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Sample records for riparian tree species

  1. Comparison of leaf-on and leaf-off ALS data for mapping riparian tree species

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    Laslier, Marianne; Ba, Antoine; Hubert-Moy, Laurence; Dufour, Simon

    2017-10-01

    Forest species composition is a fundamental indicator of forest study and management. However, describing forest species composition at large scales and of highly diverse populations remains an issue for which remote sensing can provide significant contribution, in particular, Airborne Laser Scanning (ALS) data. Riparian corridors are good examples of highly valuable ecosystems, with high species richness and large surface areas that can be time consuming and expensive to monitor with in situ measurements. Remote sensing could be useful to study them, but few studies have focused on monitoring riparian tree species using ALS data. This study aimed to determine which metrics derived from ALS data are best suited to identify and map riparian tree species. We acquired very high density leaf-on and leaf-off ALS data along the Sélune River (France). In addition, we inventoried eight main riparian deciduous tree species along the study site. After manual segmentation of the inventoried trees, we extracted 68 morphological and structural metrics from both leaf-on and leaf-off ALS point clouds. Some of these metrics were then selected using Sequential Forward Selection (SFS) algorithm. Support Vector Machine (SVM) classification results showed good accuracy with 7 metrics (0.77). Both leaf-on and leafoff metrics were kept as important metrics for distinguishing tree species. Results demonstrate the ability of 3D information derived from high density ALS data to identify riparian tree species using external and internal structural metrics. They also highlight the complementarity of leaf-on and leaf-off Lidar data for distinguishing riparian tree species.

  2. Development of Microsatellite Loci for the Riparian Tree Species Melaleuca argentea (Myrtaceae Using 454 Sequencing

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    Paul G. Nevill

    2013-05-01

    Full Text Available Premise of the study: Microsatellite primers were developed for Melaleuca argentea (Myrtaceae to evaluate genetic diversity and population genetic structure of this broadly distributed northern Australian riparian tree species. Methods and Results: 454 GS-FLX shotgun sequencing was used to obtain 5860 sequences containing putative microsatellite motifs. Two multiplex PCRs were optimized to genotype 11 polymorphic microsatellite loci. These loci were screened for variation in individuals from two populations in the Pilbara region, northwestern Western Australia. Overall, observed heterozygosities ranged from 0.27 to 0.86 (mean: 0.52 and the number of alleles per locus ranged from two to 13 (average: 4.3. Conclusions: These microsatellite loci will be useful in future studies of the evolutionary history and population and spatial genetic structure in M. argentea, and inform the development of seed sourcing strategies for the species.

  3. Caloric content of leaves of five tree species from the riparian vegetation in a forest fragment from South Brazil

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    Leandro Fabrício Fiori

    2015-09-01

    Full Text Available Abstract Aim: The measurement of the caloric content evidences the amount of energy that remains in the leaf and that can be released to the aquatic trophic chain. We assessed the energy content of leaves from five riparian tree species of a forest fragment in south Brazil and analyzed whether leaf caloric content varied between leaf species and between seasons (dry and wet. The studied sites are located in Northwest of Paraná State, inside a Semi-Deciduous Forest fragment beside two headwater streams. Methods Sampling sites were located along the riparian vegetation of these two water bodies, and due to its proximity and absence of statistical differences of caloric values, analyzed as one compartment. Results Caloric content varied significantly among species and among all pairs of species, with exception of Nectandra cuspidata Ness and Calophyllum brasiliensis Cambess. Two species presented significant differences between seasons, Sloanea guianensis (Aubl. Ben and Calophyllum brasiliensis Cambess. Conclusions The absence of significant seasonal differences of energy content for some species may be due to the characteristics of the tropical forest, in which temperature did not varied dramatically between seasons. However, the energy differed between species and seasons for some species, emphasizing the necessity of a preliminary inspection of energy content, before tracing energy fluxes instead of using a single value to all species from riparian vegetation.

  4. Tree mortality in response to typhoon-induced floods and mudslides is determined by tree species, size, and position in a riparian Formosan gum forest in subtropical Taiwan.

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    Tzeng, Hsy-Yu; Wang, Wei; Tseng, Yen-Hsueh; Chiu, Ching-An; Kuo, Chu-Chia; Tsai, Shang-Te

    2018-01-01

    Global warming-induced extreme climatic changes have increased the frequency of severe typhoons bringing heavy rains; this has considerably affected the stability of the forest ecosystems. Since the Taiwan 921 earthquake occurred in 21 September 1999, the mountain geology of the Island of Taiwan has become unstable and typhoon-induced floods and mudslides have changed the topography and geomorphology of the area; this has further affected the stability and functions of the riparian ecosystem. In this study, the vegetation of the unique Aowanda Formosan gum forest in Central Taiwan was monitored for 3 years after the occurrence of floods and mudslides during 2009-2011. Tree growth and survival, effects of floods and mudslides, and factors influencing tree survival were investigated. We hypothesized that (1) the effects of floods on the survival are significantly different for each tree species; (2) tree diameter at breast height (DBH) affects tree survival-i.e., the larger the DBH, the higher the survival rate; and (3) the relative position of trees affects tree survival after disturbances by floods and mudslides-the farther trees are from the river, the higher is their survival rate. Our results showed that after floods and mudslides, the lifespans of the major tree species varied significantly. Liquidambar formosana displayed the highest flood tolerance, and the trunks of Lagerstoemia subcostata began rooting after disturbances. Multiple regression analysis indicated that factors such as species, DBH, distance from sampled tree to the above boundary of sample plot (far from the riverbank), and distance from the upstream of the river affected the lifespans of trees; the three factors affected each tree species to different degrees. Furthermore, we showed that insect infestation had a critical role in determining tree survival rate. Our 3-year monitoring investigation revealed that severe typhoon-induced floods and mudslides disturbed the riparian vegetation in the

  5. Tree mortality in response to typhoon-induced floods and mudslides is determined by tree species, size, and position in a riparian Formosan gum forest in subtropical Taiwan

    Science.gov (United States)

    Tzeng, Hsy-Yu; Wang, Wei; Tseng, Yen-Hsueh; Chiu, Ching-An; Kuo, Chu-Chia

    2018-01-01

    Global warming-induced extreme climatic changes have increased the frequency of severe typhoons bringing heavy rains; this has considerably affected the stability of the forest ecosystems. Since the Taiwan 921 earthquake occurred in 21 September 1999, the mountain geology of the Island of Taiwan has become unstable and typhoon-induced floods and mudslides have changed the topography and geomorphology of the area; this has further affected the stability and functions of the riparian ecosystem. In this study, the vegetation of the unique Aowanda Formosan gum forest in Central Taiwan was monitored for 3 years after the occurrence of floods and mudslides during 2009–2011. Tree growth and survival, effects of floods and mudslides, and factors influencing tree survival were investigated. We hypothesized that (1) the effects of floods on the survival are significantly different for each tree species; (2) tree diameter at breast height (DBH) affects tree survival–i.e., the larger the DBH, the higher the survival rate; and (3) the relative position of trees affects tree survival after disturbances by floods and mudslides–the farther trees are from the river, the higher is their survival rate. Our results showed that after floods and mudslides, the lifespans of the major tree species varied significantly. Liquidambar formosana displayed the highest flood tolerance, and the trunks of Lagerstoemia subcostata began rooting after disturbances. Multiple regression analysis indicated that factors such as species, DBH, distance from sampled tree to the above boundary of sample plot (far from the riverbank), and distance from the upstream of the river affected the lifespans of trees; the three factors affected each tree species to different degrees. Furthermore, we showed that insect infestation had a critical role in determining tree survival rate. Our 3-year monitoring investigation revealed that severe typhoon-induced floods and mudslides disturbed the riparian vegetation

  6. A novel dendrochronological approach reveals drivers of carbon sequestration in tree species of riparian forests across spatiotemporal scales.

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    Rieger, Isaak; Kowarik, Ingo; Cherubini, Paolo; Cierjacks, Arne

    2017-01-01

    Aboveground carbon (C) sequestration in trees is important in global C dynamics, but reliable techniques for its modeling in highly productive and heterogeneous ecosystems are limited. We applied an extended dendrochronological approach to disentangle the functioning of drivers from the atmosphere (temperature, precipitation), the lithosphere (sedimentation rate), the hydrosphere (groundwater table, river water level fluctuation), the biosphere (tree characteristics), and the anthroposphere (dike construction). Carbon sequestration in aboveground biomass of riparian Quercus robur L. and Fraxinus excelsior L. was modeled (1) over time using boosted regression tree analysis (BRT) on cross-datable trees characterized by equal annual growth ring patterns and (2) across space using a subsequent classification and regression tree analysis (CART) on cross-datable and not cross-datable trees. While C sequestration of cross-datable Q. robur responded to precipitation and temperature, cross-datable F. excelsior also responded to a low Danube river water level. However, CART revealed that C sequestration over time is governed by tree height and parameters that vary over space (magnitude of fluctuation in the groundwater table, vertical distance to mean river water level, and longitudinal distance to upstream end of the study area). Thus, a uniform response to climatic drivers of aboveground C sequestration in Q. robur was only detectable in trees of an intermediate height class and in taller trees (>21.8m) on sites where the groundwater table fluctuated little (≤0.9m). The detection of climatic drivers and the river water level in F. excelsior depended on sites at lower altitudes above the mean river water level (≤2.7m) and along a less dynamic downstream section of the study area. Our approach indicates unexploited opportunities of understanding the interplay of different environmental drivers in aboveground C sequestration. Results may support species-specific and

  7. Metapopulation modelling of riparian tree species persistence in river networks under climate change.

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    Van Looy, Kris; Piffady, Jérémy

    2017-11-01

    Floodplain landscapes are highly fragmented by river regulation resulting in habitat degradation and flood regime perturbation, posing risks to population persistence. Climate change is expected to pose supplementary risks in this context of fragmented landscapes, and especially for river systems adaptation management programs are developed. The association of habitat quality and quantity with the landscape dynamics and resilience to human-induced disturbances is still poorly understood in the context of species survival and colonization processes, but essential to prioritize conservation and restoration actions. We present a modelling approach that elucidates network connectivity and landscape dynamics in spatial and temporal context to identify vital corridors and conservation priorities in the Loire river and its tributaries. Alteration of flooding and flow regimes is believed to be critical to population dynamics in river ecosystems. Still, little is known of critical levels of alteration both spatially and temporally. We applied metapopulation modelling approaches for a dispersal-limited tree species, white elm; and a recruitment-limited tree species, black poplar. In different model steps the connectivity and natural dynamics of the river landscape are confronted with physical alterations (dams/dykes) to species survival and then future scenarios for climatic changes and potential adaptation measures are entered in the model and translated in population persistence over the river basin. For the two tree species we highlighted crucial network zones in relation to habitat quality and connectivity. Where the human impact model already shows currently restricted metapopulation development, climate change is projected to aggravate this persistence perspective substantially. For both species a significant drawback to the basin population is observed, with 1/3 for elm and ¼ for poplar after 25 years already. But proposed adaptation measures prove effective to even

  8. Riparian trees as common denominators across the river flow ...

    African Journals Online (AJOL)

    Riparian tree species, growing under different conditions of water availability, can ... leaf area and increasing wood density correlating with deeper groundwater levels. ... and Sanddrifskloof Rivers (South Africa) under reduced flow conditions.

  9. Water sources accessed by arid zone riparian trees in highly saline environments, Australia.

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    Costelloe, Justin F; Payne, Emily; Woodrow, Ian E; Irvine, Elizabeth C; Western, Andrew W; Leaney, Fred W

    2008-05-01

    The flow regimes of arid zone rivers are often highly variable, and shallow groundwater in the alluvial aquifers can be very saline, thus constraining the availability and quality of the major water sources available to riparian trees-soil water, shallow groundwater and stream water. We have identified water sources and strategies used by riparian trees in more highly saline and arid conditions than previously studied for riparian trees of arid zone rivers. Our research focused on the riparian species Eucalyptus coolabah, one of the major riparian trees of ephemeral arid zone rivers in Australia. The water sources available to this riparian tree were examined using delta(18)O isotope data from xylem, soil water, groundwater and surface water. Additionally, soil chloride and matric potential data were used to infer zones of water availability for root uptake. Despite the saline conditions, the trees used a mixture of soil water and groundwater sources, but they did not use surface water directly. The study identified three strategies used to cope with typically high groundwater and soil water salinities. Firstly, the trees preferentially grow in zones of most frequent flushing by infiltrating streamflow, such as the bank-tops of channels. Secondly, the trees limit water use by having low transpiration rates. Thirdly, the trees are able to extract water at very low osmotic potentials, with water uptake continuing at chloride concentrations of at least 20,000-30,000 mg L(-1).

  10. Enhanced transpiration by riparian buffer trees in response to advection in a humid temperate agricultural landscape

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    Hernandez-Santana, V.; Asbjornsen, H.; Sauer, T.; Isenhart, T.; Schilling, K.; Schultz, Ronald

    2011-01-01

    Riparian buffers are designed as management practices to increase infiltration and reduce surface runoff and transport of sediment and nonpoint source pollutants from crop fields to adjacent streams. Achieving these ecosystem service goals depends, in part, on their ability to remove water from the soil via transpiration. In these systems, edges between crop fields and trees of the buffer systems can create advection processes, which could influence water use by trees. We conducted a field study in a riparian buffer system established in 1994 under a humid temperate climate, located in the Corn Belt region of the Midwestern U.S. (Iowa). The goals were to estimate stand level transpiration by the riparian buffer, quantify the controls on water use by the buffer system, and determine to what extent advective energy and tree position within the buffer system influence individual tree transpiration rates. We primarily focused on the water use response (determined with the Heat Ratio Method) of one of the dominant species (Acer saccharinum) and a subdominant (Juglans nigra). A few individuals of three additional species (Quercus bicolor, Betula nigra, Platanus occidentalis) were monitored over a shorter time period to assess the generality of responses. Meteorological stations were installed along a transect across the riparian buffer to determine the microclimate conditions. The differences found among individuals were attributed to differences in species sap velocities and sapwood depths, location relative to the forest edge and prevailing winds and canopy exposure and dominance. Sapflow rates for A. saccharinum trees growing at the SE edge (prevailing winds) were 39% greater than SE interior trees and 30% and 69% greater than NW interior and edge trees, respectively. No transpiration enhancement due to edge effect was detected in the subdominant J. nigra. The results were interpreted as indicative of advection effects from the surrounding crops. Further, significant

  11. Environmental tolerance of an invasive riparian tree and its potential for continued spread in the southwestern US

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    Reynolds, L.V.; Cooper, D.J.

    2010-01-01

    Questions: Exotic plant invasion may be aided by facilitation and broad tolerance of environmental conditions, yet these processes are poorly understood in species-rich ecosystems such as riparian zones. In the southwestern United States (US) two plant species have invaded riparian zones: tamarisk (Tamarix ramosissima, T. chinensis, and their hybrids) and Russian olive (Elaeagnus angustifolia). We addressed the following questions: (1) is Russian olive able to tolerate drier and shadier conditions than cottonwood and tamarisk? (2) Can tamarisk and cottonwood facilitate Russian olive invasion? Location: Arid riparian zones, southwestern US. Methods: We analyzed riparian tree seedling requirements in a controlled experiment, performed empirical field studies, and analyzed stable oxygen isotopes to determine the water sources used by Russian olive. Results: Russian olive survival was significantly higher in dense shade and low moisture conditions than tamarisk and cottonwood. Field observations indicated Russian olive established where flooding cannot occur, and under dense canopies of tamarisk, cottonwood, and Russian olive. Tamarisk and native riparian plant species seedlings cannot establish in these dry, shaded habitats. Russian olive can rely on upper soil water until 15 years of age, before utilizing groundwater. Conclusions: We demonstrate that even though there is little evidence of facilitation by cottonwood and tamarisk, Russian olive is able to tolerate dense shade and low moisture conditions better than tamarisk and cottonwood. There is great potential for continued spread of Russian olive throughout the southwestern US because large areas of suitable habitat exist that are not yet inhabited by this species. ?? 2010 International Association for Vegetation Science.

  12. Insects of the riparian

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    Terrence J. Rogers

    1996-01-01

    This paper describes life histories, defoliation problems and other activities of insects associated with forest tree species growing along high elevation streams and river banks. In addition, examples of insects and diseases associated with lower elevation riparian areas are given.

  13. Assessing the Effects of Periodic Flooding on the Population Structure and Recruitment Rates of Riparian Tree Forests

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    Jean-Sébastien Berthelot

    2014-08-01

    Full Text Available Riparian forest stands are subjected to a variety of hydrological stresses as a result of annual fluctuations in water levels during the growing season. Spring floods create additional water-related stress as a result of a major inflow of water that floods riverside land. This exploratory study assesses the impacts of successive floods on tree dynamics and regeneration in an active sedimentation area, while determining the age of the stands using the recruitment rates, tree structure and tree rings based on dendrochronological analysis. Environmental data were also recorded for each vegetation quadrat. In total, 2633 tree stems were tallied throughout the quadrats (200 m2, and tree specimens were analyzed based on the various flood zones. A total of 720 specimens were counted (100 m2 strip to measure natural regeneration. Higher recruitment rates are noted for the no-flood zones and lower rates in active floodplains. During the period of the establishment of tree species, the survival rates are comparable between the flood zones and the no-flood zones. Tree diameter distribution reveals a strong predominance of young trees in flooded areas. Different factors appear to come into play in the dynamics of riparian forest stands, including the disruptions associated with successive flooding.

  14. Review of Invasive Riparian Trees that Impact USACE Ecosystem Restoration Projects

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    2016-08-01

    often release seeds in periods of stress , including periods when exposed to herbicides or mechanical disturbances. Such characteristics make this...Approved for public release ; distribution is unlimited. ERDC TN-EMRRP-SI-36 August 2016 Review of Invasive Riparian Trees that Impact USACE...various spatial control methods for woody invasive plant removal in densely vegetated riparian habitats. The USACE ecosystem restoration mission has

  15. Demographic histories of adaptively diverged riparian and non-riparian species of Ainsliaea (Asteraceae) inferred from coalescent analyses using multiple nuclear loci.

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    Mitsui, Yuki; Setoguchi, Hiroaki

    2012-12-28

    Understanding demographic histories, such as divergence time, patterns of gene flow, and population size changes, in ecologically diverging lineages provide implications for the process and maintenance of population differentiation by ecological adaptation. This study addressed the demographic histories in two independently derived lineages of flood-resistant riparian plants and their non-riparian relatives [Ainsliaea linearis (riparian) and A. apiculata (non-riparian); A. oblonga (riparian) and A. macroclinidioides (non-riparian); Asteraceae] using an isolation-with-migration (IM) model based on variation at 10 nuclear DNA loci. The highest posterior probabilities of the divergence time parameters were estimated to be ca. 25,000 years ago for A. linearis and A. apiculata and ca. 9000 years ago for A. oblonga and A. macroclinidioides, although the confidence intervals of the parameters had broad ranges. The likelihood ratio tests detected evidence of historical gene flow between both riparian/non-riparian species pairs. The riparian populations showed lower levels of genetic diversity and a significant reduction in effective population sizes compared to the non-riparian populations and their ancestral populations. This study showed the recent origins of flood-resistant riparian plants, which are remarkable examples of plant ecological adaptation. The recent divergence and genetic signatures of historical gene flow among riparian/non-riparian species implied that they underwent morphological and ecological differentiation within short evolutionary timescales and have maintained their species boundaries in the face of gene flow. Comparative analyses of adaptive divergence in two sets of riparian/non-riparian lineages suggested that strong natural selection by flooding had frequently reduced the genetic diversity and size of riparian populations through genetic drift, possibly leading to fixation of adaptive traits in riparian populations. The two sets of riparian/non-riparian

  16. Methane Fluxes at the Tree Stem, Soil, and Ecosystem-scales in a Cottonwood Riparian Forest

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    Flanagan, L. B.; Nikkel, D. J.; Scherloski, L. M.; Tkach, R. E.; Rood, S. B.

    2017-12-01

    Trees can emit methane to the atmosphere that is produced by microbes inside their decaying stems or by taking up and releasing methane that is produced by microbes in adjacent, anoxic soil layers. The significance of these two methane production pathways for possible net release to the atmosphere depends on the magnitude of simultaneous oxidation of atmospheric methane that occurs in well-aerated, shallow soil zones. In order to quantify the significance of these processes, we made methane flux measurements using the eddy covariance technique at the ecosystem-scale and via chamber-based methods applied on the soil surface and on tree stems in a riparian cottonwood ecosystem in southern Alberta that was dominated by Populus tree species and their natural hybrids. Tree stem methane fluxes varied greatly among individual Populus trees and changed seasonally, with peak growing season average values of 4 nmol m-2 s-1 (tree surface area basis). When scaled to the ecosystem, the tree stem methane emissions (0.9 nmol m-2 s-1, ground area basis) were slightly higher than average soil surface methane uptake rates (-0.8 nmol m-2 s-1). In addition, we observed regular nighttime increases in methane concentration within the forest boundary layer (by 300 nmol mol-1 on average at 22 m height during July). The majority of the methane concentration build-up was flushed from the ecosystem to the well-mixed atmosphere, with combined eddy covariance and air column storage fluxes reaching values of 70-80 nmol m-2 s-1 for approximately one hour after sunrise. Daily average net methane emission rates at the ecosystem-scale were 4.4 nmol m-2 s-1 during July. Additional lab studies demonstrated that tree stem methane was produced via the CO2-reduction pathway, as tissue in the central stem of living Populus trees was being decomposed. This study demonstrated net methane emission from an upland, cottonwood forest ecosystem, resulting from microbe methane production in tree stems that

  17. Decomposition of leaf litter from a native tree and an actinorhizal invasive across riparian habitats.

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    Harner, Mary J; Crenshaw, Chelsea L; Abelho, Manuela; Stursova, Martina; Shah, Jennifer J Follstad; Sinsabaugh, Robert L

    2009-07-01

    Dynamics of nutrient exchange between floodplains and rivers have been altered by changes in flow management and proliferation of nonnative plants. We tested the hypothesis that the nonnative, actinorhizal tree, Russian olive (Elaeagnus angustifolia), alters dynamics of leaf litter decomposition compared to native cottonwood (Populus deltoides ssp. wislizeni) along the Rio Grande, a river with a modified flow regime, in central New Mexico (U.S.A.). Leaf litter was placed in the river channel and the surface and subsurface horizons of forest soil at seven riparian sites that differed in their hydrologic connection to the river. All sites had a cottonwood canopy with a Russian olive-dominated understory. Mass loss rates, nutrient content, fungal biomass, extracellular enzyme activities (EEA), and macroinvertebrate colonization were followed for three months in the river and one year in forests. Initial nitrogen (N) content of Russian olive litter (2.2%) was more than four times that of cottonwood (0.5%). Mass loss rates (k; in units of d(-1)) were greatest in the river (Russian olive, k = 0.0249; cottonwood, k = 0.0226), intermediate in subsurface soil (Russian olive, k = 0.0072; cottonwood, k = 0.0031), and slowest on the soil surface (Russian olive, k = 0.0034; cottonwood, k = 0.0012) in a ratio of about 10:2:1. Rates of mass loss in the river were indistinguishable between species and proportional to macroinvertebrate colonization. In the riparian forest, Russian olive decayed significantly faster than cottonwood in both soil horizons. Terrestrial decomposition rates were related positively to EEA, fungal biomass, and litter N, whereas differences among floodplain sites were related to hydrologic connectivity with the river. Because nutrient exchanges between riparian forests and the river have been constrained by flow management, Russian olive litter represents a significant annual input of N to riparian forests, which now retain a large portion of slowly

  18. Riparian trees as common denominators across the river flow ...

    African Journals Online (AJOL)

    2014-03-04

    Mar 4, 2014 ... may be a valuable indicator for water stress, while the other measurements might provide ... O'Keeffe, 2000) as the life histories of riparian plants are inti- .... Southern Africa, some in the context of groundwater depend- .... and C. gratissimus were spread out next to a ruler on a white .... The data were log.

  19. Effects of thinning on transpiration by riparian buffer trees in response to advection and solar radiation

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    Advective energy occurring in edge environments may increase tree water use. In humid agricultural landscapes, advection-enhanced transpiration in riparian buffers may provide hydrologic regulation; however, research in humid environments is lacking. The objectives of this study were to determine ho...

  20. RELATIONSHIPS OF ALIEN PLANT SPECIES ABUNDANCE TO RIPARIAN VEGETATION, ENVIRONMENT, AND DISTURBANCE

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    Riparian ecosystems are often invaded by alien species. We evaluated vegetation, environment, and disturbance conditions and their interrelationships with alien species abundance along reaches of 29 streams in eastern Oregon, USA. Using flexible-BETA clustering, indicator species...

  1. DEVELOPMENT OF AN INDEX OF ALIEN SPECIES INVASIVENESS: AN AID TO ASSESSING RIPARIAN VEGETATION CONDITION

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    Many riparian areas are invaded by alien plant species that negatively affect native species composition, community dynamics and ecosystem properties. We sampled vegetation along reaches of 31 low order streams in eastern Oregon, and characterized species assemblages at patch an...

  2. Niche construction within riparian corridors. Part I: Exploring biogeomorphic feedback windows of three pioneer riparian species (Allier River, France)

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    Hortobágyi, Borbála; Corenblit, Dov; Steiger, Johannes; Peiry, Jean-Luc

    2018-03-01

    Within riparian corridors, biotic-abiotic feedback mechanisms occur between woody vegetation strongly influenced by hydrogeomorphic constraints (e.g., sediment transport and deposition, shear stress, hydrological variability), fluvial landforms, and morphodynamics, which in turn are modulated by the established vegetation. During field investigations in spring 2015, we studied 16 alluvial bars (e.g., point and lateral bars) within the dynamic riparian corridor of the Allier River (France) to assess the aptitude of three pioneer riparian Salicaceae species (Populus nigra L., Salix purpurea L., and Salix alba L.) to establish and act as ecosystem engineers by trapping sediment and constructing fluvial landforms. Our aim is to empirically identify the preferential establishment area (EA; i.e., the local areas where species become established) and the preferential biogeomorphic feedback window (BFW; i.e., where and to what extent the species and geomorphology interact) of these three species on alluvial bars within a 20-km-long river reach. Our results show that the EA and BFW of all three species vary significantly along the longitudinal profile, i.e., upstream-downstream exposure on the alluvial bars, as well as transversally, i.e., the main hydrological connectivity gradient from the river channel toward the floodplain. In the present-day context of the Allier River, P. nigra is the most abundant species, appearing to act as the main engineer species affecting landform dynamics at the bar scale; S. purpurea is established and acts as an ecosystem engineer at locations on alluvial bars that are most exposed to hydrosedimentary flow dynamics, while S. alba is established on the bar tail close to secondary channels and affects the geomorphology in mixed patches along with P. nigra. Our study highlights the role of functional trait diversity of riparian engineer species in controlling the extent of fluvial landform construction along geomorphic gradients within riparian

  3. Spatial Structure of Soil Macrofauna Diversity and Tree Canopy in Riparian Forest of Maroon River

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    Ehsan Sayad

    2017-02-01

    Full Text Available Introduction: Sustainability and maintenance of riparian vegetation or restoring of degraded sites is critical to sustain inherent ecosystem function and values. Description of patterns in species assemblages and diversity is an essential step before generating hypotheses in functional ecology. If we want to have information about ecosystem function, soil biodiversity is best considered by focusing on the groups of soil organisms that play major roles in ecosystem functioning when exploring links with provision of ecosystem services. Information about the spatial pattern of soil biodiversity at the regional scale is limited though required, e.g. for understanding regional scale effects of biodiversity on ecosystem processes. The practical consequences of these findings are useful for sustainable management of soils and in monitoring soil quality. Soil macrofauna play significant, but largely ignored roles in the delivery of ecosystem services by soils at plot and landscape scales. One main reason responsible for the absence of information about biodiversity at regional scale is the lack of adequate methods for sampling and analyzing data at this dimension. An adequate approach for the analysis of spatial patterns is a transect study in which samples are taken in a certain order and with a certain distance between samples. Geostatistics provide descriptive tools such as variogram to characterize the spatial pattern of continuous and categorical soil attributes. This method allows assessment of consistency of spatial patterns as well as the scale at which they are expressed. This study was conducted to analyze spatial patterns of soil macrofauna in relation to tree canopy in the riparian forest landscape of Maroon. Materilas and Methods: The study was carried out in the Maroon riparian forest of the southeasternIran (30o 38/- 30 o 39/ N and 50 o 9/- 50 o 10/ E. The climate of the study area is semi-arid. Average yearly rainfall is about 350.04 mm

  4. Plant biomass and species composition along an environmental gradient in montane riparian meadows

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    Kathleen A. Dwire; J. Boone Kauffman; E. N. Jack Brookshire; John E. Baham

    2004-01-01

    In riparian meadows, narrow zonation of the dominant vegetation frequently occurs along the elevational gradient from the stream edge to the floodplain terrace. We measured plant species composition and above- and belowground biomass in three riparian plant communities - a priori defined as wet, moist, and dry meadow - along short streamside topographic gradients in...

  5. Riparian restoration in the Southwest: Species selection, propagation, planting methods, and case studies

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    David Dreesen; John Harrington; Tom Subirge; Pete Stewart; Greg Fenchel

    2002-01-01

    Riparian plant communities, though small in overall area, are among the most valuable natural areas in the Southwest. The causes of degradation of southwestern riparian zones range from excessive cattle and elk grazing in montane watersheds to invasive woody exotic species and lack of natural flooding in the cottonwood forests, "bosque," of low elevation...

  6. Influence of Riparian Tree Phenology on Lower Colorado River Spring-Migrating Birds: Implications of Flower Cueing

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    McGrath, Laura J.; van Riper, Charles

    2005-01-01

    Executive Summary Neotropical migrant birds make choices about which habitats are most likely to provide successful foraging locations during migration, but little is known about how these birds recognize and process environmental clues that indicate the presence of prey species. Aspects of tree phenology, notably flowering of trees along the lower Colorado River corridor, coincide with the migratory stopovers of leaf-gleaning insectivorous songbirds and may be an important indicator of arthropod prey species availability. Shifting tree flowering and leaf flush during the spring migration period presents avian insectivores with an assortment of foraging opportunities. During two field seasons at Cibola National Wildlife Refuge in southwestern Arizona, we examined riparian tree species to test whether leaf-gleaning insectivorous birds are attracted to the flowering condition of trees in choosing foraging sites. We predicted that flowering trees would host more insect prey resources, would thus show increased visit rates, length of stays and attack ratios of migrant avian insectivores, and that those arthropods would be found in the stomach contents of the birds. Paired trees of honey mesquite (Prosopis glandulosa), displaying heavy and light degrees of flowering were observed to test these predictions. To test whether birds are tracking arthropods directly or are using flowers as a proximate cue, we removed flowers from selected trees and paired these treated trees with neighboring high flowering trees, which served as controls. Avian foraging behavior, avian diets, arthropods, and phenology data were collected at the same time to control for temporal differences in insect availability, plant phenology, and differences in stopover arrivals of birds. We documented five patterns from this study: 1) Higher abundance and richness of arthropods were found on honey mesquite trees with greater numbers of flowers. 2) Arthropod abundance and richness increased as flowering

  7. TREE SPECIES DIRECT SOWING FOR FOREST RESTORATION

    Directory of Open Access Journals (Sweden)

    Robério Anastácio Ferreira

    2007-09-01

    Full Text Available The direct sowing to tropical forest restoration can be viable when the ecological and silvicultural aspects of species areknown. This work evaluated the effect of breaking seed dormancy and a physical protector on the initial growth of riparian treespecies. The experiment was carried out in a randomized blocks design, in a factorial (2x2, with four blocks and four plots for eachtreatment. The treatment to break seed dormancy used were: immersion in sulphuric acid for 20 minutes and washing in water for 1hour plus soaking for 24 hours for Trema micrantha; immersion in boiling water (100oC with following soaking until refreshing for24 hours to Senna multijuga and Senna macranthera and pre-soaking in water for 2 hours for Solanum granuloso-leprosum. Thephysical protector used was a transparent plastic cup (500mL. The breaking seed dormancy used was efficient in laboratory, exceptfor S. macranthera. In field conditions, it was efficient only for S. multijuga and S. macranthera. The physical protector did notpresented any benefit for the studied tree species regarding seedlings emergence and survival, but it provided significant differencesin height and base diameter for S. multijuga and in height for S. macranthera after three months. After 24 months, T. micranthapresented the highest values for height and basal diameter. S. macranthera presented the height relative growth and T. micrantha thehighest basal diameter. The studied species can be recommended for ecological forest restoration, using direct sowing.

  8. Plant species distribution in relation to water-table depth and soil redox potential in montane riparian meadows

    Science.gov (United States)

    Kathleen A. Dwire; J. Boone Kauffman; John E. Baham

    2006-01-01

    The distribution of riparian plant species is largely driven by hydrologic and soil variables, and riparian plant communities frequently occur in relatively distinct zones along streamside elevational and soil textural gradients. In two montane meadows in northeast Oregon, USA, we examined plant species distribution in three riparian plant communities¡ªdefined as wet,...

  9. Does tree harvesting in riparian areas increase stream sedimentation and turbidity - world-wide experience relative to Australia.

    Science.gov (United States)

    Neary, D.; Smethurst, P.; Petrone, K.

    2009-04-01

    A typical improved-pasture property in the high-rainfall zone of Australia contains 0.5-2.0 km of waterways per 100 ha. Nationwide, some 25-30 million ha of improved pasture contains about 100,000 km of streams, of which about 75% are currently un-buffered and contributing to soil and water degradation. Farmers and natural resource managers are considering ways to enhance environmental outcomes at farm and catchment scales using stream-side buffers of trees and other perennial vegetation. Benefits of buffers include improved water quality, biodiversity, carbon sequestration and aesthetics. Lack of sound information and funding for establishing and managing buffer zones is hindering wide-scale adoption of this practice. Stream-side areas of farms are generally highly productive (wet and nutrient-rich) and contain a high biodiversity, but they are also high-risk zones for soil and water values and stock safety. Development of options based on a balance between environmental and economic outcomes would potentially promote wider adoption. Australian codes of forest practice currently discourage or prevent harvesting of trees in streamside buffers. These codes were developed exclusively for large-scale native forests and industrial-scale plantations, and were applicable to farm forestry as now required. In countries including USA and Germany trees in stream-side buffers are harvested using Best Management Practices. Trees may grow at a faster rate in riparian zones and provide a commercial return, but the impacts of tree establishment and harvesting on water yield and quality must be evaluated. However, there have been few designed experiments investigating this problem. Australia has recently initiated studies to explore the use of high-value timber species and associated vegetation in riparian zones to improve water quality, particularly suspended sediment. Preliminary information from the Yan Yan Gurt Catchment in Victoria indicate that forested riparian strips can

  10. INDICATED SPECIES TO RESTORATION OF RIPARIAN FORESTS IN SUBWATERSHED OF PEIXE-BOI RIVER, PARÁ STATE

    Directory of Open Access Journals (Sweden)

    Igor do Vale

    2014-09-01

    Full Text Available http://dx.doi.org/10.5902/1980509815736This study aims to indicate native species to be used in the restoration of degraded riparian forests in the subwatershed of Peixe-Boi river. All trees and shrubs with diameter at breast height (DBH > 5 cm were inventoried in ten areas of secondary forest and six areas of igapó forest. The results were analyzed by Principal Component Analysis and the silviculture of the species was assessed by literature review. In Igapó areas 66 species were found; the areas had low richness and low diversity index of Shannon, when compared with data from the secondary forests. The floristic composition was heterogeneous, and the floristic similarity is higher between areas that are closer geographically. In the secondary forests were found 175 species; the areas showed high abundance of individuals, high species richness, diversity and evenness. Secondary forests were separated according to geographic proximity and age, which is directly linked to the successional stage. The PCA analysis established the ecological importance of 29 tree species; however only ten species had enough silvicultural information. Due to a greater ecological importance and viable silvicultural techniques available in the literature, Carapa guianensis, Pachira aquatica, Spondias mombin, Tapirira guianensis and Virola guianensis are the most suitable species to restore the degraded areas, in association with Inga edulis, Jacaranda copaia, Pseudopiptadenia psilostachya, Simarouba amara and Vismia guianensis of the secondary forests, that can be planted in the borders and in the nearby areas of igapó forests.

  11. Tree-growth analyses to estimate tree species' drought tolerance

    NARCIS (Netherlands)

    Eilmann, B.; Rigling, A.

    2012-01-01

    Climate change is challenging forestry management and practices. Among other things, tree species with the ability to cope with more extreme climate conditions have to be identified. However, while environmental factors may severely limit tree growth or even cause tree death, assessing a tree

  12. Comparing the Sexual Reproductive Success of Two Exotic Trees Invading Spanish Riparian Forests vs. a Native Reference.

    Science.gov (United States)

    Cabra-Rivas, Isabel; Castro-Díez, Pilar

    2016-01-01

    A widely accepted hypothesis in invasion ecology is that invasive species have higher survival through the early stages of establishment than do non-invasive species. In this study we explore the hypothesis that the sexual reproductive success of the invasive trees Ailanthus altissima (Mill.) Swingle and Robinia pseudoacacia L. is higher than that of the native Fraxinus angustifolia Vahl., all three species coexisting within the riparian forests of Central Spain. We compared different stages of the early life cycle, namely seed rain, seed infestation by insects, seed removal by local fauna, seed germination under optimal conditions and seedling abundance between the two invasive trees and the native, in order to assess their sexual reproductive success. The exotic species did not differ from the native reference (all three species displaying high seed rain and undergoing seed losses up to 50% due to seed removal by the local fauna). Even if the exotic R. pseudoacacia showed a high percentage of empty and insect-parasited seeds along with a low seedling emergence and the exotic A. altissima was the species with more viable seeds and of higher germinability, no differences were found regarding these variables when comparing them with the native F. angustifolia. Unsuitable conditions might have hampered either seedling emergence and survival, as seedling abundance in the field was lower than expected in all species -especially in R. pseudoacacia-. Our results rather suggest that the sexual reproductive success was not higher in the exotic trees than in the native reference, but studies focusing on long-term recruitment would help to shed light on this issue.

  13. Comparing the Sexual Reproductive Success of Two Exotic Trees Invading Spanish Riparian Forests vs. a Native Reference.

    Directory of Open Access Journals (Sweden)

    Isabel Cabra-Rivas

    Full Text Available A widely accepted hypothesis in invasion ecology is that invasive species have higher survival through the early stages of establishment than do non-invasive species. In this study we explore the hypothesis that the sexual reproductive success of the invasive trees Ailanthus altissima (Mill. Swingle and Robinia pseudoacacia L. is higher than that of the native Fraxinus angustifolia Vahl., all three species coexisting within the riparian forests of Central Spain. We compared different stages of the early life cycle, namely seed rain, seed infestation by insects, seed removal by local fauna, seed germination under optimal conditions and seedling abundance between the two invasive trees and the native, in order to assess their sexual reproductive success. The exotic species did not differ from the native reference (all three species displaying high seed rain and undergoing seed losses up to 50% due to seed removal by the local fauna. Even if the exotic R. pseudoacacia showed a high percentage of empty and insect-parasited seeds along with a low seedling emergence and the exotic A. altissima was the species with more viable seeds and of higher germinability, no differences were found regarding these variables when comparing them with the native F. angustifolia. Unsuitable conditions might have hampered either seedling emergence and survival, as seedling abundance in the field was lower than expected in all species -especially in R. pseudoacacia-. Our results rather suggest that the sexual reproductive success was not higher in the exotic trees than in the native reference, but studies focusing on long-term recruitment would help to shed light on this issue.

  14. Importance of riparian remnants for frog species diversity in a highly fragmented rainforest.

    Science.gov (United States)

    Rodríguez-Mendoza, Clara; Pineda, Eduardo

    2010-12-23

    Tropical forests undergo continuous transformation to other land uses, resulting in landscapes typified by forest fragments surrounded by anthropogenic habitats. Small forest fragments, specifically strip-shaped remnants flanking streams (referred to as riparian remnants), can be particularly important for the maintenance and conservation of biodiversity within highly fragmented forests. We compared frog species diversity between riparian remnants, other forest fragments and cattle pastures in a tropical landscape in Los Tuxtlas, Mexico. We found similar species richness in the three habitats studied and a similar assemblage structure between riparian remnants and forest fragments, although species composition differed by 50 per cent. Frog abundance was halved in riparian remnants compared with forest fragments, but was twice that found in pastures. Our results suggest that riparian remnants play an important role in maintaining a portion of frog species diversity in a highly fragmented forest, particularly during environmentally stressful (hot and dry) periods. In this regard, however, the role of riparian remnants is complementary, rather than substitutive, with respect to the function of other forest fragments within the fragmented forest.

  15. Niche construction within riparian corridors. Part II: The unexplored role of positive intraspecific interactions in Salicaceae species

    Science.gov (United States)

    Corenblit, Dov; Garófano-Gómez, Virginia; González, Eduardo; Hortobágyi, Borbála; Julien, Frédéric; Lambs, Luc; Otto, Thierry; Roussel, Erwan; Steiger, Johannes; Tabacchi, Eric; Till-Bottraud, Irène

    2018-03-01

    Within riparian corridors, Salicaceae trees and shrubs affect hydrogeomorphic processes and lead to the formation of wooded fluvial landforms. These trees form dense stands and enhance plant anchorage, as grouped plants are less prone to be uprooted than free-standing individuals. This also enhances their role as ecosystem engineers through the trapping of sediment, organic matter, and nutrients. The landform formation caused by these wooded biogeomorphic landforms probably represents a positive niche construction, which ultimately leads, through facilitative processes, to an improved capacity of the individual trees to survive, exploit resources, and reach sexual maturity in the interval between destructive floods. The facilitative effects of riparian vegetation are well established; however, the nature and intensity of biotic interactions among trees of the same species forming dense woody stands and constructing the niche remain unclear. Our hypothesis is that the niche construction process also comprises more direct intraspecific interactions, such as cooperation or altruism. Our aim in this paper is to propose an original theoretical framework for positive intraspecific interactions among riparian Salicaceae species operating from establishment to sexual maturity. Within this framework, we speculate that (i) positive intraspecific interactions among trees are maximized in dynamic river reaches; (ii) during establishment, intraspecific facilitation (or helping) occurs among trees and this leads to the maintenance of a dense stand that improves survival and growth because saplings protect each other from shear stress and scour; (iii) in addition to the improved capacity to trap mineral and organic matter, individuals that constitute the dense stand can cooperate to mutually support a mycorrhizal network that will connect plants, soil, and groundwater and influence nutrient transfer, cycling, and storage within the shared constructed niche; (iv) during post

  16. Estrutura e síndromes de dispersão de espécies arbóreas em um trecho de mata ciliar, Sirinhaém, Pernambuco, Brasil Structure and dispersal syndromes of tree species in a stretch of riparian vegetation, Sirinhaém, Pernambuco State, Brazil

    Directory of Open Access Journals (Sweden)

    Roseane Karla Soares da Silva

    2012-03-01

    Full Text Available

    Este trabalho teve por objetivo conhecer a fitossociologia do componente arboreo em uma mata ciliar de um corrego que desagua no Rio Sirinhaem, localizado no Engenho Buranhem, Sirinhaem, PE e identificar as sindromes de dispersao das especies. O corrego esta situado em um fragmento de Floresta Ombrofila Densa de Terras Baixas, com 272 ha. Utilizou-se como area amostral um hectare (40 unidades amostrais, 10 m x 25 m onde foram registrados 1.307 individuos arboreos com circunferencia a altura do peito (CAP ≥ 15 cm. Foram identificadas 118 especies, pertencentes a 40 familias botanicas. Protium heptaphyllum e Pouteria sp.1 foram as especies mais abundantes. Em termos de valor de importancia (VI, as especies Protium heptaphyllum, Pouteria sp.1 e Virola gardneri estao entre as mais importantes ecologicamente. As sindromes de dispersao predominantes foram: zoocoria (72,8%, autocoria (13,6% e anemocoria (4,8%. Nao foi possivel determinar a sindrome de dispersao de 8,8% das especies estudadas.

     

    doi: 10.4336/2012.pfb.32.69.01

    This study aimed to know the phytosociology of the tree component of riparian vegetation in a stream that flows into the Sirinhaem River in Engenho Buranhem, Sirinhaem, Pernambuco State, and identify the species dispersal syndromes. The stream is located in a fragment of dense rain forest of the lowlands, with 272 ha. It was sempled used one hectare (40 sampling units of 10 m x 25 m each. It was registered 1,307 trees with circumference at breast height (CAP . 15 cm. We identified 118 species belonging to 40 botanical families. Protium heptaphyllum and Pouteria sp.1 were the most abundant species. In terms of importance value (IV, Protium heptaphyllum, Pouteria sp.1 and Virola gardneri are among the most important ecologically species. The predominant dispersal syndromes were zoocory (72.8%, autocory (13.6% and anemochory (4.8%. It was not possible to determine the type of dispersal of 8.8% of the

  17. Plant Growth and Phosphorus Uptake of Three Riparian Grass Species

    Science.gov (United States)

    Riparian buffers can significantly reduce sediment-bound phosphorus (P) entering surface water, but control of dissolved P inputs is more challenging. Because plant roots remove P from soil solution, it follows that plant uptake will reduce dissolved P losses. We evaluated P uptake of smooth bromegr...

  18. Impacts of removing Chinese privet from riparian forests on plant communities and tree growth five years later

    Science.gov (United States)

    Jacob R. Hudson; James L. Hanula; Scott Horn

    2014-01-01

    An invasive shrub, Chinese privet (Ligustrum sinense Lour.), was removed from heavily infested riparian forests in the Georgia Piedmont in 2005 by mulching machine or chainsaw felling. Subsequent herbicide treatment eliminated almost all privet by 2007. Recovery of plant communities, return of Chinese privet, and canopy tree growth were measured on...

  19. Effects of climate-induced increases in summer drought on riparian plant species : a meta-analysis

    NARCIS (Netherlands)

    Garssen, Annemarie G.; Verhoeven, Jos T. A.; Soons, Merel B.

    Frequency and duration of summer droughts are predicted to increase in the near future in many parts of the world, with considerable anticipated effects on riparian plant community composition and species richness. Riparian plant communities along lowland streams are characterised by high species

  20. The Phytophthora species assemblage and diversity in riparian alder ecosystems of western Oregon, USA.

    Science.gov (United States)

    Sims, Laura Lee; Sutton, Wendy; Reeser, Paul; Hansen, Everett M

    2015-01-01

    Phytophthora species were systematically sampled, isolated, identified and compared for presence in streams, soil and roots of alder (Alnus species) dominated riparian ecosystems in western Oregon. We describe the species assemblage and evaluate Phytophthora diversity associated with alder. We recovered 1250 isolates of 20 Phytophthora species. Only three species were recovered from all substrates (streams, soil, alder roots): P. gonapodyides, the informally described "P. taxon Pgchlamydo", and P. siskiyouensis. P. alni ssp. uniformis along with five other species not previously recovered in Oregon forests are included in the assemblage: P.citricola s.l., P. gregata, P. gallica, P. nicotianae and P. parsiana. Phytophthora species diversity was greatest in downstream riparian locations. There was no significant difference in species diversity comparing soil and unwashed roots (the rhizosphere) to stream water. There was a difference between the predominating species from the rhizosphere compared to stream water. The most numerous species was the informally described "P. taxon Oaksoil", which was mainly recovered from, and most predominant in, stream water. The most common species from riparian forest soils and alder root systems was P. gonapodyides. © 2015 by The Mycological Society of America.

  1. Pervasive hydrologic effects on freshwater mussels and riparian trees in southeastern floodplain ecosystems

    Science.gov (United States)

    Andrew L. Rypel; Wendell R. Haag; Robert H. Findlay

    2009-01-01

    We present long-term growth trends for 13 freshwater mussel species from two unregulated rivers and one regulated river in the southeastern U.S. Coastal Plain. We also collected baldcypress (Taxodium distichum (L.) Rich.) tree cores adjacent to mussel collection sites in one river and directly compared tree and mussel chronologies in this river. To extend our analysis...

  2. Effects of temperature, moisture and soil type on seedling emergence and mortality of riparian plant species

    NARCIS (Netherlands)

    ter Heerdt, Gerard N. J.; Veen, Ciska G.F.; van der Putten, Wim H.; Bakker, Jan P.

    Restoration of riparian plant communities on bare soil requires germination of seeds and establishment of seedlings. However, species that are present in the soil seed bank do not always establish in the vegetation. Temperature, moisture conditions and soil type could play a major role in the

  3. Effects of temperature, moisture and soil type on seedling emergence and mortality of riparian plant species

    NARCIS (Netherlands)

    Heerdt, ter Gerard N.J.; Veen, Ciska G.F.; Putten, van der Wim H.; Bakker, Jan P.

    2017-01-01

    Restoration of riparian plant communities on bare soil requires germination of seeds and establishment of seedlings. However, species that are present in the soil seed bank do not always establish in the vegetation. Temperature, moisture conditions and soil type could play a major role in the

  4. Effects of temperature, moisture and soil type on seedling emergence and mortality of riparian plant species

    NARCIS (Netherlands)

    Ter Heerdt, Gerard N.J.; Veen, G.F.; Van der Putten, Wim H.; Bakker, Jan P.

    Abstract Restoration of riparian plant communities on bare soil requires germination of seeds and establishment of seedlings. However, species that are present in the soil seed bank do not always establish in the vegetation. Temperature, moisture conditions and soil type could play a major role in

  5. Watershed Management For Endangered Aquatic and Riparian Species: Facts and Fallacies

    Science.gov (United States)

    D.G. Neary; J.N. Rinne; A.L. Medina; M.B. Baker; J.L. Michael

    2000-01-01

    River basin management is becoming increasingly complex in the United States since watershed managers are required to take into consideration the threatened and endangered (T&E) species that inhabit aquatic and riparian ecosystems. Unfortunately too many fallacies and political agendas have crept into the picture. Suppositions and hypotheses fly everywhere in the...

  6. Tree-growth analyses to estimate tree species' drought tolerance.

    Science.gov (United States)

    Eilmann, Britta; Rigling, Andreas

    2012-02-01

    Climate change is challenging forestry management and practices. Among other things, tree species with the ability to cope with more extreme climate conditions have to be identified. However, while environmental factors may severely limit tree growth or even cause tree death, assessing a tree species' potential for surviving future aggravated environmental conditions is rather demanding. The aim of this study was to find a tree-ring-based method suitable for identifying very drought-tolerant species, particularly potential substitute species for Scots pine (Pinus sylvestris L.) in Valais. In this inner-Alpine valley, Scots pine used to be the dominating species for dry forests, but today it suffers from high drought-induced mortality. We investigate the growth response of two native tree species, Scots pine and European larch (Larix decidua Mill.), and two non-native species, black pine (Pinus nigra Arnold) and Douglas fir (Pseudotsuga menziesii Mirb. var. menziesii), to drought. This involved analysing how the radial increment of these species responded to increasing water shortage (abandonment of irrigation) and to increasingly frequent drought years. Black pine and Douglas fir are able to cope with drought better than Scots pine and larch, as they show relatively high radial growth even after irrigation has been stopped and a plastic growth response to drought years. European larch does not seem to be able to cope with these dry conditions as it lacks the ability to recover from drought years. The analysis of trees' short-term response to extreme climate events seems to be the most promising and suitable method for detecting how tolerant a tree species is towards drought. However, combining all the methods used in this study provides a complete picture of how water shortage could limit species.

  7. Variation in experimental flood impacts and ecogeomorphic feedbacks among native and exotic riparian tree seedlings

    Science.gov (United States)

    Kui, L.; Stella, J. C.; Skorko, K.; Lightbody, A.; Wilcox, A. C.; Bywater-Reyes, S.

    2012-12-01

    Flooding interacts with riparian plants on a variety of scales, resulting in coevolution of geomorphic surfaces with plant vegetation communities. Our research aims to develop a mechanistic understanding of riparian seedling damage from small floods, with a focus on differential responses among species (native and non-native), ecogeomorphic feedbacks, and implications for riparian restoration. We tested the effects of controlled flood events on cottonwood (Populus fremontii) and tamarisk (Tamarix spp.) seedlings in an experimental meandering stream channel. We hypothesized that seedling dislodgement and burial would be influenced by individual plant height, species-specific morphology, patch density, and differences in hydraulic forces (as a function of location on the bar). Four experimental floods were tested, with different combinations of plant species and seedling densities. For each flood run, rooted seedlings were installed within a 1.5-m-wide sandbar during low flow conditions and stream discharge was increased to a constant flood level for approximately 8 hours, after which seedling response was assessed. Seedling damage was analyzed within a logistic regression framework that predicted the probability of dislodgement or burial as a function of the explanatory variables. Plant dislodgement depended on root length and the location on the sandbar, whereas burial depended on plant height, species-specific morphology, and location. For every centimeter increase in plant height, the odds of plant burial decreased by 10 percent, illustrating the rate at which plants developed flood resistance as they grow taller. With every meter closer to the thalweg, plant dislodgement was four times more likely, and plant burial was 2.6 times more likely. The probability of burial was twice as great for tamarisk seedlings as for cottonwood. The increased sedimentation within tamarisk patches was associated with a denser foliage and a more compact crown for this species. The

  8. Conservation of soil, water and nutrients in surface runoff using riparian plant species.

    Science.gov (United States)

    Srivastava, Prabodh; Singh, Shipra

    2012-01-01

    Three riparian plant species viz. Cynodon dactylon (L.) Pers., Saccharum bengalensis Retz. and Parthenium hysterophorus L. were selected from the riparian zone of Kali river at Aligarh to conduct the surface runoff experiment to compare their conservation efficiencies for soil, water and nutrients (phosphorus and nitrogen). Experimental plots were prepared on artificial slopes in botanical garden and on natural slopes on study site. Selected riparian plant species showed the range of conservation values for soil and water from 47.11 to 95.22% and 44.06 to 72.50%, respectively on artificial slope and from 44.53 to 95.33% and 48.36 to 73.15%, respectively on natural slope. Conservation values for phosphorus and nitrogen ranged from 40.83 to 88.89% and 59.78 to 82.22%, respectively on artificial slope and from 50.01 to 90.16% and 68.07 to 85.62%, respectively on natural slope. It was observed that Cynodon dactylon was the most efficient riparian species in conservation of soil, water and nutrients in surface runoff.

  9. Reconciliation with non-binary species trees.

    Science.gov (United States)

    Vernot, Benjamin; Stolzer, Maureen; Goldman, Aiton; Durand, Dannie

    2008-10-01

    Reconciliation extracts information from the topological incongruence between gene and species trees to infer duplications and losses in the history of a gene family. The inferred duplication-loss histories provide valuable information for a broad range of biological applications, including ortholog identification, estimating gene duplication times, and rooting and correcting gene trees. While reconciliation for binary trees is a tractable and well studied problem, there are no algorithms for reconciliation with non-binary species trees. Yet a striking proportion of species trees are non-binary. For example, 64% of branch points in the NCBI taxonomy have three or more children. When applied to non-binary species trees, current algorithms overestimate the number of duplications because they cannot distinguish between duplication and incomplete lineage sorting. We present the first algorithms for reconciling binary gene trees with non-binary species trees under a duplication-loss parsimony model. Our algorithms utilize an efficient mapping from gene to species trees to infer the minimum number of duplications in O(|V(G) | x (k(S) + h(S))) time, where |V(G)| is the number of nodes in the gene tree, h(S) is the height of the species tree and k(S) is the size of its largest polytomy. We present a dynamic programming algorithm which also minimizes the total number of losses. Although this algorithm is exponential in the size of the largest polytomy, it performs well in practice for polytomies with outdegree of 12 or less. We also present a heuristic which estimates the minimal number of losses in polynomial time. In empirical tests, this algorithm finds an optimal loss history 99% of the time. Our algorithms have been implemented in NOTUNG, a robust, production quality, tree-fitting program, which provides a graphical user interface for exploratory analysis and also supports automated, high-throughput analysis of large data sets.

  10. Tree mortality in mature riparian forest: Implications for Fremont cottonwood conservation in the American southwest

    Science.gov (United States)

    Andersen, Douglas

    2015-01-01

    Mature tree mortality rates are poorly documented in desert riparian woodlands. I monitored deaths and calculated annual survivorship probability (Ps) in 2 groups of large (27–114 cm DBH), old (≥40 years old) Fremont cottonwood (Populus fremontii Wats.) in a stand along the free-flowing Yampa River in semiarid northwestern Colorado. Ps = 0.993 year-1 in a group (n = 126) monitored over 2003–2013, whereas Ps = 0.985 year-1 in a group (n = 179) monitored over the same period plus 3 earlier years (2000–2003) that included drought and a defoliating insect outbreak. Assuming Ps was the same for both groups during the 10-year postdrought period, the data indicate that Ps = 0.958 year-1 during the drought. I found no difference in canopy dieback level between male and female survivors. Mortality was equal among size classes, suggesting Ps is independent of age, but published longevity data imply that either Ps eventually declines with age or, as suggested in this study, periods with high Ps are interrupted by episodes of increased mortality. Stochastic population models featuring episodes of low Ps suggest a potential for an abrupt decline in mature tree numbers where recruitment is low. The modeling results have implications for woodland conservation, especially for relictual stands along regulated desert rivers.

  11. SHRUBBY TREE COMPONENT OF RIPARIAN CORRIDORS IN RESTORATION AND NATURAL REMAINING AREAS OF MATRIX FORESTRY, RIO NEGRINHO, SC STATE

    Directory of Open Access Journals (Sweden)

    Eliziane Carla Scariot

    2014-06-01

    Full Text Available http://dx.doi.org/10.5902/1980509814578The aim of this study was to analyze the shrubby tree component in riparian corridors in restoration process and natural remainders in a matrix forestry. We identified the richness, diversity, dispersal and pollination syndromes of the individuals and estimate the floristic similarity. The study was conducted at the producing farm of Pinus spp. wood Santa Alice, located in Rio Negrinho city, Santa Catarina state, Brazil. We adopted the center-quarter method for survey the shrubby tree component in four sample groups: CA (advanced stage of riparian corridors vegetation, CR (riparian corridors in restoration, MA (advanced stage of natural remaining, MI (intermediate stage of natural remaining. We found the highest richness and diversity index in MA and CR. Regarding the number of individuals, the dispersal and pollination syndromes predominant in all sample groups were zoochory and zoophilia. CR and CA had the highest percentage of floristic similarity while MA and MI did not form clusters. The sample group CR has composition, richness and diversity more similar to CA. This indicates that the restoration of riparian zones has conditions to rescue the components and the interactions of an ecological community.

  12. Big data of tree species distributions

    DEFF Research Database (Denmark)

    Serra-Diaz, Josep M.; Enquist, Brian J.; Maitner, Brian

    2018-01-01

    are currently available in big databases, several challenges hamper their use, notably geolocation problems and taxonomic uncertainty. Further, we lack a complete picture of the data coverage and quality assessment for open/public databases of tree occurrences. Methods: We combined data from five major...... and data aggregation, especially from national forest inventory programs, to improve the current publicly available data.......Background: Trees play crucial roles in the biosphere and societies worldwide, with a total of 60,065 tree species currently identified. Increasingly, a large amount of data on tree species occurrences is being generated worldwide: from inventories to pressed plants. While many of these data...

  13. Tree species differentiation using intensity data derived from leaf-on and leaf-off airborne laser scanner data

    Science.gov (United States)

    Sooyoung Kim; Robert J. McGaughey; Hans-Erik Andersen; Gerard. Schreuder

    2009-01-01

    Tree species identification is important for a variety of natural resource management and monitoring activities including riparian buffer characterization, wildfire risk assessment, biodiversity monitoring, and wildlife habitat assessment. Intensity data recorded for each laser point in a LIDAR system is related to the spectral reflectance of the target material and...

  14. Inter-species competition-facilitation in stochastic riparian vegetation dynamics.

    Science.gov (United States)

    Tealdi, Stefano; Camporeale, Carlo; Ridolfi, Luca

    2013-02-07

    Riparian vegetation is a highly dynamic community that lives on river banks and which depends to a great extent on the fluvial hydrology. The stochasticity of the discharge and erosion/deposition processes in fact play a key role in determining the distribution of vegetation along a riparian transect. These abiotic processes interact with biotic competition/facilitation mechanisms, such as plant competition for light, water, and nutrients. In this work, we focus on the dynamics of plants characterized by three components: (1) stochastic forcing due to river discharges, (2) competition for resources, and (3) inter-species facilitation due to the interplay between vegetation and fluid dynamics processes. A minimalist stochastic bio-hydrological model is proposed for the dynamics of the biomass of two vegetation species: one species is assumed dominant and slow-growing, the other is subdominant, but fast-growing. The stochastic model is solved analytically and the probability density function of the plant biomasses is obtained as a function of both the hydrologic and biologic parameters. The impact of the competition/facilitation processes on the distribution of vegetation species along the riparian transect is investigated and remarkable effects are observed. Finally, a good qualitative agreement is found between the model results and field data. Copyright © 2012 Elsevier Ltd. All rights reserved.

  15. Tree structural and species diversities in Okwangwo Forest, Cross ...

    African Journals Online (AJOL)

    Tree species were grouped into abundance classes. A total of 125 tree species belonging to 36 families and 96 genera were recorded in the area with Margaleffs index of species richness of 2.2754. Most (99) of the tree species encountered were threatened/endangered, 23 species were rare with only 3 tree species ...

  16. Reconciliation of Gene and Species Trees

    Directory of Open Access Journals (Sweden)

    L. Y. Rusin

    2014-01-01

    Full Text Available The first part of the paper briefly overviews the problem of gene and species trees reconciliation with the focus on defining and algorithmic construction of the evolutionary scenario. Basic ideas are discussed for the aspects of mapping definitions, costs of the mapping and evolutionary scenario, imposing time scales on a scenario, incorporating horizontal gene transfers, binarization and reconciliation of polytomous trees, and construction of species trees and scenarios. The review does not intend to cover the vast diversity of literature published on these subjects. Instead, the authors strived to overview the problem of the evolutionary scenario as a central concept in many areas of evolutionary research. The second part provides detailed mathematical proofs for the solutions of two problems: (i inferring a gene evolution along a species tree accounting for various types of evolutionary events and (ii trees reconciliation into a single species tree when only gene duplications and losses are allowed. All proposed algorithms have a cubic time complexity and are mathematically proved to find exact solutions. Solving algorithms for problem (ii can be naturally extended to incorporate horizontal transfers, other evolutionary events, and time scales on the species tree.

  17. Abundance and species richness of snakes along the Middle Rio Grande riparian forest in New Mexico

    Science.gov (United States)

    Heather L. Bateman; Alice Chung-MacCoubrey; Howard L. Snell; Deborah M. Finch

    2009-01-01

    To understand the effects of removal of non-native plants and fuels on wildlife in the riparian forest of the Middle Rio Grande in New Mexico, we monitored snakes from 2000 to 2006 using trap arrays of drift fences, pitfalls, and funnel traps. We recorded 158 captures of 13 species of snakes from 12 study sites. We captured more snakes in funnel traps than in pitfalls...

  18. Slope variation and population structure of tree species from different ecological groups in South Brazil.

    Science.gov (United States)

    Bianchini, Edmilson; Garcia, Cristina C; Pimenta, José A; Torezan, José M D

    2010-09-01

    Size structure and spatial arrangement of 13 abundant tree species were determined in a riparian forest fragment in Paraná State, South Brazil (23°16'S and 51°01'W). The studied species were Aspidosperma polyneuron Müll. Arg., Astronium graveolens Jacq. and Gallesia integrifolia (Spreng) Harms (emergent species); Alseis floribunda Schott, Ruprechtia laxiflora Meisn. and Bougainvillea spectabilis Willd. (shade-intolerant canopy species); Machaerium paraguariense Hassl, Myroxylum peruiferum L. and Chrysophyllum gonocarpum (Mart. & Eichler ex Miq.) Engl. (shade-tolerant canopy species); Sorocea bonplandii (Baill.) Bürger, Trichilia casaretti C. Dc, Trichilia catigua A. Juss. and Actinostemon concolor (Spreng.) Müll. Arg. (understory small trees species). Height and diameter structures and basal area of species were analyzed. Spatial patterns and slope correlation were analyzed by Moran's / spatial autocorrelation coefficient and partial Mantel test, respectively. The emergent and small understory species showed the highest and the lowest variations in height, diameter and basal area. Size distribution differed among emergent species and also among canopy shade-intolerant species. The spatial pattern ranged among species in all groups, except in understory small tree species. The slope was correlated with spatial pattern for A. polyneuron, A. graveolens, A. floribunda, R. laxiflora, M. peruiferum and T. casaretti. The results indicated that most species occurred in specific places, suggesting that niche differentiation can be an important factor in structuring the tree community.

  19. Tree Species Identity Shapes Earthworm Communities

    DEFF Research Database (Denmark)

    Schelfhout, Stephanie; Mertens, Jan; Verheyen, Kris

    2017-01-01

    Earthworms are key organisms in forest ecosystems because they incorporate organic material into the soil and affect the activity of other soil organisms. Here, we investigated how tree species affect earthworm communities via litter and soil characteristics. In a 36-year old common garden...... of soil and foliar litter, and determined the forest floor turnover rate and the density and biomass of the earthworm species occurring in the stands. Tree species significantly affected earthworm communities via leaf litter and/or soil characteristics. Anecic earthworms were abundant under Fraxinus, Acer...

  20. DLRS: gene tree evolution in light of a species tree.

    Science.gov (United States)

    Sjöstrand, Joel; Sennblad, Bengt; Arvestad, Lars; Lagergren, Jens

    2012-11-15

    PrIME-DLRS (or colloquially: 'Delirious') is a phylogenetic software tool to simultaneously infer and reconcile a gene tree given a species tree. It accounts for duplication and loss events, a relaxed molecular clock and is intended for the study of homologous gene families, for example in a comparative genomics setting involving multiple species. PrIME-DLRS uses a Bayesian MCMC framework, where the input is a known species tree with divergence times and a multiple sequence alignment, and the output is a posterior distribution over gene trees and model parameters. PrIME-DLRS is available for Java SE 6+ under the New BSD License, and JAR files and source code can be downloaded from http://code.google.com/p/jprime/. There is also a slightly older C++ version available as a binary package for Ubuntu, with download instructions at http://prime.sbc.su.se. The C++ source code is available upon request. joel.sjostrand@scilifelab.se or jens.lagergren@scilifelab.se. PrIME-DLRS is based on a sound probabilistic model (Åkerborg et al., 2009) and has been thoroughly validated on synthetic and biological datasets (Supplementary Material online).

  1. Pushing the pace of tree species migration.

    Directory of Open Access Journals (Sweden)

    Eli D Lazarus

    Full Text Available Plants and animals have responded to past climate changes by migrating with habitable environments, sometimes shifting the boundaries of their geographic ranges by tens of kilometers per year or more. Species migrating in response to present climate conditions, however, must contend with landscapes fragmented by anthropogenic disturbance. We consider this problem in the context of wind-dispersed tree species. Mechanisms of long-distance seed dispersal make these species capable of rapid migration rates. Models of species-front migration suggest that even tree species with the capacity for long-distance dispersal will be unable to keep pace with future spatial changes in temperature gradients, exclusive of habitat fragmentation effects. Here we present a numerical model that captures the salient dynamics of migration by long-distance dispersal for a generic tree species. We then use the model to explore the possible effects of assisted colonization within a fragmented landscape under a simulated tree-planting scheme. Our results suggest that an assisted-colonization program could accelerate species-front migration rates enough to match the speed of climate change, but such a program would involve an environmental-sustainability intervention at a massive scale.

  2. Perspectives on screening winter-flood-tolerant woody species in the riparian protection forests of the three gorges reservoir.

