tropical forage species: Mulato II hybrid brachiaria [Urochloa ruziziensis (syn. Brachiaria ruziziensis x U. decumbens (syn. B. decumbens x U. brizantha (syn. B. brizantha], Mombasa guinea [Megathyrsus maximus (syn. Panicum maximum], Tanzania guinea [M. maximus (syn. P. maximum], Ubon paspalum (Paspalum atratum and Ubon stylo (Stylosanthes guianensis, stored under ambient conditions in Thailand (mean monthly temperatures 23‒34 ºC; mean monthly relative humidity 40‒92% or in a cool room (18‒20 ºC and 50% relative humidity for up to 6 years. The first paper of this study showed all seeds, except unscarified Ubon stylo seed, were dead after a single year of storage in ambient conditions. This second paper shows that cool-room storage extended seed viability, but performance varied considerably between species. Germination percentage under laboratory conditions declined to below 50%, after 3 years storage for Mombasa guinea seed and Tanzania guinea seed, 4 years for Ubon paspalum seed and 4‒5 years for Mulato II seed. Ubon stylo seed maintained high germination for 5 years, in both cool-room storage (96% and ambient-room storage (84%. Apparent embryo dormancy in acid-scarified Mulato II seed steadily increased with time in cool-storage and this seed had to be acid-scarified again each year at the time of germination testing to overcome dormancy. Physical dormancy of Mulato II seeds, imposed by the tightly bound lemma and palea in unscarified seed, was not overcome by length of time in cool-storage and these seeds had to be acid-scarified to induce germination. Hardseeded percentage in Ubon stylo seed remained high throughout the study and could be overcome only by acid-scarification. The difficulties of maintaining acceptable seed germination percentages when storing forage seeds in the humid tropics are discussed.

  9. Effect of Different Germination Conditions on Antioxidative Properties and Bioactive Compounds of Germinated Brown Rice

    Directory of Open Access Journals (Sweden)

    You-Tung Lin

    2015-01-01

    Full Text Available This study investigates antioxidative activity and bioactive compounds of ungerminated brown rice (UBR and germinated brown rice (GBR. We used two rice cultivars (Oryza sativa L., Taiwan Japonica 9 (TJ-9 and Taichung Indica 10 (TCI-10, as the materials in our experiments. The conditions for inducing germination are soaking time in water 24, 48, or 72 h; temperature 26 or 36°C; incubation in light or darkness; and open or closed vessels, in which the antioxidative activities and bioactive compounds of GBR were determined. We found that, in order to maximize antioxidative activity and bioactive compounds, germination should be under higher temperature (36°C, long soaking time (72 h, darkness, and closed vessel. GBR contains much higher levels of antioxidative activity and bioactive compounds than ungerminated brown rice (UBR. We found a strong correlation between antioxidative activities (DPPH radical scavenging ability, reducing power, and Trolox equivalent antioxidant capacity and bioactive compounds (γ-oryzanols, tocopherol, and tocotrienol. Higher temperature (36°C is also conducive to the production of GABA in GBR. These results are considered very useful research references for the development of future functional foods and additives.

  10. Differential Control Efficacies of Vitamin Treatments against Bacterial Wilt and Grey Mould Diseases in Tomato Plants

    Directory of Open Access Journals (Sweden)

    Jeum Kyu Hong

    2016-10-01

    Full Text Available Bacterial wilt and grey mould in tomato plants are economically destructive bacterial and fungal diseases caused by Ralstonia solanacearum and Botrytis cinerea, respectively. Various approaches including chemical and biological controls have been attempted to arrest the tomato diseases so far. In this study, in vitro growths of bacterial R. solanacearum and fungal B. cinerea were evaluated using four different vitamins including thiamine (vitamin B1, niacin (vitamin B3, pyridoxine (vitamin B6, and menadione (vitamin K3. In planta efficacies of the four vitamin treatments on tomato protection against both diseases were also demonstrated. All four vitamins showed different in vitro antibacterial activities against R. solanacearum in dose-dependent manners. However, treatment with 2 mM thiamine was only effective in reducing bacterial wilt of detached tomato leaves without phytotoxicity under lower disease pressure (10⁶ colony-forming unit [cfu]/ml. Treatment with the vitamins also differentially reduced in vitro conidial germination and mycelial growth of B. cinerea. The four vitamins slightly reduced the conidial germination, and thiamine, pyridoxine and menadione inhibited the mycelial growth of B. cinerea. Menadione began to drastically suppress the conidial germination and mycelial growth by 5 and 0.5 mM, respectively. Grey mould symptoms on the inoculated tomato leaves were significantly reduced by pyridoxine and menadione pretreatments one day prior to the fungal challenge inoculation. These findings suggest that disease-specific vitamin treatment will be integrated for eco-friendly management of tomato bacterial wilt and grey mould.

  11. Differential Control Efficacies of Vitamin Treatments against Bacterial Wilt and Grey Mould Diseases in Tomato Plants.

    Science.gov (United States)

    Hong, Jeum Kyu; Kim, Hyeon Ji; Jung, Heesoo; Yang, Hye Ji; Kim, Do Hoon; Sung, Chang Hyun; Park, Chang-Jin; Chang, Seog Won

    2016-10-01

    Bacterial wilt and grey mould in tomato plants are economically destructive bacterial and fungal diseases caused by Ralstonia solanacearum and Botrytis cinerea , respectively. Various approaches including chemical and biological controls have been attempted to arrest the tomato diseases so far. In this study, in vitro growths of bacterial R. solanacearum and fungal B. cinerea were evaluated using four different vitamins including thiamine (vitamin B1), niacin (vitamin B3), pyridoxine (vitamin B6), and menadione (vitamin K3). In planta efficacies of the four vitamin treatments on tomato protection against both diseases were also demonstrated. All four vitamins showed different in vitro antibacterial activities against R. solanacearum in dose-dependent manners. However, treatment with 2 mM thiamine was only effective in reducing bacterial wilt of detached tomato leaves without phytotoxicity under lower disease pressure (10 6 colony-forming unit [cfu]/ml). Treatment with the vitamins also differentially reduced in vitro conidial germination and mycelial growth of B. cinerea . The four vitamins slightly reduced the conidial germination, and thiamine, pyridoxine and menadione inhibited the mycelial growth of B. cinerea . Menadione began to drastically suppress the conidial germination and mycelial growth by 5 and 0.5 mM, respectively. Grey mould symptoms on the inoculated tomato leaves were significantly reduced by pyridoxine and menadione pretreatments one day prior to the fungal challenge inoculation. These findings suggest that disease-specific vitamin treatment will be integrated for eco-friendly management of tomato bacterial wilt and grey mould.

  12. Evolution of nutrient ingredients in tartary buckwheat seeds during germination.

    Science.gov (United States)

    Yiming, Zhou; Hong, Wang; Linlin, Cui; Xiaoli, Zhou; Wen, Tang; Xinli, Song

    2015-11-01

    Evolution of nutrient components and the antioxidative activity of seed sprouts of tartary buckwheat (Fagopyrum tataricum L. Gaertn) were investigated in the course of germination. Results showed that the contents of total flavonoids increased with germination time and leveled off after the third germination day with the changing trend of rutin and quercetin opposite to each other. The decrease of total protein and total sugar contents in the germinated seeds was accompanied respectively by an increase of amino acid and reducing sugar contents. The contents of vitamin C (Vc) and B1(V(B1)) exhibited a minimum with no appreciable changes found for vitamin B(2) (V(B2)) and B(6) (V(B6)). The contents of total chlorophyll, chlorophyll A and B all exhibited a maximum on the fifth germination day. The contents of fatty acids had no regular changing trend with germination time. The free radical-scavenging activities of the seeds increased with germination time and were caused by an increase in their antioxidative activity. Copyright © 2015 Elsevier Ltd. All rights reserved.

  13. Ecophysiology of seed germination in Digitaria insularis ((L. Fedde

    Directory of Open Access Journals (Sweden)

    Giovana Soares de Mendonça

    Full Text Available The invasive behaviour of sourgrass (Digitaria insularis in cultivated areas is due to its strategy of aggressive regeneration, which is based on seed germination. Knowledge of the physiological ecology of this species can contribute to the development of management and control strategies. The aim of this research was to understand the effects of provenance, temperature and light on the germination of sourgrass seeds collected in the Brazilian state of São Paulo in the cities of Americana, Botucatu and São José do Rio Preto and in the state of Paraná in the city of São Miguel do Iguaçu. The seeds were left to germinate at temperatures of 15, 25, 35 and 45 °C, both with and without light. The number of normal seedlings was recorded daily from seven to 60 days. After this period, the seeds together with substrate, were transferred to 25 ºC with light, and a daily count was made for all treatments until the end of germination (75 days after sowing. The seeds of D. insularis are positively photoblastic. Seed germination in this species depends on provenance. A temperature of 4 5 °C for germination is lethal to the seeds. The temperature of 35 °C in the presence of light is the most favourable condition for seed germination.

  14. [Study on conditions of seed germination of Cistanche].

    Science.gov (United States)

    Qiao, Xue-Yi; Wang, Hua-Lei; Guo, Yu-Hai

    2007-09-01

    To study the effect of fluridone concentration, stimulating period, temperature and salt on the seed germination of three species of Cistanche. The seeds were cultured in Petri dish, and the germination percentage was counted. The highest germination percentage was observed in Cistanche tubulosa, C. deserticola, C. sala seeds pre-treated by 0.1 mg x L(-1) fluridone for 24-29 h. The optimal temperature for the seeds germination of three species of Cistanche was at 20-30 degrees C, and the seeds did not germinate at sub-or supraoptimal temperatures (5 and 35 degrees C). The salt tolerance of C. sala seeds was strong, and the critical value of NaCl concentration was 0.04 mol x L(-1). By contrast, C. tubulosa and C. deserticola seeds were more sensitive to the salt stress, the critical value of NaCl concentration was 0.02 mol x L(-1). The optimal germination condition and the method of testing germination percentage of three species of Cistanche seeds are as follow: the seeds are pre-treated by 0.1 mg x L(-1) fluridone for 24 h and then cultured at 20-30 degrees C in salt solution which concentration is lower than 0.02 mol x L(-1).

  15. [Study on physiological and germination characteristics of Tulipa edulis seed].

    Science.gov (United States)

    Wu, Zhengjun; Zhu, Zaibiao; Guo, Qiaosheng; Ma, Hongliang; Xu, Hongjian; Miao, Yuanyuan

    2012-03-01

    Current study was conducted to investigate the seed physiological characteristics of Tulipa edulis and improve germination rate. Anatomical characteristics was observed. Seed water absorption curve was tested by soaking method. Dynamic of embryo development and germination rate as well as germination index under different conditions were recorded. And the biological test of cabbage seed was used for detecting the germination inhibitors. The embryo rate of newly matured seeds was about 10%, and there was no obstacle of water absorption on testa of T. edulis. The optimum method for embryo development was exposure to 300 mg x L(-1) gibberellin solution for 24 hours, and stratification at 25 degrees C for 70 days followed by stratification at 5 degrees C for 40 days. The germintion rate and germination index of dormancy-broken seeds under the dark environment at 10 degrees C and 15 degrees C were significantly higher than those under other conditions. Additionally, there were some germination inhibitory substances in dry seeds. The seed of T. edulis can be classified as having complex morphophysiological dormancy, and the morphological embryo dormancy played a leading role. Warm and cold stratification resulted in a fast dormancy breaking effect, and a high germination rate more than 90% could be obtained under the optimum conditions.

  16. Optimization of jenipapo in vitro seed germination process

    Directory of Open Access Journals (Sweden)

    Rafaela Ribeiro de Souza

    Full Text Available ABSTRACT The in vitro seed germination is an effective alternative for quickly obtaining explants with sanitary quality. However, jenipapo seeds present slow and uneven germination. Therefore, internal and external factors to seed which directly interfere in the process, they must be identified, in order to adapt better techniques to obtain seedlings. In this sense, this work aimed to optimize the in vitro germination of Genipa americana L. seeds by evaluating different factors (light quality, GA3 treatment, pre-soaking in distilled water, growing media and stratification in the dark. It was found that the seed germination of G. americana was indifferent to light, however, the best results were obtained under conditions of continuous darkness; There was no effect of the application of exogenous GA3; The pre-soaking in distilled water for 48 h contributes to obtaining better germination rates; And the reduction in MS medium salts, and laminating the pretreatment in the dark maximizes the germination potential of seeds.Therefore, the optimal conditions for in vitro germination of G. americana L. seeds requires pre-soaking in distilled water for 48 hours and inoculation into culture media consisting of 1/2 MS + 15 g L-1 sucrose, with stratification in the dark for 16 days, followed by the transfer to growth chambers with lighting provided by white fluorescent lamps.

  17. The Effect of Seasonal Ambient Temperatures on Fire-Stimulated Germination of Species with Physiological Dormancy: A Case Study Using Boronia (Rutaceae)

    Science.gov (United States)

    Auld, Tony D.; Keith, David A.; Hui, Francis K. C.; Ooi, Mark K. J.

    2016-01-01

    Dormancy and germination requirements determine the timing and magnitude of seedling emergence, with important consequences for seedling survival and growth. Physiological dormancy is the most widespread form of dormancy in flowering plants, yet the seed ecology of species with this dormancy type is poorly understood in fire-prone vegetation. The role of seasonal temperatures as germination cues in these habitats is often overlooked due to a focus on direct fire cues such as heat shock and smoke, and little is known about the combined effects of multiple fire-related cues and environmental cues as these are seldom assessed in combination. We aimed to improve understanding of the germination requirements of species with physiological dormancy in fire-prone floras by investigating germination responses across members of the Rutaceae from south eastern Australia. We used a fully factorial experimental design to quantify the individual and combined effects of heat shock, smoke and seasonal ambient temperatures on germination of freshly dispersed seeds of seven species of Boronia, a large and difficult-to-germinate genus. Germination syndromes were highly variable but correlated with broad patterns in seed morphology and phylogenetic relationships between species. Seasonal temperatures influenced the rate and/or magnitude of germination responses in six species, and interacted with fire cues in complex ways. The combined effects of heat shock and smoke ranged from neutral to additive, synergistic, unitive or negative and varied with species, seasonal temperatures and duration of incubation. These responses could not be reliably predicted from the effect of the application of single cues. Based on these findings, fire season and fire intensity are predicted to affect both the magnitude and timing of seedling emergence in wild populations of species with physiological dormancy, with important implications for current fire management practices and for population

  18. Ectopic germinal center and megalin defect in primary Sjogren syndrome with renal Fanconi syndrome.

    Science.gov (United States)

    Wang, Jing; Wen, Yubing; Zhou, Mengyu; Shi, Xiaoxiao; Jiang, Lanping; Li, Mingxi; Yu, Yang; Li, Xuemei; Li, Xuewang; Zhang, Wen; Lundquist, Andrew L; Chen, Limeng

    2017-06-02

    This study reports the clinical and pathological features of 12 cases of primary Sjogren syndrome (pSS) with renal involvement presenting with proximal tubular dysfunction in a single center, and investigates the possible correlation of ectopic germinal center formation and megalin/cubilin down-expression. Clinical and pathological records were reviewed. Immunohistochemistry was carried out to detect megalin, cubilin, CD21 and IL-17 expression. Patients presented with different degrees of proximal renal tubule lesion and decreased estimated glomerular filtration rate (eGFR). Renal biopsy revealed tubulointerstitial nephritis, with tubular epithelial cell degeneration, tubular atrophy, interstitial inflammation and focal fibrosis. Immunohistochemistry revealed decreased expression of megalin and cubilin, two important multiligand protein receptors on the brush border of proximal tubular epithelial cells. IL-17 secreted by Th17 subtype effector T cells was diffusely detected in the renal proximal tubule, with a negative correlation of IL-17 and megalin expression. In addition, ectopic germinal centers characterized by CD21 + follicular dendritic cells were present in the renal interstitium. In patients with a decreased eGFR, treatment with 4 weeks of glucocorticoid therapy resulted in an improved eGFR in 75% of patients. We report 12 cases of pSS characterized by Fanconi syndrome. The decreased megalin and cubilin expression may contribute to the proximal tubular reabsorption defect, possibly secondary to Th17 infiltration and formation of ectopic germinal centers.

  19. Isolation and characterization of the gene encoding the starch debranching enzyme limit dextrinase from germinating barley

    DEFF Research Database (Denmark)

    Kristensen, Michael; Lok, Finn; Planchot, Véronique

    1999-01-01

    with a value of 105 kDa estimated by SDS;;PAGE, The coding sequence is interrupted by 26 introns varying in length from 93 bp to 825 bp. The 27 exons vary in length from 53 bp to 197 bp. Southern blot analysis shows that the limit dextrinase gene is present as a single copy in the barley genome. Gene......The gene encoding the starch debranching enzyme limit dextrinase, LD, from barley (Hordeum vulgare), was isolated from a genomic phage library using a barley cDNA clone as probe. The gene encodes a protein of 904 amino acid residues with a calculated molecular mass of 98.6 kDa. This is in agreement...... expression is high during germination and the steady state transcription level reaches a maximum at day 5 of germination. The deduced amino acid sequence corresponds to the protein sequence of limit dextrinase purified from germinating malt, as determined by automated N-terminal sequencing of tryptic...

  20. Role of protein and mRNA oxidation in seed dormancy and germination

    Directory of Open Access Journals (Sweden)

    hayat eel-maarouf-bouteau

    2013-04-01

    Full Text Available Reactive oxygen species (ROS are key players in the regulation of seed germination and dormancy. Although their regulated accumulation is a prerequisite for germination, the cellular basis of their action remains unknown, but very challenging to elucidate due to the lack of specificity of these compounds that can potentially react with all biomolecules. Among these, nucleic acids and proteins are very prone to oxidative damage. RNA is highly sensitive to oxidation because of its single-stranded structure and the absence of a repair system. Oxidation of mRNAs induces their decay through processing bodies or results in the synthesis of aberrant proteins through altered translation. Depending on the oxidized amino acid, ROS damage of proteins can be irreversible (i.e. carbonylation thus triggering the degradation of the oxidized proteins by the cytosolic 20S proteasome or can be reversed through the action of thioredoxins, peroxiredoxins or glutaredoxins (cysteine oxidation or by methionine sulfoxide reductase (methionine oxidation. Seed dormancy alleviation in the dry state, referred to as after-ripening, requires both selective mRNA oxidation and protein carbonylation. Similarly, seed imbibition of non-dormant seeds is associated with targeted oxidation of a subset of proteins. Altogether, these specific features testify that such oxidative modifications play important role in commitment of the cellular functioning toward germination completion.

  1. Germination rate is the significant characteristic determining coconut palm diversity.

    Science.gov (United States)

    Harries, Hugh C

    2012-01-01

    This review comes at a time when in vitro embryo culture techniques are being adopted for the safe exchange and cryo-conservation of coconut germplasm. In due course, laboratory procedures may replace the options that exist among standard commercial nursery germination techniques. These, in their turn, have supplanted traditional methods that are now forgotten or misunderstood. Knowledge of all germination options should help to ensure the safe regeneration of conserved material. This review outlines the many options for commercial propagation, recognizes the full significance of one particular traditional method and suggests that the diversity of modern cultivated coconut varieties has arisen because natural selection and domestic selection were associated with different rates of germination and other morphologically recognizable phenotypic characteristics. The review takes into account both the recalcitrant and the viviparous nature of the coconut. The ripe fruits that fall but do not germinate immediately and lose viability if dried for storage are contrasted with the bunches of fruit retained in the crown of the palm that may, in certain circumstances, germinate to produce seedlings high above ground level. Slow-germinating and quick-germinating coconuts have different patterns of distribution. The former predominate on tropical islands and coastlines that could be reached by floating when natural dispersal originally spread coconuts widely-but only where tides and currents were favourable-and then only to sea-level locations. Human settlers disseminated the domestic types even more widely-to otherwise inaccessible coastal sites not reached by floating-and particularly to inland and upland locations on large islands and continental land masses. This review suggests four regions where diversity has been determined by germination rates. Although recent DNA studies support these distinctions, further analyses of genetic markers related to fruit abscission and

  2. Germination traits of three weed species in Kosovo

    Directory of Open Access Journals (Sweden)

    A. Mehmeti

    2010-02-01

    Full Text Available Amaranthus retroflexus, Echinochloa crus-galli and Datura stramonium are the most important weed species in Kosovo. They cause severe yield depression, contaminate fodder and negatively affect growth and reproduction of other weed species. To counteract these problems, specific strategies need to be developed. Such strategies should consider information on species germination traits. In this context, our study provides information on temperature requirements for germination. Seeds of A. retroflexus, E. crus-galli and D. stramonium were harvested in two sub-regions of Kosovo (western and eastern parts differing in climate and land use. They were set for germination experiments in growth chambers at temperatures ranging from 3 to 35 °C and under field conditions. In both experiments, the germination rate differed between species and provenances. In the growth chamber experiment, germination of all three species was negligible below 15 °C and reached the highest rates between 24 and 30 °C. Seeds originating from the western part of Kosovo had higher germination rates and required a lower temperature for germination than seeds originating from the eastern part. In the field experiment, the time-dependent germination behaviour of D. stramonium differed between provenances. In general, germination started when soil temperature was above 18 °C and continued as long as the soil was moist. The results are discussed in the context of the need to develop weed management strategies against these weeds in Kosovo.

  3. Germination rate is the significant characteristic determining coconut palm diversity

    Science.gov (United States)

    Harries, Hugh C.

    2012-01-01

    Rationale This review comes at a time when in vitro embryo culture techniques are being adopted for the safe exchange and cryo-conservation of coconut germplasm. In due course, laboratory procedures may replace the options that exist among standard commercial nursery germination techniques. These, in their turn, have supplanted traditional methods that are now forgotten or misunderstood. Knowledge of all germination options should help to ensure the safe regeneration of conserved material. Scope This review outlines the many options for commercial propagation, recognizes the full significance of one particular traditional method and suggests that the diversity of modern cultivated coconut varieties has arisen because natural selection and domestic selection were associated with different rates of germination and other morphologically recognizable phenotypic characteristics. The review takes into account both the recalcitrant and the viviparous nature of the coconut. The ripe fruits that fall but do not germinate immediately and lose viability if dried for storage are contrasted with the bunches of fruit retained in the crown of the palm that may, in certain circumstances, germinate to produce seedlings high above ground level. Significance Slow-germinating and quick-germinating coconuts have different patterns of distribution. The former predominate on tropical islands and coastlines that could be reached by floating when natural dispersal originally spread coconuts widely—but only where tides and currents were favourable—and then only to sea-level locations. Human settlers disseminated the domestic types even more widely—to otherwise inaccessible coastal sites not reached by floating—and particularly to inland and upland locations on large islands and continental land masses. This review suggests four regions where diversity has been determined by germination rates. Although recent DNA studies support these distinctions, further analyses of genetic markers

  4. Production and germination of Tussilago farfara (L. diaspores

    Directory of Open Access Journals (Sweden)

    Anna Namur-Ochocka

    2014-01-01

    Full Text Available In the paper the production of generative diaspores in Tussilago farfara (L. was assessed in four different ecological systems. Also their morphological characteristics, as well as their germinability under natural and laboratory conditions were analysed, depending upon the age, density and size of diaspores, as well as sowing depth, substrate type and light conditions. The studies showed that diaspores: 1 were highly germinable under laboratory conditions; 2 did not germinate effectively under natural conditions; 31 were short-lived; 4 were tolerant to unfavourable habitat agents. Tussilago farfara was determined to exhibit high diaspore production only under conditions of suppresed interspecific competition.

  5. Elemental variations in the germinating fungus Phytophthora palmivora

    International Nuclear Information System (INIS)

    Mazzolini, A.P.; Sealock, R.M.; Legge, G.J.F.; Grant, B.R.

    1991-01-01

    We have measured the elemental variations between zoospores and germinating cystospores of the fungus Phytophthora palmivora, using a scanning proton microprobe. Averaged over a number of individual cells, our results indicate that the level of Ca is much lower in germinating cystospores than in zoospores. The levels of S, Cl, and Zn also appear to be lower, and the level of K appears to be higher. The spatial distribution of elements within the germinating cystospore is very similar for P, S, Cl, K, Mn, Fe, and Cu, but significantly different for Ca and Zn. (orig.)

  6. Elemental variations in the germinating fungus Phytophthora palmivora

    Science.gov (United States)

    Mazzolini, A. P.; Grant, B. R.; Sealock, R. M.; Legge, G. J. F.

    1991-03-01

    We have measured the elemental variations between zoospores and germinating cystospores of the fungus Phytophthora palmivora, using a scanning proton microprobe. Averaged over a number of individual cells, our results indicate that the level of Ca is much lower in germinating cystospores than in zoospores. The levels of S, Cl, and Zn also appear to be lower, and the level of K appears to be higher. The spatial distribution of elements within the germinating cystospore is very similar for P, S, Cl, K, Mn, Fe, and Cu, but significantly different for Ca and Zn.

  7. Germination and development of pecan cultivar seedlings by seed stratification

    Directory of Open Access Journals (Sweden)

    Igor Poletto

    2015-12-01

    Full Text Available Abstract: The objective of this work was to evaluate the effect of seed stratification on germination rate, germination speed, and initial development of seedlings of six pecan (Carya illinoinensis cultivars under subtropical climatic conditions in southern Brazil. For stratification, the seeds were placed in boxes with moist sand, in a cold chamber at 4°C, for 90 days. In the fourteenth week after sowing, the emergence speed index, total emergence, plant height, stem diameter, and number of leaves were evaluated. Seed stratification significantly improves the germination potential and morphological traits of the evaluated cultivars.

  8. Effects of seed pretreatment and seed source on germination of five ...

    African Journals Online (AJOL)

    The effects of seed pre-sowing treatment and geographic source of seeds on three germination parameters of five Acacia species (GP = germination percent; GMT = germination mean time (days) and GI = germination index) were studied. Pre-sowing treatment included immersion in concentrated sulphuric acid for 5, 10 and ...

  9. 7 CFR 201.29 - Germination of vegetable seed in containers of 1 pound or less.

    Science.gov (United States)

    2010-01-01

    ... the percentage of germination and date of test. Each variety of vegetable seed which has a germination... 7 Agriculture 3 2010-01-01 2010-01-01 false Germination of vegetable seed in containers of 1 pound... (CONTINUED) FEDERAL SEED ACT FEDERAL SEED ACT REGULATIONS Labeling Vegetable Seeds § 201.29 Germination of...

  10. Asynchronous spore germination in isogenic natural isolates of Saccharomyces paradoxus.

    Science.gov (United States)

    Stelkens, Rike B; Miller, Eric L; Greig, Duncan

    2016-05-01

    Spores from wild yeast isolates often show great variation in the size of colonies they produce, for largely unknown reasons. Here we measure the colonies produced from single spores from six different wild Saccharomyces paradoxus strains. We found remarkable variation in spore colony sizes, even among spores that were genetically identical. Different strains had different amounts of variation in spore colony sizes, and variation was not affected by the number of preceding meioses, or by spore maturation time. We used time-lapse photography to show that wild strains also have high variation in spore germination timing, providing a likely mechanism for the variation in spore colony sizes. When some spores from a laboratory strain make small colonies, or no colonies, it usually indicates a genetic or meiotic fault. Here, we demonstrate that in wild strains spore colony size variation is normal. We discuss and assess potential adaptive and non-adaptive explanations for this variation. © FEMS 2016. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  11. [Effects of illumination and seed-soaking reagent on seed germination of Solanum nigrum].

