Fabrication of free-standing replicas of fragile, laminar, chitinous biotemplates

Energy Technology Data Exchange (ETDEWEB)

Lakhtakia, Akhlesh; Motyka, Michael A [Materials Research Institute and Department of Engineering Science and Mechanics, Pennsylvania State University, University Park, PA 16802 (United States); MartIn-Palma, Raul J; Pantano, Carlo G [Materials Research Institute and Department of Materials Science and Engineering, Pennsylvania State University, University Park, PA 16802 (United States)], E-mail: akhlesh@psu.edu

2009-09-01

The conformal-evaporated-film-by-rotation technique, followed by the dissolution of chitin in an aqueous solution of orthophosphoric acid, can be used to fabricate free-standing replicas of fragile, laminar, chitinous biotemplates. This novel approach was demonstrated using butterfly wings as biotemplates and GeSeSb chalcogenide glass for replicas. (communication)

Fabrication of free-standing replicas of fragile, laminar, chitinous biotemplates

International Nuclear Information System (INIS)

Lakhtakia, Akhlesh; Motyka, Michael A; MartIn-Palma, Raul J; Pantano, Carlo G

2009-01-01

The conformal-evaporated-film-by-rotation technique, followed by the dissolution of chitin in an aqueous solution of orthophosphoric acid, can be used to fabricate free-standing replicas of fragile, laminar, chitinous biotemplates. This novel approach was demonstrated using butterfly wings as biotemplates and GeSeSb chalcogenide glass for replicas. (communication)

Replica approach to mean-variance portfolio optimization

Science.gov (United States)

Varga-Haszonits, Istvan; Caccioli, Fabio; Kondor, Imre

2016-12-01

We consider the problem of mean-variance portfolio optimization for a generic covariance matrix subject to the budget constraint and the constraint for the expected return, with the application of the replica method borrowed from the statistical physics of disordered systems. We find that the replica symmetry of the solution does not need to be assumed, but emerges as the unique solution of the optimization problem. We also check the stability of this solution and find that the eigenvalues of the Hessian are positive for r  =  N/T  optimal in-sample variance is found to vanish at the critical point inversely proportional to the divergent estimation error.

Patrol Detection for Replica Attacks on Wireless Sensor Networks

OpenAIRE

Wang, Liang-Min; Shi, Yang

2011-01-01

Replica attack is a critical concern in the security of wireless sensor networks. We employ mobile nodes as patrollers to detect replicas distributed in different zones in a network, in which a basic patrol detection protocol and two detection algorithms for stationary and mobile modes are presented. Then we perform security analysis to discuss the defense strategies against the possible attacks on the proposed detection protocol. Moreover, we show the advantages of the proposed protocol by d...

Reconstruction of Monte Carlo replicas from Hessian parton distributions

Energy Technology Data Exchange (ETDEWEB)

Hou, Tie-Jiun [Department of Physics, Southern Methodist University,Dallas, TX 75275-0181 (United States); Gao, Jun [INPAC, Shanghai Key Laboratory for Particle Physics and Cosmology,Department of Physics and Astronomy, Shanghai Jiao-Tong University, Shanghai 200240 (China); High Energy Physics Division, Argonne National Laboratory,Argonne, Illinois, 60439 (United States); Huston, Joey [Department of Physics and Astronomy, Michigan State University,East Lansing, MI 48824 (United States); Nadolsky, Pavel [Department of Physics, Southern Methodist University,Dallas, TX 75275-0181 (United States); Schmidt, Carl; Stump, Daniel [Department of Physics and Astronomy, Michigan State University,East Lansing, MI 48824 (United States); Wang, Bo-Ting; Xie, Ke Ping [Department of Physics, Southern Methodist University,Dallas, TX 75275-0181 (United States); Dulat, Sayipjamal [Department of Physics and Astronomy, Michigan State University,East Lansing, MI 48824 (United States); School of Physics Science and Technology, Xinjiang University,Urumqi, Xinjiang 830046 (China); Center for Theoretical Physics, Xinjiang University,Urumqi, Xinjiang 830046 (China); Pumplin, Jon; Yuan, C.P. [Department of Physics and Astronomy, Michigan State University,East Lansing, MI 48824 (United States)

2017-03-20

We explore connections between two common methods for quantifying the uncertainty in parton distribution functions (PDFs), based on the Hessian error matrix and Monte-Carlo sampling. CT14 parton distributions in the Hessian representation are converted into Monte-Carlo replicas by a numerical method that reproduces important properties of CT14 Hessian PDFs: the asymmetry of CT14 uncertainties and positivity of individual parton distributions. The ensembles of CT14 Monte-Carlo replicas constructed this way at NNLO and NLO are suitable for various collider applications, such as cross section reweighting. Master formulas for computation of asymmetric standard deviations in the Monte-Carlo representation are derived. A correction is proposed to address a bias in asymmetric uncertainties introduced by the Taylor series approximation. A numerical program is made available for conversion of Hessian PDFs into Monte-Carlo replicas according to normal, log-normal, and Watt-Thorne sampling procedures.

Multiscale implementation of infinite-swap replica exchange molecular dynamics.

Science.gov (United States)

Yu, Tang-Qing; Lu, Jianfeng; Abrams, Cameron F; Vanden-Eijnden, Eric

2016-10-18

Replica exchange molecular dynamics (REMD) is a popular method to accelerate conformational sampling of complex molecular systems. The idea is to run several replicas of the system in parallel at different temperatures that are swapped periodically. These swaps are typically attempted every few MD steps and accepted or rejected according to a Metropolis-Hastings criterion. This guarantees that the joint distribution of the composite system of replicas is the normalized sum of the symmetrized product of the canonical distributions of these replicas at the different temperatures. Here we propose a different implementation of REMD in which (i) the swaps obey a continuous-time Markov jump process implemented via Gillespie's stochastic simulation algorithm (SSA), which also samples exactly the aforementioned joint distribution and has the advantage of being rejection free, and (ii) this REMD-SSA is combined with the heterogeneous multiscale method to accelerate the rate of the swaps and reach the so-called infinite-swap limit that is known to optimize sampling efficiency. The method is easy to implement and can be trivially parallelized. Here we illustrate its accuracy and efficiency on the examples of alanine dipeptide in vacuum and C-terminal β-hairpin of protein G in explicit solvent. In this latter example, our results indicate that the landscape of the protein is a triple funnel with two folded structures and one misfolded structure that are stabilized by H-bonds.

Accuracy of three-dimensional printing for manufacturing replica teeth

OpenAIRE

Lee, Keun-Young; Cho, Jin-Woo; Chang, Na-Young; Chae, Jong-Moon; Kang, Kyung-Hwa; Kim, Sang-Cheol; Cho, Jin-Hyoung

2015-01-01

Objective Three-dimensional (3D) printing is a recent technological development that may play a significant role in orthodontic diagnosis and treatment. It can be used to fabricate skull models or study models, as well as to make replica teeth in autotransplantation or tooth impaction cases. The aim of this study was to evaluate the accuracy of fabrication of replica teeth made by two types of 3D printing technologies. Methods Fifty extracted molar teeth were selected as samples. They were sc...

The added value of the replica simulators in the exploitation of nuclear power plants; El valor anadido de los simuladores replica en la explotacion de las centrales nucleares

Energy Technology Data Exchange (ETDEWEB)

Diaz Giron, P. a.; Ortega, F.; Rivero, N.

2011-07-01

Nuclear power plants full scope replica simulators were in the past solely designed following operational personnel training criteria. Nevertheless, these simulators not only feature a high replica control room but also provide an accurate process response. Control room replica simulators are presently based on complex technological platforms permitting highest physical and functional fidelity, allowing to be used as versatile and value added tools in diverse plants operation and maintenance activities. In recent years. Tecnatom has extended the use of such simulators to different engineering applications. this article intends to identify the simulators use in training and other applications beyond training. (Author)

Internal structure analysis of particle-double network gels used in a gel organ replica

Science.gov (United States)

Abe, Mei; Arai, Masanori; Saito, Azusa; Sakai, Kazuyuki; Kawakami, Masaru; Furukawa, Hidemitsu

2016-04-01

In recent years, the fabrication of patient organ replicas using 3D printers has been attracting a great deal of attention in medical fields. However, the cost of these organ replicas is very high as it is necessary to employ very expensive 3D printers and printing materials. Here we present a new gel organ replica, of human kidney, fabricated with a conventional molding technique, using a particle-double network hydrogel (P-DN gel). The replica is transparent and has the feel of a real kidney. It is expected that gel organ replicas produced this way will be a useful tool for the education of trainee surgeons and clinical ultrasonography technologists. In addition to developing a gel organ replica, the internal structure of the P-DN gel used is also discussed. Because the P-DN gel has a complex structure comprised of two different types of network, it has not been possible to investigate them internally in detail. Gels have an inhomogeneous network structure. If it is able to get a more uniform structure, it is considered that this would lead to higher strength in the gel. In the present study we investigate the structure of P-DN gel, using the gel organ replica. We investigated the internal structure of P-DN gel using Scanning Microscopic Light Scattering (SMILS), a non-contacting and non-destructive.

Fast Optimal Replica Placement with Exhaustive Search Using Dynamically Reconfigurable Processor

Directory of Open Access Journals (Sweden)

Hidetoshi Takeshita

2011-01-01

Full Text Available This paper proposes a new replica placement algorithm that expands the exhaustive search limit with reasonable calculation time. It combines a new type of parallel data-flow processor with an architecture tuned for fast calculation. The replica placement problem is to find a replica-server set satisfying service constraints in a content delivery network (CDN. It is derived from the set cover problem which is known to be NP-hard. It is impractical to use exhaustive search to obtain optimal replica placement in large-scale networks, because calculation time increases with the number of combinations. To reduce calculation time, heuristic algorithms have been proposed, but it is known that no heuristic algorithm is assured of finding the optimal solution. The proposed algorithm suits parallel processing and pipeline execution and is implemented on DAPDNA-2, a dynamically reconfigurable processor. Experiments show that the proposed algorithm expands the exhaustive search limit by the factor of 18.8 compared to the conventional algorithm search limit running on a Neumann-type processor.

Calculation of absolute protein-ligand binding free energy using distributed replica sampling.

Science.gov (United States)

Rodinger, Tomas; Howell, P Lynne; Pomès, Régis

2008-10-21

Distributed replica sampling [T. Rodinger et al., J. Chem. Theory Comput. 2, 725 (2006)] is a simple and general scheme for Boltzmann sampling of conformational space by computer simulation in which multiple replicas of the system undergo a random walk in reaction coordinate or temperature space. Individual replicas are linked through a generalized Hamiltonian containing an extra potential energy term or bias which depends on the distribution of all replicas, thus enforcing the desired sampling distribution along the coordinate or parameter of interest regardless of free energy barriers. In contrast to replica exchange methods, efficient implementation of the algorithm does not require synchronicity of the individual simulations. The algorithm is inherently suited for large-scale simulations using shared or heterogeneous computing platforms such as a distributed network. In this work, we build on our original algorithm by introducing Boltzmann-weighted jumping, which allows moves of a larger magnitude and thus enhances sampling efficiency along the reaction coordinate. The approach is demonstrated using a realistic and biologically relevant application; we calculate the standard binding free energy of benzene to the L99A mutant of T4 lysozyme. Distributed replica sampling is used in conjunction with thermodynamic integration to compute the potential of mean force for extracting the ligand from protein and solvent along a nonphysical spatial coordinate. Dynamic treatment of the reaction coordinate leads to faster statistical convergence of the potential of mean force than a conventional static coordinate, which suffers from slow transitions on a rugged potential energy surface.

Patrol Detection for Replica Attacks on Wireless Sensor Networks

Directory of Open Access Journals (Sweden)

Yang Shi

2011-02-01

Full Text Available Replica attack is a critical concern in the security of wireless sensor networks. We employ mobile nodes as patrollers to detect replicas distributed in different zones in a network, in which a basic patrol detection protocol and two detection algorithms for stationary and mobile modes are presented. Then we perform security analysis to discuss the defense strategies against the possible attacks on the proposed detection protocol. Moreover, we show the advantages of the proposed protocol by discussing and comparing the communication cost and detection probability with some existing methods.

Replica methods for loopy sparse random graphs

International Nuclear Information System (INIS)

Coolen, ACC

2016-01-01

I report on the development of a novel statistical mechanical formalism for the analysis of random graphs with many short loops, and processes on such graphs. The graphs are defined via maximum entropy ensembles, in which both the degrees (via hard constraints) and the adjacency matrix spectrum (via a soft constraint) are prescribed. The sum over graphs can be done analytically, using a replica formalism with complex replica dimensions. All known results for tree-like graphs are recovered in a suitable limit. For loopy graphs, the emerging theory has an appealing and intuitive structure, suggests how message passing algorithms should be adapted, and what is the structure of theories describing spin systems on loopy architectures. However, the formalism is still largely untested, and may require further adjustment and refinement. (paper)

Microlens fabrication by replica molding of frozen laser-printed droplets

Science.gov (United States)

Surdo, Salvatore; Diaspro, Alberto; Duocastella, Martí

2017-10-01

In this work, we synergistically combine laser-induced forward transfer (LIFT) and replica molding for the fabrication of microlenses with control of their geometry and size independent of the material or substrate used. Our approach is based on a multistep process in which liquid microdroplets of an aqueous solution are first printed on a substrate by LIFT. Following a freezing step, the microdroplets are used as a master to fabricate a polydimethylsiloxane (PDMS) mold. A subsequent replica molding step enables the creation of microlenses and microlens arrays on arbitrary selected substrates and by using different curable polymers. Thus, our method combines the rapid fabrication capabilities of LIFT and the perfectively smooth surface quality of the generated microdroplets, with the advantages of replica molding in terms of parallelization and materials flexibility. We demonstrate our strategy by generating microlenses of different photocurable polymers and by characterizing their optical and morphological properties.

3D printed replicas for endodontic education.

Science.gov (United States)

Reymus, M; Fotiadou, C; Kessler, A; Heck, K; Hickel, R; Diegritz, C

2018-06-14

To assess the feasibility of producing artificial teeth for endodontic training using 3D printing technology, to analyse the accuracy of the printing process, and to evaluate the teeth by students when used during training. Sound extracted human teeth were selected, digitalized by cone beam computed tomography (CBCT) and appropriate software and finally reproduced by a stereolithographic printer. The printed teeth were scanned and compared with the original ones (trueness) and to one another (precision). Undergraduate dental students in the third and fourth years performed root canal treatment on printed molars and were subsequently asked to evaluate their experience with these compared to real teeth. The workflow was feasible for manufacturing 3D printed tooth replicas. The absolute deviation after printing (trueness) ranged from 50.9μm to 104.3μm. The values for precision ranged from 43.5μm to 68.2μm. Students reported great benefits in the use of the replicated teeth for training purposes. The presented workflow is feasible for any dental educational institution who has access to a CBCT unit and a stereolithographic printer. The accuracy of the printing process is suitable for the production of tooth replicas for endodontic training. Undergraduate students favoured the availability of these replicas and the fairness they ensured in training due to standardization. This article is protected by copyright. All rights reserved. This article is protected by copyright. All rights reserved.

Creating technical heritage object replicas in a virtual environment

Science.gov (United States)

Egorova, Olga; Shcherbinin, Dmitry

2016-03-01

The paper presents innovative informatics methods for creating virtual technical heritage replicas, which are of significant scientific and practical importance not only to researchers but to the public in general. By performing 3D modeling and animation of aircrafts, spaceships, architectural-engineering buildings, and other technical objects, the process of learning is achieved while promoting the preservation of the replicas for future generations. Modern approaches based on the wide usage of computer technologies attract a greater number of young people to explore the history of science and technology and renew their interest in the field of mechanical engineering.

Designed-walk replica-exchange method for simulations of complex systems

OpenAIRE

Urano, Ryo; Okamoto, Yuko

2015-01-01

We propose a new implementation of the replica-exchange method (REM) in which replicas follow a pre-planned route in temperature space instead of a random walk. Our method satisfies the detailed balance condition in the proposed route. The method forces tunneling events between the highest and lowest temperatures to happen with an almost constant period. The number of tunneling counts is proportional to that of the random-walk REM multiplied by the square root of moving distance in temperatur...

Standard practice for production and evaluation of field metallographic replicas

CERN Document Server

American Society for Testing and Materials. Philadelphia

2001-01-01

1.1 This practice covers recognized methods for the preparation and evaluation of cellulose acetate or plastic film replicas which have been obtained from metallographically prepared surfaces. It is designed for the evaluation of replicas to ensure that all significant features of a metallographically prepared surface have been duplicated and preserved on the replica with sufficient detail to permit both LM and SEM examination with optimum resolution and sensitivity. 1.2 This practice may be used as a controlling document in commercial situations. 1.3 The values stated in SI units are to be regarded as the standard. Inch-pound units given in parentheses are for information only. 1.4 This standard does not purport to address all of the safety concerns, if any, associated with its use. It is the responsibility of the user of this standard to establish appropriate safety and health practices and determine the applicability of regulatory limitations prior to use.

Replica-Based High-Performance Tuple Space Computing

DEFF Research Database (Denmark)

Andric, Marina; De Nicola, Rocco; Lluch Lafuente, Alberto

2015-01-01

of concurrency and data access. We investigate issues related to replica consistency, provide an operational semantics that guides the implementation of the language, and discuss the main synchronization mechanisms of our prototypical run-time framework. Finally, we provide a performance analysis, which includes...

A Novel General Chemistry Laboratory: Creation of Biomimetic Superhydrophobic Surfaces through Replica Molding

Science.gov (United States)

Verbanic, Samuel; Brady, Owen; Sanda, Ahmed; Gustafson, Carolina; Donhauser, Zachary J.

2014-01-01

Biomimetic replicas of superhydrophobic lotus and taro leaf surfaces can be made using polydimethylsiloxane. These replicas faithfully reproduce the microstructures of the leaves' surface and can be analyzed using contact angle goniometry, self-cleaning experiments, and optical microscopy. These simple and adaptable experiments were used to…

Automated magnification calibration in transmission electron microscopy using Fourier analysis of replica images

International Nuclear Information System (INIS)

Laak, Jeroen A.W.M. van der; Dijkman, Henry B.P.M.; Pahlplatz, Martin M.M.

2006-01-01

The magnification factor in transmission electron microscopy is not very precise, hampering for instance quantitative analysis of specimens. Calibration of the magnification is usually performed interactively using replica specimens, containing line or grating patterns with known spacing. In the present study, a procedure is described for automated magnification calibration using digital images of a line replica. This procedure is based on analysis of the power spectrum of Fourier transformed replica images, and is compared to interactive measurement in the same images. Images were used with magnification ranging from 1,000x to 200,000x. The automated procedure deviated on average 0.10% from interactive measurements. Especially for catalase replicas, the coefficient of variation of automated measurement was considerably smaller (average 0.28%) compared to that of interactive measurement (average 3.5%). In conclusion, calibration of the magnification in digital images from transmission electron microscopy may be performed automatically, using the procedure presented here, with high precision and accuracy

Kinetics from Replica Exchange Molecular Dynamics Simulations.

Science.gov (United States)

Stelzl, Lukas S; Hummer, Gerhard

2017-08-08

Transitions between metastable states govern many fundamental processes in physics, chemistry and biology, from nucleation events in phase transitions to the folding of proteins. The free energy surfaces underlying these processes can be obtained from simulations using enhanced sampling methods. However, their altered dynamics makes kinetic and mechanistic information difficult or impossible to extract. Here, we show that, with replica exchange molecular dynamics (REMD), one can not only sample equilibrium properties but also extract kinetic information. For systems that strictly obey first-order kinetics, the procedure to extract rates is rigorous. For actual molecular systems whose long-time dynamics are captured by kinetic rate models, accurate rate coefficients can be determined from the statistics of the transitions between the metastable states at each replica temperature. We demonstrate the practical applicability of the procedure by constructing master equation (Markov state) models of peptide and RNA folding from REMD simulations.

Synthesis and properties of ZnFe2O4 replica with biological hierarchical structure

International Nuclear Information System (INIS)

Liu, Hongyan; Guo, Yiping; Zhang, Yangyang; Wu, Fen; Liu, Yun; Zhang, Di

2013-01-01

Highlights: • ZFO replica with hierarchical structure was synthesized from butterfly wings. • Biotemplate has a significant impact on the properties of ZFO material. • Our method opens up new avenues for the synthesis of spinel ferrites. -- Abstract: ZnFe 2 O 4 replica with biological hierarchical structure was synthesized from Papilio paris by a sol–gel method followed by calcination. The crystallographic structure and morphology of the obtained samples were characterized by X-ray diffraction, field-emission scanning electron microscope, and transmittance electron microscope. The results showed that the hierarchical structures were retained in the ZFO replica of spinel structure. The magnetic behavior of such novel products was measured by a vibrating sample magnetometer. A superparamagnetism-like behavior was observed due to nanostructuration size effects. In addition, the ZFO replica with “quasi-honeycomb-like structure” showed a much higher specific capacitance of 279.4 F g −1 at 10 mV s −1 in comparison with ZFO powder of 137.3 F g −1 , attributing to the significantly increased surface area. These results demonstrated that ZFO replica is a promising candidate for novel magnetic devices and supercapacitors

A distance-aware replica adaptive data gathering protocol for Delay Tolerant Mobile Sensor Networks.

Science.gov (United States)

Feng, Yong; Gong, Haigang; Fan, Mingyu; Liu, Ming; Wang, Xiaomin

2011-01-01

In Delay Tolerant Mobile Sensor Networks (DTMSNs) that have the inherent features of intermitted connectivity and frequently changing network topology it is reasonable to utilize multi-replica schemes to improve the data gathering performance. However, most existing multi-replica approaches inject a large amount of message copies into the network to increase the probability of message delivery, which may drain each mobile node's limited battery supply faster and result in too much contention for the restricted resources of the DTMSN, so a proper data gathering scheme needs a trade off between the number of replica messages and network performance. In this paper, we propose a new data gathering protocol called DRADG (for Distance-aware Replica Adaptive Data Gathering protocol), which economizes network resource consumption through making use of a self-adapting algorithm to cut down the number of redundant replicas of messages, and achieves a good network performance by leveraging the delivery probabilities of the mobile sensors as main routing metrics. Simulation results have shown that the proposed DRADG protocol achieves comparable or higher message delivery ratios at the cost of the much lower transmission overhead than several current DTMSN data gathering schemes.

Coulomb replica-exchange method: handling electrostatic attractive and repulsive forces for biomolecules.

Science.gov (United States)

Itoh, Satoru G; Okumura, Hisashi

2013-03-30

We propose a new type of the Hamiltonian replica-exchange method (REM) for molecular dynamics (MD) and Monte Carlo simulations, which we refer to as the Coulomb REM (CREM). In this method, electrostatic charge parameters in the Coulomb interactions are exchanged among replicas while temperatures are exchanged in the usual REM. By varying the atom charges, the CREM overcomes free-energy barriers and realizes more efficient sampling in the conformational space than the REM. Furthermore, this method requires only a smaller number of replicas because only the atom charges of solute molecules are used as exchanged parameters. We performed Coulomb replica-exchange MD simulations of an alanine dipeptide in explicit water solvent and compared the results with those of the conventional canonical, replica exchange, and van der Waals REMs. Two force fields of AMBER parm99 and AMBER parm99SB were used. As a result, the CREM sampled all local-minimum free-energy states more frequently than the other methods for both force fields. Moreover, the Coulomb, van der Waals, and usual REMs were applied to a fragment of an amyloid-β peptide (Aβ) in explicit water solvent to compare the sampling efficiency of these methods for a larger system. The CREM sampled structures of the Aβ fragment more efficiently than the other methods. We obtained β-helix, α-helix, 3(10)-helix, β-hairpin, and β-sheet structures as stable structures and deduced pathways of conformational transitions among these structures from a free-energy landscape. Copyright © 2012 Wiley Periodicals, Inc.

Replicas Strategy and Cache Optimization of Video Surveillance Systems Based on Cloud Storage

Directory of Open Access Journals (Sweden)

Rongheng Li

2018-04-01

Full Text Available With the rapid development of video surveillance technology, especially the popularity of cloud-based video surveillance applications, video data begins to grow explosively. However, in the cloud-based video surveillance system, replicas occupy an amount of storage space. Also, the slow response to video playback constrains the performance of the system. In this paper, considering the characteristics of video data comprehensively, we propose a dynamic redundant replicas mechanism based on security levels that can dynamically adjust the number of replicas. Based on the location correlation between cameras, this paper also proposes a data cache strategy to improve the response speed of data reading. Experiments illustrate that: (1 our dynamic redundant replicas mechanism can save storage space while ensuring data security; (2 the cache mechanism can predict the playback behaviors of the users in advance and improve the response speed of data reading according to the location and time correlation of the front-end cameras; and (3 in terms of cloud-based video surveillance, our proposed approaches significantly outperform existing methods.

Replica analysis of partition-function zeros in spin-glass models

International Nuclear Information System (INIS)

Takahashi, Kazutaka

2011-01-01

We study the partition-function zeros in mean-field spin-glass models. We show that the replica method is useful to find the locations of zeros in a complex parameter plane. For the random energy model, we obtain the phase diagram in the plane and find that there are two types of distributions of zeros: two-dimensional distribution within a phase and one-dimensional one on a phase boundary. Phases with a two-dimensional distribution are characterized by a novel order parameter defined in the present replica analysis. We also discuss possible patterns of distributions by studying several systems.

The added value of the replica simulators in the exploitation of nuclear power plants

International Nuclear Information System (INIS)

Diaz Giron, P. a.; Ortega, F.; Rivero, N.

2011-01-01

Nuclear power plants full scope replica simulators were in the past solely designed following operational personnel training criteria. Nevertheless, these simulators not only feature a high replica control room but also provide an accurate process response. Control room replica simulators are presently based on complex technological platforms permitting highest physical and functional fidelity, allowing to be used as versatile and value added tools in diverse plants operation and maintenance activities. In recent years. Tecnatom has extended the use of such simulators to different engineering applications. this article intends to identify the simulators use in training and other applications beyond training. (Author)

Zeolite-templated carbon replica: a Grand Canonical Monte-Carlo simulation study

International Nuclear Information System (INIS)

Thomas Roussel; Roland J M Pellenq; Christophe Bichara; Roger Gadiou; Antoine Didion; Cathie Vix Guterl; Fabrice Gaslain; Julien Parmentier; Valentin Valtchev; Joel Patarin

2005-01-01

Microporous carbon materials are interesting for several applications such as hydrogen storage, catalysis or electrical double layer capacitors. The development of the negative templating method to obtain carbon replicas from ordered templates, has lead to the synthesis of several new materials which have interesting textural properties, attractive for energy storage. Among the possible templates, zeolites can be used to obtain highly microporous carbon materials. Nevertheless, the phenomena involved in the replica synthesis are not fully understood, and the relationships between the structure of the template, the carbon precursor and the resulting carbon material need to be investigated. Experimental results for carbon zeolite-templated nano-structures can be found in a series of papers; see for instance ref. [1] in which Wang et al describe a route to ultra-small Single Wall Carbon Nano-tubes (SWNTs) using the porosity of zeolite AlPO 4 -5. After matrix removal, the resulting structure is a free-standing bundle of 4 Angstroms large nano-tubes. However, it is highly desirable to obtain an ordered porous carbon structure that forms a real 3D network to be used for instance in gas storage applications. Carbon replica of faujasite and EMT zeolites can have these properties since these zeolites have a 3D porous network made of 10 Angstroms cages connected to each other through 7 Angstroms large windows. The first step of this study was to generate a theoretical carbon replica structure of various zeolites (faujasite, EMT, AlPO 4 -5, silicalite). For this purpose, we used the Grand Canonical Monte-Carlo (GCMC) technique in which the carbon-carbon interactions were described within the frame of a newly developed Tight Binding approach and the carbon-zeolite interactions assumed to be characteristic of physi-sorption. The intrinsic stability of the subsequent carbon nano-structures was then investigated after mimicking the removal of the inorganic phase by switching

Utility of replica techniques for x-ray microanalysis of second phase particles

International Nuclear Information System (INIS)

Bentley, J.

1984-01-01

X-ray microanalysis of second phase particles in ion-milled or electropolished thin foils is often complicated by the presence of the matrix nearby. Extraction replica techniques provide a means to avoid many of the complications of thin-foil analyses. In this paper, three examples of the analysis of second phase particles are described and illustrate the improvement obtained by the use of extraction replicas for qualitative analysis, quantitative analysis, and analysis of radioactive specimens

The Efficacy of Epidemic Algorithms on Detecting Node Replicas in Wireless Sensor Networks

Directory of Open Access Journals (Sweden)

Narasimha Shashidhar

2015-12-01

Full Text Available A node replication attack against a wireless sensor network involves surreptitious efforts by an adversary to insert duplicate sensor nodes into the network while avoiding detection. Due to the lack of tamper-resistant hardware and the low cost of sensor nodes, launching replication attacks takes little effort to carry out. Naturally, detecting these replica nodes is a very important task and has been studied extensively. In this paper, we propose a novel distributed, randomized sensor duplicate detection algorithm called Discard to detect node replicas in group-deployed wireless sensor networks. Our protocol is an epidemic, self-organizing duplicate detection scheme, which exhibits emergent properties. Epidemic schemes have found diverse applications in distributed computing: load balancing, topology management, audio and video streaming, computing aggregate functions, failure detection, network and resource monitoring, to name a few. To the best of our knowledge, our algorithm is the first attempt at exploring the potential of this paradigm to detect replicas in a wireless sensor network. Through analysis and simulation, we show that our scheme achieves robust replica detection with substantially lower communication, computational and storage requirements than prior schemes in the literature.

Acceleration of Lateral Equilibration in Mixed Lipid Bilayers Using Replica Exchange with Solute Tempering.

Science.gov (United States)

Huang, Kun; García, Angel E

2014-10-14

The lateral heterogeneity of cellular membranes plays an important role in many biological functions such as signaling and regulating membrane proteins. This heterogeneity can result from preferential interactions between membrane components or interactions with membrane proteins. One major difficulty in molecular dynamics simulations aimed at studying the membrane heterogeneity is that lipids diffuse slowly and collectively in bilayers, and therefore, it is difficult to reach equilibrium in lateral organization in bilayer mixtures. Here, we propose the use of the replica exchange with solute tempering (REST) approach to accelerate lateral relaxation in heterogeneous bilayers. REST is based on the replica exchange method but tempers only the solute, leaving the temperature of the solvent fixed. Since the number of replicas in REST scales approximately only with the degrees of freedom in the solute, REST enables us to enhance the configuration sampling of lipid bilayers with fewer replicas, in comparison with the temperature replica exchange molecular dynamics simulation (T-REMD) where the number of replicas scales with the degrees of freedom of the entire system. We apply the REST method to a cholesterol and 1,2-dipalmitoyl- sn -glycero-3-phosphocholine (DPPC) bilayer mixture and find that the lateral distribution functions of all molecular pair types converge much faster than in the standard MD simulation. The relative diffusion rate between molecules in REST is, on average, an order of magnitude faster than in the standard MD simulation. Although REST was initially proposed to study protein folding and its efficiency in protein folding is still under debate, we find a unique application of REST to accelerate lateral equilibration in mixed lipid membranes and suggest a promising way to probe membrane lateral heterogeneity through molecular dynamics simulation.

Surgery planning and navigation by laser lithography plastic replica. Features, clinical applications, and advantages

International Nuclear Information System (INIS)

Kihara, Tomohiko; Tanaka, Yuuko; Furuhata, Kentaro

1995-01-01

The use of three-dimensional replicas created using laserlithography has recently become popular for surgical planning and intraoperative navigation in plastic surgery and oral maxillofacial surgery. In this study, we investigated many clinical applications that we have been involved in regarding the production of three-dimensional replicas. We have also analyzed the features, application classes, and advantages of this method. As a result, clinical applications are categorized into three classes, which are 'three-dimensional shape recognition', 'simulated surgery', and 'template'. The distinct features of three-dimensional replicas are 'direct recognition', 'fast manipulation', and 'free availability'. Meeting the requirements of surgical planning and intraoperative navigation, they have produced satisfactory results in clinical applications. (author)

Synthesis and properties of ZnFe{sub 2}O{sub 4} replica with biological hierarchical structure

Energy Technology Data Exchange (ETDEWEB)

Liu, Hongyan; Guo, Yiping, E-mail: ypguo@sjtu.edu.cn; Zhang, Yangyang; Wu, Fen; Liu, Yun; Zhang, Di, E-mail: zhangdi@sjtu.edu.cn

2013-09-20

Highlights: • ZFO replica with hierarchical structure was synthesized from butterfly wings. • Biotemplate has a significant impact on the properties of ZFO material. • Our method opens up new avenues for the synthesis of spinel ferrites. -- Abstract: ZnFe{sub 2}O{sub 4} replica with biological hierarchical structure was synthesized from Papilio paris by a sol–gel method followed by calcination. The crystallographic structure and morphology of the obtained samples were characterized by X-ray diffraction, field-emission scanning electron microscope, and transmittance electron microscope. The results showed that the hierarchical structures were retained in the ZFO replica of spinel structure. The magnetic behavior of such novel products was measured by a vibrating sample magnetometer. A superparamagnetism-like behavior was observed due to nanostructuration size effects. In addition, the ZFO replica with “quasi-honeycomb-like structure” showed a much higher specific capacitance of 279.4 F g{sup −1} at 10 mV s{sup −1} in comparison with ZFO powder of 137.3 F g{sup −1}, attributing to the significantly increased surface area. These results demonstrated that ZFO replica is a promising candidate for novel magnetic devices and supercapacitors.

Replica treatment of the Calogero-Sutherland model

International Nuclear Information System (INIS)

Gangardt, Dimitry M.; Kamenev, Alex

2001-01-01

Employing Forrester-Ha method of Jack polynomials, we derive an integral identity connecting certain N-fold coordinate average of the Calogero-Sutherland model with the n-fold replica integral. Subsequent analytical continuation in n leads to asymptotic expressions for the (static and dynamic) density-density correlation function of the model as well as the Green's function for an arbitrary coupling constant λ

Gamma-ray dosimetry measurements of the Little Boy replica

International Nuclear Information System (INIS)

Plassmann, E.A.; Pederson, R.A.

1984-01-01

We present the current status of our gamma-ray dosimetry results for the Little Boy replica. Both Geiger-Mueller and thermoluminescent detectors were used in the measurements. Future work is needed to test assumptions made in data analysis

Evaluation of creep damage development by the replica method; Utvaerdering av krypskadeutveckling med replikmetoden

Energy Technology Data Exchange (ETDEWEB)

Storesund, Jan [Det Norske Veritas AB, Stockholm (Sweden); Roennholm, Markku [Fortum (Sweden)

2002-04-01

Creep damage development in high temperature components can be monitored by the replica method. Damage is classified and an experience based time period for safe operation is recommended where a re-inspection should be conducted. Original recommendations are still commonly used but there are also developed ones are mostly less conservative. A data base of more than 6000 replicas, collected from welded components in Swedish and Finnish power plants, has been evaluated with respect to damage development in the present project. The results are in general in good agreement to the existing developed recommendations for re-inspections. Important factors that should be considered for use of the recommendations are highlighted: Service history, Material, welding and heat treatment, Measure of pressure and temperature, System stresses, Geometrical stress concentrations, stress distributions, Design of components and welds, Creep crack growth, Starts and stops, Extent and performance of the replica method. These factors have been analysed with respect to the evaluated data resulting in comments to the existing recommendations. In addition, recommendations and conditions for a high reliability of the replica method are described. The comments and recommendations can be read in separate sections in the end of the report.

Comparison of pulsed versus continuous oxygen delivery using realistic adult nasal airway replicas

Directory of Open Access Journals (Sweden)

Chen JZ

2017-08-01

Full Text Available John Z Chen,1 Ira M Katz,2 Marine Pichelin,2 Kaixian Zhu,3 Georges Caillibotte,2 Michelle L Noga,4 Warren H Finlay,1 Andrew R Martin1 1Department of Mechanical Engineering, University of Alberta, Edmonton, AB, Canada; 2Medical R&D, Air Liquide Santé International, Centre de Recherche Paris-Saclay, Les Loges-en-Josas, 3Centre Explor!, Air Liquide Healthcare, Gentilly, France; 4Radiology and Diagnostic Imaging, University of Alberta, Edmonton, AB, Canada Background: Portable oxygen concentrators (POCs typically include pulse flow (PF modes to conserve oxygen. The primary aims of this study were to develop a predictive in vitro model for inhaled oxygen delivery using a set of realistic airway replicas, and to compare PF for a commercial POC with steady flow (SF from a compressed oxygen cylinder. Methods: Experiments were carried out using a stationary compressed oxygen cylinder, a POC, and 15 adult nasal airway replicas based on airway geometries derived from medical images. Oxygen delivery via nasal cannula was tested at PF settings of 2.0 and 6.0, and SF rates of 2.0 and 6.0 L/min. A test lung simulated three breathing patterns representative of a chronic obstructive pulmonary disease patient at rest, during exercise, and while asleep. Volume-averaged fraction of inhaled oxygen (FiO2 was calculated by analyzing oxygen concentrations sampled at the exit of each replica and inhalation flow rates over time. POC pulse volumes were also measured using a commercial O2 conserver test system to attempt to predict FiO2 for PF. Results: Relative volume-averaged FiO2 using PF ranged from 68% to 94% of SF values, increasing with breathing frequency and tidal volume. Three of 15 replicas failed to trigger the POC when used with the sleep breathing pattern at the 2.0 setting, and four of 15 replicas failed to trigger at the 6.0 setting. FiO2 values estimated from POC pulse characteristics followed similar trends but were lower than those derived from

Effect of cation nature of zeolite on carbon replicas and their electrochemical capacitance

International Nuclear Information System (INIS)

Zhou, Jin; Li, Wen; Zhang, Zhongshen; Wu, Xiaozhong; Xing, Wei; Zhuo, Shuping

2013-01-01

Graphical abstract: Cation nature of zeolite influences the porosity, surface chemical properties of carbon replicas of zeolite, resulting in different electrochemical capacitance. Highlights: ► The porosity of carbon replica strongly depends on zeolite's effective pore size. ► The surface chemical properties influence by the cation nature of zeolite. ► The N-doping introduces large pseudo-capacitance. ► The HYC800 carbon showed a high capacitance of up to 312 F g −1 in 1 M H 2 SO 4 . ► The prepared carbons show good durability of galvanostatic cycle. -- Abstract: N-doped carbon replicas of zeolite Y are prepared, and the effect of cation nature of zeolite (H + or Na + ) on the carbon replicas is studied. The morphology, structure and surface properties of the carbon materials are investigated by scanning electron microscopy (SEM), transmission electron microscopy (TEM), X-ray diffraction (XRD), N 2 adsorption, X-ray photoelectron spectroscopy (XPS) and Fourier transform infrared spectroscopy (FT-IR). The pore regularity, pore parameter and surface chemical properties of the carbons may strongly depend on the cation nature of the zeolite Y. The carbon replicas of zeolite HY (H-form of zeolite Y) possesses higher pore regularity and much larger surface area than those of zeolite NaY (Na-form of zeolite Y), while the latter carbons seem to possess higher carbonization degrees. Electrochemical measurements show a large faradaic capacitance related to the N- or O-containing groups for the prepared carbons. Owing to the large specific surface area, high pore regularity and heteroatom-doping, the HYC800 sample derived from zeolite HY presents very high gravimetric capacitance, up to 312.4 F g −1 in H 2 SO 4 electrolyte, and this carbon can operate at 1.2 V with good retention ratio in the range of 0.25 to 10 A g −1

Efficient Round-Trip Time Optimization for Replica-Exchange Enveloping Distribution Sampling (RE-EDS).

Science.gov (United States)

Sidler, Dominik; Cristòfol-Clough, Michael; Riniker, Sereina

2017-06-13

Replica-exchange enveloping distribution sampling (RE-EDS) allows the efficient estimation of free-energy differences between multiple end-states from a single molecular dynamics (MD) simulation. In EDS, a reference state is sampled, which can be tuned by two types of parameters, i.e., smoothness parameters(s) and energy offsets, such that all end-states are sufficiently sampled. However, the choice of these parameters is not trivial. Replica exchange (RE) or parallel tempering is a widely applied technique to enhance sampling. By combining EDS with the RE technique, the parameter choice problem could be simplified and the challenge shifted toward an optimal distribution of the replicas in the smoothness-parameter space. The choice of a certain replica distribution can alter the sampling efficiency significantly. In this work, global round-trip time optimization (GRTO) algorithms are tested for the use in RE-EDS simulations. In addition, a local round-trip time optimization (LRTO) algorithm is proposed for systems with slowly adapting environments, where a reliable estimate for the round-trip time is challenging to obtain. The optimization algorithms were applied to RE-EDS simulations of a system of nine small-molecule inhibitors of phenylethanolamine N-methyltransferase (PNMT). The energy offsets were determined using our recently proposed parallel energy-offset (PEOE) estimation scheme. While the multistate GRTO algorithm yielded the best replica distribution for the ligands in water, the multistate LRTO algorithm was found to be the method of choice for the ligands in complex with PNMT. With this, the 36 alchemical free-energy differences between the nine ligands were calculated successfully from a single RE-EDS simulation 10 ns in length. Thus, RE-EDS presents an efficient method for the estimation of relative binding free energies.

File-based replica management

CERN Document Server

Kunszt, Peter Z; Stockinger, Heinz; Stockinger, Kurt

2005-01-01

Data replication is one of the best known strategies to achieve high levels of availability and fault tolerance, as well as minimal access times for large, distributed user communities using a world-wide Data Grid. In certain scientific application domains, the data volume can reach the order of several petabytes; in these domains, data replication and access optimization play an important role in the manageability and usability of the Grid. In this paper, we present the design and implementation of a replica management Grid middleware that was developed within the EDG project left bracket European Data Grid Project (EDG), http://www.eu-egee.org right bracket and is designed to be extensible so that user communities can adjust its detailed behavior according to their QoS requirements.

A Replica Detection Scheme Based on the Deviation in Distance Traveled Sliding Window for Wireless Sensor Networks

Directory of Open Access Journals (Sweden)

Alekha Kumar Mishra

2017-01-01

Full Text Available Node replication attack possesses a high level of threat in wireless sensor networks (WSNs and it is severe when the sensors are mobile. A limited number of replica detection schemes in mobile WSNs (MWSNs have been reported till date, where most of them are centralized in nature. The centralized detection schemes use time-location claims and the base station (BS is solely responsible for detecting replica. Therefore, these schemes are prone to single point of failure. There is also additional communication overhead associated with sending time-location claims to the BS. A distributed detection mechanism is always a preferred solution to the above kind of problems due to significantly lower communication overhead than their counterparts. In this paper, we propose a distributed replica detection scheme for MWSNs. In this scheme, the deviation in the distance traveled by a node and its replica is recorded by the observer nodes. Every node is an observer node for some nodes in the network. Observers are responsible for maintaining a sliding window of recent time-distance broadcast of the nodes. A replica is detected by an observer based on the degree of violation computed from the deviations recorded using the time-distance sliding window. The analysis and simulation results show that the proposed scheme is able to achieve higher detection probability compared to distributed replica detection schemes such as Efficient Distributed Detection (EDD and Multi-Time-Location Storage and Diffusion (MTLSD.