    Science.gov (United States)

    Yang, Fan; Wang, Yong; Chan, Zhulong

    2014-01-01

    The establishment of riparian protection forests in the Three Gorges Reservoir (TGR) is an ideal measure to cope with the eco-environmental problems of the water-level fluctuation zone (WLFZ). Thus, the information for screening winter-flood-tolerant woody plant species is useful for the recovery and re-establishment of the riparian protection forests in the TGR WLFZ. Therefore, we discussed the possibilities of constructing and popularizing riparian protection forests in the TGR WLFZ from several aspects, including the woody plant species distribution in the WLFZ, the survival rate analyses of suitable candidate woody species under controlled flooding conditions, the survival rate investigation of some woody plant species planted in the TGR WLFZ, and the physiological responses of some woody plant species during the recovery stage after winter floods. The results of woody species investigation showed that most woody plant species that existed as annual seedlings in the TGR WLFZ are not suitable candidates for the riparian protection forests. However, arbor species (e.g., Salix matsudana, Populus×canadensis, Morus alba, Pterocarya stenoptera, Taxodium ascendens, and Metasequoia glyptostroboides) and shrub species (e.g., Salix variegata, Distylium chinensis, Lycium chinense, Myricaria laxiflora, and Rosa multiflora) might be considered suitable candidates for the riparian protection forests in the TGR WLFZ by survival rate analyses under controlled winter flooding conditions, and survival rate investigations of woody plant species planted in the TGR WLFZ, respectively. Physiological analyses showed that P.×canadensis, M. alba, L. chinense, and S. variegata could develop specific self-repairing mechanisms to stimulate biomass accumulation and carbohydrate synthesis via the increases in chlorophyll pigments and photosynthesis during recovery after winter floods. Our results suggested these woody plant species could endure the winter flooding stress and recover well

  3. Perspectives on screening winter-flood-tolerant woody species in the riparian protection forests of the three gorges reservoir.

    Directory of Open Access Journals (Sweden)

    Fan Yang

    Full Text Available The establishment of riparian protection forests in the Three Gorges Reservoir (TGR is an ideal measure to cope with the eco-environmental problems of the water-level fluctuation zone (WLFZ. Thus, the information for screening winter-flood-tolerant woody plant species is useful for the recovery and re-establishment of the riparian protection forests in the TGR WLFZ. Therefore, we discussed the possibilities of constructing and popularizing riparian protection forests in the TGR WLFZ from several aspects, including the woody plant species distribution in the WLFZ, the survival rate analyses of suitable candidate woody species under controlled flooding conditions, the survival rate investigation of some woody plant species planted in the TGR WLFZ, and the physiological responses of some woody plant species during the recovery stage after winter floods. The results of woody species investigation showed that most woody plant species that existed as annual seedlings in the TGR WLFZ are not suitable candidates for the riparian protection forests. However, arbor species (e.g., Salix matsudana, Populus×canadensis, Morus alba, Pterocarya stenoptera, Taxodium ascendens, and Metasequoia glyptostroboides and shrub species (e.g., Salix variegata, Distylium chinensis, Lycium chinense, Myricaria laxiflora, and Rosa multiflora might be considered suitable candidates for the riparian protection forests in the TGR WLFZ by survival rate analyses under controlled winter flooding conditions, and survival rate investigations of woody plant species planted in the TGR WLFZ, respectively. Physiological analyses showed that P.×canadensis, M. alba, L. chinense, and S. variegata could develop specific self-repairing mechanisms to stimulate biomass accumulation and carbohydrate synthesis via the increases in chlorophyll pigments and photosynthesis during recovery after winter floods. Our results suggested these woody plant species could endure the winter flooding stress

  4. Contrasting patterns of groundwater evapotranspiration in grass and tree dominated riparian zones of a temperate agricultural catchment

    Science.gov (United States)

    Satchithanantham, Sanjayan; Wilson, Henry F.; Glenn, Aaron J.

    2017-06-01

    Consumptive use of shallow groundwater by phreatophytic vegetation is a significant part of the water budget in many regions, particularly in riparian areas. The influence of vegetation type on groundwater level fluctuations and evapotranspiration has rarely been quantified for contrasting plant communities concurrently although it has implications for downstream water yield and quality. Hourly groundwater evapotranspiration (ETG) rates were estimated for grass and tree riparian vegetation in southwestern Manitoba, Canada using two modified White methods. Groundwater table depth was monitored in four 21 m transects of five 3 m deep monitoring wells in the riparian zone of a stream reach including tree (Acer negundo; boxelder) and grass (Bromus inermis; smooth brome) dominated segments. The average depths to the groundwater table from the surface were 1.4 m and 1 m for the tree and grass segments, respectively, over the two-year study. During rain free periods of the growing season ETG was estimated for a total of 70 days in 2014 and 79 days in 2015 when diurnal fluctuations were present in groundwater level. Diurnal groundwater level fluctuations were observed during dry periods under both segments, however, ETG was significantly higher (p < 0.001) under trees compared to grass cover in 2014 (a wet year with 72% higher than normal growing season precipitation) and 2015 (a drier year with 15% higher than normal growing season precipitation). The two methods used to estimate ETG produced similar daily and seasonal values for the two segments. In 2014, total ETG was approximately 50% (148 mm) and 100% (282-285 mm) of reference evapotranspiration (ETref, 281 mm) for the grass and tree segments, respectively. In 2015, total ETG was approximately 40% (106-127 mm) and 120% (369-374 mm) of ETref (307 mm) for the grass and tree segments, respectively. Results from the study show the tree dominated portions of the stream reach consumed approximately 2.4 ML ha-1 yr-1 more

  5. Isoprene emission from tropical tree species

    International Nuclear Information System (INIS)

    Padhy, P.K.; Varshney, C.K.

    2005-01-01

    Foliar emission of isoprene was measured in nine commonly growing tree species of Delhi, India. Dynamic flow enclosure technique was used and gas samples were collected onto Tenax-GC/Carboseive cartridges, which were then attached to the sample injection system in the gas chromatograph (GC). Eluting compounds were analysed using a flame ionisation detector (FID). Out of the nine tree species, isoprene emission was found in six species (Eucalyptus sp., Ficus benghalensis, Ficus religiosa, Mangifera indica, Melia azedarach, and Syzygium jambolanum), whereas, in the remaining three tree species (Alstonia scholaris, Azadirachta indica, and Cassia fistula) no isoprene emission was detected or the levels of emission were negligible or below the detection limit (BDL). Among six tree species, the highest hourly emission (10.2±6.8 μg g -1 leaf dry weight, average of five seasons) was observed in Ficus religiosa, while minimum emission was from Melia azedarach (2.2±4.9 μg g -1 leaf dry weight, average of five seasons). Isoprene emission (average of six species), over five seasons, was found to vary between 3.9 and 8.5 μg g -1 leaf dry weight during the rainy season. In addition, significant diurnal variation in isoprene emission was observed in each species. The preliminary estimate made in this study on the annual biogenic VOC emission from India may probably be the first of its kind from this part of the world. - Isoprene flux (diurnal and seasonal) from some tropical tree species was estimated and a regional comparison was made

  6. Isoprene emission from tropical tree species

    Energy Technology Data Exchange (ETDEWEB)

    Padhy, P.K. [School of Environmental Sciences, Jawaharlal Nehru University, New Delhi 110 067 (India)]. E-mail: padhypk2003@yahoo.com; Varshney, C.K. [School of Environmental Sciences, Jawaharlal Nehru University, New Delhi 110 067 (India)

    2005-05-01

    Foliar emission of isoprene was measured in nine commonly growing tree species of Delhi, India. Dynamic flow enclosure technique was used and gas samples were collected onto Tenax-GC/Carboseive cartridges, which were then attached to the sample injection system in the gas chromatograph (GC). Eluting compounds were analysed using a flame ionisation detector (FID). Out of the nine tree species, isoprene emission was found in six species (Eucalyptus sp., Ficus benghalensis, Ficus religiosa, Mangifera indica, Melia azedarach, and Syzygium jambolanum), whereas, in the remaining three tree species (Alstonia scholaris, Azadirachta indica, and Cassia fistula) no isoprene emission was detected or the levels of emission were negligible or below the detection limit (BDL). Among six tree species, the highest hourly emission (10.2{+-}6.8 {mu}g g{sup -1} leaf dry weight, average of five seasons) was observed in Ficus religiosa, while minimum emission was from Melia azedarach (2.2{+-}4.9 {mu}g g{sup -1} leaf dry weight, average of five seasons). Isoprene emission (average of six species), over five seasons, was found to vary between 3.9 and 8.5 {mu}g g{sup -1} leaf dry weight during the rainy season. In addition, significant diurnal variation in isoprene emission was observed in each species. The preliminary estimate made in this study on the annual biogenic VOC emission from India may probably be the first of its kind from this part of the world. - Isoprene flux (diurnal and seasonal) from some tropical tree species was estimated and a regional comparison was made.

  7. Region effects influence local tree species diversity.

    Science.gov (United States)

    Ricklefs, Robert E; He, Fangliang

    2016-01-19

    Global patterns of biodiversity reflect both regional and local processes, but the relative importance of local ecological limits to species coexistence, as influenced by the physical environment, in contrast to regional processes including species production, dispersal, and extinction, is poorly understood. Failure to distinguish regional influences from local effects has been due, in part, to sampling limitations at small scales, environmental heterogeneity within local or regional samples, and incomplete geographic sampling of species. Here, we use a global dataset comprising 47 forest plots to demonstrate significant region effects on diversity, beyond the influence of local climate, which together explain more than 92% of the global variation in local forest tree species richness. Significant region effects imply that large-scale processes shaping the regional diversity of forest trees exert influence down to the local scale, where they interact with local processes to determine the number of coexisting species.

  8. Identifying the rooted species tree from the distribution of unrooted gene trees under the coalescent.

    Science.gov (United States)

    Allman, Elizabeth S; Degnan, James H; Rhodes, John A

    2011-06-01

    Gene trees are evolutionary trees representing the ancestry of genes sampled from multiple populations. Species trees represent populations of individuals-each with many genes-splitting into new populations or species. The coalescent process, which models ancestry of gene copies within populations, is often used to model the probability distribution of gene trees given a fixed species tree. This multispecies coalescent model provides a framework for phylogeneticists to infer species trees from gene trees using maximum likelihood or Bayesian approaches. Because the coalescent models a branching process over time, all trees are typically assumed to be rooted in this setting. Often, however, gene trees inferred by traditional phylogenetic methods are unrooted. We investigate probabilities of unrooted gene trees under the multispecies coalescent model. We show that when there are four species with one gene sampled per species, the distribution of unrooted gene tree topologies identifies the unrooted species tree topology and some, but not all, information in the species tree edges (branch lengths). The location of the root on the species tree is not identifiable in this situation. However, for 5 or more species with one gene sampled per species, we show that the distribution of unrooted gene tree topologies identifies the rooted species tree topology and all its internal branch lengths. The length of any pendant branch leading to a leaf of the species tree is also identifiable for any species from which more than one gene is sampled.

  9. Multiple Phytophthora species associated with a single riparian ecosystem in South Africa.

    Science.gov (United States)

    Nagel, Jan H; Slippers, Bernard; Wingfield, Michael J; Gryzenhout, Marieka

    2015-01-01

    The diversity of Phytophthora spp. in rivers and riparian ecosystems has received considerable international attention, although little such research has been conducted in South Africa. This study determined the diversity of Phytophthora spp. within a single river in Gauteng province of South Africa. Samples were collected over 1 y including biweekly river baiting with Rhododendron indicum leaves. Phytophthora isolates were identified with phylogenetic analyses of sequences for the internal transcribed spacer (ITS) region of the ribosomal DNA and the mitochondrial cytochrome oxidase c subunit I (coxI) gene. Eight Phytophthora spp. were identified, including a new taxon, P. taxon Sisulu-river, and two hybrid species from Cooke's ITS clade 6. Of these, species from Clade 6 were the most abundant, including P. chlamydospora and P. lacustris. Species residing in Clade 2 also were encountered, including P. multivora, P. plurivora and P. citrophthora. The detection of eight species in this investigation of Phytophthora diversity in a single riparian river ecosystem in northern South Africa adds to the known diversity of this genus in South Africa and globally. © 2015 by The Mycological Society of America.

  10. Species diversity and qualitative assessment of ground beetles (Coleoptera: Carabidae) in three riparian habitats.

    Science.gov (United States)

    Michels, G J; Carney, V A; Jones, E N; Pollock, D A

    2010-06-01

    In a 3-yr study involving saltcedar-free, saltcedar-infested, and burned habitats in a riparian area at Lake Meredith, TX, the number of carabid species collected, diversity indices, and indicator species varied significantly among habitats. A 3-yr average of 15, 14, and 24 carabid species were collected from the saltcedar-free, saltcedar-infested, and burned habitats, respectively. Values for species richness, Shannon's and Simpson's diversity indices, and evenness index for pooled data collected from 2005 to 2007 were higher in the burned habitat followed by the saltcedar-free habitat and the saltcedar-infested habitat. Within-year parameters across the three habitats generally followed the pooled data results with some variation. Nonmetric multidimensional scaling analyses clearly indicated groups of carabid species preferred specific habitats. Five species in the burned area had indicator species percentage values >50% (Agonum punctiforme, Agonum texanum, Brachinus alternans, Harpalus pensylvanicus, and Poecilus chalcites). In the saltcedar-infested and saltcedar-free habitats, only one species in each habitat had indicator species percentage values that exceeded 50%: Calathus opaculus and Cicindela punctulata punctulata, respectively.

  11. Tree Species Identity Shapes Earthworm Communities

    Directory of Open Access Journals (Sweden)

    Stephanie Schelfhout

    2017-03-01

    Full Text Available Earthworms are key organisms in forest ecosystems because they incorporate organic material into the soil and affect the activity of other soil organisms. Here, we investigated how tree species affect earthworm communities via litter and soil characteristics. In a 36-year old common garden experiment, replicated six times over Denmark, six tree species were planted in blocks: sycamore maple (Acer pseudoplatanus, beech (Fagus sylvatica, ash (Fraxinus excelsior, Norway spruce (Picea abies, pedunculate oak (Quercus robur and lime (Tilia cordata. We studied the chemical characteristics of soil and foliar litter, and determined the forest floor turnover rate and the density and biomass of the earthworm species occurring in the stands. Tree species significantly affected earthworm communities via leaf litter and/or soil characteristics. Anecic earthworms were abundant under Fraxinus, Acer and Tilia, which is related to calcium-rich litter and low soil acidification. Epigeic earthworms were indifferent to calcium content in leaf litter and were shown to be mainly related to soil moisture content and litter C:P ratios. Almost no earthworms were found in Picea stands, likely because of the combined effects of recalcitrant litter, low pH and low soil moisture content.

  12. Small mammals in saltcedar (Tamarix ramosissima) - invaded and native riparian habitats of the western Great Basin

    Science.gov (United States)

    Invasive saltcedar species have replaced native riparian trees on numerous river systems throughout the western US, raising concerns about how this habitat conversion may affect wildlife. For periods ranging from 1-10 years, small mammal populations were monitored at six riparian sites impacted by s...

  13. Dendroclimatic signals deduced from riparian versus upland forest interior pines in North Karelia, Finland

    DEFF Research Database (Denmark)

    Helama, Samuli; Arentoft, Birgitte W.; Collin-Haubensak, Olivier

    2013-01-01

    Radial growth of boreal tree species is only rarely studied in riparian habitats. Here we investigated chronologies of earlywood, latewood, and annual ring widths and blue intensity (BI; a surrogate to latewood density) from riparian lake shore and upland forest interior pines (Pinus sylvestris L...

  14. An estimate of the number of tropical tree species

    DEFF Research Database (Denmark)

    Slik, J. W Ferry; Arroyo-Rodríguez, Víctor; Aiba, Shin Ichiro

    2015-01-01

    The high species richness of tropical forests has long been recognized, yet there remains substantial uncertainty regarding the actual number of tropical tree species. Using a pantropical tree inventory database from closed canopy forests, consisting of 657,630 trees belonging to 11,371 species, ...

  15. Potential effects of forestry operations and associated best management practices on riparian wildlife species in the southeastern United States

    Science.gov (United States)

    Brooke M. Warrington; W. Michael Aust; Scott M. Barrett; W. Mark Ford; M. Chad Bolding; Andy Dolloff

    2016-01-01

    The US Fish and Wildlife Service is considering the addition of 374 riparian and aquatic species in the southeastern United States to the federal Threated and Endangered Species List. This recommendation is a result of a 2011 petition, which recognized forest operations as having negative effects on 51 percent of the listed species, citing research conducted in the...

  16. Early physiological flood tolerance is followed by slow post-flooding root recovery in the dryland riparian tree Eucalyptus camaldulensis subsp. refulgens.

    Science.gov (United States)

    Argus, R E; Colmer, T D; Grierson, P F

    2015-06-01

    We investigated physiological and morphological responses to flooding and recovery in Eucalyptus camaldulensis subsp. refulgens, a riparian tree species from a dryland region prone to intense episodic floods. Seedlings in soil flooded for 88 d produced extensive adventitious roots, displayed stem hypertrophy (stem diameter increased by 93%) and increased root porosity owing to aerenchyma formation. Net photosynthesis (Pn) and stomatal conductance (gs) were maintained for at least 2 weeks of soil flooding, contrasting with previous studies of other subspecies of E. camaldulensis. Gradual declines followed in both gs (30% less than controls) and Pn (19% less). Total leaf soluble sugars did not differ between flooded and control plants. Root mass did not recover 32 d after flooding ceased, but gs was not lower than controls, suggesting the root system was able to functionally compensate. However, the limited root growth during recovery after flooding was surprising given the importance of extensive root systems in dryland environments. We conclude that early flood tolerance could be an adaptation to capitalize on scarce water resources in a water-limited environment. Overall, our findings highlight the need to assess flooding responses in relation to a species' fitness for particular flood regimes or ecological niches. © 2014 John Wiley & Sons Ltd.

  17. Tree species effect on the redistribution of soil metals

    NARCIS (Netherlands)

    Mertens, J.; Nevel, Van L.; Schrijver, De A.; Piesschaert, F.; Oosterbaan, A.; Tack, F.M.G.; Verheyen, K.

    2007-01-01

    Phytostabilization of metals using trees is often promoted although the influence of different tree species on the mobilization of metals is not yet clear. Soil and biomass were sampled 33 years after planting four tree species (Quercus robur, Fraxinus excelsior, Acer pseudoplatanus, Populus

  18. Distribution characteristics of mineral elements in tree Species from ...

    African Journals Online (AJOL)

    Tree species populations were 44 in Akyaakrom (AS), 29 in Dopiri (DS), and families were 18 in AS and 16 in DS. Tree densities were 121 and 99 in AS and DS, respectively, in 0.57 ha. In terms of tree species population, diversity and density, AS was superior to DS. The distribution of major mineral elements in the leaves ...

  19. Inferring species trees from incongruent multi-copy gene trees using the Robinson-Foulds distance

    Science.gov (United States)

    2013-01-01

    Background Constructing species trees from multi-copy gene trees remains a challenging problem in phylogenetics. One difficulty is that the underlying genes can be incongruent due to evolutionary processes such as gene duplication and loss, deep coalescence, or lateral gene transfer. Gene tree estimation errors may further exacerbate the difficulties of species tree estimation. Results We present a new approach for inferring species trees from incongruent multi-copy gene trees that is based on a generalization of the Robinson-Foulds (RF) distance measure to multi-labeled trees (mul-trees). We prove that it is NP-hard to compute the RF distance between two mul-trees; however, it is easy to calculate this distance between a mul-tree and a singly-labeled species tree. Motivated by this, we formulate the RF problem for mul-trees (MulRF) as follows: Given a collection of multi-copy gene trees, find a singly-labeled species tree that minimizes the total RF distance from the input mul-trees. We develop and implement a fast SPR-based heuristic algorithm for the NP-hard MulRF problem. We compare the performance of the MulRF method (available at http://genome.cs.iastate.edu/CBL/MulRF/) with several gene tree parsimony approaches using gene tree simulations that incorporate gene tree error, gene duplications and losses, and/or lateral transfer. The MulRF method produces more accurate species trees than gene tree parsimony approaches. We also demonstrate that the MulRF method infers in minutes a credible plant species tree from a collection of nearly 2,000 gene trees. Conclusions Our new phylogenetic inference method, based on a generalized RF distance, makes it possible to quickly estimate species trees from large genomic data sets. Since the MulRF method, unlike gene tree parsimony, is based on a generic tree distance measure, it is appealing for analyses of genomic data sets, in which many processes such as deep coalescence, recombination, gene duplication and losses as

  20. The Role of Native Tree Species on Leaf Breakdown Dynamics of the Invasive Tree of Heaven ( Ailanthus altissima) in an Urban Stream

    Science.gov (United States)

    Swan, C.; Healey, B.

    2005-05-01

    Anthropogenic disturbance of ecosystem processes is increasingly being explored in urban settings. One profound impact is the striking increase in the distribution of invasive plant species. For example, Tree of Heaven (Ailanthus altissima, TOH), introduced into the U.S. from Asia in 1784, is a successful colonist of recently deforested habitats. As a result, remnant patches in urban ecosystems have become overrun with this tree species, excluding native species via fast growth and allelopathy. While suffering from human-induced degradation, urban streams still support food webs that function to process riparian-derived organic matter (e.g., leaves, wood). The purpose of this study was to (1) estimate leaf litter breakdown of native tree leaves and those of TOH in an urban stream, (2) study the detritivore feeding rate of the same leaf species, and (3) determine if increasing native species richness of leaf litter can alter breakdown of TOH leaves. Field manipulations of leaf pack composition were done in a highly urbanized stream (>30% upstream urban land use) in Baltimore County, Maryland, USA. This was complimented by a series of laboratory feeding experiments employing similar leaf treatments and local shredding invertebrate taxa. Breakdown of TOH alone was extremely rapid, significantly exceeding that of all native tree species employed. Furthermore, mixing TOH with native tree species, red maple and white oak, substantially reduced TOH decay compared to decay of TOH alone. However, supporting laboratory studies showed that TOH was a preferred resource by shredding invertebrates over all native species. Subsequent analysis of the structural integrity of all leaf species revealed that TOH was the least resistant to force, possibly explaining the counterintuitive decrease of TOH decay in mixtures. We interpret this as meaning the stream invertebrates, while preferring to consume TOH, appeared not to influence TOH decay in mixtures with native species. Instead

  1. Seeing the Forest through the Trees: Citizen Scientists Provide Critical Data to Refine Aboveground Carbon Estimates in Restored Riparian Forests

    Science.gov (United States)

    Viers, J. H.

    2013-12-01

    Integrating citizen scientists into ecological informatics research can be difficult due to limited opportunities for meaningful engagement given vast data streams. This is particularly true for analysis of remotely sensed data, which are increasingly being used to quantify ecosystem services over space and time, and to understand how land uses deliver differing values to humans and thus inform choices about future human actions. Carbon storage and sequestration are such ecosystem services, and recent environmental policy advances in California (i.e., AB 32) have resulted in a nascent carbon market that is helping fuel the restoration of riparian forests in agricultural landscapes. Methods to inventory and monitor aboveground carbon for market accounting are increasingly relying on hyperspatial remotely sensed data, particularly the use of light detection and ranging (LiDAR) technologies, to estimate biomass. Because airborne discrete return LiDAR can inexpensively capture vegetation structural differences at high spatial resolution ( 1000 ha), its use is rapidly increasing, resulting in vast stores of point cloud and derived surface raster data. While established algorithms can quantify forest canopy structure efficiently, the highly complex nature of native riparian forests can result in highly uncertain estimates of biomass due to differences in composition (e.g., species richness, age class) and structure (e.g., stem density). This study presents the comparative results of standing carbon estimates refined with field data collected by citizen scientists at three different sites, each capturing a range of agricultural, remnant forest, and restored forest cover types. These citizen science data resolve uncertainty in composition and structure, and improve allometric scaling models of biomass and thus estimates of aboveground carbon. Results indicate that agricultural land and horticulturally restored riparian forests store similar amounts of aboveground carbon

  2. Vegetation development following stream/river restoration: more natural fluvial dynamics and morphology, return of aquatic and riparian plant species?

    Science.gov (United States)

    Soons, M. B.

    2012-04-01

    After centuries of human interventions in stream/river dynamics and morphology aimed at optimizing landscapes for agricultural and industrial purposes, new insights have inspired water managers to try and combine stream and river ecosystem functions with the conservation of biodiversity. Around the world, aquatic and riparian species have declined strongly due to pollution, destruction and fragmentation of their habitat, so that biodiversity conservation initiatives primarily focus on habitat restoration. In the past decades many stream and river restoration projects have been carried out and often hydrological dynamics and morphology have been restored to a more natural state. However, the successful restoration of aquatic and riparian habitats very often failed to result in restoration of their biodiversity. This lack of success from a biodiversity conservation perspective is usually attributed to 'dispersal limitation', meaning that the habitat may be restored, but species fail to reach the site and re-colonize it. Especially re-colonization by aquatic and riparian plant species is important, as such species function as ecosystem engineers: their presence alters fluvial dynamics and morphology, generates additional habitat heterogeneity and provides habitat and food for animal species. Following minor disturbances, re-colonization is often possible through locally remaining populations, by seeds in the seed bank or by surviving plant fragments. However, following major disturbances, colonization and establishment from other source populations are necessary. This usually occurs through dispersal of seeds (and in more aquatic species also by dispersal of vegetative fragments) into the restored wetland area. As dispersal occurs predominantly over short distances and source populations of aquatic and riparian species may be lacking in the surroundings, dispersal may be a limiting factor in the development of aquatic and riparian vegetation at a restored site. But

  3. Flavanol binding of nuclei from tree species.

    Science.gov (United States)

    Feucht, W; Treutter, D; Polster, J

    2004-01-01

    Light microscopy was used to examine the nuclei of five tree species with respect to the presence of flavanols. Flavanols develop a blue colouration in the presence of a special p-dimethylaminocinnamaldehyde (DMACA) reagent that enables those nuclei loaded with flavanols to be recognized. Staining of the nuclei was most pronounced in both Tsuga canadensis and Taxus baccata, variable in Metasequoia glyptostroboides, faint in Coffea arabica and minimal in Prunus avium. HPLC analysis showed that the five species contained substantial amounts of different flavanols such as catechin, epicatechin and proanthocyanidins. Quantitatively, total flavanols were quite different among the species. The nuclei themselves, as studied in Tsuga seed wings, were found to contain mainly catechin, much lower amounts of epicatechin and traces of proanthocyanidins. Blue-coloured nuclei located centrally in small cells were often found to maximally occupy up to 90% of a cell's radius, and the surrounding small rim of cytoplasm was visibly free of flavanols. A survey of 34 gymnosperm and angiosperm species indicated that the first group has much higher nuclear binding capacities for flavanols than the second group.

  4. Incorporating climate change and exotic species into forecasts of riparian forest distribution.

    Directory of Open Access Journals (Sweden)

    Dana H Ikeda

    Full Text Available We examined the impact climate change (CC will have on the availability of climatically suitable habitat for three native and one exotic riparian species. Due to its increasing prevalence in arid regions throughout the western US, we predicted that an exotic species, Tamarix, would have the greatest increase in suitable habitat relative to native counterparts under CC. We used an ecological niche model to predict range shifts of Populus fremontii, Salix gooddingii, Salix exigua and Tamarix, from present day to 2080s, under five general circulation models and one climate change scenario (A1B. Four major findings emerged. 1 Contrary to our original hypothesis, P. fremontii is projected to have the greatest increase in suitable habitat under CC, followed closely by Tamarix. 2 Of the native species, S. gooddingii and S. exigua showed the greatest loss in predicted suitable habitat due to CC. 3 Nearly 80 percent of future P. fremontii and Salix habitat is predicted to be affected by either CC or Tamarix by the 2080s. 4 By the 2080s, 20 percent of S. gooddingii habitat is projected to be affected by both Tamarix and CC concurrently, followed by S. exigua (19 percent and P. fremontii (13 percent. In summary, while climate change alone will negatively impact both native willow species, Tamarix is likely to affect a larger portion of all three native species' distributions. We discuss these and other results in the context of prioritizing restoration and conservation efforts to optimize future productivity and biodiversity. As we are accounting for only direct effects of CC and Tamarix on native habitat, we present a possible hierarchy of effects- from the direct to the indirect- and discuss the potential for the indirect to outweigh the direct effects. Our results highlight the need to account for simultaneous challenges in the face of CC.

  5. Mycorrhizal association of some agroforestry tree species in two ...

    African Journals Online (AJOL)

    Mycorrhizal colonization of different agroforestry tree species in two social forestry nurseries was investigated. Percentage of Arbuscular mycorrhizal (AM) infection, number of resting spores and AM fungi species varies both in tree species as well as in two different nurseries. This variation is attributed to various factors such ...

  6. Ethnobotanical survey of tree species used for wound healing in ...

    African Journals Online (AJOL)

    Seventy-one plants out of which sixty-five were tree species belonging to thirty angiosperm families were identified as plant species used for the treatment of wound and related skin disorders. Some of the most frequently used tree species mentioned by the respondents are: Khaya grandifoliola C. D. C., Vitellaria paradoxa ...

  7. An Estimate Of The Number Of Tropical Tree Species.

    OpenAIRE

    Slik, J W Ferry; Arroyo-Rodríguez, Víctor; Aiba, Shin-Ichiro; Alvarez-Loayza, Patricia; Alves, Luciana F; Ashton, Peter; Balvanera, Patricia; Bastian, Meredith L; Bellingham, Peter J; van den Berg, Eduardo; Bernacci, Luis; da Conceição Bispo, Polyanna; Blanc, Lilian; Böhning-Gaese, Katrin; Boeckx, Pascal

    2016-01-01

    The high species richness of tropical forests has long been recognized, yet there remains substantial uncertainty regarding the actual number of tropical tree species. Using a pantropical tree inventory database from closed canopy forests, consisting of 657,630 trees belonging to 11,371 species, we use a fitted value of Fisher's alpha and an approximate pantropical stem total to estimate the minimum number of tropical forest tree species to fall between similar to 40,000 and similar to 53,000...

  8. Species replacement by a nonnative salmonid alters ecosystem function by reducing prey subsidies that support riparian spiders

    Science.gov (United States)

    Benjamin, J.R.; Fausch, K.D.; Baxter, C.V.

    2011-01-01

    Replacement of a native species by a nonnative can have strong effects on ecosystem function, such as altering nutrient cycling or disturbance frequency. Replacements may cause shifts in ecosystem function because nonnatives establish at different biomass, or because they differ from native species in traits like foraging behavior. However, no studies have compared effects of wholesale replacement of a native by a nonnative species on subsidies that support consumers in adjacent habitats, nor quantified the magnitude of these effects. We examined whether streams invaded by nonnative brook trout (Salvelinus fontinalis) in two regions of the Rocky Mountains, USA, produced fewer emerging adult aquatic insects compared to paired streams with native cutthroat trout (Oncorhynchus clarkii), and whether riparian spiders that depend on these prey were less abundant along streams with lower total insect emergence. As predicted, emergence density was 36% lower from streams with the nonnative fish. Biomass of brook trout was higher than the cutthroat trout they replaced, but even after accounting for this difference, emergence was 24% lower from brook trout streams. More riparian spiders were counted along streams with greater total emergence across the water surface. Based on these results, we predicted that brook trout replacement would result in 6-20% fewer spiders in the two regions. When brook trout replace cutthroat trout, they reduce cross-habitat resource subsidies and alter ecosystem function in stream-riparian food webs, not only owing to increased biomass but also because traits apparently differ from native cutthroat trout. ?? 2011 Springer-Verlag.

  9. Microsatellite Primers Identified by 454 Sequencing in the Floodplain Tree Species Eucalyptus victrix (Myrtaceae

    Directory of Open Access Journals (Sweden)

    Paul G. Nevill

    2013-05-01

    Full Text Available Premise of the study: Microsatellite primers were developed for Eucalyptus victrix (Myrtaceae to evaluate the population and spatial genetic structure of this widespread northwestern Australian riparian tree species, which may be impacted by hydrological changes associated with mining activity. Methods and Results: 454 GS-FLX shotgun sequencing was used to obtain 1895 sequences containing putative microsatellite motifs. Ten polymorphic microsatellite loci were identified and screened for variation in individuals from two populations in the Pilbara region. Observed heterozygosities ranged from 0.44 to 0.91 (mean: 0.66 and the number of alleles per locus ranged from five to 25 (average: 11. Conclusions: These microsatellite loci will be useful in future studies of population and spatial genetic structure in E. victrix, and inform the development of seed sourcing strategies for the species.

  10. An estimate of the number of tropical tree species

    Science.gov (United States)

    Slik, J. W. Ferry; Arroyo-Rodríguez, Víctor; Aiba, Shin-Ichiro; Alvarez-Loayza, Patricia; Alves, Luciana F.; Ashton, Peter; Balvanera, Patricia; Bastian, Meredith L.; Bellingham, Peter J.; van den Berg, Eduardo; Bernacci, Luis; da Conceição Bispo, Polyanna; Blanc, Lilian; Böhning-Gaese, Katrin; Boeckx, Pascal; Bongers, Frans; Boyle, Brad; Bradford, Matt; Brearley, Francis Q.; Breuer-Ndoundou Hockemba, Mireille; Bunyavejchewin, Sarayudh; Calderado Leal Matos, Darley; Castillo-Santiago, Miguel; Catharino, Eduardo L. M.; Chai, Shauna-Lee; Chen, Yukai; Colwell, Robert K.; Chazdon, Robin L.; Clark, Connie; Clark, David B.; Clark, Deborah A.; Culmsee, Heike; Damas, Kipiro; Dattaraja, Handanakere S.; Dauby, Gilles; Davidar, Priya; DeWalt, Saara J.; Doucet, Jean-Louis; Duque, Alvaro; Durigan, Giselda; Eichhorn, Karl A. O.; Eisenlohr, Pedro V.; Eler, Eduardo; Ewango, Corneille; Farwig, Nina; Feeley, Kenneth J.; Ferreira, Leandro; Field, Richard; de Oliveira Filho, Ary T.; Fletcher, Christine; Forshed, Olle; Franco, Geraldo; Fredriksson, Gabriella; Gillespie, Thomas; Gillet, Jean-François; Amarnath, Giriraj; Griffith, Daniel M.; Grogan, James; Gunatilleke, Nimal; Harris, David; Harrison, Rhett; Hector, Andy; Homeier, Jürgen; Imai, Nobuo; Itoh, Akira; Jansen, Patrick A.; Joly, Carlos A.; de Jong, Bernardus H. J.; Kartawinata, Kuswata; Kearsley, Elizabeth; Kelly, Daniel L.; Kenfack, David; Kessler, Michael; Kitayama, Kanehiro; Kooyman, Robert; Larney, Eileen; Laumonier, Yves; Laurance, Susan; Laurance, William F.; Lawes, Michael J.; do Amaral, Ieda Leao; Letcher, Susan G.; Lindsell, Jeremy; Lu, Xinghui; Mansor, Asyraf; Marjokorpi, Antti; Martin, Emanuel H.; Meilby, Henrik; Melo, Felipe P. L.; Metcalfe, Daniel J.; Medjibe, Vincent P.; Metzger, Jean Paul; Millet, Jerome; Mohandass, D.; Montero, Juan C.; de Morisson Valeriano, Márcio; Mugerwa, Badru; Nagamasu, Hidetoshi; Nilus, Reuben; Ochoa-Gaona, Susana; Onrizal; Page, Navendu; Parolin, Pia; Parren, Marc; Parthasarathy, Narayanaswamy; Paudel, Ekananda; Permana, Andrea; Piedade, Maria T. F.; Pitman, Nigel C. A.; Poorter, Lourens; Poulsen, Axel D.; Poulsen, John; Powers, Jennifer; Prasad, Rama C.; Puyravaud, Jean-Philippe; Razafimahaimodison, Jean-Claude; Reitsma, Jan; dos Santos, João Roberto; Roberto Spironello, Wilson; Romero-Saltos, Hugo; Rovero, Francesco; Rozak, Andes Hamuraby; Ruokolainen, Kalle; Rutishauser, Ervan; Saiter, Felipe; Saner, Philippe; Santos, Braulio A.; Santos, Fernanda; Sarker, Swapan K.; Satdichanh, Manichanh; Schmitt, Christine B.; Schöngart, Jochen; Schulze, Mark; Suganuma, Marcio S.; Sheil, Douglas; da Silva Pinheiro, Eduardo; Sist, Plinio; Stevart, Tariq; Sukumar, Raman; Sun, I.-Fang; Sunderland, Terry; Suresh, H. S.; Suzuki, Eizi; Tabarelli, Marcelo; Tang, Jangwei; Targhetta, Natália; Theilade, Ida; Thomas, Duncan W.; Tchouto, Peguy; Hurtado, Johanna; Valencia, Renato; van Valkenburg, Johan L. C. H.; Van Do, Tran; Vasquez, Rodolfo; Verbeeck, Hans; Adekunle, Victor; Vieira, Simone A.; Webb, Campbell O.; Whitfeld, Timothy; Wich, Serge A.; Williams, John; Wittmann, Florian; Wöll, Hannsjoerg; Yang, Xiaobo; Adou Yao, C. Yves; Yap, Sandra L.; Yoneda, Tsuyoshi; Zahawi, Rakan A.; Zakaria, Rahmad; Zang, Runguo; de Assis, Rafael L.; Garcia Luize, Bruno; Venticinque, Eduardo M.

    2015-01-01

    The high species richness of tropical forests has long been recognized, yet there remains substantial uncertainty regarding the actual number of tropical tree species. Using a pantropical tree inventory database from closed canopy forests, consisting of 657,630 trees belonging to 11,371 species, we use a fitted value of Fisher’s alpha and an approximate pantropical stem total to estimate the minimum number of tropical forest tree species to fall between ∼40,000 and ∼53,000, i.e., at the high end of previous estimates. Contrary to common assumption, the Indo-Pacific region was found to be as species-rich as the Neotropics, with both regions having a minimum of ∼19,000–25,000 tree species. Continental Africa is relatively depauperate with a minimum of ∼4,500–6,000 tree species. Very few species are shared among the African, American, and the Indo-Pacific regions. We provide a methodological framework for estimating species richness in trees that may help refine species richness estimates of tree-dependent taxa. PMID:26034279

  11. Efeito de um protetor físico na semeadura direta de duas espécies florestais em área de domínio ciliar The effects of a shelter upon seeding of two forest tree species in a riparian area

    Directory of Open Access Journals (Sweden)

    Ubirajara Contro Malavasi

    2010-10-01

    Full Text Available O ensaio avaliou o uso de uma garrafa plástica tipo PET de 2.000 mL como protetor físico na semeadura direta de Enterolobium contortisiliquum (Vell. Morong. e Peltophorum dubium (Spreng. Taub. em área de domínio ciliar no Oeste do Paraná. Nas semeaduras executadas no outono, inverno e primavera, utilizaram-se quatro sementes pré-embebidas de cada espécie por cova. As avaliações constaram da percentagem acumulada de plântulas vivas por parcela 30 dias após a semeadura (emergência, da percentagem de plântulas vivas 90 dias após a semeadura (sobrevivência e da percentagem de covas por parcela (formada por 15 covas com pelo menos uma plântula viva 90 dias após a semeadura (densidade populacional, assim como da altura e diâmetro do colo das plântulas. A semeadura realizada no outono resultou em 45% de plântulas de timburi vivas 30 dias após a semeadura, enquanto a emergência de plântulas de canafistula (média de 75,5% foi indiferente às épocas de semeadura. O uso do protetor aumentou a emergência de plântulas das espécies estudadas quando semeadas no outono (12% ou no inverno (10%, assim como na sobrevivência da semeadura da primavera, e na densidade populacional nas semeaduras de outono e da primavera em covas semeadas com canafístula.The study compared the effects of a plastic bottle as a shelter on direct spot seeding of two forest species. Four water soaked seeds of Enterolobium contortisiliquum (Vell. Morong. (timburi or Peltophorum dubium (Spreng. Taub. (canafistula were spot seeded in autumn, winter or spring in a riparian area located on the western portion of Parana state, Brazil. Calculation of population variables included accumulative percentage of live germinants 30 days after seeding (emergency, percentage of live seedlings 90 days after seeding (survival, percentage of seeded spots per plot (formed by 15 seeding spots with at least one live seedling (population density, as well as seedling height and

  12. Moose?tree interactions: rebrowsing is common across tree species

    OpenAIRE

    Mathisen, Karen Marie; Milner, Jos M.; Skarpe, Christina

    2017-01-01

    Background Plant strategies to resist herbivory include tolerance and avoidance. Tolerance strategies, such as rapid regrowth which increases the palatability of new shoots, can lead to positive feedback loops between plants and herbivores. An example of such a positive feedback occurs when moose (Alces alces) browse trees in boreal forests. We described the degree of change in tree morphology that accumulated over time in response to repeated browsing by moose, using an index of accumulated ...

  13. Tree architecture and life-history strategies across 200 co-occurring tropical tree species

    NARCIS (Netherlands)

    Iida, Y.; Kohyama, T.S.; Kubo, T.; Kassim, A.R.; Poorter, L.; Sterck, F.J.; Potts, M.D.

    2011-01-01

    1. Tree architecture is thought to allow species to partition horizontal and vertical light gradients in the forest canopy. Tree architecture is closely related to light capture, carbon gain and the efficiency with which trees reach the canopy. Previous studies that investigated how light gradients

  14. Understanding recruitment failure in tropical tree species: Insights from a tree ring study

    NARCIS (Netherlands)

    Vlam, M.; Baker, P.J.; Bunyavejchewin, S.; Mohren, G.M.J.; Zuidema, P.A.

    2014-01-01

    Many tropical tree species have population structures that exhibit strong recruitment failure. While the presence of adult trees indicates that appropriate regeneration conditions occurred in the past, it is often unclear why small individuals are absent. Knowing how, when and where these tree

  15. STBase: one million species trees for comparative biology.

    Science.gov (United States)

    McMahon, Michelle M; Deepak, Akshay; Fernández-Baca, David; Boss, Darren; Sanderson, Michael J

    2015-01-01

    Comprehensively sampled phylogenetic trees provide the most compelling foundations for strong inferences in comparative evolutionary biology. Mismatches are common, however, between the taxa for which comparative data are available and the taxa sampled by published phylogenetic analyses. Moreover, many published phylogenies are gene trees, which cannot always be adapted immediately for species level comparisons because of discordance, gene duplication, and other confounding biological processes. A new database, STBase, lets comparative biologists quickly retrieve species level phylogenetic hypotheses in response to a query list of species names. The database consists of 1 million single- and multi-locus data sets, each with a confidence set of 1000 putative species trees, computed from GenBank sequence data for 413,000 eukaryotic taxa. Two bodies of theoretical work are leveraged to aid in the assembly of multi-locus concatenated data sets for species tree construction. First, multiply labeled gene trees are pruned to conflict-free singly-labeled species-level trees that can be combined between loci. Second, impacts of missing data in multi-locus data sets are ameliorated by assembling only decisive data sets. Data sets overlapping with the user's query are ranked using a scheme that depends on user-provided weights for tree quality and for taxonomic overlap of the tree with the query. Retrieval times are independent of the size of the database, typically a few seconds. Tree quality is assessed by a real-time evaluation of bootstrap support on just the overlapping subtree. Associated sequence alignments, tree files and metadata can be downloaded for subsequent analysis. STBase provides a tool for comparative biologists interested in exploiting the most relevant sequence data available for the taxa of interest. It may also serve as a prototype for future species tree oriented databases and as a resource for assembly of larger species phylogenies from precomputed

  16. STBase: one million species trees for comparative biology.

    Directory of Open Access Journals (Sweden)

    Michelle M McMahon

    Full Text Available Comprehensively sampled phylogenetic trees provide the most compelling foundations for strong inferences in comparative evolutionary biology. Mismatches are common, however, between the taxa for which comparative data are available and the taxa sampled by published phylogenetic analyses. Moreover, many published phylogenies are gene trees, which cannot always be adapted immediately for species level comparisons because of discordance, gene duplication, and other confounding biological processes. A new database, STBase, lets comparative biologists quickly retrieve species level phylogenetic hypotheses in response to a query list of species names. The database consists of 1 million single- and multi-locus data sets, each with a confidence set of 1000 putative species trees, computed from GenBank sequence data for 413,000 eukaryotic taxa. Two bodies of theoretical work are leveraged to aid in the assembly of multi-locus concatenated data sets for species tree construction. First, multiply labeled gene trees are pruned to conflict-free singly-labeled species-level trees that can be combined between loci. Second, impacts of missing data in multi-locus data sets are ameliorated by assembling only decisive data sets. Data sets overlapping with the user's query are ranked using a scheme that depends on user-provided weights for tree quality and for taxonomic overlap of the tree with the query. Retrieval times are independent of the size of the database, typically a few seconds. Tree quality is assessed by a real-time evaluation of bootstrap support on just the overlapping subtree. Associated sequence alignments, tree files and metadata can be downloaded for subsequent analysis. STBase provides a tool for comparative biologists interested in exploiting the most relevant sequence data available for the taxa of interest. It may also serve as a prototype for future species tree oriented databases and as a resource for assembly of larger species phylogenies

  17. Tree species composition within Kano State University of science ...

    African Journals Online (AJOL)

    The study accessed the tree species composition within the Kano State University of Science and Technology Wudil, Kano State, Nigeria with the view of providing information that will help in the management and conservation of tree species within the campus. The study area was stratified into four (4) sections from which ...

  18. Are temperate canopy spiders tree-species specific?

    Science.gov (United States)

    Mupepele, Anne-Christine; Müller, Tobias; Dittrich, Marcus; Floren, Andreas

    2014-01-01

    Arboreal spiders in deciduous and coniferous trees were investigated on their distribution and diversity. Insecticidal knock-down was used to comprehensively sample spiders from 175 trees from 2001 to 2003 in the Białowieża forest and three remote forests in Poland. We identified 140 species from 9273 adult spiders. Spider communities were distinguished between deciduous and coniferous trees. The richest fauna was collected from Quercus where beta diversity was also highest. A tree-species-specific pattern was clearly observed for Alnus, Carpinus, Picea and Pinus trees and also for those tree species that were fogged in only four or three replicates, namely Betula and Populus. This hitherto unrecognised association was mainly due to the community composition of common species identified in a Dufrene-Legendre indicator species analysis. It was not caused by spatial or temporal autocorrelation. Explaining tree-species specificity for generalist predators like spiders is difficult and has to involve physical and ecological tree parameters like linkage with the abundance of prey species. However, neither did we find a consistent correlation of prey group abundances with spiders nor could differences in spider guild composition explain the observed pattern. Our results hint towards the importance of deterministic mechanisms structuring communities of generalist canopy spiders although the casual relationship is not yet understood.

  19. Minimum variance rooting of phylogenetic trees and implications for species tree reconstruction.

    Science.gov (United States)

    Mai, Uyen; Sayyari, Erfan; Mirarab, Siavash

    2017-01-01

    Phylogenetic trees inferred using commonly-used models of sequence evolution are unrooted, but the root position matters both for interpretation and downstream applications. This issue has been long recognized; however, whether the potential for discordance between the species tree and gene trees impacts methods of rooting a phylogenetic tree has not been extensively studied. In this paper, we introduce a new method of rooting a tree based on its branch length distribution; our method, which minimizes the variance of root to tip distances, is inspired by the traditional midpoint rerooting and is justified when deviations from the strict molecular clock are random. Like midpoint rerooting, the method can be implemented in a linear time algorithm. In extensive simulations that consider discordance between gene trees and the species tree, we show that the new method is more accurate than midpoint rerooting, but its relative accuracy compared to using outgroups to root gene trees depends on the size of the dataset and levels of deviations from the strict clock. We show high levels of error for all methods of rooting estimated gene trees due to factors that include effects of gene tree discordance, deviations from the clock, and gene tree estimation error. Our simulations, however, did not reveal significant differences between two equivalent methods for species tree estimation that use rooted and unrooted input, namely, STAR and NJst. Nevertheless, our results point to limitations of existing scalable rooting methods.

  20. The ghosts of trees past: savanna trees create enduring legacies in plant species composition.

    Science.gov (United States)

    Stahlheber, Karen A; Crispin, Kimberly L; Anton, Cassidy; D'Antonio, Carla M

    2015-09-01

    Isolated trees in savannas worldwide are known to modify their local environment and interact directly with neighboring plants. Less is known about how related tree species differ in their impacts on surrounding communities, how the effects of trees vary between years, and how composition might change following loss of the tree. To address these knowledge gaps, we explored the following questions: How do savanna trees influence the surrounding composition of herbaceous plants? Is the influence of trees consistent across different species and years? How does this change following the death of the tree? We surveyed herbaceous species composition and environmental attributes surrounding living and dead evergreen and deciduous Quercus trees in California (USA) savannas across several years that differed in their total precipitation. Oak trees of all species created distinct, homogenous understory communities dominated by exotic grasses across several sites. The composition of the low-diversity understory communities showed less interannual variation than open grassland, despite a two-fold difference in precipitation between the driest and wettest year. Vegetation composition was correlated with variation in soil properties, which were strongly affected by trees. Oaks also influenced the communities beyond the edge of the crown, but this depended on site and oak species. Low-diversity understory communities persisted up to 43 years following the death of the tree. A gradual decline in the effect of trees on the physical, environment following death did not result in vegetation becoming more similar to open grassland over time. The presence of long-lasting legacies of past tree crowns highlights the difficulty of assigning control of the current distribution of herbaceous species in grassland to their contemporary environment.

  1. Global variation in woodpecker species richness shaped by tree availability

    DEFF Research Database (Denmark)

    Ilsoe, Sigrid Kistrup; Kissling, W. Daniel; Fjeldsa, Jon

    2017-01-01

    . Location: Global. Methods: We used spatial and non-spatial regressions to test for relationships between broad-scale woodpecker species richness and predictor variables describing current and deep-time availability of trees, current climate, Quaternary climate change, human impact, topographical...... a negative indirect effect on woodpecker species richness. Main conclusions: Global species richness of woodpeckers is primarily shaped by current tree cover and precipitation, reflecting a strong biotic association between woodpeckers and trees. Human influence can have a negative effect on woodpecker....... As an example, woodpeckers (Picidae) are closely associated with trees and woody habitats because of multiple morphological and ecological specializations. In this study, we test whether this strong biotic association causes woodpecker diversity to be closely linked to tree availability at a global scale...

  2. STRIDE: Species Tree Root Inference from Gene Duplication Events.

    Science.gov (United States)

    Emms, David M; Kelly, Steven

    2017-12-01

    The correct interpretation of any phylogenetic tree is dependent on that tree being correctly rooted. We present STRIDE, a fast, effective, and outgroup-free method for identification of gene duplication events and species tree root inference in large-scale molecular phylogenetic analyses. STRIDE identifies sets of well-supported in-group gene duplication events from a set of unrooted gene trees, and analyses these events to infer a probability distribution over an unrooted species tree for the location of its root. We show that STRIDE correctly identifies the root of the species tree in multiple large-scale molecular phylogenetic data sets spanning a wide range of timescales and taxonomic groups. We demonstrate that the novel probability model implemented in STRIDE can accurately represent the ambiguity in species tree root assignment for data sets where information is limited. Furthermore, application of STRIDE to outgroup-free inference of the origin of the eukaryotic tree resulted in a root probability distribution that provides additional support for leading hypotheses for the origin of the eukaryotes. © The Author 2017. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

  3. Optimal tree-stem bucking of northeastern species of China

    Science.gov (United States)

    Jingxin Wang; Chris B. LeDoux; Joseph McNeel

    2004-01-01

    An application of optimal tree-stem bucking to the northeastern tree species of China is reported. The bucking procedures used in this region are summarized, which are the basic guidelines for the optimal bucking design. The directed graph approach was adopted to generate the bucking patterns by using the network analysis labeling algorithm. A computer-based bucking...

  4. Species collapse via hybridization in Darwin's tree finches.

    Science.gov (United States)

    Kleindorfer, Sonia; O'Connor, Jody A; Dudaniec, Rachael Y; Myers, Steven A; Robertson, Jeremy; Sulloway, Frank J

    2014-03-01

    Species hybridization can lead to fitness costs, species collapse, and novel evolutionary trajectories in changing environments. Hybridization is predicted to be more common when environmental conditions change rapidly. Here, we test patterns of hybridization in three sympatric tree finch species (small tree finch Camarhynchus parvulus, medium tree finch Camarhynchus pauper, and large tree finch: Camarhynchus psittacula) that are currently recognized on Floreana Island, Galápagos Archipelago. Genetic analysis of microsatellite data from contemporary samples showed two genetic populations and one hybrid cluster in both 2005 and 2010; hybrid individuals were derived from genetic population 1 (small morph) and genetic population 2 (large morph). Females of the large and rare species were more likely to pair with males of the small common species. Finch populations differed in morphology in 1852-1906 compared with 2005/2010. An unsupervised clustering method showed (a) support for three morphological clusters in the historical tree finch sample (1852-1906), which is consistent with current species recognition; (b) support for two or three morphological clusters in 2005 with some (19%) hybridization; and (c) support for just two morphological clusters in 2010 with frequent (41%) hybridization. We discuss these findings in relation to species demarcations of Camarhynchus tree finches on Floreana Island.

  5. Herbs versus Trees: Influences on Teenagers' Knowledge of Plant Species

    Science.gov (United States)

    Lückmann, Katrin; Menzel, Susanne

    2014-01-01

    The study reports on species knowledge among German adolescents (n = 507) as: (1) self-assessed evaluation of one's species knowledge; and (2) factual knowledge about popular local herbs and trees. Besides assessing species knowledge, we were interested in whether selected demographic factors, environmental attitude (as measured through the New…

  6. Testing for Polytomies in Phylogenetic Species Trees Using Quartet Frequencies.

    Science.gov (United States)

    Sayyari, Erfan; Mirarab, Siavash

    2018-02-28

    Phylogenetic species trees typically represent the speciation history as a bifurcating tree. Speciation events that simultaneously create more than two descendants, thereby creating polytomies in the phylogeny, are possible. Moreover, the inability to resolve relationships is often shown as a (soft) polytomy. Both types of polytomies have been traditionally studied in the context of gene tree reconstruction from sequence data. However, polytomies in the species tree cannot be detected or ruled out without considering gene tree discordance. In this paper, we describe a statistical test based on properties of the multi-species coalescent model to test the null hypothesis that a branch in an estimated species tree should be replaced by a polytomy. On both simulated and biological datasets, we show that the null hypothesis is rejected for all but the shortest branches, and in most cases, it is retained for true polytomies. The test, available as part of the Accurate Species TRee ALgorithm (ASTRAL) package, can help systematists decide whether their datasets are sufficient to resolve specific relationships of interest.

  7. Testing for Polytomies in Phylogenetic Species Trees Using Quartet Frequencies

    Science.gov (United States)

    Sayyari, Erfan

    2018-01-01

    Phylogenetic species trees typically represent the speciation history as a bifurcating tree. Speciation events that simultaneously create more than two descendants, thereby creating polytomies in the phylogeny, are possible. Moreover, the inability to resolve relationships is often shown as a (soft) polytomy. Both types of polytomies have been traditionally studied in the context of gene tree reconstruction from sequence data. However, polytomies in the species tree cannot be detected or ruled out without considering gene tree discordance. In this paper, we describe a statistical test based on properties of the multi-species coalescent model to test the null hypothesis that a branch in an estimated species tree should be replaced by a polytomy. On both simulated and biological datasets, we show that the null hypothesis is rejected for all but the shortest branches, and in most cases, it is retained for true polytomies. The test, available as part of the Accurate Species TRee ALgorithm (ASTRAL) package, can help systematists decide whether their datasets are sufficient to resolve specific relationships of interest. PMID:29495636

  8. Nutritional composition of five food trees species products used in ...

    African Journals Online (AJOL)

    Nutritional composition of five food trees species products used in human diet during food shortage period in Burkina Faso. Thiombiano Daniabla Natacha Edwige, Parkouda Charles, Lamien Nieyidouba, Sere Aminata, Castro-Euler Ana Margarida, Boussim Issaka Joseph ...

  9. Vegetative propagation of twelve fodder tree species indigenous to ...

    African Journals Online (AJOL)

    Vegetative propagation of twelve fodder tree species indigenous to the Sahel, West Africa. Catherine Ky-Dembele, Jules Bayala, Antoine Kalinganire, Fatoumata Tata Traoré, Bréhima Koné, Alain Olivier ...

  10. Quantifying root-reinforcement of river bank soils by four Australian tree species

    Science.gov (United States)

    Docker, B. B.; Hubble, T. C. T.

    2008-08-01

    The increased shear resistance of soil due to root-reinforcement by four common Australian riparian trees, Casuarina glauca, Eucalyptus amplifolia, Eucalyptus elata and Acacia floribunda, was determined in-situ with a field shear-box. Root pull-out strengths and root tensile-strengths were also measured and used to evaluate the utility of the root-reinforcement estimation models that assume simultaneous failure of all roots at the shear plane. Field shear-box results indicate that tree roots fail progressively rather than simultaneously. Shear-strengths calculated for root-reinforced soil assuming simultaneous root failure, yielded values between 50% and 215% higher than directly measured shear-strengths. The magnitude of the overestimate varies among species and probably results from differences in both the geometry of the root-system and tensile strengths of the root material. Soil blocks under A. floribunda which presents many, well-spread, highly-branched fine roots with relatively higher tensile strength, conformed most closely with root model estimates; whereas E. amplifolia, which presents a few, large, unbranched vertical roots, concentrated directly beneath the tree stem and of relatively low tensile strength, deviated furthest from model-estimated shear-strengths. These results suggest that considerable caution be exercised when applying estimates of increased shear-strength due to root-reinforcement in riverbank stability modelling. Nevertheless, increased soil shear strength provided by tree roots can be calculated by knowledge of the Root Area Ratio ( RAR) at the shear plane. At equivalent RAR values, A. floribunda demonstrated the greatest earth reinforcement potential of the four species studied.

  11. Litter Controls Earthworm-Mediated Carbon and Nitrogen Transformations in Soil from Temperate Riparian Buffers

    OpenAIRE

    Maria Kernecker; Joann K. Whalen; Robert L. Bradley

    2014-01-01

    Nutrient cycling in riparian buffers is partly influenced by decomposition of crop, grass, and native tree species litter. Nonnative earthworms in riparian soils in southern Quebec are expected to speed the processes of litter decomposition and nitrogen (N) mineralization, increasing carbon (C) and N losses in gaseous forms or via leachate. A 5-month microcosm experiment evaluated the effect of Aporrectodea turgida on the decomposition of 3 litter types (deciduous leaves, reed canarygrass, an...

  12. Genetic improvement of forest tree species

    Directory of Open Access Journals (Sweden)

    Teotônio Francisco Assis

    2011-01-01

    Full Text Available Brazilian forestry sector is considered one of the most developed in the world, being the base for important industrialsegments which use wood as raw material. Tree breeding has played an important role on improving the competitiveness ofBrazilian forestry-based companies, especially for its positive reflexes on increasing adaptation, forestry productivity and woodquality. In spite of the importance of other forest trees for the economy, such as Schizolobium, Araucaria, Populus and Hevea, themain genera under genetic improvement in the country are Eucalyptus, Pinus, Acacia and Tectona. They are used by industries likepulp and paper, siderurgy, tannin, chips for exportation and lumber, constituting an important source of revenues for the Brazilian’seconomy, besides their positive social and environmental impacts. This paper presents a generic approach to genetic improvementaspects of these four major genera currently undergoing breeding in Brazil.

  13. Riparian Vegetation Mapping Along the Hanford Reach

    International Nuclear Information System (INIS)

    FOGWELL, T.W.

    2003-01-01

    During the biological survey and inventory of the Hanford Site conducted in the mid-1990s (1995 and 1996), preliminary surveys of the riparian vegetation were conducted along the Hanford Reach. These preliminary data were reported to The Nature Conservancy (TNC), but were not included in any TNC reports to DOE or stakeholders. During the latter part of FY2001, PNNL contracted with SEE Botanical, the parties that performed the original surveys in the mid 1990s, to complete the data summaries and mapping associated with the earlier survey data. Those data sets were delivered to PNNL and the riparian mapping by vegetation type for the Hanford Reach is being digitized during the first quarter of FY2002. These mapping efforts provide the information necessary to create subsequent spatial data layers to describe the riparian zone according to plant functional types (trees, shrubs, grasses, sedges, forbs). Quantification of the riparian zone by vegetation types is important to a number of DOE'S priority issues including modeling contaminant transport and uptake in the near-riverine environment and the determination of ecological risk. This work included the identification of vegetative zones along the Reach by changes in dominant plant species covering the shoreline from just to the north of the 300 Area to China Bar near Vernita. Dominant and indicator species included Agropyron dasytachyudA. smithii, Apocynum cannabinum, Aristida longiseta, Artemisia campestris ssp. borealis var scouleriana, Artemisa dracunculus, Artemisia lindleyana, Artemisia tridentata, Bromus tectorum, Chrysothamnus nauseosus, Coreopsis atkinsoniana. Eleocharis palustris, Elymus cinereus, Equisetum hyemale, Eriogonum compositum, Juniperus trichocarpa, Phalaris arundinacea, Poa compressa. Salk exigua, Scirpus acutus, Solidago occidentalis, Sporobolus asper,and Sporobolus cryptandrus. This letter report documents the data received, the processing by PNNL staff, and additional data gathered in FY2002

  14. GROWTH AND NUTRITIONAL ANALYSIS OF TREE SPECIES IN CONTAMINATED SUBSTRATE BY LEACHABLE HERBICIDES

    Directory of Open Access Journals (Sweden)

    Rebecca de Araújo Fiore

    Full Text Available ABSTRACT Ecosystems contamination by residues of pesticides requires special attention to the herbicides subject to leaching. The objective was to select tree species to rhizodegradation contaminated by residues of 2,4-D and atrazine and to recompose riparian areas to agricultural fields, then reducing the risk of contamination of water courses. A total of 36 treatments consisted of the combinations of forest species were evaluated [Inga marginata (Inga, Schizolobium parahyba (guapuruvu, Handroanthus serratifolius (ipê amarelo, Jacaranda puberula (carobinha, Cedrela fissilis (cedro, Calophyllum brasiliensis (landin, Psidium mirsinoides (goiabinha, Tibouchina glandulosa (quaresmeira, Caesalpinia férrea (pau-ferro, Caesalpinia pluviosa (sibipiruna, Terminalia argêntea (capitão and Schinopsis brasiliensis (braúna] and three solutions simulating leachate compound (atrazine, 2,4-D and water - control, with four replicates each. The characteristics measured were plant height, stem diameter, number of leaves, leaf area and dry biomass, and foliar nutrition. Forest species survived the herbicide application, and most showed an increase in macronutrients even under an herbicide application, and the Inga had the highest tolerance regarding growth analysis. It is recommended to use species that are more tolerant to Atrazine and 2,4-D in field experiments to confirm previous results of this simulation.

  15. From leaf to basin: evaluating the impacts of introduced plant species on evapotranspiration fluxes from riparian ecosystems in the southwestern U.S

    Science.gov (United States)

    Hultine, K. R.; Bush, S.; Nagler, P. L.; Morino, K.; Burtch, K.; Dennison, P. E.; Glenn, E. P.; Ehleringer, J.

    2010-12-01

    Global change processes such as climate change and intensive land use pose significant threats to water resources, particularly in arid regions where potential evapotranspiration far exceeds annual rainfall. Potentially compounding these shortages is the progressive expansion of introduced plant species in riparian areas along streams, canals and rivers in geographically arid regions. The question of whether these invasive species have had or will have impacts on water resources is currently under intense debate. We identify a framework for assessing when and where introduced riparian plant species are likely to have the highest potential impact on hydrologic fluxes of arid and semi-arid river systems. We focus on three introduced plant systems that currently dominate southwestern U.S. riparian forests: tamarisk (Tamarix spp.), Russian olive (Eleagnus angustifolia), and Russian knapweed (Acroptilon repens). Our framework focuses on two main criteria: 1) the ecophysiological traits that promote establishment of invasive species across environmental gradients, and 2) an assessment of how hydrologic fluxes are altered by the establishment of introduced species at varying scales. The framework identifies when and where introduced species should have the highest potential impact on the water cycle. This framework will assist land managers and policy makers with restoration and conservation priorities to preserve water resources and valued riparian habitat given limited economic resources.

  16. Seedling Growth Strategies in Bauhinia Species: Comparing Lianas and Trees

    Science.gov (United States)

    Cai, Zhi-Quan; Poorter, Lourens; Cao, Kun-Fang; Bongers, Frans

    2007-01-01

    Background and Aims Lianas are expected to differ from trees in their growth strategies. As a result these two groups of woody species will have different spatial distributions: lianas are more common in high light environments. This study determines the differences in growth patterns, biomass allocation and leaf traits in five closely related liana and tree species of the genus Bauhinia. Methods Seedlings of two light-demanding lianas (Bauhinia tenuiflora and B. claviflora), one shade-tolerant liana (B. aurea), and two light-demanding trees (B. purpurea and B. monandra) were grown in a shadehouse at 25 % of full sunlight. A range of physiological, morphological and biomass parameters at the leaf and whole plant level were compared among these five species. Key Results The two light-demanding liana species had higher relative growth rate (RGR), allocated more biomass to leaf production [higher leaf mass fraction (LMF) and higher leaf area ratio (LAR)] and stem mass fraction (SMF), and less biomass to the roots [root mass fraction (RMF)] than the two tree species. The shade-tolerant liana had the lowest RGR of all five species, and had a higher RMF, lower SMF and similar LMF than the two light-demanding liana species. The two light-demanding lianas had lower photosynthetic rates per unit area (Aarea) and similar photosynthetic rates per unit mass (Amass) than the trees. Across species, RGR was positively related to SLA, but not to LAR and Aarea. Conclusions It is concluded that the faster growth of light-demanding lianas compared with light-demanding trees is based on morphological parameters (SLA, LMF and LAR), and cannot be attributed to higher photosynthetic rates at the leaf level. The shade-tolerant liana exhibited a slow-growth strategy, compared with the light-demanding species. PMID:17720978

  17. The species velocity of trees in Alaska

    Science.gov (United States)

    Morrison, B. D.; Napier, J.; de Lafontaine, G.; Heath, K.; Li, B.; Hu, F.; Greenberg, J. A.

    2017-12-01

    Anthropogenic climate change has motivated interest in the paleo record to enhance our knowledge about past vegetation responses to climate change and help understand potential responses in the future. Additionally, polar regions currently experience the most rapid rates of climate change globally, prompting concern over changes in the ecological composition of high latitude ecosystems. Recent analyses have attempted to construct methods to estimate a species' ability to track climate change by computing climate velocity; a measure of the rate of climate displacement across a landscape which may indicate the speed an organism must migrate to keep pace with climate change. However, a challenge to using climate velocity in understanding range shifts is a lack of species-specificity in the velocity calculations: climate velocity does not actually use any species data in its analysis. To solve the shortcomings of climate velocity in estimating species displacement rates, we computed the "species velocity" of white spruce, green and grey alder populations across the state of Alaska from the Last Glacial Maximum (LGM) to today. Species velocity represents the rate and direction a species is required to migrate to keep pace with a changing climate following the LGM. We used a species distribution model to determine past and present white spruce and alder distributions using statistically downscaled climate data at 60m. Species velocity was then derived from the change in species distribution per year by the change in distribution over Alaska (km/yr). High velocities indicate locations where the species environmental envelope is changing drastically and must disperse rapidly to survive climate change. As a result, high velocity regions are more vulnerable to distribution shifts and higher risk of local extinction. Conversely, low species velocities indicate locations where the local climate envelope is shifting relatively slowly, reducing the stress to disperse quickly

  18. Geographical range and local abundance of tree species in China.

    Directory of Open Access Journals (Sweden)

    Haibao Ren

    Full Text Available Most studies on the geographical distribution of species have utilized a few well-known taxa in Europe and North America, with little research in China and its wide range of climate and forest types. We assembled large datasets to quantify the geographic ranges of tree species in China and to test several biogeographic hypotheses: 1 whether locally abundant species tend to be geographically widespread; 2 whether species are more abundant towards their range-centers; and 3 how abundances are correlated between sites. Local abundances of 651 species were derived from four tree plots of 20-25 ha where all individuals ≥1 cm in stem diameter were mapped and identified taxonomically. Range sizes of these species across China were then estimated from over 460,000 geo-referenced records; a Bayesian approach was used, allowing careful measures of error of each range estimate. The log-transformed range sizes had a bell-shaped distribution with a median of 703,000 km(2, and >90% of 651 species had ranges >10(5 km(2. There was no relationship between local abundance and range size, and no evidence for species being more abundant towards their range-centers. Finally, species' abundances were positively correlated between sites. The widespread nature of most tree species in China suggests few are vulnerable to global extinction, and there is no indication of the double-peril that would result if rare species also had narrow ranges.