    Science.gov (United States)

    Yang, Chuan-Jie; Wei, Shu-He; Zhou, Qi-Xing; Hu, Ya-Hu; Niu, Rong-Cheng

    2009-05-01

    To explore a rapid seed germination method for hyperaccumulator Solanum nigrum, a germination experiment with different illumination and seed-soaking treatments was conducted in constant temperature box and greenhouse, with filter as burgeon base. Under illumination, the germination rate was about 5 times high of that without illumination (P seed germination of S. nigrum. All test seed-soaking reagents could significantly improve the germination rate of S. nigrum (P seeds treated with H2O2 had the shortest germination time. The germination rate of seeds soaked but without cleaning was 2-3 times as high as that of seeds soaked and cleaned with water.

  12. Genome-wide association study of salt tolerance at the seed germination stage in rice.

    Science.gov (United States)

    Shi, Yingyao; Gao, Lingling; Wu, Zhichao; Zhang, Xiaojing; Wang, Mingming; Zhang, Congshun; Zhang, Fan; Zhou, Yongli; Li, Zhikang

    2017-05-30

    Improving the salt tolerance of direct-seeding rice at the seed germination stage is a major breeding goal in many Asian rice-growing countries, where seedlings must often establish in soils with a high salt content. Thus, it is important to understand the genetic mechanisms of salt tolerance in rice and to screen for germplasm with salt tolerance at the seed germination stage. Here, we investigated seven seed germination-related traits under control and salt-stress conditions and conducted a genome-wide association study based on the re-sequencing of 478 diverse rice accessions. The analysis used a mixed linear model and was based on 6,361,920 single nucleotide polymorphisms in 478 rice accessions grouped into whole, indica, and non-indica panels. Eleven loci containing 22 significant salt tolerance-associated single nucleotide polymorphisms were identified based on the stress-susceptibility indices (SSIs) of vigor index (VI) and mean germination time (MGT). From the SSI of VI, six major loci were identified, explaining 20.2% of the phenotypic variation. From the SSI of MGT, five major loci were detected, explaining 26.4% of the phenotypic variation. Of these, seven loci on chromosomes 1, 5, 6, 11, and 12 were close to six previously identified quantitative gene loci/genes related to tolerance to salinity or other abiotic stresses. The strongest association region for the SSI of MGT was identified in a ~ 13.3 kb interval (15450039-15,463,330) on chromosome 1, near salt-tolerance quantitative trait loci controlling the Na + : K + ratio, total Na + uptake, and total K + concentration. The strongest association region for the SSI of VI was detected in a ~ 164.2 kb interval (526662-690,854) on chromosome 2 harboring two nitrate transporter family genes (OsNRT2.1 and OsNRT2.2), which affect gene expression under salt stress. The haplotype analysis indicated that OsNRT2.2 was associated with subpopulation differentiation and its minor/rare tolerant haplotype was

  13. Bacterial proteins pinpoint a single eukaryotic root

    Czech Academy of Sciences Publication Activity Database

    Derelle, R.; Torruella, G.; Klimeš, V.; Brinkmann, H.; Kim, E.; Vlček, Čestmír; Lang, B.F.; Eliáš, M.

    2015-01-01

    Roč. 112, č. 7 (2015), E693-E699 ISSN 0027-8424 R&D Projects: GA ČR GA13-24983S Grant - others:GA MŠk(CZ) ED2.1.00/03.0100; Howard Hughes Medical Institute International Early Career Scientist Program(US) 55007424; Spanish Ministry of Economy and Competitiveness, European Molecular Biology Organization Young Investigator Program(ES) BFU2012-31329; Spanish Ministry of Economy and Competitiveness, "Centro de Excelencia Severo Ochoa" - European Regional Development Fund(ES) Sev-2012-0208, BES-2013-064004 Institutional support: RVO:68378050 Keywords : eukaryote phylogeny * phylogenomics * Opimoda * Diphoda * LECA Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 9.423, year: 2015

  14. [Bacillus isolates from rhizosphere of cacti improve germination and bloom in Mammillaria spp. (Cactaceae)].

    Science.gov (United States)

    Chávez-Ambriz, Lluvia A; Hernández-Morales, Alejandro; Cabrera-Luna, José A; Luna-Martínez, Laura; Pacheco-Aguilar, Juan R

    Cacti are the most representative vegetation of arid zones in Mexico where rainfall is scarce, evapotranspiration is high and soil fertility is low. Plants have developed physiological strategies such as the association with microorganisms in the rhizosphere zone to increase nutrient uptake. In the present work, four bacterial isolates from the rhizosphere of Mammillaria magnimamma and Coryphantha radians were obtained and named as QAP3, QAP19, QAP22 and QAP24, and were genetically identified as belonging to the genus Bacillus, exhibiting in vitro biochemical properties such as phosphate solubilization, indoleacetic acid production and ACC deaminase activity related to plant growth promotion, which was tested by inoculating M. magnimamma seeds. It was found that all isolates increased germination from 17 to 34.3% with respect to the uninoculated control seeds, being QAP24 the one having the greatest effect, accomplishing the germination of viable seeds (84.7%) three days before the control seeds. Subsequently, the inoculation of Mammillari zeilmanniana plants with this isolate showed a positive effect on bloom, registering during two months from a one year period, an increase of up to 31.0% in the number of flowering plants compared to control plants. The characterized Bacillus spp. isolates have potential to be used in conservation programs of plant species from arid zones. Copyright © 2016 Asociación Argentina de Microbiología. Publicado por Elsevier España, S.L.U. All rights reserved.

  15. Growth promotion of peanut (Arachis hypogaea L.) and maize (Zea mays L.) plants by single and mixed cultures of efficient phosphate solubilizing bacteria that are tolerant to abiotic stress and pesticides.

    Science.gov (United States)

    Anzuay, María Soledad; Ciancio, María Gabriela Ruiz; Ludueña, Liliana Mercedes; Angelini, Jorge Guillermo; Barros, Germán; Pastor, Nicolás; Taurian, Tania

    2017-06-01

    The aims of this study were, to analyze in vitro phosphate solubilization activity of six native peanut bacteria and to determine the effect of single and mixed inoculation of these bacteria on peanut and maize plants. Ability to produce organic acids and cofactor PQQ, to solubilize FePO 4 and AlPO 4 and phosphatase activity were analyzed. Also, the ability to solubilize phosphate under abiotic stress and in the presence of pesticides of the selected bacteria was determined. The effect of single and mixed bacterial inocula was analyzed on seed germination, maize plant growth and in a crop rotation plant assay with peanut and maize. The six strains produced gluconic acid and five released cofactor PQQ into the medium. All bacteria showed ability to solubilize phosphate from FePO 4 and AlPO 4 and phosphatase activity. The ability of the bacteria to solubilize tricalcium phosphate under abiotic stress and in presence of pesticides indicated encouraging results. Bacterial inoculation on peanut and maize increased seed germination, plant́s growth and P content. Phosphate solubilizing bacteria used in this study showed efficient phosphate mineralizing and solubilization ability and would be potential P-biofertilizers for peanut and maize. Copyright © 2017 Elsevier GmbH. All rights reserved.

  16. Constant and alternating temperature effects on germination and early growth of scorzonera

    OpenAIRE

    Dias, A.S.; Dias, L.S.; Pereira, I.P.

    2013-01-01

    Scorzonera is a threatened species in Portugal. Given the role of temperature in germination and seedling recruitment, the performance of total germination, lag of germination, duration of germination, shape of germination, root and hypocotyl length, and relative root growth of scorzonera was investigated under constant and alternating temperatures between 10 and 25ºC. Because of scorzonera’s rarity and threatened status, seeds of cultivated scorzonera were used, providing the framework for h...

  17. Variation of germination of eggplant (Solanum melongena L.) seed during storage life

    OpenAIRE

    Ristić, Nevena; Todorović, Vesna; Adžić, Slađan; Zdravković, Jasmina

    2013-01-01

    Eggplant (Solanum melongena L.) seed is dormant, which means that the maximum germination is achieved after some time. The research was performed on one genotype (Domaci srednje dugi - DSD). The seed, studied for germination rate, originates from year 2007 and the germination variation was studied for period 2007 - 2011. Eggplant seed was dormant after yield in 2007, but the germination increased over the years. The trial was conducted at the standard germination test method, defined in the R...

  18. pre-germination treatments in castor seeds, cultivar IAC 226

    International Nuclear Information System (INIS)

    Costa Nobre, Danubia Aparecida; Gomes Damascena, Joyce; Marcia, Andreia; Santos de Souza, David; Pereira dos Santos, Marlucia; Rodrigues Pereira, Adriana; Goncalves Pereira, Cassio

    2013-01-01

    The present study aimed to evaluate the efficiency of different pre-germination treatments in castor beans, IAC 226. The experimental design was completely randomized in a factorial 4 x 4 (four temperatures and four immersion times), with four replications. Pre-germination treatments were: immersion in water at room temperature (25 Celsius degrade) and immersion in hot water at temperatures of 60, 70 and 80 Celsius degrade for 2, 4, 6 and 8 minutes. Water content of the seeds was determined before treatments. Before and after each treatment, seeds were subjected to germination test; 20-30 Celsius degrade alternating temperature, determining the percentages of normal and abnormal seedlings, dormant and dead seeds. Independent of time, immersion in 70 Celsius degrade, water was the most efficient treatment for accelerating germination of castor bean cultivar IAC 226.

  19. Germination and in vitro multiplication of Helianthemum kahiricum, a ...

    African Journals Online (AJOL)

    aghomotsegin

    2015-03-25

    Mar 25, 2015 ... Seeds of Helianthemum kahiricum have an excellent germination rate ... of H. kahiricum on Murashige and Skoog medium (MS) free growth regulators ... The kinetin had a positive effect on the multiplication and growth, but a.

  20. Germination and In Vitro Regeneration Response of Local Nigerian ...

    African Journals Online (AJOL)

    Prof. Ogunji

    the highest germination percentage of 57.33% and percentage contamination of. 11.11% ... development of in vitro regeneration of the crop from various explant sources. The advent of ..... Effect of variety and plant growth regulators on callus.

  1. A germination test: an easy approach to know the irradiation

    International Nuclear Information System (INIS)

    Khawar, A.; Bhatti, I.A.; Bhatti, H.N.

    2010-01-01

    Food irradiation is an evolving preserving technique that provides a shield against the spoilage and might have a potential to ensure the food safety and security world wide. In the present study, feasibility to apply germination test to distinguish an un-irradiated and irradiated samples of wheat, maize, chickpea and black eye beans was checked. Samples were irradiated to the absorbed doses ranging from 0-10 kGy using Co-60 gamma irradiator and were germinated in plant growth chamber. Root and shoot lengths were measured at 7th day after gamma radiation treatment. In all the irradiated samples root and shoot lengths were decreased with the increase in radiation absorbed doses. The seeds irradiated to the absorbed doses more than 2 kGy were not germinated. Germination test proved as an easy and simple method to detect irradiation in wheat, maize, chickpea and black eye beans irradiated even at low absorbed doses. (author)

  2. Effects of salinity stress on water uptake, germination and early ...

    African Journals Online (AJOL)

    Administrator

    2011-09-07

    Sep 7, 2011 ... Department of Field Crops, Faculty of Agriculture, Namik Kemal University, 59100 Tekirdag, ..... stresses on germination in durum wheat (Triticum durum Desf.) .... transgenic perennial ryegrass (Lolium perenne L.) obtained by.

  3. In vitro pollen quantity, viability and germination tests in quince

    African Journals Online (AJOL)

    use

    2011-11-21

    Nov 21, 2011 ... rootstock pollens were collected in April from the unopened pink balloon-stage flowers on mature trees ..... their pollen characteristics to be used in cross breeding ... viability and germination levels for pistachio and terebinth in.

  4. In vitro pollen germination of five citrus species

    International Nuclear Information System (INIS)

    Khan, S.A.; Perveen, A.

    2014-01-01

    The aim of present study is In vitro germination of the pollen grains of five Citrus species belonging to the family Rutaceae viz., Citrus aurantium L. var., aurantium Hook.f., C. limon (L.) Brum. f., C. paradisii Macfad, C. reticulata Blanco and C. sinensis (L.) Osbeck. using hanging drop technique. The germination was checked up to 48 weeks, for the pollen stored at different temperatures like 4 degree C, -20 degree C, -30 degree C and -60 degree C. The study indicates that low temperature and low relative humidity is better than high temperature and humidity with respect to pollen germination capacity and viability. Freeze dryer (-60 degree C) seems to be the best method to maintain pollen viability of stored pollen grains for a long period of time. Among five species Citrus aurantium, C. limon and C. sinensis showed high percentage of germination as compared to C. reticulata and C. paradisii. (author)

  5. Effects of different NaCl Concentrations on germination and ...

    African Journals Online (AJOL)

    USER

    Salinity refers to the salt content of any given system. By nature, arid .... Effect of varying concentrations of NaCl on seed germination of Amaranthus hybridus in percentages. .... Osmotic differences could explain this phenomenon where by ...

  6. The effect of osmopriming on germination, seedling growth and ...

    African Journals Online (AJOL)

    Jane

    2011-10-24

    Oct 24, 2011 ... affecting the oxidative metabolism such as increasing superoxide dismutase ... the adverse effect of salinity by improving germination and seedling growth .... osmoregulation by the accumulation of proline. A positive effect of ...

  7. Germination, growth and nodulation of Trigonella foenum graecum ...

    African Journals Online (AJOL)

    STORAGESEVER

    2009-06-03

    Jun 3, 2009 ... In this work, we analyzed the effects of salinity on seed germination, growth and nodulation of fenugreek ..... metabolic activities in function, such as the accumulation .... stress: possible role of trehalose in osmoregulation. Lett.

  8. Desiccation effects on germination and vigor of King palm seeds

    Directory of Open Access Journals (Sweden)

    Martins Cibele C.

    2003-01-01

    Full Text Available The desiccation tolerance of Archontophoenix alexandrae (Wendl. & Drude seeds was determined and the most sensitive vigor test for assessing seed deterioration of this species was identified. Mature fruits were harvested in the palm collection of the Instituto Agronomico in Campinas, Brazil. Depulped fruits were transported in impermeable packages to the Faculdade de Agronomia in Botucatu, where the seeds were dried. As the seed moisture decreased, germination, seedling length, electrical conductivity and moisture were measured. The seeds of A. alexandrae are recalcitrant, with high germination percentage (over 67% when undried (47% seed moisture. Lowering seed moisture below 31.5% reduced the germination rate significantly (<52.5%. Total germination failure was observed when seed moisture reached 15.1%. The electrical conductivity was the most sensitive vigor test to identify seed deterioration.

  9. Germination of Chenopodium Album in Response to Microwave Plasma Treatment

    International Nuclear Information System (INIS)

    Sera, Bozena; Stranak, Vitezslav; Sery, Michal; Spatenka, Petr; Tichy, Milan

    2008-01-01

    The seeds of Lamb's Quarters (Chenopodium album agg.) were stimulated by low-pressure discharge. The tested seeds were exposed to plasma discharge for different time durations (from 6 minutes to 48 minutes). Germination tests were performed under specified laboratory conditions during seven days in five identical and completely independent experiments. Significant differences between the control and plasma-treated seeds were observed. The treated seeds showed structural changes on the surface of the seat coat. They germinated faster and their sprout accretion on the first day of seed germination was longer. Germination rate for the untreated seeds was 15% while it increased approximately three times (max 55%) for seeds treated by plasma from 12 minutes to 48 minutes.

  10. inhibition of germination and growth behavior of some cowpea

    African Journals Online (AJOL)

    DR. AMIN

    2011-12-02

    Dec 2, 2011 ... COWPEA VARIETIES USING NEEM (AZADIRACTA INDICA) LEAF WATER. EXTRACTS ... Keywords: Neem, Allelopathic effect, Leaf extract, Germination, Growth behavior ... and lotion today, as well as biological insecticide.

  11. Germination Response of Gum Arabic (Acacia senegal L.) Seeds to ...

    African Journals Online (AJOL)

    ... Arabic (Acacia senegal L.) Seeds to Hot Water Pre-Treatment in Maiduguri, ... of Maiduguri under tree shade, to study the effect of hot water pre-treatment duration. ... Germination response, pre-sowing treatment, gum Arabic, orthodox seeds.

  12. Effects of animal's rumen juice on seed germination of Vicia ...

    African Journals Online (AJOL)

    DR TONUKARI NYEROVWO

    2011-08-22

    Aug 22, 2011 ... To help understand the effects of grazing on seed germination characteristics of Vicia angustifolia L., we conducted a ... feed forage seeds or reproduction organs selectively and changes the ... The mean daily air temperature ...

  13. Effects of Seed Size on Germination and Early Morphorlogical and ...

    African Journals Online (AJOL)

    Effects of Seed Size on Germination and Early Morphorlogical and Physiological Characteristics of Gmelina Arborea , Roxb. ... African Research Review ... They were grouped into 3 categories as large seed size (LSS), medium seed size ...

  14. The plasma membrane proteome of germinating barley embryos

    DEFF Research Database (Denmark)

    Hynek, Radovan; Svensson, Birte; Jensen, O.N.

    2009-01-01

    Cereal seed germination involves a complex coordination between different seed tissues. Plasma membranes must play crucial roles in coordination and execution of germination; however, very little is known about seed plasma membrane proteomes due to limited tissue amounts combined...... with amphiphilicity and low abundance of membrane proteins. A fraction enriched in plasma membranes was prepared from embryos dissected from 18 h germinated barley seeds using aqueous two-phase partitioning. Reversed-phase chromatography on C-4 resin performed in micro-spin columns with stepwise elution by 2-propanol...... was used to reduce soluble protein contamination and enrich for hydrophobic proteins. Sixty-one proteins in 14 SDS-PAGE bands were identified by LC-MS/MS and database searches. The identifications provide new insight into the plasma membrane functions in seed germination....

  15. Comparison of seed priming techniques with regards to germination ...

    African Journals Online (AJOL)

    Tuoyo Aghomotsegin

    2016-11-16

    Nov 16, 2016 ... investigate the effects of different priming techniques on seed germination and early seedling growth. The seeds ... methods in which the environment must be controlled for prolonged ..... Guanabara Koogan, Rio de Janeiro ...

  16. Ecophysiology of seed germination in Digitaria insularis ((L.) Fedde)

    OpenAIRE

    Mendonça,Giovana Soares de; Martins,Cibele Chalita; Martins,Dagoberto; Costa,Neumárcio Vilanova da

    2014-01-01

    The invasive behaviour of sourgrass (Digitaria insularis) in cultivated areas is due to its strategy of aggressive regeneration, which is based on seed germination. Knowledge of the physiological ecology of this species can contribute to the development of management and control strategies. The aim of this research was to understand the effects of provenance, temperature and light on the germination of sourgrass seeds collected in the Brazilian state of São Paulo in the cities of Americana, B...

  17. Memorandum on the effect of ozone on germinating seeds

    Energy Technology Data Exchange (ETDEWEB)

    Micheels, H; De Heen, P

    1906-01-01

    Two experiments are described the purpose of which was to ascertain the effect of ozone on germinating plants. In both experiments the plants which were not exposed to ozone had considerably longer roots and greater average weight. The number of germinations was not affected in one experiment, but was down 10% in the other. A final comment suggests that although the toxicity of ozone is well known, its use as a stimulant should not be ruled out. 2 figures.

  18. Seed and Germination Characteristics of 20 Amazonian Liana Species

    Directory of Open Access Journals (Sweden)

    Mareike Roeder

    2013-01-01

    Full Text Available Lianas are an important component of tropical forests, and may reach their highest densities in disturbed areas. However, information on seed and germination characteristics is scarce. Twenty Amazon liana species were screened for their germination characteristics, including light dependence, tolerance of desiccation and of alternating temperatures; these characteristics are considered important for the germination success in areas with relatively open canopies. Between 31–1,420 seeds per species were available, as 15 species seeds came from one mother plant. We studied seed biometry and conducted germination trials with fresh seeds (12 h light daily, or dark and desiccated seeds at 25 °C. Germination at alternating temperatures (20/30 °C, 15/35 °C was analyzed for nine species. Of the 20 species, eight species with the largest seeds had desiccation sensitive seeds; this is the first record for species of four genera and one family, where only desiccation tolerant seeds are otherwise recorded. Light-dependent germination was found in three species (0.01–0.015 g and is the first record for two; however, results were based on seeds from one plant per species. Alternating temperatures of 15/35 °C decreased final germination of four out of nine species, and response to 20/30 °C cycles varied compared to constant 25 °C. Seed and germination characteristics of the species ranged from pioneer to climax traits indicating that establishment of lianas from seeds may be confined to species specific niches.

  19. Effect of Estrogen and Progeterone on seed germination

    Directory of Open Access Journals (Sweden)

    Nirmala

    Full Text Available Early pregnancy detection in dairy cattle is an integral part of a successful animal husbandry practice. A simple seed germination technique (Punyakoti test comprises observation of differential seed germination response of wheat seeds to diluted fresh urine samples as reflected by significant inhibition of germination percentage in pregnant cow urine when compared to non pregnant cow urine. Hormone metabolites excreted through urine might affect the seed germination in pregnant cow urine. In the present study an attempt was made to test the effect of hormones (in their natural forms at different concentrations of estrogen (17-ß estradiol and progesterone on wheat and green gram germination. Stock solutions of estrogen and progesterone were prepared in alcohol (1mg/ml and serial dilutions made using distilled water to get the concentrations of T1=10, T2=1, T3=0.1 and T4=0.01 μg/ml respectively in treatment groups. About 15 seeds each of wheat and green gram were taken in sterile Petri dishes into which 15ml of each test preparation was poured. The treatments were compared with distilled water and alcohol controls. The study was conducted for a period of five days during which seed germination was observed after 48 hrs and shoot lengths were also measured by the end of study. The average seed germination and shoot length in treatment groups did not vary significantly (P>0.05 when compared with that of control groups. Thus from the present study, it can be concluded that estrogen and progesterone in their natural form will not affect seed germination and shoot length. [Veterinary World 2008; 1(8.000: 241-242

  20. Constant temperatures and the rate of seed germination in maize ...

    African Journals Online (AJOL)

    The rate of germination of the NEM cultivar was faster than that of the QPM cultivar at all temperatures. The thermal times for median germination were 46 for QPM and 40.7 oCd for the NEM cultivar. The cardinal temperatures (base, Tb, optimum, To and ceiling, Tc) for the NEM cultivar were Tb: 7, To: 30 and Tc: 48.2 oC.

  1. Mechanism of fluridone-induced seed germination of cistanche tubulosa

    International Nuclear Information System (INIS)

    Chen, Q.L.; Tu, P.

    2016-01-01

    Our previous study disclosed that fluridone, a synthesis inhibitor of abscisic acid (ABA), could stimulate seed germination in the holoparasitic plant Cistanche tubulosa . Nonetheless, the underlying mechanisms have not been thoroughly elucidated. In the present study, an attempt was made to reveal the mechanism of fluridone breaking seed dormancy in C. tubulosa and to determine the contribution of hormones in this process. The ABA level in seeds initially decreased following fluridone treatment and was subsequently maintained at a concentration of 31 ng g/sup -1/ DW (dry weight) three days later. The contents of gibberellins (GAs) initially in creased and subsequently were maintained at a level of 40 ng g-1 DW after ten days. However, the increment of seed germination induced by fluridone was inhibited after the introduction of exogenous ABA or paclobutrazol (a synthesis inhibitor of GAs). Furthermore, inhibition from paclobutrazol was reversed by an additional treatment with exogenous GA3. When the ratio of endogenous GAs to ABA reached 4:3, C. tubulosa seeds initiated germination. By contrast, although the ratio of endogenous GAs to ABA content reached 2:1 by cold stratification, C. tubulosa seeds could not germinate unless exogenous GA3 was added. In summary, our current study revealed that (i) GAs and ABA play key roles for the seed germination of C. tubulosa , (ii) fluridone inhibited ABA biosynthesis but increased the concentration of GAs in seeds, and (iii) fluridone might initiate other processes associated with germination. (author)

  2. Temperature Effects on Cuscuta campestris Yunk. Seed Germination

    Directory of Open Access Journals (Sweden)

    Marija Sarić-Krsmanović

    2013-01-01

    Full Text Available Studies of biological characteristics of seeds and conditions for their germination havea major importance for planning and executing rational measures of weed control. Theaim of this study was to investigate the effect of different temperatures on germinationof C. campestris seeds. Three treatments (T1- storage at room temperature; T2 – exposureto 4°C for 30 days; T3 – scarification by concentrated sulphuric acid differing in manipulationwith seeds before germination were tested at different temperatures (5°C, 10°C, 15°C,20°C, 25°C, 30°C, 35°C, 40°C, 45°C. Germinated seeds were counted daily for ten days andthe length of seedlings was measured on the last day. The results showed that differencesin germination of C. campestris seeds were very prominent between temperatures, as wellas between treatments T1, T2 and T3. Seeds failed to germinate at 5°C and 45°C in all treatments(T1, T2, T3. Germination ranged from 6.25 at 10°C to 96.88%, the highest percentage,achieved at 30°C.

  3. TIME REDUCTION FOR SURINAM GRASS SEED GERMINATION TEST

    Directory of Open Access Journals (Sweden)

    Camila de Aquino Tomaz

    2015-10-01

    Full Text Available ABSTRACTThe period for the germination test of Surinam grass seeds established by the Rules for Seeds Testing is 28 days, considered too lengthy by producers, venders, and seed analysis laboratories. So, the objective of this research was to evaluate the possibility of reducing the time for the germination test of Surinam grass seeds and to establish a method for dormancy breaking and the ideal temperature. Ten seed lots were submitted to the following treatments to overcome seed dormancy: control; substrate moistening with 0.2% KNO3; and scarification with sulfuric acid (98% 36 N for 15 minutes. After the treatments, the lots were submitted to seed water content, germination and tetrazolium tests. During the germination test, conducted with four replicates of 100 seeds per treatment for 28 days, two conditions of alternating temperatures (20-35 °C and 15-35 °C with 8 hours of light were tested. Attempting to determine the test end date, daily counts of the number of normal seedlings were made and for each lot, treatment, and temperature, a growth curve for the evaluation of germination was adjusted. The segmented regression model parameter estimations were calculated for each treatment. The germination test of Braquiaria decumbensseeds may be evaluated in 12 days after sowing using alternating temperatures of 20-35 °C and without any treatment to overcome dormancy.

  4. Omethoate treatment mitigates high salt stress inhibited maize seed germination.

    Science.gov (United States)

    Yang, Kejun; Zhang, Yifei; Zhu, Lianhua; Li, Zuotong; Deng, Benliang

    2018-01-01

    Omethoate (OM) is a highly toxic organophophate insecticide, which is resistant to biodegradation in the environment and is widely used for pest control in agriculture. The effect of OM on maize seed germination was evaluated under salt stress. Salt (800mM) greatly reduced germination of maize seed and this could be reversed by OM. Additionally, H 2 O 2 treatment further improved the effect of OM on seed germination. Higher H 2 O 2 content was measured in OM treated seed compared to those with salt stress alone. Dimethylthiourea (DTMU), a specific scavenger of reactive oxygen species (ROS), inhibited the effect of OM on seed germination, as did IMZ (imidazole), an inhibitor of NADPH oxidase. Abscisic acid (ABA) inhibited the effect of OM on seed germination, whereas fluridone, a specific inhibitor of ABA biosynthesis, enhanced the effect of OM. Taken together, these findings suggest a role of ROS and ABA in the promotion of maize seed germination by OM under salt stress. Copyright © 2017 Elsevier Inc. All rights reserved.