Implementation and performance analysis of the LHCb LFC replica using Oracle streams technology

CERN Document Server

Düllmann, D; Martelli, B; Peco, G; Bonifazzi, F; Da Fonte Perez, E; Baranowski, Z; Vagnoni, V

2007-01-01

The presentation will describe the architecture and the deployment of the LHCb read-only File Catalogue for the LHC Computing Grid (LFC) replica implemented at the Italian INFN National Centre for Telematics and Informatics (CNAF), and evaluate a series of tests on the LFC with replica. The LHCb computing model foresees the replication of the central LFC database in every Tier-1, in order to assure more scalability and fault tolerance to LHCb applications Scientific data intensive applications use a large collection of files for storing data. In particular, as regards the HEP community, data generated by large detectors will be managed and stored using databases. The intensive access to information stored in databases by the Grid computing applications requires a distributed database replication in order to guarantee the scalability and, in case of failure, redundancy. Besides the results of the tests will be an important reference for all the Grid users This talk will describe the replica implementation of L...

Replica Node Detection Using Enhanced Single Hop Detection with Clonal Selection Algorithm in Mobile Wireless Sensor Networks

Directory of Open Access Journals (Sweden)

L. S. Sindhuja

2016-01-01

Full Text Available Security of Mobile Wireless Sensor Networks is a vital challenge as the sensor nodes are deployed in unattended environment and they are prone to various attacks. One among them is the node replication attack. In this, the physically insecure nodes are acquired by the adversary to clone them by having the same identity of the captured node, and the adversary deploys an unpredictable number of replicas throughout the network. Hence replica node detection is an important challenge in Mobile Wireless Sensor Networks. Various replica node detection techniques have been proposed to detect these replica nodes. These methods incur control overheads and the detection accuracy is low when the replica is selected as a witness node. This paper proposes to solve these issues by enhancing the Single Hop Detection (SHD method using the Clonal Selection algorithm to detect the clones by selecting the appropriate witness nodes. The advantages of the proposed method include (i increase in the detection ratio, (ii decrease in the control overhead, and (iii increase in throughput. The performance of the proposed work is measured using detection ratio, false detection ratio, packet delivery ratio, average delay, control overheads, and throughput. The implementation is done using ns-2 to exhibit the actuality of the proposed work.

Zeolite-templated carbon replica: a grand canonical Monte-Carlo simulation study

International Nuclear Information System (INIS)

Roussel, Th.; Pellenq, R.J.M.; Bichara, Ch.; Gadiou, R.; Didion, A.; Vix-Guterl, C.; Gaslain, F.; Parmentier, J.; Valtchev, V.; Patarin, J.

2005-01-01

Microporous carbon materials are interesting for several applications such as hydrogen storage, catalysis or electrical double layer capacitors. The development of the negative templating method to obtain carbon replicas from ordered templates, has lead to the synthesis of several new materials which have interesting textural properties, attractive for energy storage. Among the possible templates, zeolites can be used to obtain highly microporous carbon materials. Nevertheless, the phenomena involved in the replica synthesis are not fully understood, and the relationships between the structure of the template, the carbon precursor and the resulting carbon material need to be investigated. Experimental results for carbon zeolite-templated nano-structures can be found in a series of papers; see for instance ref. [1] in which Wang et al describe a route to ultra-small Single Wall Carbon Nano-tubes (SWNTs) using the porosity of zeolite AlPO 4 -5. After matrix removal, the resulting structure is a free-standing bundle of 4 Angstroms large nano-tubes. However, it is highly desirable to obtain an ordered porous carbon structure that forms a real 3D network to be used for instance in gas storage applications. Carbon replica of faujasite and EMT zeolites can have these properties since these zeolites have a 3D porous network made of 10 Angstroms cages connected to each other through 7 Angstroms large windows. The first step of this study was to generate a theoretical carbon replica structure of various zeolites (faujasite, EMT, AlPO 4 -5, silicalite). For this purpose, we used the Grand Canonical Monte-Carlo (GCMC) technique in which the carbon-carbon interactions were described within the frame of a newly developed Tight Binding approach and the carbon-zeolite interactions assumed to be characteristic of physisorption. The intrinsic stability of the subsequent carbon nano-structures was then investigated after mimicking the removal of the inorganic phase by switching

Broken symmetry in the mean field theory of the ising spin glass: replica way and no replica way

International Nuclear Information System (INIS)

De Dominicis, C.

1983-06-01

We review the type of symmetry breaking involved in the solution discovered by Parisi and in the static derivation of the solution first introduced via dynamics by Sompolinsky. We turn to a formulation of the problem due to Thouless, Anderson and Palmer (TAP) that put a set of equations for the magnetization. A probability law for the magnetization is then built. We consider two cases: (i) a canonical distribution which is shown to give indentical results to the Hamiltonian formulation under a weak and physical assumption and (ii) a white distribution characterized by two matrices and a response. We show what symmetry breaking is necessary to recover Sompolinsky free energy. In section III we supplement replica indices in the Hamiltonian approach by ''time'' indices ans show in particular that the analytic continuation involved in Sompolinsky's equilibrium derivation, is trying to mimick a translational symmetry breaking in ''time'' that incorporates Sompolinsky's ansatz of a long time scale sequence. In section IV we apply the same treatment to the white average approach and show that, replicas can be altogether discorded and replaced by ''time''. Finally, we briefly discuss the attribution of distinct answers for the standard spin glass order parameter depending on the physical situation: equilibrium or non equilibrium associated with canonical or white (non canonical) initial conditions and density matrices

Neutron and gamma-ray dose-rates from the Little Boy replica

International Nuclear Information System (INIS)

Plassmann, E.A.; Pederson, R.A.

1984-01-01

We report dose-rate information obtained at many locations in the near vicinity of, and at distances out to 0.64 km from, the Little Boy replica while it was operated as a critical assembly. The measurements were made with modified conventional dosimetry instruments that used an Anderson-Braun detector for neutrons and a Geiger-Mueller tube for gamma rays with suitable electronic modules to count particle-induced pulses. Thermoluminescent dosimetry methods provide corroborative data. Our analysis gives estimates of both neutron and gamma-ray relaxation lengths in air for comparison with earlier calculations. We also show the neutron-to-gamma-ray dose ratio as a function of distance from the replica. Current experiments and further data analysis will refine these results. 7 references, 8 figures

Systematic expansion in the order parameter for replica theory of the dynamical glass transition.

Science.gov (United States)

Jacquin, Hugo; Zamponi, Francesco

2013-03-28

It has been shown recently that predictions from mode-coupling theory for the glass transition of hard-spheres become increasingly bad when dimensionality increases, whereas replica theory predicts a correct scaling. Nevertheless if one focuses on the regime around the dynamical transition in three dimensions, mode-coupling results are far more convincing than replica theory predictions. It seems thus necessary to reconcile the two theoretic approaches in order to obtain a theory that interpolates between low-dimensional, mode-coupling results, and "mean-field" results from replica theory. Even though quantitative results for the dynamical transition issued from replica theory are not accurate in low dimensions, two different approximation schemes--small cage expansion and replicated hyper-netted-chain (RHNC)--provide the correct qualitative picture for the transition, namely, a discontinuous jump of a static order parameter from zero to a finite value. The purpose of this work is to develop a systematic expansion around the RHNC result in powers of the static order parameter, and to calculate the first correction in this expansion. Interestingly, this correction involves the static three-body correlations of the liquid. More importantly, we separately demonstrate that higher order terms in the expansion are quantitatively relevant at the transition, and that the usual mode-coupling kernel, involving two-body direct correlation functions of the liquid, cannot be recovered from static computations.

Biosynthesis of cathodoluminescent zinc oxide replicas using butterfly (Papilio paris) wing scales as templates

International Nuclear Information System (INIS)

Zhang Wang; Zhang Di; Fan Tongxiang; Ding Jian; Gu Jiajun; Guo Qixin; Ogawa, Hiroshi

2009-01-01

Papilio paris butterflies have an iridescent blue color patch on their hind wings which is visible over a wide viewing angle. Optical and scanning electron microscopy observations of scales from the wings show that the blue color scales have very different microstructure to the matt black ones which also populate the wings. Scanning electron micrographs of the blue scales show that their surfaces comprise a regular two-dimensional array of concavities. By contrast the matt black scales have fine, sponge-like structure, between the ridges and the cross ribs in the scales. Using both types of scale as bio-templates, we obtain zinc oxide (ZnO) replicas of the microstructures of the original scales. Room temperature (T = 300 K) cathodoluminescence spectra of these ZnO replicas have also been studied. Both spectra show a similar sharp near-band-edge emission, but have different green emission, which we associate with the different microstructures of the ZnO replicas

Biosynthesis of cathodoluminescent zinc oxide replicas using butterfly (Papilio paris) wing scales as templates

Energy Technology Data Exchange (ETDEWEB)

Zhang Wang [State Key Lab of Metal Matrix Composites, Shanghai Jiao Tong University, 200240, Shanghai (China); Zhang Di [State Key Lab of Metal Matrix Composites, Shanghai Jiao Tong University, 200240, Shanghai (China)], E-mail: zhangdi@sjtu.edu.cn; Fan Tongxiang; Ding Jian; Gu Jiajun [State Key Lab of Metal Matrix Composites, Shanghai Jiao Tong University, 200240, Shanghai (China); Guo Qixin; Ogawa, Hiroshi [Department of Electrical and Electronic Engineering, Saga University, Saga 840-8502 (Japan)

2009-01-01

Papilio paris butterflies have an iridescent blue color patch on their hind wings which is visible over a wide viewing angle. Optical and scanning electron microscopy observations of scales from the wings show that the blue color scales have very different microstructure to the matt black ones which also populate the wings. Scanning electron micrographs of the blue scales show that their surfaces comprise a regular two-dimensional array of concavities. By contrast the matt black scales have fine, sponge-like structure, between the ridges and the cross ribs in the scales. Using both types of scale as bio-templates, we obtain zinc oxide (ZnO) replicas of the microstructures of the original scales. Room temperature (T = 300 K) cathodoluminescence spectra of these ZnO replicas have also been studied. Both spectra show a similar sharp near-band-edge emission, but have different green emission, which we associate with the different microstructures of the ZnO replicas.

Physical replicas and the Bose glass in cold atomic gases

International Nuclear Information System (INIS)

Morrison, S; Kantian, A; Daley, A J; Zoller, P; Katzgraber, H G; Lewenstein, M; Buechler, H P

2008-01-01

We study cold atomic gases in a disorder potential and analyse the correlations between different systems subjected to the same disorder landscape. Such independent copies with the same disorder landscape are known as replicas. While, in general, these are not accessible experimentally in condensed matter systems, they can be realized using standard tools for controlling cold atomic gases in an optical lattice. Of special interest is the overlap function which represents a natural order parameter for disordered systems and is a correlation function between the atoms of two independent replicas with the same disorder. We demonstrate an efficient measurement scheme for the determination of this disorder-induced correlation function. As an application, we focus on the disordered Bose-Hubbard model and determine the overlap function within the perturbation theory and a numerical analysis. We find that the measurement of the overlap function allows for the identification of the Bose-glass phase in certain parameter regimes

Physical replicas and the Bose glass in cold atomic gases

Energy Technology Data Exchange (ETDEWEB)

Morrison, S; Kantian, A; Daley, A J; Zoller, P [Institute for Theoretical Physics, University of Innsbruck, Technikerstr. 25, A-6020 Innsbruck (Austria); Katzgraber, H G [Theoretische Physik, ETH Zurich, CH-8093 Zuerich (Switzerland); Lewenstein, M [ICAO-Institut de Ciencies Fotoniques, Parc Mediterrani de la Tecnologia, E-08860 Castelldefels, Barcelona (Spain); Buechler, H P [Institute for Theoretical Physics III, University of Stuttgart, Pfaffenwaldring 57, 70550 Stuttgart (Germany)], E-mail: sarah.morrison@uibk.ac.at

2008-07-15

We study cold atomic gases in a disorder potential and analyse the correlations between different systems subjected to the same disorder landscape. Such independent copies with the same disorder landscape are known as replicas. While, in general, these are not accessible experimentally in condensed matter systems, they can be realized using standard tools for controlling cold atomic gases in an optical lattice. Of special interest is the overlap function which represents a natural order parameter for disordered systems and is a correlation function between the atoms of two independent replicas with the same disorder. We demonstrate an efficient measurement scheme for the determination of this disorder-induced correlation function. As an application, we focus on the disordered Bose-Hubbard model and determine the overlap function within the perturbation theory and a numerical analysis. We find that the measurement of the overlap function allows for the identification of the Bose-glass phase in certain parameter regimes.

Platinum replica electron microscopy: Imaging the cytoskeleton globally and locally.

Science.gov (United States)

Svitkina, Tatyana M

2017-05-01

Structural studies reveal how smaller components of a system work together as a whole. However, combining high resolution of details with full coverage of the whole is challenging. In cell biology, light microscopy can image many cells in their entirety, but at a lower resolution, whereas electron microscopy affords very high resolution, but usually at the expense of the sample size and coverage. Structural analyses of the cytoskeleton are especially demanding, because cytoskeletal networks are unresolvable by light microscopy due to their density and intricacy, whereas their proper preservation is a challenge for electron microscopy. Platinum replica electron microscopy can uniquely bridge the gap between the "comfort zones" of light and electron microscopy by allowing high resolution imaging of the cytoskeleton throughout the entire cell and in many cells in the population. This review describes the principles and applications of platinum replica electron microscopy for studies of the cytoskeleton. Copyright © 2017 Elsevier Ltd. All rights reserved.

Replica Exchange Gaussian Accelerated Molecular Dynamics: Improved Enhanced Sampling and Free Energy Calculation.

Science.gov (United States)

Huang, Yu-Ming M; McCammon, J Andrew; Miao, Yinglong

2018-04-10

Through adding a harmonic boost potential to smooth the system potential energy surface, Gaussian accelerated molecular dynamics (GaMD) provides enhanced sampling and free energy calculation of biomolecules without the need of predefined reaction coordinates. This work continues to improve the acceleration power and energy reweighting of the GaMD by combining the GaMD with replica exchange algorithms. Two versions of replica exchange GaMD (rex-GaMD) are presented: force constant rex-GaMD and threshold energy rex-GaMD. During simulations of force constant rex-GaMD, the boost potential can be exchanged between replicas of different harmonic force constants with fixed threshold energy. However, the algorithm of threshold energy rex-GaMD tends to switch the threshold energy between lower and upper bounds for generating different levels of boost potential. Testing simulations on three model systems, including the alanine dipeptide, chignolin, and HIV protease, demonstrate that through continuous exchanges of the boost potential, the rex-GaMD simulations not only enhance the conformational transitions of the systems but also narrow down the distribution width of the applied boost potential for accurate energetic reweighting to recover biomolecular free energy profiles.

Characterization of Nb SRF cavity materials by white light interferometry and replica techniques

Energy Technology Data Exchange (ETDEWEB)

Xu, Chen [Thomas Jefferson National Accelerator Facility, Newport News, VA 23606 (United States); The Applied Science Department, The College of William and Mary, Williamsburg, VA 23185 (United States); Reece, Charles [Thomas Jefferson National Accelerator Facility, Newport News, VA 23606 (United States); Kelley, Michael, E-mail: mkelley@jlab.org [Thomas Jefferson National Accelerator Facility, Newport News, VA 23606 (United States); The Applied Science Department, The College of William and Mary, Williamsburg, VA 23185 (United States)

2013-06-01

Much work has shown that the topography of the interior surface is an important contributor to the performance of Nb superconducting radiofrequency (SRF) accelerator cavities. Micron-scale topography is implicated in non-linear loss mechanisms that limit the useful accelerating gradient range and impact cryogenic cost. Aggressive final chemical treatments in cavity production seek to reliably obtain “smoothest” surfaces with superior performance. Process development suffers because the cavity interior surface cannot be viewed directly without cutting out pieces, rendering the cavities unavailable for further study. Here we explore replica techniques as an alternative, providing imprints of cavity internal surface that can be readily examined. A second matter is the topography measurement technique used. Atomic force microscopy (AFM) has proven successful, but too time intensive for routine use in this application. We therefore introduce white light interferometry (WLI) as an alternative approach. We examined real surfaces and their replicas, using AFM and WLI. We find that the replica/WLI is promising to provide the large majority of the desired information, recognizing that a trade-off is being made between best lateral resolution (AFM) and the opportunity to examine much more surface area (WLI).

Phonon replica dynamics in high quality GaN epilayers and AlGaN/GaN quantum wells

Energy Technology Data Exchange (ETDEWEB)

Alderighi, D.; Vinattieri, A.; Colocci, M. [Ist. Nazionale Fisica della Materia, Firenze (Italy); Dipt. di Fisica and LENS, Firenze (Italy); Bogani, F. [Ist. Nazionale Fisica della Materia, Firenze (Italy); Dipt. di Energetica, Firenze (Italy); Gottardo, S. [Dipt. di Fisica and LENS, Firenze (Italy); Grandjean, N.; Massies, J. [Centre de Recherche sur l' Hetero-Epitaxie et ses Applications, CNRS, Valbonne (France)

2001-01-01

We present an experimental study of the exciton and phonon replica dynamics in high quality GaN epilayers and AlGaN/GaN quantum wells (QW) by means of picosecond time-resolved photoluminescence (PL) measurements. A non-exponential decay is observed both at the zero phonon line (ZPL) and at the n = 1 LO replica. Time-resolved spectra unambiguously assign the replica to the free exciton A recombination. Optical migration effects are detected both in the epilayer and the QWs samples and disappear as the temperature increases up to 60-90 K. Even though the sample quality is comparable to state-of-the-art samples, localization effects dominate the exciton dynamics at low temperature in the studied GaN based structures. (orig.)

Application of carbon extraction replicas in grain-size measurements of high-strength steels using TEM

International Nuclear Information System (INIS)

Poorhaydari, Kioumars; Ivey, Douglas G.

2007-01-01

In this paper, the application of carbon extraction replicas in grain-size measurements is introduced and discussed. Modern high-strength microalloyed steels, used as structural or pipeline materials, have very small grains with substructures. Replicas used in transmission electron microscopes can resolve the grain boundaries and can be used for systematic measurement of grain size in cases where the small size of the grains pushes the resolution of conventional optical microscopes. The grain-size variations obtained from replicas are compared with those obtained from optical and scanning electron microscopy. An emphasis is placed on the importance of using the correct technique for imaging and the optimal magnification. Grain-size measurements are used for estimation of grain-boundary strengthening contribution to yield strength. The variation in grain size is also correlated with hardness in the base metal of several microalloyed steels, as well as the fine-grained heat-affected zone of a weld structure with several heat inputs

Dynamical self-arrest in symmetric and asymmetric diblock copolymer melts using a replica approach within a local theory.

Science.gov (United States)

Wu, Sangwook

2009-03-01

We investigate dynamical self-arrest in a diblock copolymer melt using a replica approach within a self-consistent local method based on dynamical mean-field theory (DMFT). The local replica approach effectively predicts (chiN)_{A} for dynamical self-arrest in a block copolymer melt for symmetric and asymmetric cases. We discuss the competition of the cubic and quartic interactions in the Landau free energy for a block copolymer melt in stabilizing a glassy state depending on the chain length. Our local replica theory provides a universal value for the dynamical self-arrest in block copolymer melts with (chiN)_{A} approximately 10.5+64N;{-3/10} for the symmetric case.

Replica scaling studies of hard missile impacts on reinforced concrete

International Nuclear Information System (INIS)

Barr, P.; Carter, P.G.; Howe, W.D.; Neilson, A.J.

1982-01-01

Missile and target combinations at three different liners scales have been used in an experimental assessment of the applicability of replica scaling to the dynamic behaviour of reinforced concrete structures impacted by rigid missiles. Experimental results are presented for models with relative linear scales of 1, 0.37 and 0.12. (orig.) [de

Effect of roughness and material strength on the mechanical properties of fracture replicas

International Nuclear Information System (INIS)

Wibowo, J.; Amadei, B.; Sture, S.

1995-08-01

This report presents the results of 11 rotary shear tests conducted on replicas of three hollow cylinders of natural fractures with JRC values of 7.7, 9.4 and 12.0. The JRC values were determined from the results of laser profilometer measurements. The replicas were created from gypsum cement. By varying the water-to-gypsum cement ratio from 30 to 45%, fracture replicas with different values of compressive strength (JCS) were created. The rotary shear experiments were performed under constant normal (nominal) stresses ranging between 0.2 and 1.6 MPa. In this report, the shear test results are compared with predictions using Barton's empirical peak shear strength equation. observations during the experiments indicate that only certain parts of the fracture profiles influence fracture shear strength and dilatancy. Under relatively low applied normal stresses, the JCS does not seem to have a significant effect on shear behavior. As an alternative, a new procedure for predicting the shear behavior of fractures was developed. The approach is based on basic fracture properties such as fracture surface profile data and the compressive strength, modulus of elasticity, and Poisson's ratio of the fracture walls. Comparison between predictions and actual shear test results shows that the alternative procedure is a reliable method

Replica field theory for a polymer in random media

International Nuclear Information System (INIS)

Goldschmidt, Yadin Y.

2000-01-01

In this paper we revisit the problem of a (non-self-avoiding) polymer chain in a random medium which was previously investigated by Edwards and Muthukumar (EM) [J. Chem. Phys. 89, 2435 (1988)]. As noticed by Cates and Ball (CB) [J. Phys. (France) 49, 2009 (1988)] there is a discrepancy between the predictions of the replica calculation of EM and the expectation that in an infinite medium the quenched and annealed results should coincide (for a chain that is free to move) and a long polymer should always collapse. CB argued that only in a finite volume one might see a ''localization transition'' (or crossover) from a stretched to a collapsed chain in three spatial dimensions. Here we carry out the replica calculation in the presence of an additional confining harmonic potential that mimics the effect of a finite volume. Using a variational scheme with five variational parameters we derive analytically for d -1/(4-d) ∼(g ln V) -1/(4-d) , where R is the radius of gyration, g is the strength of the disorder, μ is the spring constant associated with the confining potential, and V is the associated effective volume of the system. Thus the EM result is recovered with their constant replaced by ln V as argued by CB. We see that in the strict infinite volume limit the polymer always collapses, but for finite volume a transition from a stretched to a collapsed form might be observed as a function of the strength of the disorder. For d V ' ∼exp(g 2/(2-d) L (4-d)/(2-d) ) the annealed results are recovered and R∼(Lg) 1/(d-2) , where L is the length of the polymer. Hence the polymer also collapses in the large L limit. The one-step replica symmetry breaking solution is crucial for obtaining the above results. (c) 2000 The American Physical Society

Stability and replica symmetry in the ising spin glass: a toy model

International Nuclear Information System (INIS)

De Dominicis, C.; Mottishaw, P.

1986-01-01

Searching for possible replica symmetric solutions in an Ising spin glass (in the tree approximation) we investigate a toy model whose bond distribution has two non vanishing cumulants (instead of one only as in a gaussian distribution)

Tunable hydrodynamic characteristics in microchannels with biomimetic superhydrophobic (lotus leaf replica) walls.

Science.gov (United States)

Dey, Ranabir; Raj M, Kiran; Bhandaru, Nandini; Mukherjee, Rabibrata; Chakraborty, Suman

2014-05-21

The present work comprehensively addresses the hydrodynamic characteristics through microchannels with lotus leaf replica (exhibiting low adhesion and superhydrophobic properties) walls. The lotus leaf replica is fabricated following an efficient, two-step, soft-molding process and is then integrated with rectangular microchannels. The inherent biomimetic, superhydrophobic surface-liquid interfacial hydrodynamics, and the consequential bulk flow characteristics, are critically analyzed by the micro-particle image velocimetry technique. It is observed that the lotus leaf replica mediated microscale hydrodynamics comprise of two distinct flow regimes even within the low Reynolds number paradigm, unlike the commonly perceived solely apparent slip-stick dominated flows over superhydrophobic surfaces. While the first flow regime is characterized by an apparent slip-stick flow culminating in an enhanced bulk throughput rate, the second flow regime exhibits a complete breakdown of the aforementioned laminar and uni-axial flow model, leading to a predominantly no-slip flow. Interestingly, the critical flow condition dictating the transition between the two hydrodynamic regimes is intrinsically dependent on the micro-confinement effect. In this regard, an energetically consistent theoretical model is also proposed to predict the alterations in the critical flow condition with varying microchannel configurations, by addressing the underlying biomimetic surface-liquid interfacial conditions. Hence, the present research endeavour provides a new design-guiding paradigm for developing multi-functional microfluidic devices involving biomimetic, superhydrophobic surfaces, by judicious exploitation of the tunable hydrodynamic characteristics in the two regimes.

Localization-Free Detection of Replica Node Attacks in Wireless Sensor Networks Using Similarity Estimation with Group Deployment Knowledge

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Chao Ding

2017-01-01

Full Text Available Due to the unattended nature and poor security guarantee of the wireless sensor networks (WSNs, adversaries can easily make replicas of compromised nodes, and place them throughout the network to launch various types of attacks. Such an attack is dangerous because it enables the adversaries to control large numbers of nodes and extend the damage of attacks to most of the network with quite limited cost. To stop the node replica attack, we propose a location similarity-based detection scheme using deployment knowledge. Compared with prior solutions, our scheme provides extra functionalities that prevent replicas from generating false location claims without deploying resource-consuming localization techniques on the resource-constraint sensor nodes. We evaluate the security performance of our proposal under different attack strategies through heuristic analysis, and show that our scheme achieves secure and robust replica detection by increasing the cost of node replication. Additionally, we evaluate the impact of network environment on the proposed scheme through theoretic analysis and simulation experiments, and indicate that our scheme achieves effectiveness and efficiency with substantially lower communication, computational, and storage overhead than prior works under different situations and attack strategies.

Evaluation of generalized degrees of freedom for sparse estimation by replica method

Science.gov (United States)

Sakata, A.

2016-12-01

We develop a method to evaluate the generalized degrees of freedom (GDF) for linear regression with sparse regularization. The GDF is a key factor in model selection, and thus its evaluation is useful in many modelling applications. An analytical expression for the GDF is derived using the replica method in the large-system-size limit with random Gaussian predictors. The resulting formula has a universal form that is independent of the type of regularization, providing us with a simple interpretation. Within the framework of replica symmetric (RS) analysis, GDF has a physical meaning as the effective fraction of non-zero components. The validity of our method in the RS phase is supported by the consistency of our results with previous mathematical results. The analytical results in the RS phase are calculated numerically using the belief propagation algorithm.

Mimicking the action of folding chaperones by Hamiltonian replica-exchange molecular dynamics simulations : Application in the refinement of de novo models

NARCIS (Netherlands)

Fan, Hao; Periole, Xavier; Mark, Alan E.

The efficiency of using a variant of Hamiltonian replica-exchange molecular dynamics (Chaperone H-replica-exchange molecular dynamics [CH-REMD]) for the refinement of protein structural models generated de novo is investigated. In CH-REMD, the interaction between the protein and its environment,

Neutron and gamma dose and spectra measurements on the Little Boy replica

International Nuclear Information System (INIS)

Hoots, S.; Wadsworth, D.

1984-01-01

The radiation-measurement team of the Weapons Engineering Division at Lawrence Livermore National Laboratory (LLNL) measured neutron and gamma dose and spectra on the Little Boy replica at Los Alamos National Laboratory (LANL) in April 1983. This assembly is a replica of the gun-type atomic bomb exploded over Hiroshima in 1945. These measurements support the National Academy of Sciences Program to reassess the radiation doses due to atomic bomb explosions in Japan. Specifically, the following types of information were important: neutron spectra as a function of geometry, gamma to neutron dose ratios out to 1.5 km, and neutron attenuation in the atmosphere. We measured neutron and gamma dose/fission from close-in to a kilometer out, and neutron and gamma spectra at 90 and 30 0 close-in. This paper describes these measurements and the results. 12 references, 13 figures, 5 tables

Número de replicações de inquéritos dietéticos para estimativa da ingestão de nutrientes em gestantes brasileiras

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Daniela Saes Sartorelli

2014-12-01

Full Text Available Objetivos: determinar o número de replicações de inquéritos dietéticos necessários para estimar a ingestão usual de nutrientes e em categorias de consumo de gestantes no Brasil. Métodos: estudo prospectivo conduzido entre 82 gestantes, no qual as informações sobre energia e 18 nutrientes foram obtidas em três inquéritos recordatórios de 24 horas, sendo um em cada trimestre gestacional. Empregaram-se diferentes fórmulas para o cálculo do número de replicações do método necessárias para classificar as gestantes em categorias de ingestão, que considera a razão das variâncias intrapessoal/interpessoal, e para a estimativa da ingestão usual, baseado na variância intrapessoal. Resultados: para classificar as gestantes em categorias são necessárias entre 11 e 51 replicações do método, considerando-se coeficiente de correlação de 0,9. Admitindo coeficiente de correlação de 0,7, o número de replicações do método variou entre quatro e 19. Para a estimativa da ingestão usual são necessárias entre duas e 33 replicações, admitindo-se um erro de 10%. Considerando-se um erro de 20%, são necessárias entre uma e sete replicações de inquéritos dietéticos. Conclusões: é necessário um elevado número de replicações de inquéritos dietéticos na estimativa da ingestão de nutrientes na gestação e o emprego de um número reduzido de replicações poderá atenuar as associações entre a dieta e desfechos de saúde maternos e fetais.

Proactive replica checking to assure reliability of data in cloud storage with minimum replication

Science.gov (United States)

Murarka, Damini; Maheswari, G. Uma

2017-11-01

The two major issues for cloud storage systems are data reliability and storage costs. For data reliability protection, multi-replica replication strategy which is used mostly in current clouds acquires huge storage consumption, leading to a large storage cost for applications within the loud specifically. This paper presents a cost-efficient data reliability mechanism named PRCR to cut back the cloud storage consumption. PRCR ensures data reliability of large cloud information with the replication that might conjointly function as a price effective benchmark for replication. The duplication shows that when resembled to the standard three-replica approach, PRCR will scale back to consume only a simple fraction of the cloud storage from one-third of the storage, thence considerably minimizing the cloud storage price.

An implementation of the maximum-caliber principle by replica-averaged time-resolved restrained simulations.

Science.gov (United States)

Capelli, Riccardo; Tiana, Guido; Camilloni, Carlo

2018-05-14

Inferential methods can be used to integrate experimental informations and molecular simulations. The maximum entropy principle provides a framework for using equilibrium experimental data, and it has been shown that replica-averaged simulations, restrained using a static potential, are a practical and powerful implementation of such a principle. Here we show that replica-averaged simulations restrained using a time-dependent potential are equivalent to the principle of maximum caliber, the dynamic version of the principle of maximum entropy, and thus may allow us to integrate time-resolved data in molecular dynamics simulations. We provide an analytical proof of the equivalence as well as a computational validation making use of simple models and synthetic data. Some limitations and possible solutions are also discussed.

Replica Approach for Minimal Investment Risk with Cost

Science.gov (United States)

Shinzato, Takashi

2018-06-01

In the present work, the optimal portfolio minimizing the investment risk with cost is discussed analytically, where an objective function is constructed in terms of two negative aspects of investment, the risk and cost. We note the mathematical similarity between the Hamiltonian in the mean-variance model and the Hamiltonians in the Hopfield model and the Sherrington-Kirkpatrick model, show that we can analyze this portfolio optimization problem by using replica analysis, and derive the minimal investment risk with cost and the investment concentration of the optimal portfolio. Furthermore, we validate our proposed method through numerical simulations.

Nuclear research emulsion neutron spectrometry at the Little-Boy replica

International Nuclear Information System (INIS)

Gold, R.; Roberts, J.H.; Preston, C.C.

1985-10-01

Nuclear research emulsions (NRE) have been used to characterize the neutron spectrum emitted by the Little-Boy replica. NRE were irradiated at the Little-Boy surface as well as approximately 2 m from the center of the Little-Boy replica using polar angles of 0 0 , 30 0 , 60 0 and 90 0 . For the NRE exposed at 2 m, neutron background was determined using shadow shields of borated polyethylene. Emulsion scanning to date has concentrated exclusively on the 2-m, 0 0 and 2-m, 90 0 locations. Approximately 5000 proton-recoil tracks have been measured in NRE irradiated at each of these locations. Neutron spectra obtained from these NRE proton-recoil spectra are compared with both liquid scintillator neutron spectrometry and Monte Carlo calculations. NRE and liquid scintillator neutron spectra generally agree within experimental uncertainties at the 2-m, 90 0 location. However, at the 2-m, 0 0 location, the neutron spectra derived from these two independent experimental methods differ significantly. NRE spectra and Monte Carlo calculations exhibit general agreement with regard to both intensity as well as energy dependence. Better agreement is attained between theory and experiment at the 2-m, 90 0 location, where the neutron intensity is considerably higher. 14 refs., 18 figs., 11 tabs

Fabrication of micropillar substrates using replicas of alpha-particle irradiated and chemically etched PADC films

International Nuclear Information System (INIS)

Ng, C.K.M.; Chong, E.Y.W.; Roy, V.A.L.; Cheung, K.M.C.; Yeung, K.W.K.; Yu, K.N.

2012-01-01

We proposed a simple method to fabricate micropillar substrates. Polyallyldiglycol carbonate (PADC) films were irradiated by alpha particles and then chemically etched to form a cast with micron-scale spherical pores. A polydimethylsiloxane (PDMS) replica of this PADC film gave a micropillar substrate with micron-scale spherical pillars. HeLa cells cultured on such a micropillar substrate had significantly larger percentage of cells entering S-phase, attached cell numbers and cell spreading areas. - Highlights: ► We proposed a simple method to fabricate micropillar substrates. ► Polyallyldiglycol carbonate films were irradiated and etched to form casts. ► Polydimethylsiloxane replica then formed the micropillar substrates. ► Attachment and proliferation of HeLa cells were enhanced on these substrates.

Axial displacement of abutments into implants and implant replicas, with the tapered cone-screw internal connection, as a function of tightening torque.

Science.gov (United States)

Dailey, Bruno; Jordan, Laurence; Blind, Olivier; Tavernier, Bruno

2009-01-01

The passive fit of a superstructure on implant abutments is essential to success. One source of error when using a tapered cone-screw internal connection may be the difference between the tightening torque level applied to the abutments by the laboratory technician compared to that applied by the treating clinician. The purpose of this study was to measure the axial displacement of tapered cone-screw abutments into implants and their replicas as a function of the tightening torque level. Twenty tapered cone-screw abutments were selected. Two groups were created: 10 abutments were secured into 10 implants, and 10 abutments were secured into 10 corresponding implant replicas. Each abutment was tightened in increasing increments of 5 Ncm, from 0 Ncm to 45 Ncm, with a torque controller. The length of each sample was measured repeatedly with an Electronic Digital Micrometer. The mean axial displacement for the implant group and the replica group was calculated. The data were analyzed by the Mann-Whitney and Spearman tests. For both groups, there was always an axial displacement of the abutment upon each incremental application of torque. The mean axial displacement values varied between 7 and 12 microm for the implant group and between 6 and 21 microm for the replica group at each 5-Ncm increment. From 0 to 45 Ncm, the total mean axial displacement values were 89 microm for the implant group and 122 microm for the replica group. There was a continuous axial displacement of the abutments into implants and implant replicas when the applied torque was raised from 0 to 45 Ncm. Torque applied above the level recommended by the manufacturer increased the difference in displacement between the two groups.

Difficult Sudoku Puzzles Created by Replica Exchange Monte Carlo Method

OpenAIRE

Watanabe, Hiroshi

2013-01-01

An algorithm to create difficult Sudoku puzzles is proposed. An Ising spin-glass like Hamiltonian describing difficulty of puzzles is defined, and difficult puzzles are created by minimizing the energy of the Hamiltonian. We adopt the replica exchange Monte Carlo method with simultaneous temperature adjustments to search lower energy states efficiently, and we succeed in creating a puzzle which is the world hardest ever created in our definition, to our best knowledge. (Added on Mar. 11, the ...

How could the replica method improve accuracy of performance assessment of channel coding?

Energy Technology Data Exchange (ETDEWEB)

Kabashima, Yoshiyuki [Department of Computational Intelligence and Systems Science, Tokyo Institute of technology, Yokohama 226-8502 (Japan)], E-mail: kaba@dis.titech.ac.jp

2009-12-01

We explore the relation between the techniques of statistical mechanics and information theory for assessing the performance of channel coding. We base our study on a framework developed by Gallager in IEEE Trans. Inform. Theory IT-11, 3 (1965), where the minimum decoding error probability is upper-bounded by an average of a generalized Chernoff's bound over a code ensemble. We show that the resulting bound in the framework can be directly assessed by the replica method, which has been developed in statistical mechanics of disordered systems, whereas in Gallager's original methodology further replacement by another bound utilizing Jensen's inequality is necessary. Our approach associates a seemingly ad hoc restriction with respect to an adjustable parameter for optimizing the bound with a phase transition between two replica symmetric solutions, and can improve the accuracy of performance assessments of general code ensembles including low density parity check codes, although its mathematical justification is still open.

Replica sizing strategy for aortic valve replacement improves haemodynamic outcome of the epic supra valve.

Science.gov (United States)

Gonzalez-Lopez, David; Faerber, Gloria; Diab, Mahmoud; Amorim, Paulo; Zeynalov, Natig; Doenst, Torsten

2017-10-01

Current sizing strategies suggest valve selection based on annulus diameter despite supra-annular placement of biological prostheses potentially allowing placement of a larger size. We assessed the frequency of selecting a larger prosthesis if prosthesis size was selected using a replica (upsizing) and evaluated its impact on haemodynamics. We analysed all discharge echocardiograms between June 2012 and June 2014, where a replica sizer was used for isolated aortic valve replacement (Epic Supra: 266 patients, Trifecta: 49 patients). Upsizing was possible in 71% of the Epic Supra valves (by 1 size: 168, by 2 sizes: 20) and in 59% of the Trifectas (by 1 size: 26, by 2 sizes: 3). Patients for whom upsizing was possible had the lowest pressure gradients within their annulus size groups. The difference was significant in annulus diameters of 21-22 or 25-26 mm (Epic Supra) and 23-24 mm (Trifecta). Trifecta gradients were the lowest. However, the ability to upsize the Epic Supra by 2 sizes eliminated the differences between Epic Supra and Trifecta. Upsizing did not cause intraoperative complications. Using replica sizers for aortic prosthesis size selection allows the implantation of bigger prostheses than recommended in most cases and reduces postoperative gradients, specifically for Epic Supra. © The Author 2017. Published by Oxford University Press on behalf of the European Association for Cardio-Thoracic Surgery. All rights reserved.

Inferring predator behavior from attack rates on prey-replicas that differ in conspicuousness.

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Yoel E Stuart

Full Text Available Behavioral ecologists and evolutionary biologists have long studied how predators respond to prey items novel in color and pattern. Because a predatory response is influenced by both the predator's ability to detect the prey and a post-detection behavioral response, variation among prey types in conspicuousness may confound inference about post-prey-detection predator behavior. That is, a relatively high attack rate on a given prey type may result primarily from enhanced conspicuousness and not predators' direct preference for that prey. Few studies, however, account for such variation in conspicuousness. In a field experiment, we measured predation rates on clay replicas of two aposematic forms of the poison dart frog Dendrobates pumilio, one novel and one familiar, and two cryptic controls. To ask whether predators prefer or avoid a novel aposematic prey form independently of conspicuousness differences among replicas, we first modeled the visual system of a typical avian predator. Then, we used this model to estimate replica contrast against a leaf litter background to test whether variation in contrast alone could explain variation in predator attack rate. We found that absolute predation rates did not differ among color forms. Predation rates relative to conspicuousness did, however, deviate significantly from expectation, suggesting that predators do make post-detection decisions to avoid or attack a given prey type. The direction of this deviation from expectation, though, depended on assumptions we made about how avian predators discriminate objects from the visual background. Our results show that it is important to account for prey conspicuousness when investigating predator behavior and also that existing models of predator visual systems need to be refined.

Fabrication of micropillar substrates using replicas of alpha-particle irradiated and chemically etched PADC films

Energy Technology Data Exchange (ETDEWEB)

Ng, C.K.M. [Department of Physics and Materials Science, City University of Hong Kong, Tat Chee Avenue, Kowloon Tong (Hong Kong); Chong, E.Y.W. [Department of Orthopaedics and Traumatology, University of Hong Kong (Hong Kong); Roy, V.A.L. [Department of Physics and Materials Science, City University of Hong Kong, Tat Chee Avenue, Kowloon Tong (Hong Kong); Cheung, K.M.C.; Yeung, K.W.K. [Department of Orthopaedics and Traumatology, University of Hong Kong (Hong Kong); Yu, K.N., E-mail: appetery@cityu.edu.hk [Department of Physics and Materials Science, City University of Hong Kong, Tat Chee Avenue, Kowloon Tong (Hong Kong)

2012-07-15

We proposed a simple method to fabricate micropillar substrates. Polyallyldiglycol carbonate (PADC) films were irradiated by alpha particles and then chemically etched to form a cast with micron-scale spherical pores. A polydimethylsiloxane (PDMS) replica of this PADC film gave a micropillar substrate with micron-scale spherical pillars. HeLa cells cultured on such a micropillar substrate had significantly larger percentage of cells entering S-phase, attached cell numbers and cell spreading areas. - Highlights: Black-Right-Pointing-Pointer We proposed a simple method to fabricate micropillar substrates. Black-Right-Pointing-Pointer Polyallyldiglycol carbonate films were irradiated and etched to form casts. Black-Right-Pointing-Pointer Polydimethylsiloxane replica then formed the micropillar substrates. Black-Right-Pointing-Pointer Attachment and proliferation of HeLa cells were enhanced on these substrates.

Replica Analysis for Portfolio Optimization with Single-Factor Model

Science.gov (United States)

Shinzato, Takashi

2017-06-01

In this paper, we use replica analysis to investigate the influence of correlation among the return rates of assets on the solution of the portfolio optimization problem. We consider the behavior of an optimal solution for the case where the return rate is described with a single-factor model and compare the findings obtained from our proposed methods with correlated return rates with those obtained with independent return rates. We then analytically assess the increase in the investment risk when correlation is included. Furthermore, we also compare our approach with analytical procedures for minimizing the investment risk from operations research.