  19. Invasive plant species in hardwood tree plantations

    Science.gov (United States)

    Rochelle R. Beasley; Paula M. Pijut

    2010-01-01

    Invasive plants are species that can grow and spread aggressively, mature quickly, and invade an ecosystem causing economic and environmental damage. Invasive plants usually invade disturbed areas, but can also colonize small areas quickly, and may spread and dominate large areas in a few short years. Invasive plant species displace native or desirable forest...

  20. Tree species effect on the redistribution of soil metals

    International Nuclear Information System (INIS)

    Mertens, Jan; Van Nevel, Lotte; De Schrijver, An; Piesschaert, Frederic; Oosterbaan, Anne; Tack, Filip M.G.; Verheyen, Kris

    2007-01-01

    Phytostabilization of metals using trees is often promoted although the influence of different tree species on the mobilization of metals is not yet clear. Soil and biomass were sampled 33 years after planting four tree species (Quercus robur, Fraxinus excelsior, Acer pseudoplatanus, Populus 'Robusta') in a plot experiment on dredged sediment. Poplar took up high amounts of Cd and Zn and this was associated with increased Cd and Zn concentrations in the upper soil layer. The other species contained normal concentrations of Cd, Cu, Cr, Pb and Zn in their tissues. Oak acidified the soil more than the other species and caused a decrease in the concentration of metals in the upper soil layer. The pH under poplar was lower than expected and associated with high carbon concentrations in the top soil. This might be assigned to retardation of the litter decomposition due to elevated Cd and Zn concentrations in the litter. - Trees (33-year-old) growing on polluted dredged sediment have influenced the metal concentration in the upper soil layer and there was a significant tree species effect

  1. Time Series of Images to Improve Tree Species Classification

    Science.gov (United States)

    Miyoshi, G. T.; Imai, N. N.; de Moraes, M. V. A.; Tommaselli, A. M. G.; Näsi, R.

    2017-10-01

    Tree species classification provides valuable information to forest monitoring and management. The high floristic variation of the tree species appears as a challenging issue in the tree species classification because the vegetation characteristics changes according to the season. To help to monitor this complex environment, the imaging spectroscopy has been largely applied since the development of miniaturized sensors attached to Unmanned Aerial Vehicles (UAV). Considering the seasonal changes in forests and the higher spectral and spatial resolution acquired with sensors attached to UAV, we present the use of time series of images to classify four tree species. The study area is an Atlantic Forest area located in the western part of São Paulo State. Images were acquired in August 2015 and August 2016, generating three data sets of images: only with the image spectra of 2015; only with the image spectra of 2016; with the layer stacking of images from 2015 and 2016. Four tree species were classified using Spectral angle mapper (SAM), Spectral information divergence (SID) and Random Forest (RF). The results showed that SAM and SID caused an overfitting of the data whereas RF showed better results and the use of the layer stacking improved the classification achieving a kappa coefficient of 18.26 %.

  2. Germplasm characterization of three jabuticaba tree species

    Directory of Open Access Journals (Sweden)

    Moeses Andrigo Danner

    2011-09-01

    Full Text Available The purpose of this study was to characterize cultivated genotypes of three jabuticaba species (Plinia cauliflora, P. trunciflora, and P. jaboticaba. Phenology and fruit growth, as well as leaf, flower and fruit traits were evaluated. Variability in all traits was observed among genotypes of the three jabuticaba species. The trait peduncle size is indicated for differentiation of the three species under study. The leaf and fruit sizes of the genotypes P. trunciflora 3, P. trunciflora 4, P. trunciflora 5 and P. jaboticaba 1 differ from those described in the literature for these species, indicating the formation of ecotypes. Jabuticaba fruit skin contains high anthocyanin and flavonoid concentrations, with potential use in food and pharmaceutical industries.

  3. Modeling Ecosystem Services for Park Trees: Sensitivity of i-Tree Eco Simulations to Light Exposure and Tree Species Classification

    Directory of Open Access Journals (Sweden)

    Rocco Pace

    2018-02-01

    Full Text Available Ecosystem modeling can help decision making regarding planting of urban trees for climate change mitigation and air pollution reduction. Algorithms and models that link the properties of plant functional types, species groups, or single species to their impact on specific ecosystem services have been developed. However, these models require a considerable effort for initialization that is inherently related to uncertainties originating from the high diversity of plant species in urban areas. We therefore suggest a new automated method to be used with the i-Tree Eco model to derive light competition for individual trees and investigate the importance of this property. Since competition depends also on the species, which is difficult to determine from increasingly used remote sensing methodologies, we also investigate the impact of uncertain tree species classification on the ecosystem services by comparing a species-specific inventory determined by field observation with a genus-specific categorization and a model initialization for the dominant deciduous and evergreen species only. Our results show how the simulation of competition affects the determination of carbon sequestration, leaf area, and related ecosystem services and that the proposed method provides a tool for improving estimations. Misclassifications of tree species can lead to large deviations in estimates of ecosystem impacts, particularly concerning biogenic volatile compound emissions. In our test case, monoterpene emissions almost doubled and isoprene emissions decreased to less than 10% when species were estimated to belong only to either two groups instead of being determined by species or genus. It is discussed that this uncertainty of emission estimates propagates further uncertainty in the estimation of potential ozone formation. Overall, we show the importance of using an individual light competition approach and explicitly parameterizing all ecosystem functions at the

  4. Why abundant tropical tree species are phylogenetically old.

    Science.gov (United States)

    Wang, Shaopeng; Chen, Anping; Fang, Jingyun; Pacala, Stephen W

    2013-10-01

    Neutral models of species diversity predict patterns of abundance for communities in which all individuals are ecologically equivalent. These models were originally developed for Panamanian trees and successfully reproduce observed distributions of abundance. Neutral models also make macroevolutionary predictions that have rarely been evaluated or tested. Here we show that neutral models predict a humped or flat relationship between species age and population size. In contrast, ages and abundances of tree species in the Panamanian Canal watershed are found to be positively correlated, which falsifies the models. Speciation rates vary among phylogenetic lineages and are partially heritable from mother to daughter species. Variable speciation rates in an otherwise neutral model lead to a demographic advantage for species with low speciation rate. This demographic advantage results in a positive correlation between species age and abundance, as found in the Panamanian tropical forest community.

  5. Species trees for the tree swallows (Genus Tachycineta): an alternative phylogenetic hypothesis to the mitochondrial gene tree.

    Science.gov (United States)

    Dor, Roi; Carling, Matthew D; Lovette, Irby J; Sheldon, Frederick H; Winkler, David W

    2012-10-01

    The New World swallow genus Tachycineta comprises nine species that collectively have a wide geographic distribution and remarkable variation both within- and among-species in ecologically important traits. Existing phylogenetic hypotheses for Tachycineta are based on mitochondrial DNA sequences, thus they provide estimates of a single gene tree. In this study we sequenced multiple individuals from each species at 16 nuclear intron loci. We used gene concatenated approaches (Bayesian and maximum likelihood) as well as coalescent-based species tree inference to reconstruct phylogenetic relationships of the genus. We examined the concordance and conflict between the nuclear and mitochondrial trees and between concatenated and coalescent-based inferences. Our results provide an alternative phylogenetic hypothesis to the existing mitochondrial DNA estimate of phylogeny. This new hypothesis provides a more accurate framework in which to explore trait evolution and examine the evolution of the mitochondrial genome in this group. Copyright © 2012 Elsevier Inc. All rights reserved.

  6. Tree production in desert regions using effluent and water harvesting

    Science.gov (United States)

    Martin M. Karpiscak; Gerald J. Gottfried

    2000-01-01

    Treated municipal effluent combined with water harvesting can be used for land restoration and enhancing the growth of important riparian tree species. Paired studies in Arizona are assessing the potential of growing trees using mixtures of effluent and potable water. Trees are grown in the field and in containers. Initial results from the field show high survival for...

  7. Fuelwood quality of promising tree species for alkaline soil sites in relation to tree age

    Energy Technology Data Exchange (ETDEWEB)

    Goel, V.L.; Behl, H.M. [National Botanical Research Inst., Lucknow (India). Biomass Research Center

    1996-06-01

    The fuelwood quality of five tree species suitable for afforestation of alkaline soil sites was investigated in relation to tree age for establishing harvest rotation cycles. Prosopis juliflora and Acacia nilotica were found to be the most suitable species for short rotation fuel wood forestry programmes because of their high wood density, biomass yield, low ash and moisture content, and good heat of combustion at the juvenile stage. The performance of other species like Acacia auriculiformis, Terminalia arjuna and Sesbania formosa is discussed. (author)

  8. Dust retaining properties of leaves of some tree species

    Energy Technology Data Exchange (ETDEWEB)

    Gusev, M I

    1960-05-01

    A study was made in Tashkent, Russia of the dust-retaining power of leaves of several tree species. Investigations were made in a park where these tree species were growing in close proximity, exposed to the effects of dust from the main city street and from the highway passing through the park. Observations on the dust-retaining power of leaves were made mostly during the summer and fall months. The dust-retaining power of leaves of different tree species varied with the dust concentration in the air. In the summer and fall when rains are scarce a steady accumulation of dust was observed on the surface of the leaves. 1 table.

  9. Riparian vegetation interacting with river morphology : modelling long-term ecosystem responses to invasive species, climate change, dams and river restoration

    NARCIS (Netherlands)

    van Oorschot, M.

    2017-01-01

    River systems are amongst the most dynamic and productive ecosystems in the world and provide habitats for numerous fluvial species. River flow and river shape determine the conditions that affect plant growth and survival. In turn, riparian plants can actively influence river flow and sedimentation

  10. Diagnostics of Tree Diseases Caused by Phytophthora austrocedri Species.

    Science.gov (United States)

    Mulholland, Vincent; Elliot, Matthew; Green, Sarah

    2015-01-01

    We present methods for the detection and quantification of four Phytophthora species which are pathogenic on trees; Phytophthora ramorum, Phytophthora kernoviae, Phytophthora lateralis, and Phytophthora austrocedri. Nucleic acid extraction methods are presented for phloem tissue from trees, soil, and pure cultures on agar plates. Real-time PCR methods are presented and include primer and probe sets for each species, general advice on real-time PCR setup and data analysis. A method for sequence-based identification, useful for pure cultures, is also included.

  11. Multilocus inference of species trees and DNA barcoding.

    Science.gov (United States)

    Mallo, Diego; Posada, David

    2016-09-05

    The unprecedented amount of data resulting from next-generation sequencing has opened a new era in phylogenetic estimation. Although large datasets should, in theory, increase phylogenetic resolution, massive, multilocus datasets have uncovered a great deal of phylogenetic incongruence among different genomic regions, due both to stochastic error and to the action of different evolutionary process such as incomplete lineage sorting, gene duplication and loss and horizontal gene transfer. This incongruence violates one of the fundamental assumptions of the DNA barcoding approach, which assumes that gene history and species history are identical. In this review, we explain some of the most important challenges we will have to face to reconstruct the history of species, and the advantages and disadvantages of different strategies for the phylogenetic analysis of multilocus data. In particular, we describe the evolutionary events that can generate species tree-gene tree discordance, compare the most popular methods for species tree reconstruction, highlight the challenges we need to face when using them and discuss their potential utility in barcoding. Current barcoding methods sacrifice a great amount of statistical power by only considering one locus, and a transition to multilocus barcodes would not only improve current barcoding methods, but also facilitate an eventual transition to species-tree-based barcoding strategies, which could better accommodate scenarios where the barcode gap is too small or inexistent.This article is part of the themed issue 'From DNA barcodes to biomes'. © 2016 The Authors.

  12. Water mites (Acari, Hydrachnidia of riparian springs in a small lowland river valley: what are the key factors for species distribution?

    Directory of Open Access Journals (Sweden)

    Andrzej Zawal

    2018-05-01

    Full Text Available This paper examines the impact of disturbance factors—flooding and intermittency—on the distribution of water mites in the riparian springs situated in the valley of a small lowland river, the Krąpiel. The landscape factors and physicochemical parameters of the water were analysed in order to gain an understanding of the pattern of water mite assemblages in the riparian springs. Three limnological types of springs were examined (helocrenes, limnocrenes and rheocrenes along the whole course of the river and a total of 35 water mite species were found. Our study shows that flooding influences spring assemblages, causing a decrease in crenobiontic water mites in flooded springs. The impact of intermittency resulted in a high percentage of species typical of temporary water bodies. Surprisingly, the study revealed the positive impact of the anthropogenic transformation of the river valley: preventing the riparian springs from flooding enhances the diversity of crenobiontic species in non-flooded springs. In the conclusion, our study revealed that further conservation strategies for the protection of the riparian springs along large rivers would take into account ongoing climatic changes and possible the positive impact of the anthropogenic transformation of river valleys.

  13. Coalescent-based species tree inference from gene tree topologies under incomplete lineage sorting by maximum likelihood.

    Science.gov (United States)

    Wu, Yufeng

    2012-03-01

    Incomplete lineage sorting can cause incongruence between the phylogenetic history of genes (the gene tree) and that of the species (the species tree), which can complicate the inference of phylogenies. In this article, I present a new coalescent-based algorithm for species tree inference with maximum likelihood. I first describe an improved method for computing the probability of a gene tree topology given a species tree, which is much faster than an existing algorithm by Degnan and Salter (2005). Based on this method, I develop a practical algorithm that takes a set of gene tree topologies and infers species trees with maximum likelihood. This algorithm searches for the best species tree by starting from initial species trees and performing heuristic search to obtain better trees with higher likelihood. This algorithm, called STELLS (which stands for Species Tree InfErence with Likelihood for Lineage Sorting), has been implemented in a program that is downloadable from the author's web page. The simulation results show that the STELLS algorithm is more accurate than an existing maximum likelihood method for many datasets, especially when there is noise in gene trees. I also show that the STELLS algorithm is efficient and can be applied to real biological datasets. © 2011 The Author. Evolution© 2011 The Society for the Study of Evolution.

  14. Seedling growth strategies in Bauhinia species: comparing lianas and trees

    NARCIS (Netherlands)

    Cai, Z.Q.; Poorter, L.; Cao, K.F.; Bongers, F.J.J.M.

    2007-01-01

    Background and Aims: Lianas are expected to differ from trees in their growth strategies. As a result these two groups of woody species will have different spatial distributions: lianas are more common in high light environments. This study determines the differences in growth patterns, biomass

  15. Regional Assessment of Ozone Sensitive Tree Species Using Bioindicator Plants

    Science.gov (United States)

    John W. Coulston; Gretchen C. Smith; William D. Smith

    2003-01-01

    Tropospheric ozone occurs at phytotoxic levels in the northeastern and mid-Atlantic regions of the United States. Quantifying possible regional-scale impacts of ambient ozone on forest tree species is difficult and is confounded by other factors, such as moisture and light, which influence the uptake of ozone by plants. Biomonitoring provides an approach to document...

  16. Antimicrobial Screening of Some Exotic Tree Species of Rajasthan Desert

    OpenAIRE

    B.B.S. Kapoor* and Shelja Pandita

    2013-01-01

    Antimicrobial screening of ethyl ether and alcoholic extracts of leaves of four selected exotic tree species growing inRajasthan Desert was carried out. Colophospermum mopane, Holoptelea integrifolia, Kigelia pinnata andPutranjiva roxburghii showed positive reactions against bacterial pathogens i.e. Staphylococcus aureus, Escherichiacoli and a fungal pathogen Candida albicans.

  17. Performance of Asian longhorned beetle among tree species

    Science.gov (United States)

    Kelli Hoover; Scott Ludwig; James Sellmer; Deborah McCullough; Laura Lazarus

    2003-01-01

    Two procedures were evaluated for assessing susceptibility of a variety of tree species to Anoplophora glabripennis. In the first procedure, adult beetles were caged with a section of sugar maple, northern red oak, white oak, honeylocust, eastern cottonwood, sycamore or tulip poplar wood and allowed to oviposit.

  18. Evaluation of some tree species for heavy metal biomonitoring and ...

    African Journals Online (AJOL)

    ajl yemi

    It is well established that trees help to reduce air pollution, and there is a growing impetus for green ... with the expansion of cities, increasing demand of energy ... In this study, four plant species were selected in Isfahan city. Leaves samples were collected in July 2009. Leaf samples were dried at 70°C to constant weight.

  19. Tolerance of Four Tropical Tree Species to Heavy Petroleum Contamination

    NARCIS (Netherlands)

    Perez-Hernandez, I.; Ochoa-Gaona, S.; Schroeder, R.H.A.; Rivera-Cruz, M.C.; Geissen, V.

    2013-01-01

    Four species of trees were selected to evaluate the tolerance to heavy crude oil contamination by means of a tolerance index integrating germination, height, biomass and survival as variables. Fresh seeds to Cedrela odorata (tropical cedar), Haematoxylum campechianum (tinto bush), Swietenia

  20. Regional variation in Caribbean dry forest tree species composition

    Science.gov (United States)

    Janet Franklin; Julie Ripplinger; Ethan H. Freid; Humfredo Marcano-Vega; David W. Steadman

    2015-01-01

    How does tree species composition vary in relation to geographical and environmental gradients in a globally rare tropical/subtropical broadleaf dry forest community in the Caribbean? We analyzed data from 153 Forest Inventory and Analysis (FIA) plots from Puerto Rico and the U.S. Virgin Islands (USVI), along with 42 plots that we sampled in the Bahamian Archipelago (...

  1. Biomass models to estimate carbon stocks for hardwood tree species

    Energy Technology Data Exchange (ETDEWEB)

    Ruiz-Peinado, R.; Montero, G.; Rio, M. del

    2012-11-01

    To estimate forest carbon pools from forest inventories it is necessary to have biomass models or biomass expansion factors. In this study, tree biomass models were developed for the main hardwood forest species in Spain: Alnus glutinosa, Castanea sativa, Ceratonia siliqua, Eucalyptus globulus, Fagus sylvatica, Fraxinus angustifolia, Olea europaea var. sylvestris, Populus x euramericana, Quercus canariensis, Quercus faginea, Quercus ilex, Quercus pyrenaica and Quercus suber. Different tree biomass components were considered: stem with bark, branches of different sizes, above and belowground biomass. For each species, a system of equations was fitted using seemingly unrelated regression, fulfilling the additivity property between biomass components. Diameter and total height were explored as independent variables. All models included tree diameter whereas for the majority of species, total height was only considered in the stem biomass models and in some of the branch models. The comparison of the new biomass models with previous models fitted separately for each tree component indicated an improvement in the accuracy of the models. A mean reduction of 20% in the root mean square error and a mean increase in the model efficiency of 7% in comparison with recently published models. So, the fitted models allow estimating more accurately the biomass stock in hardwood species from the Spanish National Forest Inventory data. (Author) 45 refs.

  2. Tree species Diversity in the Department of Forest Resources ...

    African Journals Online (AJOL)

    An inventory of trees (>10cm diameter at breast height (dbh)) growing within the premises (~1.2ha) of the Department of Forest Resources Management (DFRM), University of Ibadan, Nigeria, was conducted as a case study of the species quality (richness and diversity) and quantity (volume) found on the University campus.

  3. Mycorrhizal association of some agroforestry tree species in two ...

    African Journals Online (AJOL)

    Administrator

    2011-05-05

    May 5, 2011 ... Key words: Arbuscular mycorrhizal fungi, agroforestry tree species. INTRODUCTION ... plant growth hormones, protection of host roots from pathogens .... interactions between fungal strains and soil than between the fungus ... phosphorus and drought stress on the growth of Acacic nilotica and. Leucaena ...

  4. Assessing the extent and diversity of riparian ecosystems in Sonora, Mexico

    Science.gov (United States)

    Scott, M.L.; Nagler, P.L.; Glenn, E.P.; Valdes-Casillas, C.; Erker, J.A.; Reynolds, E.W.; Shafroth, P.B.; Gomez-Limon, E.; Jones, C.L.

    2009-01-01

    Conservation of forested riparian ecosystems is of international concern. Relatively little is known of the structure, composition, diversity, and extent of riparian ecosystems in Mexico. We used high- and low-resolution satellite imagery from 2000 to 2006, and ground-based sampling in 2006, to assess the spatial pattern, extent, and woody plant composition of riparian forests across a range of spatial scales for the state of Sonora, Mexico. For all 3rd and higher order streams, river bottomlands with riparian forests occupied a total area of 2,301 km2. Where forested bottomlands remained, on average, 34% of the area had been converted to agriculture while 39% remained forested. We estimated that the total area of riparian forest along the principal streams was 897 km2. Including fencerow trees, the total forested riparian area was 944 km2, or 0.5% of the total land area of Sonora. Ground-based sampling of woody riparian vegetation consisted of 92, 50 m radius circular plots. About 79 woody plant species were noted. The most important tree species, based on cover and frequency, were willow species Salix spp. (primarily S. goodingii and S. bonplandiana), mesquite species Prosopis spp. (primarily P. velutina), and Fremont cottonwood Populus fremontii. Woody riparian taxa at the reach scale showed a trend of increasing diversity from north to south within Sonora. Species richness was greatest in the willow-bald cypress Taxodium distichum var. mexicanum-Mexican cottonwood P. mexicana subsp. dimorphia ecosystem. The non-native tamarisk Tamarix spp. was rare, occurring at just three study reaches. Relatively natural stream flow patterns and fluvial disturbance regimes likely limit its establishment and spread. ?? 2008 Springer Science + Business Media BV.

  5. Tree Species Richness Promotes Invertebrate Herbivory on Congeneric Native and Exotic Tree Saplings in a Young Diversity Experiment.

    Directory of Open Access Journals (Sweden)

    Annika Wein

    Full Text Available Tree diversity in forests is an important driver of ecological processes including herbivory. Empirical evidence suggests both negative and positive effects of tree diversity on herbivory, which can be, respectively, attributed to associational resistance or associational susceptibility. Tree diversity experiments allow testing for associational effects, but evidence regarding which pattern predominates is mixed. Furthermore, it is unknown if herbivory on tree species of native vs. exotic origin is influenced by changing tree diversity in a similar way, or if exotic tree species escape natural enemies, resulting in lower damage that is unrelated to tree diversity. To address these questions, we established a young tree diversity experiment in temperate southwestern Germany that uses high planting density (49 trees per plot; plot size 13 m2. The species pool consists of six congeneric species pairs of European and North American origin (12 species in total planted in monocultures and mixtures (1, 2, 4, 6 species. We assessed leaf damage by leaf-chewing insects on more than 5,000 saplings of six broadleaved tree species. Plot-level tree species richness increased leaf damage, which more than doubled from monocultures to six-species mixtures, strongly supporting associational susceptibility. However, leaf damage among congeneric native and exotic species pairs was similar. There were marked differences in patterns of leaf damage across tree genera, and only the genera likely having a predominately generalist herbivore community showed associational susceptibility, irrespective of the geographical origin of a tree species. In conclusion, an increase in tree species richness in young temperate forests may result in associational susceptibility to feeding by generalist herbivores.

  6. tropiTree: An NGS-Based EST-SSR Resource for 24 Tropical Tree Species

    Science.gov (United States)

    Russell, Joanne R.; Hedley, Peter E.; Cardle, Linda; Dancey, Siobhan; Morris, Jenny; Booth, Allan; Odee, David; Mwaura, Lucy; Omondi, William; Angaine, Peter; Machua, Joseph; Muchugi, Alice; Milne, Iain; Kindt, Roeland; Jamnadass, Ramni; Dawson, Ian K.

    2014-01-01

    The development of genetic tools for non-model organisms has been hampered by cost, but advances in next-generation sequencing (NGS) have created new opportunities. In ecological research, this raises the prospect for developing molecular markers to simultaneously study important genetic processes such as gene flow in multiple non-model plant species within complex natural and anthropogenic landscapes. Here, we report the use of bar-coded multiplexed paired-end Illumina NGS for the de novo development of expressed sequence tag-derived simple sequence repeat (EST-SSR) markers at low cost for a range of 24 tree species. Each chosen tree species is important in complex tropical agroforestry systems where little is currently known about many genetic processes. An average of more than 5,000 EST-SSRs was identified for each of the 24 sequenced species, whereas prior to analysis 20 of the species had fewer than 100 nucleotide sequence citations. To make results available to potential users in a suitable format, we have developed an open-access, interactive online database, tropiTree (http://bioinf.hutton.ac.uk/tropiTree), which has a range of visualisation and search facilities, and which is a model for the efficient presentation and application of NGS data. PMID:25025376

  7. Low host-tree preferences among saproxylic beetles : acomparison of four deciduous species

    OpenAIRE

    Milberg, Per; Bergman, Karl-Olof; Johansson, Helena; Jansson, Nicklas

    2014-01-01

    Many wood-dwelling beetles rely on old hollow trees. In Europe, oaks are known to harbour a species-rich saproxylic beetle fauna, while less is known regarding other broad-leaved tree species. Furthermore, the extent to which saproxylic insect species have specialised on different tree species remains unknown. In this study, we sampled beetles through pitfall traps and window traps in four different tree species in a landscape with many old oaks. We recorded 242 saproxylic beetle species of w...

  8. Capturing characteristics of beryllium-7 in selected tree species

    International Nuclear Information System (INIS)

    Narazaki, Yukinori; Karube, Yoshiharu.

    1997-01-01

    With regard to 7 Be, a natural radioactive nuclide, the botanical capturing characteristics were compared between eight species of those trees which grow in a local district. The mechanism of such botanical capture by their leaves was discussed. The amounts of captured 7 Be were different by tree species. Higher radioactivities were found in the coniferous trees than in the broadleaf trees. The seasonal change of 7 Be radioactivity in leaves was significantly higher in winter and spring and lower in summer. Since airborne or fallout 7 Be particles stay on the upper face of leaves, the deposited amount depended on the surface area per weight of leaves particularly for evergreen trees. Because the 7 Be amount in leaves depended on the fallout capturing ability of leafs superficial skin as well as the cleaning effect of rain and the like, the radioactivity on the surface can change depending on the surface condition of leaves even in the case the levels of 7 Be fallout stayed the same. (author)

  9. Effects of drought on birds and riparian vegetation in the Colorado River Delta, Mexico

    Science.gov (United States)

    Hinojosa-Huerta, Osvel; Nagler, Pamela L.; Carrillo-Guererro, Yamilett K.; Glenn, Edward P.

    2013-01-01

    The riparian corridor in the delta of the Colorado River in Mexico supports internationally important bird habitat. The vegetation is maintained by surface flows from the U.S. and Mexico and by a high, non-saline aquifer into which the dominant phreatophytic shrubs and trees are rooted. We studied the effects of a regional drought on riparian vegetation and avian abundance and diversity from 2002 to 2007, during which time surface flows were markedly reduced compared to the period from 1995 to 2002. Reduced surface flows led to a reduction in native tree cover but an increase in shrub cover, mostly due to an increase in Tamarix spp., an introduced halophytic shrub, and a reduction in Populus fremontii and Salix gooddingii trees. However, overall vegetation cover was unchanged at about 70%. Overall bird density and diversity were also unchanged, but riparian-obligate species tended to decrease in abundance, and generalist species increased. Although reduction in surface flows reduced habitat value and negatively impacted riparian-obligate bird species, portions of the riparian zone exhibited resilience. Surface flows are required to reduce soil salt levels and germinate new cohorts of native trees, but the main source of water supporting this ecosystem is the aquifer, derived from underflows from irrigated fields in the U.S. and Mexico. The long-term prospects for delta riparian habitats are uncertain due to expected reduced flows of river water from climate change, and land use practices that will reduce underflows to the riparian aquifer and increase salinity levels. Active restoration programs would be needed if these habitats are to be preserved for the future.

  10. SPECIES INTERACTIONS BETWEEN ESTUARINE DETRITIVORES: INHIBITION OR FACILITATION?

    Science.gov (United States)

    Native Hawaiian estuarine detritivores; the prawn Macrobrachium grandimanus, and the neritid gastropod Neritina vespertina, were maintained in flow-through microcosms with conditioned leaves from two riparian tree species, Hau (Hibiscus tiliaceus) and guava (Psidium guajava). Th...

  11. EAB induced tree mortality impacts ecosystem respiration and tree water use in an experimental forest

    Science.gov (United States)

    Charles E. Flower; Douglas J. Lynch; Kathleen S. Knight; Miquel A. Gonzales-Meler

    2011-01-01

    The invasive emerald ash borer (Agrilus planipennis Fairmaire, EAB) has been spreading across the forest landscape of the Midwest resulting in the rapid decline of ash trees (Fraxinus spp.). Ash trees represent a dominant riparian species in temperate deciduous forests of the Eastern United States (USDA FIA Database). Prior...

  12. Slope variation and population structure of tree species from different ecological groups in South Brazil

    Directory of Open Access Journals (Sweden)

    Edmilson Bianchini

    2010-09-01

    Full Text Available Size structure and spatial arrangement of 13 abundant tree species were determined in a riparian forest fragment inParaná State, South Brazil (23"16'S and 51"01'W. The studied species were Aspidosperma polyneuron Müll. Arg., Astronium graveolens Jacq. and Gallesia integrifolia (Spreng Harms (emergent species; Alseis floribunda Schott, Ruprechtia laxiflora Meisn. and Bougainvillea spectabilis Willd. (shade-intolerant canopy species; Machaerium paraguariense Hassl, Myroxylum peruiferum L. and Chrysophyllum gonocarpum (Mart. & Eichler ex Miq. Engl. (shade-tolerant canopy species; Sorocea bonplandii (Baill. Bürger, Trichilia casaretti C. Dc, Trichilia catigua A. Juss. and Actinostemon concolor (Spreng. Müll. Arg. (understory small trees species. Height and diameter structures and basal area of species were analyzed. Spatial patterns and slope correlation were analyzed by Moran's / spatial autocorrelation coefficient and partial Mantel test, respectively. The emergent and small understory species showed the highest and the lowest variations in height, diameter and basal area. Size distribution differed among emergent species and also among canopy shade-intolerant species. The spatial pattern ranged among species in all groups, except in understory small tree species. The slope was correlated with spatial pattern for A. polyneuron, A. graveolens, A. floribunda, R. laxiflora, M. peruiferum and T. casaretti. The results indicated that most species occurredin specific places, suggesting that niche differentiation can be an important factor in structuring the tree community.Visando contribuir para o conhecimento das estratégias devida de espécies em fragmentos florestais, foram determinadas as estruturas de tamanho e espacial de 13 espécies arbóreas do remanescente de floresta ciliar no Estado do Paraná, no Sul do Brasil (23"16'S e 51"01'W. Foram analisadas as espécies: Aspidosperma polyneuron Müll. Arg., Astronium graveolens Jacq. e Gallesia

  13. Seasonal variation in radiocesium concentrations in three tree species

    International Nuclear Information System (INIS)

    Garten, C.R. Jr.; Briese, L.A.; Sharitz, R.R.; Gentry, J.B.

    1975-01-01

    Radiocesium concentrations in leaves and stems of black willow (Salix nigra), wax myrtle (Myrica cerifera), and tag alder (Alnus serrulata) trees inhabiting a floodplain contaminated by production-reactor effluents were measured over 1 year. In willow and myrtle trees, leaf radiocesium levels were highest in the spring and declined during the growing season; stem levels remained relatively unchanged or exhibited a slight increase. Seasonal changes in alder tree parts depended on the site examined. The relationship among component parts was essentially consistent across species and collecting sites in the summer. The radiocesium concentrations in order of rank were: roots greater than or equal to leaves greater than stems. Species differences in component-part radiocesium levels were dependent on the part sampled and the collecting site examined. Mean soil to plant-part concentration factors in summer ranged from 0.9 to 7.6, and species means across leaves, stems, and roots averaged 2.1, 3.8, and 6.2 for alder, willow, and myrtle trees, respectively

  14. Use of Hardwood Tree Species by Birds Nesting in Ponderosa Pine Forests

    Science.gov (United States)

    Kathryn L. Purcell; Douglas A. Drynan

    2008-01-01

    We examined the use of hardwood tree species for nesting by bird species breeding in ponderosa pine (Pinus ponderosa) forests in the Sierra National Forest, California. From 1995 through 2002, we located 668 nests of 36 bird species nesting in trees and snags on four 60-ha study sites. Two-thirds of all species nesting in trees or snags used...

  15. Nitrogen fixation in four dryland tree species in central Chile

    International Nuclear Information System (INIS)

    Ovalle, C.; Arredondo, S.; Aronson, J.; Longeri, L.; Avendano, J.

    1998-01-01

    Results are presented from a 5-year experiment using 15 N-enriched fertilizer to determine N 2 fixation in four tree species on degraded soils in a Mediterranean-climate region of central Chile in which there are 5 months of drought. Species tested included three slow-growing but long-lived savannah trees native to southers South America, (acacia caven, Prosopic alba and P. chilensis; Mimosoideae), and Tagasaste (Chamaecytisus proliferus ssp. palmensis; Papilonoideae), a fast-growing but medium-lived tree from the Canary Islands. Tagasaste produced four- to twenty-fold more biomass than the other species, but showed declining N 2 fixation and biomass accumulation during the 5th year, corresponding to the juvenile-to-adult developmental transition. Nitrogen content was significantly higher in Tagasaste and Acacia caven than in the other species. The data revealed inter-specific differences in resource allocation and phenology of N 2 fixation rarely detailed for woody plants in dryland regions. (author)

  16. Diversification rates and species richness across the Tree of Life.

    Science.gov (United States)

    Scholl, Joshua P; Wiens, John J

    2016-09-14

    Species richness varies dramatically among clades across the Tree of Life, by over a million-fold in some cases (e.g. placozoans versus arthropods). Two major explanations for differences in richness among clades are the clade-age hypothesis (i.e. species-rich clades are older) and the diversification-rate hypothesis (i.e. species-rich clades diversify more rapidly, where diversification rate is the net balance of speciation and extinction over time). Here, we examine patterns of variation in diversification rates across the Tree of Life. We address how rates vary across higher taxa, whether rates within higher taxa are related to the subclades within them, and how diversification rates of clades are related to their species richness. We find substantial variation in diversification rates, with rates in plants nearly twice as high as in animals, and rates in some eukaryotes approximately 10-fold faster than prokaryotes. Rates for each kingdom-level clade are then significantly related to the subclades within them. Although caution is needed when interpreting relationships between diversification rates and richness, a positive relationship between the two is not inevitable. We find that variation in diversification rates seems to explain most variation in richness among clades across the Tree of Life, in contrast to the conclusions of previous studies. © 2016 The Author(s).

  17. Widespread Discordance of Gene Trees with Species Tree inDrosophila: Evidence for Incomplete Lineage Sorting

    Energy Technology Data Exchange (ETDEWEB)

    Pollard, Daniel A.; Iyer, Venky N.; Moses, Alan M.; Eisen,Michael B.

    2006-08-28

    The phylogenetic relationship of the now fully sequencedspecies Drosophila erecta and D. yakuba with respect to the D.melanogaster species complex has been a subject of controversy. All threepossible groupings of the species have been reported in the past, thoughrecent multi-gene studies suggest that D. erecta and D. yakuba are sisterspecies. Using the whole genomes of each of these species as well as thefour other fully sequenced species in the subgenus Sophophora, we set outto investigate the placement of D. erecta and D. yakuba in the D.melanogaster species group and to understand the cause of the pastincongruence. Though we find that the phylogeny grouping D. erecta and D.yakuba together is the best supported, we also find widespreadincongruence in nucleotide and amino acid substitutions, insertions anddeletions, and gene trees. The time inferred to span the two keyspeciation events is short enough that under the coalescent model, theincongruence could be the result of incomplete lineage sorting.Consistent with the lineage-sorting hypothesis, substitutions supportingthe same tree were spatially clustered. Support for the different treeswas found to be linked to recombination such that adjacent genes supportthe same tree most often in regions of low recombination andsubstitutions supporting the same tree are most enriched roughly on thesame scale as linkage disequilibrium, also consistent with lineagesorting. The incongruence was found to be statistically significant androbust to model and species choice. No systematic biases were found. Weconclude that phylogenetic incongruence in the D. melanogaster speciescomplex is the result, at least in part, of incomplete lineage sorting.Incomplete lineage sorting will likely cause phylogenetic incongruence inmany comparative genomics datasets. Methods to infer the correct speciestree, the history of every base in the genome, and comparative methodsthat control for and/or utilize this information will be

  18. A MULTIVARIATE APPROACH TO ANALYSE NATIVE FOREST TREE SPECIE SEEDS

    Directory of Open Access Journals (Sweden)

    Alessandro Dal Col Lúcio

    2006-03-01

    Full Text Available This work grouped, by species, the most similar seed tree, using the variables observed in exotic forest species of theBrazilian flora of seeds collected in the Forest Research and Soil Conservation Center of Santa Maria, Rio Grande do Sul, analyzedfrom January, 1997, to march, 2003. For the cluster analysis, all the species that possessed four or more analyses per lot wereanalyzed by the hierarchical Clustering method, of the standardized Euclidian medium distance, being also a principal componentanalysis technique for reducing the number of variables. The species Callistemon speciosus, Cassia fistula, Eucalyptus grandis,Eucalyptus robusta, Eucalyptus saligna, Eucalyptus tereticornis, Delonix regia, Jacaranda mimosaefolia e Pinus elliottii presentedmore than four analyses per lot, in which the third and fourth main components explained 80% of the total variation. The clusteranalysis was efficient in the separation of the groups of all tested species, as well as the method of the main components.

  19. Biogeomorphic feedbacks within riparian corridors: the role of positive interactions between riparian plants

    Science.gov (United States)

    Corenblit, Dov; Steiger, Johannes; Till-Bottraud, Irène

    2017-04-01

    Riparian vegetation affects hydrogeomorphic processes and leads to the construction of wooded fluvial landforms within riparian corridors. Multiple plants form dense multi- and mono-specific stands that enhance plant resistance as grouped plants are less prone to be uprooted than free-standing individuals. Riparian plants which grow in dense stands also enhance their role as ecosystem engineers through the trapping of sediment, organic matter and nutrients. The wooded biogeomorphic landforms which originate from the effect of vegetation on geomorphology lead in return to an improved capacity of the plants to survive, exploit resources, and reach sexual maturity in the intervals between destructive floods. Thus, these vegetated biogeomorphic landforms likely represent a positive niche construction of riparian plants. The nature and intensity of biotic interactions between riparian plants of different species (inter-specific) or the same species (intra-specific) which form dense stands and construct together the niche remain unclear. We strongly suspect that indirect inter-specific positive interactions (facilitation) occur between plants but that more direct intra-specific interactions, such as cooperation and altruism, also operate during the niche construction process. Our aim is to propose an original theoretical framework of inter and intra-specific positive interactions between riparian plants. We suggest that positive interactions between riparian plants are maximized in river reaches with an intermediate level of hydrogeomorphic disturbance. During establishment, plants that grow within dense stands improve their survival and growth because individuals protect each other from shear stress. In addition to the improved capacity to trap mineral and organic matter, individuals which constitute the dense stand can cooperate to mutually support a mycorrhizal fungi network that will connect plants, soil and ground water and influence nutrient transfer, cycling and

  20. Climatic extremes improve predictions of spatial patterns of tree species

    Science.gov (United States)

    Zimmermann, N.E.; Yoccoz, N.G.; Edwards, T.C.; Meier, E.S.; Thuiller, W.; Guisan, Antoine; Schmatz, D.R.; Pearman, P.B.

    2009-01-01

    Understanding niche evolution, dynamics, and the response of species to climate change requires knowledge of the determinants of the environmental niche and species range limits. Mean values of climatic variables are often used in such analyses. In contrast, the increasing frequency of climate extremes suggests the importance of understanding their additional influence on range limits. Here, we assess how measures representing climate extremes (i.e., interannual variability in climate parameters) explain and predict spatial patterns of 11 tree species in Switzerland. We find clear, although comparably small, improvement (+20% in adjusted D2, +8% and +3% in cross-validated True Skill Statistic and area under the receiver operating characteristics curve values) in models that use measures of extremes in addition to means. The primary effect of including information on climate extremes is a correction of local overprediction and underprediction. Our results demonstrate that measures of climate extremes are important for understanding the climatic limits of tree species and assessing species niche characteristics. The inclusion of climate variability likely will improve models of species range limits under future conditions, where changes in mean climate and increased variability are expected.

  1. Characterising the water use and hydraulic properties of riparian tree invasions: A case study of Populus canescens in South Africa

    CSIR Research Space (South Africa)

    Ntshidi, Zanele

    2018-04-01

    Full Text Available catchment of South Africa. Whole tree hydraulic resistance ranged from ~ 1.4 MPa·h·g(sup)-1 for large trees to ~14.3 MPa·h·g(sup)-1 for the small ones. These resistances are higher than those found for poplars in temperate climates, suggesting substantial...

  2. Methodology to evaluate the insecticide potential of forest tree species

    International Nuclear Information System (INIS)

    Morales Soto, Leon; Garcia P, Carlos Mario

    2000-01-01

    The flora diversity of Colombia has an enormous potential in the rational use of its forest resources. Trees with biocidal effects to control pests and diseases need to be investigated. The objective of this research was to develop a methodology with low costs, easy application and quick results. The methodology employed was as follows: selection of tree species based on bibliography, ancestral reports and personal observations. The process was as follows: field collection of plants, preparation of plants extracts and test with Artemia salina Leach to detect biological activity of the extracts using LC50. Bioassays with those extract more promising (LC50 less than 1000 ppm) Determination of active compounds. The methodology was employed with 5 forest tree species: guarea guidonia (L) Sleumer and trichia hirta L. (Meliaceae), Machaerium Moritzianum Benth. (Fabaceae), Swinglea glutinosa Merrill (rutaceae) and Mammea americana L. (Clusiaceae). Using Artemia salina Leach as indicator of biocidal potential, two species were selected as the most promising, those were: Swinglea glutinosa Merril and Machaerium moritzianum Benth. In addition bioassays were made to evaluate fagoinhibition on Atta cephalotes (L.) (Hym: Formicidae) and control of Alconeura. This methodology is recommended for this kind of research

  3. Tree Species with Photosynthetic Stems Have Greater Nighttime Sap Flux

    Directory of Open Access Journals (Sweden)

    Xia Chen

    2018-01-01

    Full Text Available An increasing body of evidence has shown that nighttime sap flux occurs in most plants, but the physiological implications and regulatory mechanism are poorly known. The significance of corticular photosynthesis has received much attention during the last decade, however, the knowledge of the relationship between corticular photosynthesis and nocturnal stem sap flow is limited at present. In this study, we divided seven tree species into two groups according to different photosynthetic capabilities: trees of species with (Castanopsis hystrix, Michelia macclurei, Eucalyptus citriodora, and Eucalyptus grandis × urophylla and without (Castanopsis fissa, Schima superba, and Acacia auriculiformis photosynthetic stems, and the sap flux (Js and chlorophyll fluorescence parameters for these species were measured. One-way ANOVA analysis showed that the Fv/Fm (Maximum photochemical quantum yield of PSII and ΦPSII (effective photochemical quantum yield of PSII values were lower in non-photosynthetic stem species compared to photosynthetic stem species. The linear regression analysis showed that Js,d (daytime sap flux and Js,n (nighttime sap flux of non-photosynthetic stem species was 87.7 and 60.9% of the stem photosynthetic species. Furthermore, for a given daytime transpiration water loss, total nighttime sap flux was higher in species with photosynthetic stems (SlopeSMA = 2.680 than in non-photosynthetic stems species (SlopeSMA = 1.943. These results mean that stem corticular photosynthesis has a possible effect on the nighttime water flow, highlighting the important eco-physiological relationship between nighttime sap flux and corticular photosynthesis.

  4. Tree Species with Photosynthetic Stems Have Greater Nighttime Sap Flux.

    Science.gov (United States)

    Chen, Xia; Gao, Jianguo; Zhao, Ping; McCarthy, Heather R; Zhu, Liwei; Ni, Guangyan; Ouyang, Lei

    2018-01-01

    An increasing body of evidence has shown that nighttime sap flux occurs in most plants, but the physiological implications and regulatory mechanism are poorly known. The significance of corticular photosynthesis has received much attention during the last decade, however, the knowledge of the relationship between corticular photosynthesis and nocturnal stem sap flow is limited at present. In this study, we divided seven tree species into two groups according to different photosynthetic capabilities: trees of species with ( Castanopsis hystrix, Michelia macclurei, Eucalyptus citriodora , and Eucalyptus grandis × urophylla ) and without ( Castanopsis fissa, Schima superba , and Acacia auriculiformis ) photosynthetic stems, and the sap flux ( J s ) and chlorophyll fluorescence parameters for these species were measured. One-way ANOVA analysis showed that the F v / F m (Maximum photochemical quantum yield of PSII) and Φ PSII (effective photochemical quantum yield of PSII) values were lower in non-photosynthetic stem species compared to photosynthetic stem species. The linear regression analysis showed that J s,d (daytime sap flux) and J s,n (nighttime sap flux) of non-photosynthetic stem species was 87.7 and 60.9% of the stem photosynthetic species. Furthermore, for a given daytime transpiration water loss, total nighttime sap flux was higher in species with photosynthetic stems (Slope SMA = 2.680) than in non-photosynthetic stems species (Slope SMA = 1.943). These results mean that stem corticular photosynthesis has a possible effect on the nighttime water flow, highlighting the important eco-physiological relationship between nighttime sap flux and corticular photosynthesis.

  5. Tree Species with Photosynthetic Stems Have Greater Nighttime Sap Flux

    Science.gov (United States)

    Chen, Xia; Gao, Jianguo; Zhao, Ping; McCarthy, Heather R.; Zhu, Liwei; Ni, Guangyan; Ouyang, Lei

    2018-01-01

    An increasing body of evidence has shown that nighttime sap flux occurs in most plants, but the physiological implications and regulatory mechanism are poorly known. The significance of corticular photosynthesis has received much attention during the last decade, however, the knowledge of the relationship between corticular photosynthesis and nocturnal stem sap flow is limited at present. In this study, we divided seven tree species into two groups according to different photosynthetic capabilities: trees of species with (Castanopsis hystrix, Michelia macclurei, Eucalyptus citriodora, and Eucalyptus grandis × urophylla) and without (Castanopsis fissa, Schima superba, and Acacia auriculiformis) photosynthetic stems, and the sap flux (Js) and chlorophyll fluorescence parameters for these species were measured. One-way ANOVA analysis showed that the Fv/Fm (Maximum photochemical quantum yield of PSII) and ΦPSII (effective photochemical quantum yield of PSII) values were lower in non-photosynthetic stem species compared to photosynthetic stem species. The linear regression analysis showed that Js,d (daytime sap flux) and Js,n (nighttime sap flux) of non-photosynthetic stem species was 87.7 and 60.9% of the stem photosynthetic species. Furthermore, for a given daytime transpiration water loss, total nighttime sap flux was higher in species with photosynthetic stems (SlopeSMA = 2.680) than in non-photosynthetic stems species (SlopeSMA = 1.943). These results mean that stem corticular photosynthesis has a possible effect on the nighttime water flow, highlighting the important eco-physiological relationship between nighttime sap flux and corticular photosynthesis. PMID:29416547

  6. Tree species migration studies in the White Mountains of New Hampshire

    Science.gov (United States)

    William B. Leak; Mariko. Yamasaki

    2012-01-01

    The movement of tree species in either latitude or elevation has attracted increased recent attention due to growing national/international concerns over climate change. However, studies on tree species movements began in the early 1970s in the White Mountains of New Hampshire, mostly due to ecological interests in the episodic behavior of upper-elevation tree species...

  7. Management and conservation of tree squirrels: the importance of endemism, species richness, and forest condition

    Science.gov (United States)

    John L. Koprowski

    2005-01-01

    Tree squirrels are excellent indicators of forest health yet the taxon is understudied. Most tree squirrels in the Holarctic Region are imperiled with some level of legal protection. The Madrean Archipelago is the epicenter for tree squirrel diversity in North America with 5 endemic species and 2 introduced species. Most species of the region are poorly studied in...

  8. Predicting abundance of 80 tree species following climate change in the Eastern United States

    Science.gov (United States)

    Louis R. Iverson; Anantha M. Prasad; Anantha M. Prasad

    1998-01-01

    Projected climate warming will potentially have profound effects on the earth?s biota, including a large redistribution of tree species. We developed models to evaluate potential shifts for 80 individual tree species in the eastern United States. First, environmental factors associated with current ranges of tree species were assessed using geographic information...

  9. Riparian Inventory

    Data.gov (United States)

    Kansas Data Access and Support Center — This dataset is a digital representation of the 1:24,000 Land Use Riparian Areas Inventory for the state of Kansas. The dataset includes a 100 foot buffer around all...

  10. Species-specific associations between overstory and understory tree species in a semideciduous tropical forest

    Directory of Open Access Journals (Sweden)

    Flaviana Maluf Souza

    2015-03-01

    Full Text Available We investigated the occurrence of associations between overstory and understory tree species in a semideciduous tropical forest. We identified and measured all trees of nine canopy species with diameter at breast height ≥4.8 cm in a 10.24 ha plot and recorded all individuals beneath their canopies ("understory individuals" within the same diameter class. The total density of understory individuals did not significantly differ under different overstory species. One overstory species (Ceiba speciosa showed higher understory species richness compared with five other species. There was a strong positive association between three overstory species (Esenbeckia leiocarpa, Savia dictyocarpa, and C. speciosa and the density of seven understory species (Balfourodendron riedelianum, Chrysophyllum gonocarpum, E. leiocarpa, Holocalyx balansae, Machaerium stipitatum, Rhaminidium elaeocarpum, and S. dictyocarpa. These results probably reflect the outcome of a complex set of interactions including facilitation and competition, and further studies are necessary to better understand the magnitude and type of the effects of individual overstory species on understory species. The occurrence of species-specific associations shown here reinforces the importance of non-random processes in structuring plant communities and suggest that the influence of overstory species on understory species in high-diversity forests may be more significant than previously thought.

  11. Riparian trees as common denominators across the river flow spectrum: are ecophysiological methods useful tools in environmental flow assessments?

    CSIR Research Space (South Africa)

    Schachtschneider, K

    2014-04-01

    Full Text Available physiological differences for trees occurred along rivers of the drier flow regime spectrum (seasonal and ephemeral). As such, this physiological measurement may be a valuable indicator for water stress, while the other measurements might provide more conclusive...

  12. Nitrous oxide fluxes from forest floor, tree stems and canopies of boreal tree species during spring

    Science.gov (United States)

    Haikarainen, Iikka; Halmeenmäki, Elisa; Machacova, Katerina; Pihlatie, Mari

    2017-04-01

    Boreal forests are considered as small sources of atmospheric nitrous oxide (N2O) due to microbial N2O production in the soils. Recent evidence shows that trees may play an important role in N2O exchange of forest ecosystems by offering pathways for soil produced N2O to the atmosphere. To confirm magnitude, variability and the origin of the tree mediated N2O emissions more research is needed, especially in boreal forests which have been in a minority in such investigation. We measured forest floor, tree stem and shoot N2O exchange of three boreal tree species at the beginning of the growing season (13.4.-13.6.2015) at SMEAR II station in Hyytiälä, located in Southern Finland (61˚ 51´N, 24˚ 17´E, 181 a.s.l.). The fluxes were measured in silver birch (Betula pendula), downy birch (B. pubescens) and Norway spruce (Picea abies) on two sites with differing soil type and characteristics (paludified and mineral soil), vegetation cover and forest structure. The aim was to study the vertical profile of N2O fluxes at stem level and to observe temporal changes in N2O fluxes over the beginning of the growing season. The N2O exchange was determined using the static chamber technique and gas chromatographic analyses. Scaffold towers were used for measurements at multiple stem heights and at the canopy level. Overall, the N2O fluxes from the forest floor and trees at both sites were very small and close to the detection limit. The measured trees mainly emitted N2O from their stems and shoots, while the forest floor acted as a sink of N2O at the paludified site and as a small source of N2O at the mineral soil site. Stem emissions from all the trees at both sites were on average below 0.5 μg N2O m-2 of stem area h-1, and the shoot emissions varied between 0.2 and 0.5 ng N2O m-2 g-1 dry biomass. When the N2O fluxes were scaled up to the whole forest ecosystem, based on the tree biomass and stand density, the N2O emissions from birch and spruce trees at the paludified site

  13. Inferring species trees from gene trees in a radiation of California trapdoor spiders (Araneae, Antrodiaetidae, Aliatypus.

    Directory of Open Access Journals (Sweden)

    Jordan D Satler

    Full Text Available The California Floristic Province is a biodiversity hotspot, reflecting a complex geologic history, strong selective gradients, and a heterogeneous landscape. These factors have led to high endemic diversity across many lifeforms within this region, including the richest diversity of mygalomorph spiders (tarantulas, trapdoor spiders, and kin in North America. The trapdoor spider genus Aliatypus encompasses twelve described species, eleven of which are endemic to California. Several Aliatypus species show disjunct distributional patterns in California (some are found on both sides of the vast Central Valley, and the genus as a whole occupies an impressive variety of habitats.We collected specimens from 89 populations representing all described species. DNA sequence data were collected from seven gene regions, including two newly developed for spider systematics. Bayesian inference (in individual gene tree and species tree approaches recovered a general "3 clade" structure for the genus (A. gulosus, californicus group, erebus group, with three other phylogenetically isolated species differing slightly in position across different phylogenetic analyses. Because of extremely high intraspecific divergences in mitochondrial COI sequences, the relatively slowly evolving 28S rRNA gene was found to be more useful than mitochondrial data for identification of morphologically indistinguishable immatures. For multiple species spanning the Central Valley, explicit hypothesis testing suggests a lack of monophyly for regional populations (e.g., western Coast Range populations. Phylogenetic evidence clearly shows that syntopy is restricted to distant phylogenetic relatives, consistent with ecological niche conservatism.This study provides fundamental insight into a radiation of trapdoor spiders found in the biodiversity hotspot of California. Species relationships are clarified and undescribed lineages are discovered, with more geographic sampling likely to

  14. What is the impact of Impatiens glandulifera on species diversity of invaded riparian vegetation?

    Czech Academy of Sciences Publication Activity Database

    Hejda, Martin; Pyšek, Petr

    2006-01-01

    Roč. 132, - (2006), s. 143-152 ISSN 0006-3207 R&D Projects: GA ČR GA206/05/0323 Institutional research plan: CEZ:AV0Z60050516 Keywords : plant invasions * species diversity * dominance Subject RIV: EF - Botanics Impact factor: 2.854, year: 2006

  15. VEGETATIVE MORPHOLOGY FOR SPECIES IDENTIFICATION OF TROPICAL TREES: FAMILY DISTRIBUTION

    Directory of Open Access Journals (Sweden)

    Peter Hargreaves

    2006-03-01

    Full Text Available Tree specimens from the ESAL herbarium of the Universidade Federal de Lavras, Minas Gerais, Brazil, were describedby vegetative characteristics using CARipé, a Microsoft Access database application specially developed for this study. Only onespecimen per species was usually described. Thus, 2 observers described 567 herbarium species as a base to test methods ofidentification as part of a larger study. The present work formed part of that study and provides information on the distribution of22 vegetative characters among 16 families having 10 or more species described. The characters are discussed. The study foundmarked differences, even discontinuities, of distributions of characters between those families. Therefore it should be possible toincorporate phylogenetic relationships into the identification process.

  16. Relating tree growth to rainfall in Bolivian rain forests: a test for six species using tree ring analysis.

    Science.gov (United States)

    Brienen, Roel J W; Zuidema, Pieter A

    2005-11-01

    Many tropical regions show one distinct dry season. Often, this seasonality induces cambial dormancy of trees, particularly if these belong to deciduous species. This will often lead to the formation of annual rings. The aim of this study was to determine whether tree species in the Bolivian Amazon region form annual rings and to study the influence of the total amount and seasonal distribution of rainfall on diameter growth. Ring widths were measured on stem discs of a total of 154 trees belonging to six rain forest species. By correlating ring width and monthly rainfall data we proved the annual character of the tree rings for four of our study species. For two other species the annual character was proved by counting rings on trees of known age and by radiocarbon dating. The results of the climate-growth analysis show a positive relationship between tree growth and rainfall in certain periods of the year, indicating that rainfall plays a major role in tree growth. Three species showed a strong relationship with rainfall at the beginning of the rainy season, while one species is most sensitive to the rainfall at the end of the previous growing season. These results clearly demonstrate that tree ring analysis can be successfully applied in the tropics and that it is a promising method for various research disciplines.

  17. The evaluation of the establishment and growth of indigenous trees to restore deforested riparian areas in the Mapungubwe National Park, South Africa / Theo Scholtz

    OpenAIRE

    Scholtz, Theo

    2007-01-01

    The deforestation of riparian areas is a major concern in southern Africa. These areas are characterized as fragile ecosystems which contribute largely to the regional and global biodiversity of the world. It is therefore important to restore these degraded areas along the natural rivers of South Africa to ensure the sustainability and biodiversity of riparian corridors. Riparian areas inside the National Parks of South Africa, and especially in Mapungubwe National Park, have a high esthetica...

  18. Urban tree species show the same hydraulic response to vapor pressure deficit across varying tree size and environmental conditions.

    Directory of Open Access Journals (Sweden)

    Lixin Chen

    Full Text Available The functional convergence of tree transpiration has rarely been tested for tree species growing under urban conditions even though it is of significance to elucidate the relationship between functional convergence and species differences of urban trees for establishing sustainable urban forests in the context of forest water relations.We measured sap flux of four urban tree species including Cedrus deodara, Zelkova schneideriana, Euonymus bungeanus and Metasequoia glyptostroboides in an urban park by using thermal dissipation probes (TDP. The concurrent microclimate conditions and soil moisture content were also measured. Our objectives were to examine 1 the influence of tree species and size on transpiration, and 2 the hydraulic control of urban trees under different environmental conditions over the transpiration in response to VPD as represented by canopy conductance. The results showed that the functional convergence between tree diameter at breast height (DBH and tree canopy transpiration amount (E(c was not reliable to predict stand transpiration and there were species differences within same DBH class. Species differed in transpiration patterns to seasonal weather progression and soil water stress as a result of varied sensitivity to water availability. Species differences were also found in their potential maximum transpiration rate and reaction to light. However, a same theoretical hydraulic relationship between G(c at VPD = 1 kPa (G(cref and the G(c sensitivity to VPD (-dG(c/dlnVPD across studied species as well as under contrasting soil water and R(s conditions in the urban area.We concluded that urban trees show the same hydraulic regulation over response to VPD across varying tree size and environmental conditions and thus tree transpiration could be predicted with appropriate assessment of G(cref.

  19. Urban tree species show the same hydraulic response to vapor pressure deficit across varying tree size and environmental conditions.

    Science.gov (United States)

    Chen, Lixin; Zhang, Zhiqiang; Ewers, Brent E

    2012-01-01

    The functional convergence of tree transpiration has rarely been tested for tree species growing under urban conditions even though it is of significance to elucidate the relationship between functional convergence and species differences of urban trees for establishing sustainable urban forests in the context of forest water relations. We measured sap flux of four urban tree species including Cedrus deodara, Zelkova schneideriana, Euonymus bungeanus and Metasequoia glyptostroboides in an urban park by using thermal dissipation probes (TDP). The concurrent microclimate conditions and soil moisture content were also measured. Our objectives were to examine 1) the influence of tree species and size on transpiration, and 2) the hydraulic control of urban trees under different environmental conditions over the transpiration in response to VPD as represented by canopy conductance. The results showed that the functional convergence between tree diameter at breast height (DBH) and tree canopy transpiration amount (E(c)) was not reliable to predict stand transpiration and there were species differences within same DBH class. Species differed in transpiration patterns to seasonal weather progression and soil water stress as a result of varied sensitivity to water availability. Species differences were also found in their potential maximum transpiration rate and reaction to light. However, a same theoretical hydraulic relationship between G(c) at VPD = 1 kPa (G(cref)) and the G(c) sensitivity to VPD (-dG(c)/dlnVPD) across studied species as well as under contrasting soil water and R(s) conditions in the urban area. We concluded that urban trees show the same hydraulic regulation over response to VPD across varying tree size and environmental conditions and thus tree transpiration could be predicted with appropriate assessment of G(cref).

  20. Riparian Vegetation Mapping Along the Hanford Reach

    Energy Technology Data Exchange (ETDEWEB)

    FOGWELL, T.W.

    2003-07-11

    During the biological survey and inventory of the Hanford Site conducted in the mid-1990s (1995 and 1996), preliminary surveys of the riparian vegetation were conducted along the Hanford Reach. These preliminary data were reported to The Nature Conservancy (TNC), but were not included in any TNC reports to DOE or stakeholders. During the latter part of FY2001, PNNL contracted with SEE Botanical, the parties that performed the original surveys in the mid 1990s, to complete the data summaries and mapping associated with the earlier survey data. Those data sets were delivered to PNNL and the riparian mapping by vegetation type for the Hanford Reach is being digitized during the first quarter of FY2002. These mapping efforts provide the information necessary to create subsequent spatial data layers to describe the riparian zone according to plant functional types (trees, shrubs, grasses, sedges, forbs). Quantification of the riparian zone by vegetation types is important to a number of DOE'S priority issues including modeling contaminant transport and uptake in the near-riverine environment and the determination of ecological risk. This work included the identification of vegetative zones along the Reach by changes in dominant plant species covering the shoreline from just to the north of the 300 Area to China Bar near Vernita. Dominant and indicator species included Agropyron dasytachyudA. smithii, Apocynum cannabinum, Aristida longiseta, Artemisia campestris ssp. borealis var scouleriana, Artemisa dracunculus, Artemisia lindleyana, Artemisia tridentata, Bromus tectorum, Chrysothamnus nauseosus, Coreopsis atkinsoniana. Eleocharis palustris, Elymus cinereus, Equisetum hyemale, Eriogonum compositum, Juniperus trichocarpa, Phalaris arundinacea, Poa compressa. Salk exigua, Scirpus acutus, Solidago occidentalis, Sporobolus asper,and Sporobolus cryptandrus. This letter report documents the data received, the processing by PNNL staff, and additional data gathered in FY

  1. Estimating phylogenetic relationships despite discordant gene trees across loci: the species tree of a diverse species group of feather mites (Acari: Proctophyllodidae).

    Science.gov (United States)

    Knowles, Lacey L; Klimov, Pavel B

    2011-11-01

    With the increased availability of multilocus sequence data, the lack of concordance of gene trees estimated for independent loci has focused attention on both the biological processes producing the discord and the methodologies used to estimate phylogenetic relationships. What has emerged is a suite of new analytical tools for phylogenetic inference--species tree approaches. In contrast to traditional phylogenetic methods that are stymied by the idiosyncrasies of gene trees, approaches for estimating species trees explicitly take into account the cause of discord among loci and, in the process, provides a direct estimate of phylogenetic history (i.e. the history of species divergence, not divergence of specific loci). We illustrate the utility of species tree estimates with an analysis of a diverse group of feather mites, the pinnatus species group (genus Proctophyllodes). Discord among four sequenced nuclear loci is consistent with theoretical expectations, given the short time separating speciation events (as evident by short internodes relative to terminal branch lengths in the trees). Nevertheless, many of the relationships are well resolved in a Bayesian estimate of the species tree; the analysis also highlights ambiguous aspects of the phylogeny that require additional loci. The broad utility of species tree approaches is discussed, and specifically, their application to groups with high speciation rates--a history of diversification with particular prevalence in host/parasite systems where species interactions can drive rapid diversification.

  2. Host heterogeneity influences the impact of a non-native disease invasion on populations of a foundation tree species

    Science.gov (United States)

    Jules, Erik S.; Carroll, Allyson L.; Garcia, Andrea M.; Steenbock, Christopher M.; Kauffman, Matthew J.

    2014-01-01

    Invasive pathogens are becoming increasingly important in forested ecosystems, yet they are often difficult to study because of their rapid transmission. The rate and extent of pathogen spread are thought to be partially controlled by variation in host characteristics, such as when host size and location influence susceptibility. Few host-pathogen systems, however, have been used to test this prediction. We used Port Orford cedar (Chamaecyparis lawsoniana), a foundation tree species in riparian areas of California and Oregon (USA), and the invasive oomycete Phytophthora lateralis to assess pathogen impacts and the role of host characteristics on invasion. Across three streams that had been infected for 13–18 years by P. lateralis, we mapped 2241 trees and determined whether they had been infected using dendrochronology. The infection probability of trees was governed by host size (diameter at breast height [DBH]) and geomorphic position (e.g., active channel, stream bank, floodplain, etc.) similarly across streams. For instance, only 23% of trees <20 cm DBH were infected, while 69% of trees ≥20 cm DBH were infected. Presumably, because spores of P. lateralis are transported downstream in water, they are more likely to encounter well-developed root systems of larger trees. Also because of this water-transport of spores, differences in infection probability were found across the geomorphic positions: 59% of cedar in the active channel and the stream bank (combined) were infected, while 23% of trees found on higher geomorphic types were infected. Overall, 32% of cedar had been infected across the three streams. However, 63% of the total cedar basal area had been killed, because the greatest number of trees, and the largest trees, were found in the most susceptible positions. In the active channel and stream bank, 91% of the basal area was infected, while 46% was infected across higher geomorphic positions. The invasion of Port Orford cedar populations by

  3. Architecture of 53 rain forest tree species differing in adult stature and shade tolerance

    NARCIS (Netherlands)

    Poorter, L.; Bongers, F.J.J.M.; Sterck, F.J.; Wöll, H.

    2003-01-01

    Tree architecture determines a tree's light capture, stability, and efficiency of crown growth. The hypothesis that light demand and adult stature of tree species within a community, independently of each other, determine species' architectural traits was tested by comparing 53 Liberian rain forest

  4. Systematic adaptive cluster sampling for the assessment of rare tree species in Nepal

    NARCIS (Netherlands)

    Acharya, B.; Bhattarai, G.; Gier, de A.; Stein, A.