  5. Effect of germination and thermal treatments on folates in rye.

    Science.gov (United States)

    Kariluoto, Susanna; Liukkonen, Kirsi-Helena; Myllymäki, Olavi; Vahteristo, Liisa; Kaukovirta-Norja, Anu; Piironen, Vieno

    2006-12-13

    Effects of germination conditions and thermal processes on folate contents of rye were investigated. Total folate contents were determined microbiologically with Lactobacillus rhamnosus (ATCC 7469) as the growth indicator organism, and individual folates were determined by high-performance liquid chromatography after affinity chromatographic purification. Germination increased the folate content by 1.7-3.8-fold, depending on germination temperature, with a maximum content of 250 micro g/100 g dry matter. Hypocotylar roots with their notably high folate concentrations (600-1180 micro g/100 g dry matter) contributed 30-50% of the folate contents of germinated grains. Germination altered the proportions of folates, increasing the proportion of 5-methyltetrahydrofolate and decreasing the proportion of formylated folate compounds. Thermal treatments (extrusion, autoclaving and puffing, and IR and toasting) resulted in significant folate losses. However, folate levels in grains that were germinated and then were heat processed were higher than for native (nongerminated) grains. Opportunities to optimize rye processing to enhance folate levels in rye-based foods are discussed.

  6. The biological role of exogenic factors in broomrape germination

    International Nuclear Information System (INIS)

    Zhelev, N.

    1987-01-01

    The often observed contradictory effect of the substances stimulating broomrape seed germination were assessed and explained. Low and optimal concentrations of these substances had a stimulating effect, while the high concentrations produced an inhibiting effect. For chemically pure mustard oil, phenylisothiocianate and allylisothiocianate such concentrations are 10 -4 to 10 -3 and more. The effectiveness of substances stimulating germination is conditioned in many cases by their watersoluble or gaseous state. The latter state of the stimulating substances is more natural, more economic and more efficient for the fumigation (in low concentrations) of the soil layer penetrated by the roots where parasitic seeds are present. A considerable number of agricultural crops, releasing by their roots essential oils containing glucosides, the hydrolysis of which results in elimination of volatile products of mustard oil type, represent natural stimulators for the germination of broomrape seeds. The effect of gamma-ray irradiation of parasitic seeds depends on their state. Dry seeds endure 80-120 krad, while moist ones - only 40-80 krad. Broomrape (O. ramosa and O. mutella) seeds begin their germination at 10 grad C. The optimal temperature for germination is 18-30 grad C, while 35-40 grad C irreversively discontinues the germination

  7. DELAY OF GERMINATION 1 mediates a conserved coat-dormancy mechanism for the temperature- and gibberellin-dependent control of seed germination

    OpenAIRE

    Graeber, K.; Linkies, A.; Steinbrecher, T.; Tarkowská, D. (Danuše); Turečková, V. (Veronika); Ignatz, M.; Voegele, A.; Urbanová, T. (Terezie); Strnad, M. (Miroslav); Leubner-Metzger, G. (Gerhard)

    2014-01-01

    Seed germination is an important life-cycle transition because it determines subsequent plant survival and reproductive success. To detect optimal spatiotemporal conditions for germination, seeds act as sophisticated environmental sensors integrating information such as ambient temperature. Here we show that the DELAY OF GERMINATION 1 (DOG1) gene, known for providing dormancy adaptation to distinct environments, determines the optimal temperature for seed germination. By reciprocal gene-swapp...

  8. La organización germinal

    Directory of Open Access Journals (Sweden)

    Xavier Soca Filella

    2013-08-01

    Full Text Available Las vicisitudes de estos últimos años en las economías occidentales, y sobre todo en las del arco mediterráneo, han sumido las empresas en un profundo callejón sin salida, dónde tras efectuar reducciones drásticas en sus estructuras ahora ven mermadas sus posibilidades de crecimiento. Surge el interrogante de qué tipo de crecimiento perseguimos y qué organización precisamos para conseguirlo. Vislumbramos a partir de lo acaecido en los últimos dos lustros que las organizaciones preferirán moverse dentro de unos patrones de crecimientos sostenibles, en lugar de las alocadas carreras de inicios de siglo. Este crecimiento sostenible comportará decidir que formas de organización permitirán gestionar mejor este crecimiento. Dentro del abanico de las posibilidades, planteo un tipo de organización en constante cambio que facilite la adaptación a los diversos tipos de mercados que puedan ir surgiendo en el futuro: LA ORGANIZACIÓN GERMINAL.

  9. Germinal and somatic mutations in cancer

    International Nuclear Information System (INIS)

    Knudson, A.G. Jr.

    1977-01-01

    The role of germinal and somatic mutations in carcinogenesis leads to the conclusion that environmental carcinogens probably exert their effects via somatic mutations. Susceptibility to this process may itself be genetically determined, so we may deduce that two groups, one genetic and one non-genetic, are included in the 'environmental' class. Other individuals seem to acquire cancer even in the absence of such environmental agents, and these too may be classified into a genetic and a non-genetic group. It has been estimated that in industrial countries, the environmental groups include 70-80% of all cancer cases, but we are only beginning to know how to separate the genetic and non-genetic subgroups. The genetic subgroup of the 'non-environmental' group is very small, probably of the order of magnitude of 1-2% for cancer as a whole. The remainder, about 25%, comprises a non-genetic, non-environmental subgroup that seems to arise as a consequence of 'spontaneous' somatic mutations. The incidence of these 'background' cancers is what we should combat with preventive and therapeutic measures

  10. Aminopeptidase Activity from Germinated Jojoba Cotyledons 1

    Science.gov (United States)

    Johnson, Russell; Storey, Richard

    1985-01-01

    One major and two minor aminopeptidase activities from germinated jojoba (Simmondsia chinensis) cotyledon extracts were separated by ammonium sulfate precipitation and chromatofocusing. None of the activities were inhibited by 1,10 phenanthroline. The major aminopeptidase, purified 260-fold, showed a pH optimum of 6.9 with leucine-p-nitroanilide as substrate, a molecular weight estimated at 14,200 by electrophoretic analysis, and an isoelectric point of 4.5 according to the chromatofocusing pattern. Activity was inhibited by p-chloromercuribenzoate, slightly stimulated by 1,10 phenanthroline and 2-mercaptoethanol, and not influenced by Mg2+ or diethyl pyrocarbonate. Inhibition by p-chloromercuribenzoate was prevented by the presence of cysteine in the assay. Leucine-p-nitroanilide and leucine-β-naphthylamide were the most rapidly hydrolyzed of 11 carboxy-terminal end blocked synthetic substrates tested. No activity on endopeptidase or carboxypeptidase specific substrates was detected. The major aminopeptidase showed activity on a saline soluble, jojoba seed protein preparation and we suggest a possible physiological role for the enzyme in the concerted degradation of globulin reserve proteins during cotyledon senescence. PMID:16664465

  11. Aminopeptidase activity from germinated jojoba cotyledons.

    Science.gov (United States)

    Johnson, R; Storey, R

    1985-11-01

    One major and two minor aminopeptidase activities from germinated jojoba (Simmondsia chinensis) cotyledon extracts were separated by ammonium sulfate precipitation and chromatofocusing. None of the activities were inhibited by 1,10 phenanthroline.The major aminopeptidase, purified 260-fold, showed a pH optimum of 6.9 with leucine-p-nitroanilide as substrate, a molecular weight estimated at 14,200 by electrophoretic analysis, and an isoelectric point of 4.5 according to the chromatofocusing pattern. Activity was inhibited by p-chloromercuribenzoate, slightly stimulated by 1,10 phenanthroline and 2-mercaptoethanol, and not influenced by Mg(2+) or diethyl pyrocarbonate. Inhibition by p-chloromercuribenzoate was prevented by the presence of cysteine in the assay. Leucine-p-nitroanilide and leucine-beta-naphthylamide were the most rapidly hydrolyzed of 11 carboxy-terminal end blocked synthetic substrates tested. No activity on endopeptidase or carboxypeptidase specific substrates was detected. The major aminopeptidase showed activity on a saline soluble, jojoba seed protein preparation and we suggest a possible physiological role for the enzyme in the concerted degradation of globulin reserve proteins during cotyledon senescence.

  12. Profiling Gene Expression in Germinating Brassica Roots.

    Science.gov (United States)

    Park, Myoung Ryoul; Wang, Yi-Hong; Hasenstein, Karl H

    2014-01-01

    Based on previously developed solid-phase gene extraction (SPGE) we examined the mRNA profile in primary roots of Brassica rapa seedlings for highly expressed genes like ACT7 (actin7), TUB (tubulin1), UBQ (ubiquitin), and low expressed GLK (glucokinase) during the first day post-germination. The assessment was based on the mRNA load of the SPGE probe of about 2.1 ng. The number of copies of the investigated genes changed spatially along the length of primary roots. The expression level of all genes differed significantly at each sample position. Among the examined genes ACT7 expression was most even along the root. UBQ was highest at the tip and root-shoot junction (RS). TUB and GLK showed a basipetal gradient. The temporal expression of UBQ was highest in the MZ 9 h after primary root emergence and higher than at any other sample position. Expressions of GLK in EZ and RS increased gradually over time. SPGE extraction is the result of oligo-dT and oligo-dA hybridization and the results illustrate that SPGE can be used for gene expression profiling at high spatial and temporal resolution. SPGE needles can be used within two weeks when stored at 4 °C. Our data indicate that gene expression studies that are based on the entire root miss important differences in gene expression that SPGE is able to resolve for example growth adjustments during gravitropism.

  13. Environmental Factors that Interfere in the Germination

    Directory of Open Access Journals (Sweden)

    Lisiane de Souza

    2014-12-01

    Full Text Available This paper refers to the application of experiments with sixth graders of elementary school, aiming motivation, skills development focused on observation, interpersonal relationships in teams, related to the various forms of language skills, as well to identify and resume misconceptions about the external (environmental factors required for seed germination, in order that the contents developed this year refer to the study of the earth, soil, water and air, among others, and that many students do not understand all the concepts and the importance of these factors for the existence of living beings. The experiments were organized in two stages, first to observe the influence of soil and another moment to observe the interference of water, air and light. The temperature impractical activities were conducted, however, during the observation period (three weeks experiments remained in a controlled environment in the science laboratory. For the experiments we used materials easily found in commerce, some recycled; students were organized into six teams, which improved the data collection, the maintenance of the experiments, the calculations of the percentages, and the producing of report. Many of these contents had not yet been studied in other disciplines, but were developed in the discipline of science, respecting prior knowledge and cognitive abilities. The use of experiments was effective for the construction of new knowledge and to develop skills necessary to start the search.

  14. Proteomic analysis of lettuce seed germination and thermoinhibition by sampling of individual seeds at germination and removal of storage proteins by polyethylene glycol fractionation

    DEFF Research Database (Denmark)

    Wang, Wei-Qing; Song, Bin-Yan; Deng, Zhi-Jun

    2015-01-01

    the sensitivity of germination to abscisic acid. MVA pathway-derived products, cytokinins, partially reversed the lovastatin inhibition of germination and released seed thermoinhibition at 25°C. We conclude that the MVA pathway for isoprenoid biosynthesis is involved in lettuce seed germination...

  15. Association analysis of salt tolerance in cowpea (Vigna unguiculata (L.) Walp) at germination and seedling stages.

    Science.gov (United States)

    Ravelombola, Waltram; Shi, Ainong; Weng, Yuejin; Mou, Beiquan; Motes, Dennis; Clark, John; Chen, Pengyin; Srivastava, Vibha; Qin, Jun; Dong, Lingdi; Yang, Wei; Bhattarai, Gehendra; Sugihara, Yuichi

    2018-01-01

    This is the first report on association analysis of salt tolerance and identification of SNP markers associated with salt tolerance in cowpea. Cowpea (Vigna unguiculata (L.) Walp) is one of the most important cultivated legumes in Africa. The worldwide annual production in cowpea dry seed is 5.4 million metric tons. However, cowpea is unfavorably affected by salinity stress at germination and seedling stages, which is exacerbated by the effects of climate change. The lack of knowledge on the genetic underlying salt tolerance in cowpea limits the establishment of a breeding strategy for developing salt-tolerant cowpea cultivars. The objectives of this study were to conduct association mapping for salt tolerance at germination and seedling stages and to identify SNP markers associated with salt tolerance in cowpea. We analyzed the salt tolerance index of 116 and 155 cowpea accessions at germination and seedling stages, respectively. A total of 1049 SNPs postulated from genotyping-by-sequencing were used for association analysis. Population structure was inferred using Structure 2.3.4; K optimal was determined using Structure Harvester. TASSEL 5, GAPIT, and FarmCPU involving three models such as single marker regression, general linear model, and mixed linear model were used for the association study. Substantial variation in salt tolerance index for germination rate, plant height reduction, fresh and dry shoot biomass reduction, foliar leaf injury, and inhibition of the first trifoliate leaf was observed. The cowpea accessions were structured into two subpopulations. Three SNPs, Scaffold87490_622, Scaffold87490_630, and C35017374_128 were highly associated with salt tolerance at germination stage. Seven SNPs, Scaffold93827_270, Scaffold68489_600, Scaffold87490_633, Scaffold87490_640, Scaffold82042_3387, C35069468_1916, and Scaffold93942_1089 were found to be associated with salt tolerance at seedling stage. The SNP markers were consistent across the three models and

  16. Temperature in the seeds germination of pitaya genotypes

    Directory of Open Access Journals (Sweden)

    Alessandro Borini Lone

    2014-09-01

    Full Text Available The optimum temperature for germination of cacti vary with the species. With this work, we aimed to evaluate the seeds germination of pitaya genotypes under different temperatures. The used genotypes were: Hylocereus undatus (PB, H. polyrhizus (PV, Selenicereus megalanthus (PA, H. undatus x H. costaricensis (PH1 and H. costaricensis x H. undatus (PH2. For each genotype we used four replicates of 50 seeds, in a completely randomized design. The sowing was carried out on blotter paper in boxes type Gerbox ®, maintained at temperatures of 15, 20, 25, 30 and 35 oC constant and 15-25, 20-30 and 25-35 oC alternating with photoperiod 12 hours. The test lasted 30 days which were appraised the germination percentage, the germination speed index and the average time of germination. For seeds germination of PB, the result obtained in the temperature of 25 oC didn’t differ of the obtained to 30 and 20-30 oC, however it was superior to the others temperatures. In PV, the result at 25 oC didn’t differ of the obtained to 20 and 30 oC, being superior to the results of the others temperatures. For PA, the best result was obtained to 25 oC. In PH1, the temperatures of 25, 30 and 20-30 oC presented superiors results to the others. For PH2, the result obtained in 15-25oC didn’t differ of the obtained at 25 oC, however it was superior to the others temperatures. The constants temperatures of 25 and 30 °C and alternating 20-30 °C are suitable for germination of H. undatus and for the hybrid H. undatus x H. costaricensis. For H. polyrhizus, constant temperatures of 20, 25 to 30 °C are suitable for seed germination. The constant temperature of 25 °C is the most suitable for the germination of S. megalanthus. For the hybrid H. costaricensis x H. undatus, constant temperature of 25 °C and alternating 15-25°C are suitable for seed germination.

  17. The Germination of Some Species Tropical Legume Seeds

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    Eko Poetri

    2005-09-01

    Full Text Available A study to evaluate the seed germination of Leucaena pallida under climatic and soil conditions in Palu was conducted in village of Taipa, Sub district of North Palu, District of Palu. To compare with other species of legume trees however, this study involved Leucaena leucocephala cv Tarramba, Leucaena leucocephala cv Gumph and Gliricidia maculata. This experiment used completely randomized design with species of tropical tree legumes as treatment.  Each treatment was replicated five times.  Each experimental unit consisted of one tray (size 12.5 x 25 cm and planted by 20 seed.  Each tray was filled with soil while the seeds were planted one cm deep.  All seeds were immersed in warm water (600C for five minutes before planted.  The base of the trays were drilled to create some holes for water to drain out.  The trays were sprayed twice daily (07.00 am and 03.00 pm to keep the soil to be moist using a very smooth sprayer.  The variables recorded included the initiation time of germination, the range time of germination and the percentage of seed germination.  The data obtained were analyses using the Minitab 11. Least significance difference was used to test for possible differences between treatment means. The result revealed that initiation time of germination and the range of germination were not varied (P>0.05 among the seeds tested. The initiation time of germination ranged between 9 to 12 d after sowing.  Gliricidia maculata seed has the shortest period to germinate (12-16 d after sowing, meanwhile Leucaena leucocephala cv. Tarramba appear to be the longest (9-17 d after sowing. The highest seed viability was 60% in Leucaena leucocephala, cv Gump while the lowest was found in Gliricidia maculata (29%. In addition, both Leucaena pallida and Leucaena leucocephala cv Tarramba had medium seed germination (40% and 53% respectively. (Animal Production 7(3: 156-160 (2005Key Words: Seed, Germination, Tropical Leguminous

  18. Germination and growth of purple passion fruit seedlings under pre-germination treatments and mycorrhizal inoculation

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    Joaquín Guillermo Ramírez Gil

    2015-09-01

    Full Text Available The cultivation of purple passion fruit plants has increased in Colombia, as a direct result of its well-accepted consumption. Therefore, there is a need for technological solutions aimed at the sustainable growth of its fruit, such as improving seed germination and decreasing phosphorus (P deficiencies, given its low availability in tropical soils. This study aimed to evaluate pre-germination treatments (control, apical and basal seed cuts, alternation of temperature, photoperiod, application of gibberellic acid and immersion in 96 % of H2SO4 and mycorrhizal dependency of purple passion fruit plants, using three levels of P in the soil solution (0.002 mg L-1, 0.02 mg L-1 and 0.2 mg L-1, in 35 combinations with or without the inoculation of the Glomus fasciculatum mycorrhizal fungus. A completely randomized design with five replications per treatment was used. The treatment with the most significant effect for reducing the dormancy of the purple passion fruit seeds is the immersion in 96 % of H2SO4 for 20 minutes. This species shows a high mycorrhizal dependency, when coupled with 0.02 mg L-1 of P in the soil solution.

  19. [Study on influence factors of seed germination and seeding growth of Lonicera macranthoides].

    Science.gov (United States)

    Xu, Jin; Zhang, Ying; Cui, Guang-Lin; She, Yue-Hui; Li, Long-Yun

    2016-01-01

    In order to improve reproductive efficiency and quality standard, the influence factors of seed germination and seeding growth of Lonicera macranthoides werew studied. The fruit and seed morphological characteristics of L. macranthoides were observed, the seed water absorbing capacity was determined, and different wet sand stratification time, temperature and germination bed treatment were set up. The effects of the parameters on seed germination and seedling growth were analysed. There was no obstacles of water absorption on L. macranthoides seed, quantity for 22 h water absorption was close to saturation. In the first 80 d, with the increase of the stratification time, seed initial germination time was shortened, germination rate and germination potential was improved. Stratification for 100 d, germination rate decreased. At 15 ℃, seed germination and seedling growth indicators were the best. The seedling cotyledon width in light was significantly higher than that in dark. Seeds on the top of paper and top of sand germination rate, germination potential, and germination index was significantly higher than that of other germination bed and mildew rate is low. The optimal conditions of seeds germination test was stratified in 4 ℃ wet sand for 80 d, 15 ℃ illuminate culture on the top of paper or top of sand. The first seeding counting time was the 4th day after beginning the test, the final time was the 23th day. The germination potential statistical time was the 13th day after beginning the test. Copyright© by the Chinese Pharmaceutical Association.

  20. Different modes of hydrogen peroxide action during seed germination

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    Łukasz eWojtyla

    2016-02-01

    Full Text Available Hydrogen peroxide was initially recognized as a toxic molecule that causes damage at different levels of cell organization and thus losses in cell viability. From the 1990s, the role of hydrogen peroxide as a signaling molecule in plants has also been discussed. The beneficial role of H2O2 as a central hub integrating signaling network in response to biotic and abiotic stress and during developmental processes is now well established. Seed germination is the most pivotal phase of the plant life cycle, affecting plant growth and productivity. The function of hydrogen peroxide in seed germination and seed aging has been illustrated in numerous studies; however, the exact role of this molecule remains unknown. This review evaluates evidence that shows that H2O2 functions as a signaling molecule in seed physiology in accordance with the known biology and biochemistry of H2O2. The importance of crosstalk between hydrogen peroxide and a number of signaling molecules, including plant phytohormones such as abscisic acid, gibberellins and ethylene and reactive molecules such as nitric oxide and hydrogen sulfide acting on cell communication and signaling during seed germination, is highlighted. The current study also focuses on the detrimental effects of H2O2 on seed biology, i.e., seed aging that leads to a loss of germination efficiency. The dual nature of hydrogen peroxide as a toxic molecule on one hand and as a signal molecule on the other is made possible through the precise spatial and temporal control of its production and degradation. Levels of hydrogen peroxide in germinating seeds and young seedlings can be modulated via pre-sowing seed priming/conditioning. This rather simple method is shown to be a valuable tool for improving seed quality and for enhancing seed stress tolerance during post-priming germination. In this review, we outline how seed priming/conditioning affects the integrative role of hydrogen peroxide in seed germination and

  1. Systems biology and genome-wide approaches to unveil the molecular players involved in the pre-germinative metabolism: implications on seed technology traits.

    Science.gov (United States)

    Macovei, Anca; Pagano, Andrea; Leonetti, Paola; Carbonera, Daniela; Balestrazzi, Alma; Araújo, Susana S

    2017-05-01

    The pre-germinative metabolism is among the most fascinating aspects of seed biology. The early seed germination phase, or pre-germination, is characterized by rapid water uptake (imbibition), which directs a series of dynamic biochemical events. Among those are enzyme activation, DNA damage and repair, and use of reserve storage compounds, such as lipids, carbohydrates and proteins. Industrial seedling production and intensive agricultural production systems require seed stocks with high rate of synchronized germination and low dormancy. Consequently, seed dormancy, a quantitative trait related to the activation of the pre-germinative metabolism, is probably the most studied seed trait in model species and crops. Single omics, systems biology, QTLs and GWAS mapping approaches have unveiled a list of molecules and regulatory mechanisms acting at transcriptional, post-transcriptional and post-translational levels. Most of the identified candidate genes encode for regulatory proteins targeting ROS, phytohormone and primary metabolisms, corroborating the data obtained from simple molecular biology approaches. Emerging evidences show that epigenetic regulation plays a crucial role in the regulation of these mentioned processes, constituting a still unexploited strategy to modulate seed traits. The present review will provide an up-date of the current knowledge on seed pre-germinative metabolism, gathering the most relevant results from physiological, genetics, and omics studies conducted in model and crop plants. The effects exerted by the biotic and abiotic stresses and priming are also addressed. The possible implications derived from the modulation of pre-germinative metabolism will be discussed from the point of view of seed quality and technology.

  2. Application of germination inhibitors in organic solvents to conifer seeds. Information report No. 0-X-371

    Energy Technology Data Exchange (ETDEWEB)

    Groot, A.

    1985-12-31

    Study to determine whether the germination inhibitors abscisic acid and coumarin could be applied to black spruce and jack pine seed with organic solvents to delay germination. If successful, the treatment would delay field germination of seeds sown in mid to late summer until the following spring, thus reducing the risk of immature plants being affected by late fall frosts. Results were expressed in germination value, peak day, and germination capacity on the basis of a 28-day germination period. Effects of treatment on the variables were examined by means of one-way or two-way analysis of variance with completely randomized designs.

  3. EFECT OF THE INOCULATION OF Rhodococcus fascians AND Azospirillum halopraeferens IN GERMINATION OF PALO FIERRO (Olneya tesota A. Gray UNDER GREENHOUSE CONDITIONS

    Directory of Open Access Journals (Sweden)

    Edgar Omar Rueda Puente

    2017-05-01

    Full Text Available The growth-promoting bacteria in plants (BGPB are a group of different species of bacteria can increase plant growth and productivity. Which can benefit plants through their own bacterial metabolism (phosphate solubilizing, producing hormones or fixing nitrogen. At present, desertification is a growing phenomenon worldwide, afforestation is one of the common solutions to combat this problem. Trees for reforestation are initially grown in greenhouses or nurseries. Among numerous reforestation practices, there is an alternative that inoculation with PGPB. Is a forest species that is endemic Olneya tesota Sonoran Desert, which is in danger of extinction. The objective was to evaluate the effect of bacteria growth promoter in plants with Rhodococcuis fascians and Azospirillum halopraeferens on germination and emergence of Ironwood under four salt concentrations (0, 0.25, 0.5 and 0.75 M NaCl under greenhouse conditions. Were obtained ironwood seeds in the region of Santa Ana, Sonora. Under greenhouse conditions was evaluated emergence percentage, germination rate, height, plant root length, fresh and dry weight of plant, number of bacterial cells attached to the root system, fresh and dry weight of the root. The results indicate that the germination percentage and other variables evaluated decreased as salinity increases. However, these changed positively to inoculation with bacteria R. fascians and A. halopraeferens.

  4. Approaches to the indirect evaluation of germination and vigour

    Directory of Open Access Journals (Sweden)

    Matthews S.

    1998-01-01

    Full Text Available In comparisons of six seed lots of different F1 hybrid cultivars of cauliflower with similarly high laboratory germinations (above 90% separation in germination was achieved after controlled deterioration (C.D. at 24% moisture content (m.c. and 45 0C for 24 hours. This measure of vigour was related to the position of the lots on the seed survival curve and was highly predictive of the longevity of the lots when stored at 15% m.c. and 20 0C for 12 and 16 weeks. When each seed lot was deteriorated at 24% m.c. for increasing times (from 0 to 36 hours a reduction in the subsequent percentage germination was seen, which, using probit transformed percentages, was significantly and linearly related to the leakage of electrolytes into seed soak water over 24 hours. The case is made for an approach to the indirect evaluation of germination and vigour using C.D. followed by measurements of leakage that could be more discerning and rapid than the present laboratory germination test.

  5. Performance of seeds Crambe exposed to pre-germination treatments

    International Nuclear Information System (INIS)

    Rocha Cardoso, Rebeca; Costa Nobre, Danubia Aparecida; Santos de Souza David, Andreia Marcia; Ribeiro Amaro, Hugo Tiago; Borghetti, Renato Antonio; Costa, Marcia Regina

    2014-01-01

    Encouraging the production and use of biodiesel, seeds of crambe today constitute one of the best options for the supply of raw material, is also an excellent alternative for autumn-winter crop rotation order. The aim of this study was to evaluate the efficiency of combined pre-germination treatments on the seed behavior of Crambe. From a seed sample of FMS Brilhante cultivar, an experimental design completely randomized with a 2 x 5 factorial arrangement was performed. it was formed from combination of two structural conditions, seeds with or without pericarp, and treatments with or without giberelic acid, being: control (no treatment); seeds pre-soaked in distilled water for 24 hours as control; and seeds pre-soaked in gibberellic acid at 4 % at different concentrations (400, 500 and 600 mg.L"-1). Water content, first count germination, germination, seedling emergence and emergence rate index were determined. From these results it is concluded that removal of the pericarp in seed of Crambe, cultivar FMS brilhante, accelerated the germination rate, however, decreased your final percentage. The pre-soaking in gibberellic acid (400, 500 and 600 mg L"-1) for 24 hours, increased the germination and seed vigor crambe with pericarp.

  6. Seed Germination and Cuttings Growth of Piper Aduncum

    Science.gov (United States)

    Susanto, D.; Sudrajat; Suwinarti, W.; Amirta, R.