Efficacy of independence sampling in replica exchange simulations of ordered and disordered proteins.

Science.gov (United States)

Lee, Kuo Hao; Chen, Jianhan

2017-11-15

Recasting temperature replica exchange (T-RE) as a special case of Gibbs sampling has led to a simple and efficient scheme for enhanced mixing (Chodera and Shirts, J. Chem. Phys., 2011, 135, 194110). To critically examine if T-RE with independence sampling (T-REis) improves conformational sampling, we performed T-RE and T-REis simulations of ordered and disordered proteins using coarse-grained and atomistic models. The results demonstrate that T-REis effectively increase the replica mobility in temperatures space with minimal computational overhead, especially for folded proteins. However, enhanced mixing does not translate well into improved conformational sampling. The convergences of thermodynamic properties interested are similar, with slight improvements for T-REis of ordered systems. The study re-affirms the efficiency of T-RE does not appear to be limited by temperature diffusion, but by the inherent rates of spontaneous large-scale conformational re-arrangements. Due to its simplicity and efficacy of enhanced mixing, T-REis is expected to be more effective when incorporated with various Hamiltonian-RE protocols. © 2017 Wiley Periodicals, Inc. © 2017 Wiley Periodicals, Inc.

Order parameter free enhanced sampling of the vapor-liquid transition using the generalized replica exchange method.

Science.gov (United States)

Lu, Qing; Kim, Jaegil; Straub, John E

2013-03-14

The generalized Replica Exchange Method (gREM) is extended into the isobaric-isothermal ensemble, and applied to simulate a vapor-liquid phase transition in Lennard-Jones fluids. Merging an optimally designed generalized ensemble sampling with replica exchange, gREM is particularly well suited for the effective simulation of first-order phase transitions characterized by "backbending" in the statistical temperature. While the metastable and unstable states in the vicinity of the first-order phase transition are masked by the enthalpy gap in temperature replica exchange method simulations, they are transformed into stable states through the parameterized effective sampling weights in gREM simulations, and join vapor and liquid phases with a succession of unimodal enthalpy distributions. The enhanced sampling across metastable and unstable states is achieved without the need to identify a "good" order parameter for biased sampling. We performed gREM simulations at various pressures below and near the critical pressure to examine the change in behavior of the vapor-liquid phase transition at different pressures. We observed a crossover from the first-order phase transition at low pressure, characterized by the backbending in the statistical temperature and the "kink" in the Gibbs free energy, to a continuous second-order phase transition near the critical pressure. The controlling mechanisms of nucleation and continuous phase transition are evident and the coexistence properties and phase diagram are found in agreement with literature results.

Impact of Channel Estimation Errors on Multiuser Detection via the Replica Method

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Li Husheng

2005-01-01

Full Text Available For practical wireless DS-CDMA systems, channel estimation is imperfect due to noise and interference. In this paper, the impact of channel estimation errors on multiuser detection (MUD is analyzed under the framework of the replica method. System performance is obtained in the large system limit for optimal MUD, linear MUD, and turbo MUD, and is validated by numerical results for finite systems.

Using the multi-objective optimization replica exchange Monte Carlo enhanced sampling method for protein-small molecule docking.

Science.gov (United States)

Wang, Hongrui; Liu, Hongwei; Cai, Leixin; Wang, Caixia; Lv, Qiang

2017-07-10

In this study, we extended the replica exchange Monte Carlo (REMC) sampling method to protein-small molecule docking conformational prediction using RosettaLigand. In contrast to the traditional Monte Carlo (MC) and REMC sampling methods, these methods use multi-objective optimization Pareto front information to facilitate the selection of replicas for exchange. The Pareto front information generated to select lower energy conformations as representative conformation structure replicas can facilitate the convergence of the available conformational space, including available near-native structures. Furthermore, our approach directly provides min-min scenario Pareto optimal solutions, as well as a hybrid of the min-min and max-min scenario Pareto optimal solutions with lower energy conformations for use as structure templates in the REMC sampling method. These methods were validated based on a thorough analysis of a benchmark data set containing 16 benchmark test cases. An in-depth comparison between MC, REMC, multi-objective optimization-REMC (MO-REMC), and hybrid MO-REMC (HMO-REMC) sampling methods was performed to illustrate the differences between the four conformational search strategies. Our findings demonstrate that the MO-REMC and HMO-REMC conformational sampling methods are powerful approaches for obtaining protein-small molecule docking conformational predictions based on the binding energy of complexes in RosettaLigand.

Three-Dimensional Interpretation of Sculptural Heritage with Digital and Tangible 3D Printed Replicas

Science.gov (United States)

Saorin, José Luis; Carbonell-Carrera, Carlos; Cantero, Jorge de la Torre; Meier, Cecile; Aleman, Drago Diaz

2017-01-01

Spatial interpretation features as a skill to acquire in the educational curricula. The visualization and interpretation of three-dimensional objects in tactile devices and the possibility of digital manufacturing with 3D printers, offers an opportunity to include replicas of sculptures in teaching and, thus, facilitate the 3D interpretation of…

PHYSICAL DISABILITY, STIGMA, AND PHYSICAL ACTIVITY IN CHILDREN: A REPLICA STUDY

Directory of Open Access Journals (Sweden)

Markus GEBHARDT

2016-04-01

Full Text Available Introduction: Stereotypes can be reduced through positive descriptions. A stigma that able-bodied adults have towards children with physical disability can be reduced when the child is portrayed as being active. The study found out that a sporty active child, who uses a wheelchair, is perceived as more competent than the sporty active able-bodied child. Objective: This study is a replica study to support the hypotheses and to examine the stereotypes of able-bodied adults towards children with and without (physical disabilities. Methods: This study presents two experimental replica studies using a 2 (physical activity x 2 (sporty activities. The dependent variables were the perception of competencies and warmth according to Stereotype Content Model (SCM. Study 1 is an online experiment with 355 students of the Open University of Hagen. Study 2 surveys 1176 participants (from Munich and Graz with a paper-pencil-questionnaire. Results: The significant interaction effect was not supported by our studies. The sporty able-bodied child was rated higher in competences than the sporty child, who use a wheelchair. Sporting activity only reduces the stigma towards children with a physical disability slightly. Conclusion: The stigma towards children with physical disability can be reduced when the child is portrayed as being active, but the effect was not strong enough to chance the original classification by the SCM.

Long-time atomistic simulations with the Parallel Replica Dynamics method

Science.gov (United States)

Perez, Danny

Molecular Dynamics (MD) -- the numerical integration of atomistic equations of motion -- is a workhorse of computational materials science. Indeed, MD can in principle be used to obtain any thermodynamic or kinetic quantity, without introducing any approximation or assumptions beyond the adequacy of the interaction potential. It is therefore an extremely powerful and flexible tool to study materials with atomistic spatio-temporal resolution. These enviable qualities however come at a steep computational price, hence limiting the system sizes and simulation times that can be achieved in practice. While the size limitation can be efficiently addressed with massively parallel implementations of MD based on spatial decomposition strategies, allowing for the simulation of trillions of atoms, the same approach usually cannot extend the timescales much beyond microseconds. In this article, we discuss an alternative parallel-in-time approach, the Parallel Replica Dynamics (ParRep) method, that aims at addressing the timescale limitation of MD for systems that evolve through rare state-to-state transitions. We review the formal underpinnings of the method and demonstrate that it can provide arbitrarily accurate results for any definition of the states. When an adequate definition of the states is available, ParRep can simulate trajectories with a parallel speedup approaching the number of replicas used. We demonstrate the usefulness of ParRep by presenting different examples of materials simulations where access to long timescales was essential to access the physical regime of interest and discuss practical considerations that must be addressed to carry out these simulations. Work supported by the United States Department of Energy (U.S. DOE), Office of Science, Office of Basic Energy Sciences, Materials Sciences and Engineering Division.

Gamma-ray spectra and doses from the Little Boy replica

International Nuclear Information System (INIS)

Moss, C.E.; Lucas, M.C.; Tisinger, E.W.; Hamm, M.E.

1984-01-01

Most radiation safety guidelines in the nuclear industry are based on the data concerning the survivors of the nuclear explosions at Hiroshima and Nagasaki. Crucial to determining these guidelines is the radiation from the explosions. We have measured gamma-ray pulse-height distributions from an accurate replica of the Little Boy device used at Hiroshima, operated at low power levels near critical. The device was placed outdoors on a stand 4 m from the ground to minimize environmental effects. The power levels were based on a monitor detector calibrated very carefully in independent experiments. High-resolution pulse-height distributions were acquired with a germanium detector to identify the lines and to obtain line intensities. The 7631 to 7645 keV doublet from neutron capture in the heavy steel case was dominant. Low-resolution pulse-height distributions were acquired with bismuth-germanate detectors. We calculated flux spectra from these distributions using accurately measured detector response functions and efficiency curves. We then calculated dose-rate spectra from the flux spectra using a flux-to-dose-rate conversion procedure. The integral of each dose-rate spectrum gave an integral dose rate. The integral doses at 2 m ranged from 0.46 to 1.03 mrem per 10 13 fissions. The output of the Little Boy replica can be calculated with Monte Carlo codes. Comparison of our experimental spectra, line intensities, and integral doses can be used to verify these calculations at low power levels and give increased confidence to the calculated values from the explosion at Hiroshima. These calculations then can be used to establish better radiation safety guidelines. 7 references, 7 figures, 2 tables

A procedure to analyze surface profiles of the protein molecules visualized by quick-freeze deep-etch replica electron microscopy

Energy Technology Data Exchange (ETDEWEB)

Kimori, Yoshitaka [Division of Biomolecular Imaging, Institute of Medical Science, The University of Tokyo, Minato-ku, Tokyo 108-8639 (Japan); Department of Bioscience and Bioinformatics, Kyushu Institute of Technology, Iizuka, Fukuoka 820-8502 (Japan); Oguchi, Yosuke [Department of Electric Engineering, Kogakuin University, Hachioji, Tokyo 192-0015 (Japan); Ichise, Norihiko [Department of Visual Communication, Komazawa Women' s University, Inagi, Tokyo 206-8511 (Japan); Baba, Norio [Department of Electric Engineering, Kogakuin University, Hachioji, Tokyo 192-0015 (Japan); Katayama, Eisaku [Division of Biomolecular Imaging, Institute of Medical Science, The University of Tokyo, Minato-ku, Tokyo 108-8639 (Japan)]. E-mail: ekatayam@ims.u-tokyo.ac.jp

2007-01-15

Quick-freeze deep-etch replica electron microscopy gives high contrast snapshots of individual protein molecules under physiological conditions in vitro or in situ. The images show delicate internal pattern, possibly reflecting the rotary-shadowed surface profile of the molecule. As a step to build the new system for the 'Structural analysis of single molecules', we propose a procedure to quantitatively characterize the structural property of individual molecules; e.g. conformational type and precise view-angle of the molecules, if the crystallographic structure of the target molecule is available. This paper presents a framework to determine the observed face of the protein molecule by analyzing the surface profile of individual molecules visualized in freeze-replica specimens. A comprehensive set of rotary-shadowed views of the protein molecule was artificially generated from the available atomic coordinates using light-rendering software. Exploiting new mathematical morphology-based image filter, characteristic features were extracted from each image and stored as template. Similar features were extracted from the true replica image and the most likely projection angle and the conformation of the observed particle were determined by quantitative comparison with a set of archived images. The performance and the robustness of the procedure were examined with myosin head structure in defined configuration for actual application.

A procedure to analyze surface profiles of the protein molecules visualized by quick-freeze deep-etch replica electron microscopy

International Nuclear Information System (INIS)

Kimori, Yoshitaka; Oguchi, Yosuke; Ichise, Norihiko; Baba, Norio; Katayama, Eisaku

2007-01-01

Quick-freeze deep-etch replica electron microscopy gives high contrast snapshots of individual protein molecules under physiological conditions in vitro or in situ. The images show delicate internal pattern, possibly reflecting the rotary-shadowed surface profile of the molecule. As a step to build the new system for the 'Structural analysis of single molecules', we propose a procedure to quantitatively characterize the structural property of individual molecules; e.g. conformational type and precise view-angle of the molecules, if the crystallographic structure of the target molecule is available. This paper presents a framework to determine the observed face of the protein molecule by analyzing the surface profile of individual molecules visualized in freeze-replica specimens. A comprehensive set of rotary-shadowed views of the protein molecule was artificially generated from the available atomic coordinates using light-rendering software. Exploiting new mathematical morphology-based image filter, characteristic features were extracted from each image and stored as template. Similar features were extracted from the true replica image and the most likely projection angle and the conformation of the observed particle were determined by quantitative comparison with a set of archived images. The performance and the robustness of the procedure were examined with myosin head structure in defined configuration for actual application

Development of isothermal-isobaric replica-permutation method for molecular dynamics and Monte Carlo simulations and its application to reveal temperature and pressure dependence of folded, misfolded, and unfolded states of chignolin

Science.gov (United States)

Yamauchi, Masataka; Okumura, Hisashi

2017-11-01

We developed a two-dimensional replica-permutation molecular dynamics method in the isothermal-isobaric ensemble. The replica-permutation method is a better alternative to the replica-exchange method. It was originally developed in the canonical ensemble. This method employs the Suwa-Todo algorithm, instead of the Metropolis algorithm, to perform permutations of temperatures and pressures among more than two replicas so that the rejection ratio can be minimized. We showed that the isothermal-isobaric replica-permutation method performs better sampling efficiency than the isothermal-isobaric replica-exchange method and infinite swapping method. We applied this method to a β-hairpin mini protein, chignolin. In this simulation, we observed not only the folded state but also the misfolded state. We calculated the temperature and pressure dependence of the fractions on the folded, misfolded, and unfolded states. Differences in partial molar enthalpy, internal energy, entropy, partial molar volume, and heat capacity were also determined and agreed well with experimental data. We observed a new phenomenon that misfolded chignolin becomes more stable under high-pressure conditions. We also revealed this mechanism of the stability as follows: TYR2 and TRP9 side chains cover the hydrogen bonds that form a β-hairpin structure. The hydrogen bonds are protected from the water molecules that approach the protein as the pressure increases.

On the Application of Replica Molding Technology for the Indirect Measurement of Surface and Geometry of Micromilled Components

DEFF Research Database (Denmark)

Baruffi, Federico; Parenti, Paolo; Cacciatore, Francesco

2017-01-01

the replica molding technology. The method consists of obtaining a replica of the feature that is inaccessible for standard measurement devices and performing its indirect measurement. This paper examines the performance of a commercial replication media applied to the indirect measurement of micromilled...... components. Two specifically designed micromilled benchmark samples were used to assess the accuracy in replicating both surface texture and geometry. A 3D confocal microscope and a focus variation instrument were employed and the associated uncertainties were evaluated. The replication method proved...... to be suitable for characterizing micromilled surface texture even though an average overestimation in the nano-metric level of the Sa parameter was observed. On the other hand, the replicated geometry generally underestimated that of the master, often leading to a different measurement output considering...

A new creep-strain-replica method for evaluating the remaining life time of components

International Nuclear Information System (INIS)

Joas, H.D.

2001-01-01

To realise a safe and economic operation of older power- or chemical plants a strategy for maintenance is necessary, which makes it possible to operate a component or the plant longer than 300,000 operating hours, this also for the situation that the mode of operation has changed meanwhile. In Germany a realistic evaluation of the remaining life-time is done by comparing the actual calculated test data of a component with the code TRD 301 and TRD 508 and additional non-destructive tests or other codes like ASME, Sec. II, BS 5500, AFCEN (1985). According to many boundary conditions, the calculated data are inaccurate and the measuring of creep-strain at temperatures of about 600 o C with capacitive strain-gauges very expensive. Description of the approach of the problems: spotwelding of two gauges to the surface of a component (in a defined distance), forming a gap, producing of replica of the gap after certain operating hours at shut-down conditions by trained personal, evaluation of the replica to gain the amount of creep-strain using a scanning electron microscope, assessment of the creep-strain data. (Author)

One step replica symmetry breaking and extreme order statistics of logarithmic REMs

Directory of Open Access Journals (Sweden)

Xiangyu Cao, Yan V. Fyodorov, Pierre Le Doussal

2016-12-01

Full Text Available Building upon the one-step replica symmetry breaking formalism, duly understood and ramified, we show that the sequence of ordered extreme values of a general class of Euclidean-space logarithmically correlated random energy models (logREMs behave in the thermodynamic limit as a randomly shifted decorated exponential Poisson point process. The distribution of the random shift is determined solely by the large-distance ("infra-red", IR limit of the model, and is equal to the free energy distribution at the critical temperature up to a translation. the decoration process is determined solely by the small-distance ("ultraviolet", UV limit, in terms of the biased minimal process. Our approach provides connections of the replica framework to results in the probability literature and sheds further light on the freezing/duality conjecture which was the source of many previous results for log-REMs. In this way we derive the general and explicit formulae for the joint probability density of depths of the first and second minima (as well its higher-order generalizations in terms of model-specific contributions from UV as well as IR limits. In particular, we show that the second min statistics is largely independent of details of UV data, whose influence is seen only through the mean value of the gap. For a given log-correlated field this parameter can be evaluated numerically, and we provide several numerical tests of our theory using the circular model of $1/f$-noise.

Enhanced Sampling in Molecular Dynamics Using Metadynamics, Replica-Exchange, and Temperature-Acceleration

Directory of Open Access Journals (Sweden)

Cameron Abrams

2013-12-01

Full Text Available We review a selection of methods for performing enhanced sampling in molecular dynamics simulations. We consider methods based on collective variable biasing and on tempering, and offer both historical and contemporary perspectives. In collective-variable biasing, we first discuss methods stemming from thermodynamic integration that use mean force biasing, including the adaptive biasing force algorithm and temperature acceleration. We then turn to methods that use bias potentials, including umbrella sampling and metadynamics. We next consider parallel tempering and replica-exchange methods. We conclude with a brief presentation of some combination methods.

Laboratory studies of groundwater degassing in replicas of natural fractured rock for linear flow geometry

International Nuclear Information System (INIS)

Geller, J.T.

1998-02-01

Laboratory experiments to simulate two-phase (gas and water) flow in fractured rock evolving from groundwater degassing were conducted in transparent replicas of natural rock fractures. These experiments extend the work by Geller et al. (1995) and Jarsjo and Geller (1996) that tests the hypothesis that groundwater degassing caused observed flow reductions in the Stripa Simulated Drift Experiment (SDE). Understanding degassing effects over a range of gas contents is needed due to the uncertainty in the gas contents of the water at the SDE. The main objectives of this study were to: (1) measure the effect of groundwater degassing on liquid flow rates for lower gas contents than the values used in Geller for linear flow geometry in the same fracture replicas of Geller; (2) provide a data set to develop a predictive model of two-phase flow in fractures for conditions of groundwater degassing; and (3) improve the certainty of experimental gas contents (this effort included modifications to the experimental system used by Geller et al. and separate gas-water equilibration tests). The Stripa site is being considered for a high-level radioactive waste repository

A sequence of Clifford algebras and three replicas of Dirac particle

International Nuclear Information System (INIS)

Krolikowski, W.; Warsaw Univ.

1990-01-01

The embedding of Dirac algebra into a sequence N=1, 2, 3,... of Clifford algebras is discussed, leading to Dirac equations with N=1 additional, electromagnetically ''hidden'' spins 1/2. It is shown that there are three and only three replicas N=1, 3, 5 of Dirac particle if the theory of relativity together with the probability interpretation of wave function is applied both to the ''visible'' spin and ''hidden'' spins, and a new ''hidden exclusion principle''is imposed on the wave function (then ''hidden'' spins add up to zero). It is appealing to explore this idea in order to explain the puzzle of three generations of lepton and quarks. (author)

Time-reversal focusing of an expanding soliton gas in disordered replicas

KAUST Repository

Fratalocchi, Andrea; Armaroli, A.; Trillo, S.

2011-01-01

We investigate the properties of time reversibility of a soliton gas, originating from a dispersive regularization of a shock wave, as it propagates in a strongly disordered environment. An original approach combining information measures and spin glass theory shows that time-reversal focusing occurs for different replicas of the disorder in forward and backward propagation, provided the disorder varies on a length scale much shorter than the width of the soliton constituents. The analysis is performed by starting from a new class of reflectionless potentials, which describe the most general form of an expanding soliton gas of the defocusing nonlinear Schrödinger equation.

Time-reversal focusing of an expanding soliton gas in disordered replicas

KAUST Repository

Fratalocchi, Andrea

2011-05-31

We investigate the properties of time reversibility of a soliton gas, originating from a dispersive regularization of a shock wave, as it propagates in a strongly disordered environment. An original approach combining information measures and spin glass theory shows that time-reversal focusing occurs for different replicas of the disorder in forward and backward propagation, provided the disorder varies on a length scale much shorter than the width of the soliton constituents. The analysis is performed by starting from a new class of reflectionless potentials, which describe the most general form of an expanding soliton gas of the defocusing nonlinear Schrödinger equation.

Measurements of the absolute neutron fluence spectrum emitted at 00 and 900 from the Little-Boy replica

International Nuclear Information System (INIS)

Roberts, J.H.; Gold, R.; Preston, C.C.

1986-01-01

Nuclear research emulsions (NRE) have been used to characterize the neutron spectrum emitted by the Little-Boy replica. NRE were irradiated at the Little-Boy surface, as well as approximately 2 m from the center of the Little-Boy replica, using polar angles of 0 0 , 30 0 , 60 0 , and 90 0 . For the NRE exposed at 2 m, neutron background was determined using shadow shields of borated polyethylene. Emulsion scanning to date has concentrated exclusively on the 2-m, 0 0 and 2-m, 90 0 locations. Approximately 5000 proton-recoil tracks have been measured in NRE irradiated at each of these locations. At the 2-m, 90 0 location, the NRE neutron spectrum extends from 0.37 MeV up to 8.2 MeV; whereas the NRE neutron spectrum at the 2-m, 0 0 location is much softer and extends only up to 2.7 MeV. NRE neutron spectrometry results at these two locations are compared with both liquid scintillator neutron spectrometry and Monte Carlo calculations. (author)

Parylene C coating for high-performance replica molding.

Science.gov (United States)

Heyries, Kevin A; Hansen, Carl L

2011-12-07

This paper presents an improvement to the soft lithography fabrication process that uses chemical vapor deposition of poly(chloro-p-xylylene) (parylene C) to protect microfabricated masters and to improve the release of polymer devices following replica molding. Chemical vapor deposition creates nanometre thick conformal coatings of parylene C on silicon wafers having arrays of 30 μm high SU8 pillars with densities ranging from 278 to 10,040 features per mm(2) and aspect ratios (height : width) from 1 : 1 to 6 : 1. A single coating of parylene C was sufficient to permanently promote poly(dimethyl)siloxane (PDMS) mold release and to protect masters for an indefinite number of molding cycles. We also show that the improved release properties of parylene treated masters allow for fabrication with hard polymers, such as poly(urethane), that would otherwise not be compatible with SU8 on silicon masters. Parylene C provides a robust and high performance mold release coating for soft lithography microfabrication that extends the life of microfabricated masters and improves the achievable density and aspect ratio of replicated features.

Non-invasive Florentine Renaissance Panel Painting Replica Structures Investigation by Using Terahertz Time-Domain Imaging (THz-TDI) Technique

DEFF Research Database (Denmark)

Dandolo, Corinna Ludovica Koch; Picollo, Marcello; Cucci, Costanza

2016-01-01

The potentials of the Terahertz Time-Domain Imaging (THz-TDI) technique for a non-invasive inspection of panel paintings have been considered in detail. The THz-TD data acquired on a replica of a panel painting made in imitation of Italian Renaissance panel paintings were processed in order to pr...

Effect of boundary conditions on the strength and deformability of replicas of natural fractures in welded tuff: Comparison between predicted and observed shear behavior using a graphical method

International Nuclear Information System (INIS)

Wibowo, J.; Amadei, B.; Sture, S.; Robertson, A.B.

1993-09-01

Four series of cyclic direct-shear experiments were conducted on several replicas of three natural fractures and a laboratory-developed tensile fracture of welded tuff from Yucca Mountain to test the graphical load-displacement analysis method proposed by Saeb (1989) and Amadei and Saeb (1990). Based on the results of shear tests conducted on several joint replicas under different levels of constant normal load ranging between 0.6 and 25.6 kips (2.7 and 113.9 kN), the shear behavior of joint replicas under constant normal stiffness ranging between 14.8 and 187.5 kips/in. (25.9 and 328.1 kN/cm) was predicted by using the graphical method. The predictions were compared to the results of actual shear tests conducted for the same range of constant normal stiffness. In general, a good agreement was found between the predicted and the observed shear behavior

Autotransplantation of Premolars With a 3-Dimensional Printed Titanium Replica of the Donor Tooth Functioning as a Surgical Guide: Proof of Concept.

Science.gov (United States)

Verweij, Jop P; Moin, David Anssari; Mensink, Gertjan; Nijkamp, Peter; Wismeijer, Daniel; van Merkesteyn, J P Richard

2016-06-01

Autotransplantation of premolars is a good treatment option for young patients who have missing teeth. This study evaluated the use of a preoperatively 3-dimensional (3D)-printed replica of the donor tooth that functions as a surgical guide during autotransplantation. Five consecutive procedures were prospectively observed. Transplantations of maxillary premolars with optimal root development were included in this study. A 3D-printed replica of the donor tooth was used to prepare a precisely fitting new alveolus at the recipient site before extracting the donor tooth. Procedure time, extra-alveolar time, and number of attempts needed to achieve a good fit of the donor tooth in the new alveolus were recorded. For each transplantation procedure, the surgical time was shorter than 30 minutes. An immediate good fit of the donor tooth in the new alveolus was achieved with an extra-alveolar time shorter than 1 minute for all transplantations. These results show that the extra-alveolar time is very short when the surgical guide is used; therefore, the chance of iatrogenic damage to the donor tooth is minimized. The use of a replica of the donor tooth makes the autotransplantation procedure easier for the surgeon and facilitates optimal placement of the transplant. Copyright © 2016 The American Association of Oral and Maxillofacial Surgeons. Published by Elsevier Inc. All rights reserved.

Fabrication of porous TiO{sub 2} films using a spongy replica prepared by layer-by-layer self-assembly method: Application to dye-sensitized solar cells

Energy Technology Data Exchange (ETDEWEB)

Tsuge, Yosuke [Department of Applied Physics and Physico-informatics, Faculty of Science and Technology, Keio University, 3-14-1 Hiyoshi, Kohoku-ku, Yokohama-shi 223-8522 (Japan)]. E-mail: yotsuge@appi.keio.ac.jp; Inokuchi, Kohei [Department of Applied Physics and Physico-informatics, Faculty of Science and Technology, Keio University, 3-14-1 Hiyoshi, Kohoku-ku, Yokohama-shi 223-8522 (Japan); Onozuka, Katsuhiro [Department of Applied Physics and Physico-informatics, Faculty of Science and Technology, Keio University, 3-14-1 Hiyoshi, Kohoku-ku, Yokohama-shi 223-8522 (Japan); Shingo, Ohno [Research and Development Division, Bridgestone Corporation, 3-1-1 Ogawahigashi-cho, Kodaira-shi, Tokyo-to 187-8531 (Japan); Sugi, Shinichiro [Research and Development Division, Bridgestone Corporation, 3-1-1 Ogawahigashi-cho, Kodaira-shi, Tokyo-to 187-8531 (Japan); Yoshikawa, Masato [Research and Development Division, Bridgestone Corporation, 3-1-1 Ogawahigashi-cho, Kodaira-shi, Tokyo-to 187-8531 (Japan); Shiratori, Seimei [Department of Applied Physics and Physico-informatics, Faculty of Science and Technology, Keio University, 3-14-1 Hiyoshi, Kohoku-ku, Yokohama-shi 223-8522 (Japan)]. E-mail: shiratori@appi.keio.ac.jp

2006-03-21

In this study, we report the fabrication of the anatase TiO{sub 2} films with high porosity using a new spongy replica which prepared by layer-by-layer self-assembly technique. The scanning electron microscope photographs revealed that the spongy replica has an extremely porous microstructure and high surface area. Moreover, this porous replica was easily fabricated from a very flat film through the action with silver acetate solution. This method facilitated the porous TiO{sub 2} films with a high surface area. Additionally, by this method, a necking between the TiO{sub 2} films was strong and the amount of loaded dye was increased, so that the increase of forward electron transfer between the TiO{sub 2} films on the surface and the TiO{sub 2} films on the substrate. By using the fabricated porous TiO{sub 2} films as the photoelectrode for dye-sensitized solar cell, the improvement of the photocurrent-voltage characteristic was achieved, resulting in an energy conversion efficiency of Eff = 2.66% with the thickness of approximately 5 {mu}m.

A Probabilistic Framework for Constructing Temporal Relations in Replica Exchange Molecular Trajectories.

Science.gov (United States)

Chattopadhyay, Aditya; Zheng, Min; Waller, Mark Paul; Priyakumar, U Deva

2018-05-23

Knowledge of the structure and dynamics of biomolecules is essential for elucidating the underlying mechanisms of biological processes. Given the stochastic nature of many biological processes, like protein unfolding, it's almost impossible that two independent simulations will generate the exact same sequence of events, which makes direct analysis of simulations difficult. Statistical models like Markov Chains, transition networks etc. help in shedding some light on the mechanistic nature of such processes by predicting long-time dynamics of these systems from short simulations. However, such methods fall short in analyzing trajectories with partial or no temporal information, for example, replica exchange molecular dynamics or Monte Carlo simulations. In this work we propose a probabilistic algorithm, borrowing concepts from graph theory and machine learning, to extract reactive pathways from molecular trajectories in the absence of temporal data. A suitable vector representation was chosen to represent each frame in the macromolecular trajectory (as a series of interaction and conformational energies) and dimensionality reduction was performed using principal component analysis (PCA). The trajectory was then clustered using a density-based clustering algorithm, where each cluster represents a metastable state on the potential energy surface (PES) of the biomolecule under study. A graph was created with these clusters as nodes with the edges learnt using an iterative expectation maximization algorithm. The most reactive path is conceived as the widest path along this graph. We have tested our method on RNA hairpin unfolding trajectory in aqueous urea solution. Our method makes the understanding of the mechanism of unfolding in RNA hairpin molecule more tractable. As this method doesn't rely on temporal data it can be used to analyze trajectories from Monte Carlo sampling techniques and replica exchange molecular dynamics (REMD).

Computer simulation study of in-zeolites templated carbon replicas: structural and adsorption properties for hydrogen storage application

International Nuclear Information System (INIS)

Roussel, T.

2007-05-01

Hydrogen storage is the key issue to envisage this gas for instance as an energy vector in the field of transportation. Porous carbons are materials that are considered as possible candidates. We have studied well-controlled microporous carbon nano-structures, carbonaceous replicas of meso-porous ordered silica materials and zeolites. We realized numerically (using Grand Canonical Monte Carlo Simulations, GCMC) the atomic nano-structures of the carbon replication of four zeolites: AlPO 4 -5, silicalite-1, and Faujasite (FAU and EMT). The faujasite replicas allow nano-casting of a new form of carbon crystalline solid made of tetrahedrally or hexagonally interconnected single wall nano-tubes. The pore size networks are nano-metric giving these materials optimized hydrogen molecular storage capacities (for pure carbon phases). However, we demonstrate that these new carbon forms are not interesting for room temperature efficient storage compared to the void space of a classical gas cylinder. We showed that doping with an alkaline element, such as lithium, one could store the same quantities at 350 bar compared to a classical tank at 700 bar. This result is a possible route to achieve interesting performances for on-board docking systems for instance. (author)

Replica analysis for the duality of the portfolio optimization problem.

Science.gov (United States)

Shinzato, Takashi

2016-11-01

In the present paper, the primal-dual problem consisting of the investment risk minimization problem and the expected return maximization problem in the mean-variance model is discussed using replica analysis. As a natural extension of the investment risk minimization problem under only a budget constraint that we analyzed in a previous study, we herein consider a primal-dual problem in which the investment risk minimization problem with budget and expected return constraints is regarded as the primal problem, and the expected return maximization problem with budget and investment risk constraints is regarded as the dual problem. With respect to these optimal problems, we analyze a quenched disordered system involving both of these optimization problems using the approach developed in statistical mechanical informatics and confirm that both optimal portfolios can possess the primal-dual structure. Finally, the results of numerical simulations are shown to validate the effectiveness of the proposed method.

Replica analysis for the duality of the portfolio optimization problem

Science.gov (United States)

Shinzato, Takashi

2016-11-01

In the present paper, the primal-dual problem consisting of the investment risk minimization problem and the expected return maximization problem in the mean-variance model is discussed using replica analysis. As a natural extension of the investment risk minimization problem under only a budget constraint that we analyzed in a previous study, we herein consider a primal-dual problem in which the investment risk minimization problem with budget and expected return constraints is regarded as the primal problem, and the expected return maximization problem with budget and investment risk constraints is regarded as the dual problem. With respect to these optimal problems, we analyze a quenched disordered system involving both of these optimization problems using the approach developed in statistical mechanical informatics and confirm that both optimal portfolios can possess the primal-dual structure. Finally, the results of numerical simulations are shown to validate the effectiveness of the proposed method.

Beyond Virtual Replicas: 3D Modeling and Maltese Prehistoric Architecture

Directory of Open Access Journals (Sweden)

Filippo Stanco

2013-01-01

Full Text Available In the past decade, computer graphics have become strategic for the development of projects aimed at the interpretation of archaeological evidence and the dissemination of scientific results to the public. Among all the solutions available, the use of 3D models is particularly relevant for the reconstruction of poorly preserved sites and monuments destroyed by natural causes or human actions. These digital replicas are, at the same time, a virtual environment that can be used as a tool for the interpretative hypotheses of archaeologists and as an effective medium for a visual description of the cultural heritage. In this paper, the innovative methodology and aims and outcomes of a virtual reconstruction of the Borg in-Nadur megalithic temple, carried out by Archeomatica Project of the University of Catania, are offered as a case study for a virtual archaeology of prehistoric Malta.

Validation of the BUGJEFF311.BOLIB, BUGENDF70.BOLIB and BUGLE-B7 broad-group libraries on the PCA-Replica (H2O/Fe) neutron shielding benchmark experiment

OpenAIRE

Pescarini Massimo; Orsi Roberto; Frisoni Manuela

2016-01-01

The PCA-Replica 12/13 (H2O/Fe) neutron shielding benchmark experiment was analysed using the TORT-3.2 3D SN code. PCA-Replica reproduces a PWR ex-core radial geometry with alternate layers of water and steel including a pressure vessel simulator. Three broad-group coupled neutron/photon working cross section libraries in FIDO-ANISN format with the same energy group structure (47 n + 20 γ) and based on different nuclear data were alternatively used: the ENEA BUGJEFF311.BOLIB (JEFF-3.1.1) and U...

Flow field analysis in a compliant acinus replica model using particle image velocimetry (PIV).

Science.gov (United States)

Berg, Emily J; Weisman, Jessica L; Oldham, Michael J; Robinson, Risa J

2010-04-19

Inhaled particles reaching the alveolar walls have the potential to cross the blood-gas barrier and enter the blood stream. Experimental evidence of pulmonary dosimetry, however, cannot be explained by current whole lung dosimetry models. Numerical and experimental studies shed some light on the mechanisms of particle transport, but realistic geometries have not been investigated. In this study, a three dimensional expanding model including two generations of respiratory bronchioles and five terminal alveolar sacs was created from a replica human lung cast. Flow visualization techniques were employed to quantify the fluid flow while utilizing streamlines to evaluate recirculation. Pathlines were plotted to track the fluid motion and estimate penetration depth of inhaled air. This study provides evidence that the two generations immediately proximal to the terminal alveolar sacs do not have recirculating eddies, even for intense breathing. Results of Peclet number calculations indicate that substantial convective motion is present in vivo for the case of deep breathing, which significantly increases particle penetration into the alveoli. However, particle diffusion remains the dominant mechanism of particle transport over convection, even for intense breathing because inhaled particles do not reach the alveolar wall in a single breath by convection alone. Examination of the velocity fields revealed significant uneven ventilation of the alveoli during a single breath, likely due to variations in size and location. This flow field data, obtained from replica model geometry with realistic breathing conditions, provides information to better understand fluid and particle behavior in the acinus region of the lung. Copyright 2009 Elsevier Ltd. All rights reserved.

Replica symmetry breaking in short range spin glasses: A review of the theoretical foundations and of the numerical evidence

International Nuclear Information System (INIS)

Marinari, E.; Zuliani, F.; Parisi, G.; Ricci-Tersenghi, F.; Ruiz-Lorenzo, J.J.

2000-04-01

We discuss Replica Symmetry Breaking (RSB) in Spin Glasses. We present an update about the state of the matter, both from the analytical and from the numerical point of view. We put a particular attention in discussing the difficulties stressed by Newman and Stein concerning the problem of constructing pure states in spin glass systems. We mainly discuss about what happens in finite dimensional, realistic spin glasses. Together with a detailed review of some of most important features, facts, data, phenomena, we present some new theoretical ideas and numerical results. We discuss among others the basic idea of the RSB theory, correlation functions, interfaces, overlaps, pure states, random field and the dynamical approach. We present new numerical results for the behavior of coupled replicas and about the numerical verification of sum rules, and we review some of the available numerical results that we consider of larger importance (for example the determination of the phase transition point, the correlation functions, the window overlaps, the dynamical behavior of the system). (author)

Anti-stiction coating of PDMS moulds for rapid microchannel fabrication by double replica moulding

DEFF Research Database (Denmark)

Zhuang, Guisheng; Kutter, Jörg Peter

2011-01-01

), which resulted in an anti-stiction layer for the improved release after PDMS casting. The deposition of FDTS on an O2 plasma-activated surface of PDMS produced a reproducible and well-performing anti-stiction monolayer of fluorocarbon, and we used the FDTS-coated moulds as micro-masters for rapid......In this paper, we report a simple and precise method to rapidly replicate master structures for fast microchannel fabrication by double replica moulding of polydimethylsiloxane (PDMS). A PDMS mould was surface-treated by vapour phase deposition of 1H,1H,2H,2H-perfluorodecyltrichlorosilane (FDTS...

Evaluating the Use of Synthetic Replicas for SEM Identification of Bloodstains (with Emphasis on Archaeological and Ethnographic Artifacts).

Science.gov (United States)

Hortolà, Policarp

2015-12-01

Some archaeological or ethnographic specimens are unavailable for direct examination using a scanning electron microscope (SEM) due to methodological obstacles or legal issues. In order to assess the feasibility of using SEM synthetic replicas for the identification of bloodstains (BSs) via morphology of red blood cells (RBCs), three fragments of different natural raw material (inorganic, stone; plant, wood; animal, shell) were smeared with peripheral human blood. Afterwards, molds and casts of the bloodstained areas were made using vinyl polysiloxane (VPS) silicone impression and polyurethane (PU) resin casting material, respectively. Then, the original samples and the resulting casts were coated with gold and examined in secondary-electron mode using a high-vacuum SEM. Results suggest that PU resin casts obtained from VPS silicone molds can preserve RBC morphology in BSs, and consequently that synthetic replicas are feasible for SEM identification of BSs on cultural heritage specimens made of natural raw materials. Although the focus of this study was on BSs, the method reported in this paper may be applicable to organic residues other than blood, as well as to the surface of other specimens when, for any reason, the original is unavailable for an SEM.

The Membranes of the Basal Labyrinth in Kidney Cells of the Stickleback, Gasterosteus aculeatus, Studied in Ultrathin Sections and Freeze-Etch Replicas

NARCIS (Netherlands)

Wendelaar Bonga, S.E.; Veenhuis, M.

1974-01-01

The structure of the basal labyrinth in kidney cells of freshwater sticklebacks was studied in ultrathin sections (after fixation with permanganate, osmium tetroxide, and combinations of glutaraldehyde with osmium tetroxide) and in freeze-etch replicas (after pretreatment with glutaraldehyde and/or

Autotransplantation of premolars with a 3-dimensional printed titanium replica of the donor tooth functioning as a surgical guide: proof of concept

NARCIS (Netherlands)

Verweij, J.P.; Moin, D.A.; Mensink, G.; Nijkamp, P.; Wismeijer, D.; van Merkesteyn, J.P.R.

2016-01-01

Purpose: Autotransplantation of premolars is a good treatment option for young patients who have missing teeth. This study evaluated the use of a preoperatively 3-dimensional (3D)-printed replica of the donor tooth that functions as a surgical guide during autotransplantation. Materials and Methods:

Enhancing dry adhesives and replica molding with ethyl cyano-acrylate

International Nuclear Information System (INIS)

Bovero, E; Menon, C

2014-01-01

The use of cyano-acrylate to improve the performance of dry adhesives and their method of fabrication is investigated. Specifically, the contributions of this work are: (1) a new adhesion method to adhere to a large variety of surfaces, (2) a strategy to increase the compliance of dry adhesives, and (3) an improved fabrication process for micro-structured dry adhesives based on replica molding. For the first contribution, the adhesion method consists of anchoring a micro-structured dry adhesive to a surface through a layer of hardened ethyl cyano-acrylate (ECA). This method increases the adhesion of the orders of magnitude at the expense of leaving residue after detachment. However, this method preserves reusability. For the second contribution, a double-sided dry adhesive is obtained by introducing a substrate with a millimeter-sized pillar structure, which enabled further increasing adhesion. For the third contribution, an ECA layer is used as a mold for the fabrication of new adhesives. These new types of molds proved able to produce dry adhesives with high reproducibility and low degradation. (paper)

Obtain ceramic porous alumina-zirconia by replica method calcium phosphate coated

International Nuclear Information System (INIS)

Silva, A.D.R.; Rigoli, W.R.; Osiro, Denise; Pallone, E.M.J.A.

2016-01-01

Biomaterials used in bone replacement, including porous bioceramics, are often used as support structure for bone formation and repair. The porous bioceramics are used because present features as biocompatibility, high porosity and pore morphology that confer adequate mechanical strength and induce bone growth. In this work were obtained porous specimens of alumina containing 5% by inclusion of volume of zirconia produced by the replica method. The porous specimens had its surface chemically treated with phosphoric acid and were coated with calcium phosphate. The coating was performed using the biomimetic method during 14 days and an initial pH of 6.1. The porous specimens were characterized using the follow techniques: porosity, axial compression tests, microtomography, scanning electron microscopy (SEM), energy dispersive spectroscopy (EDS), X-ray diffraction (XRD) and pH measurements SBF solution. The results showed specimens with suitable pore morphology for application as biomaterial, and even a reduced time of incubation favored the calcium phosphate phases formation on the material surfaces. (author)

Three-Dimensional (X,Y,Z) Deterministic Analysis of the PCA-Replica Neutron Shielding Benchmark Experiment using the TORT-3.2 Code and Group Cross Section Libraries for LWR Shielding and Pressure Vessel Dosimetry

OpenAIRE

Pescarini Massimo; Orsi Roberto; Frisoni Manuela

2016-01-01

The PCA-Replica 12/13 (H2O/Fe) neutron shielding benchmark experiment was analysed using the ORNL TORT-3.2 3D SN code. PCA-Replica, specifically conceived to test the accuracy of nuclear data and transport codes employed in LWR shielding and radiation damage calculations, reproduces a PWR ex-core radial geometry with alternate layers of water and steel including a PWR pressure vessel simulator. Three broad-group coupled neutron/photon working cross section libraries in FIDO-ANISN format with ...