    2000-01-01

    Sampling to assess rare tree species poses methodic problems, because they may cluster and many plots with no such trees are to be expected. We used systematic adaptive cluster sampling (SACS) to sample three rare tree species in a forest area of about 40 ha in Nepal. We checked its applicability

  5. A maximum pseudo-likelihood approach for estimating species trees under the coalescent model

    Directory of Open Access Journals (Sweden)

    Edwards Scott V

    2010-10-01

    Full Text Available Abstract Background Several phylogenetic approaches have been developed to estimate species trees from collections of gene trees. However, maximum likelihood approaches for estimating species trees under the coalescent model are limited. Although the likelihood of a species tree under the multispecies coalescent model has already been derived by Rannala and Yang, it can be shown that the maximum likelihood estimate (MLE of the species tree (topology, branch lengths, and population sizes from gene trees under this formula does not exist. In this paper, we develop a pseudo-likelihood function of the species tree to obtain maximum pseudo-likelihood estimates (MPE of species trees, with branch lengths of the species tree in coalescent units. Results We show that the MPE of the species tree is statistically consistent as the number M of genes goes to infinity. In addition, the probability that the MPE of the species tree matches the true species tree converges to 1 at rate O(M -1. The simulation results confirm that the maximum pseudo-likelihood approach is statistically consistent even when the species tree is in the anomaly zone. We applied our method, Maximum Pseudo-likelihood for Estimating Species Trees (MP-EST to a mammal dataset. The four major clades found in the MP-EST tree are consistent with those in the Bayesian concatenation tree. The bootstrap supports for the species tree estimated by the MP-EST method are more reasonable than the posterior probability supports given by the Bayesian concatenation method in reflecting the level of uncertainty in gene trees and controversies over the relationship of four major groups of placental mammals. Conclusions MP-EST can consistently estimate the topology and branch lengths (in coalescent units of the species tree. Although the pseudo-likelihood is derived from coalescent theory, and assumes no gene flow or horizontal gene transfer (HGT, the MP-EST method is robust to a small amount of HGT in the

  6. LEAF RESIDUE DECOMPOSITION OF SELECTED ATLANTIC FOREST TREE SPECIES

    Directory of Open Access Journals (Sweden)

    Helga Dias Arato

    2018-02-01

    Full Text Available ABSTRACT Biogeochemical cycling is essential to establish and maintain plant and animal communities. Litter is one of main compartments of this cycle, and the kinetics of leaf decomposition in forest litter depend on the chemical composition and environmental conditions. This study evaluated the effect of leaf composition and environmental conditions on leaf decomposition of native Atlantic Forest trees. The following species were analyzed: Mabea fistulifera Mart., Bauhinia forficata Link., Aegiphila sellowiana Cham., Zeyheria tuberculosa (Vell, Luehea grandiflora Mart. et. Zucc., Croton floribundus Spreng., Trema micrantha (L Blume, Cassia ferruginea (Schrad Schrad ex DC, Senna macranthera (DC ex Collad. H. S. Irwin and Barney and Schinus terebinthifolius Raddi (Anacardiaceae. For each species, litter bags were distributed on and fixed to the soil surface of soil-filled pots (in a greenhouse, or directly to the surface of the same soil type in a natural forest (field. Every 30 days, the dry weight and soil basal respiration in both environments were determined. The cumulative decomposition of leaves varied according to the species, leaf nutrient content and environment. In general, the decomposition rate was lowest for Aegiphila sellowiana and fastest for Bauhinia forficate and Schinus terebinthifolius. This trend was similar under the controlled conditions of a greenhouse and in the field. The selection of species with a differentiated decomposition pattern, suited for different stages of the recovery process, can help improve soil restoration.

  7. Rapid and accurate species tree estimation for phylogeographic investigations using replicated subsampling.

    Science.gov (United States)

    Hird, Sarah; Kubatko, Laura; Carstens, Bryan

    2010-11-01

    We describe a method for estimating species trees that relies on replicated subsampling of large data matrices. One application of this method is phylogeographic research, which has long depended on large datasets that sample intensively from the geographic range of the focal species; these datasets allow systematicists to identify cryptic diversity and understand how contemporary and historical landscape forces influence genetic diversity. However, analyzing any large dataset can be computationally difficult, particularly when newly developed methods for species tree estimation are used. Here we explore the use of replicated subsampling, a potential solution to the problem posed by large datasets, with both a simulation study and an empirical analysis. In the simulations, we sample different numbers of alleles and loci, estimate species trees using STEM, and compare the estimated to the actual species tree. Our results indicate that subsampling three alleles per species for eight loci nearly always results in an accurate species tree topology, even in cases where the species tree was characterized by extremely rapid divergence. Even more modest subsampling effort, for example one allele per species and two loci, was more likely than not (>50%) to identify the correct species tree topology, indicating that in nearly all cases, computing the majority-rule consensus tree from replicated subsampling provides a good estimate of topology. These results were supported by estimating the correct species tree topology and reasonable branch lengths for an empirical 10-locus great ape dataset. Copyright © 2010 Elsevier Inc. All rights reserved.

  8. Impacts of hydroelectric dams on alluvial riparian plant communities in Eastern Brazilian Amazonian.

    Science.gov (United States)

    Ferreira, Leandro Valle; Cunha, Denise A; Chaves, Priscilla P; Matos, Darley C L; Parolin, Pia

    2013-09-01

    The major rivers of the Amazon River basin and their biota are threatened by the planned construction of large hydroelectric dams that are expected to have strong impacts on floodplain plant communities. The present study presents forest inventories from three floodplain sites colonized by alluvial riparian vegetation in the Tapajós, Xingu and Tocantins River basins in eastern Amazonian. Results indicate that tree species of the highly specialized alluvial riparian vegetation are clearly distinct among the three river basins, although they are not very distinct from each other and environmental constraints are very similar. With only 6 of 74 species occurring in all three inventories, most tree and shrub species are restricted to only one of the rivers, indicating a high degree of local distribution. Different species occupy similar environmental niches, making these fragile riparian formations highly valuable. Conservation plans must consider species complementarily when decisions are made on where to place floodplain forest conservation units to avoid the irreversible loss of unique alluvial riparian vegetation biodiversity.

  9. Impacts of hydroelectric dams on alluvial riparian plant communities in eastern Brazilian Amazonian

    Directory of Open Access Journals (Sweden)

    LEANDRO VALLE FERREIRA

    2013-09-01

    Full Text Available The major rivers of the Amazon River basin and their biota are threatened by the planned construction of large hydroelectric dams that are expected to have strong impacts on floodplain plant communities. The present study presents forest inventories from three floodplain sites colonized by alluvial riparian vegetation in the Tapajós, Xingu and Tocantins River basins in eastern Amazonian. Results indicate that tree species of the highly specialized alluvial riparian vegetation are clearly distinct among the three river basins, although they are not very distinct from each other and environmental constraints are very similar. With only 6 of 74 species occurring in all three inventories, most tree and shrub species are restricted to only one of the rivers, indicating a high degree of local distribution. Different species occupy similar environmental niches, making these fragile riparian formations highly valuable. Conservation plans must consider species complementarily when decisions are made on where to place floodplain forest conservation units to avoid the irreversible loss of unique alluvial riparian vegetation biodiversity.

  10. Linking stream flow and groundwater to avian habitat in a desert riparian system.

    Science.gov (United States)

    Merritt, David M; Bateman, Heather L

    2012-10-01

    shrublands. Variability in the BHI was best explained by the cover of deciduous riparian tree species, primarily Populus fremontii, Platanus wrightii, and Salix gooddingii. The distributions of these plant species were well explained by the depth to groundwater and magnitude of fluvial disturbance along the stream. Bird species diversity and richness were significantly higher in sites with higher habitat indices. This quantitative linkage between surface and groundwater, plant species composition, habitat complexity, and bird communities has implications for water management and in determining environmental flows.

  11. Functional species traits of carabid beetles living in two riparian alder forests of the Sila plateau subject to different disturbance factors (Coleoptera: Carabidae

    Directory of Open Access Journals (Sweden)

    Antonio Mazzei

    2015-06-01

    Full Text Available We studied carabid beetle assemblages found in riparian black alder forests in the Sila plateau (Southern Apennines. These carabid assemblages are characterized by a high incidence of endemic small-sized, low dispersal, highly stenotopic (hygrophilic, and trophycally specialized species. To evaluate the influence of anthropogenic disturbance on these insects, we compared carabid assemblage of an old undisturbed forest (65-170y, wilderness landscape with that of a younger, partly grazed stand (40-60y, cropland landscape. The carabid assemblage of the disturbed stand was characterized by a higher number of species, but showed a lower incidence of zoophagous specialists and brachypterous beetles, with many species probably coming from an adjacent cropland. However, the disturbed stand maintains almost 80% of the core species found in the older forest, which suggests that these insects are not particularly sensitive to disturbance factors represented by periodic wood harvesting and extensive cattle grazing.

  12. In vitro propagation of tropical hardwood tree species — A review (2001-2011)

    Science.gov (United States)

    Paula M. Pijut; Rochelle R. Beasley; Shaneka S. Lawson; Kaitlin J. Palla; Micah E. Stevens; Ying. Wang

    2012-01-01

    Tropical hardwood tree species are important economically and ecologically, and play a significant role in the biodiversity of plant and animal species within an ecosystem. There are over 600 species of tropical timbers in the world, many of which are commercially valuable in the international trade of plywood, roundwood, sawnwood, and veneer. Many of these tree...

  13. Effects of tree species on soil properties in a forest of the Northeastern United States

    NARCIS (Netherlands)

    Dijkstra, F.A.

    2001-01-01

    Large differences in soil pH and available Ca in the surface soil exist among tree species growing in a mixed hardwood forest in northwestern Connecticut. The observed association between tree species and specific soil chemical properties within mixed-species stands implies that changes in

  14. Effect of liquid nitrogen storage on seed germination of 51 tree species

    Science.gov (United States)

    Jill R. Barbour; Bernard R. Parresol

    2003-01-01

    Two liquid nitrogen storage experiments were performed on 51 tree species. In experiment 1, seeds of 9western tree species were placed in a liquid nitrogen tank for 3 time periods: 24 hours, 4 weeks, and 222 days. A corresponding control sample accompanied each treatment. For three species,Calocedrus decurrens, Pinus jefferyi, and ...

  15. The hydrological vulnerability of western North American boreal tree species based on ground-based observations of tree mortality

    Science.gov (United States)

    Hember, R. A.; Kurz, W. A.; Coops, N. C.

    2017-12-01

    Several studies indicate that climate change has increased rates of tree mortality, adversely affecting timber supply and carbon storage in western North American boreal forests. Statistical models of tree mortality can play a complimentary role in detecting and diagnosing forest change. Yet, such models struggle to address real-world complexity, including expectations that hydrological vulnerability arises from both drought stress and excess-water stress, and that these effects vary by species, tree size, and competitive status. Here, we describe models that predict annual probability of tree mortality (Pm) of common boreal tree species based on tree height (H), biomass of larger trees (BLT), soil water content (W), reference evapotranspiration (E), and two-way interactions. We show that interactions among H and hydrological variables are consistently significant. Vulnerability to extreme droughts consistently increases as H approaches maximum observed values of each species, while some species additionally show increasing vulnerability at low H. Some species additionally show increasing vulnerability to low W under high BLT, or increasing drought vulnerability under low BLT. These results suggest that vulnerability of trees to increasingly severe droughts depends on the hydraulic efficiency, competitive status, and microclimate of individual trees. Static simulations of Pm across a 1-km grid (i.e., with time-independent inputs of H, BLT, and species composition) indicate complex spatial patterns in the time trends during 1965-2014 and a mean change in Pm of 42 %. Lastly, we discuss how the size-dependence of hydrological vulnerability, in concert with increasingly severe drought events, may shape future responses of stand-level biomass production to continued warming and increasing carbon dioxide concentration in the region.

  16. Section-Based Tree Species Identification Using Airborne LIDAR Point Cloud

    Science.gov (United States)

    Yao, C.; Zhang, X.; Liu, H.

    2017-09-01

    The application of LiDAR data in forestry initially focused on mapping forest community, particularly and primarily intended for largescale forest management and planning. Then with the smaller footprint and higher sampling density LiDAR data available, detecting individual tree overstory, estimating crowns parameters and identifying tree species are demonstrated practicable. This paper proposes a section-based protocol of tree species identification taking palm tree as an example. Section-based method is to detect objects through certain profile among different direction, basically along X-axis or Y-axis. And this method improve the utilization of spatial information to generate accurate results. Firstly, separate the tree points from manmade-object points by decision-tree-based rules, and create Crown Height Mode (CHM) by subtracting the Digital Terrain Model (DTM) from the digital surface model (DSM). Then calculate and extract key points to locate individual trees, thus estimate specific tree parameters related to species information, such as crown height, crown radius, and cross point etc. Finally, with parameters we are able to identify certain tree species. Comparing to species information measured on ground, the portion correctly identified trees on all plots could reach up to 90.65 %. The identification result in this research demonstrate the ability to distinguish palm tree using LiDAR point cloud. Furthermore, with more prior knowledge, section-based method enable the process to classify trees into different classes.

  17. Iodine uptake and distribution in horticultural and fruit tree species

    Directory of Open Access Journals (Sweden)

    Alessandra Caffagni

    2012-07-01

    Full Text Available Iodine is an essential microelement for humans and iodine deficiency disorder (IDD is one of the most widespread nutrient-deficiency diseases in the world. Iodine biofortification of plants provides an attractive opportunity to increase iodine intake in humans and to prevent and control IDD. This study was conducted to investigate the iodine uptake and accumulation in edible portion of two fruit trees: plum and nectarine, and two horticultural crops: tomato and potato. Two type of iodine treatments (soil and foliar spray application, and, for fresh market tomato, two production systems (open field and greenhouse hydroponic culture were tested. The distribution of iodine in potato stem and leaves, and in plum tree fruits, leaves, and branches was investigated. Iodine content of potato tubers after postharvest storage and processing (cooking, and iodine content of nectarine fruits after postharvest storage and processing (peeling were also determined. Differences in iodine accumulation were observed among the four crops, between applications, and between production systems. In open field, the maximum iodine content ranged from 9.5 and 14.3 μg 100 g−1 for plum and nectarine fruit, to 89.4 and 144.0 μg 100 g−1 for potato tuber and tomato fruit, respectively. These results showed that nectarine and plum tree accumulated significantly lower amounts of iodine in their edible tissues, in comparison with potato and tomato. The experiments also indicated hydroponic culture as the most efficient system for iodine uptake in tomato, since its fresh fruits accumulated up to 2423 μg 100 g−1 of iodine. Iodine was stored mainly in the leaves, in all species investigated. Only a small portion of iodine was moved to plum tree branches and fruits, and to potato stems and tubers. No differences in iodine content after fruit peeling was observed. A significant increase in iodine content of potato was observed after baking, whereas a significant decrease was

  18. Landscape variation in tree species richness in northern Iran forests.

    Science.gov (United States)

    Bourque, Charles P-A; Bayat, Mahmoud

    2015-01-01

    Mapping landscape variation in tree species richness (SR) is essential to the long term management and conservation of forest ecosystems. The current study examines the prospect of mapping field assessments of SR in a high-elevation, deciduous forest in northern Iran as a function of 16 biophysical variables representative of the area's unique physiography, including topography and coastal placement, biophysical environment, and forests. Basic to this study is the development of moderate-resolution biophysical surfaces and associated plot-estimates for 202 permanent sampling plots. The biophysical variables include: (i) three topographic variables generated directly from the area's digital terrain model; (ii) four ecophysiologically-relevant variables derived from process models or from first principles; and (iii) seven variables of Landsat-8-acquired surface reflectance and two, of surface radiance. With symbolic regression, it was shown that only four of the 16 variables were needed to explain 85% of observed plot-level variation in SR (i.e., wind velocity, surface reflectance of blue light, and topographic wetness indices representative of soil water content), yielding mean-absolute and root-mean-squared error of 0.50 and 0.78, respectively. Overall, localised calculations of wind velocity and surface reflectance of blue light explained about 63% of observed variation in SR, with wind velocity accounting for 51% of that variation. The remaining 22% was explained by linear combinations of soil-water-related topographic indices and associated thresholds. In general, SR and diversity tended to be greatest for plots dominated by Carpinus betulus (involving ≥ 33% of all trees in a plot), than by Fagus orientalis (median difference of one species). This study provides a significant step towards describing landscape variation in SR as a function of modelled and satellite-based information and symbolic regression. Methods in this study are sufficiently general to be

  19. Effects of tree species, water and nitrogen on mycorrhizal C flux

    Science.gov (United States)

    Menyailo, O.; Matvienko, A.

    2012-12-01

    Mycorrhiza plays an important role in global carbon cycle, especially, in forest soils, yet the effect of tree species on the amount and timing of C transfer through roots to myccorhiza is largely unknown. We studied the C transport to mycorrhiza under 6 most commonly dominant in boreal forests tree species using the mesh collars installed at the Siberian afforestation experiment. The CO2 flux from mycorrhizal and non-mycorrhizal mesh collars indicated the mycorrhizal C flux. Tree species strongly differed in C flux to mycorrhiza: more C was transferred by deciduous species than by conifers. The mycorrhizal CO2 flux was not linked to soil temperature but rather to trees phenology and to photosynthetic activity. All tree species transfered more carbon to mycorrhiza during the second half of summer and in September, this is because all the carbon photosynthesized earlier is used for building the tree biomass. Seasonal variation in C transfer to mycorrhiza was much larger than hourly variation (within a day). Nitrogen application (50 kg/ha) increased mycorrhizal C flux only under Scots pine, but not under larch, thus the effect of N application is tree species dependent. We found under most tree species that more C was transferred by trees to mycorrhiza in root-free collars, where the soil moisture was higher than in collars with roots. This suggests that trees preferentially support those parts of mycorrhiza, which can gain extra-resources.

  20. Prospect of Milicia excelsa (Welw. C. Berg for Multi-Tree Species Agroforestry

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    Alfred Ossai Onefeli

    2015-11-01

    Full Text Available Background and Purpose: The population of most of our economically indigenous tree species in Nigeria is declining. Human activities and agricultural practices have been the ultimate contributors to this decrease. In order to ameliorate the conflict between agriculture and forestry, agroforestry was introduced. However, most of the practiced agroforestry is based on single tree species. Agroforestry practiced using single tree species have been reported to be ecologically staggered and therefore it is pertinent that phytosociology of trees with agroforestry potential is studied in order to improve the sustainability of human livelihood. Materials and Methods: This study was carried out in the University of Ibadan’s campus forest. The data were collected on Milicia excelsa (Welw. C. Berg by enumerating the tree species and also by identifying and enumerating the tree species associated with the subject tree (Milicia excelsa. Statistical analysis was done using percentages, Chi-square and charts. Results: A total of 49 individual Milicia excelsa were encountered in the study area. The results show 31 woody tree species associated with Milicia excelsa. Of all the associates Azadirachta indica A.Juss. happened to be the best one, having an average distance of 5.4 m to the subject tree. The sex ratio of Milicia excelsa was discovered to be approximately 1:1. Conclusions: Based on the obtained results of this research it may be concluded that Milicia excelsa has the prospect of being used in agroforestry in multi-tree species systems.

  1. Soil phosphorus heterogeneity promotes tree species diversity and phylogenetic clustering in a tropical seasonal rainforest.

    Science.gov (United States)

    Xu, Wumei; Ci, Xiuqin; Song, Caiyun; He, Tianhua; Zhang, Wenfu; Li, Qiaoming; Li, Jie

    2016-12-01

    The niche theory predicts that environmental heterogeneity and species diversity are positively correlated in tropical forests, whereas the neutral theory suggests that stochastic processes are more important in determining species diversity. This study sought to investigate the effects of soil nutrient (nitrogen and phosphorus) heterogeneity on tree species diversity in the Xishuangbanna tropical seasonal rainforest in southwestern China. Thirty-nine plots of 400 m 2 (20 × 20 m) were randomly located in the Xishuangbanna tropical seasonal rainforest. Within each plot, soil nutrient (nitrogen and phosphorus) availability and heterogeneity, tree species diversity, and community phylogenetic structure were measured. Soil phosphorus heterogeneity and tree species diversity in each plot were positively correlated, while phosphorus availability and tree species diversity were not. The trees in plots with low soil phosphorus heterogeneity were phylogenetically overdispersed, while the phylogenetic structure of trees within the plots became clustered as heterogeneity increased. Neither nitrogen availability nor its heterogeneity was correlated to tree species diversity or the phylogenetic structure of trees within the plots. The interspecific competition in the forest plots with low soil phosphorus heterogeneity could lead to an overdispersed community. However, as heterogeneity increase, more closely related species may be able to coexist together and lead to a clustered community. Our results indicate that soil phosphorus heterogeneity significantly affects tree diversity in the Xishuangbanna tropical seasonal rainforest, suggesting that deterministic processes are dominant in this tropical forest assembly.

  2. Tree species composition affects the abundance of rowan (Sorbus aucuparia L.) in urban forests in Finland.

    Science.gov (United States)

    Hamberg, Leena; Lehvävirta, Susanna; Kotze, D Johan; Heikkinen, Juha

    2015-03-15

    Recent studies have shown a considerable increase in the abundance of rowan (Sorbus aucuparia) saplings in urban forests in Finland, yet the reasons for this increase are not well understood. Here we investigated whether canopy cover or tree species composition, i.e., the basal areas of different tree species in Norway spruce dominated urban forests, affects the abundances of rowan seedlings, saplings and trees. Altogether 24 urban forest patches were investigated. We sampled the number of rowan and other saplings, and calculated the basal areas of trees. We showed that rowan abundance was affected by tree species composition. The basal area of rowan trees (≥ 5 cm in diameter at breast height, dbh) decreased with increasing basal area of Norway spruce, while the cover of rowan seedlings increased with an increase in Norway spruce basal area. However, a decrease in the abundance of birch (Betula pendula) and an increase in the broad-leaved tree group (Acer platanoides, Alnus glutinosa, Alnus incana, Amelanchier spicata, Prunus padus, Quercus robur, Rhamnus frangula and Salix caprea) coincided with a decreasing number of rowans. Furthermore, rowan saplings were scarce in the vicinity of mature rowan trees. Although it seems that tree species composition has an effect on rowan, the relationship between rowan saplings and mature trees is complex, and therefore we conclude that regulating tree species composition is not an easy way to keep rowan thickets under control in urban forests in Finland. Copyright © 2015 Elsevier Ltd. All rights reserved.

  3. Species tree estimation for the late blight pathogen, Phytophthora infestans, and close relatives.

    Directory of Open Access Journals (Sweden)

    Jaime E Blair

    Full Text Available To better understand the evolutionary history of a group of organisms, an accurate estimate of the species phylogeny must be known. Traditionally, gene trees have served as a proxy for the species tree, although it was acknowledged early on that these trees represented different evolutionary processes. Discordances among gene trees and between the gene trees and the species tree are also expected in closely related species that have rapidly diverged, due to processes such as the incomplete sorting of ancestral polymorphisms. Recently, methods have been developed for the explicit estimation of species trees, using information from multilocus gene trees while accommodating heterogeneity among them. Here we have used three distinct approaches to estimate the species tree for five Phytophthora pathogens, including P. infestans, the causal agent of late blight disease in potato and tomato. Our concatenation-based "supergene" approach was unable to resolve relationships even with data from both the nuclear and mitochondrial genomes, and from multiple isolates per species. Our multispecies coalescent approach using both Bayesian and maximum likelihood methods was able to estimate a moderately supported species tree showing a close relationship among P. infestans, P. andina, and P. ipomoeae. The topology of the species tree was also identical to the dominant phylogenetic history estimated in our third approach, Bayesian concordance analysis. Our results support previous suggestions that P. andina is a hybrid species, with P. infestans representing one parental lineage. The other parental lineage is not known, but represents an independent evolutionary lineage more closely related to P. ipomoeae. While all five species likely originated in the New World, further study is needed to determine when and under what conditions this hybridization event may have occurred.

  4. Species tree estimation for the late blight pathogen, Phytophthora infestans, and close relatives.

    Science.gov (United States)

    Blair, Jaime E; Coffey, Michael D; Martin, Frank N

    2012-01-01

    To better understand the evolutionary history of a group of organisms, an accurate estimate of the species phylogeny must be known. Traditionally, gene trees have served as a proxy for the species tree, although it was acknowledged early on that these trees represented different evolutionary processes. Discordances among gene trees and between the gene trees and the species tree are also expected in closely related species that have rapidly diverged, due to processes such as the incomplete sorting of ancestral polymorphisms. Recently, methods have been developed for the explicit estimation of species trees, using information from multilocus gene trees while accommodating heterogeneity among them. Here we have used three distinct approaches to estimate the species tree for five Phytophthora pathogens, including P. infestans, the causal agent of late blight disease in potato and tomato. Our concatenation-based "supergene" approach was unable to resolve relationships even with data from both the nuclear and mitochondrial genomes, and from multiple isolates per species. Our multispecies coalescent approach using both Bayesian and maximum likelihood methods was able to estimate a moderately supported species tree showing a close relationship among P. infestans, P. andina, and P. ipomoeae. The topology of the species tree was also identical to the dominant phylogenetic history estimated in our third approach, Bayesian concordance analysis. Our results support previous suggestions that P. andina is a hybrid species, with P. infestans representing one parental lineage. The other parental lineage is not known, but represents an independent evolutionary lineage more closely related to P. ipomoeae. While all five species likely originated in the New World, further study is needed to determine when and under what conditions this hybridization event may have occurred.

  5. Indicator species of essential forest tree species in the Burdur district.

    Science.gov (United States)

    Negiz, Mehmet Güvenç; Eser, Yunus; Kuzugüdenll, Emre; Izkan, Kürşad

    2015-01-01

    The forests of Burdur district for long have been subjected to over grazing and individual selection. As a result of this, majority of the forest areas in the district were degraded. In the district, afforestation efforts included majority of forestry implementations. It is well known that selecting suitable species plays an important role for achieving afforestation efforts. In this context, knowing the indicator species among the target species would be used in afforestation efforts, studies on the interrelationships between environmental factors and target species distribution is vital for selecting suitable species for a given area. In this study, Anatolian Black pine (Pinus nigra), Red pine (Pinus brutia), Crimean juniper (Juniperus excelsa) and Taurus cedar (Cedrus libani), essential tree species, were considered as target species. The data taken from 100 sample plots in Burdur district was used. Interspecific correlation analysis was performed to determine the positive and negative indicator species among each of the target species. As a result of ICA, 2 positive (Berberis crataegina, Juniperus oxycedrus), 2 negative (Phillyrea latifolia, Quercus coccifera) for Crimean Juniper, I positive (Juniperus oxycedrus), 3 negative (Onopordium acanthium, Fraxinus ornus, Phillyrea latifolia) for Anatolian black pine, 3 positive (Paliurus spina-christi, Quercus coccifer, Crataegus orientalis), 2 negative (Berberis crataegina, Astragalus nanus) for Red pine and 3 positive (Berberis crataegina, Rhamnus oleoides, Astragalus prusianus) 2 negative (Paliurus spina-christi, Quercus cerris) for Taurus cedarwere defined as indicator plant species. In this way, practical information was obtained for selecting the most suitable species, among the target species, for afforestation efforts in Burdur district.

  6. A Bayesian Supertree Model for Genome-Wide Species Tree Reconstruction

    Science.gov (United States)

    De Oliveira Martins, Leonardo; Mallo, Diego; Posada, David

    2016-01-01

    Current phylogenomic data sets highlight the need for species tree methods able to deal with several sources of gene tree/species tree incongruence. At the same time, we need to make most use of all available data. Most species tree methods deal with single processes of phylogenetic discordance, namely, gene duplication and loss, incomplete lineage sorting (ILS) or horizontal gene transfer. In this manuscript, we address the problem of species tree inference from multilocus, genome-wide data sets regardless of the presence of gene duplication and loss and ILS therefore without the need to identify orthologs or to use a single individual per species. We do this by extending the idea of Maximum Likelihood (ML) supertrees to a hierarchical Bayesian model where several sources of gene tree/species tree disagreement can be accounted for in a modular manner. We implemented this model in a computer program called guenomu whose inputs are posterior distributions of unrooted gene tree topologies for multiple gene families, and whose output is the posterior distribution of rooted species tree topologies. We conducted extensive simulations to evaluate the performance of our approach in comparison with other species tree approaches able to deal with more than one leaf from the same species. Our method ranked best under simulated data sets, in spite of ignoring branch lengths, and performed well on empirical data, as well as being fast enough to analyze relatively large data sets. Our Bayesian supertree method was also very successful in obtaining better estimates of gene trees, by reducing the uncertainty in their distributions. In addition, our results show that under complex simulation scenarios, gene tree parsimony is also a competitive approach once we consider its speed, in contrast to more sophisticated models. PMID:25281847

  7. Remnant trees affect species composition but not structure of tropical second-growth forest.

    Science.gov (United States)

    Sandor, Manette E; Chazdon, Robin L

    2014-01-01

    Remnant trees, spared from cutting when tropical forests are cleared for agriculture or grazing, act as nuclei of forest regeneration following field abandonment. Previous studies on remnant trees were primarily conducted in active pasture or old fields abandoned in the previous 2-3 years, and focused on structure and species richness of regenerating forest, but not species composition. Our study is among the first to investigate the effects of remnant trees on neighborhood forest structure, biodiversity, and species composition 20 years post-abandonment. We compared the woody vegetation around individual remnant trees to nearby plots without remnant trees in the same second-growth forests ("control plots"). Forest structure beneath remnant trees did not differ significantly from control plots. Species richness and species diversity were significantly higher around remnant trees. The species composition around remnant trees differed significantly from control plots and more closely resembled the species composition of nearby old-growth forest. The proportion of old-growth specialists and generalists around remnant trees was significantly greater than in control plots. Although previous studies show that remnant trees may initially accelerate secondary forest growth, we found no evidence that they locally affect stem density, basal area, and seedling density at later stages of regrowth. Remnant trees do, however, have a clear effect on the species diversity, composition, and ecological groups of the surrounding woody vegetation, even after 20 years of forest regeneration. To accelerate the return of diversity and old-growth forest species into regrowing forest on abandoned land, landowners should be encouraged to retain remnant trees in agricultural or pastoral fields.

  8. A Bayesian Supertree Model for Genome-Wide Species Tree Reconstruction.

    Science.gov (United States)

    De Oliveira Martins, Leonardo; Mallo, Diego; Posada, David

    2016-05-01

    Current phylogenomic data sets highlight the need for species tree methods able to deal with several sources of gene tree/species tree incongruence. At the same time, we need to make most use of all available data. Most species tree methods deal with single processes of phylogenetic discordance, namely, gene duplication and loss, incomplete lineage sorting (ILS) or horizontal gene transfer. In this manuscript, we address the problem of species tree inference from multilocus, genome-wide data sets regardless of the presence of gene duplication and loss and ILS therefore without the need to identify orthologs or to use a single individual per species. We do this by extending the idea of Maximum Likelihood (ML) supertrees to a hierarchical Bayesian model where several sources of gene tree/species tree disagreement can be accounted for in a modular manner. We implemented this model in a computer program called guenomu whose inputs are posterior distributions of unrooted gene tree topologies for multiple gene families, and whose output is the posterior distribution of rooted species tree topologies. We conducted extensive simulations to evaluate the performance of our approach in comparison with other species tree approaches able to deal with more than one leaf from the same species. Our method ranked best under simulated data sets, in spite of ignoring branch lengths, and performed well on empirical data, as well as being fast enough to analyze relatively large data sets. Our Bayesian supertree method was also very successful in obtaining better estimates of gene trees, by reducing the uncertainty in their distributions. In addition, our results show that under complex simulation scenarios, gene tree parsimony is also a competitive approach once we consider its speed, in contrast to more sophisticated models. © The Author(s) 2014. Published by Oxford University Press on behalf of the Society of Systematic Biologists.

  9. Favorable fragmentation: river reservoirs can impede downstream expansion of riparian weeds.

    Science.gov (United States)

    Rood, Stewart B; Braatne, Jeffrey H; Goater, Lori A

    2010-09-01

    River valleys represent biologically rich corridors characterized by natural disturbances that create moist and barren sites suitable for colonization by native riparian plants, and also by weeds. Dams and reservoirs interrupt the longitudinal corridors and we hypothesized that this could restrict downstream weed expansion. To consider this "reservoir impediment" hypothesis we assessed the occurrences and abundances of weeds along a 315-km river valley corridor that commenced with an unimpounded reach of the Snake River and extended through Brownlee, Oxbow, and Hells Canyon reservoirs and dams, and downstream along the Snake River. Sampling along 206 belt transects with 3610 quadrats revealed 16 noxious and four invasive weed species. Ten weeds were upland plants, with Canada thistle (Cirsium arvense) restricted to the upstream reaches, where field morning glory (Convolvulus arvensis) was also more common. In contrast, St. John's wort (Hypericum perforatum) was more abundant below the dams, and medusahead wildrye (Taeniatherum caput-medusae) occurred primarily along the reservoirs. All seven riparian species were abundant in the upstream zones but sparse or absent below the dams. This pattern was observed for the facultative riparian species, poison hemlock (Conium maculatum) and perennial pepperweed (Lepidium latifolium), the obligate riparian, yellow nut sedge (Cyperus esculentus), the invasive perennial, reed canary grass (Phalaris arundinacea), and three invasive riparian trees, Russian olive (Elaeagnus angustifolia), false indigo (Amorpha fruticosa), and tamarisk (Tamarix spp.). The hydrophyte purple loosestrife (Lythrum salicaria) was also restricted to the upstream zone. These longitudinal patterns indicate that the reservoirs have impeded the downstream expansion of riparian weeds, and this may especially result from the repetitive draw-down and refilling of Brownlee Reservoir that imposes a lethal combination of drought and flood stress. The dams and

  10. Landscape variation in tree species richness in northern Iran forests.

    Directory of Open Access Journals (Sweden)

    Charles P-A Bourque

    Full Text Available Mapping landscape variation in tree species richness (SR is essential to the long term management and conservation of forest ecosystems. The current study examines the prospect of mapping field assessments of SR in a high-elevation, deciduous forest in northern Iran as a function of 16 biophysical variables representative of the area's unique physiography, including topography and coastal placement, biophysical environment, and forests. Basic to this study is the development of moderate-resolution biophysical surfaces and associated plot-estimates for 202 permanent sampling plots. The biophysical variables include: (i three topographic variables generated directly from the area's digital terrain model; (ii four ecophysiologically-relevant variables derived from process models or from first principles; and (iii seven variables of Landsat-8-acquired surface reflectance and two, of surface radiance. With symbolic regression, it was shown that only four of the 16 variables were needed to explain 85% of observed plot-level variation in SR (i.e., wind velocity, surface reflectance of blue light, and topographic wetness indices representative of soil water content, yielding mean-absolute and root-mean-squared error of 0.50 and 0.78, respectively. Overall, localised calculations of wind velocity and surface reflectance of blue light explained about 63% of observed variation in SR, with wind velocity accounting for 51% of that variation. The remaining 22% was explained by linear combinations of soil-water-related topographic indices and associated thresholds. In general, SR and diversity tended to be greatest for plots dominated by Carpinus betulus (involving ≥ 33% of all trees in a plot, than by Fagus orientalis (median difference of one species. This study provides a significant step towards describing landscape variation in SR as a function of modelled and satellite-based information and symbolic regression. Methods in this study are sufficiently

  11. The relationship between species diversity and genetic structure in the rare Picea chihuahuana tree species community, Mexico.

    Science.gov (United States)

    Simental-Rodríguez, Sergio Leonel; Quiñones-Pérez, Carmen Zulema; Moya, Daniel; Hernández-Tecles, Enrique; López-Sánchez, Carlos Antonio; Wehenkel, Christian

    2014-01-01

    Species diversity and genetic diversity, the most basic elements of biodiversity, have long been treated as separate topics, although populations evolve within a community context. Recent studies on community genetics and ecology have suggested that genetic diversity is not completely independent of species diversity. The Mexican Picea chihuahuana Martínez is an endemic species listed as "Endangered" on the Red List. Forty populations of Chihuahua spruce have been identified. This species is often associated with tree species of eight genera in gallery forests. This rare Picea chihuahuana tree community covers an area no more than 300 ha and has been subject of several studies involving different topics such as ecology, genetic structure and climate change. The overall aim of these studies was to obtain a dataset for developing management tools to help decision makers implement preservation and conservation strategies. However, this unique forest tree community may also represent an excellent subject for helping us to understand the interplay between ecological and evolutionary processes in determining community structure and dynamics. The AFLP technique and species composition data were used together to test the hypothesis that species diversity is related to the adaptive genetic structure of some dominant tree species (Picea chihuahuana, Pinus strobiformis, Pseudotsuga menziesii and Populus tremuloides) of the Picea chihuahuana tree community at fourteen locations. The Hill numbers were used as a diversity measure. The results revealed a significant correlation between tree species diversity and genetic structure in Populus tremuloides. Because the relationship between the two levels of diversity was found to be positive for the putative adaptive AFLP detected, genetic and species structures of the tree community were possibly simultaneously adapted to a combination of ecological or environmental factors. The present findings indicate that interactions between

  12. Light-dependent leaf trait variation in 43 tropical dry forest tree species

    NARCIS (Netherlands)

    Markesteijn, L.; Poorter, L.; Bongers, F.J.J.M.

    2007-01-01

    Our understanding of leaf acclimation in relation to irradiance of fully grown or juvenile trees is mainly based on research involving tropical wet forest species. We studied sun¿shade plasticity of 24 leaf traits of 43 tree species in a Bolivian dry deciduous forest. Sampling was confined to small

  13. Silviculture and the assessment of climate change genetic risk for southern Appalachian forest tree species

    Science.gov (United States)

    Kevin M. Potter; Barbara S. Crane

    2012-01-01

    Changing climate conditions and increasing insect and pathogen infestations will increase the likelihood that forest trees could experience population-level extirpation or species-level extinction during the next century. Gene conservation and silvicultural efforts to preserve forest tree genetic diversity present a particular challenge in species-rich regions such as...

  14. Calcium weathering in forested soils and the effedt of different tree species

    NARCIS (Netherlands)

    Dijkstra, F.A.; Breemen, van N.; Jongmans, A.G.; Davies, G.R.; Likens, G.E.

    2003-01-01

    Soil weathering can be an important mechanism to neutralize acidity in forest soils. Tree species may differ in their effect on or response to soil weathering. We used soil mineral data and the natural strontium isotope ratio Sr-87/Sr-86 as a tracer to identify the effect of tree species on the Ca

  15. Water and nitrogen dynamics in rotational woodlots of five tree species in western Tanzania

    NARCIS (Netherlands)

    Nyadzi, G.I.; Janssen, B.H.; Otsyina, R.M.; Booltink, H.W.G.; Ong, C.K.; Oenema, O.

    2003-01-01

    The objective of this study was to compare the effects of woodlots of five tree species, continuous maize (Zea mays L.) and natural fallow on soil water and nitrogen dynamics in western Tanzania. The tree species evaluated were Acacia crassicarpa (A. Cunn. ex Benth.), Acacia julifera ( Berth.),

  16. Tree species diversity and distribution patterns in tropical forests of Garo Hills.

    Science.gov (United States)

    A. Kumar; B.G. Marcot; A. Saxena

    2006-01-01

    We analyzed phytosociological characteristics and diversity patterns of tree species of tropical forests of Garo Hills, western Meghalaya, northeast India. The main vegetation of the region included primary forests, secondary forests, and sal (Shorea robusta) plantations, with 162, 132, and 87 tree species, respectively. The Shannon-Wiener...

  17. Ecological and economic determinants of invasive tree species on Alabama forestland

    Science.gov (United States)

    Anwar Hussain; Changyou Sun; Xiaoping Zhou; Ian A. Munn

    2008-01-01

    The spread of invasive tree species has caused increasing harm to the environment. This study was motivated by the considerations that earlier studies generally ignored the role of economic factors related to the occurrence and abundance of invasive species, and empirical analyses of invasive trees on forestland have been inadequate. We assessed the impact of...

  18. Arbuscular mycorrhizal fungal diversity and natural enemies promote coexistence of tropical tree species

    Science.gov (United States)

    Benedicte Bachelot; María Uriarte; Krista L. McGuire; Jill Thompson; Jess Zimmerman

    2017-01-01

    Negative population feedbacks mediated by natural enemies can promote species coexistence at the community scale through disproportionate mortality of numerically dominant (common) tree species. Simultaneously, associations with arbuscular mycorrhizal fungi (AMF) can result in positive effects on tree populations. Coupling data on seedling foliar damage from herbivores...

  19. Fire frequency and tree canopy structure influence plant species diversity in a forest-grassland ecotone

    Science.gov (United States)

    David W. Peterson; Peter B. Reich

    2008-01-01

    Disturbances and environmental heterogeneity are two factors thought to influence plant species diversity, but their effects are still poorly understood in many ecosystems. We surveyed understory vegetation and measured tree canopy cover on permanent plots spanning an experimental fire frequency gradient to test fire frequency and tree canopy effects on plant species...

  20. Estimating tree species diversity in the savannah using NDVI and woody canopy cover

    Science.gov (United States)

    Madonsela, Sabelo; Cho, Moses Azong; Ramoelo, Abel; Mutanga, Onisimo; Naidoo, Laven

    2018-04-01

    Remote sensing applications in biodiversity research often rely on the establishment of relationships between spectral information from the image and tree species diversity measured in the field. Most studies have used normalized difference vegetation index (NDVI) to estimate tree species diversity on the basis that it is sensitive to primary productivity which defines spatial variation in plant diversity. The NDVI signal is influenced by photosynthetically active vegetation which, in the savannah, includes woody canopy foliage and grasses. The question is whether the relationship between NDVI and tree species diversity in the savanna depends on the woody cover percentage. This study explored the relationship between woody canopy cover (WCC) and tree species diversity in the savannah woodland of southern Africa and also investigated whether there is a significant interaction between seasonal NDVI and WCC in the factorial model when estimating tree species diversity. To fulfil our aim, we followed stratified random sampling approach and surveyed tree species in 68 plots of 90 m × 90 m across the study area. Within each plot, all trees with diameter at breast height of >10 cm were sampled and Shannon index - a common measure of species diversity which considers both species richness and abundance - was used to quantify tree species diversity. We then extracted WCC in each plot from existing fractional woody cover product produced from Synthetic Aperture Radar (SAR) data. Factorial regression model was used to determine the interaction effect between NDVI and WCC when estimating tree species diversity. Results from regression analysis showed that (i) WCC has a highly significant relationship with tree species diversity (r2 = 0.21; p NDVI and WCC is not significant, however, the factorial model significantly reduced the error of prediction (RMSE = 0.47, p NDVI (RMSE = 0.49) or WCC (RMSE = 0.49) model during the senescence period. The result justifies our assertion

  1. Tamarisk coalition - native riparian plant materials program

    Science.gov (United States)

    Stacy Kolegas

    2012-01-01

    The Tamarisk Coalition (TC), a nonprofit organization dedicated to riparian restoration in the western United States, has created a Native Plant Materials Program to address the identified need for native riparian plant species for use in revegetation efforts on the Colorado Plateau. The specific components of the Native Plant Materials Program include: 1) provide seed...

  2. The Riparianness of a Desert Herpetofauna

    Science.gov (United States)

    Charles H. Lowe

    1989-01-01

    Within the Mojave, Sonoran, and Chihuahuan Desert subdivisions of the North American Desert in the U.S., more than half of 143 total amphibian and reptilian species perform as riparian and/or wetland taxa. For the reptiles, but not the amphibians, there is a significant inverse relationship between riparianness (obligate through preferential and facultative to...

  3. Effects of species biological traits and environmental heterogeneity on simulated tree species distribution shifts under climate change.

    Science.gov (United States)

    Wang, Wen J; He, Hong S; Thompson, Frank R; Spetich, Martin A; Fraser, Jacob S

    2018-09-01

    Demographic processes (fecundity, dispersal, colonization, growth, and mortality) and their interactions with environmental changes are not well represented in current climate-distribution models (e.g., niche and biophysical process models) and constitute a large uncertainty in projections of future tree species distribution shifts. We investigate how species biological traits and environmental heterogeneity affect species distribution shifts. We used a species-specific, spatially explicit forest dynamic model LANDIS PRO, which incorporates site-scale tree species demography and competition, landscape-scale dispersal and disturbances, and regional-scale abiotic controls, to simulate the distribution shifts of four representative tree species with distinct biological traits in the central hardwood forest region of United States. Our results suggested that biological traits (e.g., dispersal capacity, maturation age) were important for determining tree species distribution shifts. Environmental heterogeneity, on average, reduced shift rates by 8% compared to perfect environmental conditions. The average distribution shift rates ranged from 24 to 200myear -1 under climate change scenarios, implying that many tree species may not able to keep up with climate change because of limited dispersal capacity, long generation time, and environmental heterogeneity. We suggest that climate-distribution models should include species demographic processes (e.g., fecundity, dispersal, colonization), biological traits (e.g., dispersal capacity, maturation age), and environmental heterogeneity (e.g., habitat fragmentation) to improve future predictions of species distribution shifts in response to changing climates. Copyright © 2018 Elsevier B.V. All rights reserved.

  4. Riparian vegetation structure under desertification scenarios

    Science.gov (United States)

    Rosário Fernandes, M.; Segurado, Pedro; Jauch, Eduardo; Ferreira, M. Teresa

    2015-04-01

    Riparian areas are responsible for many ecological and ecosystems services, including the filtering function, that are considered crucial to the preservation of water quality and social benefits. The main goal of this study is to quantify and understand the riparian variability under desertification scenario(s) and identify the optimal riparian indicators for water scarcity and droughts (WS&D), henceforth improving river basin management. This study was performed in the Iberian Tâmega basin, using riparian woody patches, mapped by visual interpretation on Google Earth imagery, along 130 Sampling Units of 250 m long river stretches. Eight riparian structural indicators, related with lateral dimension, weighted area and shape complexity of riparian patches were calculated using Patch Analyst extension for ArcGis 10. A set of 29 hydrological, climatic, and hydrogeomorphological variables were computed, by a water modelling system (MOHID), using monthly meteorological data between 2008 and 2014. Land-use classes were also calculated, in a 250m-buffer surrounding each sampling unit, using a classification based system on Corine Land Cover. Boosted Regression Trees identified Mean-width (MW) as the optimal riparian indicator for water scarcity and drought, followed by the Weighted Class Area (WCA) (classification accuracy =0.79 and 0.69 respectively). Average Flow and Strahler number were consistently selected, by all boosted models, as the most important explanatory variables. However, a combined effect of hidrogeomorphology and land-use can explain the high variability found in the riparian width mainly in Tâmega tributaries. Riparian patches are larger towards Tâmega river mouth although with lower shape complexity, probably related with more continuous and almost monospecific stands. Climatic, hydrological and land use scenarios, singly and combined, were used to quantify the riparian variability responding to these changes, and to assess the loss of riparian

  5. Uranium mobility across annual growth rings in three deciduous tree species.

    Science.gov (United States)

    McHugh, Kelly C; Widom, Elisabeth; Spitz, Henry B; Wiles, Gregory C; Glover, Sam E

    2018-02-01

    Black walnut (Juglans nigra), slippery elm (Ulmus rubra), and white ash (Fraxinus americana) trees were evaluated as potential archives of past uranium (U) contamination. Like other metals, U mobility in annual growth rings of trees is dependent on the tree species. Uranium concentrations and isotopic compositions (masses 234, 235, 236, and 238) were analyzed by thermal ionization mass spectrometry to test the efficacy of using tree rings to retroactively monitor U pollution from the FFMPC, a U purification facility operating from 1951 to 1989. This study found non-natural U (depleted U and detectable 236 U) in growth rings of all three tree species that pre-dated the start of operations at FFMPC and compositional trends that did not correspond with known contamination events. Therefore, the annual growth rings of these tree species cannot be used to reliably monitor the chronology of U contamination. Copyright © 2017 Elsevier Ltd. All rights reserved.

  6. Tree species distribution in temperate forests is more influenced by soil than by climate.

    Science.gov (United States)

    Walthert, Lorenz; Meier, Eliane Seraina

    2017-11-01

    Knowledge of the ecological requirements determining tree species distributions is a precondition for sustainable forest management. At present, the abiotic requirements and the relative importance of the different abiotic factors are still unclear for many temperate tree species. We therefore investigated the relative importance of climatic and edaphic factors for the abundance of 12 temperate tree species along environmental gradients. Our investigations are based on data from 1,075 forest stands across Switzerland including the cold-induced tree line of all studied species and the drought-induced range boundaries of several species. Four climatic and four edaphic predictors represented the important growth factors temperature, water supply, nutrient availability, and soil aeration. The climatic predictors were derived from the meteorological network of MeteoSwiss, and the edaphic predictors were available from soil profiles. Species cover abundances were recorded in field surveys. The explanatory power of the predictors was assessed by variation partitioning analyses with generalized linear models. For six of the 12 species, edaphic predictors were more important than climatic predictors in shaping species distribution. Over all species, abundances depended mainly on nutrient availability, followed by temperature, water supply, and soil aeration. The often co-occurring species responded similar to these growth factors. Drought turned out to be a determinant of the lower range boundary for some species. We conclude that over all 12 studied tree species, soil properties were more important than climate variables in shaping tree species distribution. The inclusion of appropriate soil variables in species distribution models allowed to better explain species' ecological niches. Moreover, our study revealed that the ecological requirements of tree species assessed in local field studies and in experiments are valid at larger scales across Switzerland.

  7. Rocky Mountain Riparian Digest

    Science.gov (United States)

    Deborah M. Finch

    2008-01-01

    The Rocky Mountain Riparian Digest presents the many facets of riparian research at the station. Included are articles about protecting the riparian habitat, the social and economic values of riparian environments, watershed restoration, remote sensing tools, and getting kids interested in the science.

  8. The natural abundance of 15N in litter and soil profiles under six temperate tree species: N cycling depends on tree species traits and site fertility

    DEFF Research Database (Denmark)

    Callesen, Ingeborg; Nilsson, Lars Ola; Schmidt, Inger Kappel

    2013-01-01

    We investigated the influence of tree species on the natural 15N abundance in forest stands under elevated ambient N deposition.We analysed δ15N in litter, the forest floor and three mineral soil horizons along with ecosystem N status variables at six sites planted three decades ago with five Eur...... to nitrate leaching or other N transformation processes....... species leached more nitrate.The δ15N pattern reflected tree species related traits affecting the N cycling as well as site fertility and former land use, and possibly differences in N leaching. The tree species δ15N patterns reflected fractionation caused by uptake of N through mycorrhiza rather than due...

  9. Thematic and spatial resolutions affect model-based predictions of tree species distribution.

    Science.gov (United States)

    Liang, Yu; He, Hong S; Fraser, Jacob S; Wu, ZhiWei

    2013-01-01

    Subjective decisions of thematic and spatial resolutions in characterizing environmental heterogeneity may affect the characterizations of spatial pattern and the simulation of occurrence and rate of ecological processes, and in turn, model-based tree species distribution. Thus, this study quantified the importance of thematic and spatial resolutions, and their interaction in predictions of tree species distribution (quantified by species abundance). We investigated how model-predicted species abundances changed and whether tree species with different ecological traits (e.g., seed dispersal distance, competitive capacity) had different responses to varying thematic and spatial resolutions. We used the LANDIS forest landscape model to predict tree species distribution at the landscape scale and designed a series of scenarios with different thematic (different numbers of land types) and spatial resolutions combinations, and then statistically examined the differences of species abundance among these scenarios. Results showed that both thematic and spatial resolutions affected model-based predictions of species distribution, but thematic resolution had a greater effect. Species ecological traits affected the predictions. For species with moderate dispersal distance and relatively abundant seed sources, predicted abundance increased as thematic resolution increased. However, for species with long seeding distance or high shade tolerance, thematic resolution had an inverse effect on predicted abundance. When seed sources and dispersal distance were not limiting, the predicted species abundance increased with spatial resolution and vice versa. Results from this study may provide insights into the choice of thematic and spatial resolutions for model-based predictions of tree species distribution.

  10. Complementarity of native and introduced tree species: Exploring ...

    African Journals Online (AJOL)

    Given that access to timber from native trees within the protected area is restricted, management of tree resources outside of the protected area represents a critical nexus between biodiversity conservation and human benefits linked to ecosystem services. We investigated and characterized the local farmer's use of ...

  11. Geography, topography, and history affect realized-to-potential tree species richness patterns in Europe

    Science.gov (United States)

    Jens-Christian Svenning; Matthew C. Fitzpatrick; Signe Normand; Catherine H. Graham; Peter B. Pearman; Louis R. Iverson; Flemming. Skov

    2010-01-01

    Environmental conditions and biotic interactions are generally thought to influence local species richness. However, immigration and the evolutionary and historical factors that shape regional species pools should also contribute to determining local species richness because local communities arise by assembly from regional species pools. Using the European tree flora...

  12. Ecology and Conservation of the Critically Endangered Tree Species Gymnocladus assamicus in Arunachal Pradesh, India

    International Nuclear Information System (INIS)

    Choudhury, B.I.; Khan, M.L.; Arunachalam, A.; Das, A.K.

    2007-01-01

    Gymnocladus assamicus is a critically endangered leguminous tree species endemic to Northeast India. Mature pods of the trees yield soap material and are collected by local people for domestic purposes and religious activities. G. assamicus grows on hill slopes and along banks of streams. Male and hermaphrodite flowers are borne by separate individual trees. Altogether 28 mature trees were documented from nine populations. Of these, very few regenerating trees were found. This species regenerates only through seeds. The major constraints to natural regeneration are over harvesting of mature fruits, habitat destruction, grazing, predation of seeds by scatter-hoarding animals, poor percentage of seed germination due to their hard-waxy seed coats, and the lack of seed dispersal. Effective conservation initiatives should emphasize sustainable harvesting of mature pods, awareness among local people, and preservation of surviving individuals of the species. Nonetheless, reintroduction of the species to suitable ecological habitats is also recommended.

  13. Effects of nurse trees, spacing, and tree species on biomass production in mixed forest plantations

    DEFF Research Database (Denmark)

    Nord-Larsen, Thomas; Meilby, Henrik

    2016-01-01

    Growing concern about increasing concentrations of greenhouse gases in the atmosphere, and resulting global climate change, has spurred a growing demand for renewable energy. In this study, we hypothesized that a nurse tree crop may provide additional early yields of biomass for fuel, while...... was in most cases reduced due to competition. However, provided timely thinning of nurse trees, the qualitative development of the trees will allow for long-term timber production....

  14. No evidence for consistent long-term growth stimulation of 13 tropical tree species: results from tree-ring analysis.

    Science.gov (United States)

    Groenendijk, Peter; van der Sleen, Peter; Vlam, Mart; Bunyavejchewin, Sarayudh; Bongers, Frans; Zuidema, Pieter A

    2015-10-01

    The important role of tropical forests in the global carbon cycle makes it imperative to assess changes in their carbon dynamics for accurate projections of future climate-vegetation feedbacks. Forest monitoring studies conducted over the past decades have found evidence for both increasing and decreasing growth rates of tropical forest trees. The limited duration of these studies restrained analyses to decadal scales, and it is still unclear whether growth changes occurred over longer time scales, as would be expected if CO2 -fertilization stimulated tree growth. Furthermore, studies have so far dealt with changes in biomass gain at forest-stand level, but insights into species-specific growth changes - that ultimately determine community-level responses - are lacking. Here, we analyse species-specific growth changes on a centennial scale, using growth data from tree-ring analysis for 13 tree species (~1300 trees), from three sites distributed across the tropics. We used an established (regional curve standardization) and a new (size-class isolation) growth-trend detection method and explicitly assessed the influence of biases on the trend detection. In addition, we assessed whether aggregated trends were present within and across study sites. We found evidence for decreasing growth rates over time for 8-10 species, whereas increases were noted for two species and one showed no trend. Additionally, we found evidence for weak aggregated growth decreases at the site in Thailand and when analysing all sites simultaneously. The observed growth reductions suggest deteriorating growth conditions, perhaps due to warming. However, other causes cannot be excluded, such as recovery from large-scale disturbances or changing forest dynamics. Our findings contrast growth patterns that would be expected if elevated CO2 would stimulate tree growth. These results suggest that commonly assumed growth increases of tropical forests may not occur, which could lead to erroneous

  15. CpDNA-based species identification and phylogeography: application to African tropical tree species.

    Science.gov (United States)

    Duminil, J; Heuertz, M; Doucet, J-L; Bourland, N; Cruaud, C; Gavory, F; Doumenge, C; Navascués, M; Hardy, O J

    2010-12-01

    Despite the importance of the African tropical rainforests as a hotspot of biodiversity, their history and the processes that have structured their biodiversity are understood poorly. With respect to past demographic processes, new insights can be gained through characterizing the distribution of genetic diversity. However, few studies of this type have been conducted in Central Africa, where the identification of species in the field can be difficult. We examine here the distribution of chloroplast DNA (cpDNA) diversity in Lower Guinea in two tree species that are difficult to distinguish, Erythrophleum ivorense and Erythrophleum suaveolens (Fabaceae). By using a blind-sampling approach and comparing molecular and morphological markers, we first identified retrospectively all sampled individuals and determined the limits of the distribution of each species. We then performed a phylogeographic study using the same genetic data set. The two species displayed essentially parapatric distributions that were correlated well with the rainfall gradient, which indicated different ecological requirements. In addition, a phylogeographic structure was found for E. suaveolens and, for both species, substantially higher levels of diversity and allelic endemism were observed in the south (Gabon) than in the north (Cameroon) of the Lower Guinea region. This finding indicated different histories of population demographics for the two species, which might reflect different responses to Quaternary climate changes. We suggest that a recent period of forest perturbation, which might have been caused by humans, favoured the spread of these two species and that their poor recruitment at present results from natural succession in their forest formations. © 2010 Blackwell Publishing Ltd.

  16. Estimating tree species richness from forest inventory plot data

    Science.gov (United States)

    Ronald E. McRoberts; Dacia M. Meneguzzo

    2007-01-01

    Montreal Process Criterion 1, Conservation of Biological Diversity, expresses species diversity in terms of number of forest dependent species. Species richness, defined as the total number of species present, is a common metric for analyzing species diversity. A crucial difficulty in estimating species richness from sample data obtained from sources such as inventory...

  17. Allometric biomass equations for 12 tree species in coniferous and broadleaved mixed forests, Northeastern China.

    Science.gov (United States)

    He, Huaijiang; Zhang, Chunyu; Zhao, Xiuhai; Fousseni, Folega; Wang, Jinsong; Dai, Haijun; Yang, Song; Zuo, Qiang

    2018-01-01

    Understanding forest carbon budget and dynamics for sustainable resource management and ecosystem functions requires quantification of above- and below-ground biomass at individual tree species and stand levels. In this study, a total of 122 trees (9-12 per species) were destructively sampled to determine above- and below-ground biomass of 12 tree species (Acer mandshuricum, Acer mono, Betula platyphylla, Carpinus cordata, Fraxinus mandshurica, Juglans mandshurica, Maackia amurensis, P. koraiensis, Populus ussuriensis, Quercus mongolica, Tilia amurensis and Ulmus japonica) in coniferous and broadleaved mixed forests of Northeastern China, an area of the largest natural forest in the country. Biomass allocation was examined and biomass models were developed using diameter as independent variable for individual tree species and all species combined. The results showed that the largest biomass allocation of all species combined was on stems (57.1%), followed by coarse root (21.3%), branch (18.7%), and foliage (2.9%). The log-transformed model was statistically significant for all biomass components, although predicting power was higher for species-specific models than for all species combined, general biomass models, and higher for stems, roots, above-ground biomass, and total tree biomass than for branch and foliage biomass. These findings supplement the previous studies on this forest type by additional sample trees, species and locations, and support biomass research on forest carbon budget and dynamics by management activities such as thinning and harvesting in the northeastern part of China.

  18. Important LiDAR metrics for discriminating forest tree species in Central Europe

    Science.gov (United States)

    Shi, Yifang; Wang, Tiejun; Skidmore, Andrew K.; Heurich, Marco

    2018-03-01

    Numerous airborne LiDAR-derived metrics have been proposed for classifying tree species. Yet an in-depth ecological and biological understanding of the significance of these metrics for tree species mapping remains largely unexplored. In this paper, we evaluated the performance of 37 frequently used LiDAR metrics derived under leaf-on and leaf-off conditions, respectively, for discriminating six different tree species in a natural forest in Germany. We firstly assessed the correlation between these metrics. Then we applied a Random Forest algorithm to classify the tree species and evaluated the importance of the LiDAR metrics. Finally, we identified the most important LiDAR metrics and tested their robustness and transferability. Our results indicated that about 60% of LiDAR metrics were highly correlated to each other (|r| > 0.7). There was no statistically significant difference in tree species mapping accuracy between the use of leaf-on and leaf-off LiDAR metrics. However, combining leaf-on and leaf-off LiDAR metrics significantly increased the overall accuracy from 58.2% (leaf-on) and 62.0% (leaf-off) to 66.5% as well as the kappa coefficient from 0.47 (leaf-on) and 0.51 (leaf-off) to 0.58. Radiometric features, especially intensity related metrics, provided more consistent and significant contributions than geometric features for tree species discrimination. Specifically, the mean intensity of first-or-single returns as well as the mean value of echo width were identified as the most robust LiDAR metrics for tree species discrimination. These results indicate that metrics derived from airborne LiDAR data, especially radiometric metrics, can aid in discriminating tree species in a mixed temperate forest, and represent candidate metrics for tree species classification and monitoring in Central Europe.

  19. Anchoring quartet-based phylogenetic distances and applications to species tree reconstruction.

    Science.gov (United States)

    Sayyari, Erfan; Mirarab, Siavash

    2016-11-11

    Inferring species trees from gene trees using the coalescent-based summary methods has been the subject of much attention, yet new scalable and accurate methods are needed. We introduce DISTIQUE, a new statistically consistent summary method for inferring species trees from gene trees under the coalescent model. We generalize our results to arbitrary phylogenetic inference problems; we show that two arbitrarily chosen leaves, called anchors, can be used to estimate relative distances between all other pairs of leaves by inferring relevant quartet trees. This results in a family of distance-based tree inference methods, with running times ranging between quadratic to quartic in the number of leaves. We show in simulated studies that DISTIQUE has comparable accuracy to leading coalescent-based summary methods and reduced running times.

  20. Use of tree species by White-throated treerunner (Pygarrhichas albogularis King) in a secondary native forest of southern Chile

    OpenAIRE

    Gantz, Alberto; Yañez, Miguel; Orellana, José I.; Sade, Soraya; Valdivia, Carlos E.

    2015-01-01

    ABSTRACT In forest ecosystems, numerous species of insectivorous birds use certain tree species as feeding and nesting substrates. Between 2009 and 2010, the use of different floristic components as feeding substrate by the Pygarrhichas albogularis King, 1831 was evaluated in a southern Chilean secondary native forest. From a total of 13 trees and bush species, six tree species were used by P. albogularis as a feeding substrate. Tree use was limited to intermediate heights (11-20 m) and, main...

  1. Nutritional composition of five food trees species products used in ...

    African Journals Online (AJOL)

    SAM

    2014-04-23

    Apr 23, 2014 ... Industrielle et Bioinformatique, UFR Sciences de la Vie et de la Terre, ... Consumption of these tree products can help to overcome nutrients deficiency that is ..... ket place Innovation and the National Institute for Agricul-.

  2. Carbon and nitrogen in forest floor and mineral soil under six common European tree species

    DEFF Research Database (Denmark)

    Vesterdal, Lars; Schmidt, Inger K.; Callesen, Ingeborg

    2007-01-01

    The knowledge of tree species effects on soil C and N pools is scarce, particularly for European deciduous tree species. We studied forest floor and mineral soil carbon and nitrogen under six common European tree species in a common garden design replicated at six sites in Denmark. Three decades...... on forest floor C and N content was primarily attributed to large differences in turnover rates as indicated by fractional annual loss of forest floor C and N. The C/N ratio of foliar litterfall was a good indicator of forest floor C and N contents, fractional annual loss of forest floor C and N...

  3. Tree diversity and species identity effects on soil fungi, protists and animals are context dependent.

    Science.gov (United States)

    Tedersoo, Leho; Bahram, Mohammad; Cajthaml, Tomáš; Põlme, Sergei; Hiiesalu, Indrek; Anslan, Sten; Harend, Helery; Buegger, Franz; Pritsch, Karin; Koricheva, Julia; Abarenkov, Kessy

    2016-02-01

    Plant species richness and the presence of certain influential species (sampling effect) drive the stability and functionality of ecosystems as well as primary production and biomass of consumers. However, little is known about these floristic effects on richness and community composition of soil biota in forest habitats owing to methodological constraints. We developed a DNA metabarcoding approach to identify the major eukaryote groups directly from soil with roughly species-level resolution. Using this method, we examined the effects of tree diversity and individual tree species on soil microbial biomass and taxonomic richness of soil biota in two experimental study systems in Finland and Estonia and accounted for edaphic variables and spatial autocorrelation. Our analyses revealed that the effects of tree diversity and individual species on soil biota are largely context dependent. Multiple regression and structural equation modelling suggested that biomass, soil pH, nutrients and tree species directly affect richness of different taxonomic groups. The community composition of most soil organisms was strongly correlated due to similar response to environmental predictors rather than causal relationships. On a local scale, soil resources and tree species have stronger effect on diversity of soil biota than tree species richness per se.

  4. Leapfrogging of tree species provenances? Interaction of microclimate and genetics on upward shifts in tree species' range limits

    Science.gov (United States)

    Reinhardt, K.; Castanha, C.; Germino, M. J.; Kueppers, L. M.

    2011-12-01

    The elevation limit of tree growth (alpine treeline) is considered to be constrained by environmental (i.e., thermal) and genetic (i.e., inability to adapt to climatic conditions) limitations to growth. Warming conditions due to climate change are predicted to cause upward shifts in the elevation of alpine treelines, through relief of cold-induced physiological limitations on seedling recruitment beyond current treeline boundaries. To determine how genetics and climate may interact to affect seedling establishment, we transplanted recently germinated seedlings from high- and low-elevation provenances (HI and LO, respectively) of Pinus flexilis in common gardens arrayed along an elevation and canopy gradient from subalpine forest into the alpine zone at Niwot Ridge, CO. We compared differences in microclimate and seedling ecophysiology among sites and between provenances. During the first summer of growth, frequently cloudy skies resulted in similar solar radiation incidence and air and soil temperatures among sites, despite nearly a 500 m-span in elevation across all sites. Preliminary findings suggest that survival of seedlings was similar between the lowest and highest elevations, with greater survival of LO (60%) compared to HI (40%) seedlings at each of these sites. Photosynthesis, carbon balance (photosynthesis/respiration), and conductance increased more than 2X with elevation for both provenances, and were 35-77% greater in LO seedlings compared to HI seedlings. There were no differences in dark-adapted chlorophyll fluorescence (Fv/Fm) among sites or between provenances. However, in a common-garden study at low elevation, we observed no differences in carbon or water relations between two naturally-germinated mitochondrial haplotypes of P. flexilis (of narrow and wide-ranging distributions). We did observe water-related thresholds on seedling carbon balance and survival that occurred when soil volumetric water content dropped below 10% and seedling water

  5. Object-based methods for individual tree identification and tree species classification from high-spatial resolution imagery

    Science.gov (United States)

    Wang, Le

    2003-10-01

    Modern forest management poses an increasing need for detailed knowledge of forest information at different spatial scales. At the forest level, the information for tree species assemblage is desired whereas at or below the stand level, individual tree related information is preferred. Remote Sensing provides an effective tool to extract the above information at multiple spatial scales in the continuous time domain. To date, the increasing volume and readily availability of high-spatial-resolution data have lead to a much wider application of remotely sensed products. Nevertheless, to make effective use of the improving spatial resolution, conventional pixel-based classification methods are far from satisfactory. Correspondingly, developing object-based methods becomes a central challenge for researchers in the field of Remote Sensing. This thesis focuses on the development of methods for accurate individual tree identification and tree species classification. We develop a method in which individual tree crown boundaries and treetop locations are derived under a unified framework. We apply a two-stage approach with edge detection followed by marker-controlled watershed segmentation. Treetops are modeled from radiometry and geometry aspects. Specifically, treetops are assumed to be represented by local radiation maxima and to be located near the center of the tree-crown. As a result, a marker image was created from the derived treetop to guide a watershed segmentation to further differentiate overlapping trees and to produce a segmented image comprised of individual tree crowns. The image segmentation method developed achieves a promising result for a 256 x 256 CASI image. Then further effort is made to extend our methods to the multiscales which are constructed from a wavelet decomposition. A scale consistency and geometric consistency are designed to examine the gradients along the scale-space for the purpose of separating true crown boundary from unwanted

  6. Earthworm abundance and species composition in abandoned tropical croplands: comparisons of tree plantations and secondary forests.