    2018-04-01

    Sirih hutan (Piper aduncum L) is one of group shurbs tropical species, has potential to be developed as raw material of biomass based electricity. The aim of this research was to know seed germination and cuttings growth of P. aduncum plant as the first step in cultivation of this plant. Observation of flowers and fruits were done in secondary forest, while seed germination and growth of shoot cuttings were done in the laboratory. The results showed that P. aduncum seeds can be germinated in a relatively short time of 17 to 25 days with a fairly high germination percentage of 90 ± 8.16% and germination rate of 4.7 ± 0.34%. The growth of seedlings at 2 months old was 4.78 ± 0.42 cm, plant height 3.97 ± 0.27 cm, and relative growth rate 0.33 ± 0.14%. The treatment of synthetic growth regulator had significant effect on shoot growth and root number on the plant stem cuttings. Preparation of seedlings ready to plant in a generative and vegetative for cultivation of these plants in the experimental plot.

  7. GERMINATION OF GRASSES DUE TO INOCULATION DIAZOTROPHIC BACTERIA

    Directory of Open Access Journals (Sweden)

    C. D. A. Moreira

    2014-07-01

    Full Text Available The germination of forage grasses suffers from numbness and a natural tendency to low quality. The use of microorganisms inoculated in seeds with the purpose of increasing and meet the demand of some nutrient has been shown to be efficient, but the role of the microorganism in germination and rate of force is still unknown. Therefore the goal as study was to evaluate the germination rate of seeds of three cultivars of Brachiaria brizantha CV. Marandu, b., b. brizantha CV. Xaraés and b. humidícola cv Tupi and a cultivar of millet, P. hybrid cv Massai depending on the bacterium Azospirillum brasilense diazotrofic inoculation (nitrogen-fixing. Germination test was used in seed dispersal to assess the effect of first count (VPC in the treatments with and without inoculation. It was done also conducted further tests of electrical conductivity, weight of thousand seeds and water content. The delineation used was randomized entirely (DIC and the statistical analysis carried out through the analysis of variance and comparison of means using the Tukey test, the 5% probability. Massai grass seeds have the highest rate of force of first count in both treatments. Inoculation of bacterium Azospirillum brasilense did not affect the values of force of first count on seeds of the cultivars Marandu, Xaraés, Tupi and Massai. The seeds of the massai have higher germination speed relative the other cultivars evaluated when inoculated.

  8. Optimal treatment increased the seed germination of Salvia verticillata L.

    Directory of Open Access Journals (Sweden)

    ALALEH KHAKPOOR

    2015-12-01

    Full Text Available Most seeds of the medicinal species are variable regarding their ecological compatibility with environmental conditions. Therefore, identifying the ecophysiological factors that affect dormancy and create optimal conditions for seed germination of medicinal plants is necessary for their culture and production. To evaluate the effect of different treatments on seed germination of medicinal species of Salvia verticillata, collected in the summer of 2010 in Eastern Azarbaijan, we have performed completely randomized experimental tests with 4 replications. The experimental design of treatment prior to growth included: scrape the skin with sandpaper, treatment with 500 ppm gibberellic acid for 24 and 48 h, treatment with citric acid for 10, 20 and 30 minutes, chilling for 2 and 4 weeks, treatment with warm water at 70°C and control treatment. Results showed that the effect of different treatments was significant on seed germination percent of the medicinal plant Salvia verticillata. Scrape the skin with sandpaper, citric acid treatment for 10, 20 and 30 minutes, and gibberellic acid treatment for 24 hours, increased the germination percentage compared to the control treatment. The most positive impact was observed on the dormancy breaking and germination of medicinal species Salvia verticillata.

  9. Fluridone: a combination germination stimulant and herbicide for problem fields?

    Science.gov (United States)

    Goggin, Danica E; Powles, Stephen B

    2014-09-01

    Problem weeds in agriculture, such as Lolium rigidum Gaud., owe some of their success to their large and dormant seed banks, which permit germination throughout a crop-growing season. Dormant weed seed banks could be greatly depleted by application of a chemical that stimulates early-season germination and then kills the young seedlings. Fluridone, a phytoene desaturase-inhibiting herbicide that can also break seed dormancy, was assessed for its efficacy in this regard. The germination of fluridone-treated Lolium rigidum seeds was stimulated on soils with low organic matter, and almost 100% seedling mortality was observed, while the treatment was only moderately effective on a high-organic-matter potting mix. Seedlings from wheat, canola, common bean and chickpea seeds sown on fluridone-treated sandy loam were bleached and did not survive, but lupins and field peas grew normally. This proof-of-concept study with fluridone suggests that it may be possible to design safe and effective molecules that act as germination stimulants plus herbicides in a range of crop and soil types: a potentially novel way of utilising herbicides to stimulate seed bank germination and a valuable addition to an integrated weed management system. © 2014 Society of Chemical Industry.

  10. Secondary Metabolites Produced during the Germination of Streptomyces coelicolor

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    Matouš Čihák

    2017-12-01

    Full Text Available Spore awakening is a series of actions that starts with purely physical processes and continues via the launching of gene expression and metabolic activities, eventually achieving a vegetative phase of growth. In spore-forming microorganisms, the germination process is controlled by intra- and inter-species communication. However, in the Streptomyces clade, which is capable of developing a plethora of valuable compounds, the chemical signals produced during germination have not been systematically studied before. Our previously published data revealed that several secondary metabolite biosynthetic genes are expressed during germination. Therefore, we focus here on the secondary metabolite production during this developmental stage. Using high-performance liquid chromatography-mass spectrometry, we found that the sesquiterpenoid antibiotic albaflavenone, the polyketide germicidin A, and chalcone are produced during germination of the model streptomycete, S. coelicolor. Interestingly, the last two compounds revealed an inhibitory effect on the germination process. The secondary metabolites originating from the early stage of microbial growth may coordinate the development of the producer (quorum sensing and/or play a role in competitive microflora repression (quorum quenching in their nature environments.

  11. Germination and seedling morphology of four South American Smilax (Smilacaceae

    Directory of Open Access Journals (Sweden)

    Aline Redondo Martins

    2012-03-01

    Full Text Available Species of Smilax, also known as greenbrier, are widely distributed in Brazil and their commercial trades are carried out by the extractivism of native species. We the aim to provide information about the germination and development of seedlings in four Smilax species, different experiments were developed under controlled conditions. We evaluated two germination treatments: temperature (30ºC and 20-30ºC and light (presence/ absence, and for few cases the tetrazolium treatment was applied. A different treatment response was observed among the studied species. Light had a significant influence in S. brasiliensis, with the highest germination rates at 20-30ºC in dark conditions. S. campestris showed significant differences among temperature treatments, but not to light; while S. cissoides showed high germination rates (66-78%, independently of treatment. However, S. polyantha had low germination rates (19-24%. After one year, the expanded leaves showed different characteristics among the studied species. Leaves of S. brasiliensis were ovate, coriaceous, three main veins and prickle-like structures only on the midrib on abaxial face. S. campestris leaves were oblong, coriaceous and prickle-like structures were located at the leaf midrib and margin. S. cissoides had ovate-elliptic, membranaceous leaves, with three main veins with prickle-like structures on the abaxial face. S. polyantha leaves showed ovateelliptic, coriaceous leaves, with three main veins, translucent secondary veins and no prickle-like structures. A seedling identification key was elaborated based on morphological characteristics.

  12. Germination and seedling morphology of four South American Smilax (Smilacaceae).

    Science.gov (United States)

    Martins, Aline Redondo; Soares, Anielca Nascimento; Bombo, Aline Bertolosi; Fidelis, Alessandra; Novembre, Ana Dionisia da Luz Coelho; da Glória, Beatriz Appezzato

    2012-03-01

    Species of Smilax, also known as greenbrier, are widely distributed in Brazil and their commercial trades are carried out by the extractivism of native species. We the aim to provide information about the germination and development of seedlings in four Smilax species, different experiments were developed under controlled conditions. We evaluated two germination treatments: temperature (30 degrees C and 20-30 degrees C) and light (presence/ absence), and for few cases the tetrazolium treatment was applied. A different treatment response was observed among the studied species. Light had a significant influence in S. brasiliensis, with the highest germination rates at 20-30 degrees C in dark conditions. S. campestris showed significant differences among temperature treatments, but not to light; while S. cissoides showed high germination rates (66-78%), independently of treatment. However, S. polyantha had low germination rates (19-24%). After one year, the expanded leaves showed different characteristics among the studied species. Leaves of S. brasiliensis were ovate, coriaceous, three main veins and prickle-like structures only on the midrib on abaxial face. S. campestris leaves were oblong, coriaceous and prickle-like structures were located at the leaf midrib and margin. S. cissoides had ovate-elliptic, membranaceous leaves, with three main veins with prickle-like structures on the abaxial face. S. polyantha leaves showed ovate-elliptic, coriaceous leaves, with three main veins, translucent secondary veins and no prickle-like structures. A seedling identification key was elaborated based on morphological characteristics.

  13. Substrates and temperatures in the germination of Eriotheca gracilipes seeds

    Directory of Open Access Journals (Sweden)

    Paulo Alexandre Fernandes Rodrigues de Melo

    Full Text Available ABSTRACT The Eriotheca gracilipes (K. Schum. A. Robyns is a forest specie that belongs to the Bombacaceae family and is considered an endemic specie from the Brazilian savanna. The aim of this study was to evaluate the best substrate and temperature for the vigor and germination test of E. gracilipes seeds. The experiment was carried out in a randomized design with a 4 x 7 factorial, with 28 treatments with the combination of four temperatures (20; 25; 30 and 20-30 ºC and seven substrates (coarse vermiculite, medium vermiculite, sand, Basaplant®, paper towel, on and between filter papers, with 4 repetitions of 25 seeds each. It was assessed germination, first count of germination, and germination speed index. In conclusion, for germination and vigor tests of Eriotheca gracilipes seeds it is recommended the paper roll as substrate at temperatures of 20-30, 25 or 30 ºC, and the Basaplant® and paper roll at the temperature of 30 ºC, respectively.

  14. Evaluation of Oxygen Deficit Stress on Germination Indicators and Seedling

    Directory of Open Access Journals (Sweden)

    F Hoseini

    2012-06-01

    Full Text Available To investigate the relationship oxygen deficit stress on germination indicators and seedling growth of five wheat cultivars in laboratory condition, an experiment with Randomized Complete Block design in factorial arrangement with three replications was conducted in 2008. The treatments consisted of five wheat cultivars (Chamran, Flat, Roshan, Stare and Shole as A factor, and two oxygen level (normal seed and seed under oxygen deficit stress conditions as B factor in each of these figures was done. Results showed that oxygen deficit stress caused to decrease for various cultivars germination percentage, germination rate, allometric coefficient, seed vigor index and other germination indicators. Therefore, this test as a suitable method for determining the quality of various seed lot can be used in the water logging condition. In addition, among different cultivars characterized that Roshan cultivar was more resistant to oxygen deficit stress than Chamran, Flat and Star cultivars. Although Chamran cultivar is common cultivar in Khouzestan, but of look most germination indicators arranged as weak seed class. The highest correlation coefficients among the tested cultivars have been related to seed vigor with seedling length and dry weight of radicle with seedling with 0.92 and 0.90, respectively.

  15. Windows of opportunity for germination of riparian species after restoring water level fluctuations: a field experiment with controlled seed banks

    NARCIS (Netherlands)

    Sarneel, J.M.; Janssen, R.H.; Rip, W.J.; Bender, I.; Bakker, E.S.

    2014-01-01

    Restoration activities aiming at increasing vegetation diversity often try to stimulate both dispersal and germination. In wetlands, dispersal and germination are coupled as water and water level fluctuations (WLF) simultaneously influence seed transport and germination conditions (soil moisture).

  16. [Effects of fluridone, gibberellin acid and germination temperature on dormancy-breaking for Epimedium wushanense].

    Science.gov (United States)

    Su, He; Wang, Yue; Yang, Yang; Dong, Xue-Hui

    2016-07-01

    We introduced Epimedium wushanense seed which has been stratified for 90 days at 10/20 ℃ as experimental materials, with which we studied the effects of fluridone, gibberellin acid and temperature on E. wushanense germination. The results were suggested as shown below. ①Temperature, fluridone and gibberellin acid can both solely or jointly affect germination energy, germination rate significantly. Among those factors, fluridone affect germination rate and germination energy the most, followed by gibberellin acid and temperature. The highest germination rate under 4 ℃ and 10/20 ℃ stratification are 79.3%, 72.0% respectively, which resulted from treatment of F10GA300 and F20GA200 respectively. The highest germination energy under 4 ℃ and 10/20 ℃ stratification are 52.7%, 52.0%, respectively, which both resulted from F20GA200. ②Compared with 4 ℃ germination, seed could not germinate at 10/20 ℃ germination. Nontheless, application of fluridone can lead E. wushanense seeds to germinating.③The effects of gibberellin acid and interaction between gibberellin acid and fluridone significantly affect seed rotten rate during germination. In addition, soaking is another remarkable factor which increased seed rotten rate. As a result, it is feasible to promote E. wushanense dormancy releasing with gibberellin acid and fluridone associating with a proper germination temperature. Further, it is necessary taking actions to avoid seed rotten rate for saving E. wushanense nurseries'cost. Copyright© by the Chinese Pharmaceutical Association.

  17. Effect of water and saline stress on germination of Atriplex nummularia (Chenopodiaceae)

    International Nuclear Information System (INIS)

    Ruiz, Monica B; Parera, Carlos A

    2013-01-01

    Saline soils, characteristic of arid zones, can affect the germination of the species due to low water potential or ion toxicity. The effect of water and saline stress on germination was evaluated in atriplex nummularia a potential source of forage for arid zones. the seeds were scarified to reduce the inhibitory effect on germination and incubated in at 23 Celsius degrade on germination paper imbibed with solutions of sodium chloride (NaCl) and polyethylene glycol (peg) at three water potentials: -0,5; -1,0 and -1,5 MPA. The percentage germination and germination speed were significantly affected by the concentration of the solution and the solute used. While more negative osmotic potentials, the percentage of germination and germination speed were significantly lower. The seeds germinated in peg solution have higher germination and germination speed than the seeds germinated in NaCl, especially in -1,0 MPA. The data suggest that the seeds of a. nummularia show sensitivity to the presence of Na+ and Cl- ions affecting the germination process.

  18. Effect of electron beam irradiation on seed germination

    Energy Technology Data Exchange (ETDEWEB)

    Han, Seunghee; Bae, Youngmin [Changwon Univ., Changwon (Korea, Republic of)

    2013-07-01

    Effect of electron beam irradiation on seed germination was investigated in this research. Electron beam of 0.5, 1.0, 1.5 and 2.0 kGy was irradiated to the seeds of lettuce, green onion and cucumber, and the irradiated seeds were incubated at 25 .deg. Cn Nitsch medium solidified with 0.2% Phytagel. Germination percentage and the length of the sprouts were determined after 72 hours. Germination percentage of lettuce seeds was greatly reduced by the irradiation, and that of the green onion and cucumber were moderately reduced or unchanged by the irradiation. Although average length of the lettuce sprouts was reduced severely, that of the green onion and cucumber was unchanged or moderately reduced. Conclusively, electron beam irradiation might be a useful way of disinfecting some plant seeds including green onion and cucumber.

  19. Study of homeopathic drugs on seed germination and fungal growth

    International Nuclear Information System (INIS)

    Hanif, A.; Dawar, S.

    2016-01-01

    In vitro, seeds of mungbean, sunflower, okra and mashbean were treated with homeopathic drugs namely Arnica montana and Thuja occidentalis (30C) were evaluated against root rot fungi. Different concentrations like 100, 75 and 50% v/v were tested to investigate seeds germination and inhibition of root rot fungi such as Fusarium oxysporum, Rhizoctonia solani and Macrophomina phaseolina. Results indicated that treated seeds of mungbean, sunflower, okra and mashbean with pure homeopathic drugs (100% v/v) by A. montana and T. occidentalis (30C) showed complete germination (100%), greater root length and excellent inhibition of root infecting pathogens. However, tested seeds treated with 75 and 50% v/v concentrations (prepared from 30C) by homeopathic drugs, respectively recorded significant increase in germination, root length and maximum zone of inhibition. (author)

  20. Seed germination of peanuts irradiated with cobalt (60CO)

    International Nuclear Information System (INIS)

    Alves, Niedja Marrize C.; Almeida, Francisco de Assis C.; Gomes, Josivanda P.; Pessoa, Elvira B.; Leal, Artur S. Cavalcanti

    2010-01-01

    This work was realized to evaluate the effect of gamma irradiation ( 60 Co) at doses 0, 0.50, 1.00, 1.50, 2.00, 2.50, 3.00 and 4.00 kGy, on germination of seeds of peanut, cultivar BR1. Irradiation Department of Nuclear, UFPE, where he received after the irradiation, they were stored in packing of PET and polyethylene braided with a time of 90 days. Through the results, obtained monthly, concluded that the dose of 0.5 kGy was effective in the germination of seeds of peanut, not affecting its power of germination and overcoming the witness within 30 to 60 days. (author)

  1. Pre-germination treatments on palm tree seeds

    Directory of Open Access Journals (Sweden)

    Maitê dos Santos Ribeiro

    2015-12-01

    Full Text Available Palm tree seeds present slow and uneven germination. Therefore, the objective of this research was to evaluate the efficiency of pre-germination treatments in promoting germination and early seedling growth of palm tree (Euterpe edulis Martius. Treatments were: control, immersion in GA3 solution, exposure to ethylene, water immersion, H2SO4 immersion, mechanical scarification, stratification for 30 days at 10 °C, and scarification followed by stratification. Soaking seeds in gibberellic acid (GA3; 2000 µL L-1 for 24 h or their exposure to ethylene (1000 µL L-1 for 24 h are effective for promoting emergence, which started 30 days after seed treatment, and for early seedling growth of palm tree.

  2. Effect of electron beam irradiation on seed germination

    International Nuclear Information System (INIS)

    Han, Seunghee; Bae, Youngmin

    2013-01-01

    Effect of electron beam irradiation on seed germination was investigated in this research. Electron beam of 0.5, 1.0, 1.5 and 2.0 kGy was irradiated to the seeds of lettuce, green onion and cucumber, and the irradiated seeds were incubated at 25 .deg. Cn Nitsch medium solidified with 0.2% Phytagel. Germination percentage and the length of the sprouts were determined after 72 hours. Germination percentage of lettuce seeds was greatly reduced by the irradiation, and that of the green onion and cucumber were moderately reduced or unchanged by the irradiation. Although average length of the lettuce sprouts was reduced severely, that of the green onion and cucumber was unchanged or moderately reduced. Conclusively, electron beam irradiation might be a useful way of disinfecting some plant seeds including green onion and cucumber

  3. Precocious germination and its regulation in embryos of triticale caryopses

    Directory of Open Access Journals (Sweden)

    Stanisław Weidner

    2014-01-01

    Full Text Available Triticale var. Lasko embryos, isolated from grain gathered at milk ripeness, the beginning of wax ripeness and at full ripeness, were allowed to germinate for 48 h on agar with glucose. The highest incorporation of tritiated adenosine into polyribosomal RNA during germination was found in the ribosome fractions from embryos of grain gathered at full ripeness, lower incorporation was in preparations from embryos of milk ripe grain and the lowest in preparations from embryos of wax ripe grain. Different tendencies were observed in respect to the synthesis of ribosomal proteins. The highest incorporation of 14C-amino acids into ribosomal proteins was found in preparations of ribosome fractions from embryos of milk ripe grain, lower in preparations of embryos from fully ripe grain, the lowest in preparations of embryos from wax ripe grain. ABA (10-4 M completely inhibited the external symptoms of germination of immature embryos, while its inhibition of the synthesis of polyribosomal RNA and ribosomal proteins was greater the more mature the embryos that were germinated. The greatest stimulation of precocious germination by exogenous BA and GA3 was demonstrated in the least mature embryos isolated from milk ripe grain. Under the influence of both stimulators, an increase of the proportion of polyribosomes in the total ribosome fraction occurred in this sample, as did a rise in the intensity of ribosomal protein synthesis. The incorporation of 3H-adenosine into polyribosomal RNA, however, was lower than in the control sample. The results obtained suggest that the regulation of precocious germination of triticale embryos by phyto-hormones is not directly related to transcription.

  4. EFFECTS OF LIGHT WAVELENGTHS AND COHERENCE ON BASIDIOSPORES GERMINATION

    Directory of Open Access Journals (Sweden)

    Natalia Poyedinok

    2015-02-01

    Full Text Available The effects of light wavelengths and coherence on basidiospore germination of Agaricus bisporus, Flammulina velutipes, Ganoderma applanatum, Ganoderma lucidum, Hericium erinaceus, Lentinus edodes and Pleurotus ostreatus have been studied. Short-term low-intensity irradiation by coherent (laser light wavelength 488.0 nm and 632.8 nm at doses 45 and 230 mJ/cm2 has significantly increased the number of germinated basidiospores. It has established that there are differences in the photosensitivity not only between species but also between strains. Spores irradiation by 514.5 nm light has been either neutral or inhibitory. A comparative analysis of basidiospores sensitivity to laser and LED light has also been conducted. To stimulate germination of basidiospores and growth of monokaryons the most suitable solution was to use red coherent and incoherent light of 632.8 nm and 660,0 nm for A. bisporus, G. applanatum and P. ostreatus, red and blue coherent light of 632.8 nm and 488,0 nm for F. velutipes, and both red and blue laser and LED light G. lucidum and H. erinaceus and for L. edodes. No essential difference of a continuous wave mode and intermittent mode light effect at the same doses and wavelength on spore germination were revealed. Light influence has reduced germination time and formation of aerial mycelium on agar medium as compared to the original value and increased the growth rate of monosporous isolates. Characterization of basidiospores photosensitivity and development of environmentally friendly stimulating methods of their germination is important for creating highly effective technologies of mushrooms selection and cultivation.

  5. Development of cookies made with cocoyam, fermented sorghum and germinated pigeon pea flour blends using response surface methodology.

    Science.gov (United States)

    Okpala, Laura C; Okoli, Eric C

    2014-10-01

    Cookies were produced from blends of cocoyam, fermented sorghum and germinated pigeon pea flours. The study was carried out to evaluate the effects of varying the proportions of these components on the sensory and protein quality of the cookies. The sensory attributes studied were colour, taste, texture, crispness and general acceptability while the protein quality indices were biological value (BV) and net protein utilization (NPU). Mixture response surface methodology was used to model the sensory and protein quality with single, binary and ternary combinations of germinated pigeon pea, fermented sorghum and cocoyam flours. Results showed that BV and NPU of most of the cookies were above minimum acceptable levels. With the exception of cookies containing high levels of pigeon pea flour, cookies had acceptable sensory scores. Increase in pigeon pea flour resulted in increase in the BV and NPU. Regression equations suggested that the ternary blends produced the highest increase in all the sensory attributes (with the exception of colour).

  6. Different sterilization methods for overcoming internal bacterial infection in sunflower seeds

    Directory of Open Access Journals (Sweden)

    Taški-Ajduković Ksenija J.

    2005-01-01

    Full Text Available During culture of protoplasts in agarose droplets, permanent problem was bacterial infection. It was assumed that the seeds are the origin of infection, so different sterilization methods were tested in order to overcome this problem. Germination, infection of seeds and hypocotyls and their growth were examined. Based on these parameters, the best result was obtained with the combined use of 5% commercial bleach and dry heating at 45°C.

  7. Bacillus subtilis spore survival and expression of germination-induced bioluminescence after prolonged incubation under simulated Mars atmospheric pressure and composition: implications for planetary protection and lithopanspermia

    Science.gov (United States)

    Nicholson, Wayne L.; Schuerger, Andrew C.

    2005-01-01

    Bacterial endospores in the genus Bacillus are considered good models for studying interplanetary transfer of microbes by natural or human processes. Although spore survival during transfer itself has been the subject of considerable study, the fate of spores in extraterrestrial environments has received less attention. In this report we subjected spores of a strain of Bacillus subtilis, containing luciferase resulting from expression of an sspB-luxAB gene fusion, to simulated martian atmospheric pressure (7-18 mbar) and composition (100% CO(2)) for up to 19 days in a Mars simulation chamber. We report here that survival was similar between spores exposed to Earth conditions and spores exposed up to 19 days to simulated martian conditions. However, germination-induced bioluminescence was lower in spores exposed to simulated martian atmosphere, which suggests sublethal impairment of some endogenous spore germination processes.

  8. Seed dormancy and germination vary within and among species of milkweeds

    Science.gov (United States)

    Kaye, Thomas N; Sandlin, Isaac J; Bahm, Matt A

    2018-01-01

    Abstract Pollinators in general and monarch butterflies in particular are in decline due to habitat loss. Efforts to restore habitats for insects that rely on specific plant groups as larvae or adults depend on the ability of practitioners to grow and produce these plants. Monarch larvae feed exclusively on milkweed species, primarily in the genus Asclepias, making propagation and restoration of these plants crucial for habitat restoration. Seed germination protocols for milkweeds are not well established, in part due to the large number of milkweed species and conflicting reports of seed dormancy in the genus. We tested for seed dormancy and the optimum period of cold stratification in 15 populations of A. speciosa and 1–2 populations of five additional species, including A. asperula, A. fascicularis, A. subulata, A. subverticillata and A. syriaca. We exposed seeds to cold (5 °C) moist conditions for 0, 2, 4, 6 and 8 weeks and then moved them to 15 °C/25 °C alternating temperatures. In A. speciosa, dormancy was detected in eight populations, and this dormancy was broken by 2–4 weeks of cold stratification. The remaining seven populations showed no dormancy. Seed dormancy was also detected in two populations of A. fascicularis (broken by 4–6 weeks of cold stratification) and a single population of A. syriaca (broken by 2 weeks of cold stratification). No dormancy was detected in A. asperula, A. subulata or A. subverticillata. Seed dormancy appears to be widespread in the genus (confirmed in 15 species) but can vary between populations even within the same species. Variation in seed dormancy and cold stratification requirements within and among Asclepias species suggests local adaptation and maternal environments may drive seedling ecology, and that growers should watch for low germination and use cold stratification as needed to maximize seed germination and retain genetic variability in restored populations. PMID:29593856

  9. Esterase activity as a novel parameter of spore germination in Bacillus anthracis

    International Nuclear Information System (INIS)

    Ferencko, Linda; Cote, Mindy A.; Rotman, Boris

    2004-01-01

    Spores of Bacillus anthracis were shown to produce esterase activity about 4 min after exposure to conventional germinants such as combinations of amino acids and purine ribosides. Neither amino acids nor ribosides alone induce germination and esterase activity. Expression of esterase activity was chloramphenicol resistant, and correlated with loss of spore refractivity, a traditional parameter of early germination. Based on these observations, we hypothesized that esterase activity could be used as a novel parameter for quantifying early events during spore germination. To test this hypothesis, we measured expression of esterase activity under a variety of germinating conditions. Using diacetyl fluorescein as fluorogenic substrate of esterases, we demonstrated that esterase activity was invariably induced whenever spores were triggered by known germinants. Moreover, D-alanine, an inhibitor of L-alanine-mediated germination, was found to significantly inhibit expression of esterase activity. In terms of molecular mechanisms, esterase expression could represent activation of proteases at the onset of spore germination

  10. germination of seeds from earlier fruits of bitter and sweet african

    African Journals Online (AJOL)

    ACSS

    2014-11-18

    Nov 18, 2014 ... Seed germination speed significantly depended on the drying level and the germination system (sunshine versus covered condition). .... the West African forest block) is characterised ..... tropical and subtropical America.