Obtain ceramic porous alumina-zirconia by replica method calcium phosphate coated; Oobtencao de ceramicas porosas de alumina-zirconia pelo metodo da replica recobertas com fosfato de calcio

Energy Technology Data Exchange (ETDEWEB)

Silva, A.D.R.; Rigoli, W.R.; Osiro, Denise; Pallone, E.M.J.A., E-mail: adinizrs@yahoo.com.br [Universidade de Sao Paulo (FZEA/USP), Pirassununga, SP (Brazil). Faculdade de Zootecnia e Engenharia de Alimentos; Lobo, A.O. [Universidade do Vale do Paraiba (UNIVAP), Sao Jose dos Campos, SP (Brazil)

2016-07-01

Biomaterials used in bone replacement, including porous bioceramics, are often used as support structure for bone formation and repair. The porous bioceramics are used because present features as biocompatibility, high porosity and pore morphology that confer adequate mechanical strength and induce bone growth. In this work were obtained porous specimens of alumina containing 5% by inclusion of volume of zirconia produced by the replica method. The porous specimens had its surface chemically treated with phosphoric acid and were coated with calcium phosphate. The coating was performed using the biomimetic method during 14 days and an initial pH of 6.1. The porous specimens were characterized using the follow techniques: porosity, axial compression tests, microtomography, scanning electron microscopy (SEM), energy dispersive spectroscopy (EDS), X-ray diffraction (XRD) and pH measurements SBF solution. The results showed specimens with suitable pore morphology for application as biomaterial, and even a reduced time of incubation favored the calcium phosphate phases formation on the material surfaces. (author)

Effect of boundary conditions on the strength and deformability of replicas of natural fractures in welded tuff: Data analysis

International Nuclear Information System (INIS)

Wibowo, J.; Amadei, B.; Sture, S.

1994-04-01

Assessing the shear behavior of intact rock ampersand rock fractures is an important issue in the design of a potential nuclear waste repository at Yucca Mountain Nevada. Cyclic direct shear experiments were conducted on replicas of three natural fractures and a laboratory-developed tensile fracture of welded tuff. The tests were carried out under constant normal loads or constant normal stiffnesses with different initial normal load levels. Each test consisted of five cycles of forward and reverse shear motion. Based on the results of the shear tests conducted under constant normal load, the shear behavior of the joint replicas tested under constant normal stiffness was predicted by using the graphical analysis method of Saeb (1989), and Amadei and Saeb (1990). Comparison between the predictions and the actual constant stiffness direct shear experiment results can be found in a report by Wibowo et al. (1993b). Results of the constant normal load shear experiments are analyzed using several constitutive models proposed in the rock mechanics literature for joint shear strength, dilatancy, and joint surface damage. It is shown that some of the existing models have limitations. New constitutive models are proposed and are included in a mathematical analysis tool that can be used to predict joint behavior under various boundary conditions

Pion emission from the T2K replica target: method, results and application

CERN Document Server

Abgrall, N.; Anticic, T.; Antoniou, N.; Argyriades, J.; Baatar, B.; Blondel, A.; Blumer, J.; Bogomilov, M.; Bravar, A.; Brooks, W.; Brzychczyk, J.; Bubak, A.; Bunyatov, S.A.; Busygina, O.; Christakoglou, P.; Chung, P.; Czopowicz, T.; Davis, N.; Debieux, S.; Di Luise, S.; Dominik, W.; Dumarchez, J.; Dynowski, K.; Engel, R.; Ereditato, A.; Esposito, L.S.; Feofilov, G.A.; Fodor, Z.; Ferrero, A.; Fulop, A.; Gazdzicki, M.; Golubeva, M.; Grabez, B.; Grebieszkow, K.; Grzeszczuk, A.; Guber, F.; Haesler, A.; Hakobyan, H.; Hasegawa, T.; Idczak, R.; Igolkin, S.; Ivanov, Y.; Ivashkin, A.; Kadija, K.; Kapoyannis, A.; Katrynska, N.; Kielczewska, D.; Kikola, D.; Kirejczyk, M.; Kisiel, J.; Kiss, T.; Kleinfelder, S.; Kobayashi, T.; Kochebina, O.; Kolesnikov, V.I.; Kolev, D.; Kondratiev, V.P.; Korzenev, A.; Kowalski, S.; Krasnoperov, A.; Kuleshov, S.; Kurepin, A.; Lacey, R.; Larsen, D.; Laszlo, A.; Lyubushkin, V.V.; Mackowiak-Pawlowska, M.; Majka, Z.; Maksiak, B.; Malakhov, A.I.; Maletic, D.; Marchionni, A.; Marcinek, A.; Maris, I.; Marin, V.; Marton, K.; Matulewicz, T.; Matveev, V.; Melkumov, G.L.; Messina, M.; Mrowczynski, St.; Murphy, S.; Nakadaira, T.; Nishikawa, K.; Palczewski, T.; Palla, G.; Panagiotou, A.D.; Paul, T.; Peryt, W.; Petukhov, O.; Planeta, R.; Pluta, J.; Popov, B.A.; Posiadala, M.; Pulawski, S.; Puzovic, J.; Rauch, W.; Ravonel, M.; Renfordt, R.; Robert, A.; Rohrich, D.; Rondio, E.; Rossi, B.; Roth, M.; Rubbia, A.; Rustamov, A.; Rybczynski, M.; Sadovsky, A.; Sakashita, K.; Savic, M.; Sekiguchi, T.; Seyboth, P.; Shibata, M.; Sipos, M.; Skrzypczak, E.; Slodkowski, M.; Staszel, P.; Stefanek, G.; Stepaniak, J.; Strabel, C.; Strobele, H.; Susa, T.; Szuba, M.; Tada, M.; Taranenko, A.; Tereshchenko, V.; Tolyhi, T.; Tsenov, R.; Turko, L.; Ulrich, R.; Unger, M.; Vassiliou, M.; Veberic, D.; Vechernin, V.V.; Vesztergombi, G.; Wilczek, A.; Wlodarczyk, Z.; Wojtaszek-Szwarc, A.; Wyszynski, O.; Zambelli, L.; Zipper, W.; Hartz, M.; Ichikawa, A.K.; Kubo, H.; Marino, A.D.; Matsuoka, K.; Murakami, A.; Nakaya, T.; Suzuki, K.; Yuan, T.; Zimmerman, E.D.

2013-01-01

The T2K long-baseline neutrino oscillation experiment in Japan needs precise predictions of the initial neutrino flux. The highest precision can be reached based on detailed measurements of hadron emission from the same target as used by T2K exposed to a proton beam of the same kinetic energy of 30 GeV. The corresponding data were recorded in 2007-2010 by the NA61/SHINE experiment at the CERN SPS using a replica of the T2K graphite target. In this paper details of the experiment, data taking, data analysis method and results from the 2007 pilot run are presented. Furthermore, the application of the NA61/SHINE measurements to the predictions of the T2K initial neutrino flux is described and discussed.

A Dual-Channel Acquisition Method Based on Extended Replica Folding Algorithm for Long Pseudo-Noise Code in Inter-Satellite Links.

Science.gov (United States)

Zhao, Hongbo; Chen, Yuying; Feng, Wenquan; Zhuang, Chen

2018-05-25

Inter-satellite links are an important component of the new generation of satellite navigation systems, characterized by low signal-to-noise ratio (SNR), complex electromagnetic interference and the short time slot of each satellite, which brings difficulties to the acquisition stage. The inter-satellite link in both Global Positioning System (GPS) and BeiDou Navigation Satellite System (BDS) adopt the long code spread spectrum system. However, long code acquisition is a difficult and time-consuming task due to the long code period. Traditional folding methods such as extended replica folding acquisition search technique (XFAST) and direct average are largely restricted because of code Doppler and additional SNR loss caused by replica folding. The dual folding method (DF-XFAST) and dual-channel method have been proposed to achieve long code acquisition in low SNR and high dynamic situations, respectively, but the former is easily affected by code Doppler and the latter is not fast enough. Considering the environment of inter-satellite links and the problems of existing algorithms, this paper proposes a new long code acquisition algorithm named dual-channel acquisition method based on the extended replica folding algorithm (DC-XFAST). This method employs dual channels for verification. Each channel contains an incoming signal block. Local code samples are folded and zero-padded to the length of the incoming signal block. After a circular FFT operation, the correlation results contain two peaks of the same magnitude and specified relative position. The detection process is eased through finding the two largest values. The verification takes all the full and partial peaks into account. Numerical results reveal that the DC-XFAST method can improve acquisition performance while acquisition speed is guaranteed. The method has a significantly higher acquisition probability than folding methods XFAST and DF-XFAST. Moreover, with the advantage of higher detection

A Dual-Channel Acquisition Method Based on Extended Replica Folding Algorithm for Long Pseudo-Noise Code in Inter-Satellite Links

Directory of Open Access Journals (Sweden)

Hongbo Zhao

2018-05-01

Full Text Available Inter-satellite links are an important component of the new generation of satellite navigation systems, characterized by low signal-to-noise ratio (SNR, complex electromagnetic interference and the short time slot of each satellite, which brings difficulties to the acquisition stage. The inter-satellite link in both Global Positioning System (GPS and BeiDou Navigation Satellite System (BDS adopt the long code spread spectrum system. However, long code acquisition is a difficult and time-consuming task due to the long code period. Traditional folding methods such as extended replica folding acquisition search technique (XFAST and direct average are largely restricted because of code Doppler and additional SNR loss caused by replica folding. The dual folding method (DF-XFAST and dual-channel method have been proposed to achieve long code acquisition in low SNR and high dynamic situations, respectively, but the former is easily affected by code Doppler and the latter is not fast enough. Considering the environment of inter-satellite links and the problems of existing algorithms, this paper proposes a new long code acquisition algorithm named dual-channel acquisition method based on the extended replica folding algorithm (DC-XFAST. This method employs dual channels for verification. Each channel contains an incoming signal block. Local code samples are folded and zero-padded to the length of the incoming signal block. After a circular FFT operation, the correlation results contain two peaks of the same magnitude and specified relative position. The detection process is eased through finding the two largest values. The verification takes all the full and partial peaks into account. Numerical results reveal that the DC-XFAST method can improve acquisition performance while acquisition speed is guaranteed. The method has a significantly higher acquisition probability than folding methods XFAST and DF-XFAST. Moreover, with the advantage of higher

Preserving the Boltzmann ensemble in replica-exchange molecular dynamics.

Science.gov (United States)

Cooke, Ben; Schmidler, Scott C

2008-10-28

We consider the convergence behavior of replica-exchange molecular dynamics (REMD) [Sugita and Okamoto, Chem. Phys. Lett. 314, 141 (1999)] based on properties of the numerical integrators in the underlying isothermal molecular dynamics (MD) simulations. We show that a variety of deterministic algorithms favored by molecular dynamics practitioners for constant-temperature simulation of biomolecules fail either to be measure invariant or irreducible, and are therefore not ergodic. We then show that REMD using these algorithms also fails to be ergodic. As a result, the entire configuration space may not be explored even in an infinitely long simulation, and the simulation may not converge to the desired equilibrium Boltzmann ensemble. Moreover, our analysis shows that for initial configurations with unfavorable energy, it may be impossible for the system to reach a region surrounding the minimum energy configuration. We demonstrate these failures of REMD algorithms for three small systems: a Gaussian distribution (simple harmonic oscillator dynamics), a bimodal mixture of Gaussians distribution, and the alanine dipeptide. Examination of the resulting phase plots and equilibrium configuration densities indicates significant errors in the ensemble generated by REMD simulation. We describe a simple modification to address these failures based on a stochastic hybrid Monte Carlo correction, and prove that this is ergodic.

Replica symmetry breaking solution for two-sublattice fermionic Ising spin glass models in a transverse field

International Nuclear Information System (INIS)

Zimmer, F.M.; Magalhaes, S.G.

2007-01-01

The one-step replica symmetry breaking is used to study the competition between spin glass (SG) and antiferromagnetic order (AF) in two-sublattice fermionic Ising SG models in the presence of a transverse Γ and a parallel H magnetic fields. Inter- and intra-sublattice exchange interactions following Gaussian distributions are considered. The problem is formulated in a Grassmann path integral formalism within the static ansatz. Results show that H favors the non-ergodic mixed phase (AF+SG) and it destroys the AF. The Γ suppresses the magnetic orders, and the intra-sublattice interaction can introduce a discontinuous phase transition

The use of extraction and electronic diffraction replicas for precipitates characterization in welded Cr-Mo Steels

International Nuclear Information System (INIS)

Gutierrez de Saiz-Solabarria, S.; San Juan Nunez, J.M.

1997-01-01

The precipitates and phases found in the structure of welded joints of Heat Interchanges Tubes were studied and identified. The base material satisfied the requirements of ASME Sec II, SA 213 Gr T22 (2 1/4 Cr 1 Mo). Compositions of Filler Metals were: 2 1/4 Cr 1 Mo and 2 1/4 Cr 1 Mo 1/4 Nb. The chemical composition of base and weld materials were analyzed by atomic emission spectroscopy in high vacuum electric discharge and by inductive plasma coupled. For the constituents characterization extraction and diffraction microscopy replicas were used. (Author) 65 refs

Derivation of the probability distribution function for the local density of states of a disordered quantum wire via the replica trick and supersymmetry

International Nuclear Information System (INIS)

Bunder, J.E.J.E.; McKenzie, R.H.Ross H.

2001-01-01

We consider the statistical properties of the local density of states of a one-dimensional Dirac equation in the presence of various types of disorder with Gaussian white-noise distribution. It is shown how either the replica trick or supersymmetry can be used to calculate exactly all the moments of the local density of states. Careful attention is paid to how the results change if the local density of states is averaged over atomic length scales. For both the replica trick and supersymmetry the problem is reduced to finding the ground state of a zero-dimensional Hamiltonian which is written solely in terms of a pair of coupled 'spins' which are elements of u(1,1). This ground state is explicitly found for the particular case of the Dirac equation corresponding to an infinite metallic quantum wire with a single conduction channel. The calculated moments of the local density of states agree with those found previously by Al'tshuler and Prigodin [Sov. Phys. JETP 68 (1989) 198] using a technique based on recursion relations for Feynman diagrams

New force replica exchange method and protein folding pathways probed by force-clamp technique.

Science.gov (United States)

Kouza, Maksim; Hu, Chin-Kun; Li, Mai Suan

2008-01-28

We have developed a new extended replica exchange method to study thermodynamics of a system in the presence of external force. Our idea is based on the exchange between different force replicas to accelerate the equilibrium process. This new approach was applied to obtain the force-temperature phase diagram and other thermodynamical quantities of the three-domain ubiquitin. Using the C(alpha)-Go model and the Langevin dynamics, we have shown that the refolding pathways of single ubiquitin depend on which terminus is fixed. If the N end is fixed then the folding pathways are different compared to the case when both termini are free, but fixing the C terminal does not change them. Surprisingly, we have found that the anchoring terminal does not affect the pathways of individual secondary structures of three-domain ubiquitin, indicating the important role of the multidomain construction. Therefore, force-clamp experiments, in which one end of a protein is kept fixed, can probe the refolding pathways of a single free-end ubiquitin if one uses either the polyubiquitin or a single domain with the C terminus anchored. However, it is shown that anchoring one end does not affect refolding pathways of the titin domain I27, and the force-clamp spectroscopy is always capable to predict folding sequencing of this protein. We have obtained the reasonable estimate for unfolding barrier of ubiquitin, using the microscopic theory for the dependence of unfolding time on the external force. The linkage between residue Lys48 and the C terminal of ubiquitin is found to have the dramatic effect on the location of the transition state along the end-to-end distance reaction coordinate, but the multidomain construction leaves the transition state almost unchanged. We have found that the maximum force in the force-extension profile from constant velocity force pulling simulations depends on temperature nonlinearly. However, for some narrow temperature interval this dependence becomes

Critiques, replicas and proposals for the New Urbanism Vision

Directory of Open Access Journals (Sweden)

Alaide Retana

2014-03-01

Full Text Available The new urbanism (NU is a vision of planning and urban design emerged in 1993, which finds its basis in the design of traditional communities. This trend has had various criticisms and replicas, which were reviewed in relation to urban sprawl, transportation, re-densifying, mix of uses of land, design, gentrification, pedestrianization and safety, which were analyzed in the neighborhood of Santa Barbara in Toluca, Mexico. This area was chosen for being traditional and forming part of the historical center of the city, which even though it was not designed under the guidelines of the NU, it has the quality of traditional, from which the NU would theoretically has taken its essence. The objective of this analysis is to establish whether the NU has the essence of a traditional Mexican neighborhood, as well as to check if the criticisms of the NU are informed when applied to a space belonging to a Mexican historic center that has been abandoned by problems of insecurity and degradation. The general conclusion is that the traditional neighborhoods have provided design elements to the NU, which will refute some of the criticisms, however, proposals for NU in neighborhoods of his-toric centers have to be based on the community, the architecture and existing urbanism, since these elements are those that give the identity.

Geometry anisotropy and mechanical property isotropy in titanium foam fabricated by replica impregnation method

International Nuclear Information System (INIS)

Manonukul, Anchalee; Srikudvien, Pathompoom; Tange, Makiko; Puncreobutr, Chedtha

2016-01-01

Polyurethane (PU) foams have both geometry and mechanical property anisotropy. Metal foams, which are manufacturing by investment casting or melt deposition method and using PU foam as a template, also have mechanical property anisotropy. This work studied the mechanical properties in two directions of titanium foam with four different cell sizes fabricated using the replica impregnation method. The two directions are (1) the loading direction parallel to the foaming direction where the cells are elongated (EL direction) and (2) the loading direction perpendicular to the foaming direction where the cell are equiaxed (EQ direction). The results show that the compression responses for both EL and EQ directions are isotropy. Micrographs and X-ray micro-computed tomography show that the degree of geometry anisotropy is not strong enough to results in mechanical property anisotropy.

Geometry anisotropy and mechanical property isotropy in titanium foam fabricated by replica impregnation method

Energy Technology Data Exchange (ETDEWEB)

Manonukul, Anchalee, E-mail: anchalm@mtec.or.th [National Metal and Materials Technology Center (MTEC), National Science and Technology Development Agency (NSTDA), 114 Thailand Science Park, Paholyothin Rd., Klong 1, Klong Luang, Pathumthani 12120 (Thailand); Srikudvien, Pathompoom [National Metal and Materials Technology Center (MTEC), National Science and Technology Development Agency (NSTDA), 114 Thailand Science Park, Paholyothin Rd., Klong 1, Klong Luang, Pathumthani 12120 (Thailand); Tange, Makiko [Taisei Kogyo Thailand Co., Ltd., Room INC2d-409, Innovation Cluster 2 Building, Tower D, 141 Thailand Science Park, Paholyothin Rd., Klong 1, Klong Luang, Pathumthani 12120 (Thailand); Puncreobutr, Chedtha [Department of Metallurgical Engineering, Faculty of Engineering, Chulalongkorn University, Pathumwan, Bangkok 10330 (Thailand)

2016-02-08

Polyurethane (PU) foams have both geometry and mechanical property anisotropy. Metal foams, which are manufacturing by investment casting or melt deposition method and using PU foam as a template, also have mechanical property anisotropy. This work studied the mechanical properties in two directions of titanium foam with four different cell sizes fabricated using the replica impregnation method. The two directions are (1) the loading direction parallel to the foaming direction where the cells are elongated (EL direction) and (2) the loading direction perpendicular to the foaming direction where the cell are equiaxed (EQ direction). The results show that the compression responses for both EL and EQ directions are isotropy. Micrographs and X-ray micro-computed tomography show that the degree of geometry anisotropy is not strong enough to results in mechanical property anisotropy.

Precision of fit between implant impression coping and implant replica pairs for three implant systems.

Science.gov (United States)

Nicoll, Roxanna J; Sun, Albert; Haney, Stephan; Turkyilmaz, Ilser

2013-01-01

The fabrication of an accurately fitting implant-supported fixed prosthesis requires multiple steps, the first of which is assembling the impression coping on the implant. An imprecise fit of the impression coping on the implant will cause errors that will be magnified in subsequent steps of prosthesis fabrication. The purpose of this study was to characterize the 3-dimensional (3D) precision of fit between impression coping and implant replica pairs for 3 implant systems. The selected implant systems represent the 3 main joint types used in implant dentistry: external hexagonal, internal trilobe, and internal conical. Ten impression copings and 10 implant replicas from each of the 3 systems, B (Brånemark System), R (NobelReplace Select), and A (NobelActive) were paired. A standardized aluminum test body was luted to each impression coping, and the corresponding implant replica was embedded in a stone base. A coordinate measuring machine was used to quantify the maximum range of displacement in a vertical direction as a function of the tightening force applied to the guide pin. Maximum angular displacement in a horizontal plane was measured as a function of manual clockwise or counterclockwise rotation. Vertical and rotational positioning was analyzed by using 1-way analysis of variance (ANOVA). The Fisher protected least significant difference (PLSD) multiple comparisons test of the means was applied when the F-test in the ANOVA was significant (α=.05). The mean and standard deviation for change in the vertical positioning of impression copings was 4.3 ±2.1 μm for implant system B, 2.8 ±4.2 μm for implant system R, and 20.6 ±8.8 μm for implant system A. The mean and standard deviation for rotational positioning was 3.21 ±0.98 degrees for system B, 2.58 ±1.03 degrees for system R, and 5.30 ±0.79 degrees for system A. The P-value for vertical positioning between groups A and B and between groups A and R was <.001. No significant differences were found for

Replica exchange enveloping distribution sampling (RE-EDS): A robust method to estimate multiple free-energy differences from a single simulation.

Science.gov (United States)

Sidler, Dominik; Schwaninger, Arthur; Riniker, Sereina

2016-10-21

In molecular dynamics (MD) simulations, free-energy differences are often calculated using free energy perturbation or thermodynamic integration (TI) methods. However, both techniques are only suited to calculate free-energy differences between two end states. Enveloping distribution sampling (EDS) presents an attractive alternative that allows to calculate multiple free-energy differences in a single simulation. In EDS, a reference state is simulated which "envelopes" the end states. The challenge of this methodology is the determination of optimal reference-state parameters to ensure equal sampling of all end states. Currently, the automatic determination of the reference-state parameters for multiple end states is an unsolved issue that limits the application of the methodology. To resolve this, we have generalised the replica-exchange EDS (RE-EDS) approach, introduced by Lee et al. [J. Chem. Theory Comput. 10, 2738 (2014)] for constant-pH MD simulations. By exchanging configurations between replicas with different reference-state parameters, the complexity of the parameter-choice problem can be substantially reduced. A new robust scheme to estimate the reference-state parameters from a short initial RE-EDS simulation with default parameters was developed, which allowed the calculation of 36 free-energy differences between nine small-molecule inhibitors of phenylethanolamine N-methyltransferase from a single simulation. The resulting free-energy differences were in excellent agreement with values obtained previously by TI and two-state EDS simulations.

Novel approach to the fabrication of an artificial small bone using a combination of sponge replica and electrospinning methods

Energy Technology Data Exchange (ETDEWEB)

Kim, Yang-Hee; Lee, Byong-Taek, E-mail: lbt@sch.ac.kr [Department of Biomedical Engineering and Materials, School of Medicine, Soonchunhyang University 366-1, Ssangyong-dong, Cheonan, Chungnam 330-090 (Korea, Republic of)

2011-06-15

In this study, a novel artificial small bone consisting of ZrO{sub 2}-biphasic calcium phosphate/polymethylmethacrylate-polycaprolactone-hydroxyapatite (ZrO{sub 2}-BCP/PMMA-PCL-HAp) was fabricated using a combination of sponge replica and electrospinning methods. To mimic the cancellous bone, the ZrO{sub 2}/BCP scaffold was composed of three layers, ZrO{sub 2}, ZrO{sub 2}/BCP and BCP, fabricated by the sponge replica method. The PMMA-PCL fibers loaded with HAp powder were wrapped around the ZrO{sub 2}/BCP scaffold using the electrospinning process. To imitate the Haversian canal region of the bone, HAp-loaded PMMA-PCL fibers were wrapped around a steel wire of 0.3 mm diameter. As a result, the bundles of fiber wrapped around the wires imitated the osteon structure of the cortical bone. Finally, the ZrO{sub 2}/BCP scaffold was surrounded by HAp-loaded PMMA-PCL composite bundles. After removal of the steel wires, the ZrO{sub 2}/BCP scaffold and bundles of HAp-loaded PMMA-PCL formed an interconnected structure resembling the human bone. Its diameter, compressive strength and porosity were approximately 12 mm, 5 MPa and 70%, respectively, and the viability of MG-63 osteoblast-like cells was determined to be over 90% by the MTT (3-(4, 5-dimethylthiazol-2-yl)-2, 5-diphenyltetrazolium bromide) assay. This artificial bone shows excellent cytocompatibility and is a promising bone regeneration material.

Three-dimensional morphological characterization of the skin surface micro-topography using a skin replica and changes with age.

Science.gov (United States)

Masuda, Y; Oguri, M; Morinaga, T; Hirao, T

2014-08-01

Skin surface micro-topography (SSMT), consisting of pores, ridges and furrows, reflects the skin condition and is an important factor determining the aesthetics of the skin. Most previous studies evaluating SSMT have employed two-dimensional image analysis of magnified pictures captured by a video microscope. To improve the accuracy of SSMT analysis, we established a three-dimensional (3D) analysis method for SSMT and developed various parameters including the skin ridge number, and applied the method to study the age-dependent change in skin. Confocal laser scanning microscopy was used for 3D measurement of the surface morphology of silicon replicas taken from the cheek. We then used these data to calculate the parameters that reflect the nature of SSTM including the skin ridge number using originally developed software. Employing a superscription technique, we investigated the variation in SSMT with age for replicas taken from the cheeks of 103 Japanese females (5-85 years old). The skin surface area and roughness, the area of pores, the area, length, depth and width of skin furrows and the number of skin ridges were examined. The surface roughness, the area of pores and the depth of skin furrows increased with age. The area and length of skin furrows and the number of skin ridges decreased with age. The method proposed to analyse SSMT three dimensionally is an effective tool with which to characterize the condition of the skin. © 2013 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

Parallel replica dynamics method for bistable stochastic reaction networks: Simulation and sensitivity analysis

Science.gov (United States)

Wang, Ting; Plecháč, Petr

2017-12-01

Stochastic reaction networks that exhibit bistable behavior are common in systems biology, materials science, and catalysis. Sampling of stationary distributions is crucial for understanding and characterizing the long-time dynamics of bistable stochastic dynamical systems. However, simulations are often hindered by the insufficient sampling of rare transitions between the two metastable regions. In this paper, we apply the parallel replica method for a continuous time Markov chain in order to improve sampling of the stationary distribution in bistable stochastic reaction networks. The proposed method uses parallel computing to accelerate the sampling of rare transitions. Furthermore, it can be combined with the path-space information bounds for parametric sensitivity analysis. With the proposed methodology, we study three bistable biological networks: the Schlögl model, the genetic switch network, and the enzymatic futile cycle network. We demonstrate the algorithmic speedup achieved in these numerical benchmarks. More significant acceleration is expected when multi-core or graphics processing unit computer architectures and programming tools such as CUDA are employed.

Parallel replica dynamics method for bistable stochastic reaction networks: Simulation and sensitivity analysis.

Science.gov (United States)

Wang, Ting; Plecháč, Petr

2017-12-21

Stochastic reaction networks that exhibit bistable behavior are common in systems biology, materials science, and catalysis. Sampling of stationary distributions is crucial for understanding and characterizing the long-time dynamics of bistable stochastic dynamical systems. However, simulations are often hindered by the insufficient sampling of rare transitions between the two metastable regions. In this paper, we apply the parallel replica method for a continuous time Markov chain in order to improve sampling of the stationary distribution in bistable stochastic reaction networks. The proposed method uses parallel computing to accelerate the sampling of rare transitions. Furthermore, it can be combined with the path-space information bounds for parametric sensitivity analysis. With the proposed methodology, we study three bistable biological networks: the Schlögl model, the genetic switch network, and the enzymatic futile cycle network. We demonstrate the algorithmic speedup achieved in these numerical benchmarks. More significant acceleration is expected when multi-core or graphics processing unit computer architectures and programming tools such as CUDA are employed.

Behavioural responses of dogs to asymmetrical tail wagging of a robotic dog replica.

Science.gov (United States)

Artelle, K A; Dumoulin, L K; Reimchen, T E

2011-03-01

Recent evidence suggests that bilateral asymmetry in the amplitude of tail wagging of domestic dogs (Canis familiaris) is associated with approach (right wag) versus withdrawal (left wag) motivation and may be the by-product of hemispheric dominance. We consider whether such asymmetry in motion of the tail, a crucial appendage in intra-specific communication in all canids, provides visual information to a conspecific leading to differential behaviour. To evaluate this, we experimentally investigated the approach behaviour of free-ranging dogs to the asymmetric tail wagging of a life-size robotic dog replica. Our data, involving 452 separate interactions, showed a significantly greater proportion of dogs approaching the model continuously without stopping when the tail wagged to the left, compared with a right wag, which was more likely to yield stops. While the results indicate that laterality of a wagging tail provides behavioural information to conspecifics, the responses are not readily integrated into the predicted behaviour based on hemispheric dominance.

Impact of airborne particle size, acoustic airflow and breathing pattern on delivery of nebulized antibiotic into the maxillary sinuses using a realistic human nasal replica.

Science.gov (United States)

Leclerc, Lara; Pourchez, Jérémie; Aubert, Gérald; Leguellec, Sandrine; Vecellio, Laurent; Cottier, Michèle; Durand, Marc

2014-09-01

Improvement of clinical outcome in patients with sinuses disorders involves targeting delivery of nebulized drug into the maxillary sinuses. We investigated the impact of nebulization conditions (with and without 100 Hz acoustic airflow), particle size (9.9 μm, 2.8 μm, 550 nm and 230 nm) and breathing pattern (nasal vs. no nasal breathing) on enhancement of aerosol delivery into the sinuses using a realistic nasal replica developed by our team. After segmentation of the airways by means of high-resolution computed tomography scans, a well-characterized nasal replica was created using a rapid prototyping technology. A total of 168 intrasinus aerosol depositions were performed with changes of aerosol particle size and breathing patterns under different nebulization conditions using gentamicin as a marker. The results demonstrate that the fraction of aerosol deposited in the maxillary sinuses is enhanced by use of submicrometric aerosols, e.g. 8.155 ± 1.476 mg/L of gentamicin in the left maxillary sinus for the 2.8 μm particles vs. 2.056 ± 0.0474 for the 550 nm particles. Utilization of 100-Hz acoustic airflow nebulization also produced a 2- to 3-fold increase in drug deposition in the maxillary sinuses (e.g. 8.155 ± 1.476 vs. 3.990 ± 1.690 for the 2.8 μm particles). Our study clearly shows that optimum deposition was achieved using submicrometric particles and 100-Hz acoustic airflow nebulization with no nasal breathing. It is hoped that our new respiratory nasal replica will greatly facilitate the development of more effective delivery systems in the future.

Measurements of hadron yields from the T2K replica target in the NA61/SHINE experiment for neutrino flux prediction in T2K

CERN Document Server

AUTHOR|(CDS)2086777

T2K is an accelerator-based long-baseline neutrino experiment in Japan. The main goal of the T2K experiment is a search for CP violation in the lepton sector by measuring electron (anti)neutrino appearance in a muon (anti)neutrino beam. Initial (anti)neutrino flux is produced in decays of hadrons which originate from the interactions and the re-interactions of a $30\\:$GeV proton beam with a $90\\:$cm long graphite target. Knowledge of the T2K neutrino flux is limited due to large hadron production uncertainties. A series of hadron production measurements were done to solve this problem, in the NA61/SHINE experiment at CERN. Measurements were performed with a proton beam and two target types: a thin graphite target and a replica of the T2K target. Work presented in this thesis concentrates on the T2K replica target data taken in 2010 and the development of the analysis and calibration software. The aim of these measurements is to fully constrain production of $\\pi^+$, $\\pi^-$, $K^+$, $K^-$ and $p$ coming from t...

Measurements of charged pion differential yields from the surface of the T2K replica target for incoming 31 GeV/c protons with the NA61/SHINE spectrometer at the CERN SPS

CERN Document Server

Abgrall, N.; Ajaz, M.; Ali, Y.; Andronov, E.; Anticic, T.; Antoniou, N.; Baatar, B.; Bay, F.; Blondel, A.; Blümer, J.; Bogomilov, M.; Brandin, A.; Bravar, A.; Brzychczyk, J.; Bunyatov, S.A.; Busygina, O.; Christakoglou, P.; Cirkovic, M.; Czopowicz, T.; Davis, N.; Debieux, S.; Dembinski, H.; Deveaux, M.; Diakonos, F.; Di Luise, S.; Dominik, W.; Dumarchez, J.; Dynowski, K.; Engel, R.; Ereditato, A.; Feofilov, G.A.; Fodor, Z.; Garibov, A.; Gazdzicki, M.; Golubeva, M.; Grebieszkow, K.; Grzeszczuk, A.; Guber, F.; Haesler, A.; Hasegawa, T.; Hervé, A.E.; Hierholzer, M.; Igolkin, S.; Ivashkin, A.; Johnson, S.R.; Kadija, K.; Kapoyannis, A.; Kaptur, E.; Kisiel, J.; Kobayashi, T.; Kolesnikov, V.I.; Kolev, D.; Kondratiev, V.P.; Korzenev, A.; Kowalik, K.; Kowalski, S.; Koziel, M.; Krasnoperov, A.; Kuich, M.; Kurepin, A.; Larsen, D.; László, A.; Lewicki, M.; Lyubushkin, V.V.; Mackowiak-Pawłowska, M.; Maksiak, B.; Malakhov, A.I.; Manic, D.; Marcinek, A.; Marino, A.D.; Marton, K.; Mathes, H.-J.; Matulewicz, T.; Matveev, V.; Melkumov, G.L.; Messerly, B.; Mills, G.B.; Morozov, S.; Mrówczynski, S.; Nagai, Y.; Nakadaira, T.; Naskret, M.; Nirkko, M.; Nishikawa, K.; Panagiotou, A.D.; Paolone, V.; Pavin, M.; Petukhov, O.; Pistillo, C.; Płaneta, R.; Popov, B.A.; Posiadała-Zezula, M.; Puławski, S.; Puzovic, J.; Rauch, W.; Ravonel, M.; Redij, A.; Renfordt, R.; Richter-Was, E.; Robert, A.; Röhrich, D.; Rondio, E.; Roth, M.; Rubbia, A.; Rumberger, B.T.; Rustamov, A.; Rybczynski, M.; Sadovsky, A.; Sakashita, K.; Sarnecki, R.; Schmidt, K.; Sekiguchi, T.; Selyuzhenkov, I.; Seryakov, A.; Seyboth, P.; Sgalaberna, D.; Shibata, M.; Słodkowski, M.; Staszel, P.; Stefanek, G.; Stepaniak, J.; Ströbele, H.; Šuša, T.; Szuba, M.; Tada, M.; Taranenko, A.; Tefelska, A.; Tefelski, D.; Tereshchenko, V.; Tsenov, R.; Turko, L.; Ulrich, R.; Unger, M.; Vassiliou, M.; Veberic, D.; Vechernin, V.V.; Vesztergombi, G.; Vinogradov, L.; Wilczek, A.; Włodarczyk, Z.; Wojtaszek-Szwarc, A.; Wyszynski, O.; Yarritu, K.; Zambelli, L.; Zimmerman, E.D.; Friend, M.; Galymov, V.; Hartz, M.; Hiraki, T.; Ichikawa, A.; Kubo, H.; Matsuoka, K.; Murakami, A.; Nakaya, T.; Suzuki, K.; Tzanov, M.; Yu, M.

2016-01-01

Measurements of particle emission from a replica of the T2K 90 cm-long carbon target were performed in the NA61/SHINE experiment at CERN SPS, using data collected during a high-statistics run in 2009. An efficient use of the long-target measurements for neutrino flux predictions in T2K requires dedicated reconstruction and analysis techniques. Fully-corrected differential yields of charged pions from the surface of the T2K replica target for incoming 31 GeV/c protons are presented. A possible strategy to implement these results into the T2K neutrino beam predictions is discussed and the propagation of the uncertainties of these results to the final neutrino flux is performed

Human skulls with turquoise inlays: pre hispanic origin or replicas?

International Nuclear Information System (INIS)

Silva V, Y.; Castillo M, M.T.; Bautista M, J.P.; Arenas A, J.

2006-01-01

The lack of archaeological context determining if the manufacture of two human skulls adorned with turquoise inlays have pre-Columbian origin or not (replicas), led to perform other studies. Under these conditions, besides orthodox methodology commonly used to assign chronology and cultural aspects as form, style, decoration, iconography, etc., it was necessary to obtain more results based on the use of characterization techniques. The techniques employed were Scanning Electron Microscopy (SEM), X-Ray Energy Dispersive Spectroscopy (EDS), Transmission Electron Microscopy (TEM) and Fourier Transform Infrared Spectroscopy (FTIR), in order to determine the manufacture techniques and chemical composition of the materials used for the cementant. SEM analysis showed the presence of zones composed by Ca, O, C and Al. In some cases Mg, Cl, Fe and Pb were identified. High concentration of Cu was present in all samples, due to residues of turquoise inlays (CuAI 6 (PO 4 ) 4 (OH) 8 (H 2 O) 4 ) with which the skulls were decorated. In the cementant was identified the Ca as base element of the cementant, as well as particles < 100 nm with irregular morphology and other amorphous zones. FTIR spectrums indicated the presence of organic substances that could be used as agglutinating in the cementant. The current work shows a progress identifying involved techniques in the manufacturing of two human skulls with turquoise inlays. (Author)

Replica Exchange Simulations of the Thermodynamics of Aβ Fibril Growth

Science.gov (United States)

Takeda, Takako; Klimov, Dmitri K.

2009-01-01

Abstract Replica exchange molecular dynamics and an all-atom implicit solvent model are used to probe the thermodynamics of deposition of Alzheimer's Aβ monomers on preformed amyloid fibrils. Consistent with the experiments, two deposition stages have been identified. The docking stage occurs over a wide temperature range, starting with the formation of the first peptide-fibril interactions at 500 K. Docking is completed when a peptide fully adsorbs on the fibril edge at the temperature of 380 K. The docking transition appears to be continuous, and occurs without free energy barriers or intermediates. During docking, incoming Aβ monomer adopts a disordered structure on the fibril edge. The locking stage occurs at the temperature of ≈360 K and is characterized by the rugged free energy landscape. Locking takes place when incoming Aβ peptide forms a parallel β-sheet structure on the fibril edge. Because the β-sheets formed by locked Aβ peptides are typically off-registry, the structure of the locked phase differs from the structure of the fibril interior. The study also reports that binding affinities of two distinct fibril edges with respect to incoming Aβ peptides are different. The peptides bound to the concave edge have significantly lower free energy compared to those bound on the convex edge. Comparison with the available experimental data is discussed. PMID:19167295

Autotransplantation of teeth using computer-aided rapid prototyping of a three-dimensional replica of the donor tooth: a systematic literature review.

Science.gov (United States)

Verweij, J P; Jongkees, F A; Anssari Moin, D; Wismeijer, D; van Merkesteyn, J P R

2017-11-01

This systematic review provides an overview of studies on autotransplantation techniques using rapid prototyping for preoperative fabrication of donor tooth replicas for preparation of the neo-alveolus. Different three-dimensional autotransplantation techniques and their treatment outcomes are discussed. The systematic literature search yielded 19 articles that satisfied the criteria for inclusion. These papers described one case-control study, four clinical observational studies, one study with a clinical and in vitro part, four in vitro studies, and nine case reports. The in vitro studies reported high accuracy for the printing and planning processes. The case reports all reported successful transplantation without any pathological signs. The clinical studies reported a short extraoral time of the donor tooth, with subsequent success and survival rates of 80.0-91.1% and 95.5-100%, respectively. The case-control study reported a significant decrease in extraoral time and high success rates with the use of donor tooth replicas. In conclusion, the use of a preoperatively designed surgical guide for autotransplantation enables accurate positional planning, increases the ease of surgery, and decreases the extraoral time. However, the quality of the existing body of evidence is low. Further research is therefore required to investigate the clinical advantages of this innovative autotransplantation technique. Copyright © 2017 International Association of Oral and Maxillofacial Surgeons. Published by Elsevier Ltd. All rights reserved.

Validation of the BUGJEFF311.BOLIB, BUGENDF70.BOLIB and BUGLE-B7 broad-group libraries on the PCA-Replica (H2O/Fe neutron shielding benchmark experiment

Directory of Open Access Journals (Sweden)

Pescarini Massimo

2016-01-01

Full Text Available The PCA-Replica 12/13 (H2O/Fe neutron shielding benchmark experiment was analysed using the TORT-3.2 3D SN code. PCA-Replica reproduces a PWR ex-core radial geometry with alternate layers of water and steel including a pressure vessel simulator. Three broad-group coupled neutron/photon working cross section libraries in FIDO-ANISN format with the same energy group structure (47 n + 20 γ and based on different nuclear data were alternatively used: the ENEA BUGJEFF311.BOLIB (JEFF-3.1.1 and UGENDF70.BOLIB (ENDF/B-VII.0 libraries and the ORNL BUGLE-B7 (ENDF/B-VII.0 library. Dosimeter cross sections derived from the IAEA IRDF-2002 dosimetry file were employed. The calculated reaction rates for the Rh-103(n,n′Rh-103m, In-115(n,n′In-115m and S-32(n,pP-32 threshold activation dosimeters and the calculated neutron spectra are compared with the corresponding experimental results.