    Science.gov (United States)

    G. Gonzalez; X. Zou; S. Borges

    1996-01-01

    We compared patterns of earthworms abundance and species composition in tree plantation and secondary forest of Puerto Rico. Tree plantations included pine (Pinus caribea Morelet) and mahogany (Swietenia macrophylla King) established in the 1930's; 1960's; and 1970's; secondary forests were naturally regenerated in areas adjacent to these plantations. We...

  7. Growth of 11 introduced tree species on selected forest sites in Hawaii

    Science.gov (United States)

    Michael G Buck; Roger H. Imoto

    1982-01-01

    Growth and volume data for trees on 25 plots reprsenting 11 introduced species in Hawaii were recorded during a 21-year period. Tree were measured at about 5-year intervals to determine overall growth and stand development. The sites selected were considered better-than-average in terms of elevation, amount of precipitation, and soil quality. Except for redwood, stands...

  8. tree and shrub species integration in the crop-livestock farming ...

    African Journals Online (AJOL)

    Prof. Adipala Ekwamu

    cash for investment in the required activities, easy land certification and market opportunity for tree and shrub products. The tree and shrub .... for its consistency, logical flow, coding and length were amended. .... TABLE 2. List of shrub species identified in the watershed of highlands of central Ethiopia. Scientific name.

  9. Comprehensive database of diameter-based biomass regressions for North American tree species

    Science.gov (United States)

    Jennifer C. Jenkins; David C. Chojnacky; Linda S. Heath; Richard A. Birdsey

    2004-01-01

    A database consisting of 2,640 equations compiled from the literature for predicting the biomass of trees and tree components from diameter measurements of species found in North America. Bibliographic information, geographic locations, diameter limits, diameter and biomass units, equation forms, statistical errors, and coefficients are provided for each equation,...

  10. Summer droughts limit tree growth across 10 temperate species on a productive forest site

    NARCIS (Netherlands)

    Weemstra, M.; Eilmann, B.; Sass-Klaassen, U.; Sterck, F.J.

    2013-01-01

    Studies on climate impacts on tree annual growth are mainly restricted to marginal sites. To date, the climate effects on annual growth of trees in favorable environments remain therefore unclear despite the importance of these sites in terms of forest productivity. Because species respond

  11. Degree of susceptibility of industrial gases of tree and shrub species

    Energy Technology Data Exchange (ETDEWEB)

    Dobrovoljskii, I A

    1952-01-01

    The trees and shrubs of the iron smelting region of Krivoi Rog, in the Ukraine, were surveyed to determine susceptibility to air pollution damage. Most of the observations were made in parks and green belts in industrial areas. A classification of tree and shrub species is presented; they are separated into three classes according to their susceptibility to air pollutant injury.

  12. Dominance of legume trees alters nutrient relations in mixed species forest restoration plantings within seven years

    Science.gov (United States)

    Ilyas Siddique; Vera Lex Engel; David Lamb; Gabriela B. Nardoto; Jean P.H.B. Ometto; Luiz A. Martinelli; Susanne. Schmidt

    2008-01-01

    Failures in reforestation are often attributed to nutrient limitation for tree growth. We compared tree performance and nitrogen and phosphorus relations in adjacent mixed-species plantings of contrasting composition, established for forest restoration on Ultisol soil, originally covered by tropical semi-deciduous Atlantic Forest in Southeast Brazil. Nutrient relations...

  13. Species divergence and phylogenetic variation of ecophysiological traits in lianas and trees.

    Science.gov (United States)

    Rios, Rodrigo S; Salgado-Luarte, Cristian; Gianoli, Ernesto

    2014-01-01

    The climbing habit is an evolutionary key innovation in plants because it is associated with enhanced clade diversification. We tested whether patterns of species divergence and variation of three ecophysiological traits that are fundamental for plant adaptation to light environments (maximum photosynthetic rate [A(max)], dark respiration rate [R(d)], and specific leaf area [SLA]) are consistent with this key innovation. Using data reported from four tropical forests and three temperate forests, we compared phylogenetic distance among species as well as the evolutionary rate, phylogenetic distance and phylogenetic signal of those traits in lianas and trees. Estimates of evolutionary rates showed that R(d) evolved faster in lianas, while SLA evolved faster in trees. The mean phylogenetic distance was 1.2 times greater among liana species than among tree species. Likewise, estimates of phylogenetic distance indicated that lianas were less related than by chance alone (phylogenetic evenness across 63 species), and trees were more related than expected by chance (phylogenetic clustering across 71 species). Lianas showed evenness for R(d), while trees showed phylogenetic clustering for this trait. In contrast, for SLA, lianas exhibited phylogenetic clustering and trees showed phylogenetic evenness. Lianas and trees showed patterns of ecophysiological trait variation among species that were independent of phylogenetic relatedness. We found support for the expected pattern of greater species divergence in lianas, but did not find consistent patterns regarding ecophysiological trait evolution and divergence. R(d) followed the species-level pattern, i.e., greater divergence/evolution in lianas compared to trees, while the opposite occurred for SLA and no pattern was detected for A(max). R(d) may have driven lianas' divergence across forest environments, and might contribute to diversification in climber clades.

  14. Propagation of Native Tree Species to Restore Subtropical Evergreen Broad-Leaved Forests in SW China

    Directory of Open Access Journals (Sweden)

    Yang Lu

    2016-01-01

    Full Text Available Subtropical evergreen broad-leaved forest (EBLF is a widespread vegetation type throughout East Asia that has suffered extensive deforestation and fragmentation. Selection and successful propagation of native tree species are important for improving ecological restoration of these forests. We carried out a series of experiments to study the propagation requirements of indigenous subtropical tree species in Southwest China. Seeds of 21 tree species collected from the natural forest were materials for the experiment. This paper examines the seed germination and seedling growth performance of these species in a nursery environment. Germination percentages ranged from 41% to 96% and were ≥50% for 19 species. The median length of germination time (MLG ranged from 24 days for Padus wilsonii to 144 days for Ilex polyneura. Fifteen species can reach the transplant size (≥15 cm in height within 12 months of seed collection. Nursery-grown seedlings for each species were planted in degraded site. Two years after planting, the seedling survival rate was >50% in 18 species and >80% in 12 species. Based on these results, 17 species were recommended as appropriate species for nursery production in forest restoration projects. Our study contributes additional knowledge regarding the propagation techniques for various native subtropical tree species in nurseries for forest restoration.

  15. Shifts in relative stocking of common tree species in Kentucky from 1975 to 2004

    Science.gov (United States)

    Christopher M. Oswalt; Jeffrey A. Stringer; Jeffery A. Turner

    2008-01-01

    Changes in species-specific relative stocking indicate the extent to which a species is either increasing or decreasing in a particular system. Changes in relative stocking values of common tree species in Kentucky from 1988 to 2004 were compared to values calculated for 1975 to 1988. Mean annual increase in relative stocking between 1988 and 2004 was greatest for...

  16. Effects of species biological traits and environmental heterogeneity on simulated tree species distribution shifts under climate change

    Science.gov (United States)

    Wen J. Wang; Hong S. He; Frank R. Thompson; Martin A. Spetich; Jacob S. Fraser

    2018-01-01

    Demographic processes (fecundity, dispersal, colonization, growth, and mortality) and their interactions with environmental changes are notwell represented in current climate-distribution models (e.g., niche and biophysical process models) and constitute a large uncertainty in projections of future tree species distribution shifts.We investigate how species biological...

  17. Spatial distribution of seeds and seedlings of two tropical tree species: Is there correspondence between patterns?

    International Nuclear Information System (INIS)

    Parrado Rosselli, Angela

    2007-01-01

    The spatial patterns of seed and seedling distribution relative to parent trees (seed and seedling shadow, respectively) were studied for Dacryodes chimantensis (Burseraceae) and Brosimum utile (Moraceae), two common tree species of terra firme forests of Colombian Amazonia. The general objective was to assess whether the patterns imposed by seed dispersal change or persist in subsequent life stages occurring during the transition from seeds/saplings to adult stages. Seed and seedling shadows on the ground were characterized for each tree species along four 50-m radial transects from the base of the parent tree. Causes of seed and seedling predation as a function of distance to the parent tree were determined, as well as the spatial consistency between life stages. Results showed that seed density of both Dacryodes and Brosimum declined leptokurtically with distance, and it was skewed towards the parent tree. However, seed density was more skewed and leptokurtic in Dacryodes than in Brosimum. The overall trend was maintained in the seedling stage of both species and was positively correlated with the distribution patterns of seeds. Seed and seedling predation were positively correlated with density and negatively correlated with the distance from the parent tree. Factors that could be generating the high consistency between the spatial patterns of seed and seedling distribution are discussed, as well as its implications in the population structure of both species and the debate on the factors that influence the spatial distribution of plant species in tropical rain forests.

  18. New flux based dose–response relationships for ozone for European forest tree species

    International Nuclear Information System (INIS)

    Büker, P.; Feng, Z.; Uddling, J.; Briolat, A.; Alonso, R.; Braun, S.; Elvira, S.; Gerosa, G.; Karlsson, P.E.; Le Thiec, D.

    2015-01-01

    To derive O 3 dose–response relationships (DRR) for five European forest trees species and broadleaf deciduous and needleleaf tree plant functional types (PFTs), phytotoxic O 3 doses (PODy) were related to biomass reductions. PODy was calculated using a stomatal flux model with a range of cut-off thresholds (y) indicative of varying detoxification capacities. Linear regression analysis showed that DRR for PFT and individual tree species differed in their robustness. A simplified parameterisation of the flux model was tested and showed that for most non-Mediterranean tree species, this simplified model led to similarly robust DRR as compared to a species- and climate region-specific parameterisation. Experimentally induced soil water stress was not found to substantially reduce PODy, mainly due to the short duration of soil water stress periods. This study validates the stomatal O 3 flux concept and represents a step forward in predicting O 3 damage to forests in a spatially and temporally varying climate. - Highlights: • We present new ozone flux based dose–response relationships for European trees. • The model-based study accounted for the soil water effect on stomatal flux. • Different statistically derived ozone flux thresholds were applied. • Climate region specific parameterisation often outperformed simplified parameterisation. • Findings could help redefining critical levels for ozone effects on trees. - New stomatal flux based ozone dose–response relationships for tree species are derived for the regional risk assessment of ozone effects on European forest ecosystems.

  19. Multi-phenology WorldView-2 imagery improves remote sensing of savannah tree species

    CSIR Research Space (South Africa)

    Madonsela, Sabelo

    2017-06-01

    Full Text Available and a spectral configuration encompassing important spectral regions not previously available for vegetation mapping. This study investigated i) the benefits of the eight-band WorldView-2 (WV-2) spectral configuration for discriminating tree species...

  20. Species-level para- and polyphyly in DNA barcode gene trees

    DEFF Research Database (Denmark)

    Mutanen, Marko; Kivelä, Sami M.; Vos, Rutger A.

    2016-01-01

    was paid to accurate species identification to ensure data integrity. We investigated the effects of tree-building method, sampling effort, and other methodological issues, all of which can influence estimates of non-monophyly. We found a 12% incidence of non-monophyly, a value significantly lower than...... between species and gene genealogies, as indicated by situations where conspecific individuals do not form a monophyletic cluster in a gene tree. In two previous reviews, non-monophyly has been reported as being common in mitochondrial DNA gene trees. We developed a novel web service "Monophylizer......" to detect non-monophyly in phylogenetic trees and used it to ascertain the incidence of species non-monophyly in COI (a.k.a. cox1) barcode sequence data from 4977 species and 41,583 specimens of European Lepidoptera, the largest data set of DNA barcodes analyzed from this regard. Particular attention...

  1. Guild of Frugivores on three fruit-producing tree species Polyscias ...

    African Journals Online (AJOL)

    Guild of Frugivores on three fruit-producing tree species Polyscias fulva, Syzyguim Guineensis SUBSP. Bamensdae and Pouteria Altissima ) in Ngel Nyaki Forest Reserve, a Montane Forest Ecosystem in Nigeria.

  2. Promotion of adventitious root formation of difficult-to-root hardwood tree species

    Science.gov (United States)

    Paula M. Pijut; Keith E. Woeste; Charles H. Michler

    2011-01-01

    North American hardwood tree species, such as alder (Alnus spp.), ash (Fraxinus spp.), basswood (Tilia spp.), beech (Fagus spp.), birch (Betula spp.), black cherry (Prunus seratina), black walnut (Juglans nigra), black willow (...

  3. composition and size class structure of tree species in ihang'ana

    African Journals Online (AJOL)

    nb

    Previous plant biodiversity studies in this ecosystem concentrated on large-sized Forest ... assess tree species composition, structure and diversity in Ihang'ana FR (2982 ha), one of the ..... Dombeya rotundifolia. (Hochst) ... Ficus lutea. Vahl.

  4. Leaf development and photosynthetic properties of three tropical tree species with delayed greening

    NARCIS (Netherlands)

    Cai, Z.Q.; Slot, M.; Fan, Z.X.

    2005-01-01

    Leaf developmental patterns were characterized for three tropical tree species with delayed greening. Changes in the pigment contents, photosynthetic capacity, stomata development, photosystem 2 efficiency, rate of energy dissipation, and the activity of partial protective enzymes were followed in

  5. Estimating tree species diversity in the savannah using NDVI and woody canopy cover

    CSIR Research Space (South Africa)

    Madonsela, Sabelo

    2018-04-01

    Full Text Available Remote sensing applications in biodiversity research often rely on the establishment of relationships between spectral information from the image and tree species diversity measured in the field. Most studies have used normalized difference...

  6. Species-Level Differences in Hyperspectral Metrics among Tropical Rainforest Trees as Determined by a Tree-Based Classifier

    Directory of Open Access Journals (Sweden)

    Dar A. Roberts

    2012-06-01

    Full Text Available This study explores a method to classify seven tropical rainforest tree species from full-range (400–2,500 nm hyperspectral data acquired at tissue (leaf and bark, pixel and crown scales using laboratory and airborne sensors. Metrics that respond to vegetation chemistry and structure were derived using narrowband indices, derivative- and absorption-based techniques, and spectral mixture analysis. We then used the Random Forests tree-based classifier to discriminate species with minimally-correlated, importance-ranked metrics. At all scales, best overall accuracies were achieved with metrics derived from all four techniques and that targeted chemical and structural properties across the visible to shortwave infrared spectrum (400–2500 nm. For tissue spectra, overall accuracies were 86.8% for leaves, 74.2% for bark, and 84.9% for leaves plus bark. Variation in tissue metrics was best explained by an axis of red absorption related to photosynthetic leaves and an axis distinguishing bark water and other chemical absorption features. Overall accuracies for individual tree crowns were 71.5% for pixel spectra, 70.6% crown-mean spectra, and 87.4% for a pixel-majority technique. At pixel and crown scales, tree structure and phenology at the time of image acquisition were important factors that determined species spectral separability.

  7. Predicting spatial variations of tree species richness in tropical forests from high-resolution remote sensing.

    Science.gov (United States)

    Fricker, Geoffrey A; Wolf, Jeffrey A; Saatchi, Sassan S; Gillespie, Thomas W

    2015-10-01

    There is an increasing interest in identifying theories, empirical data sets, and remote-sensing metrics that can quantify tropical forest alpha diversity at a landscape scale. Quantifying patterns of tree species richness in the field is time consuming, especially in regions with over 100 tree species/ha. We examine species richness in a 50-ha plot in Barro Colorado Island in Panama and test if biophysical measurements of canopy reflectance from high-resolution satellite imagery and detailed vertical forest structure and topography from light detection and ranging (lidar) are associated with species richness across four tree size classes (>1, 1-10, >10, and >20 cm dbh) and three spatial scales (1, 0.25, and 0.04 ha). We use the 2010 tree inventory, including 204,757 individuals belonging to 301 species of freestanding woody plants or 166 ± 1.5 species/ha (mean ± SE), to compare with remote-sensing data. All remote-sensing metrics became less correlated with species richness as spatial resolution decreased from 1.0 ha to 0.04 ha and tree size increased from 1 cm to 20 cm dbh. When all stems with dbh > 1 cm in 1-ha plots were compared to remote-sensing metrics, standard deviation in canopy reflectance explained 13% of the variance in species richness. The standard deviations of canopy height and the topographic wetness index (TWI) derived from lidar were the best metrics to explain the spatial variance in species richness (15% and 24%, respectively). Using multiple regression models, we made predictions of species richness across Barro Colorado Island (BCI) at the 1-ha spatial scale for different tree size classes. We predicted variation in tree species richness among all plants (adjusted r² = 0.35) and trees with dbh > 10 cm (adjusted r² = 0.25). However, the best model results were for understory trees and shrubs (dbh 1-10 cm) (adjusted r² = 0.52) that comprise the majority of species richness in tropical forests. Our results indicate that high

  8. Tree species diversity in the Eastern Ghats of northern Andhra Pradesh, India

    Directory of Open Access Journals (Sweden)

    M. Tarakeswara Naidu

    2015-06-01

    Full Text Available The present study was conducted to analyze tree species diversity in the tropical forests of the Eastern Ghats of northern Andhra Pradesh, India.  A total of 270 species of trees (≥15cm girth at breast height pertaining to 177 genera belonging to 55 families were recorded.  Among the 270 species, 141 species were observed to be common, 78 were occasional and 51 species were rare in the study area.  Fabaceae was the dominant family with 33 species followed by Rubiaceae with 15 species and Malvaceae, Moraceae and Phyllanthaceae with 13 species each.  The genera with the highest number of species include Ficus (12 species, Diospyros (8 species, Albizia and Grewia (6 species each, Acacia and Bauhinia (5 species each.  Forty-five percent of the species were indigenous. This illustrates the diversity of the tree species in the studied area of the Eastern Ghats and also emphasizes the need for their conservation. 

  9. Climate Responses in Growth and Wood Anatomy of Imoprtant Forest Tree Species in Denmark

    DEFF Research Database (Denmark)

    Huang, Weiwei

    and high temperatures on the development of Danish tree species are scarcely investigated. Through a dendroecological approach this dissertation assessed the growth responses related to increment, xylem anatomy and wood property of eight different important tree species, namely Picea abies (L.) Karst......., Picea sitchensis (Bong.) Carr., Abies alba Mill., Abies grandis (Dougl.) Lindl., Pseudotsuga mensiesii (Mirb.) Franco, Larix kaempferi (Lamb.) Carr., Quercus robur L. and Fagus sylvatica L., to long-term drought and high temperatures, aiming at identifying a species portfolio matching future climate...... intolerant species, mainly due to their low drought tolerance (both species) and susceptibility to high autumn temperature (only P. abies). Overall, this dissertation improves the understanding of how drought and high temperatures have impacted and will influence the growth of tree species in Danish forest...

  10. Predicting climate change extirpation risk for central and southern Appalachian forest tree species

    Science.gov (United States)

    Kevin M. Potter; William W. Hargrove; Frank H. Koch

    2010-01-01

    Climate change will likely pose a severe threat to the viability of certain forest tree species, which will be forced either to adapt to new conditions or to shift to more favorable environments if they are to survive. Several forest tree species of the central and southern Appalachians may be at particular risk, since they occur in limited high-elevation ranges and/or...

  11. STANDING HERBAGE BIOMASS UNDER DIFFERENT TREE SPECIES DISPERSED IN PASTURES OF CATTLE FARMS

    Directory of Open Access Journals (Sweden)

    Humberto Esquivel-Mimenza

    2013-08-01

    Full Text Available The study conducted in a tropical dry ecosystem at Cañas, Guanacaste, Costa Rica (10o 11´ N and 84o15´W measure the standing herbage biomass (SHB availability and quality under six isolated tree species of different canopy architecture dispersed in active Brachiaria brizantha pastures and compare it to that growing at full sun light. Standing herbage biomass (HB harvesting and Photosynthetic active radiation (PAR readings were taken at three different periods in a paired sample scheme. Of the six tree species studied, Enterolobium cyclocarpum had the largest mean crown cover while Acrocomia aculeata had the smallest. Significant differences were observed between species (P = 0.0002 and seasons (P<0.008 for the percentage of PAR transmitted under the canopy but PAR levels obtained under all species were consistent throughout seasons since the interaction between species and season was not significantly different (P=0.98. Lower PAR readings (<50% were taken under the canopies E. cyclocarpum and Guazuma ulmifolia (21.7 and 33.7 % respectively. Standing herbage biomass (SHB harvested under the crown of isolated mature individual tree species was significantly lower (P<0.001 than in open pasture areas for all tree species except that of A. aculeate but SHB crude protein content, was higher underneath all tree canopies. It can conclude that light reduction caused by tree canopies reduces SHB availability and increases the quality underneath tree canopies compared to areas of full sun but these varies accordingly to tree species and seasons.

  12. Mapping forest tree species over large areas with partially cloudy Landsat imagery

    Science.gov (United States)

    Turlej, K.; Radeloff, V.

    2017-12-01

    Forests provide numerous services to natural systems and humankind, but which services forest provide depends greatly on their tree species composition. That makes it important to track not only changes in forest extent, something that remote sensing excels in, but also to map tree species. The main goal of our work was to map tree species with Landsat imagery, and to identify how to maximize mapping accuracy by including partially cloudy imagery. Our study area covered one Landsat footprint (26/28) in Northern Wisconsin, USA, with temperate and boreal forests. We selected this area because it contains numerous tree species and variable forest composition providing an ideal study area to test the limits of Landsat data. We quantified how species-level classification accuracy was affected by a) the number of acquisitions, b) the seasonal distribution of observations, and c) the amount of cloud contamination. We classified a single year stack of Landsat-7, and -8 images data with a decision tree algorithm to generate a map of dominant tree species at the pixel- and stand-level. We obtained three important results. First, we achieved producer's accuracies in the range 70-80% and user's accuracies in range 80-90% for the most abundant tree species in our study area. Second, classification accuracy improved with more acquisitions, when observations were available from all seasons, and is the best when images with up to 40% cloud cover are included. Finally, classifications for pure stands were 10 to 30 percentage points better than those for mixed stands. We conclude that including partially cloudy Landsat imagery allows to map forest tree species with accuracies that were previously only possible for rare years with many cloud-free observations. Our approach thus provides important information for both forest management and science.

  13. Levantamento florístico do componente arbustivo-arbóreo da vegetação ciliar na bacia do rio Taperoá, PB, Brasil Floristic survey of components of shrub-tree riparian vegetation in the Taperoá river basin, Paraíba State, Brasil

    Directory of Open Access Journals (Sweden)

    Alecksandra Vieira de Lacerda

    2005-09-01

    drawn to the scale 1:100,000 and through walks carried out at random for collecting plant material. The plants were identified by comparing their morphology to the collection housed at the Herbarium Lauro Pires Xavier (Universidade Federal da Paraíba, João Pessoa, PB, and by consultation to the specialized bibliography and to botanical experts. The shrub-tree riparian vegetation from the nine sampling sites was represented by 43 plant species, from which 41 belong to 19 families and two species were not determined. The families with the largest number of species were: Mimosaceae (seven, Caesalpiniaceae (five, and Euphorbiaceae (five. The cluster analysis showed that the riparian areas had a particular distinguishing feature with respect to floristic composition, as indicated by the low similarity index estimated among the sampled areas.

  14. Growth strategies of tropical tree species: disentangling light and size effects.

    Directory of Open Access Journals (Sweden)

    Nadja Rüger

    Full Text Available An understanding of the drivers of tree growth at the species level is required to predict likely changes of carbon stocks and biodiversity when environmental conditions change. Especially in species-rich tropical forests, it is largely unknown how species differ in their response of growth to resource availability and individual size. We use a hierarchical bayesian approach to quantify the impact of light availability and tree diameter on growth of 274 woody species in a 50-ha long-term forest census plot in Barro Colorado Island, Panama. Light reaching each individual tree was estimated from yearly vertical censuses of canopy density. The hierarchical bayesian approach allowed accounting for different sources of error, such as negative growth observations, and including rare species correctly weighted by their abundance. All species grew faster at higher light. Exponents of a power function relating growth to light were mostly between 0 and 1. This indicates that nearly all species exhibit a decelerating increase of growth with light. In contrast, estimated growth rates at standardized conditions (5 cm dbh, 5% light varied over a 9-fold range and reflect strong growth-strategy differentiation between the species. As a consequence, growth rankings of the species at low (2% and high light (20% were highly correlated. Rare species tended to grow faster and showed a greater sensitivity to light than abundant species. Overall, tree size was less important for growth than light and about half the species were predicted to grow faster in diameter when bigger or smaller, respectively. Together light availability and tree diameter only explained on average 12% of the variation in growth rates. Thus, other factors such as soil characteristics, herbivory, or pathogens may contribute considerably to shaping tree growth in the tropics.

  15. Do ectomycorrhizal and arbuscular mycorrhizal temperate tree species systematically differ in root order-related fine root morphology and biomass?

    OpenAIRE

    Kubisch, Petra; Hertel, Dietrich; Leuschner, Christoph

    2015-01-01

    While most temperate broad-leaved tree species form ectomycorrhizal (EM) symbioses, a few species have arbuscular mycorrhizas (AM). It is not known whether EM and AM tree species differ systematically with respect to fine root morphology, fine root system size and root functioning. In a species-rich temperate mixed forest, we studied the fine root morphology and biomass of three EM and three AM tree species from the genera Acer, Carpinus, Fagus, Fraxinus, and Tilia searching for principal dif...

  16. Tree cover and species composition effects on academic performance of primary school students.

    Science.gov (United States)

    Sivarajah, Sivajanani; Smith, Sandy M; Thomas, Sean C

    2018-01-01

    Human exposure to green space and vegetation is widely recognized to result in physical and mental health benefits; however, to date, the specific effects of tree cover, diversity, and species composition on student academic performance have not been investigated. We compiled standardized performance scores in Grades 3 and 6 for the collective student body in 387 schools across the Toronto District School Board (TDSB), and examined variation in relation to tree cover, tree diversity, and tree species composition based on comprehensive inventories of trees on school properties combined with aerial-photo-based assessments of tree cover. Analyses accounted for variation due to socioeconomic factors using the learning opportunity index (LOI), a regional composite index of external challenges to learning that incorporates income and other factors, such as students with English as a second language. As expected, LOI had the greatest influence on student academic performance; however, the proportion of tree cover, as distinct from other types of "green space" such as grass, was found to be a significant positive predictor of student performance, accounting for 13% of the variance explained in a statistical model predicting mean student performance assessments. The effects of tree cover and species composition were most pronounced in schools that showed the highest level of external challenges, suggesting the importance of urban forestry investments in these schools.

  17. FLORISTIC AND SIMILARITY ANALYSIS OF TREE SPECIES IN “MATA DA PRAIA DO TOTÓ’, PELOTAS, RIO GRANDE DO SUL STATE BRAZIL

    Directory of Open Access Journals (Sweden)

    Tiago Schuch Venzke

    2012-12-01

    Full Text Available http://dx.doi.org/10.5902/198050987548The floristic survey of tree species was performed in a ‘Restinga’ forest, municipality of Pelotas, RioGrande do sul State, Brazil. The area studied is known as ‘Mata da Praia do Totó’(‘Totó’ beach forest,and comprises a remnant formed by a sandy and turf ‘Restinga’ forest. A total 65 native species weresampled comprising 51 genera distributed in 34 families. The family with the greatest number of specieswasMyrtaceae, with ten species, followed bySalicaceaeandRubiaceae.The most representative generawereMyrsineandEugenia,respectivelly sampled with four and three species. The analysis of similaritysampled that the sandy forest is floristically related to riparian and hillside forests and the forest peat isrelated to other forests located in areas of permanent water saturation of soil. Species richness of the siteis high for ‘Restinga’ forests in Rio Grande do Sul state, probably due to the influence of forests located inSerra dos Tapes and by diversity of the environments that make up the study area.

  18. Evaluation of seven drought tolerant tree species for central California

    Science.gov (United States)

    E.G. McPherson; S. Albers

    2014-01-01

    Climate change poses challenges for the Southwest, where an already parched region is expected to get hotter and, in its southern half, significantly drier (Garfin et al. 2013). Increased heat and sustained drought will stress water sources and redefine urban landscapes. As landscapes gradually evolve from lush to xeric, tolerance of trees to water-related stress...

  19. Demography of exploited tree species in the Bolivian Amazon

    NARCIS (Netherlands)

    Zuidema, P.A.

    2000-01-01

    Tropical forests are threatened world-wide. Therefore, there is a search for ways to use the forests in a sustainable way, as this could assist in the conservation of these special ecosystems. Non-timber products collected from trees in tropical forests are often mentioned as examples of

  20. Stem biomass and volume models of selected tropical tree species ...

    African Journals Online (AJOL)

    Stem biomass and stem volume were modelled as a function of diameter (at breast height; Dbh) and stem height (height to the crown base). Logarithmic models are presented that utilise Dbh and height data to predict tree component biomass and stem volumes. Alternative models are given that afford prediction based on ...

  1. Modelling dimensional growth of three street tree species in the ...

    African Journals Online (AJOL)

    The results could also be used in the process of modelling energy use reduction, air pollution uptake, rainfall interception, carbon sequestration and microclimate modification of urban forests such as those found in the City of Tshwane. Keywords: allometry; regression; size relationships; tree growth; urban forests. Southern ...

  2. Exemplifying whole-plant ozone uptake in adult forest trees of contrasting species and site conditions

    International Nuclear Information System (INIS)

    Nunn, Angela J.; Wieser, Gerhard; Metzger, Ursula; Loew, Markus; Wipfler, Philip; Haeberle, Karl-Heinz; Matyssek, Rainer

    2007-01-01

    Whole-tree O 3 uptake was exemplified for Picea abies, Fagus sylvatica and Larix decidua in stands at high and low altitude and contrasting water availability through sap flow measurement in tree trunks, intrinsically accounting for drought and boundary layer effects on O 3 flux. O 3 uptake of evergreen spruce per unit foliage area was enhanced by 100% at high relative to low elevation, whereas deciduous beech and larch showed similar uptake regardless of altitude. The responsiveness of the canopy conductance to water vapor and, as a consequence, O 3 uptake to soil moisture and air humidity did not differ between species. Unifying findings at the whole-tree level will promote cause-effect based O 3 risk assessment and modeling. - Sap flow-based assessment of whole-tree O 3 uptake reflects similar responsiveness of canopy conductance and O 3 uptake across contrasting tree species and site conditions

  3. Tree species traits influence soil physical, chemical, and biological properties in high elevation forests.

    Directory of Open Access Journals (Sweden)

    Edward Ayres

    Full Text Available BACKGROUND: Previous studies have shown that plants often have species-specific effects on soil properties. In high elevation forests in the Southern Rocky Mountains, North America, areas that are dominated by a single tree species are often adjacent to areas dominated by another tree species. Here, we assessed soil properties beneath adjacent stands of trembling aspen, lodgepole pine, and Engelmann spruce, which are dominant tree species in this region and are distributed widely in North America. We hypothesized that soil properties would differ among stands dominated by different tree species and expected that aspen stands would have higher soil temperatures due to their open structure, which, combined with higher quality litter, would result in increased soil respiration rates, nitrogen availability, and microbial biomass, and differences in soil faunal community composition. METHODOLOGY/PRINCIPAL FINDINGS: We assessed soil physical, chemical, and biological properties at four sites where stands of aspen, pine, and spruce occurred in close proximity to one-another in the San Juan Mountains, Colorado. Leaf litter quality differed among the tree species, with the highest nitrogen (N concentration and lowest lignin:N in aspen litter. Nitrogen concentration was similar in pine and spruce litter, but lignin:N was highest in pine litter. Soil temperature and moisture were highest in aspen stands, which, in combination with higher litter quality, probably contributed to faster soil respiration rates from stands of aspen. Soil carbon and N content, ammonium concentration, and microbial biomass did not differ among tree species, but nitrate concentration was highest in aspen soil and lowest in spruce soil. In addition, soil fungal, bacterial, and nematode community composition and rotifer, collembolan, and mesostigmatid mite abundance differed among the tree species, while the total abundance of nematodes, tardigrades, oribatid mites, and prostigmatid

  4. The role of exotic tree species in Nordic forestry

    DEFF Research Database (Denmark)

    Kjær, Erik Dahl; Lobo, Albin; Myking, Tor

    2014-01-01

    the vegetation and forest history and its implications for the interest in using exotic species. We review to what extent exotic species can contribute to increased economic returns from forest plantings and the potential negative ecological effects associated with introduction of new species. Considering...... the expected climate changes, we discuss whether and how the increased use of exotic species can contribute to sustained and increased health and productivity of Nordic forests without jeopardising ecological and social values....

  5. Frost hardiness of tree species is independent of phenology and ...

    Indian Academy of Sciences (India)

    The differences in timing in bud burst between species have been interpreted as an adaptation to late frost events in spring. Thus, it has been suggested that the degree of frost susceptibility of leaves is species-specific and depends on the species' phenology and geographic distribution range. To test for relationships ...

  6. How do riparian woody seedlings survive seasonal drought?

    Science.gov (United States)

    Stella, John C; Battles, John J

    2010-11-01

    In semi-arid regions, a major population limitation for riparian trees is seedling desiccation during the dry season that follows annual spring floods. We investigated the stress response of first-year pioneer riparian seedlings to experimental water table declines (0, 1 and 3 cm day(-1)), focusing on the three dominant cottonwood and willows (family Salicaceae) in California's San Joaquin Basin. We analyzed growth and belowground allocation response to water stress, and used logistic regression to determine if these traits had an influence on individual survival. The models indicate that high root growth (>3 mm day(-1)) and low shoot:root ratios (water-use efficiency for surviving water stress. Both S. gooddingii and sandbar willow (S. exigua) reduced leaf size from controls, whereas Fremont cottonwood (Populus fremontii) sustained a 29% reduction in specific leaf area (from 13.4 to 9.6 m(2) kg(-1)). The functional responses exhibited by Goodding's willow, the more drought-tolerant species, may play a role in its greater relative abundance in dry regions such as the San Joaquin Basin. This study highlights the potential for a shift in riparian forest composition. Under a future drier climate regime or under reduced regulated river flows, our results suggest that willow establishment will be favored over cottonwood.

  7. CROWN-LEVEL TREE SPECIES CLASSIFICATION USING INTEGRATED AIRBORNE HYPERSPECTRAL AND LIDAR REMOTE SENSING DATA

    Directory of Open Access Journals (Sweden)

    Z. Wang

    2018-05-01

    Full Text Available Mapping tree species is essential for sustainable planning as well as to improve our understanding of the role of different trees as different ecological service. However, crown-level tree species automatic classification is a challenging task due to the spectral similarity among diversified tree species, fine-scale spatial variation, shadow, and underlying objects within a crown. Advanced remote sensing data such as airborne Light Detection and Ranging (LiDAR and hyperspectral imagery offer a great potential opportunity to derive crown spectral, structure and canopy physiological information at the individual crown scale, which can be useful for mapping tree species. In this paper, an innovative approach was developed for tree species classification at the crown level. The method utilized LiDAR data for individual tree crown delineation and morphological structure extraction, and Compact Airborne Spectrographic Imager (CASI hyperspectral imagery for pure crown-scale spectral extraction. Specifically, four steps were include: 1 A weighted mean filtering method was developed to improve the accuracy of the smoothed Canopy Height Model (CHM derived from LiDAR data; 2 The marker-controlled watershed segmentation algorithm was, therefore, also employed to delineate the tree-level canopy from the CHM image in this study, and then individual tree height and tree crown were calculated according to the delineated crown; 3 Spectral features within 3 × 3 neighborhood regions centered on the treetops detected by the treetop detection algorithm were derived from the spectrally normalized CASI imagery; 4 The shape characteristics related to their crown diameters and heights were established, and different crown-level tree species were classified using the combination of spectral and shape characteristics. Analysis of results suggests that the developed classification strategy in this paper (OA = 85.12 %, Kc = 0.90 performed better than Li

  8. Crown-Level Tree Species Classification Using Integrated Airborne Hyperspectral and LIDAR Remote Sensing Data

    Science.gov (United States)

    Wang, Z.; Wu, J.; Wang, Y.; Kong, X.; Bao, H.; Ni, Y.; Ma, L.; Jin, J.

    2018-05-01

    Mapping tree species is essential for sustainable planning as well as to improve our understanding of the role of different trees as different ecological service. However, crown-level tree species automatic classification is a challenging task due to the spectral similarity among diversified tree species, fine-scale spatial variation, shadow, and underlying objects within a crown. Advanced remote sensing data such as airborne Light Detection and Ranging (LiDAR) and hyperspectral imagery offer a great potential opportunity to derive crown spectral, structure and canopy physiological information at the individual crown scale, which can be useful for mapping tree species. In this paper, an innovative approach was developed for tree species classification at the crown level. The method utilized LiDAR data for individual tree crown delineation and morphological structure extraction, and Compact Airborne Spectrographic Imager (CASI) hyperspectral imagery for pure crown-scale spectral extraction. Specifically, four steps were include: 1) A weighted mean filtering method was developed to improve the accuracy of the smoothed Canopy Height Model (CHM) derived from LiDAR data; 2) The marker-controlled watershed segmentation algorithm was, therefore, also employed to delineate the tree-level canopy from the CHM image in this study, and then individual tree height and tree crown were calculated according to the delineated crown; 3) Spectral features within 3 × 3 neighborhood regions centered on the treetops detected by the treetop detection algorithm were derived from the spectrally normalized CASI imagery; 4) The shape characteristics related to their crown diameters and heights were established, and different crown-level tree species were classified using the combination of spectral and shape characteristics. Analysis of results suggests that the developed classification strategy in this paper (OA = 85.12 %, Kc = 0.90) performed better than LiDAR-metrics method (OA = 79

  9. [Effects of sampling plot number on tree species distribution prediction under climate change].

    Science.gov (United States)

    Liang, Yu; He, Hong-Shi; Wu, Zhi-Wei; Li, Xiao-Na; Luo, Xu

    2013-05-01

    Based on the neutral landscapes under different degrees of landscape fragmentation, this paper studied the effects of sampling plot number on the prediction of tree species distribution at landscape scale under climate change. The tree species distribution was predicted by the coupled modeling approach which linked an ecosystem process model with a forest landscape model, and three contingent scenarios and one reference scenario of sampling plot numbers were assumed. The differences between the three scenarios and the reference scenario under different degrees of landscape fragmentation were tested. The results indicated that the effects of sampling plot number on the prediction of tree species distribution depended on the tree species life history attributes. For the generalist species, the prediction of their distribution at landscape scale needed more plots. Except for the extreme specialist, landscape fragmentation degree also affected the effects of sampling plot number on the prediction. With the increase of simulation period, the effects of sampling plot number on the prediction of tree species distribution at landscape scale could be changed. For generalist species, more plots are needed for the long-term simulation.

  10. Hierarchical Learning of Tree Classifiers for Large-Scale Plant Species Identification.

    Science.gov (United States)

    Fan, Jianping; Zhou, Ning; Peng, Jinye; Gao, Ling

    2015-11-01

    In this paper, a hierarchical multi-task structural learning algorithm is developed to support large-scale plant species identification, where a visual tree is constructed for organizing large numbers of plant species in a coarse-to-fine fashion and determining the inter-related learning tasks automatically. For a given parent node on the visual tree, it contains a set of sibling coarse-grained categories of plant species or sibling fine-grained plant species, and a multi-task structural learning algorithm is developed to train their inter-related classifiers jointly for enhancing their discrimination power. The inter-level relationship constraint, e.g., a plant image must first be assigned to a parent node (high-level non-leaf node) correctly if it can further be assigned to the most relevant child node (low-level non-leaf node or leaf node) on the visual tree, is formally defined and leveraged to learn more discriminative tree classifiers over the visual tree. Our experimental results have demonstrated the effectiveness of our hierarchical multi-task structural learning algorithm on training more discriminative tree classifiers for large-scale plant species identification.

  11. Predicting Potential Changes in Suitable Habitat and Distribution by 2100 for Tree Species of the Eastern United States

    Science.gov (United States)

    Louis R Iverson; Anantha M. Prasad; Mark W. Schwartz; Mark W. Schwartz

    2005-01-01

    We predict current distribution and abundance for tree species present in eastern North America, and subsequently estimate potential suitable habitat for those species under a changed climate with 2 x CO2. We used a series of statistical models (i.e., Regression Tree Analysis (RTA), Multivariate Adaptive Regression Splines (MARS), Bagging Trees (...

  12. [Effects of waterlogging on the growth and energy-metabolic enzyme activities of different tree species].

    Science.gov (United States)

    Wang, Gui-Bin; Cao, Fu-Liang; Zhang, Xiao-Yan; Zhang, Wang-Xiang

    2010-03-01

    Aimed to understand the waterlogging tolerance and adaptation mechanisms of different tree species, a simulated field experiment was conducted to study the growth and energy-metabolic enzyme activities of one-year-old seedlings of Taxodium distichum, Carya illinoensis, and Sapium sebiferum. Three treatments were installed, i. e., CK, waterlogging, and flooding, with the treatment duration being 60 days. Under waterlogging and flooding, the relative growth of test tree species was in the order of T. distichum > C. illinoensis > S. sebiferum, indicating that T. distichum had the strongest tolerance against waterlogging and flooding, while S. sebiferum had the weakest one. Also under waterlogging and flooding, the root/crown ratio of the three tree species increased significantly, suggesting that more photosynthates were allocated in roots, and the lactate dehydrogenase (LDH) and alcohol dehydrogenase (ADH) activities of the tree species also had a significant increase. Among the test tree species, T. distichum had the lowest increment of LDH and ADH activities under waterlogging and flooding, but the increment could maintain at a higher level in the treatment duration, while for C. illinoensis and S. sebiferum, the increment was larger during the initial and medium period, but declined rapidly during the later period of treatment. The malate dehydrogenase (MDH), phosphohexose (HPI), and glucose-6-phosphate dehydrogenase (G6PDH) -6-phosphogluconate dehydrogenase (6PGDH) activities of the tree species under waterlogging and flooding had a significant decrease, and the decrement was the largest for T. distichum, being 35.6% for MDH, 21.0% for HPI, and 22.7% for G6PDH - 6PGDH under flooding. It was suggested that under waterlogging and flooding, the tree species with strong waterlogging tolerance had a higher ability to maintain energy-metabolic balance, and thus, its growth could be maintained at a certain level.

  13. Evolutionary patterns of range size, abundance and species richness in Amazonian angiosperm trees

    Directory of Open Access Journals (Sweden)

    Kyle Dexter

    2016-09-01

    Full Text Available Amazonian tree species vary enormously in their total abundance and range size, while Amazonian tree genera vary greatly in species richness. The drivers of this variation are not well understood. Here, we construct a phylogenetic hypothesis that represents half of Amazonian tree genera in order to contribute to explaining the variation. We find several clear, broad-scale patterns. Firstly, there is significant phylogenetic signal for all three characteristics; closely related genera tend to have similar numbers of species and similar mean range size and abundance. Additionally, the species richness of genera shows a significant, negative relationship with the mean range size and abundance of their constituent species. Our results suggest that phylogenetically correlated intrinsic factors, namely traits of the genera themselves, shape among lineage variation in range size, abundance and species richness. We postulate that tree stature may be one particularly relevant trait. However, other traits may also be relevant, and our study reinforces the need for ambitious compilations of trait data for Amazonian trees. In the meantime, our study shows how large-scale phylogenies can help to elucidate, and contribute to explaining, macroecological and macroevolutionary patterns in hyperdiverse, yet poorly understood regions like the Amazon Basin.

  14. Ambrosia Beetle (Coleoptera: Scolytidae) Species, Flight, and Attack on Living Eastern Cottonwood Trees.

    Energy Technology Data Exchange (ETDEWEB)

    Coyle, D R; D.C. Booth: M.S. Wallace

    2005-12-01

    ABSTRACT In spring 2002, ambrosia beetles (Coleoptera: Scolytidae) infested an intensively managed 22-ha tree plantation on the upper coastal plain of South Carolina. Nearly 3,500 scolytids representing 28 species were captured in ethanol-baited traps from 18 June 2002 to 18 April 2004. More than 88% of total captures were exotic species. Five species [Dryoxylon onoharaensum (Murayama), Euwallacea validus (Eichhoff), Pseudopityophthorus minutissimus (Zimmermann), Xyleborus atratus Eichhoff, and Xyleborus impressus Eichhoff]) were collected in South Carolina for the first time. Of four tree species in the plantation, eastern cottonwood, Populus deltoides Bartram, was the only one attacked, with nearly 40% of the trees sustaining ambrosia beetle damage. Clone ST66 sustained more damage than clone S7C15. ST66 trees receiving fertilization were attacked more frequently than trees receiving irrigation, irrigation_fertilization, or controls, although the number of S7C15 trees attacked did not differ among treatments. The study location is near major shipping ports; our results demonstrate the necessity for intensive monitoring programs to determine the arrival, spread, ecology, and impact of exotic scolytids.

  15. A novel approach to internal crown characterization for coniferous tree species classification

    Science.gov (United States)

    Harikumar, A.; Bovolo, F.; Bruzzone, L.

    2016-10-01

    The knowledge about individual trees in forest is highly beneficial in forest management. High density small foot- print multi-return airborne Light Detection and Ranging (LiDAR) data can provide a very accurate information about the structural properties of individual trees in forests. Every tree species has a unique set of crown structural characteristics that can be used for tree species classification. In this paper, we use both the internal and external crown structural information of a conifer tree crown, derived from a high density small foot-print multi-return LiDAR data acquisition for species classification. Considering the fact that branches are the major building blocks of a conifer tree crown, we obtain the internal crown structural information using a branch level analysis. The structure of each conifer branch is represented using clusters in the LiDAR point cloud. We propose the joint use of the k-means clustering and geometric shape fitting, on the LiDAR data projected onto a novel 3-dimensional space, to identify branch clusters. After mapping the identified clusters back to the original space, six internal geometric features are estimated using a branch-level analysis. The external crown characteristics are modeled by using six least correlated features based on cone fitting and convex hull. Species classification is performed using a sparse Support Vector Machines (sparse SVM) classifier.

  16. Trees of Laos and Vietnam: a field guide to 100 economically or ecologically important species

    NARCIS (Netherlands)

    Sam, Hoang Van; Nanthavong, Khamseng; Keßler, P.J.A.

    2004-01-01

    This field guide to 100 economically or ecologically important tree species from Laos and Vietnam enables the user to identify the included taxa with user-friendly keys. It includes scientific names, botanical descriptions of families, genera, and species. Specific information on distribution,

  17. Climate-related genetic variation in a threatened tree species, Pinus albicaulis

    Science.gov (United States)

    Marcus V. Warwell; Ruth G. Shaw

    2017-01-01

    PREMISE OF THE STUDY: With ongoing climate change, understanding of intraspecific adaptive variation is critical for conservation and restoration of plant species. Such information is especially scarce for threatened and endangered tree species, such as Pinus albicaulis Engelm. Therefore, our principal aims were to assess adaptive variation and characterize its...

  18. Distribution and dispersal of Xylaria endophytes in two tree species in Puerto Rico

    Science.gov (United States)

    P. Bayman; D. J. Lodge; P. Angulo-Sandoval; Z. Baez-Ortiz

    1998-01-01

    Xylaria species are common endophytes in tropical plants. It is not known, however, whether transmission of Xylaria occurs horizontally or vertically, whether individual Xylaria strains have wide host ranges or are host-specific, or how they are dispersed. We compared frequency of Xylaria endophytes in leaves and seeds of two tree species in Puerto Rico, Casuarina...

  19. Equations relating compacted and uncompacted live crown ratio for common tree species in the South

    Science.gov (United States)

    KaDonna C. Randolph

    2010-01-01

    Species-specific equations to predict uncompacted crown ratio (UNCR) from compacted live crown ratio (CCR), tree length, and stem diameter were developed for 24 species and 12 genera in the southern United States. Using data from the US Forest Service Forest Inventory and Analysis program, nonlinear regression was used to model UNCR with a logistic function. Model...

  20. Trees of Laos and Vietnam: a field guide to 100 economically or ecologically important species

    OpenAIRE

    Sam, Hoang Van; Nanthavong, Khamseng; Keßler, P.J.A.

    2004-01-01

    This field guide to 100 economically or ecologically important tree species from Laos and Vietnam enables the user to identify the included taxa with user-friendly keys. It includes scientific names, botanical descriptions of families, genera, and species. Specific information on distribution, habitat, ecology, and uses has been compiled. All specimens examined have been listed.

  1. Factors influencing non-native tree species distribution in urban landscapes

    Science.gov (United States)

    Wayne C. Zipperer

    2010-01-01

    Non-native species are presumed to be pervasive across the urban landscape. Yet, we actually know very little about their actual distribution. For this study, vegetation plot data from Syracuse, NY and Baltimore, MD were used to examine non-native tree species distribution in urban landscapes. Data were collected from remnant and emergent forest patches on upland sites...

  2. Barriopsis iraniana and Phaeobotryon cupressi: two new species of the Botryosphaeriaceae from trees in Iran

    NARCIS (Netherlands)

    Abdollahzadeh, J.; Mohammadi Goltapeh, E.; Javadi, A.; Shams-bakhsh, M.; Zare, R.; Phillips:, A.J.L.

    2009-01-01

    Species in the Botryosphaeriaceae are well known as pathogens and saprobes of woody hosts, but little is known about the species that occur in Iran. In a recent survey of this family in Iran two fungi with diplodia-like anamorphs were isolated from various tree hosts. These two fungi were fully

  3. Geography, topography, and history affect realized-to-potential tree species richness patterns in Europe

    DEFF Research Database (Denmark)

    Svenning, J.-C.; Fitzpatrick, Matthew C.; Normand, Signe

    2010-01-01

    by assembly from regional species pools. Using the European tree flora as our study system, we implemented a novel approach to assess the relative importance of local and regional mechanisms that control local species richness. We first identified species pools that tolerate particular local environments....../P richness ratio estimates, but we found consistent support for a negative effect of regional geographic fragmentation and a positive topographic effect. We also identified fairly broad support for the predicted effect of accessibility. We conclude that local tree assemblages in Europe often fail to realize...

  4. Spectral reflectance of five hardwood tree species in southern Indiana

    Science.gov (United States)

    Dale R. Weigel; J.C. Randolph

    2013-01-01

    The use of remote sensing to identify forest species has been ongoing since the launch of Landsat-1 using MSS imagery. The ability to separate hardwoods from conifers was accomplished by the 1980s. However, distinguishing individual hardwood species is more problematic due to similar spectral and phenological characteristics. With the launch of commercial satellites...

  5. Spatial distribution and interspecific associations of tree species in a tropical seasonal rain forest of China.

    Directory of Open Access Journals (Sweden)

    Guoyu Lan

    Full Text Available Studying the spatial pattern and interspecific associations of plant species may provide valuable insights into processes and mechanisms that maintain species coexistence. Point pattern analysis was used to analyze the spatial distribution patterns of twenty dominant tree species, their interspecific spatial associations and changes across life stages in a 20-ha permanent plot of seasonal tropical rainforest in Xishuangbanna, China, to test mechanisms maintaining species coexistence. Torus-translation tests were used to quantify positive or negative associations of the species to topographic habitats. The results showed: (1 fourteen of the twenty tree species were negatively (or positively associated with one or two of the topographic variables, which evidences that the niche contributes to the spatial pattern of these species. (2 Most saplings of the study species showed a significantly clumped distribution at small scales (0-10 m which was lost at larger scales (10-30 m. (3 The degree of spatial clumping deceases from saplings, to poles, to adults indicates that density-dependent mortality of the offspring is ubiquitous in species. (4 It is notable that a high number of positive small-scale interactions were found among the twenty species. For saplings, 42.6% of all combinations of species pairs showed positive associations at neighborhood scales up to five meters, but only 38.4% were negative. For poles and adults, positive associations at these distances still made up 45.5% and 29.5%, respectively. In conclusion, there is considerable evidence for the presence of positive interactions among the tree species, which suggests that species herd protection may occur in our plot. In addition, niche assembly and limited dispersal (likely contribute to the spatial patterns of tree species in the tropical seasonal rain forest in Xishuangbanna, China.

  6. Soil carbon accumulation and nitrogen retention traits of four tree species grown in common gardens

    DEFF Research Database (Denmark)

    Gurmesa, Geshere Abdisa; Schmidt, Inger Kappel; Gundersen, Per

    2013-01-01

    explored. Effects of four tree species on soil C and N stocks and soil water nitrate concentration below the root zone were evaluated in a common garden design replicated at eight sites in Denmark. The tree species were beech (Fagus sylvatica L.), oak (Quercus robur L.), larch (Larix leptolepis Kaempf......), and Norway spruce (Picea abies (L) Karst.). After four decades, there were significant differences in forest floor C stocks among all four species, and C stocks increased consistently in the order oak Forest floor N stocks only...... differed significantly between conifers and broadleaves. The observed differences in forest floor C and N stocks were attributed to differences in litter turnover rates among the tree species. Mineral soil C stocks were significantly higher in stands of Norway spruce than in stands of oak and beech while...

  7. Temporal variation in the arthropod community of desert riparian habitats with varying amounts of saltcedar (Tamarix ramosissima)

    Science.gov (United States)

    Durst, S.L.; Theimer, T.C.; Paxton, E.H.; Sogge, M.K.

    2008-01-01

    We used Malaise traps to examine the aerial arthropod community in riparian habitats dominated by native willow, exotic saltcedar, or a mixture of these two tree species in central Arizona, USA. Over the course of three sampling periods per year in 2003 and 2004, native habitats had significantly greater diversity (Shannon-Wiener) and supported different arthropod communities compared to exotic habitats, while mixed habitats were intermediate in terms of diversity and supported an arthropod community statistically indistinguishable from the exotic site. The composition of arthropod communities varied significantly between the two years, and there was an approximately two-fold difference in richness and diversity. Overall, we documented complex interactions indicating that differences among the arthropod communities of riparian habitats may be driven not only by the composition of native and exotic tree species making up these habitats, but also by year and season of arthropod sampling.

  8. Early establishment of trees at the alpine treeline: idiosyncratic species responses to temperature-moisture interactions.

    Science.gov (United States)

    Loranger, Hannah; Zotz, Gerhard; Bader, Maaike Y

    2016-01-01

    On a global scale, temperature is the main determinant of arctic and alpine treeline position. However on a local scale, treeline form and position vary considerably due to other climatic factors, tree species ecology and life-stage-dependent responses. For treelines to advance poleward or uphill, the first steps are germination and seedling establishment. These earliest life stages may be major bottlenecks for treeline tree populations and will depend differently on climatic conditions than adult trees. We investigated the effect of soil temperature and moisture on germination and early seedling survival in a field experiment in the French Alps near the local treeline (2100 m a.s.l.) using passive temperature manipulations and two watering regimes. Five European treeline tree species were studied: Larix decidua, Picea abies, Pinus cembra, Pinus uncinata and Sorbus aucuparia In addition, we monitored the germination response of three of these species to low temperatures under controlled conditions in growth chambers. The early establishment of these trees at the alpine treeline was limited either by temperature or by moisture, the sensitivity to one factor often depending on the intensity of the other. The results showed that the relative importance of the two factors and the direction of the effects are highly species-specific, while both factors tend to have consistent effects on both germination and early seedling survival within each species. We show that temperature and water availability are both important contributors to establishment patterns of treeline trees and hence to species-specific forms and positions of alpine treelines. The observed idiosyncratic species responses highlight the need for studies including several species and life-stages to create predictive power concerning future treeline dynamics. © The Authors 2016. Published by Oxford University Press on behalf of the Annals of Botany Company.

  9. Rhizosphere soil microbial index of tree species in a coal mining ecosystem

    Energy Technology Data Exchange (ETDEWEB)

    Sinha, S.; Masto, R.E.; Ram, L.C.; Selvi, V.A.; Srivastava, N.K.; Tripathi, R.C.; George, J. [Central Institute of Mining & Fuel Research, Dhanbad (India)

    2009-09-15

    Microbial characterization of the tree rhizosphere provides important information relating to the screening of tree species for re-vegetation of degraded land. Rhizosphere soil samples collected from a few predominant tree species growing in the coal mining ecosystem of Dhanbad, India, were analyzed for soil organic carbon (SOC), mineralizable N, microbial biomass carbon (MBC), active microbial biomass carbon (AMBC), basal soil respiration (BSR), and soil enzyme activities (dehydrogenase, urease, catalase, phenol oxidase, and peroxidase). Principal component analysis was employed to derive a rhizosphere soil microbial index (RSMI) and accordingly, dehydrogenase, BSR/MBC, MBC/SOC, EC, phenol oxidase and AMBC were found to be the most critical properties. The observed values for the above properties were converted into a unitless score (0-1.00) and the scores were integrated into RSMI. The tree species could be arranged in decreasing order of the RSMI as: A. marmelos (0.718), A. indica (0.715), Bauhinia bauhinia (0.693), B. monosperma (0.611), E. jambolana (0.601), Moringa oleifera (0.565), Dalbergia sissoo (0.498), T indica (0.488), Morus alba (0.415), F religiosa (0.291), Eucalyptus sp. (0.232) and T grandis (0.181). It was concluded that tree species in coal mining areas had diverse effects on their respective rhizosphere microbial processes, which could directly or indirectly determine the survival and performance of the planted tree species in degraded coal mining areas. Tree species with higher RSMI values could be recommended for re-vegetation of degraded coal mining area.

  10. Selective logging in tropical forests decreases the robustness of liana-tree interaction networks to the loss of host tree species.

    Science.gov (United States)

    Magrach, Ainhoa; Senior, Rebecca A; Rogers, Andrew; Nurdin, Deddy; Benedick, Suzan; Laurance, William F; Santamaria, Luis; Edwards, David P

    2016-03-16

    Selective logging is one of the major drivers of tropical forest degradation, causing important shifts in species composition. Whether such changes modify interactions between species and the networks in which they are embedded remain fundamental questions to assess the 'health' and ecosystem functionality of logged forests. We focus on interactions between lianas and their tree hosts within primary and selectively logged forests in the biodiversity hotspot of Malaysian Borneo. We found that lianas were more abundant, had higher species richness, and different species compositions in logged than in primary forests. Logged forests showed heavier liana loads disparately affecting slow-growing tree species, which could exacerbate the loss of timber value and carbon storage already associated with logging. Moreover, simulation scenarios of host tree local species loss indicated that logging might decrease the robustness of liana-tree interaction networks if heavily infested trees (i.e. the most connected ones) were more likely to disappear. This effect is partially mitigated in the short term by the colonization of host trees by a greater diversity of liana species within logged forests, yet this might not compensate for the loss of preferred tree hosts in the long term. As a consequence, species interaction networks may show a lagged response to disturbance, which may trigger sudden collapses in species richness and ecosystem function in response to additional disturbances, representing a new type of 'extinction debt'. © 2016 The Author(s).

  11. Selective logging in tropical forests decreases the robustness of liana–tree interaction networks to the loss of host tree species

    Science.gov (United States)

    Magrach, Ainhoa; Senior, Rebecca A.; Rogers, Andrew; Nurdin, Deddy; Benedick, Suzan; Laurance, William F.; Santamaria, Luis; Edwards, David P.

    2016-01-01

    Selective logging is one of the major drivers of tropical forest degradation, causing important shifts in species composition. Whether such changes modify interactions between species and the networks in which they are embedded remain fundamental questions to assess the ‘health’ and ecosystem functionality of logged forests. We focus on interactions between lianas and their tree hosts within primary and selectively logged forests in the biodiversity hotspot of Malaysian Borneo. We found that lianas were more abundant, had higher species richness, and different species compositions in logged than in primary forests. Logged forests showed heavier liana loads disparately affecting slow-growing tree species, which could exacerbate the loss of timber value and carbon storage already associated with logging. Moreover, simulation scenarios of host tree local species loss indicated that logging might decrease the robustness of liana–tree interaction networks if heavily infested trees (i.e. the most connected ones) were more likely to disappear. This effect is partially mitigated in the short term by the colonization of host trees by a greater diversity of liana species within logged forests, yet this might not compensate for the loss of preferred tree hosts in the long term. As a consequence, species interaction networks may show a lagged response to disturbance, which may trigger sudden collapses in species richness and ecosystem function in response to additional disturbances, representing a new type of ‘extinction debt’. PMID:26936241

  12. Survival and development of Lymantria monacha (Lepidoptera: Lymantriidae) on North American and introduced Eurasian tree species.

    Science.gov (United States)

    Keena, M A

    2003-02-01

    Lymantria monacha (L.) (Lepidoptera: Lymantriidae), the nun moth, is a Eurasian pest of conifers that has potential for accidental introduction into North America. To project the potential host range of this insect if introduced into North America, survival and development of L. monacha on 26 North American and eight introduced Eurasian tree species were examined. Seven conifer species (Abies concolor, Picea abies, P. glauca, P. pungens, Pinus sylvestris with male cones, P. menziesii variety glance, and Tsuga canadensis) and six broadleaf species (Betula populifolia, Malus x domestica, Prunus serotiaa, Quercus lobata, Q. rubra, and Q. velutina) were suitable for L. monacha survival and development. Eleven of the host species tested were rated as intermediate in suitability, four conifer species (Larix occidentalis, P. nigra, P. ponderosa, P. strobus, and Pseudotsuga menziesii variety menziesii) and six broadleaf species (Carpinus caroliniana, Carya ovata, Fagus grandifolia, Populus grandidentata, Q. alba, and Tilia cordata) and the remaining 10 species tested were rated as poor (Acer rubrum, A. platanoidies, A. saccharum, F. americana, Juniperus virginiana, Larix kaempferi, Liriodendron tulipfera, Morus alba, P. taeda, and P. deltoides). The phenological state of the trees had a major impact on establishment, survival, and development of L. monacha on many of the tree species tested. Several of the deciduous tree species that are suitable for L. monacha also are suitable for L. dispar (L.) and L. mathura Moore. Establishment of L. monacha in North America would be catastrophic because of the large number of economically important tree species on which it can survive and develop, and the ability of mated females to fly and colonize new areas.

  13. [Mahalanobis distance based hyperspectral characteristic discrimination of leaves of different desert tree species].

    Science.gov (United States)

    Lin, Hai-jun; Zhang, Hui-fang; Gao, Ya-qi; Li, Xia; Yang, Fan; Zhou, Yan-fei

    2014-12-01

    The hyperspectral reflectance of Populus euphratica, Tamarix hispida, Haloxylon ammodendron and Calligonum mongolicum in the lower reaches of Tarim River and Turpan Desert Botanical Garden was measured by using the HR-768 field-portable spectroradiometer. The method of continuum removal, first derivative reflectance and second derivative reflectance were used to deal with the original spectral data of four tree species. The method of Mahalanobis Distance was used to select the bands with significant differences in the original spectral data and transform spectral data to identify the different tree species. The progressive discrimination analyses were used to test the selective bands used to identify different tree species. The results showed that The Mahalanobis Distance method was an effective method in feature band extraction. The bands for identifying different tree species were most near-infrared bands. The recognition accuracy of four methods was 85%, 93.8%, 92.4% and 95.5% respectively. Spectrum transform could improve the recognition accuracy. The recognition accuracy of different research objects and different spectrum transform methods were different. The research provided evidence for desert tree species classification, monitoring biodiversity and the analysis of area in desert by using large scale remote sensing method.

  14. Inferring duplications, losses, transfers and incomplete lineage sorting with nonbinary species trees.

    Science.gov (United States)

    Stolzer, Maureen; Lai, Han; Xu, Minli; Sathaye, Deepa; Vernot, Benjamin; Durand, Dannie

    2012-09-15

    Gene duplication (D), transfer (T), loss (L) and incomplete lineage sorting (I) are crucial to the evolution of gene families and the emergence of novel functions. The history of these events can be inferred via comparison of gene and species trees, a process called reconciliation, yet current reconciliation algorithms model only a subset of these evolutionary processes. We present an algorithm to reconcile a binary gene tree with a nonbinary species tree under a DTLI parsimony criterion. This is the first reconciliation algorithm to capture all four evolutionary processes driving tree incongruence and the first to reconcile non-binary species trees with a transfer model. Our algorithm infers all optimal solutions and reports complete, temporally feasible event histories, giving the gene and species lineages in which each event occurred. It is fixed-parameter tractable, with polytime complexity when the maximum species outdegree is fixed. Application of our algorithms to prokaryotic and eukaryotic data show that use of an incomplete event model has substantial impact on the events inferred and resulting biological conclusions. Our algorithms have been implemented in Notung, a freely available phylogenetic reconciliation software package, available at http://www.cs.cmu.edu/~durand/Notung. mstolzer@andrew.cmu.edu.

  15. TimeTree2: species divergence times on the iPhone.

    Science.gov (United States)

    Kumar, Sudhir; Hedges, S Blair

    2011-07-15

    Scientists, educators and the general public often need to know times of divergence between species. But they rarely can locate that information because it is buried in the scientific literature, usually in a format that is inaccessible to text search engines. We have developed a public knowledgebase that enables data-driven access to the collection of peer-reviewed publications in molecular evolution and phylogenetics that have reported estimates of time of divergence between species. Users can query the TimeTree resource by providing two names of organisms (common or scientific) that can correspond to species or groups of species. The current TimeTree web resource (TimeTree2) contains timetrees reported from molecular clock analyses in 910 published studies and 17 341 species that span the diversity of life. TimeTree2 interprets complex and hierarchical data from these studies for each user query, which can be launched using an iPhone application, in addition to the website. Published time estimates are now readily accessible to the scientific community, K-12 and college educators, and the general public, without requiring knowledge of evolutionary nomenclature. TimeTree2 is accessible from the URL http://www.timetree.org, with an iPhone app available from iTunes (http://itunes.apple.com/us/app/timetree/id372842500?mt=8) and a YouTube tutorial (http://www.youtube.com/watch?v=CxmshZQciwo).

  16. Sampling procedures for inventory of commercial volume tree species in Amazon Forest.

    Science.gov (United States)

    Netto, Sylvio P; Pelissari, Allan L; Cysneiros, Vinicius C; Bonazza, Marcelo; Sanquetta, Carlos R

    2017-01-01

    The spatial distribution of tropical tree species can affect the consistency of the estimators in commercial forest inventories, therefore, appropriate sampling procedures are required to survey species with different spatial patterns in the Amazon Forest. For this, the present study aims to evaluate the conventional sampling procedures and introduce the adaptive cluster sampling for volumetric inventories of Amazonian tree species, considering the hypotheses that the density, the spatial distribution and the zero-plots affect the consistency of the estimators, and that the adaptive cluster sampling allows to obtain more accurate volumetric estimation. We use data from a census carried out in Jamari National Forest, Brazil, where trees with diameters equal to or higher than 40 cm were measured in 1,355 plots. Species with different spatial patterns were selected and sampled with simple random sampling, systematic sampling, linear cluster sampling and adaptive cluster sampling, whereby the accuracy of the volumetric estimation and presence of zero-plots were evaluated. The sampling procedures applied to species were affected by the low density of trees and the large number of zero-plots, wherein the adaptive clusters allowed concentrating the sampling effort in plots with trees and, thus, agglutinating more representative samples to estimate the commercial volume.

  17. How much does climate change threaten European forest tree species distributions?

    Science.gov (United States)

    Dyderski, Marcin K; Paź, Sonia; Frelich, Lee E; Jagodziński, Andrzej M

    2018-03-01

    Although numerous species distribution models have been developed, most were based on insufficient distribution data or used older climate change scenarios. We aimed to quantify changes in projected ranges and threat level by the years 2061-2080, for 12 European forest tree species under three climate change scenarios. We combined tree distribution data from the Global Biodiversity Information Facility, EUFORGEN, and forest inventories, and we developed species distribution models using MaxEnt and 19 bioclimatic variables. Models were developed for three climate change scenarios-optimistic (RCP2.6), moderate (RCP4.5), and pessimistic (RPC8.5)-using three General Circulation Models, for the period 2061-2080. Our study revealed different responses of tree species to projected climate change. The species may be divided into three groups: "winners"-mostly late-successional species: Abies alba, Fagus sylvatica, Fraxinus excelsior, Quercus robur, and Quercus petraea; "losers"-mostly pioneer species: Betula pendula, Larix decidua, Picea abies, and Pinus sylvestris; and alien species-Pseudotsuga menziesii, Quercus rubra, and Robinia pseudoacacia, which may be also considered as "winners." Assuming limited migration, most of the species studied would face a significant decrease in suitable habitat area. The threat level was highest for species that currently have the northernmost distribution centers. Ecological consequences of the projected range contractions would be serious for both forest management and nature conservation. © 2017 John Wiley & Sons Ltd.