  11. Effects of seed priming and water potential on seed germination and ...

    African Journals Online (AJOL)

    Administrator

    2011-05-23

    May 23, 2011 ... (without seed drying), primed and 12 h drying on seed germination of wheat .... completely with the lower half and the paper were rolled and placed ..... water stress and control of germination: a review. Plant Cell Environ.

  12. Proteomic analysis of Magnolia sieboldii K. Koch seed germination.

    Science.gov (United States)

    Lu, Xiu-Jun; Zhang, Xiao-Lin; Mei, Mei; Liu, Guang-Lin; Ma, Bei-Bei

    2016-02-05

    Magnolia sieboldii is a deciduous tree native to China. This species has a deep dormancy characteristic. To better understand seed germination, we used protein analysis of changes in seed protein at 0, 65, 110 and 150 d of stratification. Comparative 2DE analysis of M. sieboldii seed protein profiles at 0, 65, 110 and 150 d of stratification revealed 80 differentially abundance protein species. Comparative analysis showed that ADP-glucose pyrophosphorylase small subunit was degraded during germination. In particular, it was degraded almost completely at 110 d of germination. Starch granules in the microstructure decreased after 65 d of stratification. Starch granules provided a sufficient amount of substrates and ATPs for subsequent germination. Four storage protein species were identified, of which all were down accumulated. Spots 44 and 46 had different MW and pI values, spots 36 and 46 had nearly the same MW with pI shift in the 2-DE gels, suggesting that they might be present as different isoforms of the same protein family and the post translational modification. Our results suggested that degradation of starch granules and storage protein species prepared the seed embryo for growth, as well as regulated seed germination. The present proteomics analysis provides novel insights into the mobilisation of nutrient reserves during the germination of M. sieboldii seeds. To better understand seed germination, a complex developmental process, we developed a proteome analysis of M. sieboldii seed. We performed the first comprehensive proteomic and microstructure analysis during different seed stratification stages of M. sieboldii. Among the 80 protein species, 26 were identified, 7 and 14 protein species were up or down accumulated significantly. Many of the identified key proteins were involved in embryo development, starch biosynthesis and energy metabolism, Microstructure of stratification seed analysis revealed degradation of starch was used for preparing the seed

  13. The influence of light on the germination of potato seeds

    Directory of Open Access Journals (Sweden)

    A. Listowski

    2015-06-01

    Full Text Available The influence of white and coloured Light and of the darkness on the germination of potato seeds was investigated. Potato seeds germinate in light as well as in darkness. Bed light is stimulative. Far-red and blue light depending of the origin of the seeds populations acted or inhibitive or only as a delaying factor. The after effect of R after FR or FR after R was also studied. The R-FR or FR-R photoreaction observed by potato seeds, differ from the classic pattern established by lettuce and tomato seeds.

  14. Germination of guatambu seeds subjected to two light regimes

    Directory of Open Access Journals (Sweden)

    Karina Guollo

    2015-09-01

    Full Text Available Guatambu (Aspidosperma parvifolium A. DC. is a species that faces extinction in different regions of Brazil. The aim of this study was to evaluate the influence of photoperiod on germination of guatambu seeds at 25°C. The statistical procedure used was factorial design with two factors. Factor A was seed lots (Mother tree A, B, and C and factor B was photoperiod (dark and 12 h of photoperiod. Guatambu seeds are not affected by photoperiod condition during the germination process.

  15. Germination of red alder (Alnus rubra) seed from several locations in its natural range

    Energy Technology Data Exchange (ETDEWEB)

    Elliott, D.M.; Taylor, I.E.P.

    1981-01-01

    Tests were carried out on stratified, pre-soaked or untreated seeds. Germination of all provenances and treatments was more than 90%, except for one provenance showing physiological dormancy in which germination was low, but increased significantly with stratification and presoaking; dormancy could be broken completely by chilling at 0 degrees C for 5 days. Significant interactions were found between provenances and treatments for both germination % and seed vigour (as measured by germination value).

  16. Salt Stress Represses Soybean Seed Germination by Negatively Regulating GA Biosynthesis While Positively Mediating ABA Biosynthesis

    OpenAIRE

    Kai Shu; Ying Qi; Feng Chen; Yongjie Meng; Xiaofeng Luo; Haiwei Shuai; Wenguan Zhou; Jun Ding; Junbo Du; Jiang Liu; Feng Yang; Qiang Wang; Weiguo Liu; Taiwen Yong; Xiaochun Wang

    2017-01-01

    Soybean is an important and staple oilseed crop worldwide. Salinity stress has adverse effects on soybean development periods, especially on seed germination and post-germinative growth. Improving seed germination and emergence will have positive effects under salt stress conditions on agricultural production. Here we report that NaCl delays soybean seed germination by negatively regulating gibberellin (GA) while positively mediating abscisic acid (ABA) biogenesis, which leads to a decrease i...

  17. Bacterial lung abscess

    International Nuclear Information System (INIS)

    Groskin, S.A.; Panicek, D.M.; Ewing, D.K.; Rivera, F.; Math, K.; Teixeira, J.; Heitzman, E.R.

    1987-01-01

    A retrospective review of patients with bacterial lung abscess was carried out. Demographic, clinical, and radiographical features of this patient group are compared with similar data from patients with empyema and/or cavitated lung carcinoma; differential diagnostic points are stressed. The entity of radiographically occult lung abscess is discussed. Complications associated with bacterial lung abscess are discussed. Current therapeutic options and treatment philosophy for patients with bacterial lung abscess are noted

  18. Evolution of Bacterial Suicide

    Science.gov (United States)

    Tchernookov, Martin; Nemenman, Ilya

    2013-03-01

    While active, controlled cellular suicide (autolysis) in bacteria is commonly observed, it has been hard to argue that autolysis can be beneficial to an individual who commits it. We propose a theoretical model that predicts that bacterial autolysis is evolutionarily advantageous to an individualand would fixate in physically structured environments for stationary phase colonies. We perform spatially resolved agent-based simulations of the model, which predict that lower mixing in the environment results in fixation of a higher autolysis rate from a single mutated cell, regardless of the colony's genetic diversity. We argue that quorum sensing will fixate as well, even if initially rare, if it is coupled to controlling the autolysis rate. The model does not predict a strong additional competitive advantage for cells where autolysis is controlled by quorum sensing systems that distinguish self from nonself. These predictions are broadly supported by recent experimental results in B. subtilisand S. pneumoniae. Research partially supported by the James S McDonnell Foundation grant No. 220020321 and by HFSP grant No. RGY0084/2011.

  19. Peritonitis - spontaneous bacterial

    Science.gov (United States)

    Spontaneous bacterial peritonitis (SBP); Ascites - peritonitis; Cirrhosis - peritonitis ... who are on peritoneal dialysis for kidney failure. Peritonitis may have other causes . These include infection from ...

  20. Hydrothermal time models for conidial germination and mycelial growth of the seed pathogen Pyrenophora semeniperda

    Science.gov (United States)

    Connor W. Barth; Susan E. Meyer; Julie Beckstead; Phil S. Allen

    2015-01-01

    Population-based threshold models using hydrothermal time (HTT) have been widely used to model seed germination. We used HTT to model conidial germination and mycelial growth for the seed pathogen Pyrenophora semeniperda in a novel approach to understanding its interactions with host seeds. Germination time courses and mycelial growth rates for P.semeniperda were...

  1. The Effects of water and salt stresses on germination in two bread ...

    African Journals Online (AJOL)

    Results showed those germination rate was delayed by both solutions in both varieties, with differences between genotypes among growth stages, given that Saisonez genotype showed a higher germination rate than Cascogne genotype in NaCl. NaCl had a lesser effect on genotypes in terms of germination rate and the ...

  2. Impact of crop residues on seed germination of native desert plants ...

    African Journals Online (AJOL)

    Crop residues produce allelochemicals that may inhibit seed germination of many weeds. In this study, I assessed the effect of aqueous extracts of three crop residues (radish, rocket and rhodes) on final germination percentage and germination rate of four desert plants recorded as weeds in the United Arab Emirates farms ...

  3. Bases génétiques et biochimiques de la capacité germinative des ...

    African Journals Online (AJOL)

    recherche et discute de la relation entre capacité germinative des graines et sécurité alimentaire. Mots clé: Semence, capacité germinative, facteurs biochimiques, gènes, systèmes semenciers, sécurité alimentaire. Abstract. Genetic and biochemical bases of seed germination capacity: implications for seed systems and.

  4. Effects of drought and salt stress on seed germination of three ...

    African Journals Online (AJOL)

    use

    2011-12-07

    Dec 7, 2011 ... At sowing, inadequate soil moisture results in irregular seed germination and unsynchronised seedling ... Soil salinity affects germination by either an osmotic stress or ion toxic effect (Bewley and Black, ..... Zhu et al., 2006) as an inert osmoticum in germination tests (Dodd and Donovan, 1999) and is a non- ...

  5. Reduced seed germination in Arabidopsis over-expressing SWI/SNF2 ATPase genes

    NARCIS (Netherlands)

    Leeggangers, H.A.C.F.; Folta, A.; Muras, A.; Nap, J.P.H.; Mlynarova, L.

    2015-01-01

    In the life of flowering plants, seed germination is a critical step to ensure survival into the next generation. Generally the seed prior to germination has been in a dormant state with a low rate of metabolism. In the transition from a dormant seed to a germinating seed, various epigenetic

  6. Physical characterization of Rhipsalis (Cactaceae fruits and seeds germination in different temperatures and light regimes

    Directory of Open Access Journals (Sweden)

    A. B. Lone

    Full Text Available Abstract The germination characteristics of the native cactus species are poorly known, being the temperature and the light the factors that the most interferes in that process. Thus, the objective of the present work was to characterize the fruits and evaluate the influence of the temperature and the light in the seed germination of Rhipsalis floccosa, Rhipsalis pilocarpa and Rhipsalis teres. The tested constant temperatures were 15, 20, 25, 30 and 35 °C and the alternate of 20-30 °C and 25-35 °C in a photoperiod of 10 hours, and with determination of the most appropriate temperature, the germination was tested in light absence. The germination percentage, the index of germination speed and medium time of germination were evaluated. For R. floccosa, the highest germination percentage was at 20 °C. For R. pilocarpa and R. teres, the highest germination percentages occurred in 15 °C and 20 °C. There was correlation to germination percentage between the three species, indicating that they had similar germination behavior. Total absence of germination was verified for the three species in condition of light absence. In conclusion, the temperature of 20 °C is the most suitable for the seed germination of R. floccosa. For the species R. pilocarpa and R. teres, the temperatures of 15 and 20 °C are the most suitable.

  7. Physical characterization of Rhipsalis (Cactaceae) fruits and seeds germination in different temperatures and light regimes.

    Science.gov (United States)

    Lone, A B; Colombo, R C; Andrade, B L G; Takahashi, L S A; Faria, R T

    2016-06-01

    The germination characteristics of the native cactus species are poorly known, being the temperature and the light the factors that the most interferes in that process. Thus, the objective of the present work was to characterize the fruits and evaluate the influence of the temperature and the light in the seed germination of Rhipsalis floccosa, Rhipsalis pilocarpa and Rhipsalis teres. The tested constant temperatures were 15, 20, 25, 30 and 35 °C and the alternate of 20-30 °C and 25-35 °C in a photoperiod of 10 hours, and with determination of the most appropriate temperature, the germination was tested in light absence. The germination percentage, the index of germination speed and medium time of germination were evaluated. For R. floccosa, the highest germination percentage was at 20 °C. For R. pilocarpa and R. teres, the highest germination percentages occurred in 15 °C and 20 °C. There was correlation to germination percentage between the three species, indicating that they had similar germination behavior. Total absence of germination was verified for the three species in condition of light absence. In conclusion, the temperature of 20 °C is the most suitable for the seed germination of R. floccosa. For the species R. pilocarpa and R. teres, the temperatures of 15 and 20 °C are the most suitable.

  8. Lipolytic activity and chilling requirement for germination of some ...

    African Journals Online (AJOL)

    Prunus amygdalus Mill.) seeds germination. In this study, the effect of cold stratification in two almonds varieties: ''Achaak'' a Tunisian cultivar and ''Tuono'' an Italian cultivar was tested. The study revealed, for the first time, that only the Tunisian ...

  9. Seed germination and in vitro propagation of Piliostigma thonningii ...

    African Journals Online (AJOL)

    Piliostigma thonningii is a multipurpose tree of high priority for conservation in Nigeria. Almost all its parts are used in traditional medicine and its seeds are a good source of antioxidant micronutrients, rich in crude protein and carbohydrate. Its seeds are however dormant and the plant is uncultivated. Seed germination and ...

  10. Pollen viability and germination in Jatropha ribifolia and Jatropha ...

    African Journals Online (AJOL)

    The aim of this work is to assess pollen viability using the staining technique and in vitro germination with different concentrations of sucrose in Jatropha ribifolia and Jatropha mollissima, contributing to the knowledge of the reproductive biology and subsidizing their conservation, management and utilization. Pollen viability ...

  11. Dependence of rate of germination of teak ( Tectona grandis ) seeds ...

    African Journals Online (AJOL)

    A study was conducted to determine suitable sources of teak (Tectona grandis) seeds and methods of treating the seeds to promote higher rate of germination, with the objective to supply large quantities of seedlings for developing commercial teak plantations in Ghana. The field work involved seed collection, seed pericarp ...

  12. Seed germination and seedling emergence of Scotch broom (Cytisus scoparius)

    Science.gov (United States)

    Timothy B. Harrington

    2009-01-01

    Scotch broom is a large, leguminous shrub that has invaded 27 U.S. states. The species produces seeds with a hard coat that remain viable in the soil for years. Growth-chamber studies were conducted to determine effects of temperature regime and cold-stratification period on seed germination. Seedling emergence, mortality, and biomass also were studied in response to...

  13. Characterization of germination receptors of Bacillus cereus ATCC 14579

    NARCIS (Netherlands)

    Hornstra, L.M.; Vries, de Y.P.; Wells-Bennik, M.H.J.; Vos, de W.M.; Abee, T.

    2006-01-01

    Specific amino acids, purine ribonucleosides, or a combination of the two is required for efficient germination of endospores of Bacillus cereus ATCC 14579. A survey including 20 different amino acids showed that L-alanine, L-cysteine, L-threonine, and L-glutamine are capable of initiating the

  14. Inhibition of conidial germination and mycelial growth of ...

    African Journals Online (AJOL)

    Twenty-one plants were screened for fungicidal effects on conidial germination and mycelial growth of Corynespora cassiicola. Out of this, 5 plants (Ageratum conyzoides, Centrosema pubescene, Emilia coccinea, Ocimum basilicum and Solanum torvum) were selected for evaluation of concentration effects. Treatment in O.

  15. In vitro spore germination and gametophytic growth development of ...

    African Journals Online (AJOL)

    The effects of sucrose, pH and plant growth hormones on spore germination percentage and gametophyte growths of Pteris tripartita were studied. Various morphological structures of gametophytes were observed namely, filamentous, spatulate and heart stages in the MS culture medium with hormones. After 15 days, the ...

  16. Root Exudate Effect on Germination and Mycelial Growth of ...

    African Journals Online (AJOL)

    The effect of some root exudates on the germination and mycelial growth of sclerotia of Sclerotium rolfsii Sacc. was studied. Root exudates of 5 – 10 days old seedlings from five plants viz: - tomato (Lycopersicum esculenta) maize (Zea mays), garden egg (Solanum melongena), pigeon pea (Cajanus cajan), and pepper ...

  17. Live-imaging of Bacillus subtilis spore germination and outgrowth

    NARCIS (Netherlands)

    Pandey, R.

    2014-01-01

    Spores of Gram-positive bacteria such as Bacillus and Clostridium cause huge economic losses to the food industry. In food products, spores survive under food preservation conditions and subsequent germination and outgrowth eventually causes food spoilage. Therefore efforts are being made to

  18. In vitro germination and growth of babassu ( orbygnia phalerata Mart ...

    African Journals Online (AJOL)

    In vitro germination and growth of babassu (orbygnia phalerata Mart.) embryos subjected to different drying temperatures. Aurélio Rubio Neto, Bethânia Silva Morais De Freitas, Apolyana Lorrayne Souza, Fabiano Guimarães Silva, Juliana De Fátima Sales, Larissa Leandro Pires ...

  19. Germination of witchweed [ Striga hermonthica (del.) Benth.] seeds ...

    African Journals Online (AJOL)

    Abstract. Using an adaptation of the Cut-root technique, twenty-one varieties of soybean were screened at 10, 15 and 20 days after planting (DAP) for the stimulation of S. hermonthica seed germination. ... These varieties may therefore be used in field crop rotation systems as an option for the management of S hermonthica.

  20. Effect of germination on mineral bioavailability of sorghum-based ...

    African Journals Online (AJOL)

    Infant malnutrition due to nutritionally inadequate diets is one of the major concerns in Ethiopia. Children in rural Ethiopia are especially prone to micronutrient deficiencies as they eat from the family dish, which is predominantly plant-based. The main objective of this study is, therefore, to investigate the effect of germination ...

  1. Effect of temperature and salinity on germination of Achillea ...

    African Journals Online (AJOL)

    Achillea fragrantissima and Moringa peregrina are dominant plants in the mountainous desert of Saudi Arabia. The two species suffer from intensive anthropogenic pressures as they have important medicinal uses. This paper aimed to evaluate the effect of temperature and salinity on germination of A. fragrantissima and M.

  2. Comparison of seed priming techniques with regards to germination ...

    African Journals Online (AJOL)

    Seeds of watermelon [Citrullus lanatus (Thunb.) Matsum and Nakai, cv. Crimson Sweet] were used to investigate the effects of different priming techniques on seed germination and early seedling growth. The seeds were soaked in solutions of 0.2% gibberellin (50 mg L–1 gibberellic acid), 0.2% cytokinin (90 mg L–1 kinetin) ...

  3. Asymbiotic seed germination and in vitro propagation of ...

    African Journals Online (AJOL)

    Joe Krawczyszyn

    2015-10-13

    Oct 13, 2015 ... Christenson. Plant Growth Regul. 65:381-387. Knudson L (1946). A new nutrient solution for the germination of orchid seed. Am. Orchid Soc. Bull. 14:214-217. Lloyd G, MCCown B (1980). Commercially-feasible micropropagation of mountain laurel, Kalmia latifolia, by use of shoot-tip culture. Int. Plant. Prop.

  4. Phenolic Profiles and Antioxidant Activity of Germinated Legumes

    Directory of Open Access Journals (Sweden)

    Do Tan Khang

    2016-04-01

    Full Text Available Bioactive compounds, which are naturally produced in plants, have been concerned with the food and pharmaceutical industries because of the pharmacological effects on humans. In this study, the individual phenolics of six legumes during germination and antioxidant capacity from sprout extracts were determined. It was found that the phenolic content significantly increased during germination in all legumes. Peanuts showed the strongest antioxidant capacity in both the DPPH• (1,1-diphenyl-2-picrylhydrazyl method and the reducing power assay (32.51% and 84.48%, respectively. A total of 13 phenolic acids were detected and quantified. There were 11 phenolic constituents identified in adzuki beans; 10 in soybeans; 9 in black beans, mung beans, and white cowpeas; and 7 compounds in peanuts. Sinapic acid and cinnamic acid were detected in all six legume sprouts, and their quantities in germinated peanuts were the highest (247.9 µg·g−1 and 62.9 µg·g−1, respectively. The study reveals that, among the investigated legumes, germinated peanuts and soybeans obtained maximum phenolics and antioxidant capacity.

  5. Germination of Several Groundnut Cultivars in Relation to Incidence

    African Journals Online (AJOL)

    Ahmed et al.

    In Nigeria, it has good potential as a legume crop due to its ability to add nitrogen to the ... The germination index (GI) was calculated as number of seedling emerging in .... isolated from all cultivars and this agreed with the work of. Mohammed ...

  6. Studies on seed germination and in vitro shoot multiplication of ...

    African Journals Online (AJOL)

    Yomi

    2011-12-21

    Dec 21, 2011 ... vitro seed germination and plantlet regeneration of this plant. ... medical books, a few varieties of herbs are described ... Seed viability was determined by tetrazolium (TZ) test. (Perry ..... Dictionary of Drugs and Difficult Terms of 'The Book of ... establishment of stem cuttings of oregano, pepermint and balm.

  7. Effect of gibberellic acid and potassium nitrate on seed germination ...

    African Journals Online (AJOL)

    Ramonda serbica and Ramonda nathaliae are rare resurrection plants, endemic and relict species from Balkan Peninsula. The effect of gibberellic acid (GA3) and potassium nitrate (KNO3) were conducted to determine the seed germination response for these two species. An experiment was conducted with four ...

  8. (Cicer arietinum L.) seeds during germination by NMR spectroscopy

    African Journals Online (AJOL)

    Experiments were conducted to characterize the changes in water status during imbibition by nuclear magnetic resonance (NMR) spectroscopy in chickpea seeds exposed to static magnetic fields of 100 mT for 1 h. Water uptake during seed germination showed three phases with rapid initial hydration phase I, followed by ...

  9. Asymbiotic seed germination and in vitro seedling development of ...

    African Journals Online (AJOL)

    STORAGESEVER

    2008-10-20

    Oct 20, 2008 ... (M) and Knudson 'C' (KC) were evaluated for seed germination and early ... running tap water and Teepol. ... blade. The powdery seeds were inoculated on the surface of agar ... an interval of one week to trace different stages of development of .... round in shape and radially symmetrical that turned to.

  10. Aspects of the barley seed proteome during development and germination

    DEFF Research Database (Denmark)

    Finnie, Christine; Maeda, K.; Østergaard, O.

    2004-01-01

    Analysis of the water-soluble barley seed proteome has led to the identification of proteins by MS in the major spots on two-dimensional gels covering the pi ranges 4-7 and 6-11. This provides the basis for in-depth studies of proteome changes during seed development and germination, tissue...

  11. Proteomic analysis of Arabidopsis seed germination and priming

    NARCIS (Netherlands)

    Gallardo, K.; Job, C.; Groot, S.P.C.; Puype, M.; Demol, H.; Vandekerckhove, J.; Job, D.

    2001-01-01

    To better understand seed germination, a complex developmental process, we developed a proteome analysis of the model plant Arabidopsis for which complete genome sequence is now available. Among about 1,300 total seed proteins resolved in two-dimensional gels, changes in the abundance (up- and

  12. Extensive translational regulation during seed germination revealed by polysomal profiling

    NARCIS (Netherlands)

    Bai, Bing; Peviani, Alessia; Horst, van der Sjors; Gamm, Magdalena; Snel, Berend; Bentsink, Leónie; Hanson, Johannes

    2017-01-01

    This work investigates the extent of translational regulation during seed germination. The polysome occupancy of each gene is determined by genome-wide profiling of total mRNA and polysome-associated mRNA. This reveals extensive translational regulation during Arabidopsis thaliana seed

  13. Fast neutron sensitivity of dry and germinating tomato seeds

    NARCIS (Netherlands)

    Contant, R.B.

    1970-01-01

    A study was made of changes in fast neutron effectiveness during the hydration and germination of tomato seeds. The main findings and conclusions are the following,

    Section 3.6

    Samples of unirradiated seeds and their constituent parts (seedcoat+endosperm and embryo) were taken at short

  14. Treatments for improving seed germination in eggplant and related species

    OpenAIRE

    Gisbert, Carmina; Prohens, J.; Nuez, Fernando

    2011-01-01

    7 pages, 2 figures, 1 table, 19 references. Trabajo incluido en el Capítulo: Seed Genetics and Biotechnology, an Seed Germination and Vigour, presentado al Fith International Symposium on Seed, Transplant and Stand Establishment of Horticultural Crops, celebrado del 27/09 al 1/10 de 2009, en Murcia y Almería, España.

  15. Biosynthesis of germination stimulants of parasitic weeds Striga and Orobanche

    NARCIS (Netherlands)

    Sun, Z.

    2008-01-01

    My research focused on the biosynthetic origin of germination stimulants of the root parasitic plants, Striga spp. and Orobanche spp., which have an increasing impact on cereal and other economically important crops in many regions of the world. The traditional control methods are not sufficient and

  16. In vitro germination and growth of babassu (orbygnia phalerata Mart ...

    African Journals Online (AJOL)

    CERRADONLINE

    2012-06-07

    Jun 7, 2012 ... samples were removed from the dry chambers to assess embryo viability using in vitro germination and the tetrazolium test, which was adapted from the method of Ribeiro et al. (2010). The experimental design was completely randomized, fully factorial (3 drying times × 2 drying temperatures) and used 4 ...

  17. Standardization of different media for in vitro pollen germination of ...

    African Journals Online (AJOL)

    Almond is an important nut crop which, mostly for fruit set, needs the pollination of flowers followed by fertilization. Therefore, pollen viability and its germination capability are essential. To optimize the pollen culture medium of almond and standardization of the best medium, the present study was carried out with 48 different ...

  18. Substrate water availability and seed water content on niger germination

    Directory of Open Access Journals (Sweden)

    Carla Regina Baptista Gordin

    2015-09-01

    Full Text Available Niger is an oleaginous species whose cultivation has been spreading, but there is not much information on the adverse conditions during its seedling establishment. This study aimed at evaluating the effects of substrate water availability and seed water content on niger germination. Seeds were moistened using the humid atmosphere method for 0; 24; 48; and 72 hours, obtaining the water contents of 7.0 %, 12.8 %, 16.8 % and 32.2 %. Then, they were sown in substrate moistened with PEG 6000 solutions with different osmotic potentials: 0.0 MPa (control, -0.1 MPa, -0.2 MPa, -0.3 MPa and -0.4 MPa. A completely randomized design, in a 4 x 5 factorial scheme (water content x osmotic potential, with four replications of 50 seeds, was used. First count and germination percentage, germination speed index and mean time, shoot and root length and seedlings dry weight were evaluated. The reduction in the substrate osmotic potential decreases the niger seed germination and seedling growth, regardless of water content, but with a higher evidence in seed water contents below 32.2 % and 12.8 %, respectively.

  19. Germination in vitro embryo of Walnut (Juglans boliviana

    Directory of Open Access Journals (Sweden)

    Pérez-Guzmán Jheanete

    2015-05-01

    Full Text Available Bolivian Juglans is an important forest species found in the rain forests of Bolivia. The seed of this species is recalcitrant with hardened cover, which hinders germination and propagation of the species. The aim of this study was to determine the culture medium for in vitro germination of mature embryos of Bolivian Juglans. Technique initially scarification and disinfection process was determined. Subsequently in vitro culture was performed using the culture medium Woody Plant Medium (WPM with the addition of plant growth regulators (indole butyric acid and 6-benzyl aminopurine in different concentrations. As control WPM, culture medium was used 100%. Response variables evaluated were percentage of contamination and germination; vitroplant length, number of leaves, number of shoots, number of roots per vitroplant, root length and percentage of survival. The plantlets in vitro germination in treatments and the control in the middle l culture WPM supplemented with 0.15 mg / l of IBA and 1.5 mg / l BAP was 90%; other treatments inhibit the growth of the stem and roots of plantlets.

  20. Germination and early seedling growth of Pinus densata Mast. provenances

    Science.gov (United States)

    Yulan Xu; Nianhui Cai; Bin He; Ruili Zhang; Wei Zhao; Jianfeng Mao; Anan Duan; Yue Li; Keith Woeste

    2016-01-01

    We studied seed germination and early seedling growth of Pinus densata to explore the range of variability within the species and to inform afforestation practices. Phenotypes were evaluated at a forest tree nursery under conditions that support Pinus yunnanensis, one of the presumed parental species of P. densata...