Validation of the BUGJEFF311.BOLIB, BUGENDF70.BOLIB and BUGLE-B7 broad-group libraries on the PCA-Replica (H2O/Fe) neutron shielding benchmark experiment

Science.gov (United States)

Pescarini, Massimo; Orsi, Roberto; Frisoni, Manuela

2016-03-01

The PCA-Replica 12/13 (H2O/Fe) neutron shielding benchmark experiment was analysed using the TORT-3.2 3D SN code. PCA-Replica reproduces a PWR ex-core radial geometry with alternate layers of water and steel including a pressure vessel simulator. Three broad-group coupled neutron/photon working cross section libraries in FIDO-ANISN format with the same energy group structure (47 n + 20 γ) and based on different nuclear data were alternatively used: the ENEA BUGJEFF311.BOLIB (JEFF-3.1.1) and UGENDF70.BOLIB (ENDF/B-VII.0) libraries and the ORNL BUGLE-B7 (ENDF/B-VII.0) library. Dosimeter cross sections derived from the IAEA IRDF-2002 dosimetry file were employed. The calculated reaction rates for the Rh-103(n,n')Rh-103m, In-115(n,n')In-115m and S-32(n,p)P-32 threshold activation dosimeters and the calculated neutron spectra are compared with the corresponding experimental results.

Perovskite Quantum Dots Modeled Using ab Initio and Replica Exchange Molecular Dynamics

KAUST Repository

Buin, Andrei; Comin, Riccardo; Ip, Alexander H.; Sargent, Edward H.

2015-01-01

© 2015 American Chemical Society. Organometal halide perovskites have recently attracted tremendous attention at both the experimental and theoretical levels. Much of this work has been dedicated to bulk material studies, yet recent experimental work has shown the formation of highly efficient quantum-confined nanocrystals with tunable band edges. Here we investigate perovskite quantum dots from theory, predicting an upper bound of the Bohr radius of 45 Å that agrees well with literature values. When the quantum dots are stoichiometric, they are trap-free and have nearly symmetric contributions to confinement from the valence and conduction bands. We further show that surface-associated conduction bandedge states in perovskite nanocrystals lie below the bulk states, which could explain the difference in Urbach tails between mesoporous and planar perovskite films. In addition to conventional molecular dynamics (MD), we implement an enhanced phase-space sampling algorithm, replica exchange molecular dynamics (REMD). We find that in simulation of methylammonium orientation and global minima, REMD outperforms conventional MD. To the best of our knowledge, this is the first REMD implementation for realistic-sized systems in the realm of DFT calculations.

Perovskite Quantum Dots Modeled Using ab Initio and Replica Exchange Molecular Dynamics

KAUST Repository

Buin, Andrei

2015-06-18

© 2015 American Chemical Society. Organometal halide perovskites have recently attracted tremendous attention at both the experimental and theoretical levels. Much of this work has been dedicated to bulk material studies, yet recent experimental work has shown the formation of highly efficient quantum-confined nanocrystals with tunable band edges. Here we investigate perovskite quantum dots from theory, predicting an upper bound of the Bohr radius of 45 Å that agrees well with literature values. When the quantum dots are stoichiometric, they are trap-free and have nearly symmetric contributions to confinement from the valence and conduction bands. We further show that surface-associated conduction bandedge states in perovskite nanocrystals lie below the bulk states, which could explain the difference in Urbach tails between mesoporous and planar perovskite films. In addition to conventional molecular dynamics (MD), we implement an enhanced phase-space sampling algorithm, replica exchange molecular dynamics (REMD). We find that in simulation of methylammonium orientation and global minima, REMD outperforms conventional MD. To the best of our knowledge, this is the first REMD implementation for realistic-sized systems in the realm of DFT calculations.

Simulated tempering distributed replica sampling: A practical guide to enhanced conformational sampling

Energy Technology Data Exchange (ETDEWEB)

Rauscher, Sarah; Pomes, Regis, E-mail: pomes@sickkids.ca

2010-11-01

Simulated tempering distributed replica sampling (STDR) is a generalized-ensemble method designed specifically for simulations of large molecular systems on shared and heterogeneous computing platforms [Rauscher, Neale and Pomes (2009) J. Chem. Theor. Comput. 5, 2640]. The STDR algorithm consists of an alternation of two steps: (1) a short molecular dynamics (MD) simulation; and (2) a stochastic temperature jump. Repeating these steps thousands of times results in a random walk in temperature, which allows the system to overcome energetic barriers, thereby enhancing conformational sampling. The aim of the present paper is to provide a practical guide to applying STDR to complex biomolecular systems. We discuss the details of our STDR implementation, which is a highly-parallel algorithm designed to maximize computational efficiency while simultaneously minimizing network communication and data storage requirements. Using a 35-residue disordered peptide in explicit water as a test system, we characterize the efficiency of the STDR algorithm with respect to both diffusion in temperature space and statistical convergence of structural properties. Importantly, we show that STDR provides a dramatic enhancement of conformational sampling compared to a canonical MD simulation.

Foundations and latest advances in replica exchange transition interface sampling

Science.gov (United States)

Cabriolu, Raffaela; Skjelbred Refsnes, Kristin M.; Bolhuis, Peter G.; van Erp, Titus S.

2017-10-01

Nearly 20 years ago, transition path sampling (TPS) emerged as an alternative method to free energy based approaches for the study of rare events such as nucleation, protein folding, chemical reactions, and phase transitions. TPS effectively performs Monte Carlo simulations with relatively short molecular dynamics trajectories, with the advantage of not having to alter the actual potential energy surface nor the underlying physical dynamics. Although the TPS approach also introduced a methodology to compute reaction rates, this approach was for a long time considered theoretically attractive, providing the exact same results as extensively long molecular dynamics simulations, but still expensive for most relevant applications. With the increase of computer power and improvements in the algorithmic methodology, quantitative path sampling is finding applications in more and more areas of research. In particular, the transition interface sampling (TIS) and the replica exchange TIS (RETIS) algorithms have, in turn, improved the efficiency of quantitative path sampling significantly, while maintaining the exact nature of the approach. Also, open-source software packages are making these methods, for which implementation is not straightforward, now available for a wider group of users. In addition, a blooming development takes place regarding both applications and algorithmic refinements. Therefore, it is timely to explore the wide panorama of the new developments in this field. This is the aim of this article, which focuses on the most efficient exact path sampling approach, RETIS, as well as its recent applications, extensions, and variations.

Measurements of π{sup ±} differential yields from the surface of the T2K replica target for incoming 31 GeV/c protons with the NA61/SHINE spectrometer at the CERN SPS

Energy Technology Data Exchange (ETDEWEB)

Abgrall, N.; Ajaz, M.; Blondel, A.; Bravar, A.; Debieux, S.; Haesler, A.; Korzenev, A.; Ravonel, M. [University of Geneva, Geneva (Switzerland); Aduszkiewicz, A.; Dominik, W.; Kuich, M.; Matulewicz, T.; Posiadala-Zezula, M. [University of Warsaw, Warsaw (Poland); Ali, Y. [Jagiellonian University, Cracow (Poland); COMSATS Institute of Information Technology, Department of Physics, Islamabad (Pakistan); Andronov, E.; Feofilov, G.A.; Igolkin, S.; Kondratiev, V.P.; Seryakov, A.; Vechernin, V.V.; Vinogradov, L. [St. Petersburg State University, Saint Petersburg (Russian Federation); Anticic, T.; Kadija, K.; Susa, T. [Ruder Boskovic Institute, Zagreb (Croatia); Antoniou, N.; Christakoglou, P.; Davis, N.; Diakonos, F.; Kapoyannis, A.; Panagiotou, A.D.; Vassiliou, M. [University of Athens, Athens (Greece); Baatar, B.; Bunyatov, S.A.; Kolesnikov, V.I.; Krasnoperov, A.; Lyubushkin, V.V.; Malakhov, A.I.; Matveev, V.; Melkumov, G.L.; Tereshchenko, V. [Joint Institute for Nuclear Research, Dubna (Russian Federation); Bay, F.; Di Luise, S.; Rubbia, A.; Sgalaberna, D. [ETH Zuerich, Zuerich (Switzerland); Bluemer, J.; Dembinski, H.; Engel, R.; Herve, A.E.; Mathes, H.J.; Roth, M.; Szuba, M.; Ulrich, R.; Unger, M.; Veberic, D. [Karlsruhe Institute of Technology, Karlsruhe (Germany); Bogomilov, M.; Kolev, D.; Tsenov, R. [University of Sofia, Faculty of Physics, Sofia (Bulgaria); Brandin, A.; Selyuzhenkov, I.; Taranenko, A. [National Research Nuclear University ' ' MEPhI' ' (Moscow Engineering Physics Institute), Moscow (Russian Federation); Brzychczyk, J.; Larsen, D.; Planeta, R.; Richter-Was, E.; Staszel, P.; Wyszynski, O. [Jagiellonian University, Cracow (Poland); Busygina, O.; Golubeva, M.; Guber, F.; Ivashkin, A.; Kurepin, A.; Sadovsky, A. [Institute for Nuclear Research, Moscow (Russian Federation); Cirkovic, M.; Manic, D.; Puzovic, J. [University of Belgrade, Belgrade (Serbia); Czopowicz, T.; Dynowski, K.; Grebieszkow, K.; Mackowiak-Pawlowska, M.; Maksiak, B.; Sarnecki, R.; Slodkowski, M.; Tefelska, A.; Tefelski, D. [Warsaw University of Technology, Warsaw (Poland); Deveaux, M.; Koziel, M.; Renfordt, R.; Stroebele, H. [University of Frankfurt, Frankfurt (Germany); Dumarchez, J.; Robert, A. [LPNHE, University of Paris VI and VII, Paris (France); Ereditato, A.; Hierholzer, M.; Nirkko, M.; Pistillo, C.; Redij, A. [University of Bern, Bern (Switzerland); Fodor, Z. [Wigner Research Centre for Physics of the Hungarian Academy of Sciences, Budapest (Hungary); University of Wroclaw, Wroclaw (Poland); Garibov, A. [National Nuclear Research Center, Baku (Azerbaijan); Gazdzicki, M. [University of Frankfurt, Frankfurt (Germany); Jan Kochanowski University in Kielce, Kielce (Poland); Grzeszczuk, A.; Kaptur, E.; Kisiel, J.; Kowalski, S.; Pulawski, S.; Schmidt, K.; Wilczek, A. [University of Silesia, Katowice (Poland); Hasegawa, T.; Kobayashi, T.; Nakadaira, T.; Nishikawa, K.; Sakashita, K.; Sekiguchi, T.; Shibata, M.; Tada, M.; Friend, M. [Institute for Particle and Nuclear Studies, Tsukuba (Japan); Johnson, S.R.; Marino, A.D.; Rumberger, B.T.; Zimmerman, E.D. [University of Colorado, Boulder (United States); Kowalik, K.; Rondio, E.; Stepaniak, J. [National Centre for Nuclear Research, Warsaw (Poland); Laszlo, A.; Marton, K.; Vesztergombi, G. [Wigner Research Centre for Physics of the Hungarian Academy of Sciences, Budapest (Hungary); Lewicki, M.; Naskret, M.; Turko, L. [University of Wroclaw, Wroclaw (Poland); Marcinek, A. [Jagiellonian University, Cracow (Poland); University of Wroclaw, Wroclaw (PL); Messerly, B.; Nagai, Y.; Paolone, V. [University of Pittsburgh, Pittsburgh (US); Mills, G.B.; Yarritu, K. [Los Alamos National Laboratory, Los Alamos (US); Morozov, S.; Petukhov, O. [Institute for Nuclear Research, Moscow (RU); National Research Nuclear University ' ' MEPhI' ' (Moscow Engineering Physics Institute), Moscow (RU); Mrowczynski, S.; Rybczynski, M.; Seyboth, P.; Stefanek, G.; Wlodarczyk, Z.; Wojtaszek-Szwarc, A. [Jan Kochanowski University in Kielce, Kielce (PL); Pavin, M. [Ruder Boskovic Institute, Zagreb (HR); LPNHE, University of Paris VI and VII, Paris (FR); Popov, B.A. [LPNHE, University of Paris VI and VII, Paris (FR); Joint Institute for Nuclear Research, Dubna (RU); Rauch, W. [Fachhochschule Frankfurt, Frankfurt (DE); Roehrich, D. [University of Bergen, Bergen (NO); Rustamov, A. [National Nuclear Research Center, Baku (AZ); University of Frankfurt, Frankfurt (DE); Zambelli, L. [LPNHE, University of Paris VI and VII, Paris (FR); Institute for Particle and Nuclear Studies, Tsukuba (JP); Galymov, V. [IPNL, University of Lyon, Villeurbanne (FR); Hartz, M. [Kavli Institute for the Physics and Mathematics of the Universe (WPI), The University of Tokyo Institutes for Advanced Study, University of Tokyo, Kashiwa, Chiba (JP); TRIUMF, Vancouver, BC (CA); Hiraki, T.; Ichikawa, A.; Kubo, H.; Matsuoka, K.; Murakami, A.; Nakaya, T.; Suzuki, K. [Kyoto University, Department of Physics, Kyoto (JP); Tzanov, M. [Louisiana State University, Department of Physics and Astronomy, Baton Rouge, LA (US); Yu, M. [York University, Department of Physics and Astronomy, Toronto, ON (CA); Collaboration: NA61/SHINE Collaboration

2016-11-15

Measurements of particle emission from a replica of the T2K 90 cm-long carbon target were performed in the NA61/SHINE experiment at CERN SPS, using data collected during a high-statistics run in 2009. An efficient use of the long-target measurements for neutrino flux predictions in T2K requires dedicated reconstruction and analysis techniques. Fully-corrected differential yields of π{sup ±}-mesons from the surface of the T2K replica target for incoming 31 GeV/c protons are presented. A possible strategy to implement these results into the T2K neutrino beam predictions is discussed and the propagation of the uncertainties of these results to the final neutrino flux is performed. (orig.)

Development of tire road noise chassis-dynamometer simulator. Effect of ISO surface replica model pad on tire road noise; Shisakushita tire romen soon shiken`yo jissha daijo simulator ni tsuite. ISO romen mogi pad wo sochakushita koka ni kansuru kisoteki kento

Energy Technology Data Exchange (ETDEWEB)

Tanaka, T; Murakami, T; Ogata, S; Sakamoto, I [Traffic Safety and Nuisance Research Inst., Tokyo (Japan)

1997-10-01

As a new test facility to clarify noise reduction method of tire road noise, Tire Road Noise Chassis-Dynamometer Simulator was developed. ISO surface replica pads made by copying the texture of ISO surface were attached on the roller surface of this system to simulate tire road noise. This paper described the specifications and characteristics of this system, and the effects of ISO surface replica pads on tire noise measurement by comparing the sound intensity in horizontal plane of tire noise measured in this system with that measured in a single drum tester with safety walk surface. 4 refs., 10 figs., 1 tab.

Computing Relative Free Energies of Solvation using Single Reference Thermodynamic Integration Augmented with Hamiltonian Replica Exchange.

Science.gov (United States)

Khavrutskii, Ilja V; Wallqvist, Anders

2010-11-09

This paper introduces an efficient single-topology variant of Thermodynamic Integration (TI) for computing relative transformation free energies in a series of molecules with respect to a single reference state. The presented TI variant that we refer to as Single-Reference TI (SR-TI) combines well-established molecular simulation methodologies into a practical computational tool. Augmented with Hamiltonian Replica Exchange (HREX), the SR-TI variant can deliver enhanced sampling in select degrees of freedom. The utility of the SR-TI variant is demonstrated in calculations of relative solvation free energies for a series of benzene derivatives with increasing complexity. Noteworthy, the SR-TI variant with the HREX option provides converged results in a challenging case of an amide molecule with a high (13-15 kcal/mol) barrier for internal cis/trans interconversion using simulation times of only 1 to 4 ns.

Replica analysis of overfitting in regression models for time-to-event data

Science.gov (United States)

Coolen, A. C. C.; Barrett, J. E.; Paga, P.; Perez-Vicente, C. J.

2017-09-01

Overfitting, which happens when the number of parameters in a model is too large compared to the number of data points available for determining these parameters, is a serious and growing problem in survival analysis. While modern medicine presents us with data of unprecedented dimensionality, these data cannot yet be used effectively for clinical outcome prediction. Standard error measures in maximum likelihood regression, such as p-values and z-scores, are blind to overfitting, and even for Cox’s proportional hazards model (the main tool of medical statisticians), one finds in literature only rules of thumb on the number of samples required to avoid overfitting. In this paper we present a mathematical theory of overfitting in regression models for time-to-event data, which aims to increase our quantitative understanding of the problem and provide practical tools with which to correct regression outcomes for the impact of overfitting. It is based on the replica method, a statistical mechanical technique for the analysis of heterogeneous many-variable systems that has been used successfully for several decades in physics, biology, and computer science, but not yet in medical statistics. We develop the theory initially for arbitrary regression models for time-to-event data, and verify its predictions in detail for the popular Cox model.

Additive Manufacturing: A Comparative Analysis of Dimensional Accuracy and Skin Texture Reproduction of Auricular Prostheses Replicas.

Science.gov (United States)

Unkovskiy, Alexey; Spintzyk, Sebastian; Axmann, Detlef; Engel, Eva-Maria; Weber, Heiner; Huettig, Fabian

2017-11-10

The use of computer-aided design/computer-aided manufacturing (CAD/CAM) and additive manufacturing in maxillofacial prosthetics has been widely acknowledged. Rapid prototyping can be considered for manufacturing of auricular prostheses. Therefore, so-called prostheses replicas can be fabricated by digital means. The objective of this study was to identify a superior additive manufacturing method to fabricate auricular prosthesis replicas (APRs) within a digital workflow. Auricles of 23 healthy subjects (mean age of 37.8 years) were measured in vivo with respect to an anthropometrical protocol. Landmarks were volumized with fiducial balls for 3D scanning using a handheld structured light scanner. The 3D CAD dataset was postprocessed, and the same anthropometrical measurements were made in the CAD software with the digital lineal. Each CAD dataset was materialized using fused deposition modeling (FDM), selective laser sintering (SLS), and stereolithography (SL), constituting 53 APR samples. All distances between the landmarks were measured on the APRs. After the determination of the measurement error within the five data groups (in vivo, CAD, FDM, SLS, and SL), the mean values were compared using matched pairs method. To this, the in vivo and CAD dataset were set as references. Finally, the surface structure of the APRs was qualitatively evaluated with stereomicroscopy and profilometry to ascertain the level of skin detail reproduction. The anthropometrical approach showed drawbacks in measuring the protrusion of the ear's helix. The measurement error within all groups of measurements was calculated between 0.20 and 0.28 mm, implying a high reproducibility. The lowest mean differences of 53 produced APRs were found in FDM (0.43%) followed by SLS (0.54%) and SL (0.59%)--compared to in vivo, and again in FDM (0.20%) followed by SL (0.36%) and SLS (0.39%)--compared to CAD. None of these values exceed the threshold of clinical relevance (1.5%); however, the qualitative

DOT 3.5-E (DOT 3.5-E/JEF-1) analysis of the PCA-Replica (H2O/FE) shielding benchmark for the LWR-PV damage prediction

International Nuclear Information System (INIS)

Pescarini, M.

1991-01-01

The results of a DOT 3.5-E/JEF-1 validation on the (H2O/Fr) PCA-REPLICA (UKAEA-Winfith) low-flux shielding benchmark are presented. The PCA-REPLICA experiments reproduces the excore radial geometry of a PWR and is closely related to LWR safety since it is dedicated to test the accuracy of the calculated neutron exposure parameters (fast fluence and iron displacement rates) in a pressure vessel simulator. The NJOY/THEMIS data processing system is employed to obtain the neutron damage-energy cross sections for the JEF-1 iron file. The SN 1-D ANISN code is used to collapse cross sections from the VITAMIN-J (175 n) shielding library, based on the JEF-1 data, to a 28 group working library for 2-D calculations. A 3-D-equivalent synthesis (X,Y,Z) of 2-D and 1-D DOT 3.5-E SN calculations in a plane geometry, gives the integral and spectral results for comparison with the respective experimental data. The underprediction of the in-vessel dosimeter experimental activities depends probably on an overestimation of the iron inelastic scattering cross section of the JEF-1 file

Replicas in Cultural Heritage: 3d Printing and the Museum Experience

Science.gov (United States)

Ballarin, M.; Balletti, C.; Vernier, P.

2018-05-01

3D printing has seen a recent massive diffusion for several applications, not least the field of Cultural Heritage. Being used for different purposes, such as study, analysis, conservation or access in museum exhibitions, 3D printed replicas need to undergo a process of validation also in terms of metrical precision and accuracy. The Laboratory of Photogrammetry of Iuav University of Venice has started several collaborations with Italian museum institutions firstly for the digital acquisition and then for the physical reproduction of objects of historical and artistic interest. The aim of the research is to analyse the metric characteristics of the printed model in relation to the original data, and to optimize the process that from the survey leads to the physical representation of an object. In fact, this could be acquired through different methodologies that have different precisions (multi-image photogrammetry, TOF laser scanner, triangulation based laser scanner), and it always involves a long processing phase. It should not be forgotten that the digital data have to undergo a series of simplifications, which, on one hand, eliminate the noise introduced by the acquisition process, but on the other one, they can lead to discrepancies between the physical copy and the original geometry. In this paper we will show the results obtained on a small archaeological find that was acquired and reproduced for a museum exhibition intended for blind and partially sighted people.

An application of computer image-processing and filmy replica technique to the copper electroplating method of stress analysis

Science.gov (United States)

Sugiura, M.; Seika, M.

1994-02-01

In this study, a new technique to measure the density of slip-bands automatically is developed, namely, a TV image of the slip-bands observed through a microscope is directly processed by an image-processing system using a personal computer and an accurate value of the density of slip-bands is measured quickly. In the case of measuring the local stresses in machine parts of large size with the copper plating foil, the direct observation of slip-bands through an optical microscope is difficult. In this study, to facilitate a technique close to the direct microscopic observation of slip-bands in the foil attached to a large-sized specimen, the replica method using a platic film of acetyl cellulose is applied to replicate the slip-bands in the attached foil.

Dynamical replica analysis of processes on finitely connected random graphs: II. Dynamics in the Griffiths phase of the diluted Ising ferromagnet

International Nuclear Information System (INIS)

Mozeika, A; Coolen, A C C

2009-01-01

We study the Glauber dynamics of Ising spin models with random bonds, on finitely connected random graphs. We generalize a recent dynamical replica theory with which to predict the evolution of the joint spin-field distribution, to include random graphs with arbitrary degree distributions. The theory is applied to Ising ferromagnets on randomly diluted Bethe lattices, where we study the evolution of the magnetization and the internal energy. It predicts a prominent slowing down of the flow in the Griffiths phase, it suggests a further dynamical transition at lower temperatures within the Griffiths phase, and it is verified quantitatively by the results of Monte Carlo simulations

Conformational Ensembles of α-Synuclein Derived Peptide with Different Osmolytes from Temperature Replica Exchange Sampling

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Salma Jamal

2017-12-01

Full Text Available Intrinsically disordered proteins (IDP are a class of proteins that do not have a stable three-dimensional structure and can adopt a range of conformations playing various vital functional role. Alpha-synuclein is one such IDP which can aggregate into toxic protofibrils and has been associated largely with Parkinson's disease (PD along with other neurodegenerative diseases. Osmolytes are small organic compounds that can alter the environment around the proteins by acting as denaturants or protectants for the proteins. In the present study, we have conducted a series of replica exchange molecular dynamics simulations to explore the role of osmolytes, urea which is a denaturant and TMAO (trimethylamine N-oxide, a protecting osmolyte, in aggregation and conformations of the synuclein peptide. We observed that both the osmolytes have significantly distinct impacts on the peptide and led to transitions of the conformations of the peptide from one state to other. Our findings highlighted that urea attenuated peptide aggregation and resulted in the formation of extended peptide structures whereas TMAO led to compact and folded forms of the peptide.

Effect of boundary conditions on the strength and deformability of replicas of natural fractures in welded tuff

International Nuclear Information System (INIS)

Wibowo, J.; Amadei, B.; Sture, S.; Robertson, A.B.

1993-09-01

Four series of cyclic direct-shear experiments were conducted on several replicas of three natural fractures and a tensile fracture of welded tuff from Yucca Mountain. The objective of these tests was to examine the effect of cyclic loading on joint shear behavior under different boundary conditions. The shear tests were performed under either different levels of constant normal load ranging between 0.6 and 25.6 kips (2.7 and 113.9 kN) or constant normal stiffness ranging between 14.8 and 187.5 kips/in (25.9 and 328.1 kn/cm) . Bach test in the two categories consisted of five cycles of forward and reverse shear. Normal compression tests were also performed both before and after each shear experiment to measure changes in joint normal deformability. In order to quantify fracture surface damage during shear, fracture-surface fractal dimensions were obtained from measurements before and after shear

Measuring depths of sub-micron tracks in a CR-39 detector from replicas using Atomic Force Microscopy

International Nuclear Information System (INIS)

Yu, K.N.; Ng, F.M.F.; Nikezic, D.

2005-01-01

One of the challenging tasks in the application of solid-state nuclear track detectors (SSNTDs) is the measurement of the depth of the tracks, in particular, the shallow ones resulting from short etching periods. In the present work, a method is proposed to prepare replicas of tracks from α particles in the CR-39 SSNTDs and to measure their heights using atomic force microscopy (AFM). After irradiation, the detectors were etched in a 6.25N aqueous solution of NaOH maintained at 70 deg. C. The etched detectors were immersed into a beaker of the replicating fluid, which was placed in a water bath under ultrasonic vibration and maintained at room temperature to facilitate the filling of the etched tracks with the replicating fluid. As an example of application, these results have been used to derive a V function for the CR-39 detectors used in the present study (for the specified etching conditions)

A replica exchange transition interface sampling method with multiple interface sets for investigating networks of rare events

Science.gov (United States)

Swenson, David W. H.; Bolhuis, Peter G.

2014-07-01

The multiple state transition interface sampling (TIS) framework in principle allows the simulation of a large network of complex rare event transitions, but in practice suffers from convergence problems. To improve convergence, we combine multiple state TIS [J. Rogal and P. G. Bolhuis, J. Chem. Phys. 129, 224107 (2008)] with replica exchange TIS [T. S. van Erp, Phys. Rev. Lett. 98, 268301 (2007)]. In addition, we introduce multiple interface sets, which allow more than one order parameter to be defined for each state. We illustrate the methodology on a model system of multiple independent dimers, each with two states. For reaction networks with up to 64 microstates, we determine the kinetics in the microcanonical ensemble, and discuss the convergence properties of the sampling scheme. For this model, we find that the kinetics depend on the instantaneous composition of the system. We explain this dependence in terms of the system's potential and kinetic energy.

Evaluation of unrestrained replica-exchange simulations using dynamic walkers in temperature space for protein structure refinement.

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Mark A Olson

Full Text Available A central problem of computational structural biology is the refinement of modeled protein structures taken from either comparative modeling or knowledge-based methods. Simulations are commonly used to achieve higher resolution of the structures at the all-atom level, yet methodologies that consistently yield accurate results remain elusive. In this work, we provide an assessment of an adaptive temperature-based replica exchange simulation method where the temperature clients dynamically walk in temperature space to enrich their population and exchanges near steep energetic barriers. This approach is compared to earlier work of applying the conventional method of static temperature clients to refine a dataset of conformational decoys. Our results show that, while an adaptive method has many theoretical advantages over a static distribution of client temperatures, only limited improvement was gained from this strategy in excursions of the downhill refinement regime leading to an increase in the fraction of native contacts. To illustrate the sampling differences between the two simulation methods, energy landscapes are presented along with their temperature client profiles.

Large sample NAA of a pottery replica utilizing thermal neutron flux at AHWR critical facility and X-Z rotary scanning unit

International Nuclear Information System (INIS)

Acharya, R.; Dasari, K.B.; Pujari, P.K.; Swain, K.K.; Shinde, A.D.; Reddy, A.V.R.

2013-01-01

Large sample neutron activation analysis (LSNAA) of a clay pottery replica from Peru was carried out using low neutron flux graphite reflector position of Advanced Heavy Water Reactor (AHWR) critical facility. This work was taken up as a part of inter-comparison exercise under IAEA CRP on LSNAA of archaeological objects. Irradiated large size sample, placed on an X-Z rotary scanning unit, was assayed using a 40% relative efficiency HPGe detector. The k 0 -based internal monostandard NAA (IM-NAA) in conjunction with insitu relative detection efficiency was used to calculate concentration ratios of 12 elements with respect to Na. Analyses of both small and large size samples were carried out to check homogeneity and to arrive at absolute concentrations. (author)

Replica exchange simulation of reversible folding/unfolding of the Trp-cage miniprotein in explicit solvent: on the structure and possible role of internal water.

Science.gov (United States)

Paschek, Dietmar; Nymeyer, Hugh; García, Angel E

2007-03-01

We simulate the folding/unfolding equilibrium of the 20-residue miniprotein Trp-cage. We use replica exchange molecular dynamics simulations of the AMBER94 atomic detail model of the protein explicitly solvated by water, starting from a completely unfolded configuration. We employ a total of 40 replicas, covering the temperature range between 280 and 538 K. Individual simulation lengths of 100 ns sum up to a total simulation time of about 4 micros. Without any bias, we observe the folding of the protein into the native state with an unfolding-transition temperature of about 440 K. The native state is characterized by a distribution of root mean square distances (RMSD) from the NMR data that peaks at 1.8A, and is as low as 0.4A. We show that equilibration times of about 40 ns are required to yield convergence. A folded configuration in the entire extended ensemble is found to have a lifetime of about 31 ns. In a clamp-like motion, the Trp-cage opens up during thermal denaturation. In line with fluorescence quenching experiments, the Trp-residue sidechain gets hydrated when the protein opens up, roughly doubling the number of water molecules in the first solvation shell. We find the helical propensity of the helical domain of Trp-cage rather well preserved even at very high temperatures. In the folded state, we can identify states with one and two buried internal water molecules interconnecting parts of the Trp-cage molecule by hydrogen bonds. The loss of hydrogen bonds of these buried water molecules in the folded state with increasing temperature is likely to destabilize the folded state at elevated temperatures.

From Dalek half balls to Daft Punk helmets: Mimetic fandom and the crafting of replicas

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Matt Hills

2014-06-01

Full Text Available Mimetic fandom is a surprisingly understudied mode of (culturally masculinized fan activity in which fans research and craft replica props. Mimetic fandom can be considered as (inauthentic and (immaterial, combining noncommercial status with grassroots marketing or brand reinforcement as well as fusing an emphasis on material artifacts with Web 2.0 collective intelligence. Simply analyzing mimetic fandom as part of fannish material culture fails to adequately assess the nonmaterial aspects of this collaborative creativity. Two fan cultures are taken as case studies: Dalek building groups and Daft Punk helmet constructors. These diverse cases indicate that mimetic fandom has a presence and significance that moves across media fandoms and is not restricted to the science fiction, fantasy, and horror followings with which it is most often associated. Mimetic fandom may be theorized as an oscillatory activity that confuses binaries and constructions of (academic/fan authenticity. This fan practice desires and pursues a kind of ontological bridging or unity—from text to reality—that is either absent or less dominant in many other fan activities such as cosplay, screen-used prop collecting, and geographical pilgrimage. Fan studies may benefit from reassessing the place of mimesis, especially in order to theorize fan practices that are less clearly transformative in character.

Replica of human dentin treated with different desensitizing agents: a methodological SEM study in vitro

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Pereira Jose Carlos

2002-01-01

Full Text Available This is a preliminary study to determine a methodological sequence in vitro which may allow the reproduction of dentin for SEM analysis, after the use of different desensitizing agents. Dentin discs obtained from extracted human third molars were etched with 6% citric acid, an artificial smear layer was created and the surface dentin discs were divided into four quadrants. Quadrants 2, 3 and 4 of each disc were conditioned with 6% citric acid. The desensitizing agents (Oxa-Gel®, Gluma Desensitizer and an experimental agent were applied to quadrants 3 and 4. To evaluate the acid resistance of the treatment, quadrant 4 was etched again with 6% citric acid. An impression was then taken with Aquasil ULV. After a setting period of 6 min, each disc was removed from the impression and stored in a moist-free environment for 24 h at 37ºC. After that time, a low-viscosity epoxy resin (Araltec GY 1109 BR was poured into the impression and cured for 24 h. All specimens were metal-coated for SEM analysis. Comparison of the photomicrographs of dentin discs with their respective impressions and resin replicas showed that this technique can reproduce the characteristics of the dentin surface treated with desensitizing agents.

Trillo NPP full scope replica simulator project: The last great NPP simulation challenge in Spain

International Nuclear Information System (INIS)

Rivero, N.; Abascal, A.

2006-01-01

In the year 2000, Trillo NPP (Spanish PWR-KWU design nuclear power plant) and Tecnatom came to the agreement of developing a Trillo plant specific simulator, having as scope all the plant systems operated either from the main control room or from the emergency panels. The simulator operation should be carried out both through a control room replica and graphical user interface, this latter based on plant schematics and softpanels concept. Trillo simulator is to be primarily utilized as a pedagogical tool for the Trillo operational staff training. Because the engineering grade of the mathematical models, it will also have additional uses, such as: - Operation engineering (POE's validation, New Computerized Operator Support Systems Validation, etc).; - Emergency drills; -Plant design modifications assessment. This project has become the largest simulation task Tecnatom has ever undertaken, being structured in three different subprojects, namely: - Simulator manufacture, Simulator acceptance and Training material production. Most relevant technological innovations the project brings are: Highest accuracy in the Nuclear Island models, Advanced Configuration Management System, Open Software architecture, Human machine interface new design, Latest design I/O system and an Instructor Station with extended functionality. The Trillo simulator 'Ready for Training' event is due on September 2003, having started the Factory Acceptance Tests in Autumn 2002. (author)

Ultra-Fine Bubble Distributions in a Plant Factory Observed by Transmission Electron Microscope with a Freeze-Fracture Replica Technique

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Tsutomu Uchida

2018-03-01

Full Text Available Water containing ultra-fine bubbles (UFB may promote plant growth. But, as UFBs are too small to distinguish from other impurities in a nutrient solution, it is not known if UFBs survive transport from the water source to the rhizosphere. Here we use the freeze-fracture replica method and a transmission electron microscope (TEM to observe UFBs in the nutrient solutions used in a crop-growing system known as a plant factory. In this factory, TEM images taken from various points in the supply line indicate that the concentration of UFBs in the nutrient solution is conserved, starting from their addition to the nutrient solution in the buffer tank, through the peat-moss layer, all the way to the rhizosphere. Measurements also show that a thin film formed on the surface of UFBs in the nutrient solution, with greater film thickness at the rhizosphere. This film is considered to be made from the accumulation of impurities coming from solute and the peat-moss layer.

Statistical mechanics of stochastic neural networks: Relationship between the self-consistent signal-to-noise analysis, Thouless-Anderson-Palmer equation, and replica symmetric calculation approaches

International Nuclear Information System (INIS)

Shiino, Masatoshi; Yamana, Michiko

2004-01-01

We study the statistical mechanical aspects of stochastic analog neural network models for associative memory with correlation type learning. We take three approaches to derive the set of the order parameter equations for investigating statistical properties of retrieval states: the self-consistent signal-to-noise analysis (SCSNA), the Thouless-Anderson-Palmer (TAP) equation, and the replica symmetric calculation. On the basis of the cavity method the SCSNA can be generalized to deal with stochastic networks. We establish the close connection between the TAP equation and the SCSNA to elucidate the relationship between the Onsager reaction term of the TAP equation and the output proportional term of the SCSNA that appear in the expressions for the local fields

Isolation of a spontaneous CHO amino acid transport mutant by a combination of tritium suicide and replica plating

International Nuclear Information System (INIS)

Dantzig, A.H.; Slayman, C.W.; Adelberg, E.A.

1982-01-01

A spontaneous transport mutant of Chinese hamster ovary cells, CHY-1, was isolated by a combination of [ 3 H]proline suicide and replica plating. The mutant took up less tritium than the parent, resulting in a lower killing rate during storage. Transport by four separate amino acid transport systems (A, ASC, L, Ly+) was examined. The CHY-1 mutant exhibited normal uptake via the ASC, L, and Ly+ systems. By contrast, uptake of the most specific substrate of the A system, 2-(methylamino)-isobutyric acid, was significantly reduced at low, but not high, concentrations, due to a 3.5-fold increase in Km and a 1.5-fold increase in Vmax. Taken together, these data suggest that the CHY-1 mutation may be in the structural gene coding for the A transport protein. The tritium suicide procedure is discussed, and general equations are derived to predict the maximum storage time for the survival of one mutant cell and the optimum size of the cell population for maximum mutant enrichment

Origin of two time-scale regimes in potentiometric titration of metal oxides. A replica kinetic Monte Carlo study

International Nuclear Information System (INIS)

Zarzycki, Piotr P.; Rosso, Kevin M.

2009-01-01

Replica Kinetic Monte Carlo simulations were used to study the characteristic time scales of potentiometric titration of the metal oxides and (oxy)hydroxides. The effect of surface heterogeneity and surface transformation on the titration kinetics were also examined. Two characteristic relaxation times are often observed experimentally, with the trailing slower part attributed to surface non-uniformity, porosity, polymerization, amorphization, and other dynamic surface processes induced by unbalanced surface charge. However, our simulations show that these two characteristic relaxation times are intrinsic to the proton binding reaction for energetically homogeneous surfaces, and therefore surface heterogeneity or transformation do not necessarily need to be invoked. However, all such second-order surface processes are found to intensify the separation and distinction of the two kinetic regimes. The effect of surface energetic-topographic non-uniformity, as well dynamic surface transformation, interface roughening/smoothing were described in a statistical fashion. Furthermore, our simulations show that a shift in the point-of-zero charge is expected from increased titration speed and the pH-dependence of the titration measurement error is in excellent agreement with experimental studies.

Origin of two time-scale regimes in potentiometric titration of metal oxides. A replica kinetic Monte Carlo study.

Science.gov (United States)

Zarzycki, Piotr; Rosso, Kevin M

2009-06-16

Replica kinetic Monte Carlo simulations were used to study the characteristic time scales of potentiometric titration of the metal oxides and (oxy)hydroxides. The effect of surface heterogeneity and surface transformation on the titration kinetics were also examined. Two characteristic relaxation times are often observed experimentally, with the trailing slower part attributed to surface nonuniformity, porosity, polymerization, amorphization, and other dynamic surface processes induced by unbalanced surface charge. However, our simulations show that these two characteristic relaxation times are intrinsic to the proton-binding reaction for energetically homogeneous surfaces, and therefore surface heterogeneity or transformation does not necessarily need to be invoked. However, all such second-order surface processes are found to intensify the separation and distinction of the two kinetic regimes. The effect of surface energetic-topographic nonuniformity, as well dynamic surface transformation, interface roughening/smoothing were described in a statistical fashion. Furthermore, our simulations show that a shift in the point-of-zero charge is expected from increased titration speed, and the pH-dependence of the titration measurement error is in excellent agreement with experimental studies.

Popularity framework to process dataset traces and its application on dynamic replica reduction in the ATLAS experiment

International Nuclear Information System (INIS)

Molfetas, Angelos; Megino, Fernando Barreiro; Tykhonov, Andrii; Lassnig, Mario; Garonne, Vincent; Barisits, Martin; Campana, Simone; Dimitrov, Gancho; Jezequel, Stephane; Ueda, Ikuo; Viegas, Florbela Tique Aires

2011-01-01

The ATLAS experiment's data management system is constantly tracing file movement operations that occur on the Worldwide LHC Computing Grid (WLCG). Due to the large scale of the WLCG, statistical analysis of the traces is infeasible in real-time. Factors that contribute to the scalability problems include the capability for users to initiate on-demand queries, high dimensionality of tracer entries combined with very low cardinality parameters, and the large size of the namespace. These scalability issues are alleviated through the adoption of an incremental model that aggregates data for all combinations occurring in selected tracer fields on a daily basis. Using this model it is possible to query on-demand relevant statistics about system usage. We present an implementation of this popularity model in the experiment's distributed data management system, DQ2, and describe a direct application example of the popularity framework, an automated cleaning system, which uses the statistics to dynamically detect and reduce unpopular replicas from grid sites. This paper describes the architecture employed by the cleaning system and reports on the results collected from a prototype during the first months of the ATLAS collision data taking.

Partial replicas of uv-irradiated bacteriophage T4 genomes and their role in multiplicity reactivation

International Nuclear Information System (INIS)

Rayssiguier, C.; Kozinski, A.W.; Doermann, A.H.

1980-01-01

A physicochemical study was made of the replication and transmission of uv-irradiated T4 genomes. The data presented in this paper justify the following conclusions. (i) For both low and high multiplicity of infection there was abundant replication from uv-irradiated parental templates. It exceeded by far the efficiency predicted by the hypothesis that a single lethal hit completely prevents replication of the killed phage DNA: i.e., some dead phage particles must replicate parts of their DNA. (ii) Replication of the uv-irradiated DNA was repetitive as shown by density reversal experiments. (iii) Newly synthesized progeny DNA originating from uv-irradiated templates appeared as significantly shorter segments of the genomes than progeny DNA produced from non-uv-irradiated templates. A good correlation existed between the number of uv hits and the number of random cuts that would be needed to reduce replication fragments to the length observed. (iv) The contribution of uv-irradiated parental DNA among progeny phage in multiplicity reactivation was disposed in shorter subunits than was the DNA from unirradiated parental phage. It is important to emphasize that it was mainly in the form of replicative hybrid. These conclusions appear to justify excluding interparental recombination as a prerequisite for multiplicity reactivation. They lead directly to some form of partial replica hypothesis for multiplicity reactivation

SEM/EDX and vis spectrophotometry study of the stability of resin-bound mortars used for casting replicas and filling missing parts of historic stone fountains.

Science.gov (United States)

Roig-Salom, José-Luis; Doménech-Carbó, María-Teresa; de la Cruz-Cañizares, Juana; Bolívar-Galiano, Fernando; Pelufo-Carbonell, María-José; Peraza-Zurita, Yaiza

2003-04-01

A study by SEM/EDX and spectrophotometry in the visible region attempting to assess the stability of new resin-bound mortars used for casting replicas of marble historic fountains is presented in this paper. Different accelerating tests such as thermal ageing, UV light ageing, ageing in an SO(2) pollutant chamber, freezing cycles ageing, salt crystallisation ageing, natural ageing and biological attack have been applied to a series of test specimens prepared with polyester-, epoxy- and gel-coat-bound mortars. Examination of morphology, measurement of chemical composition and chromatic coordinates before and after ageing treatments establish the higher stability and resistance properties of these resin-bound mortars by comparison to those from the natural marbles.