  18. BOREAS TE-04 Gas Exchange Data from Boreal Tree Species

    Data.gov (United States)

    National Aeronautics and Space Administration — Contains TE-04 data on gas exchange studies of photosynthesis, respiration and stomatal conductance of boreal forest species using the MPH-1000 system.

  19. BOREAS TE-04 Branch Bag Data from Boreal Tree Species

    Data.gov (United States)

    National Aeronautics and Space Administration — ABSTRACT: Contains 1996 TE-04 data of branch bag studies of photosynthesis, respiration and stomatal conductance of boreal forest species using the open MPH-1000...

  20. Leaf anatomical traits of non-arboreal savanna species along a gradient of tree encroachment

    Directory of Open Access Journals (Sweden)

    Luiz Felipe Souza Pinheiro

    2017-10-01

    Full Text Available ABSTRACT In the Brazilian savanna (Cerrado of Brazil, fire suppression has transformed typical savanna formations (TS into forested savanna (FS due to the phenomenon of encroachment. Under encroachment, non-arboreal plants begin to receive less light due to greater tree density and canopy closure. Here we aim to evaluate if leaf anatomical traits of non-arboreal species differ according to the degree of tree encroachment at the Assis Ecological Station - São Paulo, Brazil. To this end, we evaluated leaf tissue thickness and specific leaf area (SLA in representative non-arboreal species occurring along a gradient of tree encroachment. Leaves of TS species showed a trend towards xeromorphism, with traits reported to facilitate survival under high luminosity, such as thick leaves, thick epidermis and mesophyll, and low SLA. In contrast, FS species exhibited mesomorphic leaves, with thin mesophyll and high SLA, which are able to capture diffuse light in denser environments. Thus, non-arboreal understory species with mesomorphic leaf traits should be favored in environments with denser vegetation in contrast to typical savanna species. The results suggest that typical non-arboreal savanna species would not survive under tree encroachment due to the low competitiveness of their leaf anatomical strategies in shady environments.

  1. Density, size and distribution of stomata in 35 rainforest trees species in Central Amazonia

    OpenAIRE

    Miguel Angelo Branco Camargo; Ricardo Antonio Marenco

    2011-01-01

    Stomata are turgor-operated valves that control water loss and CO2 uptake during photosynthesis, and thereby water relation and plant biomass accumulation is closely related to stomatal functioning. The aims of this work were to document how stomata are distributed on the leaf surface and to determine if there is any significant variation in stomatal characteristics among Amazonian tree species, and finally to study the relationship between stomatal density (S D) and tree height. Thirty five ...

  2. Density, size and distribution of stomata in 35 rainforest tree species in Central Amazonia

    OpenAIRE

    Camargo, Miguel Angelo Branco; Marenco, Ricardo Antonio

    2011-01-01

    Stomata are turgor-operated valves that control water loss and CO2 uptake during photosynthesis, and thereby water relation and plant biomass accumulation is closely related to stomatal functioning. The aims of this work were to document how stomata are distributed on the leaf surface and to determine if there is any significant variation in stomatal characteristics among Amazonian tree species, and finally to study the relationship between stomatal density (S D) and tree height. Thirty five ...

  3. Some aspects of the Seed Germination and Seedling Growth of two Savanna tree Species

    OpenAIRE

    D.A. Agboola; A.A. Ajiboye; O.O. Fawibe; M.O. Atayese

    2014-01-01

    Studies were made on some aspects of the seed germination and seedling growth of two multipurpose trees. These include the effect of pre sowing treatments, seed sizes and gibberellic acid on the germination of seeds and seedling growth. The tree species include Prosopis africana (Guil & Perr) Taub and Dialium guineense (wild). Two seed sizes designated small- size (Ss) and Big-size (Bs) were identified in the seed. The effect of gibberellic acid (GA3) had a greater significance effect (P < 0....

  4. Phylogenetic Structure of Tree Species across Different Life Stages from Seedlings to Canopy Trees in a Subtropical Evergreen Broad-Leaved Forest.

    Science.gov (United States)

    Jin, Yi; Qian, Hong; Yu, Mingjian

    2015-01-01

    Investigating patterns of phylogenetic structure across different life stages of tree species in forests is crucial to understanding forest community assembly, and investigating forest gap influence on the phylogenetic structure of forest regeneration is necessary for understanding forest community assembly. Here, we examine the phylogenetic structure of tree species across life stages from seedlings to canopy trees, as well as forest gap influence on the phylogenetic structure of forest regeneration in a forest of the subtropical region in China. We investigate changes in phylogenetic relatedness (measured as NRI) of tree species from seedlings, saplings, treelets to canopy trees; we compare the phylogenetic turnover (measured as βNRI) between canopy trees and seedlings in forest understory with that between canopy trees and seedlings in forest gaps. We found that phylogenetic relatedness generally increases from seedlings through saplings and treelets up to canopy trees, and that phylogenetic relatedness does not differ between seedlings in forest understory and those in forest gaps, but phylogenetic turnover between canopy trees and seedlings in forest understory is lower than that between canopy trees and seedlings in forest gaps. We conclude that tree species tend to be more closely related from seedling to canopy layers, and that forest gaps alter the seedling phylogenetic turnover of the studied forest. It is likely that the increasing trend of phylogenetic clustering as tree stem size increases observed in this subtropical forest is primarily driven by abiotic filtering processes, which select a set of closely related evergreen broad-leaved tree species whose regeneration has adapted to the closed canopy environments of the subtropical forest developed under the regional monsoon climate.

  5. Can tree species diversity be assessed with Landsat data in a temperate forest?

    Science.gov (United States)

    Arekhi, Maliheh; Yılmaz, Osman Yalçın; Yılmaz, Hatice; Akyüz, Yaşar Feyza

    2017-10-28

    The diversity of forest trees as an indicator of ecosystem health can be assessed using the spectral characteristics of plant communities through remote sensing data. The objectives of this study were to investigate alpha and beta tree diversity using Landsat data for six dates in the Gönen dam watershed of Turkey. We used richness and the Shannon and Simpson diversity indices to calculate tree alpha diversity. We also represented the relationship between beta diversity and remotely sensed data using species composition similarity and spectral distance similarity of sampling plots via quantile regression. A total of 99 sampling units, each 20 m × 20 m, were selected using geographically stratified random sampling method. Within each plot, the tree species were identified, and all of the trees with a diameter at breast height (dbh) larger than 7 cm were measured. Presence/absence and abundance data (tree species number and tree species basal area) of tree species were used to determine the relationship between richness and the Shannon and Simpson diversity indices, which were computed with ground field data, and spectral variables derived (2 × 2 pixels and 3 × 3 pixels) from Landsat 8 OLI data. The Shannon-Weiner index had the highest correlation. For all six dates, NDVI (normalized difference vegetation index) was the spectral variable most strongly correlated with the Shannon index and the tree diversity variables. The Ratio of green to red (VI) was the spectral variable least correlated with the tree diversity variables and the Shannon basal area. In both beta diversity curves, the slope of the OLS regression was low, while in the upper quantile, it was approximately twice the lower quantiles. The Jaccard index is closed to one with little difference in both two beta diversity approaches. This result is due to increasing the similarity between the sampling plots when they are located close to each other. The intercept differences between two

  6. Phytoextraction of potentially toxic elements by six tree species growing on hazardous mining sludge.

    Science.gov (United States)

    Mleczek, Mirosław; Goliński, Piotr; Krzesłowska, Magdalena; Gąsecka, Monika; Magdziak, Zuzanna; Rutkowski, Paweł; Budzyńska, Sylwia; Waliszewska, Bogusława; Kozubik, Tomisław; Karolewski, Zbigniew; Niedzielski, Przemysław

    2017-10-01

    The aim of the study was to compare the phytoextraction abilities of six tree species (Acer platanoides L., Acer pseudoplatanus L., Betula pendula Roth, Quercus robur L., Tilia cordata Miller, Ulmus laevis Pall.), cultivated on mining sludge contaminated with arsenic (As), cadmium (Cd), copper (Cu), lead (Pb), thallium (Tl), and zinc (Zn). All six tree species were able to survive on such an unpromising substrate. However, A. platanoides and T. cordata seedlings grown on the polluted substrate showed significantly lower biomass than control plants (55.5 and 45.6%, respectively). As, Cd, Cu, Pb, and Tl predominantly accumulated in the roots of all the analyzed tree species with the following highest contents: 1616, 268, 2432, 547, and 856 mg kg -1 , respectively. Zn was predominantly localized in shoots with the highest content of 5801 and 5732 mg kg -1 for U. laevis and A. platanoides, respectively. A. platanoides was the most effective in Zn phytoextaction, with a bioconcentration factor (BCF) of 8.99 and a translocation factor (TF) of 1.5. Furthermore, with the exception of A. pseudoplatanus, the analyzed tree species showed a BCF > 1 for Tl, with the highest value for A. platanoides (1.41). However, the TF for this metal was lower than 1 in all the analyzed tree species. A. platanoides showed the highest BCF and a low TF and could, therefore, be a promising species for Tl phytostabilization. In the case of the other analyzed tree species, their potential for effective phytoextraction was markedly lower. Further studies on the use of A. platanoides in phytoremediation would be worth conducting.

  7. Intraspecific Variation in Armillaria Species from Shrubs and Trees in Northwestern Spain

    OpenAIRE

    O. Aguín; J.P. Mansilla; M.J. Sainz

    2004-01-01

    Until recently, the identification of Armillaria species relied upon morphological characteristics and mating tests, but now molecular techniques based on polymorphisms in the IGS region of the fungal rDNA are more commonly used, since these are more rapid and reliable. Differences found in RFLP patterns identifying Armillaria species have suggested the existence of intraspecific variation. In this work, 185 Armillaria isolates from different plant species (including fruit trees, ...

  8. Impacts of Human Activities on Tree Species Composition Along the Forest Savanna Boundary in Nigeria

    Directory of Open Access Journals (Sweden)

    Christiana Ndidi Egbinola

    2016-02-01

    Full Text Available The study investigated the tree species composition along the forest-savanna boundary in Oyo state of Nigeria with the aim of assessing the impact of human activities on the floristic composition. A transect was placed along the study area and species data was collected from quadrats placed in study plots within different study sites. Detrended Correspondence Analysis (DCA was used to determine vegetation assemblages, while both correlation and the analysis of variance (ANOVA were used to show the relationship between species in the different study sites. Results of the DCA revealed three species assemblages, an area with only forest species, another with only savanna species and a third with both forest/savanna species. ANOVA results further revealed that within the forest and savanna assemblages, species in mature and successional sites were alike. The study therefore revealed that human activities’ within the region is leading to the establishment of savanna species and an elimination of forest species.

  9. Understanding the Science Behind Riparian Forest Buffers: Effects on Plant and Animal Communities

    OpenAIRE

    Klapproth, Julia C.; Johnson, James E. (James Eric), 1952-

    2009-01-01

    Discusses riparian forests' ability to support many species of wildlife and explains that the importance of a particular riparian area for wildlife will depend on the size of the area, adjoining land uses, riparian vegetation, features inside the area, and the wildlife species of interest.

  10. Relationship between Leaf Surface Characteristics and Particle Capturing Capacities of Different Tree Species in Beijing

    Directory of Open Access Journals (Sweden)

    Weikang Zhang

    2017-03-01

    Full Text Available Leaf surface is a multifunctional interface between a plant and its environment, which affects both ecological and biological processes. Leaf surface topography directly affects microhabitat availability and ability for deposition. In this study, atomic force microscopy (AFM and the resuspended particulate matter method were applied to evaluate the adsorptive capacity of the leaf surface. Patterns of particulate‐capturing capacities in different tree species and the effect of leaf surface features on these capacities were explored. Results indicated the following: (1 more total suspended particles (TSP per unit leaf area were captured by coniferous tree species than by broad‐leaved tree species in a particular order—i.e., Pinus tabuliformis > Pinus bungeana > Salix matsudana > Acer truncatum > Ginkgo biloba > Populus tomentosa; (2 Significant seasonal variation in particulate‐capturing capacities were determined. During the observation period, the broad‐leaved tree species capturing TSP and coarse particulate matter (PM10 clearly exhibited a ∩‐shape pattern— that is, increasing initially and later on decreasing; meanwhile, the ∩‐shape pattern was not clearly shown in P. tabuliformis and P. bungeana. However, no obvious patterns in the absorption of fine particulate matter (PM2.5 were found in the tested tree species; (3 The leaf surface topography, as observed by AFM and scanning electron microscopy, revealed that the broad‐leaved tree exhibits a good correlation between micro‐roughness of leaf surfaces and density of particles settling on leaf surfaces over time. However, the main factors affecting the adsorptive capacities of the leaves in coniferous trees are the number of stomata as well as the amount of epicuticular wax and the properties of the cuticle in different seasons.

  11. Regenerative Resilience of Tree Species in a Degraded Forest within Mt Kenya Ecosystem

    International Nuclear Information System (INIS)

    Omenda, T.O; Kariuki, J.G; Kamondo, B.M; Kiamba, J.K

    2007-01-01

    There is widespread human induced degradation of natural forest in Kenya. The major challenge to this situation is to devise cost effective rehabilitation approaches to reverse this trend. A study was conducted in Nyanza province of Kenya describing the structure and diversity of a disturbed natural forest and understanding the role so various propagules, namely seed, soil seed bank and coppices in post-disturbance recovery. The pre-disturbance forest type was a podo-Cassipourea-Teclea tropical montane forest. Four 350 m long line-plot transects were randomly located within the forest. Tree and stump data were obtained from 20*20 m plots located at 50 m intervals, while sapling, seeding and soil seed bank data were obtained from 5*5 m, 1*1 m and 0.2*0.2*0.5 subplots respectively, nested within the large plot. An 'Index of Species Resilence' that defines their continued was developed based on the tree species ability to coppice and their representation in seedling, sapling and tree stages. The forest condition was highly heterogeneous as determined through spatial distribution of basal area, height and diameter of breast height (dbh) of trees and cut stumps, the latter an indicator of disturbance. The Resilience Index indicated that, out of the 40 tree species found in the forest, only 30% had stable presence while 50% had an unstable presence characterized by in key succession stages-implying low auto-recovery potential. Results indicated that, coppicing had a more critical role in regeneration than previously thought, with 78% of all cut-tree species coppicing while only 27.5% of all the trees species regenerated from seed. The role of soil seed bank in auto-recovery was insignificant in this site. The apparent high coppicing potential presents a new opportunity for managing natural forests

  12. Estimating tree bole volume using artificial neural network models for four species in Turkey.

    Science.gov (United States)

    Ozçelik, Ramazan; Diamantopoulou, Maria J; Brooks, John R; Wiant, Harry V

    2010-01-01

    Tree bole volumes of 89 Scots pine (Pinus sylvestris L.), 96 Brutian pine (Pinus brutia Ten.), 107 Cilicica fir (Abies cilicica Carr.) and 67 Cedar of Lebanon (Cedrus libani A. Rich.) trees were estimated using Artificial Neural Network (ANN) models. Neural networks offer a number of advantages including the ability to implicitly detect complex nonlinear relationships between input and output variables, which is very helpful in tree volume modeling. Two different neural network architectures were used and produced the Back propagation (BPANN) and the Cascade Correlation (CCANN) Artificial Neural Network models. In addition, tree bole volume estimates were compared to other established tree bole volume estimation techniques including the centroid method, taper equations, and existing standard volume tables. An overview of the features of ANNs and traditional methods is presented and the advantages and limitations of each one of them are discussed. For validation purposes, actual volumes were determined by aggregating the volumes of measured short sections (average 1 meter) of the tree bole using Smalian's formula. The results reported in this research suggest that the selected cascade correlation artificial neural network (CCANN) models are reliable for estimating the tree bole volume of the four examined tree species since they gave unbiased results and were superior to almost all methods in terms of error (%) expressed as the mean of the percentage errors. 2009 Elsevier Ltd. All rights reserved.

  13. Beyond cool: adapting upland streams for climate change using riparian woodlands.

    Science.gov (United States)

    Thomas, Stephen M; Griffiths, Siân W; Ormerod, Steve J

    2016-01-01

    Managed adaptation could reduce the risks of climate change to the world's ecosystems, but there have been surprisingly few practical evaluations of the options available. For example, riparian woodland is advocated widely as shade to reduce warming in temperate streams, but few studies have considered collateral effects on species composition or ecosystem functions. Here, we use cross-sectional analyses at two scales (region and within streams) to investigate whether four types of riparian management, including those proposed to reduce potential climate change impacts, might also affect the composition, functional character, dynamics and energetic resourcing of macroinvertebrates in upland Welsh streams (UK). Riparian land use across the region had only small effects on invertebrate taxonomic composition, while stable isotope data showed how energetic resources assimilated by macroinvertebrates in all functional guilds were split roughly 50:50 between terrestrial and aquatic origins irrespective of riparian management. Nevertheless, streams draining the most extensive deciduous woodland had the greatest stocks of coarse particulate matter (CPOM) and greater numbers of 'shredding' detritivores. Stream-scale investigations showed that macroinvertebrate biomass in deciduous woodland streams was around twice that in moorland streams, and lowest of all in streams draining non-native conifers. The unexpected absence of contrasting terrestrial signals in the isotopic data implies that factors other than local land use affect the relative incorporation of allochthonous subsidies into riverine food webs. Nevertheless, our results reveal how planting deciduous riparian trees along temperate headwaters as an adaptation to climate change can modify macroinvertebrate function, increase biomass and potentially enhance resilience by increasing basal resources where cover is extensive (>60 m riparian width). We advocate greater urgency in efforts to understand the ecosystem

  14. Intercropping With Fruit Trees Increases Population Abundance and Alters Species Composition of Spider Mites on Cotton.

    Science.gov (United States)

    Li, Haiqiang; Pan, Hongsheng; Wang, Dongmei; Liu, Bing; Liu, Jian; Zhang, Jianping; Lu, Yanhui

    2018-05-05

    With the recent increase in planting of fruit trees in southern Xinjiang, the intercropping of fruit trees and cotton has been widely adopted. From 2014 to 2016, a large-scale study was conducted in Aksu, an important agricultural area in southern Xinjiang, to compare the abundance and species composition of spider mites in cotton fields under jujube-cotton, apple-cotton, and cotton monocrop systems. The abundance of spider mites in cotton fields under both intercropping systems was generally higher than in the cotton monocrop. The species composition of spider mites also differed greatly between cotton intercropped with apple or jujube compared to the cotton monocrop. The relative proportion of Tetranychus truncates Ehara (Acari: Tetranychidae) in the species complex generally increased while that of another spider mite, Tetranychus dunhuangensis Wang (Acari: Tetranychidae), decreased under fruit tree-cotton systems. More attention should be paid to the monitoring and management of spider mites, especially T. truncates in this important region of China.

  15. Tree species traits cause divergence in soil acidification during four decades of postagricultural forest development

    DEFF Research Database (Denmark)

    Schrijver, An de; Frenne, Pieter de; Staelens, Jeroen

    2012-01-01

    -depth understanding of tree species-specific effects on soil acidification is therefore crucial, particularly in view of the predicted global increases in acidifying nitrogen (N) deposition. Here, we report soil acidification rates in a chronosequence of broadleaved deciduous forests planted on former arable land...... and unequivocally drives postagricultural forests towards more acidic conditions, but the rate of soil acidification is also determined by the tree species-specific leaf litter quality and litter decomposition rates. We propose that the intrinsic differences in leaf litter quality among tree species create...... fundamentally different nutrient cycles within the ecosystem, both directly through the chemical composition of the litter and indirectly through its effects on the size and composition of earthworm communities. Poor leaf litter quality contributes to the absence of a burrowing earthworm community, which...

  16. The role of selected tree species in industrial sewage sludge/flotation tailing management.

    Science.gov (United States)

    Mleczek, Mirosław; Rutkowski, Paweł; Niedzielski, Przemysław; Goliński, Piotr; Gąsecka, Monika; Kozubik, Tomisław; Dąbrowski, Jędrzej; Budzyńska, Sylwia; Pakuła, Jarosław

    2016-11-01

    The aim of the study was to estimate the ability of ten tree and bush species to tolerate and accumulate Cd, Cu, Pb, Zn, and As species [As(III), As(V), and total organic arsenic] in industrial sewage sludge extremely contaminated with arsenic (almost 27.5 g kg(-1)) in a pot experiment. The premise being that it will then be possible to select the most promising tree/bush species, able to grow in the vicinity of dams where sewage sludge/flotation tailings are used as landfill. Six of the ten tested tree species were able to grow on the sludge. The highest content of total As was observed in Betula pendula roots (30.0 ± 1.3 mg kg(-1) DW), where the dominant As species was the toxic As(V). The highest biomass of Quercus Q1 robur (77.3 § 2.6 g) and Acer platanoides (76.0 § 4.9 g) was observed. A proper planting of selected tree species that are able to thrive on sewage sludge/flotation tailings could be an interesting and promising way to protect dams. By utilizing differences in their root systems and water needs, we will be able to reduce the risk of fatal environmental disasters.

  17. Forest tree species discrimination in western Himalaya using EO-1 Hyperion

    Science.gov (United States)

    George, Rajee; Padalia, Hitendra; Kushwaha, S. P. S.

    2014-05-01

    The information acquired in the narrow bands of hyperspectral remote sensing data has potential to capture plant species spectral variability, thereby improving forest tree species mapping. This study assessed the utility of spaceborne EO-1 Hyperion data in discrimination and classification of broadleaved evergreen and conifer forest tree species in western Himalaya. The pre-processing of 242 bands of Hyperion data resulted into 160 noise-free and vertical stripe corrected reflectance bands. Of these, 29 bands were selected through step-wise exclusion of bands (Wilk's Lambda). Spectral Angle Mapper (SAM) and Support Vector Machine (SVM) algorithms were applied to the selected bands to assess their effectiveness in classification. SVM was also applied to broadband data (Landsat TM) to compare the variation in classification accuracy. All commonly occurring six gregarious tree species, viz., white oak, brown oak, chir pine, blue pine, cedar and fir in western Himalaya could be effectively discriminated. SVM produced a better species classification (overall accuracy 82.27%, kappa statistic 0.79) than SAM (overall accuracy 74.68%, kappa statistic 0.70). It was noticed that classification accuracy achieved with Hyperion bands was significantly higher than Landsat TM bands (overall accuracy 69.62%, kappa statistic 0.65). Study demonstrated the potential utility of narrow spectral bands of Hyperion data in discriminating tree species in a hilly terrain.

  18. Genetic structure of two pseudoscorpion species living in tree hollows in Sweden

    Directory of Open Access Journals (Sweden)

    Ranius, T.

    2002-12-01

    Full Text Available Two saproxylic pseudoscorpions, Larca lata and Allochernes wideri, were compared in an analysis of genetic structure in southern Sweden. Allochernes wideri is a relatively widely distributed species that occurs in single-standing trees and in small tree hollows, while L. lata is on the Swedish red list and confined to larger assemblages of very old trees with hollows containing large amounts of wood mould. In A. wideri, the polymorphism of PGM was used, whereas in L. lata the variation for PGI was studied. The genetic differentiation between trees within a site was low for both species, indicating that the migration between nearby trees is considerable despite the fact that phoretic dispersal has only been occasionally observed in these species. Between sites, situated four to 900 km from each other, the genetic differentiation was small both in A. wideri and L. lata with no difference between the species, when considered on the mainland only. The small differentiation suggests the habitat was fragmented recently (100-170 years ago. The relation between the rate of migration and long-term population survival and the risk of mis-interpretation due to selection for alleles is discussed

  19. Statistical analysis of texture in trunk images for biometric identification of tree species.

    Science.gov (United States)

    Bressane, Adriano; Roveda, José A F; Martins, Antônio C G

    2015-04-01

    The identification of tree species is a key step for sustainable management plans of forest resources, as well as for several other applications that are based on such surveys. However, the present available techniques are dependent on the presence of tree structures, such as flowers, fruits, and leaves, limiting the identification process to certain periods of the year. Therefore, this article introduces a study on the application of statistical parameters for texture classification of tree trunk images. For that, 540 samples from five Brazilian native deciduous species were acquired and measures of entropy, uniformity, smoothness, asymmetry (third moment), mean, and standard deviation were obtained from the presented textures. Using a decision tree, a biometric species identification system was constructed and resulted to a 0.84 average precision rate for species classification with 0.83accuracy and 0.79 agreement. Thus, it can be considered that the use of texture presented in trunk images can represent an important advance in tree identification, since the limitations of the current techniques can be overcome.

  20. Determination of incoming solar radiation in major tree species in Turkey.

    Science.gov (United States)

    Yilmaz, Osman Yalcin; Sevgi, Orhan; Koc, Ayhan

    2012-07-01

    Light requirements and spatial distribution of major forest tree species in Turkey hasn't been analyzed yet. Continuous surface solar radiation data, especially at mountainous-forested areas, are needed to put forward this relationship between forest tree species and solar radiation. To achieve this, GIS-based modeling of solar radiation is one of the methods used in rangelands to estimate continuous surface solar radiation. Therefore, mean monthly and annual total global solar radiation maps of whole Turkey were computed spatially using GRASS GIS software "r.sun" model under clear-sky (cloudless) conditions. 147498 pure forest stand point-based data were used in the study for calculating mean global solar radiation values of all the major forest tree species of Turkey. Beech had the lowest annual mean total global solar radiation value of 1654.87 kWh m(-2), whereas juniper had the highest value of 1928.89 kWh m(-2). The rank order of tree species according to the mean monthly and annual total global solar radiation values, using a confidence level of p solar radiation values of sites and light requirements of forest trees ranked similarly.

  1. Chemical investigation on wood tree species in a temperate forest, east-northern Romania

    Directory of Open Access Journals (Sweden)

    Teaca, C. A.

    2007-02-01

    Full Text Available A quantitative evaluation of wood chemical components for some tree species in a forest area from east-northern Romania is presented here, through a comparative study from 1964 to 2000. Investigation upon the wood tree-rings in a Quercus robur L. tree species, as a dominant species, as regards its chemical composition and structure of the natural polymer constituents - cellulose and lignin - was also performed through chemical methods to separate the main wood components, FT-IR spectroscopy, and thermogravimetry. Having in view the impact of climate and external factors (such as pollutant depositions, some possible correlations between wood chemical composition and its further use can be made. The FT-IR spectra give evidence of differences in the frequency domains of 3400-2900 cm-1 and 1730-1640 cm-1, due to some interactions between the chemical groups (OH, C=O. The crystallinity index of cellulose presents variations in the oak wood tree-rings. Thermogravimetry analyses show different behaviour of cellulose at thermal decomposition, as a function of radial growth and tree’s height. A preliminary chemical investigation of oak wood sawdust shows a relatively high content of mineral elements (ash, compared with a previous study performed in 1964, fact that may indicate an intense drying process of the oak tree, a general phenomenon present in European forests for this species.

  2. Lidar-based individual tree species classification using convolutional neural network

    Science.gov (United States)

    Mizoguchi, Tomohiro; Ishii, Akira; Nakamura, Hiroyuki; Inoue, Tsuyoshi; Takamatsu, Hisashi

    2017-06-01

    Terrestrial lidar is commonly used for detailed documentation in the field of forest inventory investigation. Recent improvements of point cloud processing techniques enabled efficient and precise computation of an individual tree shape parameters, such as breast-height diameter, height, and volume. However, tree species are manually specified by skilled workers to date. Previous works for automatic tree species classification mainly focused on aerial or satellite images, and few works have been reported for classification techniques using ground-based sensor data. Several candidate sensors can be considered for classification, such as RGB or multi/hyper spectral cameras. Above all candidates, we use terrestrial lidar because it can obtain high resolution point cloud in the dark forest. We selected bark texture for the classification criteria, since they clearly represent unique characteristics of each tree and do not change their appearance under seasonable variation and aged deterioration. In this paper, we propose a new method for automatic individual tree species classification based on terrestrial lidar using Convolutional Neural Network (CNN). The key component is the creation step of a depth image which well describe the characteristics of each species from a point cloud. We focus on Japanese cedar and cypress which cover the large part of domestic forest. Our experimental results demonstrate the effectiveness of our proposed method.

  3. Growth and reproduction respond differently to climate in three Neotropical tree species.

    Science.gov (United States)

    Alfaro-Sánchez, Raquel; Muller-Landau, Helene C; Wright, S Joseph; Camarero, J Julio

    2017-06-01

    The response of tropical forests to anthropogenic climate change is critically important to future global carbon budgets, yet remains highly uncertain. Here, we investigate how precipitation, temperature, solar radiation and dry- and wet-season lengths are related to annual tree growth, flower production, and fruit production in three moist tropical forest tree species using long-term datasets from tree rings and litter traps in central Panama. We also evaluated how growth, flower, and fruit production were interrelated. We found that growth was positively correlated with wet-season precipitation in all three species: Jacaranda copaia (r = 0.63), Tetragastris panamensis (r = 0.39) and Trichilia tuberculata (r = 0.39). Flowering and fruiting in Jacaranda were negatively related to current-year dry-season rainfall and positively related to prior-year dry-season rainfall. Flowering in Tetragastris was negatively related to current-year annual mean temperature while Trichilia showed no significant relationships of reproduction with climate. Growth was significantly related to reproduction only in Tetragastris, where it was positively related to previous year fruiting. Our results suggest that tree growth in moist tropical forest tree species is generally reduced by drought events such as those associated with strong El Niño events. In contrast, interannual variation in reproduction is not generally associated with growth and has distinct and species-specific climate responses, with positive effects of El Niño events in some species. Understanding these contrasting climate effects on tree growth and reproduction is critical to predicting changes in tropical forest dynamics and species composition under climate change.

  4. [Biomass allometric equations of nine common tree species in an evergreen broadleaved forest of subtropical China].

    Science.gov (United States)

    Zuo, Shu-di; Ren, Yin; Weng, Xian; Ding, Hong-feng; Luo, Yun-jian

    2015-02-01

    Biomass allometric equation (BAE) considered as a simple and reliable method in the estimation of forest biomass and carbon was used widely. In China, numerous studies focused on the BAEs for coniferous forest and pure broadleaved forest, and generalized BAEs were frequently used to estimate the biomass and carbon of mixed broadleaved forest, although they could induce large uncertainty in the estimates. In this study, we developed the species-specific and generalized BAEs using biomass measurement for 9 common broadleaved trees (Castanopsis fargesii, C. lamontii, C. tibetana, Lithocarpus glaber, Sloanea sinensis, Daphniphyllum oldhami, Alniphyllum fortunei, Manglietia yuyuanensis, and Engelhardtia fenzlii) of subtropical evergreen broadleaved forest, and compared differences in species-specific and generalized BAEs. The results showed that D (diameter at breast height) was a better independent variable in estimating the biomass of branch, leaf, root, aboveground section and total tree than a combined variable (D2 H) of D and H (tree height) , but D2H was better than D in estimating stem biomass. R2 (coefficient of determination) values of BAEs for 6 species decreased when adding H as the second independent variable into D- only BAEs, where R2 value for S. sinensis decreased by 5.6%. Compared with generalized D- and D2H-based BAEs, standard errors of estimate (SEE) of BAEs for 8 tree species decreased, and similar decreasing trend was observed for different components, where SEEs of the branch decreased by 13.0% and 20.3%. Therefore, the biomass carbon storage and its dynamic estimates were influenced largely by tree species and model types. In order to improve the accuracy of the estimates of biomass and carbon, we should consider the differences in tree species and model types.

  5. Complementary models of tree species-soil relationships in old-growth temperate forests

    Science.gov (United States)

    Cross, Alison; Perakis, Steven S.

    2011-01-01

    Ecosystem level studies identify plant soil feed backs as important controls on soil nutrient availability,particularly for nitrogen and phosphorus. Although site and species specific studies of tree species soil relationships are relatively common,comparatively fewer studies consider multiple coexisting speciesin old-growth forests across a range of sites that vary underlying soil fertility. We characterized patterns in forest floor and mineral soil nutrients associated with four common tree species across eight undisturbed old-growth forests in Oregon, USA, and used two complementary conceptual models to assess tree species soil relationships. Plant soil feedbacks that could reinforce sitelevel differences in nutrient availability were assessed using the context dependent relationships model, where by relative species based differences in each soil nutrient divergedorconvergedas nutrient status changed across sites. Tree species soil relationships that did not reflect strong feedbacks were evaluated using a site independent relationships model, where by forest floor and surface mineral soil nutrient tools differed consistently by tree species across sites,without variation in deeper mineral soils. We found that theorganically cycled elements carbon, nitrogen, and phosphorus exhibited context-dependent differences among species in both forest floor and mineral soil, and most of ten followed adivergence model,where by species differences were greatest at high-nutrient sites. These patterns are consistent with the oryemphasizing biotic control of these elements through plant soil feedback mechanisms. Site independent species differences were strongest for pool so if the weather able cations calcium, magnesium, potassium,as well as phosphorus, in mineral soils. Site independent species differences in forest floor nutrients we reattributable too nespecies that displayed significant greater forest floor mass accumulation. Our finding confirmed that site-independent and

  6. Rubisco activity and gene expression of tropical tree species under ...

    African Journals Online (AJOL)

    Tropical rain forests contain an ecologically and physiologically diverse range of vegetation and habitats. Sun-acclimated plants can be divided into two groups, shade-tolerant and shade-intolerant, according to the plant's physiological and genetic responses. Some tropical species have potential capacity for light damage ...

  7. A phylogenetic perspective on the individual species-area relationship in temperate and tropical tree communities.

    Science.gov (United States)

    Yang, Jie; Swenson, Nathan G; Cao, Min; Chuyong, George B; Ewango, Corneille E N; Howe, Robert; Kenfack, David; Thomas, Duncan; Wolf, Amy; Lin, Luxiang

    2013-01-01

    Ecologists have historically used species-area relationships (SARs) as a tool to understand the spatial distribution of species. Recent work has extended SARs to focus on individual-level distributions to generate individual species area relationships (ISARs). The ISAR approach quantifies whether individuals of a species tend have more or less species richness surrounding them than expected by chance. By identifying richness 'accumulators' and 'repellers', respectively, the ISAR approach has been used to infer the relative importance of abiotic and biotic interactions and neutrality. A clear limitation of the SAR and ISAR approaches is that all species are treated as evolutionarily independent and that a large amount of work has now shown that local tree neighborhoods exhibit non-random phylogenetic structure given the species richness. Here, we use nine tropical and temperate forest dynamics plots to ask: (i) do ISARs change predictably across latitude?; (ii) is the phylogenetic diversity in the neighborhood of species accumulators and repellers higher or lower than that expected given the observed species richness?; and (iii) do species accumulators, repellers distributed non-randomly on the community phylogenetic tree? The results indicate no clear trend in ISARs from the temperate zone to the tropics and that the phylogenetic diversity surrounding the individuals of species is generally only non-random on very local scales. Interestingly the distribution of species accumulators and repellers was non-random on the community phylogenies suggesting the presence of phylogenetic signal in the ISAR across latitude.

  8. Regeneration of Salicaceae riparian forests in the Northern Hemisphere: A new framework and management tool.

    Science.gov (United States)

    González, Eduardo; Martínez-Fernández, Vanesa; Shafroth, Patrick B; Sher, Anna A; Henry, Annie L; Garófano-Gómez, Virginia; Corenblit, Dov

    2018-04-25

    Human activities on floodplains have severely disrupted the regeneration of foundation riparian shrub and tree species of the Salicaceae family (Populus and Salix spp.) throughout the Northern Hemisphere. Restoration ecologists initially tackled this problem from a terrestrial perspective that emphasized planting. More recently, floodplain restoration activities have embraced an aquatic perspective, inspired by the expanding practice of managing river flows to improve river health (environmental flows). However, riparian Salicaceae species occupy floodplain and riparian areas, which lie at the interface of both terrestrial and aquatic ecosystems along watercourses. Thus, their regeneration depends on a complex interaction of hydrologic and geomorphic processes that have shaped key life-cycle requirements for seedling establishment. Ultimately, restoration needs to integrate these concepts to succeed. However, while regeneration of Salicaceae is now reasonably well-understood, the literature reporting restoration actions on Salicaceae regeneration is sparse, and a specific theoretical framework is still missing. Here, we have reviewed 105 peer-reviewed published experiences in restoration of Salicaceae forests, including 91 projects in 10 world regions, to construct a decision tree to inform restoration planning through explicit links between the well-studied biophysical requirements of Salicaceae regeneration and 17 specific restoration actions, the most popular being planting (in 55% of the projects), land contouring (30%), removal of competing vegetation (30%), site selection (26%), and irrigation (24%). We also identified research gaps related to Salicaceae forest restoration and discuss alternative, innovative and feasible approaches that incorporate the human component. Copyright © 2018 Elsevier Ltd. All rights reserved.

  9. The rubber tree genome reveals new insights into rubber production and species adaptation

    OpenAIRE

    Tang, Chaorong; Yang, Meng; Fang, Yongjun; Luo, Yingfeng; Gao, Shenghan; Xiao, Xiaohu; An, Zewei; Zhou, Binhui; Zhang, Bing; Tan, Xinyu; Yeang, Hoong Yeet; Qin, Yunxia; Yang, Jianghua; Lin, Qiang; Mei, Hailiang

    2016-01-01

    The Para rubber tree (Hevea brasiliensis) is an economically important tropical tree species that produces natural rubber, an essential industrial raw material. Here we present a high-quality genome assembly of this species (1.37 Gb, scaffold N50 = 1.28 Mb) that covers 93.8% of the genome (1.47 Gb) and harbours 43,792 predicted protein-coding genes. A striking expansion of the REF/SRPP (rubber elongation factor/small rubber particle protein) gene family and its divergence into several laticif...

  10. Effects of Drought and Rewetting on Growth and Gas Exchange of Minor European Broadleaved Tree Species

    Directory of Open Access Journals (Sweden)

    Jörg Kunz

    2016-10-01

    Full Text Available Widespread and economically important European tree species such as Norway spruce, Scots pine, and European beech are projected to be negatively affected by the increasing intensity and frequency of dry and hot conditions in a future climate. Hence, there is an increasing need to investigate the suitability of presumably more drought tolerant species to ensure future ecological stability, biodiversity, and productivity of forests. Based on their distribution patterns and climatic envelopes, the rare, minor broadleaved tree species Sorbus torminalis ((L. CRANTZ, S. domestica (L., Acer campestre (L., and A. platanoides (L. are assumed to be drought tolerant, however, there is only limited experimental basis to support that notion. This study aimed at quantifying growth and gas exchange of seedlings of these species during drought conditions, and their capacity to recover following drought. For that purpose, they were compared to the common companion species Quercus petraea ((MATTUSCHKA LIEBL. and Fagus sylvatica (L.. Here, potted seedlings of these species were exposed to water limitation followed by rewetting cycles in a greenhouse experiment. Photosynthesis and transpiration rates, stomatal conductance as well as root and shoot growth rates indicated a high drought resistance of A. campestre and A. platanoides. Sorbus domestica showed a marked ability to recover after drought stress. Therefore, we conclude that these minor tree species have the potential to enrich forests on drought-prone sites. Results from this pot experiment need to be complemented by field studies, in which the drought response of the species is not influenced by restrictions to root development.

  11. Stem CO2 efflux in six co-occurring tree species: underlying factors and ecological implications.

    Science.gov (United States)

    Rodríguez-Calcerrada, Jesús; López, Rosana; Salomón, Roberto; Gordaliza, Guillermo G; Valbuena-Carabaña, María; Oleksyn, Jacek; Gil, Luis

    2015-06-01

    Stem respiration plays a role in species coexistence and forest dynamics. Here we examined the intra- and inter-specific variability of stem CO2 efflux (E) in dominant and suppressed trees of six deciduous species in a mixed forest stand: Fagus sylvatica L., Quercus petraea [Matt.] Liebl, Quercus pyrenaica Willd., Prunus avium L., Sorbus aucuparia L. and Crataegus monogyna Jacq. We conducted measurements in late autumn. Within species, dominants had higher E per unit stem surface area (Es ) mainly because sapwood depth was higher than in suppressed trees. Across species, however, differences in Es corresponded with differences in the proportion of living parenchyma in sapwood and concentration of non-structural carbohydrates (NSC). Across species, Es was strongly and NSC marginally positively related with an index of drought tolerance, suggesting that slow growth of drought-tolerant trees is related to higher NSC concentration and Es . We conclude that, during the leafless period, E is indicative of maintenance respiration and is related with some ecological characteristics of the species, such as drought resistance; that sapwood depth is the main factor explaining variability in Es within species; and that the proportion of NSC in the sapwood is the main factor behind variability in Es among species. © 2014 John Wiley & Sons Ltd.

  12. The right tree for the job? perceptions of species suitability for the provision of ecosystem services.

    Science.gov (United States)

    Smaill, Simeon J; Bayne, Karen M; Coker, Graham W R; Paul, Thomas S H; Clinton, Peter W

    2014-04-01

    Stakeholders in plantation forestry are increasingly aware of the importance of the ecosystem services and non-market values associated with forests. In New Zealand, there is significant interest in establishing species other than Pinus radiata D. Don (the dominant plantation species) in the belief that alternative species are better suited to deliver these services. Significant risk is associated with this position as there is little objective data to support these views. To identify which species were likely to be planted to deliver ecosystem services, a survey was distributed to examine stakeholder perceptions. Stakeholders were asked which of 15 tree attributes contributed to the provision of five ecosystem services (amenity value, bioenergy production, carbon capture, the diversity of native habitat, and erosion control/water quality) and to identify which of 22 candidate tree species possessed those attributes. These data were combined to identify the species perceived most suitable for the delivery of each ecosystem service. Sequoia sempervirens (D.Don) Endl. closely matched the stakeholder derived ideotypes associated with all five ecosystem services. Comparisons to data from growth, physiological and ecological studies demonstrated that many of the opinions held by stakeholders were inaccurate, leading to erroneous assumptions regarding the suitability of most candidate species. Stakeholder perceptions substantially influence tree species selection, and plantations established on the basis of inaccurate opinions are unlikely to deliver the desired outcomes. Attitudinal surveys associated with engagement campaigns are essential to improve stakeholder knowledge, advancing the development of fit-for-purpose forest management that provides the required ecosystem services.

  13. Whitefly Pest Species (Homoptera: Aleyrodidae) on Citrus Trees

    OpenAIRE

    Katja Žanić; Sonja Kačić; Miro Katalinić

    2000-01-01

    Today, the Citrus whitefly, Dialeurodes citri (Ashmead), is a very important pest on all Citrus species throughout the citrus growing areas in Croatia. It causes direct damage by sucking the plant juice from the leaves. Furthermore, immatures excrete honeydew that stimulates sooy mold. The presence of sooty mold on contaminated leaves interferes with the photosynthesis of plants. Citrus fruits coated by sooty mold lose its market value. Because Dialeurodes citri is poorly known in Croatia, th...

  14. Estimating the community-level impact of the riparian alien species Mimulus guttatus by using a replicated BACI field experiment

    Czech Academy of Sciences Publication Activity Database

    Hejda, Martin; Pyšek, Petr

    2008-01-01

    Roč. 7, - (2008), s. 250-257 ISSN 1619-0033 R&D Projects: GA ČR(CZ) GA206/05/0323 Grant - others:ALARM(XE) GOCE-CT-2003-506675 Institutional research plan: CEZ:AV0Z60050516 Keywords : plant invasions * impact * species diversity Subject RIV: EF - Botanics

  15. Foliage biomass qualitative indices of selected forest forming tree species in Ukrainian Steppe

    Directory of Open Access Journals (Sweden)

    Sytnyk Svitlana

    2017-06-01

    Full Text Available Our study objective was research on the assimilation component of aboveground biomass of trees and its correlation with mensurational indices of trees (age, diameter and height in stands of the main forest forming species in the Ukrainian Northern Steppe zone - Pinus sylvestris L. (Scots pine and Robinia pseudoacacia L. (Black locust. The research was carried out in forest stands subordinated to the State Agency of Forest Resources of Ukraine. We used experimental data collected on sample plots established during years 2014-2016. The main research results prove that the foliage share in the tree greenery biomass structure had a wide range of values. For both investigated species, a positive correlation was found between the dry matter content in the tree foliage and the tree age, height and diameter. The foliage share in tree greenery biomass decreased with increasing mensurational index values. Correlation analysis revealed linear relationships between the mensurational indices and the discussed aboveground live biomass parameters. The closest correlation was observed between the stand age, mean stand diameter, mean stand height and dry matter content in the foliage.

  16. Survey of vegetation and its diametric distribution in an area of cerrado sensu stricto and riparian forest fragment at Dois Irmãos stream in the Area of Environmental Protection (APA of Cafuringa, Federal District, Brazil.

    Directory of Open Access Journals (Sweden)

    José Elias de Paula

    2009-09-01

    Full Text Available All individual trees with a diameter at breast height (DBH of over 5cm, as well as the natural succession, were identified in 2,500m2 of the savannah (cerrado sensu stricto area and in 5,000m2 of the “Dois Irmãos” riparian forest vegetation (15º30’19”S and 48º06’18”W. The floristic composition of the cerrado sensu stricto was composed by 100 trees distributed in 25 species, and the riparian forest consisted of 155 trees distributed in 55 species. The natural regeneration was formed with 211 and 287 individuals in the cerrado sensu stricto and riparian forest distributed into 38 and 55 species respectively. The basal areas of the trees occupied 3.40m2.ha-1 in the cerrado sensu stricto and 5.08m2.ha-1 in the riparian forest. The diametric distribution curves for both plant communities, adjusted by the Meyers equation, demonstrated a typical tendency of reversed-J shape with strongly antropic action in the 11 to 17cm diametric classes.

  17. Hide and go seek with temperature signals of Northeastern US Tree Species

    Science.gov (United States)

    Alexander, M. R.; Pederson, N.; Bishop, D. A.; Pearl, J. K.; Anchukaitis, K. J.

    2017-12-01

    Improving reconstructions of past climate is vital in providing long-term context for regional climate change. There have been only two published reconstructions of past temperatures in the northeastern U.S. (NEUS) since the 1980s, one based on Picea rubens, and one out in 2017 based upon Chamaecyparis thyoides (Atlantic white cedar; AWC). Because increased species diversity generally improves dendrohydroclimatic reconstructions and both Picea rubens and AWC have limitations as paleoproxies due to land-use and air pollution, we conducted a series of tests to ask, "Does species diversity improve reconstructions of temperature history in the northeastern United States?" The first two tests were performed on AWC and then a network of AWC and Picea rubens. Subsequent tests added groups of species or genera from a network of 230 tree-ring chronologies beginning with those having the strongest relation between warming temperatures and increased growth. PC1 of the AWC test represented 40% of the variance and showed a significant positive relation with winter temperature (r = 0.38). As additional species were included, the "winter temperature PC" accounted for less of the overall variance, ranging from 26% of the variance in test 2 to 5% by test 5. AWC is swamped by the hydroclimatic signal that dominates our network. Populations of species such as Fagus grandifolia, Fraxinus nigra, Juniperus virginiana, Liriodendron tulipifera, Pinus rigida, and Pinus strobus from our network loaded strongest with AWC on the winter temperature PC. Including multiple species accounted for almost 20% more variance in the winter temperature record than AWC alone. Although drought is a dominating influence of tree growth in this region, our results suggest that winter temperatures are recorded within NEUS tree rings. Increasing the species diversity of tree proxies has the potential for improving reconstruction of paleotemperatures in regions lacking latitudinal or altitudinal tree lines

  18. Legal Mechanisms for Protecting Riparian Resource Values

    Science.gov (United States)

    Lamb, Berton L.; Lord, Eric

    1992-04-01

    Riparian resources include the borders of rivers, lakes, ponds, and potholes. These border areas are very important for a number of reasons, including stream channel maintenance, flood control, aesthetics, erosion control, fish and wildlife habitat, recreation, and water quality maintenance. These diverse functions are not well protected by law or policy. We reviewed law and policies regarding endangered species habitat designation, land use planning, grazing management, water allocation, takings, and federal permits and licenses, along with the roles of federal, state, and local governments. We discuss the politics of implementing these policies, focusing on the difficulties in changing entrenched water and land use practices. Our review indicates a lack of direct attention to riparian ecosystem issues in almost all environmental and land use programs at every level of government. Protection of riparian resource values requires a means to integrate existing programs to focus on riparian zones.

  19. An object-based approach for tree species extraction from digital orthophoto maps

    Science.gov (United States)

    Jamil, Akhtar; Bayram, Bulent

    2018-05-01

    Tree segmentation is an active and ongoing research area in the field of photogrammetry and remote sensing. It is more challenging due to both intra-class and inter-class similarities among various tree species. In this study, we exploited various statistical features for extraction of hazelnut trees from 1 : 5000 scaled digital orthophoto maps. Initially, the non-vegetation areas were eliminated using traditional normalized difference vegetation index (NDVI) followed by application of mean shift segmentation for transforming the pixels into meaningful homogeneous objects. In order to eliminate false positives, morphological opening and closing was employed on candidate objects. A number of heuristics were also derived to eliminate unwanted effects such as shadow and bounding box aspect ratios, before passing them into the classification stage. Finally, a knowledge based decision tree was constructed to distinguish the hazelnut trees from rest of objects which include manmade objects and other type of vegetation. We evaluated the proposed methodology on 10 sample orthophoto maps obtained from Giresun province in Turkey. The manually digitized hazelnut tree boundaries were taken as reference data for accuracy assessment. Both manually digitized and segmented tree borders were converted into binary images and the differences were calculated. According to the obtained results, the proposed methodology obtained an overall accuracy of more than 85 % for all sample images.

  20. Tree Species Suitability to Bioswales and Impact on the Urban Water Budget.

    Science.gov (United States)

    Scharenbroch, Bryant C; Morgenroth, Justin; Maule, Brian

    2016-01-01

    Water movement between soil and the atmosphere is restricted by hardscapes in the urban environment. Some green infrastructure is intended to increase infiltration and storage of water, thus decreasing runoff and discharge of urban stormwater. Bioswales are a critical component of a water-sensitive urban design (or a low-impact urban design), and incorporation of trees into these green infrastructural components is believed to be a novel way to return stored water to the atmosphere via transpiration. This research was conducted in The Morton Arboretum's main parking lot, which is one of the first and largest green infrastructure installations in the midwestern United States. The parking lot is constructed of permeable pavers and tree bioswales. Trees in bioswales were evaluated for growth and condition and for their effects on water cycling via transpiration. Our data indicate that trees in bioswales accounted for 46 to 72% of total water outputs via transpiration, thereby reducing runoff and discharge from the parking lot. By evaluating the stomatal conductance, diameter growth, and condition of a variety of tree species in these bioswales, we found that not all species are equally suited for bioswales and that not all are equivalent in their transpiration and growth rates, thereby contributing differentially to the functional capacity of bioswales. We conclude that species with high stomatal conductance and large mature form are likely to contribute best to bioswale function. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

  1. Hydraulic Function in Australian Tree Species during Drought-Induced Mortality

    Science.gov (United States)

    Tissue, D.; Maier, C.; Creek, D.; Choat, B.

    2016-12-01

    Drought induced tree mortality and decline are key issues facing forest ecology and management. Here, we primarily investigated the hydraulic limitations underpinning drought-induced mortality in three Australian tree species. Using field-based large rainout shelters, three angiosperm species (Casuarina cunninghamiana, Eucalyptus sideroxylon, Eucalyptus tereticornis) were subjected to two successive drought and recovery cycles, prior to a subsequent long and extreme drought to mortality; total duration of experiment was 2.5 years. Leaf gas exchange, leaf and stem hydraulics, and carbon reserves were monitored during the experiment. Trees died as a result of failure in the hydraulic transport system, primarily related to water stress induced embolism. Stomatal closure occurred prior to the induction of significant embolism in the stem xylem of all species. Nonetheless, trees suffered a rapid decline in xylem water potential and increase in embolism during the severe drought treatment. Trees died at water potentials causing greater than 90% loss of hydraulic conductivity in the stem, providing support for the theory that lethal water potential is correlated with complete loss of hydraulic function in the stem xylem of angiosperms.

  2. Divergent Hydraulic Safety Strategies in Three Co-occurring Anacardiaceae Tree Species in a Chinese Savanna.

    Science.gov (United States)

    Zhang, Shu-Bin; Zhang, Jiao-Lin; Cao, Kun-Fang

    2016-01-01

    Vulnerability segmentation, the condition under which plant leaves are more vulnerable to drought-induced cavitation than stems, may act as a "safety valve" to protect stems from hydraulic failure. Evergreen, winter-deciduous, and drought-deciduous tree species co-occur in tropical savannas, but there have been no direct studies on the role of vulnerability segmentation and stomatal regulation in maintaining hydraulic safety in trees with these three leaf phenologies. To this end, we selected three Anacardiaceae tree species co-occurring in a Chinese savanna, evergreen Pistacia weinmanniifolia , drought-deciduous Terminthia paniculata , and winter-deciduous Lannea coromandelica , to study inter-species differentiation in leaf and stem hydraulic safety. We found that the two deciduous species had significantly higher sapwood-specific hydraulic conductivity and leaf-specific hydraulic conductance than the evergreen species. Moreover, two deciduous species were more vulnerable to stem cavitation than the evergreen species, although both drought-deciduous species and evergreen species had drought-resistance leaves. The evergreen species maintained a wide hydraulic safety margin (HSM) in stems and leaves; which was achieved by embolism resistance of both stems and leaves and isohydric stomatal control. Both deciduous species had limited HSMs in stems and leaves, being isohydric in the winter-deciduous species and anisohydric in drought-deciduous species. The difference in water potential at 50% loss of hydraulic conductivity between the leaves and the terminal stems (P50 leaf-stem ) was positive in P. weinmanniifolia and L. coromandelica , whereas, T. paniculata exhibited a lack of vulnerability segmentation. In addition, differences in hydraulic architecture were found to be closely related to other structural traits, i.e., leaf mass per area, wood density, and sapwood anatomy. Overall, the winter-deciduous species exhibits a drought-avoidance strategy that maintains

  3. Patterns of Tree Species Diversity in Relation to Climatic Factors on the Sierra Madre Occidental, Mexico

    Science.gov (United States)

    Silva-Flores, Ramón; Pérez-Verdín, Gustavo; Wehenkel, Christian

    2014-01-01

    Biological diversity can be defined as variability among living organisms from all sources, including terrestrial organisms, marine and other aquatic ecosystems, and the ecological complexes which they are part of. This includes diversity within species, between species, and of ecosystems. Numerous diversity indices combine richness and evenness in a single expression, and several climate-based explanations have been proposed to explain broad-scale diversity patterns. However, climate-based water-energy dynamics appears to be an essential factor that determines patterns of diversity. The Mexican Sierra Madre Occidental occupies an area of about 29 million hectares and is located between the Neotropical and Holarctic ecozones. It shelters a high diversity of flora, including 24 different species of Pinus (ca. 22% on the whole), 54 species of Quercus (ca. 9–14%), 7 species of Arbutus (ca. 50%) and many other trees species. The objectives of this study were to model how tree species diversity is related to climatic and geographic factors and stand density and to test the Metabolic Theory, Productivity-Diversity Hypothesis, Physiological Tolerance Hypothesis, Mid-Domain Effect, and the Water-Energy Dynamic Theory on the Sierra Madre Occidental, Durango. The results supported the Productivity-Diversity Hypothesis, Physiological Tolerance Hypothesis and Water-Energy Dynamic Theory, but not the Mid-Domain Effect or Metabolic Theory. The annual aridity index was the variable most closely related to the diversity indices analyzed. Contemporary climate was found to have moderate to strong effects on the minimum, median and maximum tree species diversity. Because water-energy dynamics provided a satisfactory explanation for the patterns of minimum, median and maximum diversity, an understanding of this factor is critical to future biodiversity research. Quantile regression of the data showed that the three diversity parameters of tree species are generally higher in cold

  4. Patterns of tree species diversity in relation to climatic factors on the Sierra Madre Occidental, Mexico.

    Science.gov (United States)

    Silva-Flores, Ramón; Pérez-Verdín, Gustavo; Wehenkel, Christian

    2014-01-01

    Biological diversity can be defined as variability among living organisms from all sources, including terrestrial organisms, marine and other aquatic ecosystems, and the ecological complexes which they are part of. This includes diversity within species, between species, and of ecosystems. Numerous diversity indices combine richness and evenness in a single expression, and several climate-based explanations have been proposed to explain broad-scale diversity patterns. However, climate-based water-energy dynamics appears to be an essential factor that determines patterns of diversity. The Mexican Sierra Madre Occidental occupies an area of about 29 million hectares and is located between the Neotropical and Holarctic ecozones. It shelters a high diversity of flora, including 24 different species of Pinus (ca. 22% on the whole), 54 species of Quercus (ca. 9-14%), 7 species of Arbutus (ca. 50%) and many other trees species. The objectives of this study were to model how tree species diversity is related to climatic and geographic factors and stand density and to test the Metabolic Theory, Productivity-Diversity Hypothesis, Physiological Tolerance Hypothesis, Mid-Domain Effect, and the Water-Energy Dynamic Theory on the Sierra Madre Occidental, Durango. The results supported the Productivity-Diversity Hypothesis, Physiological Tolerance Hypothesis and Water-Energy Dynamic Theory, but not the Mid-Domain Effect or Metabolic Theory. The annual aridity index was the variable most closely related to the diversity indices analyzed. Contemporary climate was found to have moderate to strong effects on the minimum, median and maximum tree species diversity. Because water-energy dynamics provided a satisfactory explanation for the patterns of minimum, median and maximum diversity, an understanding of this factor is critical to future biodiversity research. Quantile regression of the data showed that the three diversity parameters of tree species are generally higher in cold

  5. Modern tree species composition reflects ancient Maya "forest gardens" in northwest Belize.

    Science.gov (United States)

    Ross, Nanci J

    2011-01-01

    Ecology and ethnobotany were integrated to assess the impact of ancient Maya tree-dominated home gardens (i.e., "forest gardens"), which contained a diversity of tree species used for daily household needs, on the modern tree species composition of a Mesoamerican forest. Researchers have argued that the ubiquity of these ancient gardens throughout Mesoamerica led to the dominance of species useful to Maya in the contemporary forest, but this pattern may be localized depending on ancient land use. The tested hypothesis was that species composition would be significantly different between areas of dense ancient residential structures (high density) and areas of little or no ancient settlement (low density). Sixty-three 400-m2 plots (31 high density and 32 low density) were censused around the El Pilar Archaeological Reserve in northwestern Belize. Species composition was significantly different, with higher abundances of commonly utilized "forest garden" species still persisting in high-density forest areas despite centuries of abandonment. Subsequent edaphic analyses only explained 5% of the species composition differences. This research provides data on the long-term impacts of Maya forests gardens for use in development of future conservation models. For Mesoamerican conservation programs to work, we must understand the complex ecological and social interactions within an ecosystem that developed in intimate association with humans.

  6. Growth and elemental content of two tree species growing on abandoned coal fly ash basins

    International Nuclear Information System (INIS)

    Carlson, C.L.; Adriano, D.C.

    1991-01-01

    Differences in aboveground tissue concentrations of trace elements were assessed for sweetgum (Liquidambar styraciflua L.) and sycamore (Plantanus occidentalis L.) growing on two abandoned coal fly ash basins and a control soil. The wet basin (pH = 5.58) had originally received precipitator ash in an ash-water slurry, while the dry basin (pH = 8.26) had received both precipitator and bottom ash in dry form. In general, trees from the wet basin exhibited elevated trace element concentrations in comparison to the controls, while the dry basin trees exhibited reduced concentrations. On eof the most striking differenced in elemental concentrations among the ash basin and control trees was observed for Mn, with the control trees exhibiting concentrations orders of magnitude greater than the ash basin trees. Differences in foliar trace element concentrations among the sites can generally be explained by differences in substrate trace element concentrations and/or substrate pH. While trees from the wet ash basin generally had the highest trace element concentrations, these trees also attained the greatest height and diameter growth, suggesting that the elevated trace element concentrations in the wet basin substrate are not limiting the establishment of these two species. The greater height and diameter growth of the wet basin trees is presumably a result of the greater water-holding capacity of the substrate on this site. Differences in growth and tissue concentrations between sweetgum and sycamore highlight the importance of using more than one species when assessing metal toxicity or deficiency on a given substrate

  7. Certified and uncertified logging concessions compared in Gabon: changes in stand structure, tree species, and biomass.

    Science.gov (United States)

    Medjibe, V P; Putz, Francis E; Romero, Claudia

    2013-03-01

    Forest management certification is assumed to promote sustainable forest management, but there is little field-based evidence to support this claim. To help fill this gap, we compared a Forest Stewardship Council (FSC)-certified with an adjacent uncertified, conventionally logged concession (CL) in Gabon on the basis of logging damage, above-ground biomass (AGB), and tree species diversity and composition. Before logging, we marked, mapped, and measured all trees >10 cm dbh in 20 and twelve 1-ha permanent plots in the FSC and CL areas, respectively. Soil and tree damage due to felling, skidding, and road-related activities was then assessed 2-3 months after the 508 ha FSC study area and the 200 ha CL study area were selectively logged at respective intensities of 5.7 m(3)/ha (0.39 trees/ha) and 11.4 m(3)/ha (0.76 trees/ha). For each tree felled, averages of 9.1 and 20.9 other trees were damaged in the FSC and CL plots, respectively; when expressed as the impacts per timber volume extracted, the values did not differ between the two treatments. Skid trails covered 2.9 % more of the CL surface, but skid trail length per unit timber volume extracted was not greater. Logging roads were wider in the CL than FSC site and disturbed 4.7 % more of the surface. Overall, logging caused declines in AGB of 7.1 and 13.4 % at the FSC and CL sites, respectively. Changes in tree species composition were small but greater for the CL site. Based on these findings and in light of the pseudoreplicated study design with less-than perfect counterfactual, we cautiously conclude that certification yields environmental benefits even after accounting for differences in logging intensities.

  8. Long-term water stress leads to acclimation of drought sensitivity of photosynthetic capacity in xeric but not riparian Eucalyptus species.

    Science.gov (United States)

    Zhou, Shuang-Xi; Medlyn, Belinda E; Prentice, Iain Colin

    2016-01-01

    Experimental drought is well documented to induce a decline in photosynthetic capacity. However, if given time to acclimate to low water availability, the photosynthetic responses of plants to low soil moisture content may differ from those found in short-term experiments. This study aims to test whether plants acclimate to long-term water stress by modifying the functional relationships between photosynthetic traits and water stress, and whether species of contrasting habitat differ in their degree of acclimation. Three Eucalyptus taxa from xeric and riparian habitats were compared with regard to their gas exchange responses under short- and long-term drought. Photosynthetic parameters were measured after 2 and 4 months of watering treatments, namely field capacity or partial drought. At 4 months, all plants were watered to field capacity, then watering was stopped. Further measurements were made during the subsequent 'drying-down', continuing until stomata were closed. Two months of partial drought consistently reduced assimilation rate, stomatal sensitivity parameters (g1), apparent maximum Rubisco activity (V'(cmax)) and maximum electron transport rate (J'(max)). Eucalyptus occidentalis from the xeric habitat showed the smallest decline in V'(cmax) and J'(max); however, after 4 months, V'(cmax) and J'(max) had recovered. Species differed in their degree of V'(cmax) acclimation. Eucalyptus occidentalis showed significant acclimation of the pre-dawn leaf water potential at which the V'(cmax) and 'true' V(cmax) (accounting for mesophyll conductance) declined most steeply during drying-down. The findings indicate carbon loss under prolonged drought could be over-estimated without accounting for acclimation. In particular, (1) species from contrasting habitats differed in the magnitude of V'(cmax) reduction in short-term drought; (2) long-term drought allowed the possibility of acclimation, such that V'(cmax) reduction was mitigated; (3) xeric species showed a

  9. Assessment of suitability of tree species for the production of biomass on trace element contaminated soils

    International Nuclear Information System (INIS)

    Evangelou, Michael W.H.; Deram, Annabelle; Gogos, Alexander; Studer, Björn; Schulin, Rainer

    2012-01-01

    Highlights: ► Birch: lowest metal concentrations in foliage, wood and bark. ► Bark proportion does not have to decline with increasing age of tree. ► Long harvest rotation (>25 y) reduces metal concentrations in stem. ► Birch: most suitable tree for BCL. - Abstract: To alleviate the demand on fertile agricultural land for production of bioenergy, we investigated the possibility of producing biomass for bioenergy on trace element (TE) contaminated land. Soil samples and plant tissues (leaves, wood and bark) of adult willow (Salix sp.), poplar (Populus sp.), and birch (Betula pendula) trees were collected from five contaminated sites in France and Germany and analysed for Zn, Cd, Pb, Cu, Ca, and K. Cadmium concentration in tree leaves were correlated with tree species, whereas Zn concentration in leaves was site correlated. Birch revealed significantly lower leaf Cd concentrations (1.2–8.9 mg kg −1 ) than willow and poplar (5–80 mg kg −1 ), thus posing the lowest risk for TE contamination of surrounding areas. Birch displayed the lowest bark concentrations for Ca (2300–6200 mg kg −1 ) and K (320–1250 mg kg −1 ), indicating that it would be the most suitable tree species for fuel production, as high concentrations of K and Ca decrease the ash melting point which results in a reduced plant lifetime. Due to higher TE concentrations in bark compared to wood a small bark proportion in relation to the trunk is desirable. In general the bark proportion was reduced with the tree age. In summary, birch was amongst the investigated species the most suitable for biomass production on TE contaminated land.

  10. [Effects of tree species on polysaccharides content of epiphytic Dendrobium officinale].

    Science.gov (United States)

    Guo, Ying-Ying; Zhu, Yan; Si, Jin-Ping; Liu, Jing-Jing; Wu, Cheng-Yong; Li, Hui

    2014-11-01

    To reveals the effects of tree species on polysaccharides content of epiphytic Dendrobium officinale. The polysaccharides content of D. officinale attached to living tress in wild or stumps in bionic-facility was determined by phenol-sulfuric acid method. There were extremely significant differences of polysaccharides content of D. officinale attached to different tree species, but the differences had no relationship with the form and nutrition of barks. The polysaccharides content of D. officinale mainly affected by the light intensity of environment, so reasonable illumination favored the accumulation of polysaccharides. Various polysaccharides content of D. officinal from different attached trees is due to the difference of light regulation, but not the form and nutrition of barks.

  11. Tree species is the major factor explaining C:N ratios in European forest soils

    DEFF Research Database (Denmark)

    Cools, Nathalie; Vesterdal, Lars; De Vos, Bruno

    2014-01-01

    The C:N ratio is considered as an indicator of nitrate leaching in response to high atmospheric nitrogen (N) deposition. However, the C:N ratio is influenced by a multitude of other site-related factors. This study aimed to unravel the factors determining C:N ratios of forest floor, mineral soil...... mineral soil layers it was the humus type. Deposition and climatic variables were of minor importance at the European scale. Further analysis for eight main forest tree species individually, showed that the influence of environmental variables on C:N ratios was tree species dependent. For Aleppo pine...... and peat top soils in more than 4000 plots of the ICP Forests large-scale monitoring network. The first objective was to quantify forest floor, mineral and peat soil C:N ratios across European forests. Secondly we determined the main factors explaining this C:N ratio using a boosted regression tree...