  1. Effect of plant growth hormones and abiotic stresses on germination ...

    African Journals Online (AJOL)

    Phosphatases are widely found in plants having intracellular and extracellular activities. Phosphatases are believed to be important for phosphorous scavenging and remobilization in plants, but its role in adaptation to abiotic stresses and growth hormones at germination level has not been critically evaluated. To address ...

  2. Seed germination and seedling establishment of some wild almond ...

    African Journals Online (AJOL)

    In the last experiment, the establishment and vigor of 14 accessions from eight almond species have been evaluated in plastic bags in outdoor conditions. Two ecotypes of Prunus spp. had the highest stem diameter and length at all growing stages. Keywords: Amygdalus, germination percentage, index vigor, root initiation, ...

  3. Differential effects of carbohydrates on arabidopsis pollen germination

    Czech Academy of Sciences Publication Activity Database

    Hirsche, J.; Fernández, J. M. G.; Stabentheiner, E.; Großkinsky, D.K.; Roitsch, Thomas

    2017-01-01

    Roč. 58, č. 4 (2017), s. 691-701 ISSN 0032-0781 R&D Projects: GA MŠk(CZ) LO1415 Institutional support: RVO:67179843 Keywords : Arabidopsis thaliana * Carbohydrates * Metabolic regulation * Pollen germination * Signaling * Structure-function relationship Subject RIV: EF - Botanics OBOR OECD: Cell biology Impact factor: 4.760, year: 2016

  4. Modelling the effect of temperature on seed germination in some ...

    African Journals Online (AJOL)

    USER

    2010-03-01

    Mar 1, 2010 ... utilizes temperature for predicting seed germination and the model can be applied to ... seeds were sprinkled on round filter papers (Watman No. 1) in a 9 cm Petri dish and ..... A review of research on seedbed preparation for ...

  5. Evaluation of drought and salinity stress effects on germination and ...

    African Journals Online (AJOL)

    To study the effect of polyethylene glycol (PEG) and NaCl stress on germination and early seedling stages on two cultivars of maize, two separated experiment were laid out at seed laboratory in Iran in 2011. This investigation was performed as factorial experiment under completely randomized design (CRD) with three ...

  6. Evaluation des conditions de germination des noyaux de Grewia ...

    African Journals Online (AJOL)

    personnel

    31 janv. 2014 ... graines de G.coriacea afin de parvenir à un meilleur taux de germination naturellement médiocre. ... fourchettes) et comme matériau de ...... contre, les chocs thermiques par l'eau .... stockage et de la durée de chauffage.

  7. Influence of plasma treatment on corn germination and early growth

    Czech Academy of Sciences Publication Activity Database

    Šerá, Božena; Špatenka, P.; Šerý, M.; Vrchotová, Naděžda; Hrušková, Iveta

    2010-01-01

    Roč. 38, č. 10 (2010), s. 2963-2968 ISSN 0093-3813 Institutional research plan: CEZ:AV0Z60870520 Keywords : air plasma * germination * microwave discharge * seed Subject RIV: BL - Plasma and Gas Discharge Physics Impact factor: 1.070, year: 2010

  8. Environmental factors for germination of Sclerotinia sclerotiorum sclerotia

    Science.gov (United States)

    Basal stalk rot of sunflower is an economically important and rather unique disease among crops that are susceptible to Sclerotinia sclerotiorum. This disease is the result of myceliogenic germination of sclerotia whereby the vegetative hyphae infect the sunflower below the soil level. In contrast, ...

  9. Relationships Between Fruits And Seed Sizes, Germination And ...

    African Journals Online (AJOL)

    Relationships between fruits and seeds sizes; seed germination and early seedling growth of seedlings of 25 plant species were studied at the University of Agriculture, Umudike, Nigeria. The destruction of Nigeria rainforest without an assured method of naturally regenerating it, has contributed to some edible plant species ...

  10. The allelopathic effects of three crop residues on the germination ...

    African Journals Online (AJOL)

    ... maize inflorescences showed significant differences when compared to the control. No growth was recorded in the radicle until 96 hrs of the experiment in all the extract – treated seeds from the three crop residues while the control germinated at 72 hours. Keywords: Allelopathy, allelochemical, biomolecules, Sphenostylis ...

  11. Secondary Metabolites Produced during the Germination of Streptomyces coelicolor

    Czech Academy of Sciences Publication Activity Database

    Čihák, M.; Kameník, Zdeněk; Šmídová, Klára; Bergman, N.; Benada, Oldřich; Kofroňová, Olga; Petříčková, Kateřina; Bobek, Jan

    2017-01-01

    Roč. 8, DEC 13 (2017), č. článku 2495. ISSN 1664-302X R&D Projects: GA MŠk(CZ) LO1509; GA MŠk(CZ) LM2015055 Institutional support: RVO:61388971 Keywords : spore germination * Streptomyces * cell signaling Subject RIV: EE - Microbiology, Virology OBOR OECD: Microbiology Impact factor: 4.076, year: 2016

  12. Germination at low osmotic potential as a selection criteria for ...

    African Journals Online (AJOL)

    user

    2014-01-08

    Jan 8, 2014 ... 1Department of Crop Science, Faculty of Agriculture, Universiti Putra Malaysia, 43400 UPM Serdang, Selangor,. Malaysia. .... papers at 26°C. The germination data were recorded daily. ... (D) and D is the number of counted days from the beginning of ... USA, SAS (r) Proprietary Software 9.2 (TS1M0)).

  13. Sugar signalling during germination and early seedling establishment in Arabidopsis

    NARCIS (Netherlands)

    Dekkers, S.J.W.

    2006-01-01

    Sugars have pronounced effects on many plant processes like gene expression, germination and early seedling development. Several screens for sugar insensitive mutants were performed to identify genes involved in sugar response pathways using the model plant Arabidopsis. These include sun, gin and

  14. The role of seed priming in improving seed germination and ...

    African Journals Online (AJOL)

    win7

    2013-11-13

    Nov 13, 2013 ... As a result, fresh and dry weights of shoot and root were improved. Seed priming alleviated the inhibitory effect of salt stress on germination and seedling growth of maize under salt stress. ... Salinization is more spreading in irrigated lands because of inappropriate management of irrigation and drainage.

  15. The maturation and germination of Phytophthora ramorum Chlamydospores

    Science.gov (United States)

    Aaron L. Smith; Everett M. Hansen

    2008-01-01

    Chlamydospores are a distinctive feature of Phytophthora ramorum. They are formed quickly in agar, and within colonized leaves. We followed their development and maturation in vitro and in vivo, and studied conditions affecting their germination. Cell walls of mature P. ramorum chlamydospores...

  16. Assessment on the effects of potting mixtures on germination and ...

    African Journals Online (AJOL)

    Seeds of M. oleifera(Lam) tested for viability by floatation method were planted in different soil Media and replicated three times. The experiment was arranged in a Completely Randomized Design and watering was carried in all the treatments daily. The germination and growth of the seedlings were assessed for twelve ...

  17. Ethanol exposure can inhibit red spruce ( Picea rubens ) seed germination

    Science.gov (United States)

    John R. Butnor; Brittany M. Verrico; Victor Vankus; Stephen R. Keller

    2018-01-01

    Flotation of seeds in solvents is a common means of separating unfilled and filled seeds. While a few protocols for processing red spruce (Picea rubens) seeds recommend ethanol flotation, delayed and reduced germination have been reported. We conducted an ethanol bioassay on seeds previously stored at -20°C to quantify the concentration required to separate red spruce...

  18. Salt stress induced changes in germination, lipid peroxidation and ...

    African Journals Online (AJOL)

    Final germination percentage (FG%) decreased with increasing salinity in GL, Paris Island cos and Isadora varieties, and was annulated at the highest salt concentration in GL, the most sensitive variety. However, in the less sensitive, KS, FG% was decreased by 60% compared to the control at 200 mM. KS and GL varieties ...

  19. Effects of thermal treatments and germination on physico-chemical ...

    African Journals Online (AJOL)

    Certain physico-chemical properties including viscoelasticity, crystallinity and maltose content of corn depends on the gelatinization of starch under different treatments. Three different treatments were performed; boiling in water, steam heating, and germination. The effects of gelatinization on viscoelastic property of corn ...

  20. Rapid identification of lettuce seed germination mutants by bulked segregant analysis and whole genome sequencing.

    Science.gov (United States)

    Huo, Heqiang; Henry, Isabelle M; Coppoolse, Eric R; Verhoef-Post, Miriam; Schut, Johan W; de Rooij, Han; Vogelaar, Aat; Joosen, Ronny V L; Woudenberg, Leo; Comai, Luca; Bradford, Kent J

    2016-11-01

    Lettuce (Lactuca sativa) seeds exhibit thermoinhibition, or failure to complete germination when imbibed at warm temperatures. Chemical mutagenesis was employed to develop lettuce lines that exhibit germination thermotolerance. Two independent thermotolerant lettuce seed mutant lines, TG01 and TG10, were generated through ethyl methanesulfonate mutagenesis. Genetic and physiological analyses indicated that these two mutations were allelic and recessive. To identify the causal gene(s), we applied bulked segregant analysis by whole genome sequencing. For each mutant, bulked DNA samples of segregating thermotolerant (mutant) seeds were sequenced and analyzed for homozygous single-nucleotide polymorphisms. Two independent candidate mutations were identified at different physical positions in the zeaxanthin epoxidase gene (ABSCISIC ACID DEFICIENT 1/ZEAXANTHIN EPOXIDASE, or ABA1/ZEP) in TG01 and TG10. The mutation in TG01 caused an amino acid replacement, whereas the mutation in TG10 resulted in alternative mRNA splicing. Endogenous abscisic acid contents were reduced in both mutants, and expression of the ABA1 gene from wild-type lettuce under its own promoter fully complemented the TG01 mutant. Conventional genetic mapping confirmed that the causal mutations were located near the ZEP/ABA1 gene, but the bulked segregant whole genome sequencing approach more efficiently identified the specific gene responsible for the phenotype. © 2016 The Authors The Plant Journal © 2016 John Wiley & Sons Ltd.

  1. Phospholipase Cδ regulates germination of Dictyostelium spores

    NARCIS (Netherlands)

    Dijken, Peter van; Haastert, Peter J.M. van

    2001-01-01

    Background: Many eukaryotes, including plants and fungi make spores that resist severe environmental stress. The micro-organism Dictyostelium contains a single phospholipase C gene (PLC); deletion of the gene has no effect on growth, cell movement and differentiation. In this report we show that PLC

  2. Seed germination in Miconia theaezans (Bonpl. Cogniaux (Melastomataceae

    Directory of Open Access Journals (Sweden)

    Simone Godoi

    2007-07-01

    Full Text Available The effects of light and temperature were studied on the seeds of Miconia theazeans by isothermic and alternating temperature incubations. The optimum temperature for seed germination was determined by final percentage and germination rates as located in the range of 27.5 to 30 °C and by germination kinetics at the range of 19.5 to 30 °C. The germination was dependent on diffusion processes. The minimum and maximum temperatures were 12.5-15°C and 32.5-35°C, respectively. The seeds showed strong light dependence for germination with the necessity of daily 4-6 h white light irradiation for the maximum induction of germination. However, under 30-20 °C alternating temperatures, daily 2 hours white light was enough to induce germination and attained maximum under 4 h photoperiod. The results indicated that M. theazeans presented characteristics of early successional species.O efeito da luz e da temperatura na germinação de sementes de Miconia theazeans foi analisado através de incubações isotérmicas e de alternâncias de temperaturas. Através das porcentagens finais e velocidade de germinação concluímos que a temperatura ótima de germinação localizaram-se entre 27,5 e 30 °C e pela cinética de germinação verificamos que entre 19,5 e 30 °C a germinação é dependente de processos de difusão. As temperaturas mínima e máxima foram de 12,5-15 °C e 32,5-35 °C, respectivamente. As sementes apresentaram forte dependência da presença de luz branca para a indução da germinação com a necessidade de 4-6 horas de luz diária para a máxima indução do processo. Entretanto, com a alternância de temperaturas de 30 e 20 °C, fotoperíodo de 2 horas foi suficiente para a indução da germinação sendo o máximo de indução obtida a partir de 4 horas diárias. Estes resultados indicam que Miconia theazeans é uma espécie importante que coloniza clareiras e áreas perturbadas em uma floresta natural.

  3. Polymorphism in Bacterial Flagella Suspensions

    Science.gov (United States)

    Schwenger, Walter J.

    Bacterial flagella are a type of biological polymer studied for its role in bacterial motility and the polymorphic transitions undertaken to facilitate the run and tumble behavior. The naturally rigid, helical shape of flagella gives rise to novel colloidal dynamics and material properties. This thesis studies methods in which the shape of bacterial flagella can be controlled using in vitro methods and the changes the shape of the flagella have on both single particle dynamics and bulk material properties. We observe individual flagellum in both the dilute and semidilute regimes to observe the effects of solvent condition on the shape of the filament as well as the effect the filament morphology has on reptation through a network of flagella. In addition, we present rheological measurements showing how the shape of filaments effects the bulk material properties of flagellar suspensions. We find that the individual particle dynamics in suspensions of flagella can vary with geometry from needing to reptate linearly via rotation for helical filaments to the prevention of long range diffusion for block copolymer filaments. Similarly, for bulk material properties of flagella suspensions, helical geometries show a dramatic enhancement in elasticity over straight filaments while block copolymers form an elastic gel without the aid of crosslinking agents.

  4. Vertical zonation and seed germination indices of chromium resistant cellulolytic and nitrogen fixing bacteria from a chronically metal exposed land area

    International Nuclear Information System (INIS)

    Aslam, S.; Qazi, J.I.

    2014-01-01

    Twenty eight cellulolytic and 25 nitrogen fixing bacteria were isolated from 20, 40 and 60 cm depths of the chromium contaminated land area. The cellulolytic as well as nitrogen fixing microbial communities in soil profiles were dominated by genus Bacillus. More diverse nitrogen fixing bacterial isolates belonging to different genera Paenibacillus, Corynebacterium and Pseudomonas were observed as compared to cellulolytic bacterial community. Majority of the cellulolytic bacteria were found inhabitants of 20 cm soil layer while 40 cm depth was the preferred zone for the nitrogen fixing bacteria. Screening of the bacterial isolates for chromium resistance showed that isolates designated as ASK15 and ASK16 were able to resist up to 1800 mg/l of chromium while the nitrogen fixing isolates which offered a maximum resistant level up to 1650 mg/l of chromium were ASNt10 and ASNS13. Nitrogen fixing isolates enhanced seed germination by 33% and expressed efficient nitrogenase activity up to 0.80 (C/sub 2/H/sub 2/ nmol/ml/hr). Growth promoting assay proved ASNt10 a potential isolate which produced 90 meu g/ml of indoleacetic acid (IAA). Though cellulolytic isolates did not affect seed germination, a significant influence on root length similar to that of ASNt10 and ASNS13 with nearly 5-fold increase in comparison with uninoculated control was observed. The isolates ASK15, ASK16 were identified as Bacillus cereus while ASNt10 and ASNS13 as Paenibacillus barcinonensis and Bacillus megaterium, respectively. (author)

  5. Prevention of bacterial adhesion

    DEFF Research Database (Denmark)

    Klemm, Per; Vejborg, Rebecca Munk; Hancock, Viktoria

    2010-01-01

    . As such, adhesion represents the Achilles heel of crucial pathogenic functions. It follows that interference with adhesion can reduce bacterial virulence. Here, we illustrate this important topic with examples of techniques being developed that can inhibit bacterial adhesion. Some of these will become...

  6. Cellular recycling of proteins in seed dormancy alleviation and germination

    Directory of Open Access Journals (Sweden)

    Krystyna Oracz

    2016-07-01

    Full Text Available Each step of the seed-to-seed cycle of plant development including seed germination is characterized by a specific set of proteins. The continual renewal and/or replacement of these biomolecules are crucial for optimal plant adaptation. As proteins are the main effectors inside the cells, their levels need to be tightly regulated. This is partially achieved by specific proteolytic pathways via multicatalytic protease complexes defined as 20S and 26S proteasomes. In plants, the 20S proteasome is responsible for degradation of carbonylated proteins, while the 26S being a part of ubiquitin-proteasome pathway (UPP is known to be involved in proteolysis of phytohormone signaling regulators. On the other hand, the role of translational control of plant development is also well documented, especially in the context of pollen tube growth and light signaling. Despite the current progress that has been made in seed biology, the sequence of cellular events that determine if the seed can germinate or not are still far from complete understanding. The role and mechanisms of regulation of proteome composition during processes occurring in the plant’s photosynthetic tissues have been well characterized since many years, but in nonphotosynthetic seeds it has emerged as a tempting research task only since the last decade. This review discusses the recent discoveries providing insights into the role of protein turnover in seed dormancy alleviation, and germination, with a focus on the control of translation and proteasomal proteolysis. The presented novel data of translatome profiling in seeds highlighted that post-transcriptional regulation of germination results from a timely regulated initiation of translation. In addition, the importance of 26S proteasome in the degradation of regulatory elements of cellular signaling and that of the 20S complex in proteolysis of specific carbonylated proteins in hormonal- and light-dependent processes occurring in seeds is

  7. The Bacterial Sequential Markov Coalescent.

    Science.gov (United States)

    De Maio, Nicola; Wilson, Daniel J

    2017-05-01

    Bacteria can exchange and acquire new genetic material from other organisms directly and via the environment. This process, known as bacterial recombination, has a strong impact on the evolution of bacteria, for example, leading to the spread of antibiotic resistance across clades and species, and to the avoidance of clonal interference. Recombination hinders phylogenetic and transmission inference because it creates patterns of substitutions (homoplasies) inconsistent with the hypothesis of a single evolutionary tree. Bacterial recombination is typically modeled as statistically akin to gene conversion in eukaryotes, i.e. , using the coalescent with gene conversion (CGC). However, this model can be very computationally demanding as it needs to account for the correlations of evolutionary histories of even distant loci. So, with the increasing popularity of whole genome sequencing, the need has emerged for a faster approach to model and simulate bacterial genome evolution. We present a new model that approximates the coalescent with gene conversion: the bacterial sequential Markov coalescent (BSMC). Our approach is based on a similar idea to the sequential Markov coalescent (SMC)-an approximation of the coalescent with crossover recombination. However, bacterial recombination poses hurdles to a sequential Markov approximation, as it leads to strong correlations and linkage disequilibrium across very distant sites in the genome. Our BSMC overcomes these difficulties, and shows a considerable reduction in computational demand compared to the exact CGC, and very similar patterns in simulated data. We implemented our BSMC model within new simulation software FastSimBac. In addition to the decreased computational demand compared to previous bacterial genome evolution simulators, FastSimBac provides more general options for evolutionary scenarios, allowing population structure with migration, speciation, population size changes, and recombination hotspots. FastSimBac is

  8. Changes in vicine, con vicine and oligosaccharides contents during germination of broad bean

    International Nuclear Information System (INIS)

    Al-Kaisey, T. M.; Al-Hadithi, R. T.; Sahead, A. B.

    1997-01-01

    Seeds of three cultivars of broad beans were subjected to germination at 25 deg. for 24, 48 and 72 hours. Also, three sets of experiments were germinated for 48 hour se and each one was subjected to different concentrations of gibberellin (100), 200 ppm) as growth regulator. Significant levels of variation were found in the contents of vicine and con vicine during seeds germination. Meanwhile, a complete disappearance of raffinose, scythe's and verbascose (the flatus factors in broad beans) were observed. No significant differences were found in the non-flatulent sugars, protein, ash and oil in the un germinated and germinated seed. (authors). 19 refs., 3 tabs

  9. Bacterial fatty acid metabolism in modern antibiotic discovery.

    Science.gov (United States)

    Yao, Jiangwei; Rock, Charles O

    2017-11-01

    Bacterial fatty acid synthesis is essential for many pathogens and different from the mammalian counterpart. These features make bacterial fatty acid synthesis a desirable target for antibiotic discovery. The structural divergence of the conserved enzymes and the presence of different isozymes catalyzing the same reactions in the pathway make bacterial fatty acid synthesis a narrow spectrum target rather than the traditional broad spectrum target. Furthermore, bacterial fatty acid synthesis inhibitors are single-targeting, rather than multi-targeting like traditional monotherapeutic, broad-spectrum antibiotics. The single-targeting nature of bacterial fatty acid synthesis inhibitors makes overcoming fast-developing, target-based resistance a necessary consideration for antibiotic development. Target-based resistance can be overcome through multi-targeting inhibitors, a cocktail of single-targeting inhibitors, or by making the single targeting inhibitor sufficiently high affinity through a pathogen selective approach such that target-based mutants are still susceptible to therapeutic concentrations of drug. Many of the pathogens requiring new antibiotic treatment options encode for essential bacterial fatty acid synthesis enzymes. This review will evaluate the most promising targets in bacterial fatty acid metabolism for antibiotic therapeutics development and review the potential and challenges in advancing each of these targets to the clinic and circumventing target-based resistance. This article is part of a Special Issue entitled: Bacterial Lipids edited by Russell E. Bishop. Copyright © 2016 Elsevier B.V. All rights reserved.

  10. Proteomic Analysis of Lettuce Seed Germination and Thermoinhibition by Sampling of Individual Seeds at Germination and Removal of Storage Proteins by Polyethylene Glycol Fractionation1

    Science.gov (United States)

    Song, Bin-Yan; Deng, Zhi-Jun; Wang, Yue; Liu, Shu-Jun; Møller, Ian Max; Song, Song-Quan

    2015-01-01

    Germination and thermoinhibition in lettuce (Lactuca sativa ‘Jianyexianfeng No. 1’) seeds were investigated by a proteomic comparison among dry seeds, germinated seeds at 15°C, at 15°C after imbibition at 25°C for 48 h, or at 25°C in KNO3 (all sampled individually at germination), and ungerminated seeds at 25°C, a thermoinhibitory temperature. Before two-dimensional gel electrophoresis analysis, storage proteins (greater than 50% of total extractable protein) were removed by polyethylene glycol precipitation, which significantly improved the detection of less abundant proteins on two-dimensional gels. A total of 108 protein spots were identified to change more than 2-fold (P lettuce seed germination and thermoinhibition. Accumulation of three proteins and expression of five genes participating in the mevalonate (MVA) pathway of isoprenoid biosynthesis correlated positively with seed germinability. Inhibition of this pathway by lovastatin delayed seed germination and increased the sensitivity of germination to abscisic acid. MVA pathway-derived products, cytokinins, partially reversed the lovastatin inhibition of germination and released seed thermoinhibition at 25°C. We conclude that the MVA pathway for isoprenoid biosynthesis is involved in lettuce seed germination and thermoinhibition. PMID:25736209

  11. Proteomic analysis of lettuce seed germination and thermoinhibition by sampling of individual seeds at germination and removal of storage proteins by polyethylene glycol fractionation.

    Science.gov (United States)

    Wang, Wei-Qing; Song, Bin-Yan; Deng, Zhi-Jun; Wang, Yue; Liu, Shu-Jun; Møller, Ian Max; Song, Song-Quan

    2015-04-01

    Germination and thermoinhibition in lettuce (Lactuca sativa 'Jianyexianfeng No. 1') seeds were investigated by a proteomic comparison among dry seeds, germinated seeds at 15°C, at 15°C after imbibition at 25°C for 48 h, or at 25°C in KNO3 (all sampled individually at germination), and ungerminated seeds at 25°C, a thermoinhibitory temperature. Before two-dimensional gel electrophoresis analysis, storage proteins (greater than 50% of total extractable protein) were removed by polyethylene glycol precipitation, which significantly improved the detection of less abundant proteins on two-dimensional gels. A total of 108 protein spots were identified to change more than 2-fold (Pseeds than in ungerminated 25°C seeds. Gene expression of 12 of those proteins correlated well with the protein accumulation. Methionine metabolism, ethylene production, lipid mobilization, cell elongation, and detoxification of aldehydes were revealed to be potentially related to lettuce seed germination and thermoinhibition. Accumulation of three proteins and expression of five genes participating in the mevalonate (MVA) pathway of isoprenoid biosynthesis correlated positively with seed germinability. Inhibition of this pathway by lovastatin delayed seed germination and increased the sensitivity of germination to abscisic acid. MVA pathway-derived products, cytokinins, partially reversed the lovastatin inhibition of germination and released seed thermoinhibition at 25°C. We conclude that the MVA pathway for isoprenoid biosynthesis is involved in lettuce seed germination and thermoinhibition. © 2015 American Society of Plant Biologists. All Rights Reserved.

  12. Optimizing soaking and germination conditions to improve gamma-aminobutyric acid content in japonica and indica germinated brown rice

    NARCIS (Netherlands)

    Zhang, Q.; Xiang, J.; Zhang, L.; Zhu, X.; Evers, J.B.; Werf, van der W.; Duan, L.

    2014-01-01

    Germinated brown rice is a well-known functional food due to its high content of gamma-aminobutyric acid (GABA). This study was designed to test the difference of producing GABA in two domesticated rice genotypes (indica and japonica rice), and the effects of adding exogenous glutamic acid or

  13. Reduced triacylglycerol mobilization during seed germination and early seedling growth in Arabidopsis containing nutritionally important polyunsaturated fatty acids

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    Pushkar Shrestha

    2016-09-01

    Full Text Available There are now several examples of plant species engineered to synthesise and accumulate nutritionally important polyunsaturated fatty acids in their seed triacylglycerols (TAG. The utilization of such TAG in germinating seeds of such transgenic plants was unknown. In this study, we examined the TAG utilization efficiency during seed germination in transgenic Arabidopsis seeds containing several examples of these fatty acids. Seed TAG species with native fatty acids had higher utilization rate than the TAG species containing transgenically produced polyunsaturated fatty acids. Conversely, quantification of the fatty acid components remaining in the total TAG after early stages of seed germination revealed that the undigested TAGs tended to contain an elevated level of the engineered polyunsaturated fatty acids (PUFA. LC-MS analysis further revealed asymmetrical mobilization rates for the individual TAG species. TAGs which contained multiple PUFA fatty acids were mobilized slower than the species containing single PUFA. The mobilised engineered fatty acids were used in de novo membrane lipid synthesis during seedling development.