FTIR study of ageing of fast drying oil colour (FDOC) alkyd paint replicas

Science.gov (United States)

Duce, Celia; Della Porta, Valentina; Tiné, Maria Rosaria; Spepi, Alessio; Ghezzi, Lisa; Colombini, Maria Perla; Bramanti, Emilia

2014-09-01

We propose ATR-FTIR spectroscopy for the characterization of the spectral changes in alkyd resin from the Griffin Alkyd Fast Drying Oil Colour range (Winsor & Newton), occurring over 550 days (˜18 months) of natural ageing and over six months of artificial ageing under an acetic acid atmosphere. Acetic acid is one of the atmospheric pollutants found inside museums in concentrations that can have a significant effect on the works exhibited. During natural ageing we observed an increase and broadening of the OH group band around 3300 cm-1 and an increase in bands in the region 1730-1680 cm-1 due to carbonyl stretching. We found a broad band around 1635 cm-1 likely due to Cdbnd O stretching vibrations of β dichetons. These spectral changes are the result of autooxidation reactions during natural ageing and crosslinking, which then form f alcohols and carbonyl species. The increase in absorbance at 1635 cm-1 was selected as a parameter to monitor the ageing process of paintings prepared with FDOC, without the need for any extractive procedure. FTIR spectra of paint replicas kept under an acetic acid atmosphere indicated the chemical groups involved in the reaction with acid, thus suggesting which spectral FTIR regions could be investigated in order to follow any degradation in real paintings. A red paint sample from a hyper-realistic artwork (“Racconta storie”, 2003) by the Italian painter Patrizia Zara was investigated by FTIR in order to evaluate the effects of 10 years natural ageing on alkyd colours. The results obtained suggested that after the end of chemical drying (autooxidation), alkyd colours are very stable.

A brief account of Kozloduy 6 full-scope replica control room simulator upgrade experience: An engineering point of view

International Nuclear Information System (INIS)

Dinkov, Y.D.

2006-01-01

A short excursion throughout Kozloduy NPP history, and Kozloduy 6 Full-Scope Replica Control Room Simulator procurement, is proposed for a reader, which is not familiar with the Kozloduy circumstances. A brief account of five year operation and upgrade experience is presented as seen by the Kozloduy simulator engineering team. During the last five years Kozloduy 6 is going through a complex and expensive modernization programme so Simulator is a subject of a series of changes twice per year. Simulator is used for training six months of the year during spring and autumn most of this time in two shifts daily. Remaining six months during winter and summer are allocated to other simulator uses including five months downtime for hardware reconstruction, software integration, troubleshooting and testing. Quantitative information concerning scope of software and hardware changes is given. Kozloduy NPP simulator engineering team approach toward various upgrade projects is given in an attempt to facilitate a discussion about how a simulator upgrade should be performed. Projects mentioned vary from small to big, in-house or contracted, already completed or planned for future realization

Material versatility using replica molding for large-scale fabrication of high aspect-ratio, high density arrays of nano-pillars

International Nuclear Information System (INIS)

Li, Y; Menon, C; Ng, H W; Gates, B D

2014-01-01

Arrays of high aspect-ratio (AR) nano-pillars have attracted a lot of interest for various applications, such as for use in solar cells, surface acoustic sensors, tissue engineering, bio-inspired adhesives and anti-reflective surfaces. Each application may require a different structural material, which can vary in the required chemical composition and mechanical properties. In this paper, a low cost fabrication procedure is proposed for large scale, high AR and high density arrays of nano-pillars. The proposed method enables the replication of a master with high fidelity, using the subsequent replica molds multiple times, and preparing arrays of nano-pillars in a variety of different materials. As an example applied to bio-inspired dry adhesion, polymeric arrays of nano-pillars are prepared in this work. Thermoset and thermoplastic nano-pillar arrays are examined using an atomic force microscope to assess their adhesion strength and its uniformity. Results indicate the proposed method is robust and can be used to reliably prepare nano-structures with a high AR. (paper)

Hydrogen storage enhanced in Li-doped carbon replica of zeolites: a possible route to achieve fuel cell demand.

Science.gov (United States)

Roussel, Thomas; Bichara, Christophe; Gubbins, Keith E; Pellenq, Roland J-M

2009-05-07

We first report the atomistic grand canonical Monte Carlo simulations of the synthesis of two realistic ordered microporous carbon replica in two siliceous forms of faujasite zeolite (cubic Y-FAU and hexagonal EMT). Atomistic simulations of hydrogen adsorption isotherms in these two carbon structures and their Li-doped composites were carried out to determine their storage capacities at 77 and 298 K. We found that these new forms of carbon solids and their Li-doped versions show very attractive hydrogen storage capacities at 77 and 298 K, respectively. However, for a filling pressure of 300 bars and at room temperature, bare carbons do not show advantageous performances compared to a classical gas cylinder despite of their crystalline micropore network. In comparison, Li-doped nanostructures provide reversible gravimetric and volumetric hydrogen storage capacities twice larger (3.75 wt % and 33.7 kg/m(3)). The extreme lattice stiffness of their skeleton will prevent them from collapsing under large external applied pressure, an interesting skill compared to bundle of carbon nanotubes, and metal organic frameworks (MOFs). These new ordered composites are thus very promising materials for hydrogen storage issues by contrast with MOFs.

Plasticity of 150-loop in influenza neuraminidase explored by Hamiltonian replica exchange molecular dynamics simulations.

Directory of Open Access Journals (Sweden)

Nanyu Han

Full Text Available Neuraminidase (NA of influenza is a key target for antiviral inhibitors, and the 150-cavity in group-1 NA provides new insight in treating this disease. However, NA of 2009 pandemic influenza (09N1 was found lacking this cavity in a crystal structure. To address the issue of flexibility of the 150-loop, Hamiltonian replica exchange molecular dynamics simulations were performed on different groups of NAs. Free energy landscape calculated based on the volume of 150-cavity indicates that 09N1 prefers open forms of 150-loop. The turn A (residues 147-150 of the 150-loop is discovered as the most dynamical motif which induces the inter-conversion of this loop among different conformations. In the turn A, the backbone dynamic of residue 149 is highly related with the shape of 150-loop, thus can function as a marker for the conformation of 150-loop. As a contrast, the closed conformation of 150-loop is more energetically favorable in N2, one of group-2 NAs. The D147-H150 salt bridge is found having no correlation with the conformation of 150-loop. Instead the intimate salt bridge interaction between the 150 and 430 loops in N2 variant contributes the stabilizing factor for the closed form of 150-loop. The clustering analysis elaborates the structural plasticity of the loop. This enhanced sampling simulation provides more information in further structural-based drug discovery on influenza virus.

Metallic microwires obtained as replicas of etched ion tracks in polymer matrixes: Microscopy and emission properties

International Nuclear Information System (INIS)

Zagorski, D.L.; Bedin, S.A.; Oleinikov, V.A.; Polyakov, N.B.; Rybalko, O.G.; Mchedlishvili, B.V.

2009-01-01

Specially prepared porous matrixes (with through and dead-end pores of cylindrical or conical forms) were used as the templates for making ensembles of microwires. The process of electrodeposition of metal (Cu) into these pores was investigated. AFM technique was used for studying the 'composite material' (metal microwires embedded into the polymer matrix). It was shown that the combination of different modes of AFM (tapping with phase-contrast mode, contact with lateral force mode) makes it possible to detect metal in the polymer matrix. Additional spread resistance mode in the contact regime allowed to measure the electrical conductivity of a single wire. The ensembles of free-standing microwires (metallic replicas of the pores obtained after removing of the polymer matrix) were used as the substrates (for deposition of the probe) for ion emission in the mass-spectrometer. It was shown that the intensity of formed ion beam increases with increasing of power of the laser pulse and with increasing of the mass of the probe. The intensity of mass-spectra signal on the power of laser pulse has a threshold character with saturation accompanied with the appearance of dimer ions. At the same time this intensity decreases with the increasing of the surface density of wires. The effect of degradation of wires during the laser pulse irradiation was found.

Computer simulation study of in-zeolites templated carbon replicas: structural and adsorption properties for hydrogen storage application; simulation numerique de repliques de zeolithes en carbone: structures et proprietes d'adsorption en vue d'une application au stockage d'hydrogene

Energy Technology Data Exchange (ETDEWEB)

Roussel, T

2007-05-15

Hydrogen storage is the key issue to envisage this gas for instance as an energy vector in the field of transportation. Porous carbons are materials that are considered as possible candidates. We have studied well-controlled microporous carbon nano-structures, carbonaceous replicas of meso-porous ordered silica materials and zeolites. We realized numerically (using Grand Canonical Monte Carlo Simulations, GCMC) the atomic nano-structures of the carbon replication of four zeolites: AlPO{sub 4}-5, silicalite-1, and Faujasite (FAU and EMT). The faujasite replicas allow nano-casting of a new form of carbon crystalline solid made of tetrahedrally or hexagonally interconnected single wall nano-tubes. The pore size networks are nano-metric giving these materials optimized hydrogen molecular storage capacities (for pure carbon phases). However, we demonstrate that these new carbon forms are not interesting for room temperature efficient storage compared to the void space of a classical gas cylinder. We showed that doping with an alkaline element, such as lithium, one could store the same quantities at 350 bar compared to a classical tank at 700 bar. This result is a possible route to achieve interesting performances for on-board docking systems for instance. (author)

Computer simulation study of in-zeolites templated carbon replicas: structural and adsorption properties for hydrogen storage application; simulation numerique de repliques de zeolithes en carbone: structures et proprietes d'adsorption en vue d'une application au stockage d'hydrogene

Energy Technology Data Exchange (ETDEWEB)

Roussel, T

2007-05-15

Hydrogen storage is the key issue to envisage this gas for instance as an energy vector in the field of transportation. Porous carbons are materials that are considered as possible candidates. We have studied well-controlled microporous carbon nano-structures, carbonaceous replicas of meso-porous ordered silica materials and zeolites. We realized numerically (using Grand Canonical Monte Carlo Simulations, GCMC) the atomic nano-structures of the carbon replication of four zeolites: AlPO{sub 4}-5, silicalite-1, and Faujasite (FAU and EMT). The faujasite replicas allow nano-casting of a new form of carbon crystalline solid made of tetrahedrally or hexagonally interconnected single wall nano-tubes. The pore size networks are nano-metric giving these materials optimized hydrogen molecular storage capacities (for pure carbon phases). However, we demonstrate that these new carbon forms are not interesting for room temperature efficient storage compared to the void space of a classical gas cylinder. We showed that doping with an alkaline element, such as lithium, one could store the same quantities at 350 bar compared to a classical tank at 700 bar. This result is a possible route to achieve interesting performances for on-board docking systems for instance. (author)

Jendl-3.1 iron validation on the PCA-REPLICA (H2O/Fe) shielding benchmark experiment

International Nuclear Information System (INIS)

Pescarini, M.; Borgia, M. G.

1997-03-01

The PCA-REPLICA (H 2 O/Fe) neutron shielding benchmarks experiment is analysed using the SN 2-D DOT 3.5-E code and the 3-D-equivalent flux synthesis method. This engineering benchmark reproduces the ex-core radial geometry of a PWR, including a mild steel reactor pressure vessel (RPV) simulator, and is designed to test the accuracy of the calculation of the in-vessel neutron exposure parameters. This accuracy is strongly dependent on the quality of the iron neutron cross sections used to describe the nuclear reactions within the RPV simulator. In particular, in this report, the cross sections based on the JENDL-3.1 iron data files are tested, through a comparison of the calculated integral and spectral results with the corresponding experimental data. In addition, the present results are compared, on the same benchmark experiment, with those of a preceding ENEA-Bologna validation of the ENDF/B VI iron cross sections. The integral result comparison indicates that, for all the threshold detectors considered (Rh-103 (n, n') Rh-103m, In-115 (n, n') In-115m and S-32 (n, p) P-32), the JENDL-3.1 natural iron data produce satisfactory results similar to those obtained with the ENDF/B VI iron data. On the contrary, when the JENDL/3.1 Fe-56 data file is used, strongly underestimated results are obtained for the lower energy threshold detectors, Rh-103 and In-115. This fact, in particular, becomes more evident with increasing the neutron penetration depth in the RPV simulator

A Study of Hydraulic Properties in a Single Fracture with In-plane Heterogeneity: An Evaluation Using Optical Measurements of a Transparent Replica

Energy Technology Data Exchange (ETDEWEB)

Sawada, Atsushi; Ssto, Hisashi [Japan Atomic Energy Agency, Ibaraki (Japan)

2010-02-15

Experimental examinations for evaluating fractures were conducted by using transparent replicas of a single fracture in order to obtain the fracture data to contribute to the methodology on how to improve the definition of representative parameter values used for a parallel plate fracture model. Quantitative aperture distribution and quantitative tracer concentration data at each point in time were obtained by measuring the attenuation of transmitted light through the fracture in high spatial resolution. The representative aperture values evaluated from the multiple different measurement methods, such as arithmetic mean of aperture distribution measured by the optical method, transport aperture evaluated from the tracer test, and average aperture evaluated from the fracture void volume measurement converged to a unique value that indicates the accuracy of this experimental study. The aperture data was employed for verifying the numerical simulation under the assumption of Local Cubic Law and showed that the calculated flow rate through the fracture is 10% . 100% larger than hydraulic test results. The quantitative tracer concentration data is also very valuable for validating existing numerical code for advection dispersion transport in-plane heterogeneous fractures

A Study of Hydraulic Properties in a Single Fracture with In-plane Heterogeneity: An Evaluation Using Optical Measurements of a Transparent Replica

International Nuclear Information System (INIS)

Sawada, Atsushi; Ssto, Hisashi

2010-01-01

Experimental examinations for evaluating fractures were conducted by using transparent replicas of a single fracture in order to obtain the fracture data to contribute to the methodology on how to improve the definition of representative parameter values used for a parallel plate fracture model. Quantitative aperture distribution and quantitative tracer concentration data at each point in time were obtained by measuring the attenuation of transmitted light through the fracture in high spatial resolution. The representative aperture values evaluated from the multiple different measurement methods, such as arithmetic mean of aperture distribution measured by the optical method, transport aperture evaluated from the tracer test, and average aperture evaluated from the fracture void volume measurement converged to a unique value that indicates the accuracy of this experimental study. The aperture data was employed for verifying the numerical simulation under the assumption of Local Cubic Law and showed that the calculated flow rate through the fracture is 10% . 100% larger than hydraulic test results. The quantitative tracer concentration data is also very valuable for validating existing numerical code for advection dispersion transport in-plane heterogeneous fractures

Análise da cinética de replicação do parvovírus canino em cultivo de células CRFK através da PCR em tempo real

OpenAIRE

Alexandra Rosa da Silva

2011-01-01

No presente estudo, foi inicialmente padronizada uma PCR para detecção do DNA viral da semente de Parvovírus Canino utilizado na vacina brasileira Imunovet® (VR-953TM), tendo como alvo o gene VP2. O produto de PCR foi submetido ao seqüenciamento a fim de caracterizar geneticamente a semente vacinal. A seguir, foi padronizada uma reação de PCR em tempo real (RT-PCR) para detecção de um fragmento de 119 pb do gene VP2, a qual foi empregada para avaliar a cinética de replicação da amostra vacina...

Involvement of microbial mats in early fossilization by decay delay and formation of impressions and replicas of vertebrates and invertebrates

Science.gov (United States)

Iniesto, Miguel; Buscalioni, Ángela D.; Carmen Guerrero, M.; Benzerara, Karim; Moreira, David; López-Archilla, Ana I.

2016-05-01

Microbial mats have been hypothesized to improve the persistence and the preservation of organic remains during fossilization processes. We test this hypothesis with long-term experiments (up to 5.5 years) using invertebrate and vertebrate corpses. Once placed on mats, the microbial community coats the corpses and forms a three-dimensional sarcophagus composed of microbial cells and exopolymeric substances (EPS). This coverage provides a template for i) moulding superficial features, resulting in negative impressions, and ii) generating replicas. The impressions of fly setulae, fish scales and frog skin verrucae are shaped mainly by small cells in an EPS matrix. Microbes also replicate delicate structures such as the three successive layers that compose a fish eye. The sarcophagus protects the body integrity, allowing the persistence of inner organs such as the ovaries and digestive apparatus in flies, the swim bladder and muscles in fish, and the bone marrow in frog legs. This study brings strong experimental evidence to the idea that mats favour metazoan fossilization by moulding, replicating and delaying decay. Rapid burial has classically been invoked as a mechanism to explain exceptional preservation. However, mats may play a similar role during early fossilization as they can preserve complex features for a long time.

ENDF/B VI iron validation onpca-replica (H2O/FE) shielding benchmark experiment

Energy Technology Data Exchange (ETDEWEB)

Pescarini, M. [ENEA, Bologna (Italy). Centro Ricerche Energia `E. Clementel` - Area Energia e Innovazione

1994-05-01

The PCA-REPLICA (H2O/Fe) neutron shielding benchmark experiment is analysed using the SN 2-D DOT 3.5 code and the 3-D-equivalent flux synthesis method. This engineering benchmark reproduces the ex-core radial geometry of a PWR, including a mild steel reactor pressure vessel (RPV) simulator, and is dsigned to test the accuracy of the calculation of the in-vessel neutron exposure parameters (fast fluence and iron displacement rates). This accuracy is strongly dependent on the quality of the iron neutron cross section used to describe the nuclear reactions within the RPV simulator. In particular, in this report, the cross sections based on the ENDF/B VI iron data files are tested, through a comparison of the calculated integral and spectral results with the corresponding experimental data. In addition, the present results are compared, on the same benchmark experiment, with those of a preceding ENEA (Italian Agency for Energy, New Technologies and Environment)-Bologna validation of the JEF-2.1 iron cross sections. The integral result comparison indicates that, for all the thresold detectors considered (Rh-103 (n,n) Rh-103m, In-115 (n,n) In-115 (n,n) In-115m and S-32 (n.p) P-32), the ENDF/B VI iron data produce better results than the JEF-2.1 iron data. In particular, in the ENDF/B VI calcultaions, an improvement of the in-vessel C/E (Calculated/Experimental) activity ratios for the lower energy threshold detectors, Rh-103 and In-115, is observed. This improvement becomes more evident with increasing neutron penetration depth in the vessel. This is probably attributable to the fact that the inelastic scattering cross section values of the ENDF/B VI Fe-56 data file, approximately in the 0.86 - 1.5 MeV energy range, are lower then the corresponding values of the JEF-2.1 data file.

Jendl-3.1 iron validation on the PCA-REPLICA (H{sub 2}O/Fe) shielding benchmark experiment

Energy Technology Data Exchange (ETDEWEB)

Pescarini, M.; Borgia, M. G. [ENEA, Centro Ricerche ``Ezio Clementel``, Bologna (Italy). Dipt. Energia

1997-03-01

The PCA-REPLICA (H{sub 2}O/Fe) neutron shielding benchmarks experiment is analysed using the SN 2-D DOT 3.5-E code and the 3-D-equivalent flux synthesis method. This engineering benchmark reproduces the ex-core radial geometry of a PWR, including a mild steel reactor pressure vessel (RPV) simulator, and is designed to test the accuracy of the calculation of the in-vessel neutron exposure parameters. This accuracy is strongly dependent on the quality of the iron neutron cross sections used to describe the nuclear reactions within the RPV simulator. In particular, in this report, the cross sections based on the JENDL-3.1 iron data files are tested, through a comparison of the calculated integral and spectral results with the corresponding experimental data. In addition, the present results are compared, on the same benchmark experiment, with those of a preceding ENEA-Bologna validation of the ENDF/B VI iron cross sections. The integral result comparison indicates that, for all the threshold detectors considered (Rh-103 (n, n`) Rh-103m, In-115 (n, n`) In-115m and S-32 (n, p) P-32), the JENDL-3.1 natural iron data produce satisfactory results similar to those obtained with the ENDF/B VI iron data. On the contrary, when the JENDL/3.1 Fe-56 data file is used, strongly underestimated results are obtained for the lower energy threshold detectors, Rh-103 and In-115. This fact, in particular, becomes more evident with increasing the neutron penetration depth in the RPV simulator.

A deconvolution method for deriving the transit time spectrum for ultrasound propagation through cancellous bone replica models.

Science.gov (United States)

Langton, Christian M; Wille, Marie-Luise; Flegg, Mark B

2014-04-01

The acceptance of broadband ultrasound attenuation for the assessment of osteoporosis suffers from a limited understanding of ultrasound wave propagation through cancellous bone. It has recently been proposed that the ultrasound wave propagation can be described by a concept of parallel sonic rays. This concept approximates the detected transmission signal to be the superposition of all sonic rays that travel directly from transmitting to receiving transducer. The transit time of each ray is defined by the proportion of bone and marrow propagated. An ultrasound transit time spectrum describes the proportion of sonic rays having a particular transit time, effectively describing lateral inhomogeneity of transit times over the surface of the receiving ultrasound transducer. The aim of this study was to provide a proof of concept that a transit time spectrum may be derived from digital deconvolution of input and output ultrasound signals. We have applied the active-set method deconvolution algorithm to determine the ultrasound transit time spectra in the three orthogonal directions of four cancellous bone replica samples and have compared experimental data with the prediction from the computer simulation. The agreement between experimental and predicted ultrasound transit time spectrum analyses derived from Bland-Altman analysis ranged from 92% to 99%, thereby supporting the concept of parallel sonic rays for ultrasound propagation in cancellous bone. In addition to further validation of the parallel sonic ray concept, this technique offers the opportunity to consider quantitative characterisation of the material and structural properties of cancellous bone, not previously available utilising ultrasound.

Efficient parallel implementations of QM/MM-REMD (quantum mechanical/molecular mechanics-replica-exchange MD) and umbrella sampling: isomerization of H2O2 in aqueous solution.

Science.gov (United States)

Fedorov, Dmitri G; Sugita, Yuji; Choi, Cheol Ho

2013-07-03

An efficient parallel implementation of QM/MM-based replica-exchange molecular dynamics (REMD) as well as umbrella samplings techniques was proposed by adopting the generalized distributed data interface (GDDI). Parallelization speed-up of 40.5 on 48 cores was achieved, making our QM/MM-MD engine a robust tool for studying complex chemical dynamics in solution. They were comparatively used to study the torsional isomerization of hydrogen peroxide in aqueous solution. All results by QM/MM-REMD and QM/MM umbrella sampling techniques yielded nearly identical potentials of mean force (PMFs) regardless of the particular QM theories for solute, showing that the overall dynamics are mainly determined by solvation. Although the entropic penalty of solvent rearrangements exists in cisoid conformers, it was found that both strong intermolecular hydrogen bonding and dipole-dipole interactions preferentially stabilize them in solution, reducing the torsional free-energy barrier at 0° by about 3 kcal/mol as compared to that in gas phase.

Using a replica of Leeuwenhoek's microscope to teach the history of science and to motivate students to discover the vision and the contributions of the first microscopists.

Science.gov (United States)

Sepel, Lenira M N; Loreto, Elgion L S; Rocha, João B T

2009-01-01

The history of science should be incorporated into science teaching as a means of improving learning and also to increase the students' understanding about the nature of science. In biology education, the history of microscopy deserves a special place. The discovery of this instrument not only opened a new and fantastic microworld but also led to the development of one unifying principle of biological sciences (i.e., cell theory). The microscopes of Leeuwenhoek and Hooke opened windows into the microworld of living organisms. In the present work, the knowledge of these themes was analyzed in a group of students beginning an undergraduate biology course. Our data suggest that the history of microscopy is poorly treated at the secondary school level. We propose a didactic activity using a replica of Leeuwenhoek's microscope made with Plexiglas and a lens obtained from a key chain laser pointer or from a broken CD drive. The proposed activity motivated students to learn about microscopy and helped them to appreciate scientific knowledge from a historical perspective.

A replica exchange Monte Carlo algorithm for protein folding in the HP model

Directory of Open Access Journals (Sweden)

Shmygelska Alena

2007-09-01

Full Text Available Abstract Background The ab initio protein folding problem consists of predicting protein tertiary structure from a given amino acid sequence by minimizing an energy function; it is one of the most important and challenging problems in biochemistry, molecular biology and biophysics. The ab initio protein folding problem is computationally challenging and has been shown to be NP MathType@MTEF@5@5@+=feaafiart1ev1aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacH8akY=wiFfYdH8Gipec8Eeeu0xXdbba9frFj0=OqFfea0dXdd9vqai=hGuQ8kuc9pgc9s8qqaq=dirpe0xb9q8qiLsFr0=vr0=vr0dc8meaabaqaciaacaGaaeqabaqabeGadaaakeaat0uy0HwzTfgDPnwy1egaryqtHrhAL1wy0L2yHvdaiqaacqWFneVtcqqGqbauaaa@3961@-hard even when conformations are restricted to a lattice. In this work, we implement and evaluate the replica exchange Monte Carlo (REMC method, which has already been applied very successfully to more complex protein models and other optimization problems with complex energy landscapes, in combination with the highly effective pull move neighbourhood in two widely studied Hydrophobic Polar (HP lattice models. Results We demonstrate that REMC is highly effective for solving instances of the square (2D and cubic (3D HP protein folding problem. When using the pull move neighbourhood, REMC outperforms current state-of-the-art algorithms for most benchmark instances. Additionally, we show that this new algorithm provides a larger ensemble of ground-state structures than the existing state-of-the-art methods. Furthermore, it scales well with sequence length, and it finds significantly better conformations on long biological sequences and sequences with a provably unique ground-state structure, which is believed to be a characteristic of real proteins. We also present evidence that our REMC algorithm can fold sequences which exhibit significant interaction between termini in the hydrophobic core relatively easily. Conclusion We demonstrate that REMC utilizing the pull move

Database Replication

CERN Document Server

Kemme, Bettina

2010-01-01

Database replication is widely used for fault-tolerance, scalability and performance. The failure of one database replica does not stop the system from working as available replicas can take over the tasks of the failed replica. Scalability can be achieved by distributing the load across all replicas, and adding new replicas should the load increase. Finally, database replication can provide fast local access, even if clients are geographically distributed clients, if data copies are located close to clients. Despite its advantages, replication is not a straightforward technique to apply, and

Assemblies of amyloid-β30-36 hexamer and its G33V/L34T mutants by replica-exchange molecular dynamics simulation.

Directory of Open Access Journals (Sweden)

Zhenyu Qian

Full Text Available The aggregation of amyloid-β peptides is associated with the pathogenesis of Alzheimer's disease, in which the 30-36 fragments play an important part as a fiber-forming hydrophobic region. The fibrillar structure of Aβ30-36 has been detected by means of X-ray diffraction, but its oligomeric structural determination, biophysical characterization, and pathological mechanism remain elusive. In this study, we have investigated the structures of Aβ30-36 hexamer as well as its G33V and L34T mutants in explicit water environment using replica-exchange molecular dynamics (REMD simulations. Our results show that the wild-type (WT Aβ30-36 hexamer has a preference to form β-barrel and bilayer β-sheet conformations, while the G33V or L34T mutation disrupts the β-barrel structures: the G33V mutant is homogenized to adopt β-sheet-rich bilayers, and the structures of L34T mutant on the contrary get more diverse. The hydrophobic interaction plays a critical role in the formation and stability of oligomeric assemblies among all the three systems. In addition, the substitution of G33 by V reduces the β-sheet content in the most populated conformations of Aβ30-36 oligomers through a steric effect. The L34T mutation disturbs the interpeptide hydrogen bonding network, and results in the increased coil content and morphological diversity. Our REMD runs provide structural details of WT and G33V/L34T mutant Aβ30-36 oligomers, and molecular insight into the aggregation mechanism, which will be helpful for designing novel inhibitors or amyloid-based materials.

Magnetic Nickel iron Electroformed Trap (MagNET): a master/replica fabrication strategy for ultra-high throughput (>100 mL h−1) immunomagnetic sorting†

Science.gov (United States)

Ko, Jina; Yelleswarapu, Venkata; Singh, Anup; Shah, Nishal

2016-01-01

Microfluidic devices can sort immunomagnetically labeled cells with sensitivity and specificity much greater than that of conventional methods, primarily because the size of microfluidic channels and micro-scale magnets can be matched to that of individual cells. However, these small feature sizes come at the expense of limited throughput (ϕ 10 mL whole blood. Here, we report a new approach to micromagnetic sorting that can achieve highly specific cell separation in unprocessed complex samples at a throughput (ϕ > 100 mL h−1) 100× greater than that of conventional microfluidics. To achieve this goal, we have devised a new approach to micromagnetic sorting, the magnetic nickel iron electroformed trap (MagNET), which enables high flow rates by having millions of micromagnetic traps operate in parallel. Our design rotates the conventional microfluidic approach by 90° to form magnetic traps at the edges of pores instead of in channels, enabling millions of the magnetic traps to be incorporated into a centimeter sized device. Unlike previous work, where magnetic structures were defined using conventional microfabrication, we take inspiration from soft lithography and create a master from which many replica electroformed magnetic micropore devices can be economically manufactured. These free-standing 12 µm thick permalloy (Ni80Fe20) films contain micropores of arbitrary shape and position, allowing the device to be tailored for maximal capture efficiency and throughput. We demonstrate MagNET's capabilities by fabricating devices with both circular and rectangular pores and use these devices to rapidly (ϕ = 180 mL h−1) and specifically sort rare tumor cells from white blood cells. PMID:27170379

Topological phase transition in the two-dimensional anisotropic Heisenberg model: A study using the Replica Exchange Wang-Landau sampling

Science.gov (United States)

Figueiredo, T. P.; Rocha, J. C. S.; Costa, B. V.

2017-12-01

Although the topological Berezinskii-Kosterlitz-Thouless transition was for the first time described by 40 years ago, it is still a matter of discussion. It has been used to explain several experiments in the most diverse physical systems. In contrast with the ordinary continuous phase transitions the BKT-transition does not break any symmetry. However, in some contexts it can easily be confused with other continuous transitions, in general due to an insufficient data analysis. The two-dimensional XY (or sometimes called planar rotator) spin model is the fruit fly model describing the BKT transition. As demonstrated by Bramwell and Holdsworth (1993) the finite-size effects are more important in two-dimensions than in others due to the logarithmic system size dependence of the properties of the system. Closely related is the anisotropic two dimensional Heisenberg model (AH). Although they have the same Hamiltonian the spin variable in the former has only two degrees of freedom while the AH has three. Many works treat the AH model as undergoing a transition in the same universality class as the XY model. However, its characterization as being in the BKT class of universality deserve some investigation. This paper has two goals. First, we describe an analytical evidence showing that the AH model is in the BKT class of universality. Second, we make an extensive simulation, using the numerical Replica Exchange Wang-Landau method that corroborate our analytical calculations. From our simulation we obtain the BKT transition temperature as TBKT = 0 . 6980(10) by monitoring the susceptibility, the two point correlation function and the helicity modulus. We discuss the misuse of the fourth order Binder's cumulant to locate the transition temperature. The specific heat is shown to have a non-critical behavior as expected in the BKT transition. An analysis of the two point correlation function at low temperature, C(r) ∝r - η(T), shows that the exponent, η, is consistent

Development of SAAP3D force field and the application to replica-exchange Monte Carlo simulation for chignolin and C-peptide.

Science.gov (United States)

Iwaoka, Michio; Suzuki, Toshiki; Shoji, Yuya; Dedachi, Kenichi; Shimosato, Taku; Minezaki, Toshiya; Hojo, Hironobu; Onuki, Hiroyuki; Hirota, Hiroshi

2017-12-01

Single amino acid potential (SAAP) would be a prominent factor to determine peptide conformations. To prove this hypothesis, we previously developed SAAP force field for molecular simulation of polypeptides. In this study, the force field was renovated to SAAP3D force field by applying more accurate three-dimensional main-chain parameters, instead of the original two-dimensional ones, for the amino acids having a long side-chain. To demonstrate effectiveness of the SAAP3D force field, replica-exchange Monte Carlo (REMC) simulation was performed for two benchmark short peptides, chignolin (H-GYDPETGTWG-OH) and C-peptide (CHO-AETAAAKFLRAHA-NH 2 ). For chignolin, REMC/SAAP3D simulation correctly produced native β-turn structures, whose minimal all-atom root-mean-square deviation value measured from the native NMR structure (except for H) was 1.2 Å, at 300 K in implicit water, along with misfolded β-hairpin structures with unpacked aromatic side chains of Tyr2 and Trp9. Similar results were obtained for chignolin analog [G1Y,G10Y], which folded more tightly to the native β-turn structure than chignolin did. For C-peptide, on the other hand, the α-helix content was larger than the β content on average, suggesting a significant helix-forming propensity. When the imidazole side chain of His12 was protonated (i.e., [His12Hip]), the α content became larger. These observations as well as the representative structures obtained by clustering analysis were in reasonable agreement not only with the structures of C-peptide that were determined in this study by NMR in 30% CD 3 CD in H 2 O at 298 K but also with the experimental and theoretical behaviors having been reported for protonated C-peptide. Thus, accuracy of the SAAP force field was improved by applying three-dimensional main-chain parameters, supporting prominent importance of SAAP for peptide conformations.

Development of SAAP3D force field and the application to replica-exchange Monte Carlo simulation for chignolin and C-peptide

Science.gov (United States)

Iwaoka, Michio; Suzuki, Toshiki; Shoji, Yuya; Dedachi, Kenichi; Shimosato, Taku; Minezaki, Toshiya; Hojo, Hironobu; Onuki, Hiroyuki; Hirota, Hiroshi

2017-12-01

Single amino acid potential (SAAP) would be a prominent factor to determine peptide conformations. To prove this hypothesis, we previously developed SAAP force field for molecular simulation of polypeptides. In this study, the force field was renovated to SAAP3D force field by applying more accurate three-dimensional main-chain parameters, instead of the original two-dimensional ones, for the amino acids having a long side-chain. To demonstrate effectiveness of the SAAP3D force field, replica-exchange Monte Carlo (REMC) simulation was performed for two benchmark short peptides, chignolin (H-GYDPETGTWG-OH) and C-peptide (CHO-AETAAAKFLRAHA-NH2). For chignolin, REMC/SAAP3D simulation correctly produced native β-turn structures, whose minimal all-atom root-mean-square deviation value measured from the native NMR structure (except for H) was 1.2 Å, at 300 K in implicit water, along with misfolded β-hairpin structures with unpacked aromatic side chains of Tyr2 and Trp9. Similar results were obtained for chignolin analog [G1Y,G10Y], which folded more tightly to the native β-turn structure than chignolin did. For C-peptide, on the other hand, the α-helix content was larger than the β content on average, suggesting a significant helix-forming propensity. When the imidazole side chain of His12 was protonated (i.e., [His12Hip]), the α content became larger. These observations as well as the representative structures obtained by clustering analysis were in reasonable agreement not only with the structures of C-peptide that were determined in this study by NMR in 30% CD3CD in H2O at 298 K but also with the experimental and theoretical behaviors having been reported for protonated C-peptide. Thus, accuracy of the SAAP force field was improved by applying three-dimensional main-chain parameters, supporting prominent importance of SAAP for peptide conformations.

Approximate message passing for nonconvex sparse regularization with stability and asymptotic analysis

Science.gov (United States)

Sakata, Ayaka; Xu, Yingying

2018-03-01

We analyse a linear regression problem with nonconvex regularization called smoothly clipped absolute deviation (SCAD) under an overcomplete Gaussian basis for Gaussian random data. We propose an approximate message passing (AMP) algorithm considering nonconvex regularization, namely SCAD-AMP, and analytically show that the stability condition corresponds to the de Almeida-Thouless condition in spin glass literature. Through asymptotic analysis, we show the correspondence between the density evolution of SCAD-AMP and the replica symmetric (RS) solution. Numerical experiments confirm that for a sufficiently large system size, SCAD-AMP achieves the optimal performance predicted by the replica method. Through replica analysis, a phase transition between replica symmetric and replica symmetry breaking (RSB) region is found in the parameter space of SCAD. The appearance of the RS region for a nonconvex penalty is a significant advantage that indicates the region of smooth landscape of the optimization problem. Furthermore, we analytically show that the statistical representation performance of the SCAD penalty is better than that of \

An evaluation of some replication techniques for materials science applications of scanning electron microscopy

International Nuclear Information System (INIS)

Carpenter, G.J.C.; Baird, J.

1976-06-01

Several techniques for producing positive replicas for materials science applications have been critically examined: 1) Consistent high resolution replicas can be produced by vacuum evaporation of a gold film onto a 'Bioden' (cellulose acetate) negative replica, backing the film with electroplated copper and dissolving the 'Bioden'; 2) negative replicas that are easy to strip and handle may be made using a silicone rubber compound, 'Silastic' RTV 'A' but with highly variable resolution; 3) an epoxy resin, 'Ren', gave good resolution but could not easily be stripped from a specimen surface: it is therefore only suitable for the final (positive) stage of replication. Some possible techniques for obtaining more consistent resolution from 'Silastic' RTV synthetic rubbers are suggested. (author)

Digitization of simulated clinical dental impressions: virtual three-dimensional analysis of exactness.

Science.gov (United States)

Persson, Anna S K; Odén, Agneta; Andersson, Matts; Sandborgh-Englund, Gunilla

2009-07-01

To compare the exactness of simulated clinical impressions and stone replicas of crown preparations, using digitization and virtual three-dimensional analysis. Three master dies (mandibular incisor, canine and molar) were prepared for full crowns, mounted in full dental arches in a plane line articulator. Eight impressions were taken using an experimental monophase vinyl polysiloxane-based material. Stone replicas were poured in type IV stone (Vel-Mix Stone; Kerr). The master dies and the stone replicas were digitized in a touch-probe scanner (Procera) Forte; Nobel Biocare AB) and the impressions in a laser scanner (D250, 3Shape A/S), to create virtual models. The resulting point-clouds from the digitization of the master dies were used as CAD-Reference-Models (CRM). Discrepancies between the points in the pointclouds and the corresponding CRM were measured by a matching-software (CopyCAD 6.504 SP2; Delcam Plc). The distribution of the discrepancies was analyzed and depicted on color-difference maps. The discrepancies of the digitized impressions and the stone replicas compared to the CRM were of similar size with a mean+/-SD within 40microm, with the exception of two of the digitized molar impressions. The precision of the digitized impressions and stone replicas did not differ significantly (F=4.2; p=0.053). However, the shape affected the digitization (F=5.4; p=0.013) and the interaction effect of shape and digitization source (impression or stone replica) was pronounced (F=28; pimpressions varied with shape. Both impressions and stone replicas can be digitized repeatedly with a high reliability.

Dimer Metadynamics.

Science.gov (United States)

Nava, Marco; Palazzesi, Ferruccio; Perego, Claudio; Parrinello, Michele

2017-02-14

Sampling complex potential energies is one of the most pressing challenges of contemporary computational science. Inspired by recent efforts that use quantum effects and discretized Feynman's path integrals to overcome large barriers we propose a replica exchange method that we expect to be effective at least for systems of up to 150 atoms roughly. In each replica two copies of the same system with halved potential strengths interact via inelastic springs. The strength of the spring is varied in the different replicas so as to bridge the gap between the infinitely strong spring, that corresponds to the Boltzmann replica, and the less tight ones. We enhance the spring length fluctuations using Metadynamics. We test the method on simple yet challenging problems.

Multiprocessor Real-Time Locking Protocols for Replicated Resources

Science.gov (United States)

2016-07-01

assignment problem, the ac- tual identities of the allocated replicas must be known. When locking protocols are used, tasks may experience delays due to both...Multiprocessor Real-Time Locking Protocols for Replicated Resources ∗ Catherine E. Jarrett1, Kecheng Yang1, Ming Yang1, Pontus Ekberg2, and James H...replicas to execute. In prior work on replicated resources, k-exclusion locks have been used, but this restricts tasks to lock only one replica at a time. To

Fish and robot dancing together: bluefin killifish females respond differently to the courtship of a robot with varying color morphs.

Science.gov (United States)

Phamduy, P; Polverino, G; Fuller, R C; Porfiri, M

2014-09-01

The experimental integration of bioinspired robots in groups of social animals has become a valuable tool to understand the basis of social behavior and uncover the fundamental determinants of animal communication. In this study, we measured the preference of fertile female bluefin killifish (Lucania goodei) for robotic replicas whose aspect ratio, body size, motion pattern, and color morph were inspired by adult male killifish. The motion of the fish replica was controlled via a robotic platform, which simulated the typical courtship behavior observed in killifish males. The positional preferences of females were measured for three different color morphs (red, yellow, and blue). While variation in preference was high among females, females tend to spend more time in the vicinity of the yellow painted robot replicas. This preference may have emerged because the yellow robot replicas were very bright, particularly in the longer wavelengths (550–700 nm) compared to the red and blue replicas. These findings are in agreement with previous observations in mosquitofish and zebrafish on fish preference for artificially enhanced yellow pigmentation.

Fish and robot dancing together: bluefin killifish females respond differently to the courtship of a robot with varying color morphs

International Nuclear Information System (INIS)

Phamduy, P; Polverino, G; Porfiri, M; Fuller, R C

2014-01-01

The experimental integration of bioinspired robots in groups of social animals has become a valuable tool to understand the basis of social behavior and uncover the fundamental determinants of animal communication. In this study, we measured the preference of fertile female bluefin killifish (Lucania goodei) for robotic replicas whose aspect ratio, body size, motion pattern, and color morph were inspired by adult male killifish. The motion of the fish replica was controlled via a robotic platform, which simulated the typical courtship behavior observed in killifish males. The positional preferences of females were measured for three different color morphs (red, yellow, and blue). While variation in preference was high among females, females tend to spend more time in the vicinity of the yellow painted robot replicas. This preference may have emerged because the yellow robot replicas were very bright, particularly in the longer wavelengths (550–700 nm) compared to the red and blue replicas. These findings are in agreement with previous observations in mosquitofish and zebrafish on fish preference for artificially enhanced yellow pigmentation. (paper)

Accuracy of stereolithographic models of human anatomy

International Nuclear Information System (INIS)

Barker, T.M.; Earwaker, W.J.S.; Lisle, D.A.