  12. Variation and Genetic Structure in Platanus mexicana (Platanaceae along Riparian Altitudinal Gradient

    Directory of Open Access Journals (Sweden)

    Dulce M. Galván-Hernández

    2015-01-01

    Full Text Available Platanus mexicana is a dominant arboreal species of riparian ecosystems. These ecosystems are associated with altitudinal gradients that can generate genetic differences in the species, especially in the extremes of the distribution. However, studies on the altitudinal effect on genetic variation to riparian species are scarce. In Mexico, the population of P. mexicana along the Colipa River (Veracruz State grows below its reported minimum altitude range, possibly the lowest where this tree grows. This suggests that altitude might be an important factor in population genetics differentiation. We examined the genetic variation and population structuring at four sites with different altitudes (70, 200, 600 and 1700 m a.s.l. using ten inter-simple sequence repeats (ISSR markers. The highest value for Shannon index and Nei’s gene diversity was obtained at 1700 m a.s.l. (He = 0.27, Ne = 1.47, I = 0.42 and polymorphism reached the top value at the middle altitude (% p = 88.57. Analysis of molecular variance (AMOVA and STRUCTURE analysis indicated intrapopulation genetic differentiation. The arithmetic average (UPGMA dendrogram identified 70 m a.s.l. as the most genetically distant site. The genetic structuring resulted from limited gene flow and genetic drift. This is the first report of genetic variation in populations of P. mexicana in Mexico. This research highlights its importance as a dominant species, and its ecological and evolutionary implications in altitudinal gradients of riparian ecosystems.

  13. Physiological Effects of Smoke Exposure on Deciduous and Conifer Tree Species

    International Nuclear Information System (INIS)

    Calder, W.J.; Lifferth, G.; Clair, S.B.S.; Moritz, M.A.

    2010-01-01

    Smoke from forest fires can persist in the environment for weeks and while there is a substantial amount of literature examining the effects of smoke exposure on seed germination, the effects of smoke on leaf function are nearly un investigated. The objective of this study was to compare growth and primary and secondary metabolic responses of deciduous angiosperm and evergreen conifer tree species to short smoke exposure. Twenty minutes of smoke exposure resulted in a greater than 50% reduction in photosynthetic capacity in five of the six species we examined. Impairment of photosynthesis in response to smoke was a function of reductions in stomatal conductance and biochemical limitations. In general, deciduous angiosperm species showed a greater sensitivity than evergreen conifers. While there were significant decreases in photosynthesis and stomatal conductance, smoke had no significant effect on growth or secondary defense compound production in any of the tree species examined.

  14. Soil respiration and rates of soil carbon turnover differ among six common European tree species

    DEFF Research Database (Denmark)

    Vesterdal, Lars; Elberling, Bo; Christiansen, Jesper Riis

    2012-01-01

    replicated at six sites in Denmark. The studied tree species were the broadleaves beech (Fagus sylvatica L.), pedunculate oak (Quercus robur L.), lime (Tilia cordata L.), sycamore maple (Acer pseudoplatanus L.) and ash (Fraxinus excelsior L.) and the conifer Norway spruce (Picea abies (L.) Karst.). Rates....... Soil respiration differed significantly among several species and increased in the order beechmaple... moisture. Carbon turnover rates based on the ratio between R h and C stock were significantly higher in ash than in all other species except maple, and maple also had higher C turnover than spruce. A similar influence of tree species on C turnover was indicated by the litterfall C to forest floor C ratio...

  15. Physiological Effects of Smoke Exposure on Deciduous and Conifer Tree Species

    Directory of Open Access Journals (Sweden)

    W. John Calder

    2010-01-01

    Full Text Available Smoke from forest fires can persist in the environment for weeks and while there is a substantial amount of literature examining the effects of smoke exposure on seed germination, the effects of smoke on leaf function are nearly uninvestigated. The objective of this study was to compare growth and primary and secondary metabolic responses of deciduous angiosperm and evergreen conifer tree species to short smoke exposure. Twenty minutes of smoke exposure resulted in a greater than 50% reduction in photosynthetic capacity in five of the six species we examined. Impairment of photosynthesis in response to smoke was a function of reductions in stomatal conductance and biochemical limitations. In general, deciduous angiosperm species showed a greater sensitivity than evergreen conifers. While there were significant decreases in photosynthesis and stomatal conductance, smoke had no significant effect on growth or secondary defense compound production in any of the tree species examined.

  16. Divergence in strategies for coping with winter embolism among co-occurring temperate tree species: the role of positive xylem pressure, wood type and tree stature

    Science.gov (United States)

    Cun-Yang Niu; Frederick C. Meinzer; Guang-You. Hao

    2017-01-01

    1. In temperate ecosystems, freeze-thaw events are an important environmental stress that can induce severe xylem embolism (i.e. clogging of conduits by air bubbles) in overwintering organs of trees. However, no comparative studies of different adaptive strategies among sympatric tree species for coping with winter embolism have examined the potential role of the...

  17. Spectral mapping of savanna tree species at canopy level, with focus on tall trees, using an integrated CAO Hyperspectral & LiDAR sensor approach

    CSIR Research Space (South Africa)

    Naidoo, L

    2010-03-01

    Full Text Available The detection and mapping of tree/plant species in the savanna ecosystem can provide numerous benefits for the managerial authorities. This includes the accurate mapping of the spatial distribution of economically viable trees which are a key source...

  18. Tree species composition and structure in an old bottomland hardwood forest in south-central Arkansas

    Science.gov (United States)

    Brian Roy Lockhart; James M. Guldin; Thomas Foti

    2010-01-01

    Tree species composition and structure was determined for an old bottomland hardwood forest located in the Moro Creek Bottoms Natural Area in south-central Arkansas. Diversity for this forest was high with species richness ranging from 33 for the overstory and sapling strata to 26 for the seedling stratum and Shannon-Weiner values of 2.54 to 1.02 for the overstory and...

  19. Estimating the global conservation status of more than 15,000 Amazonian tree species

    OpenAIRE

    ter Steege, H.; et al., [Unknown; Duivenvoorden, J.F.

    2015-01-01

    Estimates of extinction risk for Amazonian plant and animal species are rare and not often incorporated into land-use policy and conservation planning. We overlay spatial distribution models with historical and projected deforestation to show that at least 36% and up to 57% of all Amazonian tree species are likely to qualify as globally threatened under International Union for Conservation of Nature (IUCN) Red List criteria. If confirmed, these results would increase the number of threatened ...

  20. Coniochaeta (Lecythophora), Collophora gen. nov. And Phaeomoniella species associated with wood necroses of Prunus trees

    NARCIS (Netherlands)

    Damm, U.; Fourie, P.H.; Crous, P.W.

    2010-01-01

    Species of the genus Coniochaeta (anamorph: Lecythophora) are known as pathogens of woody hosts, but can also cause opportunistic human infections. Several fungi with conidial stages resembling Lecythophora were isolated from necrotic wood samples of Prunus trees in South Africa. In order to reveal

  1. Patterns of tree species diversity and composition in old-field successional forests in central Illinois

    Science.gov (United States)

    Scott M. Bretthauer; George Z. Gertner; Gary L. Rolfe; Jeffery O. Dawson

    2003-01-01

    Tree species diversity increases and dominance decreases with proximity to forest border in two 60-year-old successional forest stands developed on abandoned agricultural land in Piatt County, Illinois. A regression equation allowed us to quantify an increase in diversity with closeness to forest border for one of the forest stands. Shingle oak is the most dominant...

  2. The pristine rain forest? Remnants of historical human impacts on current tree species composition and diversity

    NARCIS (Netherlands)

    Gemerden, van B.S.; Olff, H.; Parren, M.P.E.; Bongers, F.J.J.M.

    2003-01-01

    Aim Tropical rain forests are often regarded as pristine and undisturbed by humans. In Central Africa, community-wide disturbances by natural causes are rare and therefore current theory predicts that natural gap phase dynamics structure tree species composition and diversity. However, the dominant

  3. The pristine rain forest? Remnants of historical human impacts on current tree species composition and diversity

    NARCIS (Netherlands)

    Gemerden, Barend S. van; Olff, Han; Parren, Marc P.E.; Bongers, Frans

    2003-01-01

    Aim: Tropical rain forests are often regarded as pristine and undisturbed by humans. In Central Africa, community-wide disturbances by natural causes are rare and therefore current theory predicts that natural gap phase dynamics structure tree species composition and diversity. However, the dominant

  4. Multiple endmember spectral-angle-mapper (SAM) analysis improves discrimination of Savanna tree species

    CSIR Research Space (South Africa)

    Cho, Moses A

    2009-08-01

    Full Text Available of this paper was to evaluate the classification performance of a multiple-endmember spectral angle mapper (SAM) classification approach in discriminating seven common African savanna tree species and to compare the results with the traditional SAM classifier...

  5. Disturbance Level Determines the Regeneration of Commercial Tree Species in the Eastern Amazon

    NARCIS (Netherlands)

    Schwartz, G.; Lopes, J.C.; Kanashiro, M.; Mohren, G.M.J.; Pena Claros, M.

    2014-01-01

    The effects of reduced-impact logging (RIL) on the regeneration of commercial tree species were investigated, as long-term timber yields depend partly on the availability of seedlings in a managed forest. On four occasions during a 20-month period in the Tapajós National Forest (Eastern Amazon,

  6. Response of seedlings of different tree species to elevated C02 in Changbai Mountain

    Institute of Scientific and Technical Information of China (English)

    DAILi-min; JILan-zhu; WANGMiao; LIQiu-rong

    2003-01-01

    Eco-physiological responses of seedlings of eight species, Pinus koraiensis, Picea koraiensis, Lanx olgensis,Populus ussuriensis, Betula platyphylla, Tilia amurensis, Traxinus mandshurica and Acer mono from broadleaved/Korean pine forest, to elevated CO2 were studied by using open-top chambers under natural sunlight in Changbai Mountain, China in two growing seasons (1998-1999). Two concentrations of CO2 were designed: elevated CO2 (700 pmol· mol-1) and ambient CO2 (400μmol· mol-1). The study results showed that the height growth of the tree seedlings grown at elevated CO2 increased by about 10%-40% compared to those grown at ambient CO2. And the water using efficiency of seedlings also followed the same tendency. However, the responses of seedlings in transpiration and chlorophyll content to elevated CO2 varied with tree species.The broad-leaf tree species were more sensitive to the elevated CO2than conifer tree species. All seedlings showed a photo-synthetic acclimation to Iong-term elevated CO2.

  7. Functional traits, drought performance, and the distribution of tree species in tropical forests of Ghana

    NARCIS (Netherlands)

    Amissah, L.

    2014-01-01

    Tropical forests occur along a rainfall gradient where annual amount, the length and intensity of dry season vary and water availability shapes therefore strongly the distribution of tree species. Annual rainfall in West Africa has declined at a rate of 4% per decade, and climate change

  8. Using AVIRIS data and multiple-masking techniques to map urban forest trees species

    Science.gov (United States)

    Q. Xiao; S.L. Ustin; E.G. McPherson

    2004-01-01

    Tree type and species information are critical parameters for urban forest management, benefit cost analysis and urban planning. However, traditionally, these parameters have been derived based on limited field samples in urban forest management practice. In this study we used high-resolution Airborne Visible Infrared Imaging Spectrometer (AVIRIS) data and multiple-...

  9. Intraspecific Variation in Armillaria Species from Shrubs and Trees in Northwestern Spain

    Directory of Open Access Journals (Sweden)

    O. Aguín

    2004-08-01

    Full Text Available Until recently, the identification of Armillaria species relied upon morphological characteristics and mating tests, but now molecular techniques based on polymorphisms in the IGS region of the fungal rDNA are more commonly used, since these are more rapid and reliable. Differences found in RFLP patterns identifying Armillaria species have suggested the existence of intraspecific variation. In this work, 185 Armillaria isolates from different plant species (including fruit trees, broadleaf and coniferous trees, ornamental shrubs, kiwifruit and grapevine affected by white root rot were analyzed by RFLP-PCR, in order to study intraspecific variation in Armillaria and the relationship with the plant host. Armillaria mellea was found in the majority of samples (71%, and was the most frequent Armillaria species in symptomatic ornamental shrubs, kiwifruit, grapevine, fruit trees and broadleaf trees. In conifers however white root rot was generally caused by Armillaria ostoyae. Armillaria gallica was identified, although with low incidence, in ornamental, coniferous, broadleaf and fruit hosts. Intraspecies variation was recorded only in A. mellea, for which RFLP patterns mel 1 and mel 2 were found. Most plants infected with A. mellea showed the mel 2 pattern. Further research is needed to study whether Armillaria RFLP patterns are specific to certain plant hosts, and whether intraspecific variation is related to differences in pathogenicity.

  10. An object-oriented forest landscape model and its representation of tree species

    Science.gov (United States)

    Hong S. He; David J. Mladenoff; Joel Boeder

    1999-01-01

    LANDIS is a forest landscape model that simulates the interaction of large landscape processes and forest successional dynamics at tree species level. We discuss how object-oriented design (OOD) approaches such as modularity, abstraction and encapsulation are integrated into the design of LANDIS. We show that using OOD approaches, model decisions (olden as model...

  11. Morphological Characterization of African Bush Mango trees (Irvingia species) in the Dahomey Gap (West Africa)

    NARCIS (Netherlands)

    Vihotogbe, R.; Berg, van den R.G.; Sosef, M.S.M.

    2013-01-01

    The variation of the morphological characters of bitter and sweet African bush mango trees (Irvingia species) was investigated in the Dahomey Gap which is the West African savannah woodland area separating the Upper and the Lower Guinean rain forest blocks. African bush mangoes have been rated as

  12. Invasion by native tree species prevents biotic homogenization in novel forests of Puerto Rico

    Science.gov (United States)

    Oscar J. Abelleira Martinez

    2010-01-01

    There is concern that secondary forests dominated by introduced species, known as novel forests, increase taxonomical similarity between localities and lead to biotic homogenization in human dominated landscapes. In Puerto Rico, agricultural abandonment has given way to novel forests dominated by the introduced African tulip tree Spathodea campanulata Beauv. (...

  13. Co-occurring species differ in tree-ring δ18O trends.

    Science.gov (United States)

    John D. Marshall; Robert A. Monserud

    2006-01-01

    The stable oxygen isotope ratio (δ18O) of tree-ring cellulose is jointly determined by the δ18O of xylem water, the δ18O of atmospheric water vapor, the humidity of the atmosphere and perhaps by species-specific differences in leaf structure and function. Atmospheric...

  14. Surface tension phenomena in the xylem sap of three diffuse porous temperate tree species

    Science.gov (United States)

    K. K. Christensen-Dalsgaard; M. T. Tyree; P. G. Mussone

    2011-01-01

    In plant physiology models involving bubble nucleation, expansion or elimination, it is typically assumed that the surface tension of xylem sap is equal to that of pure water, though this has never been tested. In this study we collected xylem sap from branches of the tree species Populus tremuloides, Betula papyrifera and Sorbus...

  15. No evidence that boron influences tree species distributions in lowland tropical forests of Panama.

    Science.gov (United States)

    Turner, Benjamin L; Zalamea, Paul-Camilo; Condit, Richard; Winter, Klaus; Wright, S Joseph; Dalling, James W

    2017-04-01

    It was recently proposed that boron might be the most important nutrient structuring tree species distributions in tropical forests. Here we combine observational and experimental studies to test this hypothesis for lowland tropical forests of Panama. Plant-available boron is uniformly low in tropical forest soils of Panama and is not significantly associated with any of the > 500 species in a regional network of forest dynamics plots. Experimental manipulation of boron supply to seedlings of three tropical tree species revealed no evidence of boron deficiency or toxicity at concentrations likely to occur in tropical forest soils. Foliar boron did not correlate with soil boron along a local scale gradient of boron availability. Fifteen years of boron addition to a tropical forest increased plant-available boron by 70% but did not significantly change tree productivity or boron concentrations in live leaves, wood or leaf litter. The annual input of boron in rainfall accounts for a considerable proportion of the boron in annual litterfall and is similar to the pool of plant-available boron in the soil, and is therefore sufficient to preclude boron deficiency. We conclude that boron does not influence tree species distributions in Panama and presumably elsewhere in the lowland tropics. No claim to original US government works New Phytologist © 2016 New Phytologist Trust.

  16. Long-Term Effects of Exotic Tree Species ( Tectona grandis Linn. F ...

    African Journals Online (AJOL)

    Long-Term Effects of Exotic Tree Species ( Tectona grandis Linn. F.) on the Status of Extractable Micronutrients in the ... The study therefore implied that Tectona grandis has an extractive property on micronutrient particularly on soils that are low in these nutrients. Nigerian Journal of Soil and Environmental Research Vol.

  17. New flux based dose-response relationships for ozone for European forest tree species.

    Science.gov (United States)

    Büker, P; Feng, Z; Uddling, J; Briolat, A; Alonso, R; Braun, S; Elvira, S; Gerosa, G; Karlsson, P E; Le Thiec, D; Marzuoli, R; Mills, G; Oksanen, E; Wieser, G; Wilkinson, M; Emberson, L D

    2015-11-01

    To derive O3 dose-response relationships (DRR) for five European forest trees species and broadleaf deciduous and needleleaf tree plant functional types (PFTs), phytotoxic O3 doses (PODy) were related to biomass reductions. PODy was calculated using a stomatal flux model with a range of cut-off thresholds (y) indicative of varying detoxification capacities. Linear regression analysis showed that DRR for PFT and individual tree species differed in their robustness. A simplified parameterisation of the flux model was tested and showed that for most non-Mediterranean tree species, this simplified model led to similarly robust DRR as compared to a species- and climate region-specific parameterisation. Experimentally induced soil water stress was not found to substantially reduce PODy, mainly due to the short duration of soil water stress periods. This study validates the stomatal O3 flux concept and represents a step forward in predicting O3 damage to forests in a spatially and temporally varying climate. Crown Copyright © 2015. Published by Elsevier Ltd. All rights reserved.

  18. Seed germination methods for native Caribbean trees and shrubs : with emphasis on species relevant for Bonaire

    NARCIS (Netherlands)

    Burg, van der W.J.; Freitas, J.; Debrot, A.O.

    2014-01-01

    This paper is intended as a basis for nature restoration activities using seeds of trees and (larger) shrubs native to Bonaire with the aim of reforestation. It describes the main seed biology issues relevant for species from this region, to facilitate decisions on time and stage of harvesting, safe

  19. Diversity, stand characteristics and spatial aggregation of tree species in a Bangladesh forest ecosystem

    DEFF Research Database (Denmark)

    Uddin, Mohammad B.; Steinbauer, Manuel; Beierkuhnlein, Carl

    2011-01-01

    in similarity of tree species composition with geographical distance. The distance-decay was assessed separately for the whole study area and for two subsamples from Satchari National Park and Satchari Reserve Forest. Satchari National Park (strictly protected) had, despite its smaller area, a higher Alpha...

  20. Effects of sample survey design on the accuracy of classification tree models in species distribution models

    Science.gov (United States)

    Thomas C. Edwards; D. Richard Cutler; Niklaus E. Zimmermann; Linda Geiser; Gretchen G. Moisen

    2006-01-01

    We evaluated the effects of probabilistic (hereafter DESIGN) and non-probabilistic (PURPOSIVE) sample surveys on resultant classification tree models for predicting the presence of four lichen species in the Pacific Northwest, USA. Models derived from both survey forms were assessed using an independent data set (EVALUATION). Measures of accuracy as gauged by...

  1. Effects of groundwater abstraction on two keystone tree species in an arid savanna national park.

    Science.gov (United States)

    Shadwell, Eleanor; February, Edmund

    2017-01-01

    In arid systems with no surface water, deep boreholes in ephemeral river beds provide for humans and animals. With continually increasing infrastructure development for tourism in arid wildlife parks such as the Kgalagadi Transfrontier Park in southern Africa, we ask what effects increased abstraction may have on large trees. Large trees in arid savannas perform essential ecosystem services by providing food, shade, nesting sites and increased nutrients for many other plant and animal species and for this are regarded as keystone species. We determine seasonal fluctuations in the water table while also determining the water source for the dominant large tree species in the Auob and Nossob rivers in the Park. We also determine the extent to which these trees are physiologically stressed using leaf δ 13 C, xylem pressure potentials, specific leaf area and an estimate of canopy death. We do this both upstream and downstream of a low water use borehole in the Auob River and a high water use borehole in the Nossob River. Our results show that the trees are indeed using deep groundwater in the wet season and that this is the same water used by people. In the dry season, trees in the Auob downstream of the active borehole become detached from the aquifer and use more isotopically enriched soil water. In the Nossob in the dry season, all trees use isotopically enriched soil water, and downstream of the active borehole use stomatal regulation to maintain leaf water potentials. These results suggest that trees in the more heavily utilised Nossob are under more water stress than those trees in the Auob but that trees in both rivers demonstrate physiological adaptation to the changes in available water with smaller heavier leaves, no significant canopy dieback and in the dry season in the Nossob stomatal regulation of leaf water potentials. An increase in abstraction of groundwater particularly at the Nossob borehole may cause an additional draw down of the water table adding

  2. Effects of groundwater abstraction on two keystone tree species in an arid savanna national park

    Directory of Open Access Journals (Sweden)

    Eleanor Shadwell

    2017-01-01

    Full Text Available Background In arid systems with no surface water, deep boreholes in ephemeral river beds provide for humans and animals. With continually increasing infrastructure development for tourism in arid wildlife parks such as the Kgalagadi Transfrontier Park in southern Africa, we ask what effects increased abstraction may have on large trees. Large trees in arid savannas perform essential ecosystem services by providing food, shade, nesting sites and increased nutrients for many other plant and animal species and for this are regarded as keystone species. Methods We determine seasonal fluctuations in the water table while also determining the water source for the dominant large tree species in the Auob and Nossob rivers in the Park. We also determine the extent to which these trees are physiologically stressed using leaf δ13C, xylem pressure potentials, specific leaf area and an estimate of canopy death. We do this both upstream and downstream of a low water use borehole in the Auob River and a high water use borehole in the Nossob River. Results Our results show that the trees are indeed using deep groundwater in the wet season and that this is the same water used by people. In the dry season, trees in the Auob downstream of the active borehole become detached from the aquifer and use more isotopically enriched soil water. In the Nossob in the dry season, all trees use isotopically enriched soil water, and downstream of the active borehole use stomatal regulation to maintain leaf water potentials. These results suggest that trees in the more heavily utilised Nossob are under more water stress than those trees in the Auob but that trees in both rivers demonstrate physiological adaptation to the changes in available water with smaller heavier leaves, no significant canopy dieback and in the dry season in the Nossob stomatal regulation of leaf water potentials. Discussion An increase in abstraction of groundwater particularly at the Nossob borehole may

  3. Recruitment dynamics mediated by ungulate herbivory can affect species coexistence for tree seedling assemblages

    Directory of Open Access Journals (Sweden)

    Chi-Yu Weng

    2017-08-01

    Full Text Available The best-known mechanism that herbivory affects species coexistence of tree seedlings is negative density-dependency driven by specialist natural enemies. However, in a forest with intense herbivory by non-specialists, what causes a diversifying seedling bank if rare species do not benefit from negative density-dependency in dominant species? We hypothesize that generalist herbivores can cause unevenly distributed species-specific mortality, which mediates recruitment dynamics and therefore affects species coexistence. To answer this question, we conducted a fence-control experiment in a montane cloud forest, Taiwan, and found that herbivorous damages were mainly caused by ungulates, which are generalists. We explored ungulate herbivory effects on recruitment dynamics by censusing tree seedling dynamics for three years. We found that herbivorous damages by ungulates significantly cause seedling death, mostly at their early stage of establishment. The percentage of death caused by herbivory varied among species. In particular, nurse plants and seedling initial height help shade-tolerant species to persist under such intense herbivory. Whereas, deaths caused by other factors occurred more often in older seedlings, with a consistent low percentage among species. We then tested species coexistence maintenance by dynamic modelling under different scenarios of ungulate herbivory. Raising percentages of death by herbivory changes relative species abundances by suppressing light-demanding species and increasing shade-tolerant species. Density-dependent mortality immediately after bursts of recruitments can suppress dominance of abundant species. With ungulate herbivory, fluctuating recruitment further prevent rare species from apparent competition induced by abundant species. Such bio-processes can interact with ungulate herbivory so that long-term coexistence can be facilitated.

  4. Are cicadas (Diceroprocta apache) both a "keystone" and a "critical-link" species in lower Colorado River riparian communities?

    Science.gov (United States)

    Andersen, Douglas C.

    1994-01-01

    Apache cicada (Homoptera: Cicadidae: Diceroprocta apache Davis) densities were estimated to be 10 individuals/m2 within a closed-canopy stand of Fremont cottonwood (Populus fremontii) and Goodding willow (Salix gooddingii) in a revegetated site adjacent to the Colorado River near Parker, Arizona. Coupled with data drawn from the literature, I estimate that up to 1.3 cm (13 1/m2) of water may be added to the upper soil layers annually through the feeding activities of cicada nymphs. This is equivalent to 12% of the annual precipitation received in the study area. Apache cicadas may have significant effects on ecosystem functioning via effects on water transport and thus act as a critical-link species in this southwest desert riverine ecosystem. Cicadas emerged later within the cottonwood-willow stand than in relatively open saltcedar-mesquite stands; this difference in temporal dynamics would affect their availability to several insectivorous bird species and may help explain the birds' recent declines. Resource managers in this region should be sensitive to the multiple and strong effects that Apache cicadas may have on ecosystem structure and functioning.

  5. Effect of temperate climate tree species on gross ammonification, gross nitrification and N2O formation

    Science.gov (United States)

    Brüggemann, N.; Rosenkranz, P.; Papen, H.; Butterbach-Bahl, K.

    2003-04-01

    Microbial nitrogen turnover processes in the soil, like ammonification, nitrification and denitrification, play an important role in the formation of nitrous oxide (N2O): (i) ammonification, because it releases nitrogen from organic material in the form of ammonium (NH4+), which in turn can serve as substrate for nitrification; (ii) nitrification itself (i.e. the turnover of NH4+ to nitrate, NO3-), during which nitric oxide (NO) and N2O can be released as by-products at varying ratios; (iii) denitrification, in which NO3- serves as electron acceptor and is converted to molecular nitrogen (N2) via NO and N2O as intermediates, that can also be partially lost to the atmosphere. Temperate forest soils are a substantial source of atmospheric N2O contributing up to 10% to the total atmospheric N2O budget. However, this figure is afflicted with a huge uncertainty due to a number of factors governing the soil N2O formation, consumption, release and uptake, which are not fully understood at present. To one of these factors belongs the influence of the tree species on nitrogen turnover processes in the soil and the formation of N trace gases related with them. The aim of the present work was to analyse this tree species effect for the temperate climate region. For this purpose the effect of five different temperate tree species, having the same age and growing on the same soil in direct vicinity to each other, on gross ammonification and gross nitrification as well as on N2O formation was investigated. The trees (common beech, Fagus sylvatica; pedunculate oak, Quercus robur; Norway spruce, Picea abies; Japanese larch, Larix leptolepis; mountain pine, Pinus mugo) were part of a species trial in Western Jutland, Denmark, established in 1965 on a former sandy heathland. Samples from the soil under these five tree species were taken in spring and in summer 2002, respectively, differentiating between organic layer and mineral soil. The gross rates of ammonification as well of

  6. Winning and losing tree species of reassembly in Minnesota's mixed and broadleaf forests.

    Directory of Open Access Journals (Sweden)

    Brice B Hanberry

    Full Text Available We examined reassembly of winning and losing tree species, species traits including shade and fire tolerance, and associated disturbance filters and forest ecosystem types due to rapid forest change in the Great Lakes region since 1850. We identified winning and losing species by changes in composition, distribution, and site factors between historical and current surveys in Minnesota's mixed and broadleaf forests. In the Laurentian Mixed Forest, shade-intolerant aspen replaced shade-intolerant tamarack as the most dominant tree species. Fire-tolerant white pine and jack pine decreased, whereas shade-tolerant ashes, maples, and white cedar increased. In the Eastern Broadleaf Forest, fire-tolerant white oaks and red oaks decreased, while shade-tolerant ashes, American basswood, and maples increased. Tamarack, pines, and oaks have become restricted to sites with either wetter or sandier and drier soils due to increases in aspen and shade-tolerant, fire-sensitive species on mesic sites. The proportion of shade-tolerant species increased in both regions, but selective harvest reduced the applicability of functional groups alone to specify winners and losers. Harvest and existing forestry practices supported aspen dominance in mixed forests, although without aspen forestry and with fire suppression, mixed forests will transition to a greater composition of shade-tolerant species, converging to forests similar to broadleaf forests. A functional group framework provided a perspective of winning and losing species and traits, selective filters, and forest ecosystems that can be generalized to other regions, regardless of species identity.

  7. Winning and Losing Tree Species of Reassembly in Minnesota’s Mixed and Broadleaf Forests

    Science.gov (United States)

    Hanberry, Brice B.; Palik, Brian J.; He, Hong S.

    2013-01-01

    We examined reassembly of winning and losing tree species, species traits including shade and fire tolerance, and associated disturbance filters and forest ecosystem types due to rapid forest change in the Great Lakes region since 1850. We identified winning and losing species by changes in composition, distribution, and site factors between historical and current surveys in Minnesota’s mixed and broadleaf forests. In the Laurentian Mixed Forest, shade-intolerant aspen replaced shade-intolerant tamarack as the most dominant tree species. Fire-tolerant white pine and jack pine decreased, whereas shade-tolerant ashes, maples, and white cedar increased. In the Eastern Broadleaf Forest, fire-tolerant white oaks and red oaks decreased, while shade-tolerant ashes, American basswood, and maples increased. Tamarack, pines, and oaks have become restricted to sites with either wetter or sandier and drier soils due to increases in aspen and shade-tolerant, fire-sensitive species on mesic sites. The proportion of shade-tolerant species increased in both regions, but selective harvest reduced the applicability of functional groups alone to specify winners and losers. Harvest and existing forestry practices supported aspen dominance in mixed forests, although without aspen forestry and with fire suppression, mixed forests will transition to a greater composition of shade-tolerant species, converging to forests similar to broadleaf forests. A functional group framework provided a perspective of winning and losing species and traits, selective filters, and forest ecosystems that can be generalized to other regions, regardless of species identity. PMID:23613911

  8. Winning and losing tree species of reassembly in Minnesota's mixed and broadleaf forests.

    Science.gov (United States)

    Hanberry, Brice B; Palik, Brian J; He, Hong S

    2013-01-01

    We examined reassembly of winning and losing tree species, species traits including shade and fire tolerance, and associated disturbance filters and forest ecosystem types due to rapid forest change in the Great Lakes region since 1850. We identified winning and losing species by changes in composition, distribution, and site factors between historical and current surveys in Minnesota's mixed and broadleaf forests. In the Laurentian Mixed Forest, shade-intolerant aspen replaced shade-intolerant tamarack as the most dominant tree species. Fire-tolerant white pine and jack pine decreased, whereas shade-tolerant ashes, maples, and white cedar increased. In the Eastern Broadleaf Forest, fire-tolerant white oaks and red oaks decreased, while shade-tolerant ashes, American basswood, and maples increased. Tamarack, pines, and oaks have become restricted to sites with either wetter or sandier and drier soils due to increases in aspen and shade-tolerant, fire-sensitive species on mesic sites. The proportion of shade-tolerant species increased in both regions, but selective harvest reduced the applicability of functional groups alone to specify winners and losers. Harvest and existing forestry practices supported aspen dominance in mixed forests, although without aspen forestry and with fire suppression, mixed forests will transition to a greater composition of shade-tolerant species, converging to forests similar to broadleaf forests. A functional group framework provided a perspective of winning and losing species and traits, selective filters, and forest ecosystems that can be generalized to other regions, regardless of species identity.

  9. Modeling the effects of tree species and incubation temperature on soil's extracellular enzyme activity in 78-year-old tree plantations

    Science.gov (United States)

    Zhou, Xiaoqi; Wang, Shen S. J.; Chen, Chengrong

    2017-12-01

    Forest plantations have been widely used as an effective measure for increasing soil carbon (C), and nitrogen (N) stocks and soil enzyme activities play a key role in soil C and N losses during decomposition of soil organic matter. However, few studies have been carried out to elucidate the mechanisms behind the differences in soil C and N cycling by different tree species in response to climate warming. Here, we measured the responses of soil's extracellular enzyme activity (EEA) to a gradient of temperatures using incubation methods in 78-year-old forest plantations with different tree species. Based on a soil enzyme kinetics model, we established a new statistical model to investigate the effects of temperature and tree species on soil EEA. In addition, we established a tree species-enzyme-C/N model to investigate how temperature and tree species influence soil C/N contents over time without considering plant C inputs. These extracellular enzymes included C acquisition enzymes (β-glucosidase, BG), N acquisition enzymes (N-acetylglucosaminidase, NAG; leucine aminopeptidase, LAP) and phosphorus acquisition enzymes (acid phosphatases). The results showed that incubation temperature and tree species significantly influenced all soil EEA and Eucalyptus had 1.01-2.86 times higher soil EEA than coniferous tree species. Modeling showed that Eucalyptus had larger soil C losses but had 0.99-2.38 times longer soil C residence time than the coniferous tree species over time. The differences in the residual soil C and N contents between Eucalyptus and coniferous tree species, as well as between slash pine (Pinus elliottii Engelm. var. elliottii) and hoop pine (Araucaria cunninghamii Ait.), increase with time. On the other hand, the modeling results help explain why exotic slash pine can grow faster, as it has 1.22-1.38 times longer residual soil N residence time for LAP, which mediate soil N cycling in the long term, than native coniferous tree species like hoop pine and

  10. Growth of four tropical tree species in petroleum-contaminated soil and effects of crude oil contamination

    NARCIS (Netherlands)

    Pérez-Hernández, I.; Ochoa-Gaona, S.; Adams, R.H.; Rivera-Cruz, M.C.; Pérez-Hernández, V.; Jarquín-Sánchez, A.; Geissen, V.; Martínez-Zurimendi, P.

    2017-01-01

    Under greenhouse conditions, we evaluated establishment of four tree species and their capacity to degrade crude oil recently incorporated into the soil; the species were as follows: Cedrela odorata (tropical cedar), Haematoxylum campechianum (tinto bush), Swietenia macrophylla (mahogany), and

  11. Fruit availability, frugivore satiation and seed removal in 2 primate-dispersed tree species.

    Science.gov (United States)

    Ratiarison, Sandra; Forget, Pierre-Michel

    2011-09-01

    During a mast-fruiting event we investigated spatial variability in fruit availability, consumption, and seed removal at two sympatric tree species, Manilkara bidentata and M. huberi (Sapotaceae) at Nouragues Natural Reserve, French Guiana. We addressed the question of how Manilkara density and fruits at the community level might be major causes of variability in feeding assemblages between tree species. We thus explored how the frugivore assemblages differed between forest patches with contrasting relative Manilkara density and fruiting context. During the daytime, Alouatta seniculus was more often observed in M. huberi crowns at Petit Plateau (PP) with the greatest density of Manilkara spp. and the lowest fruit diversity and availability, whereas Cebus apella and Saguinus midas were more often observed in M. bidentata crowns at both Grand Plateau (GP), with a lowest density of M. bidentata and overall greater fruit supply, and PP. Overall, nearly 53% and 15% of the M. bidentata seed crop at GP and PP, respectively, and about 47% of the M. huberi seed crop were removed, otherwise either spit out or defecated beneath trees, or dropped in fruits. Small-bodied primates concentrated fallen seeds beneath parent trees while large-bodied primate species removed and dispersed more seeds away from parents. However, among the latter, satiated A. seniculus wasted seeds under conspecific trees at PP. Variations in feeding assemblages, seed removal rates and fates possibly reflected interactions with extra-generic fruit species at the community level, according to feeding choice, habitat preferences and ranging patterns of primate species. © 2011 ISZS, Blackwell Publishing and IOZ/CAS.

  12. Isolation and molecular characterization of Cryptococcus species isolated from pigeon nests and Eucalyptus trees.

    Science.gov (United States)

    Kamari, A; Sepahvand, A; Mohammadi, R

    2017-06-01

    Cryptococcus species are pathogenic and non-pathogenic basidiomycete yeasts that are found widely in the environment. Based on phenotypic methods, this genus has many species; however, its taxonomy is presently being re-evaluated by modern techniques. The Cryptococcus species complex includes two sibling taxa of Cryptococcus neoformans and Cryptococcus gattii . We aimed to investigate the possible distribution of Cryptococcus species in pigeon nests and Eucalyptus trees in Ilam, Iran, using molecular techniques. Two hundred and seventy-four specimens were collected from pigeon nests and Eucalyptus trees during 2016-2017. All the specimens were sub-cultured on Sabouraud Glucose Agar with chloramphenicol and bird seed agar. For molecular identification, the ITS15.8SITS2 rDNA region was amplified using the first and fourth internal transcribed spacer (ITS1 and ITS4, respectively) primers. The purified products were applied for cycle sequencing reactions in forward direction with ITS1 primer. The obtained results were analyzed with Chromas 2.3. Thirty-three out of 186 cultures (17.7%) and 11 out of 88 cultures (12.5%) were positive among pigeon nest and Eucalyptus tree specimens, respectively. Cryptococcus albidus (17.2%), C. albidus var. kuetzingii (3.4%), C. adeliensis (3.4%), C. uzbekistanensis (3.4%), and C. neoformans var. grubii (3.4%) were isolated from pigeon nests, and Cryptococcus adeliensis (25%) was the only Cryptococcus species isolated from Eucalyptus trees. The presence of pigeons and Eucalyptus trees in the vicinity of some particular places such as rest homes and hospitals should be considered as a risk factor for the immunocompromised population.

  13. Tree species diversity mitigates disturbance impacts on the forest carbon cycle.

    Science.gov (United States)

    Silva Pedro, Mariana; Rammer, Werner; Seidl, Rupert

    2015-03-01

    Biodiversity fosters the functioning and stability of forest ecosystems and, consequently, the provision of crucial ecosystem services that support human well-being and quality of life. In particular, it has been suggested that tree species diversity buffers ecosystems against the impacts of disturbances, a relationship known as the "insurance hypothesis". Natural disturbances have increased across Europe in recent decades and climate change is expected to amplify the frequency and severity of disturbance events. In this context, mitigating disturbance impacts and increasing the resilience of forest ecosystems is of growing importance. We have tested how tree species diversity modulates the impact of disturbance on net primary production and the total carbon stored in living biomass for a temperate forest landscape in Central Europe. Using the simulation model iLand to study the effect of different disturbance regimes on landscapes with varying levels of tree species richness, we found that increasing diversity generally reduces the disturbance impact on carbon storage and uptake, but that this effect weakens or even reverses with successional development. Our simulations indicate a clear positive relationship between diversity and resilience, with more diverse systems experiencing lower disturbance-induced variability in their trajectories of ecosystem functioning. We found that positive effects of tree species diversity are mainly driven by an increase in functional diversity and a modulation of traits related to recolonization and resource usage. The results of our study suggest that increasing tree species diversity could mitigate the effects of intensifying disturbance regimes on ecosystem functioning and improve the robustness of forest carbon storage and the role of forests in climate change mitigation.

  14. Impacts of the Brown Tree Snake: Patterns of Decline and Species Persistence in Guam's Avifauna

    Science.gov (United States)

    Wiles, G.J.; Bart, J.; Beck, R.E.; Aguon, C.F.

    2003-01-01

    Predation by brown tree snakes (Boiga irregularis ) devastated the avifauna of Guam in the Mariana Islands during the last half of the twentieth century, causing the extirpation or serious reduction of most of the island's 25 resident bird species. Past studies have provided qualitative descriptions of the decline of native forest birds but have not considered all species or presented quantitative analyses. We analyzed two sets of survey data gathered in northern Guam between 1976 and 1998 and reviewed unpublished sources to provide a comprehensive account of the impact of brown tree snakes on the island's birds. Our results indicate that 22 species, including 17 of 18 native species, were severely affected by snakes. Twelve species were likely extirpated as breeding residents on the main island, 8 others experienced declines of ≥90% throughout the island or at least in the north, and 2 were kept at reduced population levels during all or much of the study. Declines of ≥90% occurred rapidly, averaging just 8.9 years along three roadside survey routes combined and 1.6 years at a 100-ha forested study site. Declines in northern Guam were also relatively synchronous and occurred from about 1976 to 1986 for most species. The most important factor predisposing a species to coexistence with brown tree snakes was its ability to nest and roost at locations where snakes were uncommon. Large clutch size and large body size were also related to longer persistence times, although large body size appeared to delay, but not prevent, extirpation. Our results draw attention to the enormous detrimental impact that brown tree snakes are likely to have upon invading new areas. Increased containment efforts on Guam are needed to prevent further colonizations, but a variety of additional management efforts would also benefit the island's remaining bird populations.

  15. The trait contribution to wood decomposition rates of 15 Neotropical tree species.

    Science.gov (United States)

    van Geffen, Koert G; Poorter, Lourens; Sass-Klaassen, Ute; van Logtestijn, Richard S P; Cornelissen, Johannes H C

    2010-12-01

    The decomposition of dead wood is a critical uncertainty in models of the global carbon cycle. Despite this, relatively few studies have focused on dead wood decomposition, with a strong bias to higher latitudes. Especially the effect of interspecific variation in species traits on differences in wood decomposition rates remains unknown. In order to fill these gaps, we applied a novel method to study long-term wood decomposition of 15 tree species in a Bolivian semi-evergreen tropical moist forest. We hypothesized that interspecific differences in species traits are important drivers of variation in wood decomposition rates. Wood decomposition rates (fractional mass loss) varied between 0.01 and 0.31 yr(-1). We measured 10 different chemical, anatomical, and morphological traits for all species. The species' average traits were useful predictors of wood decomposition rates, particularly the average diameter (dbh) of the tree species (R2 = 0.41). Lignin concentration further increased the proportion of explained inter-specific variation in wood decomposition (both negative relations, cumulative R2 = 0.55), although it did not significantly explain variation in wood decomposition rates if considered alone. When dbh values of the actual dead trees sampled for decomposition rate determination were used as a predictor variable, the final model (including dead tree dbh and lignin concentration) explained even more variation in wood decomposition rates (R2 = 0.71), underlining the importance of dbh in wood decomposition. Other traits, including wood density, wood anatomical traits, macronutrient concentrations, and the amount of phenolic extractives could not significantly explain the variation in wood decomposition rates. The surprising results of this multi-species study, in which for the first time a large set of traits is explicitly linked to wood decomposition rates, merits further testing in other forest ecosystems.

  16. Genetic effects of air pollution on forest tree species of the Carpathian Mountains

    International Nuclear Information System (INIS)

    Longauer, Roman; Goemoery, Dusan; Paule, Ladislav; Blada, Ioan; Popescu, Flaviu; Mankovska, Blanka; Mueller-Starck, Gerhard; Schubert, Roland; Percy, Kevin; Szaro, Robert C.; Karnosky, David F.

    2004-01-01

    The effects of air pollution on the genetic structure of Norway spruce, European silver fir and European beech were studied at four polluted sites in Slovakia, Romania and Czech Republic. In order to reduce potential effects of site heterogeneity on the health condition, pair-wise sampling of pollution-tolerant and sensitive trees was applied. Genotypes of sampled trees were determined at 21 isozyme gene loci of spruce, 18 loci of fir and 15 loci of beech. In comparison with Norway spruce, fewer genetic differences were revealed in beech and almost no differentiation between pollution-tolerant and sensitive trees was observed in fir. In adult stands of Norway spruce, sensitive trees exhibited higher genetic multiplicity and diversity. The decline of pollution-sensitive trees may result thus in a gradual genetic depletion of pollution-exposed populations of Norway spruce through the loss of less frequent alleles with potential adaptive significance to altered stressing regimes in the future. Comparison of the subsets of sensitive and tolerant Norway spruce individuals as determined by presence or absence of discolorations (''spruce yellowing'') revealed different heterozygosity at 3 out of 11 polymorphic loci. - Genetic effects of air pollution on main forest trees of the Carpathians are species- and site-specific

  17. Trees

    Science.gov (United States)

    Al-Khaja, Nawal

    2007-01-01

    This is a thematic lesson plan for young learners about palm trees and the importance of taking care of them. The two part lesson teaches listening, reading and speaking skills. The lesson includes parts of a tree; the modal auxiliary, can; dialogues and a role play activity.

  18. Project CAPTURE: a U.S. national prioritization assessment of tree species for conservation, management, and restoration

    Science.gov (United States)

    Kevin M. Potter; Barbara S. Crane; Valerie D. Hipkins

    2017-01-01

    that forest tree species will undergo population-level extirpation or species-level extinction during the next century. Project CAPTURE (Conservation Assessment and Prioritization of Forest Trees Under Risk of Extirpation) is a cooperative effort across the three U.S. Department of Agriculture Forest Service (USDA FS) deputy areas to establish a framework for...

  19. Project CAPTURE: using forest inventory and analysis data to prioritize tree species for conservation, management, and restoration

    Science.gov (United States)

    Kevin M. Potter; Barbara S. Crane; William W. Hargrove

    2015-01-01

    A variety of threats, most importantly climate change and insect and disease infestation, will increase the likelihood that forest tree species could experience population-level extirpation or species-level extinction during the next century. Project CAPTURE (Conservation Assessment and Prioritization of Forest Trees Under Risk of Extirpation) is a cooperative effort...

  20. The effect of organic acids on base cation leaching from the forest floor under six North American tree species

    NARCIS (Netherlands)

    Dijkstra, F.A.; Geibe, C.; Holmstrom, S.; Lundstrom, U.S.; Breemen, van N.

    2001-01-01

    Organic acidity and its degree of neutralization in the forest floor can have large consequences for base cation leaching under different tree species. We investigated the effect of organic acids on base cation leaching from the forest floor under six common North American tree species. Forest floor

  1. Modeling the effects of tree species and incubation temperature on soil's extracellular enzyme activity in 78-year-old tree plantations

    Directory of Open Access Journals (Sweden)

    X. Zhou

    2017-12-01

    Full Text Available Forest plantations have been widely used as an effective measure for increasing soil carbon (C, and nitrogen (N stocks and soil enzyme activities play a key role in soil C and N losses during decomposition of soil organic matter. However, few studies have been carried out to elucidate the mechanisms behind the differences in soil C and N cycling by different tree species in response to climate warming. Here, we measured the responses of soil's extracellular enzyme activity (EEA to a gradient of temperatures using incubation methods in 78-year-old forest plantations with different tree species. Based on a soil enzyme kinetics model, we established a new statistical model to investigate the effects of temperature and tree species on soil EEA. In addition, we established a tree species–enzyme–C∕N model to investigate how temperature and tree species influence soil C∕N contents over time without considering plant C inputs. These extracellular enzymes included C acquisition enzymes (β-glucosidase, BG, N acquisition enzymes (N-acetylglucosaminidase, NAG; leucine aminopeptidase, LAP and phosphorus acquisition enzymes (acid phosphatases. The results showed that incubation temperature and tree species significantly influenced all soil EEA and Eucalyptus had 1.01–2.86 times higher soil EEA than coniferous tree species. Modeling showed that Eucalyptus had larger soil C losses but had 0.99–2.38 times longer soil C residence time than the coniferous tree species over time. The differences in the residual soil C and N contents between Eucalyptus and coniferous tree species, as well as between slash pine (Pinus elliottii Engelm. var. elliottii and hoop pine (Araucaria cunninghamii Ait., increase with time. On the other hand, the modeling results help explain why exotic slash pine can grow faster, as it has 1.22–1.38 times longer residual soil N residence time for LAP, which mediate soil N cycling in the long term, than native

  2. Eighteen microsatellite loci in Salix arbutifolia (Salicaceae) and cross-species amplification in Salix and Populus species.

    Science.gov (United States)

    Hoshikawa, Takeshi; Kikuchi, Satoshi; Nagamitsu, Teruyoshi; Tomaru, Nobuhiro

    2009-07-01

    Salix arbutifolia is a riparian dioecious tree species that is of conservation concern in Japan because of its highly restricted distribution. Eighteen polymorphic loci of dinucleotide microsatellites were isolated and characterized. Among these, estimates of the expected heterozygosity ranged from 0.350 to 0.879. Cross-species amplification was successful at 9-13 loci among six Salix species and at three loci in one Populus species. © 2009 Blackwell Publishing Ltd.

  3. Drought stress limits the geographic ranges of two tree species via different physiological mechanisms.

    Science.gov (United States)

    Anderegg, Leander D L; HilleRisLambers, Janneke

    2016-03-01

    Range shifts are among the most ubiquitous ecological responses to anthropogenic climate change and have large consequences for ecosystems. Unfortunately, the ecophysiological forces that constrain range boundaries are poorly understood, making it difficult to mechanistically project range shifts. To explore the physiological mechanisms by which drought stress controls dry range boundaries in trees, we quantified elevational variation in drought tolerance and in drought avoidance-related functional traits of a widespread gymnosperm (ponderosa pine - Pinus ponderosa) and angiosperm (trembling aspen - Populus tremuloides) tree species in the southwestern USA. Specifically, we quantified tree-to-tree variation in growth, water stress (predawn and midday xylem tension), drought avoidance traits (branch conductivity, leaf/needle size, tree height, leaf area-to-sapwood area ratio), and drought tolerance traits (xylem resistance to embolism, hydraulic safety margin, wood density) at the range margins and range center of each species. Although water stress increased and growth declined strongly at lower range margins of both species, ponderosa pine and aspen showed contrasting patterns of clinal trait variation. Trembling aspen increased its drought tolerance at its dry range edge by growing stronger but more carbon dense branch and leaf tissues, implying an increased cost of growth at its range boundary. By contrast, ponderosa pine showed little elevational variation in drought-related traits but avoided drought stress at low elevations by limiting transpiration through stomatal closure, such that its dry range boundary is associated with limited carbon assimilation even in average climatic conditions. Thus, the same climatic factor (drought) may drive range boundaries through different physiological mechanisms - a result that has important implications for process-based modeling approaches to tree biogeography. Further, we show that comparing intraspecific patterns of

  4. Hydraulic redistribution study in two native tree species of agroforestry parklands of West African dry savanna

    Science.gov (United States)

    Bayala, Jules; Heng, Lee Kheng; van Noordwijk, Meine; Ouedraogo, Sibiri Jean

    2008-11-01

    Hydraulic redistribution (HR) in karité ( Vitellaria paradoxa) and néré ( Parkia biglobosa) tree species was studied by monitoring the soil water potential ( ψs) using thermocouple psychrometers at four compass directions, various distances from trees and at different soil depths (max depth 80 cm) during the dry seasons of 2004 and 2005. A modified WaNuLCAS model was then used to infer the amount of water redistribued based on ψs values. Tree transpiration rate was also estimated from sap velocity using thermal dissipative probes (TDP) and sapwood area, and the contribution of hydraulically redistributed water in tree transpiration was determined. The results revealed on average that 46% of the psychrometer readings under karité and 33% under néré showed the occurrence of HR for the two years. Soil under néré displayed significantly lower fluctuations of ψs (0.16 MPa) compared to soil under karité (0.21 MPa). The results of this study indicated that the existence of HR leads to a higher ψs in the plant rhizosphere and hence is important for soil water dynamics and plant nutrition by making more accessible the soluble elements. The simulation showed that the amount of water redistributed would be approximately 73.0 L and 247.1 L per tree per day in 2005 for karité and néré, and would represent respectively 60% and 53% of the amount transpired a day. Even though the model has certainly overestimated the volume of water hydraulically redistributed by the two species, this water may play a key role in maintaining fine root viability and ensuring the well adaptation of these species to the dry areas. Therefore, knowledge of the extent of such transfers and of the seasonal patterns is required and is of paramount importance in parkland systems both for trees and associated crops.

  5. Estimating the global conservation status of more than 15,000 Amazonian tree species

    Science.gov (United States)

    ter Steege, Hans; Pitman, Nigel C. A.; Killeen, Timothy J.; Laurance, William F.; Peres, Carlos A.; Guevara, Juan Ernesto; Salomão, Rafael P.; Castilho, Carolina V.; Amaral, Iêda Leão; de Almeida Matos, Francisca Dionízia; de Souza Coelho, Luiz; Magnusson, William E.; Phillips, Oliver L.; de Andrade Lima Filho, Diogenes; de Jesus Veiga Carim, Marcelo; Irume, Mariana Victória; Martins, Maria Pires; Molino, Jean-François; Sabatier, Daniel; Wittmann, Florian; López, Dairon Cárdenas; da Silva Guimarães, José Renan; Mendoza, Abel Monteagudo; Vargas, Percy Núñez; Manzatto, Angelo Gilberto; Reis, Neidiane Farias Costa; Terborgh, John; Casula, Katia Regina; Montero, Juan Carlos; Feldpausch, Ted R.; Honorio Coronado, Euridice N.; Montoya, Alvaro Javier Duque; Zartman, Charles Eugene; Mostacedo, Bonifacio; Vasquez, Rodolfo; Assis, Rafael L.; Medeiros, Marcelo Brilhante; Simon, Marcelo Fragomeni; Andrade, Ana; Camargo, José Luís; Laurance, Susan G. W.; Nascimento, Henrique Eduardo Mendonça; Marimon, Beatriz S.; Marimon, Ben-Hur; Costa, Flávia; Targhetta, Natalia; Vieira, Ima Célia Guimarães; Brienen, Roel; Castellanos, Hernán; Duivenvoorden, Joost F.; Mogollón, Hugo F.; Piedade, Maria Teresa Fernandez; Aymard C., Gerardo A.; Comiskey, James A.; Damasco, Gabriel; Dávila, Nállarett; García-Villacorta, Roosevelt; Diaz, Pablo Roberto Stevenson; Vincentini, Alberto; Emilio, Thaise; Levis, Carolina; Schietti, Juliana; Souza, Priscila; Alonso, Alfonso; Dallmeier, Francisco; Ferreira, Leandro Valle; Neill, David; Araujo-Murakami, Alejandro; Arroyo, Luzmila; Carvalho, Fernanda Antunes; Souza, Fernanda Coelho; do Amaral, Dário Dantas; Gribel, Rogerio; Luize, Bruno Garcia; Pansonato, Marcelo Petrati; Venticinque, Eduardo; Fine, Paul; Toledo, Marisol; Baraloto, Chris; Cerón, Carlos; Engel, Julien; Henkel, Terry W.; Jimenez, Eliana M.; Maas, Paul; Mora, Maria Cristina Peñuela; Petronelli, Pascal; Revilla, Juan David Cardenas; Silveira, Marcos; Stropp, Juliana; Thomas-Caesar, Raquel; Baker, Tim R.; Daly, Doug; Paredes, Marcos Ríos; da Silva, Naara Ferreira; Fuentes, Alfredo; Jørgensen, Peter Møller; Schöngart, Jochen; Silman, Miles R.; Arboleda, Nicolás Castaño; Cintra, Bruno Barçante Ladvocat; Valverde, Fernando Cornejo; Di Fiore, Anthony; Phillips, Juan Fernando; van Andel, Tinde R.; von Hildebrand, Patricio; Barbosa, Edelcilio Marques; de Matos Bonates, Luiz Carlos; de Castro, Deborah; de Sousa Farias, Emanuelle; Gonzales, Therany; Guillaumet, Jean-Louis; Hoffman, Bruce; Malhi, Yadvinder; de Andrade Miranda, Ires Paula; Prieto, Adriana; Rudas, Agustín; Ruschell, Ademir R.; Silva, Natalino; Vela, César I. A.; Vos, Vincent A.; Zent, Eglée L.; Zent, Stanford; Cano, Angela; Nascimento, Marcelo Trindade; Oliveira, Alexandre A.; Ramirez-Angulo, Hirma; Ramos, José Ferreira; Sierra, Rodrigo; Tirado, Milton; Medina, Maria Natalia Umaña; van der Heijden, Geertje; Torre, Emilio Vilanova; Vriesendorp, Corine; Wang, Ophelia; Young, Kenneth R.; Baider, Claudia; Balslev, Henrik; de Castro, Natalia; Farfan-Rios, William; Ferreira, Cid; Mendoza, Casimiro; Mesones, Italo; Torres-Lezama, Armando; Giraldo, Ligia Estela Urrego; Villarroel, Daniel; Zagt, Roderick; Alexiades, Miguel N.; Garcia-Cabrera, Karina; Hernandez, Lionel; Huamantupa-Chuquimaco, Isau; Milliken, William; Cuenca, Walter Palacios; Pansini, Susamar; Pauletto, Daniela; Arevalo, Freddy Ramirez; Sampaio, Adeilza Felipe; Valderrama Sandoval, Elvis H.; Gamarra, Luis Valenzuela

    2015-01-01

    Estimates of extinction risk for Amazonian plant and animal species are rare and not often incorporated into land-use policy and conservation planning. We overlay spatial distribution models with historical and projected deforestation to show that at least 36% and up to 57% of all Amazonian tree species are likely to qualify as globally threatened under International Union for Conservation of Nature (IUCN) Red List criteria. If confirmed, these results would increase the number of threatened plant species on Earth by 22%. We show that the trends observed in Amazonia apply to trees throughout the tropics, and we predict that most of the world’s >40,000 tropical tree species now qualify as globally threatened. A gap analysis suggests that existing Amazonian protected areas and indigenous territories will protect viable populations of most threatened species if these areas suffer no further degradation, highlighting the key roles that protected areas, indigenous peoples, and improved governance can play in preventing large-scale extinctions in the tropics in this century. PMID:26702442

  6. Managing Commercial Tree Species for Timber Production and Carbon Sequestration: Management Guidelines and Financial Returns

    Energy Technology Data Exchange (ETDEWEB)

    Gary D. Kronrad

    2006-09-19

    A carbon credit market is developing in the United States. Information is needed by buyers and sellers of carbon credits so that the market functions equitably and efficiently. Analyses have been conducted to determine the optimal forest management regime to employ for each of the major commercial tree species so that profitability of timber production only or the combination of timber production and carbon sequestration is maximized. Because the potential of a forest ecosystem to sequester carbon depends on the tree species, site quality and management regimes utilized, analyses have determined how to optimize carbon sequestration by determining how to optimally manage each species, given a range of site qualities, discount rates, prices of carbon credits and other economic variables. The effects of a carbon credit market on the method and profitability of forest management, the cost of sequestering carbon, the amount of carbon that can be sequestered, and the amount of timber products produced has been determined.

  7. Mechanism Underlying the Spatial Pattern Formation of Dominant Tree Species in a Natural Secondary Forest.

    Directory of Open Access Journals (Sweden)

    Guodong Jia

    Full Text Available Studying the spatial pattern of plant species may provide significant insights into processes and mechanisms that maintain stand stability. To better understand the dynamics of naturally regenerated secondary forests, univariate and bivariate Ripley's L(r functions were employed to evaluate intra-/interspecific relationships of four dominant tree species (Populus davidiana, Betula platyphylla, Larix gmelinii and Acer mono and to distinguish the underlying mechanism of spatial distribution. The results showed that the distribution of soil, water and nutrients was not fragmented but presented clear gradients. An overall aggregated distribution existed at most distances. No correlation was found between the spatial pattern of soil conditions and that of trees. Both positive and negative intra- and interspecific relationships were found between different DBH classes at various distances. Large trees did not show systematic inhibition of the saplings. By contrast, the inhibition intensified as the height differences increased between the compared pairs. Except for Larix, universal inhibition of saplings by upper layer trees occurred among other species, and this reflected the vertical competition for light. Therefore, we believe that competition for light rather than soil nutrients underlies the mechanism driving the formation of stand spatial pattern in the rocky mountainous areas examined.

  8. Effects of acid rain and surfactant pollution on the foliar structure of some tree species

    International Nuclear Information System (INIS)

    Raddi, P.; Moricca, S.; Paoletti, E.

    1994-01-01

    For 10 years we have been studying the effects of acid rain and ABS (a surfactant always found in sea aerosols) on several tree species. Alterations of the leaf structure were considered as damage index. We tried to quantify the damage to the wax structure by scoring in accordance with a damage scale given by SEM observations and by computing a damage index that allowed for a comparison among tree provenances and within individuals of the same provenance or clone. We tested the response of several species: Norway spruce, silver fir, cypress, London plane, chestnut, walnut, Italian alder, tree of heaven, common maple, European white elm, manna ash, holm oak, European beech. The different species exhibited different levels of damage in relation to the type of treatment: when ABS was present, the damage was always more severe. In the broadleaved trees, the most frequent disturbances noted were: erosion of the epicuticular wax, alterations in the stomata, lesions, abscission and/or alternation of hairs. Damage from ABS treatments was compared to damge observed in coastal vegetation after strong sea winds. By comparing natural and induced damage, we were able to demonstrate that ABS is one of the possible causes of coastal vegetation decline and that ABS may also impact significantly on vegetation growing far away from the sea. (orig.)

  9. Avian species richness in relation to intensive forest management practices in early seral tree plantations.

    Science.gov (United States)

    Jones, Jay E; Kroll, Andrew J; Giovanini, Jack; Duke, Steven D; Ellis, Tana M; Betts, Matthew G

    2012-01-01

    Managers of landscapes dedicated to forest commodity production require information about how practices influence biological diversity. Individual species and communities may be threatened if management practices truncate or simplify forest age classes that are essential for reproduction and survival. For instance, the degradation and loss of complex diverse forest in young age classes have been associated with declines in forest-associated Neotropical migrant bird populations in the Pacific Northwest, USA. These declines may be exacerbated by intensive forest management practices that reduce hardwood and broadleaf shrub cover in order to promote growth of economically valuable tree species in plantations. We used a Bayesian hierarchical model to evaluate relationships between avian species richness and vegetation variables that reflect stand management intensity (primarily via herbicide application) on 212 tree plantations in the Coast Range, Oregon, USA. Specifically, we estimated the influence of broadleaf hardwood vegetation cover, which is reduced through herbicide applications, on bird species richness and individual species occupancy. Our model accounted for imperfect detection. We used average predictive comparisons to quantify the degree of association between vegetation variables and species richness. Both conifer and hardwood cover were positively associated with total species richness, suggesting that these components of forest stand composition may be important predictors of alpha diversity. Estimates of species richness were 35-80% lower when imperfect detection was ignored (depending on covariate values), a result that has critical implications for previous efforts that have examined relationships between forest composition and species richness. Our results revealed that individual and community responses were positively associated with both conifer and hardwood cover. In our system, patterns of bird community assembly appear to be associated with

  10. Relief influence on tree species richness in secondary forest fragments of Atlantic Forest, SE, Brazil

    OpenAIRE

    Silva,William Goulart da; Metzger,Jean Paul; Bernacci,Luis Carlos; Catharino,Eduardo Luís Martins; Durigan,Giselda; Simões,Sílvio

    2008-01-01

    The aim of this work was to explore the relationship between tree species richness and morphological characteristics of relief at the Ibiúna Plateau (SE Brazil). We sampled 61 plots of 0.30 ha, systematically established in 20 fragments of secondary forest (2-274 ha) and in three areas within a continuous secondary forest site, Morro Grande Reserve (9,400 ha). At each plot, 100 trees with diameter at breast height > 5 cm were sampled by the point centered quarter method, and total richness an...

  11. Incidence of butt rot in a tree species experiment in northern Denmark

    DEFF Research Database (Denmark)

    Ronnberg, J; Vollbrecht, G.; Thomsen, Iben Margrete

    1999-01-01

    The susceptibility to infections by Heterobasidion annosum (Fr.) Bref. was examined in a 28-year-old tree species experiment in northern Jutland, Denmark. Silver fir (Abies alba Mill.), Caucasian fir (Abies nordmanniana (Stev.) Spach), grand fir (Abies grandis (Dougl) Lindl.), noble fir (Abies...... trees infected, respectively. Silver fir and Caucasian fir were almost free from infections. Maximum extension of H. annosum rot columns were in Japanese larch (18 dm). Heterobasidion annosum was found to be the most important decay causing fungus. Mating tests assigned all isolated strains of H...

  12. Status of chemical elements in Atlantic Forest tree species near an industrial complex

    International Nuclear Information System (INIS)

    Araujo, A.L.L.; Fernandes, E.A.N.; Franca, E.J.; Bacchi, M.A.

    2008-01-01

    Environmental quality assessment studies have been conducted with tree species largely distributed in the Atlantic Forest. Leaf and soil samples were collected in the conservation unit Parque Estadual da Serra do Mar (PESM) nearby the industrial complex of Cubatao, Sao Paulo State, Brazil, and analyzed for chemical elements by instrumental neutron activation analysis. Results were compared to background values obtained in the Parque Estadual Carlos Botelho (PECB). The higher As, Fe, Hg and Zn mass fractions in the tree leaves of PESM indicated anthropogenic influence on this conservation unit. (author)

  13. Indirect effects of biocontrol of an invasive riparian plant (Tamarix) alters habitat and reduces herpetofauna abundance

    Science.gov (United States)

    Bateman, H.L.; Merritt, D.M.; Glenn, E.P.; Nagler, P.L.

    2014-01-01

    The biological control agent (tamarisk leaf beetle, Diorhabda spp.) is actively being used to defoliate exotic saltcedar or tamarisk (Tamarix spp.) in riparian ecosystems in western USA. The Virgin River in Arizona and Nevada is a system where tamarisk leaf beetle populations are spreading. Saltcedar biocontrol, like other control methods, has the potential to affect non-target species. Because amphibians and reptiles respond to vegetation changes in habitat and forage in areas where beetles are active, herpetofauna are model taxa to investigate potential impacts of biocontrol defoliation. Our objectives related herpetofauna abundance to vegetation cover and indices (normalized difference vegetation index, NDVI; enhanced vegetation index, EVI) and timing of biocontrol defoliation. We captured herpetofauna and ground-dwelling arthropods in trap arrays and measured vegetation using remotely sensed images and on-the-ground measurements at 16–21 sites 2 years before (2009–2010) and 2 years following (2011–2012) biocontrol defoliation. Following defoliation, riparian stands (including stands mixed with native and exotic trees and stands of monotypic exotic saltcedar) had significantly lower NDVI and EVI values and fewer captures of marked lizards. Total captures of herpetofauna (toads, lizards, and snakes) were related to higher vegetation cover and sites with a lower proportion of saltcedar. Our results suggest that effects of biocontrol defoliation are likely to be site-specific and depend upon the proportion of native riparian trees established prior to biocontrol introduction and defoliation. The mechanisms by which habitat structure, microclimate, and ultimately vertebrate species are affected by exotic plant biocontrol riparian areas should be a focus of natural-resource managers.

  14. Soil greenhouse gas fluxes from different tree species on Taihang Mountain, North China

    Science.gov (United States)

    Liu, X. P.; Zhang, W. J.; Hu, C. S.; Tang, X. G.