  14. Natural variation in germination responses of Arabidopsis to seasonal cues and their associated physiological mechanisms

    Science.gov (United States)

    Barua, Deepak; Butler, Colleen; Tisdale, Tracy E.; Donohue, Kathleen

    2012-01-01

    Background and Aims Despite the intense interest in phenological adaptation to environmental change, the fundamental character of natural variation in germination is almost entirely unknown. Specifically, it is not known whether different genotypes within a species are germination specialists to particular conditions, nor is it known what physiological mechanisms of germination regulation vary in natural populations and how they are associated with responses to particular environmental factors. Methods We used a set of recombinant inbred genotypes of Arabidopsis thaliana, in which linkage disequilibrium has been disrupted over seven generations, to test for genetic variation and covariation in germination responses to distinct environmental factors. We then examined physiological mechanisms associated with those responses, including seed-coat permeability and sensitivity to the phytohormones gibberellic acid (GA) and abscisic acid (ABA). Key Results Genetic variation for germination was environment-dependent, but no evidence for specialization of germination to different conditions was found. Hormonal sensitivities also exhibited significant genetic variation, but seed-coat properties did not. GA sensitivity was associated with germination responses to multiple environmental factors, but seed-coat permeability and ABA sensitivity were associated with specific germination responses, suggesting that an evolutionary change in GA sensitivity could affect germination in multiple environments, but that of ABA sensitivity may affect germination under more restricted conditions. Conclusions The physiological mechanisms of germination responses to specific environmental factors therefore can influence the ability to adapt to diverse seasonal environments encountered during colonization of new habitats or with future predicted climate change. PMID:22012958

  15. Observations on the germination of three species of Citharexylum Jacq. used for ecological restoration

    International Nuclear Information System (INIS)

    Perez Suarez, Bibiana

    2011-01-01

    High-quality plant material is needed to allow the development of large-scale projects in ecological restoration. For this reason, three native species from the Andean forest were prioritized to study their germination: Citharexylum montanum, Citharexylum sulcatum and Citharexylum subflavescens. Pyrenes of these species were subjected to different pre-germination methods such as: scarification and hydration, hydration for 96 hours and hydration for 72 hours respectively for each species mentioned.The total percentage of germination, day of initiation of germination and mean germination time (MGT) were assessed for each species. As a result, total germination percentage was low for all species; C. subflavescens was the species that presented the highest value (41.3%). Only the treatment of scarification and hydration applied to C. montanum favored the germination percentage. The fastest time for germination initiation was 20 days for the species C. subflavescens and C. montanum. Due to the fact that the three species showed heterogeneous germination, the mean germination time (MGT) was high for all species. The observations suggest that physical scarification prior to hydration promotes both the percentage and the day of initiation of germination in Citharexylum.

  16. Effects of salinity, temperature, light and dormancy regulating chemicals on seed germination of salsola drummondii ulbr

    International Nuclear Information System (INIS)

    Rasheed, A.; Hameed, A.; Khan, M.A.; Gul, B.

    2015-01-01

    Salsola drummondii Ulbr. is a perennial halophyte found in salt deserts of southern Balochistan, Pakistan. Experiments were conducted to study the effects of salinity (0, 200, 400, 600, 800 and 1000 mM NaCl), thermoperiod (10/20, 15/25, 20/30 and 25/35 degree C), light (12-h photoperiod and dark) and dormancy regulating chemicals (DRCs) on germination, recovery and viability of the seeds of S. drummondii. Seeds of S. drummondii germinated quickly in distilled water at different temperature regimes and increases in salinity decreased seed germination. Interestingly, few seeds could even germinate in 1000 mM NaCl treatment, which is about twice as high as seawater salinity. Seeds were partially photoblastic and showed relatively higher germination under 12-h photoperiod than in dark. Seeds showed poor recovery of germination from salinity and particularly when germinated in dark. Germination inhibition at high salinity (800 mM NaCl) under 12-h photoperiod was partially alleviated by the exogenous application of different DRCs, particularly fusicoccin. Moreover, all the DRCs, except GA4+7, ameliorated germination of salt stressed seeds under complete darkness and GA4 and fusicoccin were most effective. Our study shows that seeds of S. drummondii are highly tolerant to salinity and variation in temperature but partially photoblastic nature indicate that seeds will not germinate if buried under the soil. Seed germination under saline conditions can be improved by the use of DRCs particularly by application of fusicoccin. (author)

  17. Maternal habitat affects germination requirements of Anabasis setifera, a succulent shrub of the Arabian deserts

    Directory of Open Access Journals (Sweden)

    Ali El-Keblawy

    2016-03-01

    Full Text Available The effects of maternal habitat on light and temperature requirements during germination were assessed for the succulent desert shrub Anabasis setifera. Seeds were collected from the Mediterranean habitats of Egypt and the hyper-arid subtropical habitats of the United Arab Emirates (UAE. Seeds from the two populations were germinated in three temperature treatments in both a light/dark regime and continuous darkness. Seeds from the Egyptian population germinated significantly greater and faster than those of UAE. Seeds stored for four months at room temperatures have little dormancy and germinate at wide range of temperatures and light conditions, but seeds stored four months in the natural habitat lost their ability to germinate and rotted 10 days after incubation. The germination response to temperature depended on the habitat type. Seeds of the Egyptian population attained a significantly greater germination at lower temperatures, compared with seeds from the UAE population, but there was no difference in germination between the two populations at higher temperatures. Germination of A. setifera was very fast; most seeds germinated within four days. These results reflect the adaptive strategy of germination in both populations, and may help explain the wide distribution of this species in different climatic regions.

  18. Effect of Salinity on Germination and Seedling Growth of Four Medicinal Plants

    Directory of Open Access Journals (Sweden)

    A Dadkhah

    2012-07-01

    Full Text Available This experiment was conducted in germinator in order to study the effects of water potential on seed germination, rate of germination and seedlings growth of four medicinal plants (Coriandrum sativum, Plantago psyllium, Discorinia sophia and Portulaca oleracea. Four water potential inclouding distilled water as control (0, -0.37, -0.59 and –0.81 Mpa which made by different salts (NaCl, CaCl2 and NaCl+CaCl2 in 5 to 1 molar ratio. The experiment was carried out based on completly randomized design with six replications. Results showed that the effects of water potential, type of salt on germination percentage, rate of germination, root and shoot length were significant. With decreasing water potential, germination percentage and rate of germination declined but the response of plant were differ. Germination of Portulaca oleracea was not affected by decreasing water potential where as other significantly decreased. The effect of salt composition was significant on rate and percentage germination. The percentage of germination at lower water potential (–0.37 MPa which made by NaCl + CaCl2 significantly was higher than the same water potential made by only NaCl and CaCl2. Although, percentage and rate germination of Portulaca oleracea were not affected by different water potential, seedling growth of Portulaca oleracea significantly decreased.

  19. Environmental and genetic effects on tomato seed metabolic balance and its association with germination vigor.

    Science.gov (United States)

    Rosental, Leah; Perelman, Adi; Nevo, Noa; Toubiana, David; Samani, Talya; Batushansky, Albert; Sikron, Noga; Saranga, Yehoshua; Fait, Aaron

    2016-12-19

    The metabolite content of a seed and its ability to germinate are determined by genetic makeup and environmental effects during development. The interaction between genetics, environment and seed metabolism and germination was studied in 72 tomato homozygous introgression lines (IL) derived from Solanum pennelli and S. esculentum M82 cultivar. Plants were grown in the field under saline and fresh water irrigation during two consecutive seasons, and collected seeds were subjected to morphological analysis, gas chromatograph-mass spectrometry (GC-MS) metabolic profiling and germination tests. Seed weight was under tight genetic regulation, but it was not related to germination vigor. Salinity significantly reduced seed number but had little influence on seed metabolites, affecting only 1% of the statistical comparisons. The metabolites negatively correlated to germination were simple sugars and most amino acids, while positive correlations were found for several organic acids and the N metabolites urea and dopamine. Germination tests identified putative loci for improved germination as compared to M82 and in response to salinity, which were also characterized by defined metabolic changes in the seed. An integrative analysis of the metabolite and germination data revealed metabolite levels unambiguously associated with germination percentage and rate, mostly conserved in the different tested seed development environments. Such consistent relations suggest the potential for developing a method of germination vigor prediction by metabolic profiling, as well as add to our understanding of the importance of primary metabolic processes in germination.

  20. Seed after-ripening and dormancy determine adult life history independently of germination timing.

    Science.gov (United States)

    de Casas, Rafael Rubio; Kovach, Katherine; Dittmar, Emily; Barua, Deepak; Barco, Brenden; Donohue, Kathleen

    2012-05-01

    • Seed dormancy can affect life history through its effects on germination time. Here, we investigate its influence on life history beyond the timing of germination. • We used the response of Arabidopsis thaliana to chilling at the germination and flowering stages to test the following: how seed dormancy affects germination responses to the environment; whether variation in dormancy affects adult phenology independently of germination time; and whether environmental cues experienced by dormant seeds have an effect on adult life history. • Dormancy conditioned the germination response to low temperatures, such that prolonged periods of chilling induced dormancy in nondormant seeds, but stimulated germination in dormant seeds. The alleviation of dormancy through after-ripening was associated with earlier flowering, independent of germination date. Experimental dormancy manipulations showed that prolonged chilling at the seed stage always induced earlier flowering, regardless of seed dormancy. Surprisingly, this effect of seed chilling on flowering time was observed even when low temperatures did not induce germination. • In summary, seed dormancy influences flowering time and hence life history independent of its effects on germination timing. We conclude that the seed stage has a pronounced effect on life history, the influence of which goes well beyond the timing of germination. © 2012 The Authors. New Phytologist © 2012 New Phytologist Trust.

  1. Sweet passion fruit (Passiflora alata Curtis germination: Phases and effect of plant growth regulator

    Directory of Open Access Journals (Sweden)

    Sheila Zambello de Pinho

    2008-09-01

    Full Text Available This work aimed to characterize Passiflora alata germination phases and evaluate the effects of GA3 and GA4+7, associated with phenylmethylaminepurine, on P. alata seed germination. Two experiments were conducted. In the first, two treatments were carried out: seeds submerged in distilled water in a Becker and seeds conditioned in containers on filter paper soaked in distilled water; five replications of 25 seeds were used. The moisture level and the percentage of germination (%G were evaluated. In the second, six treatments and five replications of 25 seeds for each regulator were used. The seeds were imbibed in 0, 50, 100, 150, 200 and 250mg.L-1 of GA3 and GA4+7, associated with to phenylmethylaminepurine, for 11 hours. The seeds were sown in black containers and deposited in to the germination chamber. The numbers of germinated and dormant seeds were evaluated daily. The percentage of germination, the percentage of dormant seeds, and the mean germination time (TMG were estimated. Significant differences in the germination phases between the methods were verified. The germination was affected by the regulators with an increase in the percentage of germination and a reduction in the mean germination time. The highest values were observed with 250mg.L-1 of GA4+7 plus phenylmethylaminepurine.

  2. Secondary metabolites profiles and antioxidant activities of germinated brown and red rice

    Science.gov (United States)

    Nurnaistia, Y.; Aisyah, S.; Munawaroh, H. S. H.; Zackiyah

    2018-05-01

    The research aims to investigate the effect of germination on the secondary metabolite profiles and antioxidant activity of brown and red rice. The germination was performed by using a simple laboratory-scale machine that was designed and optimized to provide conditions that support the germination process. The germination was carried out for 2 days in dark conditions at 26°C and 99% humidity. Analysis of the secondary metabolite profile of ungerminated and germinated rice was performed using LC-MS. The antioxidant activities of ungerminated and germinated rice were done by using DPPH method. The results showed that the profiles of secondary metabolites of brown and red rice changed after germination. Some peaks were found to be induced in the germinated rice. However, some peaks were also loss during germination. The antioxidant activity of brown rice was slightly increased due to the germination, from 11.2% to 22.5%. Meanwhile the antioxidant activity of red rice was decreased after germination, from 73.8% to 60.0%.

  3. Germination of native understorey species for revegetation of New South Wales coal mines

    Energy Technology Data Exchange (ETDEWEB)

    Gillespie, M.J.; Bellairs, S.M.; Mulligan, D.R. [University of Queensland, St. Lucia, Qld. (Australia). Dept. of Agriculture and Centre for Mined Land Rehabilitation

    1997-06-01

    This project investigates the suitability of a range of native understorey species for rehabilitation at several coal mines in New South Wales. The germination of seeds from 69 species representing 12 families was tested under controlled laboratory conditions. Germination occurred in all but two of the species tested and 50% germination was exceeded by 29 species. Species of the Mimosaceae, Fabaceae and Proteaceae tended to have above average germination; however species representing other families had variable germination results. A pre-germination heat treatment applied to all of the Acacia species increased germination in some but not all species. Seeds of these understorey species which were used in this trial, are native to the New South Wales coal fields and available commercially or are relatively easy to collect. Glasshouse and field trials are now being undertaken to assess establishment and growth on mine soil, spoil and coal reject materials. 9 refs., 5 figs.

  4. Effects of crude oil pollution on the germination of Zea mays and Capsicum frutescens

    Energy Technology Data Exchange (ETDEWEB)

    Amakiri, J.O.; Onofeghara, F.A.

    1984-01-01

    The effects of crude oil pollution on the germination of Zea mays F7 and F27 and Capsicum frutescens were investigated. Crude oil was found to inhibit the germination of all the seed types used. The rate of germination decreased signficantly with increase in the length of the period of presoaking. The germination percentage of oil-soaked seeds of Zea mays also fell significantly with time. Seeds of Capsicum frutescens are most tolerant of crude oil in their germination response. The seeds were found to retain almost 100% viability after nearly 1 year of presoaking in crude oil. The lag phase preceding the germination of such seeds, however, increased threefold. Germination inhibition is attributed primarily to the physical surface characteristics of soil, which make it function as a physical barrier to water and oxygen. However, crude oil, where it penetrates, may be toxic to the embryos.

  5. Effects of lanthanum and acid rain stress on the bio-sequestration of lanthanum in phytoliths in germinated rice seeds

    Science.gov (United States)

    Si, Yong; Wang, Lihong; Huang, Xiaohua

    2018-01-01

    REEs in the environment can be absorbed by plants and sequestered by plant phytoliths. Acid rain can directly or indirectly affect plant physiological functions. Currently, the effects of REEs and acid rain on phytolith-REEs complex in plants are not yet fully understood. In this study, a high-silicon accumulation crop, rice (Oryza sativa L.), was selected as a representative of plants, and orthogonal experiments were conducted under various levels of lanthanum [La(III)] and pH. The results showed that various La(III) concentrations could significantly improve the efficiency and sequestration of phytolith La(III) in germinated rice seeds. A pH of 4.5 promoted phytolith La(III) sequestration, while a pH of 3.5 inhibited sequestration. Compared with the single treatment with La(III), the combination of La(III) and acid rain inhibited the efficiency and sequestration of phytolith La(III). Correlation analysis showed that the efficiency of phytolith La(III) sequestration had no correlation with the production of phytolith but was closely correlated with the sequestration of phytolith La(III) and the physiological changes of germinated rice seeds. Phytolith morphology was an important factor affecting phytolith La(III) sequestration in germinated rice seeds, and the effect of tubes on sequestration was more significant than that of dumbbells. This study demonstrated that the formation of the phytolith and La(III) complex could be affected by exogenous La(III) and acid rain in germinated rice seeds. PMID:29763463

  6. BIOSECURITY FOR REDUCING OCHRATOXIN A PRODUCTIVITY AND THEIR IMPACT ON GERMINATION AND ULTRASTRUCTURES OF GERMINATED WHEAT GRAINS

    Directory of Open Access Journals (Sweden)

    M.M.

    2012-08-01

    Full Text Available Ochratoxin A (OTA is a secondary metabolite of some fungi that causes very serious problems for plants, animals and humans. Various microorganisms such as bacteria and microscopic fungi have been tested for their abilities to prevent ochratoxin A contamination or detoxify foods. In this study, Saccharomyces cerevisiae and Lactobacillus bulgaricus reduced OTA production by Aspergillus ochraceus to 40.88 µg/ml ( productivity 60.69% and 13.80 µg/ml (productivity 20.48% respectively compared with the control (67.35 µg/ml (productivity 100%. The results clearly indicated that the seed germinibility in the presence of OTA was decreased with increasing concentration, whereas the germinibility was uncompletely ceased at high concentration (67.35 µg/ml of OTA. The maximum amount of germination was observed in control (without OTA treatment and at low concentration (13.80 µg/ml within 4 days. Antioxidant enzymes catalase and peroxidase decreased in germinated grains treated with OTA. Catalase was 18.12 U/ml in grains treated with low concentration (13.80 µg/ml of OTA while at high concentration (67.35 µg/ml, it was 12.23 U/ml compared with the control (20.33 U/ml. On the other hand, peroxidase decreased only in germinated grains treated with high concentration of OTA. The ultrastructural studies indicate that there were dramatic differences between the cells of root system of wheat seedlings of grains treated and untreated with the OTA. Cell ultrastructures of treated grains with OTA showed that the cytoplasmic membrane collapses away from the cell wall. Plasmodesmata threads were appeared in untreated cells but not formed in treated cells.

  7. DEVELOPMENTAL CHANGES IN THE GERMINATION, GROWTH AND CHLOROPHYLLASE ACTIVITY OF VIGNA MUNGO L. USING SEAWEED EXTRACT OF ULVA RETICULATA FORSSKAL.

    OpenAIRE

    Ganapathy Selvam G.; Balamurugan M.; Thinakaran T.; Sivakumar K

    2013-01-01

    The effect of seaweed extract prepared from Ulva reticulata on seed germination, seedling growth and chlorophyllase activity of Vigna mungo L. was studied. 100% germination was recorded in the seeds treated with lower concentration of seaweed extract. The V. mungo seeds soaked with lower concentrations of the seaweed extracts showed higher rates of germination, while the higher concentrations of the extracts inhibited the germination.

  8. ABA, GA(3), and nitrate may control seed germination of Crithmum maritimum (Apiaceae) under saline conditions.

    Science.gov (United States)

    Atia, Abdallah; Debez, Ahmed; Barhoumi, Zouhaier; Smaoui, Abderrazak; Abdelly, Chedly

    2009-08-01

    Impaired germination is common among halophyte seeds exposed to salt stress, partly resulting from the salt-induced reduction of the growth regulator contents in seeds. Thus, the understanding of hormonal regulation during the germination process is a main key: (i) to overcome the mechanisms by which NaCl-salinity inhibit germination; and (ii) to improve the germination of these species when challenged with NaCl. In the present investigation, the effects of ABA, GA(3), NO(-)(3), and NH(+)(4) on the germination of the oilseed halophyte Crithmum maritimum (Apiaceae) were assessed under NaCl-salinity (up to 200 mM NaCl). Seeds were collected from Tabarka rocky coasts (N-W of Tunisia). The exogenous application of GA(3), nitrate (either as NaNO(3) or KNO(3)), and NH(4)Cl enhanced germination under NaCl salinity. The beneficial impact of KNO(3) on germination upon seed exposure to NaCl salinity was rather due to NO(-)(3) than to K(+), since KCl failed to significantly stimulate germination. Under optimal conditions for germination (0 mM NaCl), ABA inhibited germination over time in a dose dependent manner, but KNO(3) completely restored the germination parameters. Under NaCl salinity, the application of fluridone (FLU) an inhibitor of ABA biosynthesis, stimulated substantially seed germination. Taken together, our results point out that NO(-)(3) and GA(3) mitigate the NaCl-induced reduction of seed germination, and that NO(-)(3) counteracts the inhibitory effect of ABA on germination of C. maritimum.

  9. Mechanical Homogenization Increases Bacterial Homogeneity in Sputum

    Science.gov (United States)

    Stokell, Joshua R.; Khan, Ammad

    2014-01-01

    Sputum obtained from patients with cystic fibrosis (CF) is highly viscous and often heterogeneous in bacterial distribution. Adding dithiothreitol (DTT) is the standard method for liquefaction prior to processing sputum for molecular detection assays. To determine if DTT treatment homogenizes the bacterial distribution within sputum, we measured the difference in mean total bacterial abundance and abundance of Burkholderia multivorans between aliquots of DTT-treated sputum samples with and without a mechanical homogenization (MH) step using a high-speed dispersing element. Additionally, we measured the effect of MH on bacterial abundance. We found a significant difference between the mean bacterial abundances in aliquots that were subjected to only DTT treatment and those of the aliquots which included an MH step (all bacteria, P = 0.04; B. multivorans, P = 0.05). There was no significant effect of MH on bacterial abundance in sputum. Although our results are from a single CF patient, they indicate that mechanical homogenization increases the homogeneity of bacteria in sputum. PMID:24759710

  10. A Gompertz regression model for fern spores germination

    Directory of Open Access Journals (Sweden)

    Gabriel y Galán, Jose María

    2015-06-01

    Full Text Available Germination is one of the most important biological processes for both seed and spore plants, also for fungi. At present, mathematical models of germination have been developed in fungi, bryophytes and several plant species. However, ferns are the only group whose germination has never been modelled. In this work we develop a regression model of the germination of fern spores. We have found that for Blechnum serrulatum, Blechnum yungense, Cheilanthes pilosa, Niphidium macbridei and Polypodium feuillei species the Gompertz growth model describe satisfactorily cumulative germination. An important result is that regression parameters are independent of fern species and the model is not affected by intraspecific variation. Our results show that the Gompertz curve represents a general germination model for all the non-green spore leptosporangiate ferns, including in the paper a discussion about the physiological and ecological meaning of the model.La germinación es uno de los procesos biológicos más relevantes tanto para las plantas con esporas, como para las plantas con semillas y los hongos. Hasta el momento, se han desarrollado modelos de germinación para hongos, briofitos y diversas especies de espermatófitos. Los helechos son el único grupo de plantas cuya germinación nunca ha sido modelizada. En este trabajo se desarrolla un modelo de regresión para explicar la germinación de las esporas de helechos. Observamos que para las especies Blechnum serrulatum, Blechnum yungense, Cheilanthes pilosa, Niphidium macbridei y Polypodium feuillei el modelo de crecimiento de Gompertz describe satisfactoriamente la germinación acumulativa. Un importante resultado es que los parámetros de la regresión son independientes de la especie y que el modelo no está afectado por variación intraespecífica. Por lo tanto, los resultados del trabajo muestran que la curva de Gompertz puede representar un modelo general para todos los helechos leptosporangiados

  11. Postviral Complications: Bacterial Pneumonia.

    Science.gov (United States)

    Prasso, Jason E; Deng, Jane C

    2017-03-01

    Secondary bacterial pneumonia after viral respiratory infection remains a significant source of morbidity and mortality. Susceptibility is mediated by a variety of viral and bacterial factors, and complex interactions with the host immune system. Prevention and treatment strategies are limited to influenza vaccination and antibiotics/antivirals respectively. Novel approaches to identifying the individuals with influenza who are at increased risk for secondary bacterial pneumonias are urgently needed. Given the threat of further pandemics and the heightened prevalence of these viruses, more research into the immunologic mechanisms of this disease is warranted with the hope of discovering new potential therapies. Published by Elsevier Inc.

  12. Influence of seed size and ecological factors on the germination and emergence of field bindweed (Convolvulus arvensis)

    OpenAIRE

    Tanveer,A; Tasneem,M; Khaliq,A; Javaid,M.M; Chaudhry,M.N

    2013-01-01

    An understanding of seed germination ecology of weeds can assist in predicting their potential distribution and developing effective management strategies. Influence of environmental factors and seed size on germination and seedling emergence of Convolvulus arvensis (field bindweed) was studied in laboratory and greenhouse conditions. Germination occurred over a wide range of constant temperatures, between 15 and 40 ºC, with optimum germination between 20 and 25 ºC. Time to start germination,...

  13. Effects of germination on chemical composition and antioxidant activity of flaxseed (Linum usitatissimum L) oil

    OpenAIRE

    Herchi, W.; Bahashwan, S.; Sebei, K.; Ben Saleh, H.; Kallel, H.; Boukhchina, S.

    2015-01-01

    The present study was carried out to determine the changes in proximate composition and physicochemical characteristics of flaxseed during germination. Flaxseed was germinated for 4 days and observations were taken every day throughout the study. Changes in the seed reserve and antioxidant activity were determined during germination. The oil content of the cultivar decreased from 35.10 to 27.22%. During the germination period, the total protein content increased to 23.84%. Germinated flaxseed...

  14. Bacterial vaginosis - aftercare

    Science.gov (United States)

    Bacterial vaginosis (BV) is a type of vaginal infection. The vagina normally contains both healthy bacteria and unhealthy bacteria. BV occurs when more unhealthy bacteria grow than healthy bacteria. No one knows ...

  15. Bacterial intermediate filaments

    DEFF Research Database (Denmark)

    Charbon, Godefroid; Cabeen, M.; Jacobs-Wagner, C.

    2009-01-01

    Crescentin, which is the founding member of a rapidly growing family of bacterial cytoskeletal proteins, was previously proposed to resemble eukaryotic intermediate filament (IF) proteins based on structural prediction and in vitro polymerization properties. Here, we demonstrate that crescentin...

  16. Diagnosis of bacterial infection

    African Journals Online (AJOL)

    direct or indirect evidence of a compatible bacterial pathogen. Inflammation may be .... cardinal features (fever, confusion, headache and neck stiffness). .... specificity, inappropriate indications or poor sampling technique may diminish this ...