1994-01-01

A study was undertaken to determine the dimensional accuracy of anatomical replicas derived from X-ray 3D computed tomography (CT) images and produced using the rapid prototyping technique of stereolithography (SLA). A dry bone skull and geometric phantom were scanned, and replicas were produced. Distance measurements were obtained to compare the original objects and the resulting replicas. Repeated measurements between anatomical landmarks were used for comparison of the original skull and replica. Results for the geometric phantom demonstrate a mean difference of +0.47mm, representing an accuracy of 97.7-99.12%. Measurements of the skull produced a range of absolute differences (maximum +4.62mm, minimum +0.1mm, mean +0.85mm). These results support the use of SLA models of human anatomical structures in such areas as pre-operative planning of complex surgical procedures. For applications where higher accuracy is required, improvements can be expected by utilizing smaller pixel resolution in the CT images. Stereolithographic models can now be confidently employed as accurate, three-dimensional replicas of complex, anatomical structures. 14 refs., 2 tabs., 8 figs

Evidence of iridescence in TiO2 nanostructures. A probably photonic effect

Science.gov (United States)

Rey-Gonzalez, Rafael; Quiroz, Heiddy P.; Barrera-Patiño, Claudia; Dussan, Anderson; Grupo de Optica e Informacion Cuantica Collaboration; Grupo de Materiales Nanoestructutrados y sus Aplicaciones Collaboration

In this work, we present a study of optical properties of titanium dioxide nanotubes (TiO2). Nanotubes were obtained by electrochemical anodization method, using ethylene glycol solutions containing different amounts of water and fluoride. A complex structure is observed between nanotubes and Ti foils on surface when nanotubes are released from the sheet. These forms can be associated with replicas or marks in surface of the Ti foil. The optical response of replicas is studied by Uv-Vis spectrophotometry using white light and varying the angle of the incident light. Absorbance measurements reveal that these replicas exhibit a shift towards lower values of lambda when the angle of the incident light increases of 200 to 600. These changes may be associated with iridescent effects in this material. The concavity of the replicas in association with air could be generating photonic-like effects. Using a 2D model of replicas - air system, the photonic band structures are found through a plane wave approach. Correlations between photonic properties and iridescent effects are explored. Grupo de Optica e Informacion Cuantica.

Disordered λ φ4+ρ φ6 Landau-Ginzburg model

Science.gov (United States)

Diaz, R. Acosta; Svaiter, N. F.; Krein, G.; Zarro, C. A. D.

2018-03-01

We discuss a disordered λ φ4+ρ φ6 Landau-Ginzburg model defined in a d -dimensional space. First we adopt the standard procedure of averaging the disorder-dependent free energy of the model. The dominant contribution to this quantity is represented by a series of the replica partition functions of the system. Next, using the replica-symmetry ansatz in the saddle-point equations, we prove that the average free energy represents a system with multiple ground states with different order parameters. For low temperatures we show the presence of metastable equilibrium states for some replica fields for a range of values of the physical parameters. Finally, going beyond the mean-field approximation, the one-loop renormalization of this model is performed, in the leading-order replica partition function.

Source and replica calculations

International Nuclear Information System (INIS)

Whalen, P.P.

1994-01-01

The starting point of the Hiroshima-Nagasaki Dose Reevaluation Program is the energy and directional distributions of the prompt neutron and gamma-ray radiation emitted from the exploding bombs. A brief introduction to the neutron source calculations is presented. The development of our current understanding of the source problem is outlined. It is recommended that adjoint calculations be used to modify source spectra to resolve the neutron discrepancy problem

Replication of polypyrrole with photonic structures from butterfly wings as biosensor

International Nuclear Information System (INIS)

Tang Jie; Zhu Shenmin; Chen Zhixin; Feng Chuanliang; Shen Yanjun; Yao Fan; Zhang Di; Moon, Won-Jin; Song, Deok-Min

2012-01-01

Highlights: ► Polypyrrole (PPy) with photonic structures from butterfly wings was synthesized based on a two-step templating and in situ polymerization process. ► The hierarchical structures down to nanometer level were kept in the resultant PPy replicas. ► The PPy replicas exhibit brilliant color due to Bragg diffraction through its ordered periodic structures. ► The PPy replicas showed a much higher biological activity compared with common PPy powders as a biosensor. - Abstract: Polypyrrole (PPy) with photonic crystal structures were synthesized from Morpho butterfly wings using a two-step templating process. In the first step photonic crystal SiO 2 butterfly wings were synthesized from Morpho butterfly wings and in the second step the SiO 2 butterfly wings were used as templates for the replication of PPy butterfly wings using an in situ polymerization method. The SiO 2 templates were then removed from the PPy butterfly wings using a HF solution. The hierarchical structures down to the nanometer level, especially the photonic crystal structures, were retained in the final PPy replicas, as evidenced directly by field-emission scanning electron microscope (FE-SEM) and transmission electron microscopy (TEM). The optical properties of the resultant PPy replicas were investigated using reflectance spectroscopy and the PPy replicas exhibit brilliant color due to Bragg diffraction through its ordered periodic structures. The preliminary biosensing application was investigated and it was found that the PPy replicas showed a much higher biological activity compared with PPy powders through their response to dopamine (DA), probably due to the hierarchical structures as well as controlled porosity inherited from Morpho butterfly wings. It is expected that our strategy will open up new avenues for the synthesis of functional polymers with photonic crystal structures, which may form applications as biosensors.

Replication of polypyrrole with photonic structures from butterfly wings as biosensor

Energy Technology Data Exchange (ETDEWEB)

Tang Jie [State Key Laboratory of Metal Matrix Composites, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai 200240 (China); Zhu Shenmin, E-mail: smzhu@sjtu.edu.cn [State Key Laboratory of Metal Matrix Composites, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai 200240 (China); Chen Zhixin [Faculty of Engineering, University of Wollongong, Wollongong, NSW 2522 (Australia); Feng Chuanliang; Shen Yanjun; Yao Fan [State Key Laboratory of Metal Matrix Composites, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai 200240 (China); Zhang Di, E-mail: zhangdi@sjtu.edu.cn [State Key Laboratory of Metal Matrix Composites, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai 200240 (China); Moon, Won-Jin; Song, Deok-Min [Gwangju Center, Korea Basic Science Institute, Yongbong-dong, Buk-Gu, Gwang ju 500-757 (Korea, Republic of)

2012-01-05

Highlights: Black-Right-Pointing-Pointer Polypyrrole (PPy) with photonic structures from butterfly wings was synthesized based on a two-step templating and in situ polymerization process. Black-Right-Pointing-Pointer The hierarchical structures down to nanometer level were kept in the resultant PPy replicas. Black-Right-Pointing-Pointer The PPy replicas exhibit brilliant color due to Bragg diffraction through its ordered periodic structures. Black-Right-Pointing-Pointer The PPy replicas showed a much higher biological activity compared with common PPy powders as a biosensor. - Abstract: Polypyrrole (PPy) with photonic crystal structures were synthesized from Morpho butterfly wings using a two-step templating process. In the first step photonic crystal SiO{sub 2} butterfly wings were synthesized from Morpho butterfly wings and in the second step the SiO{sub 2} butterfly wings were used as templates for the replication of PPy butterfly wings using an in situ polymerization method. The SiO{sub 2} templates were then removed from the PPy butterfly wings using a HF solution. The hierarchical structures down to the nanometer level, especially the photonic crystal structures, were retained in the final PPy replicas, as evidenced directly by field-emission scanning electron microscope (FE-SEM) and transmission electron microscopy (TEM). The optical properties of the resultant PPy replicas were investigated using reflectance spectroscopy and the PPy replicas exhibit brilliant color due to Bragg diffraction through its ordered periodic structures. The preliminary biosensing application was investigated and it was found that the PPy replicas showed a much higher biological activity compared with PPy powders through their response to dopamine (DA), probably due to the hierarchical structures as well as controlled porosity inherited from Morpho butterfly wings. It is expected that our strategy will open up new avenues for the synthesis of functional polymers with photonic

Generating functionals for quantum field theories with random potentials

International Nuclear Information System (INIS)

Jain, Mudit; Vanchurin, Vitaly

2016-01-01

We consider generating functionals for computing correlators in quantum field theories with random potentials. Examples of such theories include cosmological systems in context of the string theory landscape (e.g. cosmic inflation) or condensed matter systems with quenched disorder (e.g. spin glass). We use the so-called replica trick to define two different generating functionals for calculating correlators of the quantum fields averaged over a given distribution of random potentials. The first generating functional is appropriate for calculating averaged (in-out) amplitudes and involves a single replica of fields, but the replica limit is taken to an (unphysical) negative one number of fields outside of the path integral. When the number of replicas is doubled the generating functional can also be used for calculating averaged probabilities (squared amplitudes) using the in-in construction. The second generating functional involves an infinite number of replicas, but can be used for calculating both in-out and in-in correlators and the replica limits are taken to only a zero number of fields. We discuss the formalism in details for a single real scalar field, but the generalization to more fields or to different types of fields is straightforward. We work out three examples: one where the mass of scalar field is treated as a random variable and two where the functional form of interactions is random, one described by a Gaussian random field and the other by a Euclidean action in the field configuration space.

Biomimetic fabrication of WO3 for water splitting under visible light with high performance

International Nuclear Information System (INIS)

Yin, Chao; Zhu, Shenmin; Yao, Fan; Gu, Jiajun; Zhang, Wang; Chen, Zhixin; Zhang, Di

2013-01-01

Inspired by the high light-harvesting properties of typical butterfly wings, ceramic WO 3 butterfly wings with hierarchical structures of bio-butterfly wings was fabricated using a template of PapilioParis butterfly wings through a sol–gel method. The effect of calcination temperatures on the structures of the ceramic butterfly wings was investigated and the results showed that the WO 3 butterfly wing replica calcined at 550 °C (WO 3 replica-550) is a single phase and has a high crystallinity and relatively fine hierarchical structure. The average grain size of WO 3 replica-550 and WO 3 powder are around 32.6 and 42.2 nm, respectively. Compared with pure WO 3 powder, WO 3 replica-550 demonstrated a higher light-harvesting capability in the region from 460 to 700 nm and more importantly the higher charge separation rate, as evidenced by electron paramagnetic resonance measurements. Photocatalytic O 2 evolutions from water were investigated on the ceramic butterfly wings and pure WO 3 powder under visible light (λ > 420 nm). The results showed that the amount of O 2 produced from WO 3 replica-550 is 50 % higher than that of the pure WO 3 powder. The improved photocatalytic performance of WO 3 replica-550 is attributed to the quasi-honeycomb structure inherited from the PapilioParis butterfly wings, providing both high light-harvesting efficiency and efficient charge transport through the WO 3

Multiple cues produced by a robotic fish modulate aggressive behaviour in Siamese fighting fishes.

Science.gov (United States)

Romano, Donato; Benelli, Giovanni; Donati, Elisa; Remorini, Damiano; Canale, Angelo; Stefanini, Cesare

2017-07-05

The use of robotics to establish social interactions between animals and robots, represents an elegant and innovative method to investigate animal behaviour. However, robots are still underused to investigate high complex and flexible behaviours, such as aggression. Here, Betta splendens was tested as model system to shed light on the effect of a robotic fish eliciting aggression. We evaluated how multiple signal systems, including a light stimulus, affect aggressive responses in B. splendens. Furthermore, we conducted experiments to estimate if aggressive responses were triggered by the biomimetic shape of fish replica, or whether any intruder object was effective as well. Male fishes showed longer and higher aggressive displays as puzzled stimuli from the fish replica increased. When the fish replica emitted its full sequence of cues, the intensity of aggression exceeded even that produced by real fish opponents. Fish replica shape was necessary for conspecific opponent perception, evoking significant aggressive responses. Overall, this study highlights that the efficacy of an artificial opponent eliciting aggressive behaviour in fish can be boosted by exposure to multiple signals. Optimizing the cue combination delivered by the robotic fish replica may be helpful to predict escalating levels of aggression.

Effects of force fields on the conformational and dynamic properties of amyloid β(1-40) dimer explored by replica exchange molecular dynamics simulations.

Science.gov (United States)

Watts, Charles R; Gregory, Andrew; Frisbie, Cole; Lovas, Sándor

2018-03-01

The conformational space and structural ensembles of amyloid beta (Aβ) peptides and their oligomers in solution are inherently disordered and proven to be challenging to study. Optimum force field selection for molecular dynamics (MD) simulations and the biophysical relevance of results are still unknown. We compared the conformational space of the Aβ(1-40) dimers by 300 ns replica exchange MD simulations at physiological temperature (310 K) using: the AMBER-ff99sb-ILDN, AMBER-ff99sb*-ILDN, AMBER-ff99sb-NMR, and CHARMM22* force fields. Statistical comparisons of simulation results to experimental data and previously published simulations utilizing the CHARMM22* and CHARMM36 force fields were performed. All force fields yield sampled ensembles of conformations with collision cross sectional areas for the dimer that are statistically significantly larger than experimental results. All force fields, with the exception of AMBER-ff99sb-ILDN (8.8 ± 6.4%) and CHARMM36 (2.7 ± 4.2%), tend to overestimate the α-helical content compared to experimental CD (5.3 ± 5.2%). Using the AMBER-ff99sb-NMR force field resulted in the greatest degree of variance (41.3 ± 12.9%). Except for the AMBER-ff99sb-NMR force field, the others tended to under estimate the expected amount of β-sheet and over estimate the amount of turn/bend/random coil conformations. All force fields, with the exception AMBER-ff99sb-NMR, reproduce a theoretically expected β-sheet-turn-β-sheet conformational motif, however, only the CHARMM22* and CHARMM36 force fields yield results compatible with collapse of the central and C-terminal hydrophobic cores from residues 17-21 and 30-36. Although analyses of essential subspace sampling showed only minor variations between force fields, secondary structures of lowest energy conformers are different. © 2017 Wiley Periodicals, Inc.

Portfolio optimization problem with nonidentical variances of asset returns using statistical mechanical informatics

Science.gov (United States)

Shinzato, Takashi

2016-12-01

The portfolio optimization problem in which the variances of the return rates of assets are not identical is analyzed in this paper using the methodology of statistical mechanical informatics, specifically, replica analysis. We defined two characteristic quantities of an optimal portfolio, namely, minimal investment risk and investment concentration, in order to solve the portfolio optimization problem and analytically determined their asymptotical behaviors using replica analysis. Numerical experiments were also performed, and a comparison between the results of our simulation and those obtained via replica analysis validated our proposed method.

Process chain for fabrication of anisotropic optical functional surfaces on polymer components

DEFF Research Database (Denmark)

Li, Dongya; Zhang, Yang; Regi, Francesco

2017-01-01

. In order to implement the traceability ofthe manufacturing process, the geometry and dimension of the micro structure on the tool and the replica were assessed viametrological methods. The functionality of the anisotropic surfaces on the polymer replicas were evaluated by a gonioreflectometerand image...

Simulator of a geotermoelectric unit for the training of operators; Simulador de una unidad geotermoelectrica para entrenamiento de operadores

Energy Technology Data Exchange (ETDEWEB)

Tavira Mondragon, Jose Antonio; Lopez Aguilera, Diana Monica; Roldan Villasana, Edgardo Javier; Rodriguez Lozano, Saul [Instituto de Investigaciones Electricas, Temixco, Morelos (Mexico)

1999-07-01

The use of simulators replica in real time for operators training has demonstrated to be one of the best forms to enable the personnel of the Comision Federal de Electricidad (CFE). This article shows the basic characteristics of a simulator replica of the Cerro Prieto geotermoelectric power station of Baja California. It is expected that with this simulator 400 people between operators, shift superintendents and operation and maintenance auxiliary personnel become qualified. [Spanish] El uso de simuladores replica en tiempo real para entrenamiento de operadores de centrales generadoras ha demostrado ser una de las mejores formas de capacitar al personal de la Comision Federal de Electricidad (CFE). Este articulo muestra las caracteristicas principales de un simulador replica de la central geotermoelectrica de Cerro Prieto Baja California. Se espera que con este simulador se capaciten 400 personas entre operadores, superintendentes de turno y auxiliares de operacion y mantenimiento.

Biomimetic fabrication of WO{sub 3} for water splitting under visible light with high performance

Energy Technology Data Exchange (ETDEWEB)

Yin, Chao; Zhu, Shenmin, E-mail: smzhu@sjtu.edu.cn; Yao, Fan; Gu, Jiajun; Zhang, Wang [Shanghai Jiao Tong University, State Key Laboratory of Metal Matrix Composites (China); Chen, Zhixin [University of Wollongong, Faculty of Engineering (Australia); Zhang, Di, E-mail: zhangdi@sjtu.edu.cn [Shanghai Jiao Tong University, State Key Laboratory of Metal Matrix Composites (China)

2013-08-15

Inspired by the high light-harvesting properties of typical butterfly wings, ceramic WO{sub 3} butterfly wings with hierarchical structures of bio-butterfly wings was fabricated using a template of PapilioParis butterfly wings through a sol-gel method. The effect of calcination temperatures on the structures of the ceramic butterfly wings was investigated and the results showed that the WO{sub 3} butterfly wing replica calcined at 550 Degree-Sign C (WO{sub 3} replica-550) is a single phase and has a high crystallinity and relatively fine hierarchical structure. The average grain size of WO{sub 3} replica-550 and WO{sub 3} powder are around 32.6 and 42.2 nm, respectively. Compared with pure WO{sub 3} powder, WO{sub 3} replica-550 demonstrated a higher light-harvesting capability in the region from 460 to 700 nm and more importantly the higher charge separation rate, as evidenced by electron paramagnetic resonance measurements. Photocatalytic O{sub 2} evolutions from water were investigated on the ceramic butterfly wings and pure WO{sub 3} powder under visible light ({lambda} > 420 nm). The results showed that the amount of O{sub 2} produced from WO{sub 3} replica-550 is 50 % higher than that of the pure WO{sub 3} powder. The improved photocatalytic performance of WO{sub 3} replica-550 is attributed to the quasi-honeycomb structure inherited from the PapilioParis butterfly wings, providing both high light-harvesting efficiency and efficient charge transport through the WO{sub 3}.

Materials Chemistry and Performance of Silicone-Based Replicating Compounds.

Energy Technology Data Exchange (ETDEWEB)

Brumbach, Michael T.; Mirabal, Alex James; Kalan, Michael; Trujillo, Ana B; Hale, Kevin

2014-11-01

Replicating compounds are used to cast reproductions of surface features on a variety of materials. Replicas allow for quantitative measurements and recordkeeping on parts that may otherwise be difficult to measure or maintain. In this study, the chemistry and replicating capability of several replicating compounds was investigated. Additionally, the residue remaining on material surfaces upon removal of replicas was quantified. Cleaning practices were tested for several different replicating compounds. For all replicating compounds investigated, a thin silicone residue was left by the replica. For some compounds, additional inorganic species could be identified in the residue. Simple solvent cleaning could remove some residue.

Cliché fabrication method using precise roll printing process with 5 um pattern width

Science.gov (United States)

Shin, Yejin; Kim, Inyoung; Oh, Dong-Ho; Lee, Taik-Min

2016-09-01

Among the printing processes for printed electronic devices, gravure offset and reverse offset method have drawn attention for its fine pattern printing possibility. These printing methods use cliché, which has critical effect on the final product precision and quality. In this research, a novel precise cliché replica method is proposed. It consists of copper sputtering, precise mask pattern printing with 5 um width using reverse offset printing, Ni electroplating, lift-off, etching, and DLC coating. We finally compare the fabricated replica cliché with the original one and print out precise patterns using the replica cliché.

Untitled

Indian Academy of Sciences (India)

Abstract. A procedure for making high fidelity gold/palladium surface replicas of various low atomic number (Z) materials for SEM examination has been developed. The procedure facilitates simultaneous replication of a number of SEM specimens. These replicas provide improved image quality, elimination of charging and ...

Replication Strategy for Spatiotemporal Data Based on Distributed Caching System.

Science.gov (United States)

Xiong, Lian; Yang, Liu; Tao, Yang; Xu, Juan; Zhao, Lun

2018-01-14

The replica strategy in distributed cache can effectively reduce user access delay and improve system performance. However, developing a replica strategy suitable for varied application scenarios is still quite challenging, owing to differences in user access behavior and preferences. In this paper, a replication strategy for spatiotemporal data (RSSD) based on a distributed caching system is proposed. By taking advantage of the spatiotemporal locality and correlation of user access, RSSD mines high popularity and associated files from historical user access information, and then generates replicas and selects appropriate cache node for placement. Experimental results show that the RSSD algorithm is simple and efficient, and succeeds in significantly reducing user access delay.

Validation of newly developed physical laparoscopy simulator in transabdominal preperitoneal (TAPP) inguinal hernia repair.

Science.gov (United States)

Nishihara, Yuichi; Isobe, Yoh; Kitagawa, Yuko

2017-12-01

A realistic simulator for transabdominal preperitoneal (TAPP) inguinal hernia repair would enhance surgeons' training experience before they enter the operating theater. The purpose of this study was to create a novel physical simulator for TAPP inguinal hernia repair and obtain surgeons' opinions regarding its efficacy. Our novel TAPP inguinal hernia repair simulator consists of a physical laparoscopy simulator and a handmade organ replica model. The physical laparoscopy simulator was created by three-dimensional (3D) printing technology, and it represents the trunk of the human body and the bendability of the abdominal wall under pneumoperitoneal pressure. The organ replica model was manually created by assembling materials. The TAPP inguinal hernia repair simulator allows for the performance of all procedures required in TAPP inguinal hernia repair. Fifteen general surgeons performed TAPP inguinal hernia repair using our simulator. Their opinions were scored on a 5-point Likert scale. All participants strongly agreed that the 3D-printed physical simulator and organ replica model were highly useful for TAPP inguinal hernia repair training (median, 5 points) and TAPP inguinal hernia repair education (median, 5 points). They felt that the simulator would be effective for TAPP inguinal hernia repair training before entering the operating theater. All surgeons considered that this simulator should be introduced in the residency curriculum. We successfully created a physical simulator for TAPP inguinal hernia repair training using 3D printing technology and a handmade organ replica model created with inexpensive, readily accessible materials. Preoperative TAPP inguinal hernia repair training using this simulator and organ replica model may be of benefit in the training of all surgeons. All general surgeons involved in the present study felt that this simulator and organ replica model should be used in their residency curriculum.

A dynamic replication management strategy in distributed GIS

Science.gov (United States)

Pan, Shaoming; Xiong, Lian; Xu, Zhengquan; Chong, Yanwen; Meng, Qingxiang

2018-03-01

Replication strategy is one of effective solutions to meet the requirement of service response time by preparing data in advance to avoid the delay of reading data from disks. This paper presents a brand-new method to create copies considering the selection of replicas set, the number of copies for each replica and the placement strategy of all copies. First, the popularities of all data are computed considering both the historical access records and the timeliness of the records. Then, replica set can be selected based on their recent popularities. Also, an enhanced Q-value scheme is proposed to assign the number of copies for each replica. Finally, a reasonable copies placement strategy is designed to meet the requirement of load balance. In addition, we present several experiments that compare the proposed method with techniques that use other replication management strategies. The results show that the proposed model has better performance than other algorithms in all respects. Moreover, the experiments based on different parameters also demonstrated the effectiveness and adaptability of the proposed algorithm.

Multidimensional generalized-ensemble algorithms for complex systems.

Science.gov (United States)

Mitsutake, Ayori; Okamoto, Yuko

2009-06-07

We give general formulations of the multidimensional multicanonical algorithm, simulated tempering, and replica-exchange method. We generalize the original potential energy function E(0) by adding any physical quantity V of interest as a new energy term. These multidimensional generalized-ensemble algorithms then perform a random walk not only in E(0) space but also in V space. Among the three algorithms, the replica-exchange method is the easiest to perform because the weight factor is just a product of regular Boltzmann-like factors, while the weight factors for the multicanonical algorithm and simulated tempering are not a priori known. We give a simple procedure for obtaining the weight factors for these two latter algorithms, which uses a short replica-exchange simulation and the multiple-histogram reweighting techniques. As an example of applications of these algorithms, we have performed a two-dimensional replica-exchange simulation and a two-dimensional simulated-tempering simulation using an alpha-helical peptide system. From these simulations, we study the helix-coil transitions of the peptide in gas phase and in aqueous solution.

Federating LHCb datasets using the DIRAC File catalog

CERN Document Server

Haen, Christophe; Frank, Markus; Tsaregorodtsev, Andrei

2015-01-01

In the distributed computing model of LHCb the File Catalog (FC) is a central component that keeps track of each file and replica stored on the Grid. It is federating the LHCb data files in a logical namespace used by all LHCb applications. As a replica catalog, it is used for brokering jobs to sites where their input data is meant to be present, but also by jobs for finding alternative replicas if necessary. The LCG File Catalog (LFC) used originally by LHCb and other experiments is now being retired and needs to be replaced. The DIRAC File Catalog (DFC) was developed within the framework of the DIRAC Project and presented during CHEP 2012. From the technical point of view, the code powering the DFC follows an Aspect oriented programming (AOP): each type of entity that is manipulated by the DFC (Users, Files, Replicas, etc) is treated as a separate 'concern' in the AOP terminology. Hence, the database schema can also be adapted to the needs of a Virtual Organization. LHCb opted for a highly tuned MySQL datab...

Replication Strategy for Spatiotemporal Data Based on Distributed Caching System

Science.gov (United States)

Xiong, Lian; Tao, Yang; Xu, Juan; Zhao, Lun

2018-01-01

The replica strategy in distributed cache can effectively reduce user access delay and improve system performance. However, developing a replica strategy suitable for varied application scenarios is still quite challenging, owing to differences in user access behavior and preferences. In this paper, a replication strategy for spatiotemporal data (RSSD) based on a distributed caching system is proposed. By taking advantage of the spatiotemporal locality and correlation of user access, RSSD mines high popularity and associated files from historical user access information, and then generates replicas and selects appropriate cache node for placement. Experimental results show that the RSSD algorithm is simple and efficient, and succeeds in significantly reducing user access delay. PMID:29342897

Pressure induced increase of the exciton phonon interaction in ZnO/(ZnMg)O quantum wells

International Nuclear Information System (INIS)

Jarosz, D.; Suchocki, A.; Kozanecki, A.; Teisseyre, H.; Kamińska, A.

2016-01-01

It is a well-established experimental fact that exciton-phonon coupling is very efficient in ZnO. The intensities of the phonon-replicas in ZnO/(ZnMg)O quantum structures strongly depend on the internal electric field. We performed high-pressure measurements on the single ZnO/(ZnMg)O quantum well. We observed a strong increase of the intensity of the phonon-replicas relative to the zero phonon line. In our opinion this effect is related to pressure induced increase of the strain in quantum structure. As a consequence, an increase of the piezoelectric component of the electric field is observed which leads to an increase of the intensity of the phonon-replicas.

Unitary Transformation in Quantum Teleportation

International Nuclear Information System (INIS)

Wang Zhengchuan

2006-01-01

In the well-known treatment of quantum teleportation, the receiver should convert the state of his EPR particle into the replica of the unknown quantum state by one of four possible unitary transformations. However, the importance of these unitary transformations must be emphasized. We will show in this paper that the receiver cannot transform the state of his particle into an exact replica of the unknown state which the sender wants to transfer if he has not a proper implementation of these unitary transformations. In the procedure of converting state, the inevitable coupling between EPR particle and environment which is needed by the implementation of unitary transformations will reduce the accuracy of the replica.

Effects of the Pathogenic Mutation A117V and the Protective Mutation H111S on the Folding and Aggregation of PrP106-126: Insights from Replica Exchange Molecular Dynamics Simulations.

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Lulu Ning

Full Text Available The fragment 106-126 of prion protein exhibits similar properties to full-length prion. Experiments have shown that the A117V mutation enhances the aggregation of PrP106-126, while the H111S mutation abolishes the assembly. However, the mechanism of the change in the aggregation behavior of PrP106-126 upon the two mutations is not fully understood. In this study, replica exchange molecular dynamics simulations were performed to investigate the conformational ensemble of the WT PrP106-126 and its two mutants A117V and H111S. The obtained results indicate that the three species are all intrinsically disordered but they have distinct morphological differences. The A117V mutant has a higher propensity to form β-hairpin structures than the WT, while the H111S mutant has a higher population of helical structures. Furthermore, the A117V mutation increases the hydrophobic solvent accessible surface areas of PrP106-126 and the H111S mutation reduces the exposure of hydrophobic residues. It can be concluded that the difference in populations of β-hairpin structures and the change of hydrophobic solvent accessible areas may induce the different aggregation behaviors of the A117V and the H111S mutated PrP106-126. Understanding why the two mutations have contrary effects on the aggregation of PrP106-126 is very meaningful for further elucidation of the mechanism underlying aggregation and design of inhibitor against aggregation process.

Spectra of sparse random matrices

International Nuclear Information System (INIS)

Kuehn, Reimer

2008-01-01

We compute the spectral density for ensembles of sparse symmetric random matrices using replica. Our formulation of the replica-symmetric ansatz shares the symmetries of that suggested in a seminal paper by Rodgers and Bray (symmetry with respect to permutation of replica and rotation symmetry in the space of replica), but uses a different representation in terms of superpositions of Gaussians. It gives rise to a pair of integral equations which can be solved by a stochastic population-dynamics algorithm. Remarkably our representation allows us to identify pure-point contributions to the spectral density related to the existence of normalizable eigenstates. Our approach is not restricted to matrices defined on graphs with Poissonian degree distribution. Matrices defined on regular random graphs or on scale-free graphs, are easily handled. We also look at matrices with row constraints such as discrete graph Laplacians. Our approach naturally allows us to unfold the total density of states into contributions coming from vertices of different local coordinations and an example of such an unfolding is presented. Our results are well corroborated by numerical diagonalization studies of large finite random matrices

VVER-440 training simulators upgrades - Experience of CORYS T.E.S.S

International Nuclear Information System (INIS)

Bartak, J.; Fallon, B.

2006-01-01

The paper presents recent projects of upgrading screen operated simulators of VVER-440 nuclear power plants to full scale replica simulators, implemented by CORYS TESS. Control room replica full scope simulators were built for the Bohunice NPP in Slovakia and the Novovoronezh NPP in Russia. The scope of simulation was extended to reflect the current status of the units, which have undergone significant modernization programs over the last few years. The paper describes the software and hardware adaptations and evolutions of the existing simulators, the implementation in the simulator of modern supervision systems as well as of systems and equipment designed in the seventies and still used on the reference units. The training benefits of parallel use of control room replica and screen-operated simulators in the training process are discussed. (author)

Epoxy replication for Wolter x-ray microscope fabrication

International Nuclear Information System (INIS)

Priedhorsky, W.

1981-01-01

An epoxy replica of a test piece designed to simulate a Wolter x-ray microscope geometry showed no loss of x-ray reflectivity or resolution, compared to the original. The test piece was a diamond-turned cone with 1.5 0 half angle. A flat was fly-cut on one side, then super- and conventionally polished. The replica was separated at the 1.5 0 -draft angle, simulating a shallow angle Wolter microscope geometry. A test with 8.34 A x rays at 0.9 0 grazing angle showed a reflectivity of 67% for the replica flat surface, and 70% for the original. No spread of the reflected beam was observed with a 20-arc second wide test beam. This test verifies the epoxy replication technique for production of Wolter x-ray microscopes

Electroform/Plasma-Spray Laminates for X-Ray Optics

Science.gov (United States)

Ulmer, Melville P.; Graham, Michael; Vaynman, Semyon

2007-01-01

Electroform/plasma-spray laminates have shown promise as lightweight, strong, low-thermal-expansion components for xray optics. The basic idea is to exploit both (1) the well-established art of fabrication of optical components by replication and (2) plasma spraying as a means of reinforcing a thin replica optic with one or more backing layer(s) having tailorable thermomechanical properties. In x-ray optics as in other applications, replication reduces the time and cost of fabrication because grinding and polishing can be limited to a few thick masters, from which many lightweight replicas can thereafter be made. The first step in the fabrication of a component of the type in question is to make a replica optic by electroforming a thin layer of nickel on a master. Through proper control of the electroforming process conditions, it is possible to minimize residual stress and, hence, to minimize distortion in the replica. Next, a powder comprising ceramic particles coated with a metal compatible with the electroformed nickel is plasma-sprayed onto the backside of the nickel replica. Then through several repetitions and variations of the preceding steps or perhaps a small compressive stress, alternating layers of electroformed nickel and plasma-sprayed metal-coated ceramic powder are deposited. The thicknesses of the layers and the composition of the metal-coated ceramic powder are chosen to optimize the strength, areal mass density, and toughness of the finished component. An important benefit of using both electroforming and plasma spraying is the possibility of balancing stresses to a minimum level, which could be zero or perhaps a small net compressive stress designed to enhance the function of the component in its intended application.

A rational repeating template method for synthesis of 2D hexagonally ordered mesoporous precious metals.

Science.gov (United States)

Takai, Azusa; Doi, Yoji; Yamauchi, Yusuke; Kuroda, Kazuyuki

2011-03-01

A repeating template method is presented for the synthesis of mesoporous metals with 2D hexagonal mesostructures. First, a silica replica (i.e., silica nanorods arranged periodically) is prepared by using 2D hexagonally ordered mesoporous carbon as the template. After that, the obtained silica replica is used as the second template for the preparation of mesoporous ruthenium. After the ruthenium species are introduced into the silica replica, the ruthenium species are then reduced by a vapor-infiltration method by using the reducing agent dimethylamine borane. After the ruthenium deposition, the silica is chemically removed. Analysis by transmission and scanning electron microscopies, a nitrogen-adsorption-desorption isotherm, and small-angle X-ray scattering revealed that the mesoporous ruthenium had a 2D hexagonal mesostructure, although the mesostructural ordering is decreased compared to that of the original mesoporous carbon template. This method is widely applicable to other metal systems. By changing the metal species introduced into the silica replica, several mesoporous metals (palladium and platinum) can be synthesized. Ordered mesoporous ruthenium and palladium, which are not easily attainable by the soft-templating methods, can be prepared. This study has overcome the composition variation limitations of the soft-templating method. Copyright © 2011 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Phase behavior of random copolymers in quenched random media

International Nuclear Information System (INIS)

Chakraborty, A.K.; Shakhnovich, E.I.

1995-01-01

In this paper, we consider the behavior of random heteropolymers in a quenched disordered medium. We develop a field theory and obtain a mean-field solution that allows for replica symmetry breaking. The presence of an external disorder leads to the formation of compact states; a homopolymeric effect. We compute the phase diagram for two classes of problems. First, we consider the situation wherein the bare heteropolymer prefers like segments to segregate, and second, we examine cases where the bare heteropolymer prefers unlike segments to mix. For the first class of systems, we find a phase diagram characterized by a replica symmetry broken phase that exists below a particular temperature. This temperature grows with the strength of the external disorder. In the second class of situations, the phase diagram is much richer. Here we find two replica symmetry broken phases with different patterns separated by a reentrant phase. The reentrant phase and one of the two replica symmetry broken phases are induced by interactions with the external disorder. The dependence of the location of the phase boundaries on the strength of the external disorder are elucidated. We discuss our results from a physical standpoint, and note the testable experimental consequences of our findings. copyright 1995 American Institute of Physics

Belief Propagation Algorithm for Portfolio Optimization Problems.

Science.gov (United States)

Shinzato, Takashi; Yasuda, Muneki

2015-01-01

The typical behavior of optimal solutions to portfolio optimization problems with absolute deviation and expected shortfall models using replica analysis was pioneeringly estimated by S. Ciliberti et al. [Eur. Phys. B. 57, 175 (2007)]; however, they have not yet developed an approximate derivation method for finding the optimal portfolio with respect to a given return set. In this study, an approximation algorithm based on belief propagation for the portfolio optimization problem is presented using the Bethe free energy formalism, and the consistency of the numerical experimental results of the proposed algorithm with those of replica analysis is confirmed. Furthermore, the conjecture of H. Konno and H. Yamazaki, that the optimal solutions with the absolute deviation model and with the mean-variance model have the same typical behavior, is verified using replica analysis and the belief propagation algorithm.

Belief Propagation Algorithm for Portfolio Optimization Problems.

Directory of Open Access Journals (Sweden)

Takashi Shinzato

Full Text Available The typical behavior of optimal solutions to portfolio optimization problems with absolute deviation and expected shortfall models using replica analysis was pioneeringly estimated by S. Ciliberti et al. [Eur. Phys. B. 57, 175 (2007]; however, they have not yet developed an approximate derivation method for finding the optimal portfolio with respect to a given return set. In this study, an approximation algorithm based on belief propagation for the portfolio optimization problem is presented using the Bethe free energy formalism, and the consistency of the numerical experimental results of the proposed algorithm with those of replica analysis is confirmed. Furthermore, the conjecture of H. Konno and H. Yamazaki, that the optimal solutions with the absolute deviation model and with the mean-variance model have the same typical behavior, is verified using replica analysis and the belief propagation algorithm.

Software Replica of Minimal Living Processes

Science.gov (United States)

Bersini, Hugues

2010-04-01

There is a long tradition of software simulations in theoretical biology to complement pure analytical mathematics which are often limited to reproduce and understand the self-organization phenomena resulting from the non-linear and spatially grounded interactions of the huge number of diverse biological objects. Since John Von Neumann and Alan Turing pioneering works on self-replication and morphogenesis, proponents of artificial life have chosen to resolutely neglecting a lot of materialistic and quantitative information deemed not indispensable and have focused on the rule-based mechanisms making life possible, supposedly neutral with respect to their underlying material embodiment. Minimal life begins at the intersection of a series of processes which need to be isolated, differentiated and duplicated as such in computers. Only software developments and running make possible to understand the way these processes are intimately interconnected in order for life to appear at the crossroad. In this paper, I will attempt to set out the history of life as the disciples of artificial life understand it, by placing these different lessons on a temporal and causal axis, showing which one is indispensable to the appearance of the next and how does it connect to the next. I will discuss the task of artificial life as setting up experimental software platforms where these different lessons, whether taken in isolation or together, are tested, simulated, and, more systematically, analyzed. I will sketch some of these existing software platforms: chemical reaction networks, Varela’s autopoietic cellular automata, Ganti’s chemoton model, whose running delivers interesting take home messages to open-minded biologists.

Cuestiones ético-metodológicas frente a la réplica del experimento de Stanley Milgram, 45 años después Ethical and methodological issues involved in the replica of Stanley Milgram's experiment - 45 years later

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Gabriela Z. Salomone

2009-12-01

Full Text Available En 2009 se publicaron los resultados de la investigación de Jerry Burger, una réplica parcial del célebre estudio de Stanley Milgram sobre obediencia a la autoridad. A 45 años del experimento original, se reabrieron así discusiones éticas y metodológicas insoslayables. Tales cuestiones éticas se organizan en tres niveles diferentes: (1 Las premisas éticas para la utilización de consignas engañosas en la investigación científica: ¿cuáles son estas premisas? ¿por qué ha sido objetado el experimento de Milgram? ¿Es posible una réplica del experimento que salve tales objeciones?; (2 El contexto de aplicación de la investigación: ¿es posible utilizar sus resultados para explicar la obediencia a órdenes aberrantes en casos tan diversos como el nazismo, My Lai, la dictadura militar de Argentina 1976-83, Guantánamo o Abu Ghraib?; (3 Las condiciones para la transmisión de un experimento metodológica y conceptualmente controvertido: ¿cuáles son los principios éticos actualmente vigentes en materia de "objetividad en la enseñanza"? ¿qué supone, en el caso concreto de Milgram, ofrecer a estudiantes e investigadores una perspectiva ética sobre el problema? Como una contribución a este último punto, el presente artículo discute los parámetros actualmente vigentes en materia de Engaño en la investigación y Consentimiento Informado, analizando las implicancias ético-metodológicas de la "solución de los 150 voltios" propuesta por Burger en su réplica del experimento.The results of Jerry Burger's investigation, a partial replica of Stanley Milgram's famous study on obedience to authority, were published in 2009. 45 years after the original experiment was conducted, the ethical and methodological issues surrounding this study inevitably resurfaced. Said ethical issues can be organized into three different levels: (1 The ethical premises which outline the practice of deception in research. What are these premises? Why have

Computational aspects of the smectization process in liquid crystals: An example study of a perfectly aligned two-dimensional hard-boomerang system.

Science.gov (United States)

Chrzanowska, Agnieszka

2017-06-01

A replica method for calculation of smectic liquid crystal properties within the Onsager theory has been presented and applied to an exemplary case of two-dimensional perfectly aligned needlelike boomerangs. The method allows one to consider the complete influence of the interaction terms in contrast to the Fourier expansion method which uses mostly first or second order terms of expansion. The program based on the replica algorithm is able to calculate a single representative layer as an equivalent set of layers, depending on the size of the considered width of the sample integration interval. It predicts successfully smectic density distributions, energies, and layer thicknesses for different types of layer arrangement-of the antiferroelectric or of the smectic A order type. Specific features of the algorithm performance and influence of the numerical accuracy on the physical properties are presented. Future applications of the replica method to freely rotating molecules are discussed.

Computational aspects of the smectization process in liquid crystals: An example study of a perfectly aligned two-dimensional hard-boomerang system

Science.gov (United States)

Chrzanowska, Agnieszka

2017-06-01

A replica method for calculation of smectic liquid crystal properties within the Onsager theory has been presented and applied to an exemplary case of two-dimensional perfectly aligned needlelike boomerangs. The method allows one to consider the complete influence of the interaction terms in contrast to the Fourier expansion method which uses mostly first or second order terms of expansion. The program based on the replica algorithm is able to calculate a single representative layer as an equivalent set of layers, depending on the size of the considered width of the sample integration interval. It predicts successfully smectic density distributions, energies, and layer thicknesses for different types of layer arrangement—of the antiferroelectric or of the smectic A order type. Specific features of the algorithm performance and influence of the numerical accuracy on the physical properties are presented. Future applications of the replica method to freely rotating molecules are discussed.

Probing exciton density of states through phonon-assisted emission in GaN epilayers: A and B exciton contributions

Science.gov (United States)

Cavigli, Lucia; Gabrieli, Riccardo; Gurioli, Massimo; Bogani, Franco; Feltin, Eric; Carlin, Jean-François; Butté, Raphaël; Grandjean, Nicolas; Vinattieri, Anna

2010-09-01

A detailed experimental investigation of the phonon-assisted emission in a high-quality c -plane GaN epilayer is presented up to 200 K. By performing photoluminescence and reflectivity measurements, we find important etaloning effects in the phonon-replica spectra, which have to be corrected before addressing the lineshape analysis. Direct experimental evidence for free exciton thermalization is found for the whole temperature range investigated. A close comparison with existing models for phonon replicas originating from a thermalized free exciton distribution shows that the simplified and commonly adopted description of the exciton-phonon interaction with a single excitonic band leads to a large discrepancy with experimental data. Only the consideration of the complex nature of the excitonic band in GaN, including A and B exciton contributions, allows accounting for the temperature dependence of the peak energy, intensity, and lineshape of the phonon replicas.

New approach to accuracy verification of 3D surface models: An analysis of point cloud coordinates.