    2014-03-01

    The objectives of this study were to investigate seasonal variation of greenhouse gas fluxes from soils on sites dominated by plantation (Robinia pseudoacacia, Punica granatum, and Ziziphus jujube) and natural regenerated forests (Vitex negundo var. heterophylla, Leptodermis oblonga, and Bothriochloa ischcemum), and to identify how tree species, litter exclusion, and soil properties (soil temperature, soil moisture, soil organic carbon, total N, soil bulk density, and soil pH) explained the temporal and spatial variation in soil greenhouse gas fluxes. Fluxes of greenhouse gases were measured using static chamber and gas chromatography techniques. Six static chambers were randomly installed in each tree species. Three chambers were randomly designated to measure the impacts of surface litter exclusion, and the remaining three were used as a control. Field measurements were conducted biweekly from May 2010 to April 2012. Soil CO2 emissions from all tree species were significantly affected by soil temperature, soil moisture, and their interaction. Driven by the seasonality of temperature and precipitation, soil CO2 emissions demonstrated a clear seasonal pattern, with fluxes significantly higher during the rainy season than during the dry season. Soil CH4 and N2O fluxes were not significantly correlated with soil temperature, soil moisture, or their interaction, and no significant seasonal differences were detected. Soil organic carbon and total N were significantly positively correlated with CO2 and N2O fluxes. Soil bulk density was significantly negatively correlated with CO2 and N2O fluxes. Soil pH was not correlated with CO2 and N2O emissions. Soil CH4 fluxes did not display pronounced dependency on soil organic carbon, total N, soil bulk density, and soil pH. Removal of surface litter significantly decreased in CO2 emissions and CH4 uptakes. Soils in six tree species acted as sinks for atmospheric CH4. With the exception of Ziziphus jujube, soils in all tree

  15. Prediction of Dominant Forest Tree Species Using QuickBird and Environmental Data

    Directory of Open Access Journals (Sweden)

    Azadeh Abdollahnejad

    2017-02-01

    Full Text Available Modelling the spatial distribution of plants is one of the indirect methods for predicting the properties of plants and can be defined based on the relationship between the spatial distribution of vegetation and environmental variables. In this article, we introduce a new method for the spatial prediction of the dominant trees and species, through a combination of environmental and satellite data. Based on the basal area factor (BAF frequency for each tree species in a total of 518 sample plots, the dominant tree species were determined for each plot. Also, topographical maps of primary and secondary properties were prepared using the digital elevation model (DEM. Categories of soil and the climate maps database of the Doctor Bahramnia Forestry Plan were extracted as well. After pre-processing and processing of spectral data, the pixel values at the sample locations in all the independent factors such as spectral and non-spectral data, were extracted. The modelling rates of tree and shrub species diversity using data mining algorithms of 80% of the sampling plots were taken. Assessment of model accuracy was conducted using 20% of samples and evaluation criteria. Random forest (RF, support vector machine (SVM and k-nearest neighbor (k-NN algorithms were used for spatial distribution modelling of dominant species groups using environmental and spectral variables from 80% of the sample plots. Results showed physiographic factors, especially altitude in combination with soil and climate factors as the most important variables in the distribution of species, while the best model was created by the integration of physiographic factors (in combination with soil and climate with an overall accuracy of 63.85%. In addition, the results of the comparison between the algorithms, showed that the RF algorithm was the most accurate in modelling the diversity.

  16. Ecophysiological evaluation of tree species for biomonitoring of air quality and identification of air pollution-tolerant species.

    Science.gov (United States)

    Sen, Abhishek; Khan, Indrani; Kundu, Debajyoti; Das, Kousik; Datta, Jayanta Kumar

    2017-06-01

    Identification of tree species that can biologically monitor air pollution and can endure air pollution is very much important for a sustainable green belt development around any polluted place. To ascertain the species, ten tree species were selected on the basis of some previous study from the campus of the University of Burdwan and were studied in the pre-monsoon and post-monsoon seasons. The study has been designed to investigate biochemical and physiological activities of selected tree species as the campus is presently exposed to primary air pollutants and their impacts on plant community were observed through the changes in several physical and biochemical constituents of plant leaves. As the plant species continuously exchange different gaseous pollutants in and out of the foliar system and are very sensitive to gaseous pollutants, they serve as bioindicators. Due to air pollution, foliar surface undergoes different structural and functional changes. In the selected plant species, it was observed that the concentration of primary air pollutants, proline content, pH, relative water holding capacity, photosynthetic rate, and respiration rate were higher in the pre-monsoon than the post-monsoon season, whereas the total chlorophyll, ascorbic acid, sugar, and conductivity were higher in the post-monsoon season. From the entire study, it was observed that the concentration of sulfur oxide (SO x ), nitrogen oxide (NO x ), and suspended particulate matter (SPM) all are reduced in the post-monsoon season than the pre-monsoon season. In the pre-monsoon season, SO x , NO x , and SPM do not have any significant correlation with biochemical as well as physiological parameters. SPM shows a negative relationship with chlorophyll 'a' (r = -0.288), chlorophyll 'b' (r = -0.267), and total chlorophyll (r = -0.238). Similarly, chlorophyll a, chlorophyll b, and the total chlorophyll show negative relations with SO x and NO x (p tree species according to their air

  17. Reliance on deep soil water in the tree species Argania spinosa.

    Science.gov (United States)

    Zunzunegui, M; Boutaleb, S; Díaz Barradas, M C; Esquivias, M P; Valera, J; Jáuregui, J; Tagma, T; Ain-Lhout, F

    2017-12-07

    In South-western Morocco, water scarcity and high temperature are the main factors determining species survival. Argania spinosa (L.) Skeels is a tree species, endemic to Morocco, which is suffering from ongoing habitat shrinkage. Argan trees play essential local ecological and economic roles: protecting soils from erosion, shading different types of crops, helping maintain soil fertility and, even more importantly, its seeds are used by the local population for oil production, with valuable nutritional, medicinal and cosmetic purposes. The main objective of this study was to identify the sources of water used by this species and to assess the effect of water availability on the photosynthetic rate and stem water potential in two populations: one growing on the coast and a second one 10 km inland. Stem water potential, photosynthetic rate and xylem water isotopic composition (δ18O) were seasonally monitored during 2 years. Trees from both populations showed a similar strategy in the use of the available water sources, which was strongly dependent on deep soil water throughout the year. Nevertheless, during the wet season or under low precipitation a more complex water uptake pattern was found with a mixture of water sources, including precipitation and soil at different depths. No evidence was found of the use of either groundwater or atmospheric water in this species. Despite the similar water-use strategy, the results indicate that Argania trees from the inland population explored deeper layers than coastal ones as suggested by more depleted δ18O values recorded in the inland trees and better photosynthetic performance, hence suggesting that the coastal population of A. spinosa could be subjected to higher stress. © The Author 2017. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

  18. Temperature response surfaces for mortality risk of tree species with future drought

    Science.gov (United States)

    Adams, Henry D.; Barron-Gafford, Greg A.; Minor, Rebecca L.; Gardea, Alfonso A.; Bentley, Lisa Patrick; Law, Darin J.; Breshears, David D.; McDowell, Nate G.; Huxman, Travis E.

    2017-11-01

    Widespread, high levels of tree mortality, termed forest die-off, associated with drought and rising temperatures, are disrupting forests worldwide. Drought will likely become more frequent with climate change, but even without more frequent drought, higher temperatures can exacerbate tree water stress. The temperature sensitivity of drought-induced mortality of tree species has been evaluated experimentally for only single-step changes in temperature (ambient compared to ambient + increase) rather than as a response surface (multiple levels of temperature increase), which constrains our ability to relate changes in the driver with the biological response. Here we show that time-to-mortality during drought for seedlings of two western United States tree species, Pinus edulis (Engelm.) and Pinus ponderosa (Douglas ex C. Lawson), declined in continuous proportion with increasing temperature spanning a 7.7 °C increase. Although P. edulis outlived P. ponderosa at all temperatures, both species had similar relative declines in time-to-mortality as temperature increased (5.2% per °C for P. edulis; 5.8% per °C for P. ponderosa). When combined with the non-linear frequency distribution of drought duration—many more short droughts than long droughts—these findings point to a progressive increase in mortality events with global change due to warming alone and independent of additional changes in future drought frequency distributions. As such, dire future forest recruitment patterns are projected assuming the calculated 7-9 seedling mortality events per species by 2100 under business-as-usual warming occur, congruent with additional vulnerability predicted for adult trees from stressors like pathogens and pests. Our progressive projection for increased mortality events was driven primarily by the non-linear shape of the drought duration frequency distribution, a common climate feature of drought-affected regions. These results illustrate profound benefits for

  19. Population Development of Several Species of Ants on the Cocoa Trees in South Sulawesi

    Directory of Open Access Journals (Sweden)

    Fatahuddin Fatahuddin

    2010-08-01

    Full Text Available Several species of ants with different behavior have been found in cocoa plantations and their behavior is important to be considered because it might be correlated with the degree of protection of cocoa plant from cocoa pests. The aim of this research is to manipulate and to develop ants population in environment, so they are able to establish permanently in cocoa trees. This research was conducted in Papakaju Regions Luwu Regency in Juli to November 2009. In this study, 10 cocoa trees with ants were sampled (each species of ant in 10 cocoa trees. A control of 10 tree samples without ant was also taken. In order to assess the abundance of ant population, it was grouped based on scoring, which score 1 for less than 20 ants, score 2 for 21–50 ants, score 3 for 51–200 ants, score 4 for 201–1000 ants, and score 5 for more than 1000 per tree. The results indicated that average of population score of the three ants species reached the highest population for the Oecophylla. smaragdina with average score 4.85 (>1000 ants, Dolichoderus thoracicus, with average score 3.90 (> 200 ants and Crematogaster. difformis with average score 3.10 (>200 ants. This research indicated that three species of ants, Oecophylla smaragdina (weaver ant, Dolichoderus thoracicus (cocoa black ant and Crematogaster difformis (cracking ant. in farmer cocoa plantations in South Sulawesi giving better performance against major pests of cocoa in particular cocoa pod borer (CPB. Key words: Ant Population, Oecophylla smaragdina, Dolichoderus thoracicus, Crematogaster difformis, artificial nest, cocoa.

  20. Seed rain under native and non-native tree species in the Cabo Rojo National Wildlife Refuge, Puerto Rico.

    Science.gov (United States)

    Arias Garcia, Andrea; Chinea, J Danilo

    2014-09-01

    Seed dispersal is a fundamental process in plant ecology and is of critical importance for the restoration of tropical communities. The lands of the Cabo Rojo National Wildlife Refuge (CRNWR), formerly under agriculture, were abandoned in the 1970s and colonized mainly by non-native tree species of degraded pastures. Here we described the seed rain under the most common native and non-native trees in the refuge in an attempt to determine if focal tree geographic origin (native versus non-native) influences seed dispersal. For this, seed rain was sampled for one year under the canopies of four native and four non-native tree species common in this refuge using 40 seed traps. No significant differences were found for the abundance of seeds, or their diversity, dispersing under native versus non-native focal tree species, nor under the different tree species. A significantly different seed species composition was observed reaching native versus non-native focal species. However, this last result could be more easily explained as a function of distance of the closest adults of the two most abundantly dispersed plant species to the seed traps than as a function of the geographic origin of the focal species. We suggest to continue the practice of planting native tree species, not only as a way to restore the community to a condition similar to the original one, but also to reduce the distances needed for effective dispersal.

  1. Asymptotic Properties of the Number of Matching Coalescent Histories for Caterpillar-Like Families of Species Trees.

    Science.gov (United States)

    Disanto, Filippo; Rosenberg, Noah A

    2016-01-01

    Coalescent histories provide lists of species tree branches on which gene tree coalescences can take place, and their enumerative properties assist in understanding the computational complexity of calculations central in the study of gene trees and species trees. Here, we solve an enumerative problem left open by Rosenberg (IEEE/ACM Transactions on Computational Biology and Bioinformatics 10: 1253-1262, 2013) concerning the number of coalescent histories for gene trees and species trees with a matching labeled topology that belongs to a generic caterpillar-like family. By bringing a generating function approach to the study of coalescent histories, we prove that for any caterpillar-like family with seed tree t , the sequence (h n ) n ≥ 0 describing the number of matching coalescent histories of the n th tree of the family grows asymptotically as a constant multiple of the Catalan numbers. Thus, h n  ∼ β t c n , where the asymptotic constant β t > 0 depends on the shape of the seed tree t. The result extends a claim demonstrated only for seed trees with at most eight taxa to arbitrary seed trees, expanding the set of cases for which detailed enumerative properties of coalescent histories can be determined. We introduce a procedure that computes from t the constant β t as well as the algebraic expression for the generating function of the sequence (h n ) n ≥ 0 .

  2. Frost hardiness of tree species is independent of phenology and macroclimatic niche.

    Science.gov (United States)

    Hofmann, M; Bruelheide, H

    2015-03-01

    The differences in timing in bud burst between species have been interpreted as an adaptation to late frost events in spring. Thus, it has been suggested that the degree of frost susceptibility of leaves is species-specific and depends on the species' phenology and geographic distribution range. To test for relationships between frost tolerance and phenology as well as between frost tolerance and distribution range across Central European tree species, we studied the frost hardiness of closed buds before bud burst and of freshly opened buds at the time of bud burst. We hypothesized that species with early bud burst and species distributed in eastern and northern areas were more frost tolerant than species with late bud burst and species distributed in western and southern areas. Frost hardiness was estimated by exposing twigs to 11 frost temperatures between -4 °C and -80 °C and by assessing tissue damage by the electrolyte leakage method. In contrast to our hypotheses, neither frost hardiness of closed buds nor frost hardiness of freshly opened buds were related to any variable describing species' macroclimatic niche. Furthermore, frost hardiness of freshly opened buds did not differ among species. Thus, the investigated species with early bud burst take higher risks of frost damage than the species with late bud bursts. These findings indicate that frost hardiness might not play the key role in limiting the geographic distribution ranges previously anticipated.

  3. Study of root tensile strength of softwood and hardwood tree species: Implications for slope stability

    Science.gov (United States)

    Esmaiili, Marzieh; Abdi, Ehsan; Jafary, Mohammad; Majnounian, Baris

    2017-04-01

    Landslides are known as one of the major natural hazards and often incurring economics and human life losses. The role of tree roots in slope stability is very important, especially when human lives and infrastructure are at risk. The anchorage of roots and improvement of slope stability mainly depend on specific properties of root network systems, such as tensile strength. These properties of the roots which govern the degree of reinforcement are different among tree species. Although, many studies have been conducted about plant biotechnical properties of species, yet there is lack of knowledge on comparing root systems of softwood and hardwood tree species for similar site conditions. Therefore this study was conducted to assess the tensile strength of the root system of Picea abies (softwood species) and Fraxinus excelsior (hardwood species) planted on two forested hillslopes. To this aim, single root specimens were sampled for each species and their tensile strength were then measured in laboratory using a computer controlled Instron Universal Testing Machine. According to the results root tensile strength tends to decrease with diameter according to a power law for both species. Based on analysis of covariance (ANCOVA), a significant difference has been observed in the tensile strength between the two studied species. Also the results showed that the value of mean root tensile strength for Picea abies (19.31 ± 2.64 MPa) was much more than that of Fraxinus excelsior (16.98 ± 1.01 MPa) within all root diameter classes. The data presented in this study may expand the knowledge of biotechnical properties of Picea abies and Fraxinus excelsior, as biomaterial for soil bioengineering.

  4. Comparative hydraulic architecture of tropical tree species representing a range of successional stages and wood density.

    Science.gov (United States)

    McCulloh, Katherine A; Meinzer, Frederick C; Sperry, John S; Lachenbruch, Barbara; Voelker, Steven L; Woodruff, David R; Domec, Jean-Christophe

    2011-09-01

    Plant hydraulic architecture (PHA) has been linked to water transport sufficiency, photosynthetic rates, growth form and attendant carbon allocation. Despite its influence on traits central to conferring an overall competitive advantage in a given environment, few studies have examined whether key aspects of PHA are indicative of successional stage, especially within mature individuals. While it is well established that wood density (WD) tends to be lower in early versus late successional tree species, and that WD can influence other aspects of PHA, the interaction of WD, successional stage and the consequent implications for PHA have not been sufficiently explored. Here, we studied differences in PHA at the scales of wood anatomy to whole-tree hydraulic conductance in species in early versus late successional Panamanian tropical forests. Although the trunk WD was indistinguishable between the successional groups, the branch WD was lower in the early successional species. Across all species, WD correlated negatively with vessel diameter and positively with vessel packing density. The ratio of branch:trunk vessel diameter, branch sap flux and whole-tree leaf-specific conductance scaled negatively with branch WD across species. Pioneer species showed greater sap flux in branches than in trunks and a greater leaf-specific hydraulic conductance, suggesting that pioneer species can move greater quantities of water at a given tension gradient. In combination with the greater water storage capacitance associated with lower WD, these results suggest these pioneer species can save on the carbon expenditure needed to build safer xylem and instead allow more carbon to be allocated to rapid growth.

  5. Development of oligonucleotide microarrays for simultaneous multi-species identification of Phellinus tree-pathogenic fungi.

    Science.gov (United States)

    Tzean, Yuh; Shu, Po-Yao; Liou, Ruey-Fen; Tzean, Shean-Shong

    2016-03-01

    Polyporoid Phellinus fungi are ubiquitously present in the environment and play an important role in shaping forest ecology. Several species of Phellinus are notorious pathogens that can affect a broad variety of tree species in forest, plantation, orchard and urban habitats; however, current detection methods are overly complex and lack the sensitivity required to identify these pathogens at the species level in a timely fashion for effective infestation control. Here, we describe eight oligonucleotide microarray platforms for the simultaneous and specific detection of 17 important Phellinus species, using probes generated from the internal transcribed spacer regions unique to each species. The sensitivity, robustness and efficiency of this Phellinus microarray system was subsequently confirmed against template DNA from two key Phellinus species, as well as field samples collected from tree roots, trunks and surrounding soil. This system can provide early, specific and convenient detection of Phellinus species for forestry, arboriculture and quarantine inspection, and could potentially help to mitigate the environmental and economic impact of Phellinus-related diseases. © 2015 The Authors. Microbial Biotechnology published by John Wiley & Sons Ltd and Society for Applied Microbiology.

  6. Allometry and growth of six tree species in a terra firme forest in colombian amazonia

    International Nuclear Information System (INIS)

    Giraldo Pamplona Wilson A; Dairon, Alvaro; Cardenas Montoya J, Duque

    2011-01-01

    In this study carried out in the Amacayacu National Park in the Colombian Amazonia, we assessed the allometric relationship among different tree structural variables and the growth in diameter and biomass of six species classified according to their wood specific gravity. The tree species chosen were Eschweilera rufolia, Eschweilera itayensis, Conceveiba guianensis, Otoba parvifolia, Pseudolmedia laevis, and Apeiba aspera. The dbh was the most important structural explanatory variable. Regarding the total height dbh model, the allometric coefficient b changed between species showing a trend to increase, and thus a taper decrease, proportional to. There were o significant differences in diameter growth between species (P=0.119, F=1.80) or functional groups (P=0.153, F= 1.19). Likewise, biomass growth did not show significant differences neither between species (P=0.0784, F=2.05) nor functional groups (P=0.0711, F=2.71). However, there was a positive trend between and diameter growth and a negative one between and biomass growth. The results of this study suggest that this forest is recovering in biomass at a constant rate independent of the patch age, which emphasizes on the importance of pioneer species and gap formation on the carbon dynamics and the species coexistence in Amazonian tierra firme forests.

  7. The brown tree snake, an introduced pest species in the central Pacific Islands

    Science.gov (United States)

    Fritts, Thomas H.; Rodda, Gordon H.

    1989-01-01

    The reproduction of endangered Mariana crows (Corvus kubaryi) is intensively monitored, nests are protected, and (when necessary) eggs or young are moved to the safety of lab conditions until they are less vulnerable to the threats in natural habitats. Barriers on tree trunks and judicious pruning of adjacent trees are used in attempts to exclude snakes from nest trees. Two birds unique to Guam--the Micronesian kingfisher (Halcyon cinnamomina cinnamomina) and Guam rail (Gallirallus owstoni)-- are maintained at captive propagation facilities on Guam and in mainland zoos. Studies of these and other species, in captivity and on nearby islands, are underway to bolster our biological understanding of their behavior, reproduction, habitat use, and population biology.

  8. Restoration ecology and invasive riparian plants: An introduction to the special section on Tamarix spp. in western North America

    Science.gov (United States)

    Shafroth, Patrick B.; Briggs, Mark K.

    2008-01-01

    River systems around the world are subject to various perturbations, including the colonization and spread of non-native species in riparian zones. Riparian resource managers are commonly engaged in efforts to control problematic non-native species and restore native habitats. In western North America, small Eurasian trees or shrubs in the genus Tamarixoccupy hundreds of thousands of hectares of riparian lands, and are the targets of substantial and costly control efforts and associated restoration activities. Still, significant information gaps exist regarding approaches used in control and restoration efforts and their effects on riparian ecosystems. In this special section of papers, eight articles address various aspects of control and restoration associated with Tamarix spp. These include articles focused on planning restoration and revegetation; a synthetic analysis of past restoration efforts; and several specific research endeavors examining plant responses, water use, and various wildlife responses (including birds, butterflies, and lizards). These articles represent important additions to the Tamarix spp. literature and contain many lessons and insights that should be transferable to other analogous situations in river systems globally.

  9. Tree species and soil nutrient profiles in old-growth forests of the Oregon Coast Range

    Science.gov (United States)

    Cross, Alison; Perakis, Steven S.

    2011-01-01

    Old-growth forests of the Pacific Northwest provide a unique opportunity to examine tree species – soil relationships in ecosystems that have developed without significant human disturbance. We characterized foliage, forest floor, and mineral soil nutrients associated with four canopy tree species (Douglas-fir (Pseudotsuga menziesii (Mirbel) Franco), western hemlock (Tsuga heterophylla (Raf.) Sarg.), western redcedar (Thuja plicata Donn ex D. Don), and bigleaf maple (Acer macrophyllum Pursh)) in eight old-growth forests of the Oregon Coast Range. The greatest forest floor accumulations of C, N, P, Ca, Mg, and K occurred under Douglas-fir, primarily due to greater forest floor mass. In mineral soil, western hemlock exhibited significantly lower Ca concentration and sum of cations (Ca + Mg + K) than bigleaf maple, with intermediate values for Douglas-fir and western redcedar. Bigleaf maple explained most species-based differences in foliar nutrients, displaying high concentrations of N, P, Ca, Mg, and K. Foliar P and N:P variations largely reflected soil P variation across sites. The four tree species that we examined exhibited a number of individualistic effects on soil nutrient levels that contribute to biogeochemical heterogeneity in these ecosystems. Where fire suppression and long-term succession favor dominance by highly shade-tolerant western hemlock, our results suggest a potential for declines in both soil Ca availability and soil biogeochemical heterogeneity in old-growth forests.

  10. Differences between height- and light-dependent changes in shoot traits in five deciduous tree species.

    Science.gov (United States)

    Osada, Noriyuki; Okabe, Yoshihiko; Hayashi, Daisuke; Katsuyama, Tomonori; Tokuchi, Naoko

    2014-01-01

    The effects of tree height on shoot traits may in some cases differ in magnitude and direction from the effects of light. Nevertheless, general patterns of change in shoot traits in relation to variations in height and light have not so far been revealed. A comprehensive analysis of the differences between the effects of height and light on a range of leaf and shoot traits is important for the scaling of these traits to individual trees. We investigated the biomass allocation and structure of current-year shoots at the top of the crowns of five deciduous tree species in Japan. Height effect was investigated by comparing shoot traits among trees of different heights growing under a high light environment. The effects of light were examined by comparing saplings growing in high- and low-light environments. The effects of light were significant for most traits, while those of height were not significant for some traits. The magnitudes of the effects of light were larger than those of height for most traits related to biomass allocation. There was an extreme difference between the effects of height and light in the direction of change in the length of current-year shoots and in the number of standing leaves. The measures of both parameters increased with the increase in light, but decreased with the increase in tree height. Thus, the effects of height and light on diverse traits at the level of current-year shoots were not always similar. These results suggest that great care must be taken when scaling shoot traits from small trees to tall trees because the effects of height and light can be complex.

  11. The role of multimodal signals in species recognition between tree-killing bark beetles in a narrow sympatric zone.

    Science.gov (United States)

    Deepa S. Pureswaran; Richard W. Hofstetter; Brian Sullivan; Kristen A. Potter

    2016-01-01

    When related species coexist, selection pressure should favor evolution of species recognition mechanisms to prevent interspecific pairing and wasteful reproductive encounters. We investigated the potential role of pheromone and acoustic signals in species recognition between two species of tree-killing bark beetles, the southern pine beetle, Dendroctonus frontalis...

  12. Flood-ring formation and root development in response to experimental flooding of young Quercus robur trees

    NARCIS (Netherlands)

    Copini, Paul; Ouden, den Jan; Robert, Elisabeth M.R.; Tardif, Jacques C.; Loesberg, Walter A.; Goudzwaard, Leo; Sass-Klaassen, Ute

    2016-01-01

    Spring flooding in riparian forests can cause significant reductions in earlywood-vessel size in submerged stem parts of ring-porous tree species, leading to the presence of ‘flood rings’ that can be used as a proxy to reconstruct past flooding events, potentially over millennia. The mechanism of

  13. On the Use of Shortwave Infrared for Tree Species Discrimination in Tropical Semideciduous Forest

    Science.gov (United States)

    Ferreira, M. P.; Zortea, M.; Zanotta, D. C.; Féret, J. B.; Shimabukuro, Y. E.; Souza Filho, C. R.

    2015-08-01

    Tree species mapping in tropical forests provides valuable insights for forest managers. Keystone species can be located for collection of seeds for forest restoration, reducing fieldwork costs. However, mapping of tree species in tropical forests using remote sensing data is a challenge due to high floristic and spectral diversity. Little is known about the use of different spectral regions as most of studies performed so far used visible/near-infrared (390-1000 nm) features. In this paper we show the contribution of shortwave infrared (SWIR, 1045-2395 nm) for tree species discrimination in a tropical semideciduous forest. Using high-resolution hyperspectral data we also simulated WorldView-3 (WV-3) multispectral bands for classification purposes. Three machine learning methods were tested to discriminate species at the pixel-level: Linear Discriminant Analysis (LDA), Support Vector Machines with Linear (L-SVM) and Radial Basis Function (RBF-SVM) kernels, and Random Forest (RF). Experiments were performed using all and selected features from the VNIR individually and combined with SWIR. Feature selection was applied to evaluate the effects of dimensionality reduction and identify potential wavelengths that may optimize species discrimination. Using VNIR hyperspectral bands, RBF-SVM achieved the highest average accuracy (77.4%). Inclusion of the SWIR increased accuracy to 85% with LDA. The same pattern was also observed when WV-3 simulated channels were used to classify the species. The VNIR bands provided and accuracy of 64.2% for LDA, which was increased to 79.8 % using the new SWIR bands that are operationally available in this platform. Results show that incorporating SWIR bands increased significantly average accuracy for both the hyperspectral data and WorldView-3 simulated bands.

  14. Sap Flux Scaled Transpiration in Ring-porous Tree Species: Assumptions, Pitfalls and Calibration

    Science.gov (United States)

    Bush, S. E.; Hultine, K. R.; Ehleringer, J. R.

    2008-12-01

    Thermal dissipation probes for measuring sap flow (Granier-type) at the whole tree and stand level are routinely used in forest ecology and site water balance studies. While the original empirical relationship used to calculate sap flow was reported as independent of wood anatomy (ring-porous, diffuse-porous, tracheid), it has been suggested that potentially large errors in sap flow calculations may occur when using the original calibration for ring-porous species, due to large radial trends in sap velocity and/or shallow sapwood depth. Despite these concerns, sap flux measurements have rarely been calibrated in ring-porous taxa. We used a simple technique to calibrate thermal dissipation sap flux measurements on ring-porous trees in the lab. Calibration measurements were conducted on five ring-porous species in the Salt Lake City, USA metropolitan area including Quercus gambelii (Gambel oak), Gleditsia triacanthos (Honey locust), Elaeagnus angustifolia (Russian olive), Sophora japonica (Japanese pagoda), and Celtis occidentalis (Common hackberry). Six stems per species of approximately 1 m in length were instrumented with heat dissipation probes to measure sap flux concurrently with gravimetric measurements of water flow through each stem. Safranin dye was pulled through the stems following flow rate measurements to determine sapwood area. As expected, nearly all the conducting sapwood area was limited to regions within the current year growth rings. Consequently, we found that the original Granier equation underestimated sap flux density for all species considered. Our results indicate that the use of thermal dissipation probes for measuring sap flow in ring-porous species should be independently calibrated, particularly when species- specific calibration data are not available. Ring-porous taxa are widely distributed and represent an important component of the regional water budgets of many temperate regions. Our results are important for evaluating plant water

  15. Epigenetic variability in the genetically uniform forest tree species Pinus pinea L.

    Directory of Open Access Journals (Sweden)

    Enrique Sáez-Laguna

    Full Text Available There is an increasing interest in understanding the role of epigenetic variability in forest species and how it may contribute to their rapid adaptation to changing environments. In this study we have conducted a genome-wide analysis of cytosine methylation pattern in Pinus pinea, a species characterized by very low levels of genetic variation and a remarkable degree of phenotypic plasticity. DNA methylation profiles of different vegetatively propagated trees from representative natural Spanish populations of P. pinea were analyzed with the Methylation Sensitive Amplified Polymorphism (MSAP technique. A high degree of cytosine methylation was detected (64.36% of all scored DNA fragments. Furthermore, high levels of epigenetic variation were observed among the studied individuals. This high epigenetic variation found in P. pinea contrasted with the lack of genetic variation based on Amplified Fragment Length Polymorphism (AFLP data. In this manner, variable epigenetic markers clearly discriminate individuals and differentiates two well represented populations while the lack of genetic variation revealed with the AFLP markers fail to differentiate at both, individual or population levels. In addition, the use of different replicated trees allowed identifying common polymorphic methylation sensitive MSAP markers among replicates of a given propagated tree. This set of MSAPs allowed discrimination of the 70% of the analyzed trees.

  16. Epigenetic variability in the genetically uniform forest tree species Pinus pinea L.

    Science.gov (United States)

    Sáez-Laguna, Enrique; Guevara, María-Ángeles; Díaz, Luis-Manuel; Sánchez-Gómez, David; Collada, Carmen; Aranda, Ismael; Cervera, María-Teresa

    2014-01-01

    There is an increasing interest in understanding the role of epigenetic variability in forest species and how it may contribute to their rapid adaptation to changing environments. In this study we have conducted a genome-wide analysis of cytosine methylation pattern in Pinus pinea, a species characterized by very low levels of genetic variation and a remarkable degree of phenotypic plasticity. DNA methylation profiles of different vegetatively propagated trees from representative natural Spanish populations of P. pinea were analyzed with the Methylation Sensitive Amplified Polymorphism (MSAP) technique. A high degree of cytosine methylation was detected (64.36% of all scored DNA fragments). Furthermore, high levels of epigenetic variation were observed among the studied individuals. This high epigenetic variation found in P. pinea contrasted with the lack of genetic variation based on Amplified Fragment Length Polymorphism (AFLP) data. In this manner, variable epigenetic markers clearly discriminate individuals and differentiates two well represented populations while the lack of genetic variation revealed with the AFLP markers fail to differentiate at both, individual or population levels. In addition, the use of different replicated trees allowed identifying common polymorphic methylation sensitive MSAP markers among replicates of a given propagated tree. This set of MSAPs allowed discrimination of the 70% of the analyzed trees.

  17. Gene flow among established Puerto Rican populations of the exotic tree species, Albizia lebbeck.

    Science.gov (United States)

    Dunphy, B K; Hamrick, J L

    2005-04-01

    We estimate gene flow and patterns of genetic diversity in Albizia lebbeck, an invasive leguminous tree in the dry forest of southwestern Puerto Rico. Genetic diversity estimates calculated for 10 populations of 24 trees each indicated that these populations may have been formed from multiple introductions. The presence of unique genotypes in the northernmost populations suggests that novel genotypes are still immigrating into the area. This combination of individuals from disparate locations led to high estimates of genetic diversity (He = 0.266, P = 0.67). Indirect estimates of gene flow indicate that only 0.69 migrants per generation move between populations, suggesting that genetic diversity within populations should decrease due to genetic drift. Since migration-drift equilibrium was not found, however, this estimate needs to be viewed with caution. The regular production of pods in this outcrossing species (tm = 0.979) indicates that sufficient outcross pollen is received to insure successful reproduction. Direct estimates of gene flow indicate that between 44 and 100% of pollen received by trees in four small stands of trees (n < 11) was foreign. The role of gene flow in facilitating the spread of this invasive plant species is discussed.

  18. Revisiting the phylogeny of Zoanthidea (Cnidaria: Anthozoa): Staggered alignment of hypervariable sequences improves species tree inference.

    Science.gov (United States)

    Swain, Timothy D

    2018-01-01

    The recent rapid proliferation of novel taxon identification in the Zoanthidea has been accompanied by a parallel propagation of gene trees as a tool of species discovery, but not a corresponding increase in our understanding of phylogeny. This disparity is caused by the trade-off between the capabilities of automated DNA sequence alignment and data content of genes applied to phylogenetic inference in this group. Conserved genes or segments are easily aligned across the order, but produce poorly resolved trees; hypervariable genes or segments contain the evolutionary signal necessary for resolution and robust support, but sequence alignment is daunting. Staggered alignments are a form of phylogeny-informed sequence alignment composed of a mosaic of local and universal regions that allow phylogenetic inference to be applied to all nucleotides from both hypervariable and conserved gene segments. Comparisons between species tree phylogenies inferred from all data (staggered alignment) and hypervariable-excluded data (standard alignment) demonstrate improved confidence and greater topological agreement with other sources of data for the complete-data tree. This novel phylogeny is the most comprehensive to date (in terms of taxa and data) and can serve as an expandable tool for evolutionary hypothesis testing in the Zoanthidea. Spanish language abstract available in Text S1. Translation by L. O. Swain, DePaul University, Chicago, Illinois, 60604, USA. Copyright © 2017 Elsevier Inc. All rights reserved.

  19. Non-native tree species in urban areas of the city of Nitra

    International Nuclear Information System (INIS)

    Galis, M

    2014-01-01

    Non-native plant species are part of our environment. The introduction of these species is huge conditioned by anthropogenic activities, such as the urban environment is characterized by. During the field surveys of selected town Nitra (Chrenova, Mikova Ves, Zobor), we studied the frequency of non-native tree species in the contact zone. Overall, we found out the presence of 10 alien species, observed in this area. Our results show dominant presence of the species Rhus typhina, followed by the Robinia pseudoacacia and Ailanthus altissima. Individual plants were tied largely to the surrounding of built-up areas, often growns directly in front of houses, or as a part of urban green. (author)

  20. Pervasive phosphorus limitation of tree species but not communities in tropical forests

    Science.gov (United States)

    Turner, Benjamin L.; Brenes-Arguedas, Tania; Condit, Richard

    2018-03-01

    Phosphorus availability is widely assumed to limit primary productivity in tropical forests, but support for this paradigm is equivocal. Although biogeochemical theory predicts that phosphorus limitation should be prevalent on old, strongly weathered soils, experimental manipulations have failed to detect a consistent response to phosphorus addition in species-rich lowland tropical forests. Here we show, by quantifying the growth of 541 tropical tree species across a steep natural phosphorus gradient in Panama, that phosphorus limitation is widespread at the level of individual species and strengthens markedly below a threshold of two parts per million exchangeable soil phosphate. However, this pervasive species-specific phosphorus limitation does not translate into a community-wide response, because some species grow rapidly on infertile soils despite extremely low phosphorus availability. These results redefine our understanding of nutrient limitation in diverse plant communities and have important implications for attempts to predict the response of tropical forests to environmental change.

  1. Hybrid-Lambda: simulation of multiple merger and Kingman gene genealogies in species networks and species trees.

    Science.gov (United States)

    Zhu, Sha; Degnan, James H; Goldstien, Sharyn J; Eldon, Bjarki

    2015-09-15

    There has been increasing interest in coalescent models which admit multiple mergers of ancestral lineages; and to model hybridization and coalescence simultaneously. Hybrid-Lambda is a software package that simulates gene genealogies under multiple merger and Kingman's coalescent processes within species networks or species trees. Hybrid-Lambda allows different coalescent processes to be specified for different populations, and allows for time to be converted between generations and coalescent units, by specifying a population size for each population. In addition, Hybrid-Lambda can generate simulated datasets, assuming the infinitely many sites mutation model, and compute the F ST statistic. As an illustration, we apply Hybrid-Lambda to infer the time of subdivision of certain marine invertebrates under different coalescent processes. Hybrid-Lambda makes it possible to investigate biogeographic concordance among high fecundity species exhibiting skewed offspring distribution.

  2. Biomass Production of Some Salt Tolerant Tree Species Grown in Different Ecological Zones of Pakistan

    International Nuclear Information System (INIS)

    Mahmood, K.; Chughtai, M. I.; Awan, A. R.; Waheed, R. A.

    2016-01-01

    A study was carried out to evaluate the biomass production potential of salt tolerant tree species grown in saline environments. For this purpose, 5 sites near Badin, Gawadar, Lahore, Faisalabad and Peshawar in different ecological zones of Pakistan were selected. Plantations of 7 tree species common to all sites including Eucalyptus camaldulensis, Phoenix dactylifera, Acacia nilotica, Acacia ampliceps, Prosopis juliflora, Casurinaobesa and Tamarix aphylla were selected for non-destructive biomass measurements. Five trees from each species at each site were assessed for plant height, girth at breast height, canopy area, canopy shape and number of branches. For destructive biomass estimation, six trees of four species (Eucalyptus camaldulensis, Acacia nilotica, Prosopis juliflora and Tamarix aphylla) were harvested at two sites near Lahore and Faisalabad. Biomass of whole tree and its components like stem, branches, twigs, leaves and fruits were determined. Soil and water resources of these sites were also characterized. Results indicated that E. camaldulensis produced maximum average biomass 329 kg in 81/2 years at soil salinity (EC 1:1) 8.5 to 9.4 dS m/sup -1/ and T. aphylla produced 188 kg at soil salinity 12.8 dS m/sup -1/ in 91/2 years. A. nilotica produced biomass 187 kg at 16.9 dS m/sup -1/ in 10 years at Faisalabad; while at Lahore, 369 kg in 18 years under soil salinity level 7.3 dS m/sup -1/. P. juliflora produced minimum biomass 123 kg at soil salinity 7.1 dS m/sup -1/ in 8 years at Lahore and 278 kg at soil salinity 17.2 dS m/sup -1/ in 16 years at Faisalabad. Both soil and water quality was comparatively better at Gawadar and Faisalabad than other sites. Overall, it is concluded that studied tree species are good performer on salt-affected soils and can make saline areas productive. (author)

  3. Study of Tree and Shrub Species Diversity in Forestry Plans with Different Forest Management

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    nooreddin noorian

    2017-12-01

    Full Text Available The aim of this research was to investigate the diversity of tree and shrub species in forestry plan in a watershed and in almost the same ecological conditions but different in forest management plan in the part of Golestan province forest. To this end, the 6675 hectares of the watershed number of 85 in 5 different plans in series one (30-year forestry plan with University Scientific Management, series two Doctor Bahramnia (without implementation and protection, series four Shamoshak, Naharkhoran plan and Sad Abad plan were selected. Inventory grid was designed by a systematic cluster sampling method with 239 circle plots in the study area. In each sample, species composition and diameter at breast height of trees and shrubs were measured. Species diversity in different series, were performed by calculating the heterogeneity indices, species richness and evenness. Statistical analysis of significant differences between the values of biodiversity of woody species among different series was performed by Duncan’s test. The results showed that biodiversity of woody species in the one and two series of Shastkalateh forest under academic management was better than other plans and forestry plan of Naharkhoran is in an unfavorable situation in terms of diversity indices.

  4. Physiological minimum temperatures for root growth in seven common European broad-leaved tree species.

    Science.gov (United States)

    Schenker, Gabriela; Lenz, Armando; Körner, Christian; Hoch, Günter

    2014-03-01

    Temperature is the most important factor driving the cold edge distribution limit of temperate trees. Here, we identified the minimum temperatures for root growth in seven broad-leaved tree species, compared them with the species' natural elevational limits and identified morphological changes in roots produced near their physiological cold limit. Seedlings were exposed to a vertical soil-temperature gradient from 20 to 2 °C along the rooting zone for 18 weeks. In all species, the bulk of roots was produced at temperatures above 5 °C. However, the absolute minimum temperatures for root growth differed among species between 2.3 and 4.2 °C, with those species that reach their natural distribution limits at higher elevations also tending to have lower thermal limits for root tissue formation. In all investigated species, the roots produced at temperatures close to the thermal limit were pale, thick, unbranched and of reduced mechanical strength. Across species, the specific root length (m g(-1) root) was reduced by, on average, 60% at temperatures below 7 °C. A significant correlation of minimum temperatures for root growth with the natural high elevation limits of the investigated species indicates species-specific thermal requirements for basic physiological processes. Although these limits are not necessarily directly causative for the upper distribution limit of a species, they seem to belong to a syndrome of adaptive processes for life at low temperatures. The anatomical changes at the cold limit likely hint at the mechanisms impeding meristematic activity at low temperatures.

  5. The diversity and richness of tree species of Tambang Sawah forest Kerinci-Seblat National Park Sumatra Indonesia

    Directory of Open Access Journals (Sweden)

    Agus Susatya

    2010-12-01

    Full Text Available The conservation of tropical ecosystem is increasingly relevant as the recent global warming and climate change generate serious impacts on human life. Tropical forest becomes an important ecosystem to fight global warming due to its capability to sequester atmospheric carbon and to mitigate climate change. It is very unfortunate that such a vital ecosystem has been severely subjected to conversion to both plantations and illegal loggings. The tropical ecosystem has long been recognized to have high species diversity, but very few individual trees per species. The latter is almost ignored, even though can certainly bring serious difficulties on tree conservation. The objectives of the research were to know the tree community structure of Tambang Sawah Forest, Kerinci-Seblat National Park, and to determine the rareness of tree species. A plot of 1 ha was established at Tambang Sawah, Kerinci-Seblat National Park, Lebong Regency. All trees with BDH of > 5 cm were collected their herbarium specimens, and identifi ed. The results showed that Tambang Sawah forest consists of 42 families, 94 genera, and 185 tree species/ha. It has 19.51% (8 families, and 26.82% (10 families respectively categorized as very rare and rare. The pattern also occurs at genus level, where both categories contribute to 81.91% (78 genera of the total genera. In species level, both are respectively 90 and 28 species, and altogether contribute to 63.78% of the total species. These values appeared higher than that of the other forests in Bengkulu. Across taxon level, very rare and rare categories appeared to be an ecological attribute in Sumatran forests. This implies that the loss of single tree can cause the loss of entire family. The conservation works even turn into more difficult, because tropical trees are commonly diocious, even bisexual trees, they tend to be self-incompatible, and out-crossed, and required at least 200 mature trees to ensure sexual regeneration and to

  6. Modelling tree ring cellulose δ18O variations in two temperature-sensitive tree species from North and South America

    Directory of Open Access Journals (Sweden)

    A. Lavergne

    2017-11-01

    Full Text Available Oxygen isotopes in tree rings (δ18OTR are widely used to reconstruct past climates. However, the complexity of climatic and biological processes controlling isotopic fractionation is not yet fully understood. Here, we use the MAIDENiso model to decipher the variability in δ18OTR of two temperature-sensitive species of relevant palaeoclimatological interest (Picea mariana and Nothofagus pumilio and growing at cold high latitudes in North and South America. In this first modelling study on δ18OTR values in both northeastern Canada (53.86° N and western Argentina (41.10° S, we specifically aim at (1 evaluating the predictive skill of MAIDENiso to simulate δ18OTR values, (2 identifying the physical processes controlling δ18OTR by mechanistic modelling and (3 defining the origin of the temperature signal recorded in the two species. Although the linear regression models used here to predict daily δ18O of precipitation (δ18OP may need to be improved in the future, the resulting daily δ18OP values adequately reproduce observed (from weather stations and simulated (by global circulation model δ18OP series. The δ18OTR values of the two species are correctly simulated using the δ18OP estimation as MAIDENiso input, although some offset in mean δ18OTR levels is observed for the South American site. For both species, the variability in δ18OTR series is primarily linked to the effect of temperature on isotopic enrichment of the leaf water. We show that MAIDENiso is a powerful tool for investigating isotopic fractionation processes but that the lack of a denser isotope-enabled monitoring network recording oxygen fractionation in the soil–vegetation–atmosphere compartments limits our capacity to decipher the processes at play. This study proves that the eco-physiological modelling of δ18OTR values is necessary to interpret the recorded climate signal more reliably.

  7. Identification of endangered or threatened Costa Rican tree species by wood anatomy and fluorescence activity.

    Science.gov (United States)

    Moya, Róger; Wiemann, Michael C; Olivares, Carlos

    2013-09-01

    A total of 45 native Costa Rican tree species are threatened or in danger of extinction, but the Convention on International Trade Endangered Species (CITES) includes only eight of these in its Appendices. However, the identification of other species based on their wood anatomy is limited. The present study objective was to describe and to compare wood anatomy and fluorescence activity in some endangered or threatened species of Costa Rica. A total of 45 (22 endangered and 23 threatened with extinction) wood samples of these species, from the xylaria of the Instituto Tecnológico de Costa Rica and the Forest Products Laboratory in Madison, Wisconsin, were examined. Surface fluorescence was positive in eight species, water extract fluorescence was positive in six species and ethanol extract fluorescence was positive in 24 species. Almost all species were diffuse porous except for occasional (Cedrela odorata, C. fissilis, Cordia gerascanthus) or regular (C. salvadorensis and C. tonduzii) semi-ring porosity. A dendritic vessel arrangement was found in Sideroxylon capari, and pores were solitary in Guaiacum sanctum and Vantanea barbourii. Vessel element length was shortest in Guaiacum sanctum and longest in Humiriastrum guianensis, Minquartia guianensis and Vantanea barbourii. Finally, anatomical information and fluorescence activity were utilized to construct an identification key of species, in which fluorescence is a feature used in identification.

  8. Identification of endangered or threatened Costa Rican tree species by wood anatomy and fluorescence activity

    Directory of Open Access Journals (Sweden)

    Róger Moya

    2013-09-01

    Full Text Available A total of 45 native Costa Rican tree species are threatened or in danger of extinction, but the Convention on International Trade Endangered Species (CITES includes only eight of these in its Appendices. However, the identification of other species based on their wood anatomy is limited. The present study objective was to describe and to compare wood anatomy and fluorescence activity in some endangered or threatened species of Costa Rica. A total of 45 (22 endangered and 23 threatened with extinction wood samples of these species, from the xylaria of the Instituto Tecnológico de Costa Rica and the Forest Products Laboratory in Madison, Wisconsin, were examined. Surface fluorescence was positive in eight species, water extract fluorescence was positive in six species and ethanol extract fluorescence was positive in 24 species. Almost all species were diffuse porous except for occasional (Cedrela odorata, C. fissilis, Cordia gerascanthus or regular (C. salvadorensis and C. tonduzii semi-ring porosity. A dendritic vessel arrangement was found in Sideroxylon capari, and pores were solitary in Guaiacum sanctum and Vantanea barbourii. Vessel element length was shortest in Guaiacum sanctum and longest in Humiriastrum guianensis, Minquartia guianensis and Vantanea barbourii. Finally, anatomical information and fluorescence activity were utilized to construct an identification key of species, in which fluorescence is a feature used in identification.

  9. Tree species classification using within crown localization of waveform LiDAR attributes

    Science.gov (United States)

    Blomley, Rosmarie; Hovi, Aarne; Weinmann, Martin; Hinz, Stefan; Korpela, Ilkka; Jutzi, Boris

    2017-11-01

    Since forest planning is increasingly taking an ecological, diversity-oriented perspective into account, remote sensing technologies are becoming ever more important in assessing existing resources with reduced manual effort. While the light detection and ranging (LiDAR) technology provides a good basis for predictions of tree height and biomass, tree species identification based on this type of data is particularly challenging in structurally heterogeneous forests. In this paper, we analyse existing approaches with respect to the geometrical scale of feature extraction (whole tree, within crown partitions or within laser footprint) and conclude that currently features are always extracted separately from the different scales. Since multi-scale approaches however have proven successful in other applications, we aim to utilize the within-tree-crown distribution of within-footprint signal characteristics as additional features. To do so, a spin image algorithm, originally devised for the extraction of 3D surface features in object recognition, is adapted. This algorithm relies on spinning an image plane around a defined axis, e.g. the tree stem, collecting the number of LiDAR returns or mean values of returns attributes per pixel as respective values. Based on this representation, spin image features are extracted that comprise only those components of highest variability among a given set of library trees. The relative performance and the combined improvement of these spin image features with respect to non-spatial statistical metrics of the waveform (WF) attributes are evaluated for the tree species classification of Scots pine (Pinus sylvestris L.), Norway spruce (Picea abies (L.) Karst.) and Silver/Downy birch (Betula pendula Roth/Betula pubescens Ehrh.) in a boreal forest environment. This evaluation is performed for two WF LiDAR datasets that differ in footprint size, pulse density at ground, laser wavelength and pulse width. Furthermore, we evaluate the

  10. Tree Species Classification in Temperate Forests Using Formosat-2 Satellite Image Time Series

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    David Sheeren

    2016-09-01

    Full Text Available Mapping forest composition is a major concern for forest management, biodiversity assessment and for understanding the potential impacts of climate change on tree species distribution. In this study, the suitability of a dense high spatial resolution multispectral Formosat-2 satellite image time-series (SITS to discriminate tree species in temperate forests is investigated. Based on a 17-date SITS acquired across one year, thirteen major tree species (8 broadleaves and 5 conifers are classified in a study area of southwest France. The performance of parametric (GMM and nonparametric (k-NN, RF, SVM methods are compared at three class hierarchy levels for different versions of the SITS: (i a smoothed noise-free version based on the Whittaker smoother; (ii a non-smoothed cloudy version including all the dates; (iii a non-smoothed noise-free version including only 14 dates. Noise refers to pixels contaminated by clouds and cloud shadows. The results of the 108 distinct classifications show a very high suitability of the SITS to identify the forest tree species based on phenological differences (average κ = 0 . 93 estimated by cross-validation based on 1235 field-collected plots. SVM is found to be the best classifier with very close results from the other classifiers. No clear benefit of removing noise by smoothing can be observed. Classification accuracy is even improved using the non-smoothed cloudy version of the SITS compared to the 14 cloud-free image time series. However conclusions of the results need to be considered with caution because of possible overfitting. Disagreements also appear between the maps produced by the classifiers for complex mixed forests, suggesting a higher classification uncertainty in these contexts. Our findings suggest that time-series data can be a good alternative to hyperspectral data for mapping forest types. It also demonstrates the potential contribution of the recently launched Sentinel-2 satellite for

  11. Non-labile Soil Nitrogen Retention beneath Three Tree Species in a Tropical Plantation

    Science.gov (United States)

    Jason P. Kaye; Dan Binkley; Xiaoming Zou

    2002-01-01

    Soil organic matter is the largest sink for N additions to forests. Species composition may affect soilNretention by altering the amount or proportion of added N stored in non-labile organic pools. We measured 15N tracer retention in labile and non-labile pools of surface (0–20 cm) mineral soils, 7 yr after the tracer was applied to a 9 yr-old Puerto Rican tree...

  12. [Research on identification of species of fruit trees by spectral analysis].

    Science.gov (United States)

    Xing, Dong-Xing; Chang, Qing-Rui

    2009-07-01

    Using the spectral reflectance data (R2) of canopies, the present paper identifies seven species of fruit trees bearing fruit in the fruit mature period. Firstly, it compares the fruit tree species identification capability of six kinds of satellite sensors and four kinds of vegetation index through re-sampling the spectral data with six kinds of pre-defined filter function and the related data processing of calculating vegetation indexes. Then, it structures a BP neural network model for identifying seven species of fruit trees on the basis of choosing the best transformation of R(lambda) and optimizing the model parameters. The main conclusions are: (1) the order of the identification capability of the six kinds of satellite sensors from strong to weak is: MODIS, ASTER, ETM+, HRG, QUICKBIRD and IKONOS; (2) among the four kinds of vegetation indexes, the identification capability of RVI is the most powerful, the next is NDVI, while the identification capability of SAVI or DVI is relatively weak; (3) The identification capability of RVI and NDVI calculated with the reflectance of near-infrared and red channels of ETM+ or MODIS sensor is relatively powerful; (4) Among R(lambda) and its 22 kinds of transformation data, d1 [log(1/R(lambda))](derivative gap is set 9 nm) is the best transformation for structuring BP neural network model; (5) The paper structures a 3-layer BP neural network model for identifying seven species of fruit trees using the best transformation of R(lambda) which is d1 [log(1/R(lambda))](derivative gap is set 9 nm).

  13. Identification of colletotrichum species causing anthracnose on tahiti lime, tree tomato and mango

    OpenAIRE

    Martínez, Erika P.; Hío, Juan C.; Osorio1, Jairo A.; Torres, María F.

    2009-01-01

    In Colombia, citrus, tree tomato and mango crops are likely to suffer considerable losses from anthracnose caused by several Colletotrichum species, which were identified by the present study on infected organs of the three fruit crops, sampled in different regions of the country. Identification was based on their morphological and molecular characteristics, as well as on fungicide (benomyl and copper hydroxide) sensitivity and pathogenicity tests. The latter assessed infectivity on both the ...

  14. Chemical composition and fuel wood characteristics of fast growing tree species in India

    Science.gov (United States)

    Chauhan, S. K.; Soni, R.

    2012-04-01

    India is one of the growing economy in the world and energy is a critical input to sustain the growth of development. Country aims at security and efficiency of energy. Though fossil fuel will continue to play a dominant role in energy scenario but country is committed to global environmental well being thus stressing on environment friendly technologies. Concerns of energy security in this changing climatic situation have led to increasing support for the development of new renewable source of energy. Government though is determined to facilitate bio-energy and many projects have been established but initial after-affects more specifically on the domestic fuelwood are evident. Even the biomass power generating units are facing biomass crisis and accordingly the prices are going up. The CDM projects are supporting the viability of these units resultantly the Indian basket has a large number of biomass projects (144 out of total 506 with 28 per cent CERs). The use for fuelwood as a primary source of energy for domestic purpose by the poor people (approx. 80 per cent) and establishment of bio-energy plants may lead to deforestation to a great extent and only solution to this dilemma is to shift the wood harvest from the natural forests to energy plantations. However, there is conspicuous lack of knowledge with regards to the fuelwood characteristics of fast growing tree species for their selection for energy plantations. The calorific value of the species is important criteria for selection for fuel but it is affected by the proportions of biochemical constituents present in them. The aim of the present work was to study the biomass production, calorific value and chemical composition of different short rotation tree species. The study was done from the perspective of using the fast growing tree species for energy production at short rotation and the study concluded that short rotation tree species like Gmelina arborea, Eucalyptus tereticornis, Pongamia pinnata

  15. First Experience with Sentinel-2 Data for Crop and Tree Species Classifications in Central Europe

    Directory of Open Access Journals (Sweden)

    Markus Immitzer

    2016-02-01

    Full Text Available The study presents the preliminary results of two classification exercises assessing the capabilities of pre-operational (August 2015 Sentinel-2 (S2 data for mapping crop types and tree species. In the first case study, an S2 image was used to map six summer crop species in Lower Austria as well as winter crops/bare soil. Crop type maps are needed to account for crop-specific water use and for agricultural statistics. Crop type information is also useful to parametrize crop growth models for yield estimation, as well as for the retrieval of vegetation biophysical variables using radiative transfer models. The second case study aimed to map seven different deciduous and coniferous tree species in Germany. Detailed information about tree species distribution is important for forest management and to assess potential impacts of climate change. In our S2 data assessment, crop and tree species maps were produced at 10 m spatial resolution by combining the ten S2 spectral channels with 10 and 20 m pixel size. A supervised Random Forest classifier (RF was deployed and trained with appropriate ground truth. In both case studies, S2 data confirmed its expected capabilities to produce reliable land cover maps. Cross-validated overall accuracies ranged between 65% (tree species and 76% (crop types. The study confirmed the high value of the red-edge and shortwave infrared (SWIR bands for vegetation mapping. Also, the blue band was important in both study sites. The S2-bands in the near infrared were amongst the least important channels. The object based image analysis (OBIA and the classical pixel-based classification achieved comparable results, mainly for the cropland. As only single date acquisitions were available for this study, the full potential of S2 data could not be assessed. In the future, the two twin S2 satellites will offer global coverage every five days and therefore permit to concurrently exploit unprecedented spectral and temporal

  16. Participatory Selection of Tree Species for Agroforestry on Sloping Land in North Korea

    Directory of Open Access Journals (Sweden)

    Jun He

    2015-11-01

    Full Text Available The action research project reported in this article used a participatory approach to select trees for sloping-land agroforestry as a key strategy for forest ecosystem restoration and local livelihood development. It was the first such project in the Democratic People’s Republic of Korea (North Korea to use a participatory approach, empowering local user groups to develop their preferences for agroforestry species. Local knowledge of the multiple functions of agroforestry species ensured that the tree selection criteria included the value of timber, fruit, fodder, oil, medicines, fuelwood, and erosion control. Involving 67 farmers from 3 counties, this participatory selection process resulted in Prunus armeniaca, Castanea crenata, and Ziziphus jujuba being selected as the top 3 species for the development of sloping-land agroforestry in North Hwanghae Province. These trees embody what the region’s farmers value most: erosion control, production of fruit, and economic value. The participatory approach in agroforestry could help to meet both local needs for food security and the national objective of environmental conservation and has great potential for wide adaptation in North Korea and beyond.

  17. Long-term Seedling Dynamics of Tree Species in a Subtropical Rain Forest, Taiwan

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    Chia-Hao Chang-Yang

    2013-03-01

    Full Text Available Knowledge of demographical rates at seedling stage is critical for understanding forest composition and dynamics. We monitored the seedling dynamics of tree species in a subtropical rain forest in Fushan, northern Taiwan (24°45’ N, 121°35’ E during an 8-yr period (2003–2010. There were great temporal fluctuations in the seedling density, which might be largely driven by the pulses of seedling recruitment. Interspecific variation in the seedling abundance, however, was not related to the reproductive adult abundance. Previous studies showed that frequent typhoon disturbances contributed to the high canopy openness and high understory light availability at Fushan, which might benefit tree regeneration. But our results do not support this idea. Most of the newly recruited seedlings died within six months and only grew 1.55 ± 0.20 cm per year, which might be suppressed by the dense understory vegetation. Our results suggested that the majority of tree species in Fushan were recruitment limited, which might have important consequences for species coexistence. High temporal variability in recruitment density and low growth rates of seedlings emphasize the importance of long-term studies to our understandings of forest dynamics.

  18. Early Response of Soil Properties and Function to Riparian Rainforest Restoration

    Science.gov (United States)

    Gageler, Rose; Bonner, Mark; Kirchhof, Gunnar; Amos, Mark; Robinson, Nicole; Schmidt, Susanne; Shoo, Luke P.

    2014-01-01

    Reforestation of riparian zones is increasingly practiced in many regions for purposes of biodiversity conservation, bank stabilisation, and improvement in water quality. This is in spite of the actual benefits of reforestation for recovering underlying soil properties and function remaining poorly understood. Here we compare remnant riparian rainforest, pasture and reforestation plantings aged 2–20 years in an Australian subtropical catchment on ferrosols to determine the extent to which reforestation restores key soil properties. Of the nine soil attributes measured (total nitrogen, nitrate and ammonium concentrations, net nitrification and ammonification rates, organic carbon, bulk density, fine root biomass and water infiltration rates), only infiltration rates were significantly lower in pasture than remnant riparian rainforest. Within reforestation plantings, bulk density decreased up to 1.4-fold and infiltration rates increased up to 60-fold with time post-reforestation. Our results suggest that the main outcome of belowground processes of early reforestation is the recovery of the soils' physical structure, with potential beneficial ecosystem services including reduced runoff, erosion and associated sediment and nutrient loads in waterways. We also demonstrate differential impacts of two commonly planted tree species on a subset of soil properties suggesting that preferential planting of select species could accelerate progress on specific restoration objectives. PMID:25117589

  19. Early response of soil properties and function to riparian rainforest restoration.

    Directory of Open Access Journals (Sweden)

    Rose Gageler

    Full Text Available Reforestation of riparian zones is increasingly practiced in many regions for purposes of biodiversity conservation, bank stabilisation, and improvement in water quality. This is in spite of the actual benefits of reforestation for recovering underlying soil properties and function remaining poorly understood. Here we compare remnant riparian rainforest, pasture and reforestation plantings aged 2-20 years in an Australian subtropical catchment on ferrosols to determine the extent to which reforestation restores key soil properties. Of the nine soil attributes measured (total nitrogen, nitrate and ammonium concentrations, net nitrification and ammonification rates, organic carbon, bulk density, fine root biomass and water infiltration rates, only infiltration rates were significantly lower in pasture than remnant riparian rainforest. Within reforestation plantings, bulk density decreased up to 1.4-fold and infiltration rates increased up to 60-fold with time post-reforestation. Our results suggest that the main outcome of belowground processes of early reforestation is the recovery of the soils' physical structure, with potential beneficial ecosystem services including reduced runoff, erosion and associated sediment and nutrient loads in waterways. We also demonstrate differential impacts of two commonly planted tree species on a subset of soil properties suggesting that preferential planting of select species could accelerate progress on specific restoration objectives.

  20. First Experience with Sentinel-2 Data for Crop and Tree Species Classifications in Central Europe

    OpenAIRE

    Markus Immitzer; Francesco Vuolo; Clement Atzberger

    2016-01-01

    The study presents the preliminary results of two classification exercises assessing the capabilities of pre-operational (August 2015) Sentinel-2 (S2) data for mapping crop types and tree species. In the first case study, an S2 image was used to map six summer crop species in Lower Austria as well as winter crops/bare soil. Crop type maps are needed to account for crop-specific water use and for agricultural statistics. Crop type information is also useful to parametrize crop growth models fo...

  1. Fruit production in three masting tree species does not rely on stored carbon reserves.

    Science.gov (United States)

    Hoch, Günter; Siegwolf, Rolf T W; Keel, Sonja G; Körner, Christian; Han, Qingmin

    2013-03-01

    Fruiting is typically considered to massively burden the seasonal carbon budget of trees. The cost of reproduction has therefore been suggested as a proximate factor explaining observed mast-fruiting patterns. Here, we used a large-scale, continuous (13)C labeling of mature, deciduous trees in a temperate Swiss forest to investigate to what extent fruit formation in three species with masting reproduction behavior (Carpinus betulus, Fagus sylvatica, Quercus petraea) relies on the import of stored carbon reserves. Using a free-air CO2 enrichment system, we exposed trees to (13)C-depleted CO2 during 8 consecutive years. By the end of this experiment, carbon reserve pools had significantly lower δ(13)C values compared to control trees. δ(13)C analysis of new biomass during the first season after termination of the CO2 enrichment allowed us to distinguish the sources of built-in carbon (old carbon reserves vs. current assimilates). Flowers and expanding leaves carried a significant (13)C label from old carbon stores. In contrast, fruits and vegetative infructescence tissues were exclusively produced from current, unlabeled photoassimilates in all three species, including F. sylvatica, which had a strong masting season. Analyses of δ(13)C in purified starch from xylem of fruit-bearing shoots revealed a complete turn-over of starch during the season, likely due to its usage for bud break. This study is the first to directly demonstrate that fruiting is independent from old carbon reserves in masting trees, with significant implications for mechanistic models that explain mast seeding.

  2. The influence of recent climate change on tree height growth differs with species and spatial environment.

    Science.gov (United States)

    Messaoud, Yassine; Chen, Han Y H

    2011-02-16

    Tree growth has been reported to increase in response to recent global climate change in controlled and semi-controlled experiments, but few studies have reported response of tree growth to increased temperature and atmospheric carbon dioxide (CO₂) concentration in natural environments. This study addresses how recent global climate change has affected height growth of trembling aspen (Populus tremuloides Michx) and black spruce (Picea mariana Mill B.S.) in their natural environments. We sampled 145 stands dominated by aspen and 82 dominated by spruce over the entire range of their distributions in British Columbia, Canada. These stands were established naturally after fire between the 19th and 20th centuries. Height growth was quantified as total heights of sampled dominant and co-dominant trees at breast-height age of 50 years. We assessed the relationships between 50-year height growth and environmental factors at both spatial and temporal scales. We also tested whether the tree growth associated with global climate change differed with spatial environment (latitude, longitude and elevation). As expected, height growth of both species was positively related to temperature variables at the regional scale and with soil moisture and nutrient availability at the local scale. While height growth of trembling aspen was not significantly related to any of the temporal variables we examined, that of black spruce increased significantly with stand establishment date, the anomaly of the average maximum summer temperature between May-August, and atmospheric CO₂ concentration, but not with the Palmer Drought Severity Index. Furthermore, the increase of spruce height growth associated with recent climate change was higher in the western than in eastern part of British Columbia. This study demonstrates that the response of height growth to recent climate change, i.e., increasing temperature and atmospheric CO₂ concentration, did not only differ with tree species, but

  3. Multispecies coalescent analysis of the early diversification of neotropical primates: phylogenetic inference under strong gene trees/species tree conflict.

    Science.gov (United States)

    Schrago, Carlos G; Menezes, Albert N; Furtado, Carolina; Bonvicino, Cibele R; Seuanez, Hector N

    2014-11-05

    Neotropical primates (NP) are presently distributed in the New World from Mexico to northern Argentina, comprising three large families, Cebidae, Atelidae, and Pitheciidae, consequently to their diversification following their separation from Old World anthropoids near the Eocene/Oligocene boundary, some 40 Ma. The evolution of NP has been intensively investigated in the last decade by studies focusing on their phylogeny and timescale. However, despite major efforts, the phylogenetic relationship between these three major clades and the age of their last common ancestor are still controversial because these inferences were based on limited numbers of loci and dating analyses that did not consider the evolutionary variation associated with the distribution of gene trees within the proposed phylogenies. We show, by multispecies coalescent analyses of selected genome segments, spanning along 92,496,904 bp that the early diversification of extant NP was marked by a 2-fold increase of their effective population size and that Atelids and Cebids are more closely related respective to Pitheciids. The molecular phylogeny of NP has been difficult to solve because of population-level phenomena at the early evolution of the lineage. The association of evolutionary variation with the distribution of gene trees within proposed phylogenies is crucial for distinguishing the mean genetic divergence between species (the mean coalescent time between loci) from speciation time. This approach, based on extensive genomic data provided by new generation DNA sequencing, provides more accurate reconstructions of phylogenies and timescales for all organisms. © The Author(s) 2014. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

  4. Effects of tree species and wood particle size on the properties of cement-bonded particleboard manufacturing from tree prunings.

    Science.gov (United States)

    Nasser, Ramadan A; Al-Mefarrej, H A; Abdel-Aal, M A; Alshahrani, T S

    2014-09-01

    This study investigated the possibility of using the prunings of six locally grown tree species in Saudi Arabia for cement-bonded particleboard (CBP) production. Panels were made using four different wood particle sizes and a constant wood/cement ratio (1/3 by weight) and target density (1200 kg/m3). The mechanical properties and dimensional stability of the produced panels were determined. The interfacial area and distribution of the wood particles in cement matrix were also investigated by scanning electron microscopy. The results revealed that the panels produced from these pruning materials at a target density of 1200 kg m(-3) meet the strength and dimensional stability requirements of the commercial CBP panels. The mean moduli of rupture and elasticity (MOR and MOE) ranged from 9.68 to 11.78 N mm2 and from 3952 to 5667 N mm2, respectively. The mean percent water absorption for twenty four hours (WA24) ranged from 12.93% to 23.39%. Thickness swelling values ranged from 0.62% to 1.53%. For CBP panels with high mechanical properties and good dimensional stability, mixed-size or coarse particles should be used. Using the tree prunings for CBPs production may help to solve the problem of getting rid of these residues by reducing their negative effects on environment, which are caused by poor disposal of such materials through direct combustion process and appearance of black cloud and then the impact on human health or the random accumulation and its indirect effects on the environment.

  5. Impact of deep coalescence on the reliability of species tree inference from different types of DNA markers in mammals.

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    Alejandro Sánchez-Gracia

    Full Text Available An important challenge for phylogenetic studies of closely related species is the existence of deep coalescence and gene tree heterogeneity. However, their effects can vary between species and they are often neglected in phylogenetic analyses. In addition, a practical problem in the reconstruction of shallow phylogenies is to determine the most efficient set of DNA markers for a reliable estimation. To address these questions, we conducted a multilocus simulation study using empirical values of nucleotide diversity and substitution rates obtained from a wide range of mammals and evaluated the performance of both gene tree and species tree approaches to recover the known speciation times and topological relationships. We first show that deep coalescence can be a serious problem, more than usually assumed, for the estimation