  17. Environmental filtering drives the shape and breadth of the seed germination niche in coastal plant communities.

    Science.gov (United States)

    Fernández-Pascual, Eduardo; Pérez-Arcoiza, Adrián; Prieto, José Alberto; Díaz, Tomás E

    2017-05-01

    A phylogenetic comparative analysis of the seed germination niche was conducted in coastal plant communities of western Europe. Two hypotheses were tested, that (1) the germination niche shape (i.e. the preference for a set of germination cues as opposed to another) would differ between beaches and cliffs to prevent seedling emergence in the less favourable season (winter and summer, respectively); and (2) the germination niche breadth (i.e. the amplitude of germination cues) would be narrower in the seawards communities, where environmental filtering is stronger. Seeds of 30 specialist species of coastal plant communities were collected in natural populations of northern Spain. Their germination was measured in six laboratory treatments based on field temperatures. Germination niche shape was estimated as the best germination temperature. Germination niche breadth was calculated using Pielou's evenness index. Differences between plant communities in their germination niche shape and breadth were tested using phylogenetic generalized least squares regression (PGLS). Germination niche shape differed between communities, being warm-cued in beaches (best germination temperature = 20 °C) and cold-cued in cliffs (14 °C). Germination niche was narrowest in seawards beaches (Pielou's index = 0·89) and broadest in landwards beaches (0·99). Cliffs had an intermediate germination niche breadth (0·95). The relationship between niche and plant community had a positive phylogenetic signal for shape (Pagel's λ = 0·64) and a negative one for breadth (Pagel's λ = -1·71). Environmental filters shape the germination niche to prevent emergence in the season of highest threat for seedling establishment. The germination niche breadth is narrower in the communities with stronger environmental filters, but only in beaches. This study provides empirical support to a community-level generalization of the hypotheses about the environmental drivers of the germination

  18. Transcriptional regulatory programs underlying barley germination and regulatory functions of Gibberellin and abscisic acid

    Science.gov (United States)

    2011-01-01

    Background Seed germination is a complex multi-stage developmental process, and mainly accomplished through concerted activities of many gene products and biological pathways that are often subjected to strict developmental regulation. Gibberellins (GA) and abscisic acid (ABA) are two key phytohormones regulating seed germination and seedling growth. However, transcriptional regulatory networks underlying seed germination and its associated biological pathways are largely unknown. Results The studies examined transcriptomes of barley representing six distinct and well characterized germination stages and revealed that the transcriptional regulatory program underlying barley germination was composed of early, late, and post-germination phases. Each phase was accompanied with transcriptional up-regulation of distinct biological pathways. Cell wall synthesis and regulatory components including transcription factors, signaling and post-translational modification components were specifically and transiently up-regulated in early germination phase while histone families and many metabolic pathways were up-regulated in late germination phase. Photosynthesis and seed reserve mobilization pathways were up-regulated in post-germination phase. However, stress related pathways and seed storage proteins were suppressed through the entire course of germination. A set of genes were transiently up-regulated within three hours of imbibition, and might play roles in initiating biological pathways involved in seed germination. However, highly abundant transcripts in dry barley and Arabidopsis seeds were significantly conserved. Comparison with transcriptomes of barley aleurone in response to GA and ABA identified three sets of germination responsive genes that were regulated coordinately by GA, antagonistically by ABA, and coordinately by GA but antagonistically by ABA. Major CHO metabolism, cell wall degradation and protein degradation pathways were up-regulated by both GA and seed

  19. An influence of abiotic factors on the germinability of Agrostis species and Poa species

    Directory of Open Access Journals (Sweden)

    Pavel Knot

    2006-01-01

    Full Text Available The objective of this contribution is to interpret the impact of some abiotic factors on the germinability. Primarily was observed the stress that they cause on germinability and also on the energy of other perennial grass caryopsis' germinability. Withal there were considered differences in germinability of some perennial grass species, variances of strains and the influence of today`s seeds dressing technologies, which are used to improve the germination. The light factor has the biggest influence of all factors on germination of Agrostis stolonifera (Penn G-2, Providence, Poa supina (Supranova and Poa pratensis (Julius, Julius PreGerm. All these species had germination evidential higher in the light, than in the dark. With species Poa pratensis (Coctail, Coctail Headstart and Poa annua were not observed any essential variations between the dark and the light variants. Only with Poa annua there were reached noticeably lower values with variant in the light, where was used polyethyleneglycol, than in the dark. The analysis of variance demonstrated, that the biggest influence had the factor of stratification together with the light factor with Agrostis capilaris (Bardot and Agrostis stolonifera Providence. With Poa annua there was established the biggest influence of the light factor together with the factor of the used medium. The factor of stratification noticeably affected only the germination of Agrostis capillaris Bardot. The germination of Agrostis stolonifera Providence, Poa pratensis Cocktail, Cocktail Headstart, Julius and Poa annua was not noticeably affected by stratification. The reaction on the factor of stratification was with Agrostis capillaris Bardot in the dark adverse and in the light minimal. Poa pratensis Julius PreGerm germination was negative in the dark as well as in the light. With Poa supina Supranova it was not the most important factor, but still affected the germination significiantly. The nitrogen nutrition, as the

  20. Transcriptional regulatory programs underlying barley germination and regulatory functions of Gibberellin and abscisic acid

    Directory of Open Access Journals (Sweden)

    Lin Li

    2011-06-01

    Full Text Available Abstract Background Seed germination is a complex multi-stage developmental process, and mainly accomplished through concerted activities of many gene products and biological pathways that are often subjected to strict developmental regulation. Gibberellins (GA and abscisic acid (ABA are two key phytohormones regulating seed germination and seedling growth. However, transcriptional regulatory networks underlying seed germination and its associated biological pathways are largely unknown. Results The studies examined transcriptomes of barley representing six distinct and well characterized germination stages and revealed that the transcriptional regulatory program underlying barley germination was composed of early, late, and post-germination phases. Each phase was accompanied with transcriptional up-regulation of distinct biological pathways. Cell wall synthesis and regulatory components including transcription factors, signaling and post-translational modification components were specifically and transiently up-regulated in early germination phase while histone families and many metabolic pathways were up-regulated in late germination phase. Photosynthesis and seed reserve mobilization pathways were up-regulated in post-germination phase. However, stress related pathways and seed storage proteins were suppressed through the entire course of germination. A set of genes were transiently up-regulated within three hours of imbibition, and might play roles in initiating biological pathways involved in seed germination. However, highly abundant transcripts in dry barley and Arabidopsis seeds were significantly conserved. Comparison with transcriptomes of barley aleurone in response to GA and ABA identified three sets of germination responsive genes that were regulated coordinately by GA, antagonistically by ABA, and coordinately by GA but antagonistically by ABA. Major CHO metabolism, cell wall degradation and protein degradation pathways were up

  1. Onset of cell division in maize germination: action of auxins

    International Nuclear Information System (INIS)

    de Jimenez, E.S.; Baiza, A.; Aguilar, R.

    1987-01-01

    Seed germination implies metabolic reactivation, synthesis of macromolecules and onset of cell division. During maize germination, meristematic tissues of embryos re-initiate cell division asynchronically. Since auxins are known to stimulate cell division, they asked how auxins might regulate cell cycle re-initiation. Embryonic tissues were incubated with and without auxins. A pulse of either 3 H-thymidine or 32 P-ortophosphate was given to the tissues. Mitotic indexes were determined and % of labeled mitotic cells recorded. Results indicated that meristematic cells re-initiate cell division either from G 1 or G 2 phases. Auxin stimulated differentially the cell division process of these cells. 32 P incorporation into cytoplasmic or nucleic histones was measured. Auxins stimulated this incorporation. Active turnover of histone phosphorylation occurred simultaneously to the cell division process. It is suggested that auxins might regulate the cell cycle by phosphorylation-dephosphorylation of histones

  2. The IBO germination quantitative trait locus encodes a phosphatase 2C-related variant with a nonsynonymous amino acid change that interferes with abscisic acid signaling.

    Science.gov (United States)

    Amiguet-Vercher, Amélia; Santuari, Luca; Gonzalez-Guzman, Miguel; Depuydt, Stephen; Rodriguez, Pedro L; Hardtke, Christian S

    2015-02-01

    Natural genetic variation is crucial for adaptability of plants to different environments. Seed dormancy prevents precocious germination in unsuitable conditions and is an adaptation to a major macro-environmental parameter, the seasonal variation in temperature and day length. Here we report the isolation of IBO, a quantitative trait locus (QTL) that governs c. 30% of germination rate variance in an Arabidopsis recombinant inbred line (RIL) population derived from the parental accessions Eilenburg-0 (Eil-0) and Loch Ness-0 (Lc-0). IBO encodes an uncharacterized phosphatase 2C-related protein, but neither the Eil-0 nor the Lc-0 variant, which differ in a single amino acid, have any appreciable phosphatase activity in in vitro assays. However, we found that the amino acid change in the Lc-0 variant of the IBO protein confers reduced germination rate. Moreover, unlike the Eil-0 variant of the protein, the Lc-0 variant can interfere with the activity of the phosphatase 2C ABSCISIC ACID INSENSITIVE 1 in vitro. This suggests that the Lc-0 variant possibly interferes with abscisic acid signaling, a notion that is supported by physiological assays. Thus, we isolated an example of a QTL allele with a nonsynonymous amino acid change that might mediate local adaptation of seed germination timing. © 2014 The Authors. New Phytologist © 2014 New Phytologist Trust.

  3. Seed germination of three species of Fabaceae typical of seasonally dry forest

    Directory of Open Access Journals (Sweden)

    Daniel Meira Arruda

    2015-06-01

    Full Text Available This study evaluates seeds germination of Anadenanthera colubrina, Acacia polyphylla and Bauhinia cheilantha, typical species of deciduous forests. Seeds were submitted to pre-germination treatments and attack of native insects. The seeds of each species were grouped in: seeds scarified with sandpaper; seeds immersed in water heated to 70 °C, seeds with signs of attack by herbivore insects and the control group. The largest proportion of germinated seeds occurred in the first week of incubation and germination peak, ranged from first to third day. All groups of A. polyphylla and B.cheilantha showed high germination rate (> 90%, being reduced only when seeds were attacked by insects (< 25%. Mechanic scarification was efficient in A. polyphylla by enhancing germination to maximum (100% and accelerating germination. A. colubrina showed no difference among groups, and germination rate was lower (< 50%, which was attributed to infestation by fungi, commonly reported in this species and apparently independent of usual hygiene procedures. Finally, except the fungi infestation in A. colubrina, evaluated species were independent of pre-germination treatment to obtain a high rate of germination.

  4. Soybean mother plant exposure to temperature stress and its effect on germination under osmotic stress

    International Nuclear Information System (INIS)

    Khalil, S.K.; Rehman, A.; Khan, A.Z.; Mexal, J.G.; Zubair, M.; Wahab, S.; Khalil, I.H.; Mohammad, F.

    2010-01-01

    High temperature reduces quality of soybean seed developed at different positions on the plant. The objective of this research was to study the quality of seed produced under different temperature regimes located at different position in the canopy. Soybean plants grown in pots were transferred at first pod stage to three growth chambers fixed at 18/10, 25/15 and 32/20 deg. C day/night temperature having 13/11 hrs day/night length. The plants remained in growth chambers until physiological maturity. Seeds harvested from each growth chamber were exposed to osmotic stress having osmotic potential of -0.5 MPa and unstressed control. Both stressed and control treatments were germinated in three growth chambers fixed at 18, 25 and 35 deg. C. Seed developed at lowest temperature (18/10 deg. C day/night) had maximum germination. Germination decreased linearly with increased day/night temperature and lowest germination was recorded at highest temperature of 32/20 deg. C (day/night). Seed developed at bottom position was heaviest and had better germination compared with seed developed at middle and top position. Seed germination was highest at 25 deg. C and took fewer days to 50% germination than 18 and 25 deg. C. Osmotic stress decreased germination and delayed days to 50% germination than control. It can be concluded that optimum temperature for seed development was 18/10 deg. C (day/night) whereas best germination temperature was 25 deg. C. (author)

  5. Seed Hydropriming and Smoke Water Significantly Improve Low-Temperature Germination of Lupinus angustifolius L.

    Directory of Open Access Journals (Sweden)

    Agnieszka Płażek

    2018-03-01

    Full Text Available Seed imbibition under cold temperature is dangerous when dry seeds have relatively low water content. The aim of this study was to investigate germination of 20 lines/cultivars of narrow-leaf lupine at 7 °C (cold and 13 °C (control under the influence of smoke water and following seed hydropriming for 3 h at 20 °C. The efficacy of individual treatments was examined with regard to seed protection during low-temperature germination. Based on seed germination, vigour at cold was evaluated four days after sowing by means of hypocotyl length, the studied lines/cultivars were divided into three groups with low, high and very high germination rates. Germination vigour correlated with cell membrane permeability, dehydrogenase activity and abscisic acid (ABA content and was analysed in the seeds one day after sowing. Gibberellin content did not correlate with germination vigour. The seeds of weakly germinating lines/cultivars had the highest cell permeability and ABA content as well as the lowest amylolytic activity at both studied temperatures. Additionally, the vigour of weakly germinating seeds at 7 °C correlated with dehydrogenase activity. Three-hour hydropriming was the most effective for seed germination under cold due to reduced cell membrane permeability and ABA level. Stimulating effects of smoke water on germination under cold could be explained by enhanced dehydrogenase activity.

  6. Maturation and germination of somatic embryos of Sorghum bicolor (L. Moench cultivar 'CIAP 132R-05'

    Directory of Open Access Journals (Sweden)

    Silvio de J Martínez

    2017-03-01

    Full Text Available In sorghum [Sorghum bicolor (L. Moench], developed protocols for plant regeneration via somatic embryogenesis do not include maturation stage. The present work was carried out with the aim of achieving the maturation and germination of sorghum somatic embryos in cultivar 'CIAP 132R-05'. It were studied four concentrations of sucrose (30, 50, 70 and 90 g l-1, two of abscisic acid (0.25 and 0.5 μM and a control without this growth regulator. Germination initiation (days and number of somatic embryos with complete germination were evaluated in three periods (1 - 7, 8 - 14 and 15 - 21 days of culture. In addition, the effect of 6-BAP (8.9, 17.8 and 26.6 μM on somatic embryo germination was determined. The germination start time (days and after 21 days the number of somatic embryos with complete germination and plants with malformations were determined. The addition of 70 g l-1 sucrose in the culture medium without abscisic acid increased the germination of the somatic embryos to 37.2 plants per embryo group (0.5 g of fresh mass. The highest number of somatic embryos germinated was obtained with 17.78 μM 6-BAP in the germination culture medium. It was demonstrated the need of a maturation stage in the sorghum somatic embryogenesis to increase the germination percentage.   Keywords: somatic embryogenesis, sorghum, sucrose, 6-BAP

  7. Systems Insight into the Spore Germination of Streptomyces coelicolor

    Czech Academy of Sciences Publication Activity Database

    Straková, Eva; Bobek, Jan; Ziková, Alice; Řehulka, P.; Benada, Oldřich; Řehulková, H.; Kofroňová, Olga; Vohradský, Jiří

    2013-01-01

    Roč. 12, č. 1 (2013), s. 517-528 ISSN 1535-3893 R&D Projects: GA ČR GAP302/11/0229; GA ČR GAP302/10/0468; GA ČR GA310/07/1009 Institutional support: RVO:61388971 Keywords : germination * differentiation * protein expression Subject RIV: EE - Microbiology, Virology Impact factor: 5.001, year: 2013

  8. Lipolytic activity in high temperature germinating Almond seedlings

    African Journals Online (AJOL)

    bahri

    2012-09-20

    Sep 20, 2012 ... Felipe A (1981). Germination accelérée d'amandes au moyen de l'acide gibbérellique. Cahier Options Méditerranéennes I:139-140. Hirayama O, Matsuda H (1972). An improved method for determining lipolytic acylhydrolases activity. Agric. Biol. Chem. 36(10):1831-. 1833. Garcia-Olmedo R, Marca-Garcia ...

  9. PLANT INDUCTION OF GERMINATION OF WITCH WEED SEEDS

    African Journals Online (AJOL)

    radial rows, each row containing four disks, as shown in Figure 1. Another 500 |xl of sterile distilled water was added through the slit on the upper piece of filter paper and the petri dish sealed with parafimi M and incubated at 27 °C in the dark for 48 hr in an incubator. Germination testing by the cut-root assay was ...

  10. Germinated, toasted and cooked chickpea as ingredients for breadmaking

    OpenAIRE

    Ouazib, Meriem; Garzón, Raquel; Farid Zaidi, Farid; Rosell, Cristina M.

    2016-01-01

    The effect of processing (germination, toasting and cooking) of chickpea beans was investigated on the resulting flours characteristics and their potential for obtaining gluten free breads. Rheological properties of dough were recorded using Mixolab�� and breads were analyzed for their instrumental quality, nutritional and sensory properties. Chickpea based doughs showed low consistency and their rheological behavior was defined by the starch gelatinization and gelification. The bread made wi...

  11. Germination and seedling frost tolerance differ between the native and invasive range in common ragweed.

    Science.gov (United States)

    Leiblein-Wild, Marion Carmen; Kaviani, Rana; Tackenberg, Oliver

    2014-03-01

    Germination characteristics and frost tolerance of seedlings are crucial parameters for establishment and invasion success of plants. The characterization of differences between populations in native and invasive ranges may improve our understanding of range expansion and adaptation. Here, we investigated germination characteristics of Ambrosia artemisiifolia L., a successful invader in Europe, under a temperature gradient between 5 and 25 °C. Besides rate and speed of germination we determined optimal, minimal and maximal temperature for germination of ten North American and 17 European populations that were sampled along major latitudinal and longitudinal gradients. We furthermore investigated the frost tolerance of seedlings. Germination rate was highest at 15 °C and germination speed was highest at 25 °C. Germination rate, germination speed, frost tolerance of seedlings, and the temperature niche width for germination were significantly higher and broader, respectively, for European populations. This was partly due to a higher seed mass of these populations. Germination traits lacked evidence for adaptation to climatic variables at the point of origin for both provenances. Instead, in the native range, seedling frost tolerance was positively correlated with the risk of frosts which supports the assumption of local adaptation. The increased frost tolerance of European populations may allow germination earlier in the year which may subsequently lead to higher biomass allocation--due to a longer growing period--and result in higher pollen and seed production. The increase in germination rates, germination speed and seedling frost tolerance might result in a higher fitness of the European populations which may facilitate further successful invasion and enhance the existing public health problems associated with this species.

  12. Study of Seed Germination by Soaking Methode of Cacao (Theobroma cacao L.

    Directory of Open Access Journals (Sweden)

    Sulistyani Pancaningtyas

    2014-12-01

    Full Text Available Study of germination methods conduct to get information about seed viability based on germination rate, percentage of germination and vigority. Germination methods was studied to get the efficiency and effectivity of germination, easy to handle, low costs with high vigority. Sand and gunny sack methods  for germination, need extensive place  and 3-4 days germination period after planting. This research will study the alternative of germination method with soaking. This method can be accelerating  germination rate and effectively place usage without decreasing the quality of cacao seedling.The research was done at Kaliwining Experimental Station, Indonesian Coffee and Cocoa Research Institue. This research consist of two experiment was arranged based on factorial completely random design. First experiment will observed to compared germination rate and the second experiment will observed seedling quality between soaking and wet gunny sack germination method.The results showed that length of radicel on soaking method longer than wet gunny sack method. Growth of radicel started from 2 hours after soaking, moreover length of radicel at 4 hours after soaking have significant different value with gunny sack method. On 24 hours after soaking have 3,69 mm and 0,681 mm on wet gunny sack treatment. Except lengt of hipocotyl, there is not different condition between seedling that out came  from soaking and wet gunny sack method. Length of hipocotyl on 36 hours after soaking have 9,15 cm and significant different between wet gunny sack germination method that have 5,40 cm. Keywords : seed germination, soaking method, Theobroma cacao L., cocoa seedlings

  13. Germination and early plant development of ten plant species ...

    Science.gov (United States)

    Ten agronomic plant species were exposed to different concentrations of nano titanium dioxide (nTiO2) or nano cerium oxide (nCeO2) (0, 250, 500 and 1000 mg/L) to examine potential effects on germination and early seedling development. We modified a standard test protocol developed for soluble chemicals (OPPTS 850.4200) to determine if such an approach might be useful for screening engineered nanomaterials (ENMs) and whether there were differences in response across a range of commercially important plant species to two common metal oxide ENMs. Eight of 10 species responded to nTiO2, and 5 species responded to nCeO2. Overall, it appeared that early root growth may be a more sensitive indicator of potential effects from ENM exposure than germination. The observed effects did not always relate to the exposure concentration, indicating that mass-based concentration may not fully explain developmental effects of these two ENMs. The results suggest that nTiO2 and nCeO2 have different effects on early plant growth of agronomic species, which may alter the timing of specific developmental events during their life cycle. In addition, standard germination tests, which are commonly used for toxicity screening of new materials, may not detect the subtle but potentially more important changes associated with early growth and development in terrestrial plants. Engineered nanoparticles (ENMs) have been recognized as valuable components of new technologies and are current

  14. Enhancement of radiation damage in germinating wheat seeds by hyperthermia

    International Nuclear Information System (INIS)

    Guo Fangqing; Gu Ruiqi

    1994-01-01

    Enhancement of X-ray induced radiation damage in germinating wheat seeds by heat treatment (44 degree C or 41 degree C, 20 min) has been investigated. The enhancement effect of heat treatment after irradiation was more significant than that of heat treatment before irradiation at dose range of 4.3-8.6 Gy. It was observed that germinating wheat seeds were very sensitive to heat treatment within 15 min after irradiation, which indicated that the repair of radiation damage was very active and rapid in a short period after irradiation. The repair of radiation damage in interval of fractionated irradiation was severely inhibited by heat treatment. The sensitivity of seeds to heat treatment corresponded with the levels of their repair activities. The more active the repairs of the seeds are, the more sensitive to heat treatment the seeds show. It was assumed that the enhancement of radiation damage by heat treatment in germinating wheat seeds was attributed to the inhibition of radiation damage repair by heat treatment, which is similar to the results of animal experiments

  15. In vitro germination and acclimatization of cambui tree type seedlings

    Directory of Open Access Journals (Sweden)

    Ana da Silva Lédo

    2014-01-01

    Full Text Available There are few reports in literature on the in vitro behavior of cambui tree (Myrciaria tenella O. Berg and acclimatization conditions. The aim of this study was to evaluate the effect of culture media on in vitro germination and the effect of different substrates on the acclimatization of two Myrciaria tenella types. The study was carried out at the Embrapa Tabuleiros Costeiros Laboratory of Plant Tissue Culture, Aracaju, SE. Seeds were extracted from fruits of two Myrciaria tenella types: Orange and Purple Types. The seeds were inoculated in the following culture media: T1 - MS medium + 30g L -1 sucrose, T2 - 1/2 MS medium + 15g L -1 sucrose and T3 - control without MS salts. To study the effect of substrates on acclimatization, seedlings were transferred to plastic containers with capacity of 300cm 3 containing the following sterilized substrates: S1 - soil and powdered coconut husk - SPC (1:1 by volume; S2 - soil, washed sand and powdered coconut husk - SAPC (1:1:1 by volume and S3 - Biomix (r commercial substrate - SC. The medium without MS salts promoted 100% in vitro germination and 1/2 MS medium greater development of seedlings. All substrates studied are suitable for acclimatization of seedlings germinated in vitro. Myrciaria tenella of yellow type showed greater vigor during acclimatization.

  16. Phytotoxicity of nanoparticles: Inhibition of seed germination and root growth

    International Nuclear Information System (INIS)

    Lin Daohui; Xing Baoshan

    2007-01-01

    Plants need to be included to develop a comprehensive toxicity profile for nanoparticles. Effects of five types of nanoparticles (multi-walled carbon nanotube, aluminum, alumina, zinc, and zinc oxide) on seed germination and root growth of six higher plant species (radish, rape, ryegrass, lettuce, corn, and cucumber) were investigated. Seed germination was not affected except for the inhibition of nanoscale zinc (nano-Zn) on ryegrass and zinc oxide (nano-ZnO) on corn at 2000 mg/L. Inhibition on root growth varied greatly among nanoparticles and plants. Suspensions of 2000 mg/L nano-Zn or nano-ZnO practically terminated root elongation of the tested plant species. Fifty percent inhibitory concentrations (IC 50 ) of nano-Zn and nano-ZnO were estimated to be near 50 mg/L for radish, and about 20 mg/L for rape and ryegrass. The inhibition occurred during the seed incubation process rather than seed soaking stage. These results are significant in terms of use and disposal of engineered nanoparticles. - Engineered nanoparticles can inhibit the seed germination and root growth

  17. Phytotoxicity of nanoparticles: Inhibition of seed germination and root growth

    Energy Technology Data Exchange (ETDEWEB)

    Lin Daohui [Department of Environmental Science, Zhejiang University, Hangzhou 310028 (China); Department of Plant, Soil and Insect Sciences, University of Massachusetts, Stockbridge Hall, Amherst, MA 01003 (United States); Xing Baoshan [Department of Plant, Soil and Insect Sciences, University of Massachusetts, Stockbridge Hall, Amherst, MA 01003 (United States)], E-mail: bx@pssci.umass.edu

    2007-11-15

    Plants need to be included to develop a comprehensive toxicity profile for nanoparticles. Effects of five types of nanoparticles (multi-walled carbon nanotube, aluminum, alumina, zinc, and zinc oxide) on seed germination and root growth of six higher plant species (radish, rape, ryegrass, lettuce, corn, and cucumber) were investigated. Seed germination was not affected except for the inhibition of nanoscale zinc (nano-Zn) on ryegrass and zinc oxide (nano-ZnO) on corn at 2000 mg/L. Inhibition on root growth varied greatly among nanoparticles and plants. Suspensions of 2000 mg/L nano-Zn or nano-ZnO practically terminated root elongation of the tested plant species. Fifty percent inhibitory concentrations (IC{sub 50}) of nano-Zn and nano-ZnO were estimated to be near 50 mg/L for radish, and about 20 mg/L for rape and ryegrass. The inhibition occurred during the seed incubation process rather than seed soaking stage. These results are significant in terms of use and disposal of engineered nanoparticles. - Engineered nanoparticles can inhibit the seed germination and root growth.

  18. Seed dormancy and germination - Emerging mechanisms and new hypotheses

    Directory of Open Access Journals (Sweden)

    Hiroyuki eNonogaki

    2014-05-01

    Full Text Available Seed dormancy has played a significant role in adaptation and evolution of seed plants. While its biological significance is clear, molecular mechanisms underlying seed dormancy induction, maintenance and alleviation still remain elusive. Intensive efforts have been made to investigate gibberellin and abscisic acid metabolism in seeds, which greatly contributed to the current understanding of seed dormancy mechanisms. Other mechanisms, which might be independent of hormones, or specific to the seed dormancy pathway, are also emerging from genetic analysis of seed dormancy mutants. These studies suggest that chromatin remodeling through histone ubiquitination, methylation and acetylation, which could lead to transcription elongation or gene silencing, may play a significant role in seed dormancy regulation. Small interfering RNA and/or long non-coding RNA might be a trigger of epigenetic changes at the seed dormancy or germination loci, such as DELAY OF GERMINATION1. While new mechanisms are emerging from genetic studies of seed dormancy, novel hypotheses are also generated from seed germination study with high throughput gene expression analysis. Recent studies on tissue-specific gene expression in tomato and Arabidopsis seeds, which suggested possible mechanosensing in the regulatory mechanisms, advanced our understanding of embryo-endosperm interaction and have potential to re-draw the traditional hypotheses or integrate them into a comprehensive scheme. The progress in basic seed science will enable knowledge translation, another frontier of research to be expanded for food and fuel production.

  19. Arabidopsis DREB2C modulates ABA biosynthesis during germination.

    Science.gov (United States)

    Je, Jihyun; Chen, Huan; Song, Chieun; Lim, Chae Oh

    2014-09-12

    Plant dehydration-responsive element binding factors (DREBs) are transcriptional regulators of the APETELA2/Ethylene Responsive element-binding Factor (AP2/ERF) family that control expression of abiotic stress-related genes. We show here that under conditions of mild heat stress, constitutive overexpression seeds of transgenic DREB2C overexpression Arabidopsis exhibit delayed germination and increased abscisic acid (ABA) content compared to untransformed wild-type (WT). Treatment with fluridone, an inhibitor of the ABA biosynthesis abrogated these effects. Expression of an ABA biosynthesis-related gene, 9-cis-epoxycarotenoid dioxygenase 9 (NCED9) was up-regulated in the DREB2C overexpression lines compared to WT. DREB2C was able to trans-activate expression of NCED9 in Arabidopsis leaf protoplasts in vitro. Direct and specific binding of DREB2C to a complete DRE on the NCED9 promoter was observed in electrophoretic mobility shift assays. Exogenous ABA treatment induced DREB2C expression in germinating seeds of WT. Vegetative growth of transgenic DREB2C overexpression lines was more strongly inhibited by exogenous ABA compared to WT. These results suggest that DREB2C is a stress- and ABA-inducible gene that acts as a positive regulator of ABA biosynthesis in germinating seeds through activating NCED9 expression. Copyright © 2014 Elsevier Inc. All rights reserved.

  20. A Quick-Test for Biochar Effects on Seed Germination ...

    Science.gov (United States)

    Biochar is being globally evaluated as a soil amendment to improve soil characteristics (e.g. soil water holding, nutrient exchange, microbiology, pesticides and chemical availability) to increase crop yields. Unfortunately, there are no quick tests to determine what biochar types are most effective at improving soil characteristics amenable for higher crop yields. Seed germination is a critical parameter for plant establishment and may be a quick indicator of biochar quality. We adapted Oregon State University Seed Laboratory procedures to develop a “quick-test” for screening the effects of biochar on seed germination. We used 11.0 cm rectangular x 3.5 cm deep containers fitted with blotter paper. The paper was premoistened with reverse-osmosis water, followed by placement of seeds (25 in a uniform 5 x 5 vacuum-assisted pattern, and biochar mixtures). A Norfolk and Coxville soil series from South Carolina were used. A total of 18 biochars were evaluated that were produced from 6 feedstocks (pine chips, poultry litter, swine solids, switchgrass, and two blends of pine chips and poultry litter); with biochar from each feedstock made by pyrolysis at 350, 500 and 700 ̊ C. Crops were cabbage, cucumber, onion, ryegrass and tomato. Preliminary results from the test indicated differences in seed germination due to soil type and possibly soil x biochar feedstock interactions. Other measurements including shoot dry weight per plate and pH of the soil+ biochar mixtur