Science.gov (United States)

Lee, Wan-Sun; Park, Jong-Kyoung; Kim, Ji-Hwan; Kim, Hae-Young; Kim, Woong-Chul; Yu, Chin-Ho

2016-04-01

The precision of two types of surface digitization devices, i.e., a contact probe scanner and an optical scanner, and the trueness of two types of stone replicas, i.e., one without an imaging powder (SR/NP) and one with an imaging powder (SR/P), were evaluated using a computer-aided analysis. A master die was fabricated from stainless steel. Ten impressions were taken, and ten stone replicas were prepared from Type IV stone (Fujirock EP, GC, Leuven, Belgium). The precision of two types of scanners was analyzed using the root mean square (RMS), measurement error (ME), and limits of agreement (LoA) at each coordinate. The trueness of the stone replicas was evaluated using the total deviation. A Student's t-test was applied to compare the discrepancies between the CAD-reference-models of the master die (m-CRM) and point clouds for the two types of stone replicas (α=.05). The RMS values for the precision were 1.58, 1.28, and 0.98μm along the x-, y-, and z-axes in the contact probe scanner and 1.97, 1.32, and 1.33μm along the x-, y-, and z-axes in the optical scanner, respectively. A comparison with m-CRM revealed a trueness of 7.10μm for SR/NP and 8.65μm for SR/P. The precision at each coordinate (x-, y-, and z-axes) was revealed to be higher than the one assessed in the previous method (overall offset differences). A comparison between the m-CRM and 3D surface models of the stone replicas revealed a greater dimensional change in SR/P than in SR/NP. Copyright © 2015 Japan Prosthodontic Society. Published by Elsevier Ltd. All rights reserved.

Microstructured surfaces engineered using biological templates: a facile approach for the fabrication of superhydrophobic surfaces

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DUSAN LOSIC

2008-10-01

Full Text Available The fabrication of microstructured surfaces using biological templates was investigated with the aim of exploring of a facile and low cost approach for the fabrication of structured surfaces with superhydrophobic properties. Two soft lithographic techniques, i.e., replica moulding and nano-imprinting, were used to replicate the surfaces of a biological substrate. Leaves of the Agave plant (Agave attenuate, a cost-free biological template, were used as a model of a biosurface with superhydrophobic properties. The replication process was performed using two polymers: an elastomeric polymer, poly(dimethylsiloxane (PDMS, and a polyurethane (PU based, UV-curable polymer (NOA 60. In the first replication step, negative polymer replicas of the surface of leaves were fabricated, which were used as masters to fabricate positive polymer replicas by moulding and soft imprinting. The pattern with micro and nanostructures of the surface of the leaf possesses superhydrophobic properties, which was successfully replicated into both polymers. Finally, the positive replicas were coated with a thin gold film and modified with self-assembled monolayers (SAMs to verify the importance of the surface chemistry on the hydrophobic properties of the fabricated structures. Wetting (contact angle and structural (light microscopy and scanning electron microscopy characterisation was performed to confirm the hydrophobic properties of the fabricated surfaces (> 150°, as well as the precision and reproducibility of the replication process.

Neutron dosimetry of the Little Boy device

International Nuclear Information System (INIS)

Pederson, R.A.; Plassmann, E.A.

1984-01-01

Neutron dose rates at several angular locations and at distances out to 0.5 mile have been measured during critical operation of the Little Boy replica. We used modified remmetes and thermoluminescent dosimetry techniques for the measurements. The present status of our analysis is presented including estimates of the neutron-dose-relaxation length in air and the variation of the neutron-to-gamma-ray dose ratio with distance from the replica. These results are preliminary and are subject to detector calibration measurements

Optimizing bulk data transfers using network measurements: A practical case

International Nuclear Information System (INIS)

Ciuffoletti, A; Merola, L; Palmieri, F; Russo, G; Pardi, S

2010-01-01

In modern Data Grid infrastructures, we increasingly face the problem of providing the running applications with fast and reliable access to large data volumes, often geographically distributed across the network. As a direct consequence, the concept of replication has been adopted by the grid community to increase data availability and maximize job throughput. To be really effective, such process has to be driven by specific optimization strategies that define when and where replicas should be created or deleted on a per-site basis, and which replicas a job should use. These strategies have to take into account the available network bandwidth as a primary resource, prior to any consideration about storage or processing power. We present a novel replica management service, integrated within the Gluedomains active network monitoring architecture, designed and implemented within the centralized collective middleware framework of the SCoPE project to provide network-aware transfer services for data intensive Grid applications.

Characteristics and self-cleaning effect of the transparent super-hydrophobic film having nanofibers array structures

Science.gov (United States)

Lee, Kyungjun; Lyu, Sungnam; Lee, Sangmin; Kim, Youn Sang; Hwang, Woonbong

2010-09-01

Transparent super-hydrophobic films were fabricated using the PDMS method and silane process, based on anodization in phosphoric acid. Contact angle tests were performed to determine the contact angle of each film according to the anodizing time. Transmittance tests also were performed to obtain the transparency of each TPT (trimethylolpropane propoxylate triacrylate) replica film according to the anodizing time. The contact angle was determined by studying the drop shape, and the transmittance was measured using a UV-spectrometer. The contact angle increases with increasing anodizing time, because increasing pillar length can trap more air between the TPT replica film and a drop of water. The transmittance falls with increasing anodizing time because the increasing pillar length causes a scattering effect. This study shows that the pillar length and transparency are inversely proportional. The TPT replica film having nanofibers array structures was better than other films in aspect of self-cleaning by doing quantitative experimentation.

Deriving covariant holographic entanglement

Energy Technology Data Exchange (ETDEWEB)

Dong, Xi [School of Natural Sciences, Institute for Advanced Study, Princeton, NJ 08540 (United States); Lewkowycz, Aitor [Jadwin Hall, Princeton University, Princeton, NJ 08544 (United States); Rangamani, Mukund [Center for Quantum Mathematics and Physics (QMAP), Department of Physics, University of California, Davis, CA 95616 (United States)

2016-11-07

We provide a gravitational argument in favour of the covariant holographic entanglement entropy proposal. In general time-dependent states, the proposal asserts that the entanglement entropy of a region in the boundary field theory is given by a quarter of the area of a bulk extremal surface in Planck units. The main element of our discussion is an implementation of an appropriate Schwinger-Keldysh contour to obtain the reduced density matrix (and its powers) of a given region, as is relevant for the replica construction. We map this contour into the bulk gravitational theory, and argue that the saddle point solutions of these replica geometries lead to a consistent prescription for computing the field theory Rényi entropies. In the limiting case where the replica index is taken to unity, a local analysis suffices to show that these saddles lead to the extremal surfaces of interest. We also comment on various properties of holographic entanglement that follow from this construction.

Statistical mechanics approach to 1-bit compressed sensing

International Nuclear Information System (INIS)

Xu, Yingying; Kabashima, Yoshiyuki

2013-01-01

Compressed sensing is a framework that makes it possible to recover an N-dimensional sparse vector x∈R N from its linear transformation y∈R M of lower dimensionality M 1 -norm-based signal recovery scheme for 1-bit compressed sensing using statistical mechanics methods. We show that the signal recovery performance predicted by the replica method under the replica symmetric ansatz, which turns out to be locally unstable for modes breaking the replica symmetry, is in good consistency with experimental results of an approximate recovery algorithm developed earlier. This suggests that the l 1 -based recovery problem typically has many local optima of a similar recovery accuracy, which can be achieved by the approximate algorithm. We also develop another approximate recovery algorithm inspired by the cavity method. Numerical experiments show that when the density of nonzero entries in the original signal is relatively large the new algorithm offers better performance than the abovementioned scheme and does so with a lower computational cost. (paper)

Some spectral properties of the one-dimensional disordered Dirac equation

International Nuclear Information System (INIS)

Bocquet, Marc

1999-01-01

We study spectral properties of a one-dimensional Dirac equation with various disorder. We use replicas to calculate the exact density of state and typical localization length of a Dirac particle in several cases. We show that they can be calculated, in quite a simple fashion, in any type of disorder obeying a Gaussian white noise distribution. In addition to cases involving pure types of disorder, we study a mixed disorder case where the Dyson singularity is destroyed by the mixing. We also clarify the supersymmetric alternative derivation, even though it proves less efficient than the replica treatment for such thermodynamic quantities. We show that the smallest dynamical algebra in the Hamiltonian formalism is u(1,1), preferably to u(n,n) in the replica derivation or u(1, 1 vertical bar 2) in the supersymmetric alternative. Finally, we discuss symmetries in the disorder fields and show that there exists a non-trivial mapping between the electric potential disorder and the magnetic (or mass) disorder

Strong Carrier–Phonon Coupling in Lead Halide Perovskite Nanocrystals

Science.gov (United States)

2017-01-01

We highlight the importance of carrier–phonon coupling in inorganic lead halide perovskite nanocrystals. The low-temperature photoluminescence (PL) spectrum of CsPbBr3 has been investigated under a nonresonant and a nonstandard, quasi-resonant excitation scheme, and phonon replicas of the main PL band have been identified as due to the Fröhlich interaction. The energy of longitudinal optical (LO) phonons has been determined from the separation of the zero phonon band and phonon replicas. We reason that the observed LO phonon coupling can only be related to an orthorhombically distorted crystal structure of the perovskite nanocrystals. Additionally, the strength of carrier–phonon coupling has been characterized using the ratio between the intensities of the first phonon replica and the zero-phonon band. PL emission from localized versus delocalized carriers has been identified as the source of the observed discrepancies between the LO phonon energy and phonon coupling strength under quasi-resonant and nonresonant excitation conditions, respectively. PMID:29019652

Optical technologies for measurement and inspection

International Nuclear Information System (INIS)

Mader, D.L.

1997-01-01

Ontario Hydro has benefited from specialized optical measurement techniques such as FRILS (fret replica inspection laser system), which permits in-house inspections of pressure tube replicas and has been estimated to save $2M per year. This paper presents a brief overview of (1) FRILS, (2) OPIT (in-reactor Optical Profilometry Inspection Tool), (3) miniature optical probe for steam generator tubes, (4) laser vibrometer used for end-fitting vibration, and (5) computer vision to recognize the ends of fuel bundles and automatically measure their lengths. (author)

Spherical 2+p spin-glass model: An exactly solvable model for glass to spin-glass transition

International Nuclear Information System (INIS)

Crisanti, A.; Leuzzi, L.

2004-01-01

We present the full phase diagram of the spherical 2+p spin-glass model with p≥4. The main outcome is the presence of a phase with both properties of full replica symmetry breaking phases of discrete models, e.g., the Sherrington-Kirkpatrick model, and those of one replica symmetry breaking. This phase has a finite complexity which leads to different dynamic and static properties. The phase diagram is rich enough to allow the study of different kinds of glass to spin glass and spin glass to spin glass phase transitions

Changed Expression of Cytoskeleton Proteins During Lung Injury in a Mouse Model of Streptococcus pneumoniae Infection

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Mario Ferrer-Navarro

2018-05-01

Full Text Available Infections by Streptococcus pneumoniae are a major cause of morbidity and mortality worldwide, often causing community-acquired pneumonia, otitis media and also bacteremia and meningitis. Studies on S. pneumoniae are mainly focused on its virulence or capacity to evade the host immune system, but little is known about the injury caused in lungs during a pneumococcal infection. Herein we investigated this issue comparing the proteome profile of lungs from S. pneumoniae-infected mice with control mice by means of difference gel electrophoresis (DIGE technology. In order to obtain reliable results three biological replicas were used, and four technical replicas were carried out in each biological replica. Proteomic comparison was performed at two time points: 24 and 48 h post infection. A total of 91 proteins were identified with different abundance. We found important changes in the protein profiles during pneumococcal infection mainly associated with regulation of vesicle-mediated transport, wound healing, and cytoskeleton organization. In conclusion, the results obtained show that the cytoskeleton of the host cell is modified in S. pneumoniae infection.

Water flow in single rock joints

International Nuclear Information System (INIS)

Hakami, Eva

1989-05-01

To study the hydromechanical properties of single rock joints a technique to make transparent replicas of natural joint surfaces has been developed. Five different joint samples were replicated and studied. The aperture distribution of the joints were obtained through a measurement method provided by the transparent replicas. The principle behind the method is that a water drop with a known volume, which is placed inside a joint, will cover a certain area of the surface depending on the average size of aperture at the actual point. Flow tests were performed on the same joint replicas. The tortuousity of the flow and the velocity along single stream lines were measured using colour injections into the water flow through the joints. The equivalent hydraulic apertures determined from the flow tests where shown to be smaller than the average mechanical apertures. The velocity of the flow varies strongly between different paths over the joint depending on the spatial distribution of the apertures. The degree of matedness between the joint surfaces is an important factor influencing the channeling character of the joints. (author) (38 refs.)

Advanced on-site conceptual simulator for Forsmark 3

International Nuclear Information System (INIS)

Johansson, G.; Sjoestrand, K.

1984-01-01

On-site conceptual simulators have been extensively used at Swedish nuclear power plants. Despite having access to identical replica simulators, both the Swedish State Power Board and the Swedish private power industry have ordered conceptual simulators during 1982. The motivation has been that a complete training programme requires access to both a replica and a conceptual simulator. The replica simulator is perfect for training in control room behaviour but less appropriate for ensuring deeper process understanding. On the other hand, the conceptual simulator is not well suited for getting the personnel acquainted with the control room but is perfect for extending their knowledge of the plant processes. In order to give a realistic description of these processes, the conceptual simulator model must be fairly advanced. The Forsmark 3 conceptual simulator simulates the entire primary system, including the details of the steam and feedwater systems. Considerable attention has also been devoted to the presentation of calculated variables. For example, all the variables in the data base (approx. 6600) can be presented on colour-graphic CRTs as functions of time. (author)

A simple and effective approach towards biomimetic replication of photonic structures from butterfly wings.

Science.gov (United States)

Zhu, Shenmin; Zhang, Di; Chen, Zhixin; Gu, Jiajun; Li, Wenfei; Jiang, Haibo; Zhou, Gang

2009-08-05

A general sonochemical process is reported for the replication of photonic structures from Morpho butterfly wings in several hours. By selecting appropriate precursors, we can achieve exact replications of photonic structures in a variety of transparent metal oxides, such as titania, tin oxide and silica. The exact replications at the micro- and nanoscales were characterized by a combination of FE-SEM, TEM, EDX and Raman measurements. The optical properties of the replicas were investigated by using reflectance spectroscopy, and it was found that the interesting chromaticity of the reflected light could be adjusted simply by tuning the replica materials. An ultrasensitive SnO(2)-based chemical sensor was prepared from the SnO(2) replica. The sensor has a sensitivity of 35.3-50 ppm ethanol at 300 degrees C, accompanied by a rapid response and recovery (around 8-15 s), owing to its large surface area and photonic structure. Thus, this process could be developed to produce photonic structural ceramics which could be used in many passive and active infrared devices, especially high performance optical components and sensors.

Materials Suitable for preparing Inorganic Nanocasts of butterflies and other insects

International Nuclear Information System (INIS)

Silver, J; Fern, G R; Ireland, T G

2015-01-01

Replication of 3D-structures, in particular those that have a periodic modulation of a dielectric material at optical wavelengths and below have proven very difficult to fabricate. The majority of such replication techniques are complex or use moisture sensitive precursors requiring the use of for example a glove box. Here we demonstrate how an air stable supersaturated europium-doped yttrium nitrate phosphor precursor solution has the ability to easily impregnate a structure or produce a cast yielding faithful replicas composed of Y 2 O:Eu 3+ after a final short annealing step. New replicas of Lepidoptera (moth) wing scales using field emission scanning electron microscopy, structures down to 10 nm have been imaged. Moreover as these replicas are made of phosphors, their luminescence in some cases may be modulated by the internal periodic modulation built into their structures. In this work we will discuss more recent results on the use of the phosphors for making nanocasts of moth wing scales and show a range of beautiful pictures to show what the method can achieve. (paper)

A simple and effective approach towards biomimetic replication of photonic structures from butterfly wings

Energy Technology Data Exchange (ETDEWEB)

Zhu Shenmin; Zhang Di; Gu Jiajun; Li Wenfei; Jiang Haibo; Zhou Gang [State Key Lab of Metal Matrix Composites, Shanghai Jiao Tong University, Shanghai 200240 (China); Chen Zhixin, E-mail: smzhu@sjtu.edu.c, E-mail: zhangdi@sjtu.edu.c [Faculty of Engineering, University of Wollongong, Wollongong, NSW 2522 (Australia)

2009-08-05

A general sonochemical process is reported for the replication of photonic structures from Morpho butterfly wings in several hours. By selecting appropriate precursors, we can achieve exact replications of photonic structures in a variety of transparent metal oxides, such as titania, tin oxide and silica. The exact replications at the micro- and nanoscales were characterized by a combination of FE-SEM, TEM, EDX and Raman measurements. The optical properties of the replicas were investigated by using reflectance spectroscopy, and it was found that the interesting chromaticity of the reflected light could be adjusted simply by tuning the replica materials. An ultrasensitive SnO{sub 2}-based chemical sensor was prepared from the SnO{sub 2} replica. The sensor has a sensitivity of 35.3-50 ppm ethanol at 300 {sup 0}C, accompanied by a rapid response and recovery (around 8-15 s), owing to its large surface area and photonic structure. Thus, this process could be developed to produce photonic structural ceramics which could be used in many passive and active infrared devices, especially high performance optical components and sensors.

Protein folding simulations by generalized-ensemble algorithms.

Science.gov (United States)

Yoda, Takao; Sugita, Yuji; Okamoto, Yuko

2014-01-01

In the protein folding problem, conventional simulations in physical statistical mechanical ensembles, such as the canonical ensemble with fixed temperature, face a great difficulty. This is because there exist a huge number of local-minimum-energy states in the system and the conventional simulations tend to get trapped in these states, giving wrong results. Generalized-ensemble algorithms are based on artificial unphysical ensembles and overcome the above difficulty by performing random walks in potential energy, volume, and other physical quantities or their corresponding conjugate parameters such as temperature, pressure, etc. The advantage of generalized-ensemble simulations lies in the fact that they not only avoid getting trapped in states of energy local minima but also allows the calculations of physical quantities as functions of temperature or other parameters from a single simulation run. In this article we review the generalized-ensemble algorithms. Four examples, multicanonical algorithm, replica-exchange method, replica-exchange multicanonical algorithm, and multicanonical replica-exchange method, are described in detail. Examples of their applications to the protein folding problem are presented.

LHCb distributed conditions database

International Nuclear Information System (INIS)

Clemencic, M

2008-01-01

The LHCb Conditions Database project provides the necessary tools to handle non-event time-varying data. The main users of conditions are reconstruction and analysis processes, which are running on the Grid. To allow efficient access to the data, we need to use a synchronized replica of the content of the database located at the same site as the event data file, i.e. the LHCb Tier1. The replica to be accessed is selected from information stored on LFC (LCG File Catalog) and managed with the interface provided by the LCG developed library CORAL. The plan to limit the submission of jobs to those sites where the required conditions are available will also be presented. LHCb applications are using the Conditions Database framework on a production basis since March 2007. We have been able to collect statistics on the performance and effectiveness of both the LCG library COOL (the library providing conditions handling functionalities) and the distribution framework itself. Stress tests on the CNAF hosted replica of the Conditions Database have been performed and the results will be summarized here

MOLECULAR DESCRIPTION OF ELECTROLYTE SOLUTION IN A CARBON AEROGEL ELECTRODE

Directory of Open Access Journals (Sweden)

A.Kovalenko

2003-01-01

Full Text Available We develop a molecular theory of aqueous electrolyte solution sorbed in a nanoporous carbon aerogel electrode, based on the replica reference interaction site model (replica RISM for realistic molecular quenched-annealed systems. We also briefly review applications of carbon aerogels for supercapacitor and electrochemical separation devices, as well as theoretical and computer modelling of disordered porous materials. The replica RISM integral equation theory yields the microscopic properties of the electrochemical double layer formed at the surface of carbon aerogel nanopores, with due account of chemical specificities of both sorbed electrolyte and carbon aerogel material. The theory allows for spatial disorder of aerogel pores in the range from micro- to macroscopic size scale. We considered ambient aqueous solution of 1 M sodium chloride sorbed in two model nanoporous carbon aerogels with carbon nanoparticles either arranged into branched chains or randomly distributed. The long-range correlations of the carbon aerogel nanostructure substantially affect the properties of the electrochemical double layer formed by the solution sorbed in nanopores.

A simple and effective approach towards biomimetic replication of photonic structures from butterfly wings

International Nuclear Information System (INIS)

Zhu Shenmin; Zhang Di; Gu Jiajun; Li Wenfei; Jiang Haibo; Zhou Gang; Chen Zhixin

2009-01-01

A general sonochemical process is reported for the replication of photonic structures from Morpho butterfly wings in several hours. By selecting appropriate precursors, we can achieve exact replications of photonic structures in a variety of transparent metal oxides, such as titania, tin oxide and silica. The exact replications at the micro- and nanoscales were characterized by a combination of FE-SEM, TEM, EDX and Raman measurements. The optical properties of the replicas were investigated by using reflectance spectroscopy, and it was found that the interesting chromaticity of the reflected light could be adjusted simply by tuning the replica materials. An ultrasensitive SnO 2 -based chemical sensor was prepared from the SnO 2 replica. The sensor has a sensitivity of 35.3-50 ppm ethanol at 300 0 C, accompanied by a rapid response and recovery (around 8-15 s), owing to its large surface area and photonic structure. Thus, this process could be developed to produce photonic structural ceramics which could be used in many passive and active infrared devices, especially high performance optical components and sensors.

Acoustic sources of opportunity in the marine environment - Applied to source localization and ocean sensing

Science.gov (United States)

Verlinden, Christopher M.

Controlled acoustic sources have typically been used for imaging the ocean. These sources can either be used to locate objects or characterize the ocean environment. The processing involves signal extraction in the presence of ambient noise, with shipping being a major component of the latter. With the advent of the Automatic Identification System (AIS) which provides accurate locations of all large commercial vessels, these major noise sources can be converted from nuisance to beacons or sources of opportunity for the purpose of studying the ocean. The source localization method presented here is similar to traditional matched field processing, but differs in that libraries of data-derived measured replicas are used in place of modeled replicas. In order to account for differing source spectra between library and target vessels, cross-correlation functions are compared instead of comparing acoustic signals directly. The library of measured cross-correlation function replicas is extrapolated using waveguide invariant theory to fill gaps between ship tracks, fully populating the search grid with estimated replicas allowing for continuous tracking. In addition to source localization, two ocean sensing techniques are discussed in this dissertation. The feasibility of estimating ocean sound speed and temperature structure, using ship noise across a drifting volumetric array of hydrophones suspended beneath buoys, in a shallow water marine environment is investigated. Using the attenuation of acoustic energy along eigenray paths to invert for ocean properties such as temperature, salinity, and pH is also explored. In each of these cases, the theory is developed, tested using numerical simulations, and validated with data from acoustic field experiments.

Effect of two in-office whitening agents on the enamel surface in vivo: a morphological and non-contact profilometric study.

Science.gov (United States)

Cadenaro, Milena; Breschi, Lorenzo; Nucci, Cesare; Antoniolli, Francesca; Visintini, Erika; Prati, Carlo; Matis, Bruce A; Di Lenarda, Roberto

2008-01-01

This study evaluated the morphological effects produced in vivo by two in-office bleaching agents on enamel surface roughness using a noncontact profilometric analysis of epoxy replicas. The null hypothesis tested was that there would be no difference in the micromorphology of the enamel surface during or after bleaching with two different bleaching agents. Eighteen subjects were selected and randomly assigned to two treatment groups (n=9). The tooth whitening materials tested were 38% hydrogen peroxide (HP) (Opalescence Xtra Boost) and 35% carbamide peroxide (CP) (Rembrandt Quik Start). The bleaching agents were applied in accordance with manufacturer protocols. The treatments were repeated four times at one-week intervals. High precision impressions of the upper right incisor were taken at baseline as the control (CTRL) and after each bleaching treatment (T0: first application, T1: second application at one week, T2: third application at two weeks and T3: fourth application at three weeks). Epoxy resin replicas were poured from impressions, and the surface roughness was analyzed by means of a non-contact profilometer (Talysurf CLI 1000). Epoxy replicas were then observed using SEM. All data were statistically analyzed using ANOVA and differences were determined with a t-test. No significant differences in surface roughness were found on enamel replicas using either 38% hydrogen peroxide or 35% carbamide peroxide in vivo. This in vivo study supports the null hypothesis that two in-office bleaching agents, with either a high concentration of hydrogen or carbamide peroxide, do not alter enamel surface roughness, even after multiple applications.

An Ingenious Super Light Trapping Surface Templated from Butterfly Wing Scales

Science.gov (United States)

Han, Zhiwu; Li, Bo; Mu, Zhengzhi; Yang, Meng; Niu, Shichao; Zhang, Junqiu; Ren, Luquan

2015-08-01

Based on the super light trapping property of butterfly Trogonoptera brookiana wings, the SiO2 replica of this bionic functional surface was successfully synthesized using a simple and highly effective synthesis method combining a sol-gel process and subsequent selective etching. Firstly, the reflectivity of butterfly wing scales was carefully examined. It was found that the whole reflectance spectroscopy of the butterfly wings showed a lower level (less than 10 %) in the visible spectrum. Thus, it was confirmed that the butterfly wings possessed a super light trapping effect. Afterwards, the morphologies and detailed architectures of the butterfly wing scales were carefully investigated using the ultra-depth three-dimensional (3D) microscope and field emission scanning electronic microscopy (FESEM). It was composed by the parallel ridges and quasi-honeycomb-like structure between them. Based on the biological properties and function above, an exact SiO2 negative replica was fabricated through a synthesis method combining a sol-gel process and subsequent selective etching. At last, the comparative analysis of morphology feature size and the reflectance spectroscopy between the SiO2 negative replica and the flat plate was conducted. It could be concluded that the SiO2 negative replica inherited not only the original super light trapping architectures, but also the super light trapping characteristics of bio-template. This work may open up an avenue for the design and fabrication of super light trapping materials and encourage people to look for more super light trapping architectures in nature.

Replica-moulded polydimethylsiloxane culture vessel lids attenuate ...

Indian Academy of Sciences (India)

Prakash

In general, the longevity and functional availability of cell cultures are mainly .... environment by simply sealing the culture container. However, depending on the .... rate about twice as high as that through a 1 mm PDMS membrane, while it ...

Is Sputtering Sufficient for Production of Replicas?

Czech Academy of Sciences Publication Activity Database

Vaškovicová, Naděžda; Hrubanová, Kamila; Krzyžánek, Vladislav

2016-01-01

Roč. 22, S3 (2016), s. 44-45 ISSN 1431-9276 R&D Projects: GA MŠk(CZ) LO1212; GA MŠk ED0017/01/01 Institutional support: RVO:68081731 Keywords : biological structures * BAF060 * ACE600 * MED020 Subject RIV: JA - Electronics ; Optoelectronics, Electrical Engineering Impact factor: 1.891, year: 2016

Replica-moulded polydimethylsiloxane culture vessel lids attenuate ...

Indian Academy of Sciences (India)

Prakash

gases, which can be up to 100 times greater than natural or ... chemical technology (New York: John Wiley) pp 69–81 ... elastomer kit (product information) (www.dowcorning.com) ... expansion of transparent elastomeric media; Rev. Sci.

[Use of bacteriphages against Salmonella Enteritidis: a prevention tool].

Science.gov (United States)

García, Cristina; Marín, Clara; Catalá-Gregori, Pablo; Soriano, Jose Miguel

2015-06-01

Salmonellosis is a highly prevalent disease still searching for preventive tools to avoid contamination level priority public health. The in vitro effect of bacteriophages against Salmonella enteritidis was evaluated as a prevention tool. Two tests with three concentrations of bacteriophages were conducted against two strains of Salmonella Enteritidis inoculated in fresh faeces of laying hens. Each test had a positive control. Thus, four groups in each test were evaluated. Each experimental group included two replicates, and three plates were incubated per replicate. The concentrations tested were three: commercial solution (5 × 10(7) pfu/mL), and two dilutions (1/10 and 1/30). One of the strains tested was CECT 4300, a certified strain of Colección Española de Cultivo Tipo and the other a field isolated strain in a sacrificed hen farm. Both strains were inoculated at 1.3 × 10(5) cfu/g of faeces in each of the four groups. Isolation and identification of bacteria by ISO6579 was done at various times after inoculation: 1 minute, 24 hours and 7 days. In the first test, with certified strain, Salmonella was isolated in all groups at time 1 minute. After 24 hours, Salmonella was isolated in all groups except in one of the replicas treated with 1/10 dilution of bacteriophages, one of the other replica plate treated with 1/10 dilution, and two plates of the two replicas treated with the commercial solution. After 7 days, the bacteria were not isolated from any of the experimental groups. In the second test, with the field strain, Salmonella was isolated in all groups at time 1 minute. After 24 hours, Salmonella was isolated in all groups except in one of the replicas treated with 1/10 dilution of bacteriophages and the two replicas treated with the commercial solution. Salmonella was not isolated in any of the experimental groups at 7 days. The use of bacteriophages reduced Salmonella enteritidis isolates in faeces at 24 hours after the application, so it could be

Review of Dactyl: an Interactive 3D Osteology App [iPad

Directory of Open Access Journals (Sweden)

Reviewed by Alison Atkin

2015-01-01

Full Text Available The study of human osteology has always relied on access to real skeletal remains from collections for teaching, learning, and reference. it has long been supplemented by representational and replica materials, some two-dimensional, such as illustrations and photographs, and others three-dimensional, such as casts and, more recently, 3D digital objects. All are important aids in the study of osteology; however, some of the most exciting advances have recently been made in interactive 3D digital osteology objects. In recent years with the adoption of 3D scanning technology in osteology, such as CT, MRI, laser, and structured light scanners, these 3D digital objects are no longer limited to computer-generated representations, and now include replicas of real human skeletal remains. These can be presented with photo-realistic colours, dynamic textures, and detailed features, and as such they represent a major shift forward in interactive 3D digital osteology. Dactyl, the focus of this review, is the newest addition to this area and is the first to incorporate all of the key advances into one resource: an app that uses tactile response to interact with high-quality replica 3D digital objects.

Biases in Monte Carlo eigenvalue calculations

Energy Technology Data Exchange (ETDEWEB)

Gelbard, E.M.

1992-12-01

The Monte Carlo method has been used for many years to analyze the neutronics of nuclear reactors. In fact, as the power of computers has increased the importance of Monte Carlo in neutronics has also increased, until today this method plays a central role in reactor analysis and design. Monte Carlo is used in neutronics for two somewhat different purposes, i.e., (a) to compute the distribution of neutrons in a given medium when the neutron source-density is specified, and (b) to compute the neutron distribution in a self-sustaining chain reaction, in which case the source is determined as the eigenvector of a certain linear operator. In (b), then, the source is not given, but must be computed. In the first case (the ``fixed-source`` case) the Monte Carlo calculation is unbiased. That is to say that, if the calculation is repeated (``replicated``) over and over, with independent random number sequences for each replica, then averages over all replicas will approach the correct neutron distribution as the number of replicas goes to infinity. Unfortunately, the computation is not unbiased in the second case, which we discuss here.

Biases in Monte Carlo eigenvalue calculations

Energy Technology Data Exchange (ETDEWEB)

Gelbard, E.M.

1992-01-01

The Monte Carlo method has been used for many years to analyze the neutronics of nuclear reactors. In fact, as the power of computers has increased the importance of Monte Carlo in neutronics has also increased, until today this method plays a central role in reactor analysis and design. Monte Carlo is used in neutronics for two somewhat different purposes, i.e., (a) to compute the distribution of neutrons in a given medium when the neutron source-density is specified, and (b) to compute the neutron distribution in a self-sustaining chain reaction, in which case the source is determined as the eigenvector of a certain linear operator. In (b), then, the source is not given, but must be computed. In the first case (the fixed-source'' case) the Monte Carlo calculation is unbiased. That is to say that, if the calculation is repeated ( replicated'') over and over, with independent random number sequences for each replica, then averages over all replicas will approach the correct neutron distribution as the number of replicas goes to infinity. Unfortunately, the computation is not unbiased in the second case, which we discuss here.

On Consistency of Operational Transformation Approach

Directory of Open Access Journals (Sweden)

Aurel Randolph

2013-02-01

Full Text Available The Operational Transformation (OT approach, used in many collaborative editors, allows a group of users to concurrently update replicas of a shared object and exchange their updates in any order. The basic idea of this approach is to transform any received update operation before its execution on a replica of the object. This transformation aims to ensure the convergence of the different replicas of the object, even though the operations are executed in different orders. However, designing transformation functions for achieving convergence is a critical and challenging issue. Indeed, the transformation functions proposed in the literature are all revealed incorrect. In this paper, we investigate the existence of transformation functions for a shared string altered by insert and delete operations. From the theoretical point of view, two properties – named TP1 and TP2 – are necessary and sufficient to ensure convergence. Using controller synthesis technique, we show that there are some transformation functions which satisfy only TP1 for the basic signatures of insert and delete operations. As a matter of fact, it is impossible to meet both properties TP1 and TP2 with these simple signatures.

Surgical positioning of orthodontic mini-implants with guides fabricated on models replicated with cone-beam computed tomography.

Science.gov (United States)

Kim, Seong-Hun; Choi, Yong-Suk; Hwang, Eui-Hwan; Chung, Kyu-Rhim; Kook, Yoon-Ah; Nelson, Gerald

2007-04-01

This article illustrates a new surgical guide system that uses cone-beam computed tomography (CBCT) images to replicate dental models; surgical guides for the proper positioning of orthodontic mini-implants were fabricated on the replicas, and the guides were used for precise placement. The indications, efficacy, and possible complications of this method are discussed. Patients who were planning to have orthodontic mini-implant treatment were recruited for this study. A CBCT system (PSR 9000N, Asahi Roentgen, Kyoto, Japan) was used to acquire virtual slices of the posterior maxilla that were 0.1 to 0.15 mm thick. Color 3-dimensional rapid prototyping was used to differentiate teeth, alveolus, and maxillary sinus wall. A surgical guide for the mini-implant was fabricated on the replica model. Proper positioning for mini-implants on the posterior maxilla was determined by viewing the CBCT images. The surgical guide was placed on the clinical site, and it allowed precise pilot drilling and accurate placement of the mini-implant. CBCT imaging allows remarkably lower radiation doses and thinner acquisition slices compared with medical computed tomography. Virtually reproduced replica models enable precise planning for mini-implant positions in anatomically complex sites.

Biases in Monte Carlo eigenvalue calculations

International Nuclear Information System (INIS)

Gelbard, E.M.

1992-01-01

The Monte Carlo method has been used for many years to analyze the neutronics of nuclear reactors. In fact, as the power of computers has increased the importance of Monte Carlo in neutronics has also increased, until today this method plays a central role in reactor analysis and design. Monte Carlo is used in neutronics for two somewhat different purposes, i.e., (a) to compute the distribution of neutrons in a given medium when the neutron source-density is specified, and (b) to compute the neutron distribution in a self-sustaining chain reaction, in which case the source is determined as the eigenvector of a certain linear operator. In (b), then, the source is not given, but must be computed. In the first case (the ''fixed-source'' case) the Monte Carlo calculation is unbiased. That is to say that, if the calculation is repeated (''replicated'') over and over, with independent random number sequences for each replica, then averages over all replicas will approach the correct neutron distribution as the number of replicas goes to infinity. Unfortunately, the computation is not unbiased in the second case, which we discuss here

Composite systems of dilute and dense couplings

International Nuclear Information System (INIS)

Raymond, J R; Saad, D

2008-01-01

Composite systems, where couplings are of two types, a combination of strong dilute and weak dense couplings of Ising spins, are examined through the replica method. The dilute and dense parts are considered to have independent canonical disordered or uniform bond distributions; mixing the models by variation of a parameter γ alongside inverse temperature β we analyse the respective thermodynamic solutions. We describe the variation in high temperature transitions as mixing occurs; in the vicinity of these transitions we exactly analyse the competing effects of the dense and sparse models. By using the replica symmetric ansatz and population dynamics we described the low temperature behaviour of mixed systems

Replication technique for examining defects in the interface of a metal-to-glass ceramic bond

International Nuclear Information System (INIS)

Spears, R.K.

1978-01-01

Epoxy replicas were made of the interface of a molybdenum and glass-ceramic assembly and examined by scanning electron microscopy. Replications of this interface were produced by first removing the molybdenum from four assemblies using a nitric acid-based etchant. The glass-ceramic insulators that remained were pressure encapsulated in epoxy. After curing, the glass-ceramics were etched from the epoxy in an hydrogen fluoride-based acid etchant. The resulting replicas resembled the texture of the molybdenum surface with the interface defects shown in detail as projections. This process revealed some unusual interface problems which appeared to be associated with the evolution of gas from the molybdenum piece parts

Superposition of the luminescence spectra of free and bound excitons in ZnP2-D48

International Nuclear Information System (INIS)

Stamov, Ion; Nemerenco, Lucretia; Ivanenco, Iurii; Syrbu, Nicolae

2011-01-01

The luminescence spectra of ZnP 2 tetragonal crystals doped Mn, Sn, Cd, Sb at 10 K emission lines of bound excitons is detected. In the spectra non-phonon emission lines of bound and free excitons and their phonon replicas is isolated. The emission lines by the levels of the axial center are described. The composition of the luminescence of free and bound excitons at the axial center is investigated. In the region of phonon replicas of free excitons observed enhancement of lines due to forbidden transitions involving the recombination of excitons. A model of optic recombination transitions of the axial centre is proposed

Paraxial light distribution in the focal region of a lens: a comparison of several analytical solutions and a numerical result

Science.gov (United States)

Wu, Yang; Kelly, Damien P.

2014-12-01

The distribution of the complex field in the focal region of a lens is a classical optical diffraction problem. Today, it remains of significant theoretical importance for understanding the properties of imaging systems. In the paraxial regime, it is possible to find analytical solutions in the neighborhood of the focus, when a plane wave is incident on a focusing lens whose finite extent is limited by a circular aperture. For example, in Born and Wolf's treatment of this problem, two different, but mathematically equivalent analytical solutions, are presented that describe the 3D field distribution using infinite sums of ? and ? type Lommel functions. An alternative solution expresses the distribution in terms of Zernike polynomials, and was presented by Nijboer in 1947. More recently, Cao derived an alternative analytical solution by expanding the Fresnel kernel using a Taylor series expansion. In practical calculations, however, only a finite number of terms from these infinite series expansions is actually used to calculate the distribution in the focal region. In this manuscript, we compare and contrast each of these different solutions to a numerically calculated result, paying particular attention to how quickly each solution converges for a range of different spatial locations behind the focusing lens. We also examine the time taken to calculate each of the analytical solutions. The numerical solution is calculated in a polar coordinate system and is semi-analytic. The integration over the angle is solved analytically, while the radial coordinate is sampled with a sampling interval of ? and then numerically integrated. This produces an infinite set of replicas in the diffraction plane, that are located in circular rings centered at the optical axis and each with radii given by ?, where ? is the replica order. These circular replicas are shown to be fundamentally different from the replicas that arise in a Cartesian coordinate system.

Continuous-variable quantum cloning of coherent states with phase-conjugate input modes using linear optics

International Nuclear Information System (INIS)

Chen, Haixia; Zhang, Jing

2007-01-01

We propose a scheme for continuous-variable quantum cloning of coherent states with phase-conjugate input modes using linear optics. The quantum cloning machine yields M identical optimal clones from N replicas of a coherent state and N replicas of its phase conjugate. This scheme can be straightforwardly implemented with the setups accessible at present since its optical implementation only employs simple linear optical elements and homodyne detection. Compared with the original scheme for continuous-variable quantum cloning with phase-conjugate input modes proposed by Cerf and Iblisdir [Phys. Rev. Lett. 87, 247903 (2001)], which utilized a nondegenerate optical parametric amplifier, our scheme loses the output of phase-conjugate clones and is regarded as irreversible quantum cloning

On the formal equivalence of the TAP and thermodynamic methods in the SK model

International Nuclear Information System (INIS)

Cavagna, Andrea; Giardina, Irene; Parisi, Giorgio; Mezard, Marc

2003-01-01

We revisit two classic Thouless-Anderson-Palmer (TAP) studies of the Sherrington-Kirkpatrick model (Bray A J and Moore M A 1980 J. Phys. C: Solid State Phys. 13 L469; De Dominicis C and Young A P 1983 J. Phys. A: Math. Gen. 16 2063). By using the Becchi-Rouet-Stora-Tyutin (BRST) supersymmetry, we prove the general equivalence of TAP and replica partition functions, and show that the annealed calculation of the TAP complexity is formally identical to the quenched thermodynamic calculation of the free energy at one step level of replica symmetry breaking. The complexity we obtain by means of the BRST symmetry turns out to be considerably smaller than the previous non-symmetric value

On the validity and robustness of the scale error phenomenon in early childhood.

Science.gov (United States)

DeLoache, Judy S; LoBue, Vanessa; Vanderborght, Mieke; Chiong, Cynthia

2013-02-01

Scale errors is a term referring to very young children's serious efforts to perform actions on miniature replica objects that are impossible due to great differences in the size of the child's body and the size of the target objects. We report three studies providing further documentation of scale errors and investigating the validity and robustness of the phenomenon. In the first, we establish that 2-year-olds' behavior in response to prompts to "pretend" with miniature replica objects differs dramatically from scale errors. The second and third studies address the robustness of the phenomenon and its relative imperviousness to attempts to influence the rate of scale errors. Copyright © 2012 Elsevier Inc. All rights reserved.

The use of a 3D laser scanner using superimpositional software to assess the accuracy of impression techniques.

Science.gov (United States)

Shah, Sinal; Sundaram, Geeta; Bartlett, David; Sherriff, Martyn

2004-11-01

Several studies have made comparisons in the dimensional accuracy of different elastomeric impression materials. Most have used two-dimensional measuring devices, which neglect to account for the dimensional changes that exist along a three-dimensional surface. The aim of this study was to compare the dimensional accuracy of an impression technique using a polyether material (Impregum) and a vinyl poly siloxane material (President) using a laser scanner with three-dimensional superimpositional software. Twenty impressions, 10 with a polyether and 10 with addition silicone, of a stone master model that resembled a dental arch containing three acrylic posterior teeth were cast in orthodontic stone. One plastic tooth was prepared for a metal crown. The master model and the casts were digitised with the non-contacting laser scanner to produce a 3D image. 3D surface viewer software superimposed the master model to the stone replica and the difference between the images analysed. The mean difference between the model and the stone replica made from Impregum was 0.072mm (SD 0.006) and that for the silicone 0.097mm (SD 0.005) and this difference was statistically significantly, p=0.001. Both impression materials provided an accurate replica of the prepared teeth supporting the view that these materials are highly accurate.

Batesian mimicry promotes pre- and postmating isolation in a snake mimicry complex.

Science.gov (United States)

Pfennig, David W; Akcali, Christopher K; Kikuchi, David W

2015-04-01

We evaluated whether Batesian mimicry promotes early-stage reproductive isolation. Many Batesian mimics occur not only in sympatry with their model (as expected), but also in allopatry. As a consequence of local adaptation within both sympatry (where mimetic traits are favored) and allopatry (where nonmimetic traits are favored), divergent, predator-mediated natural selection should disfavor immigrants between these selective environments as well as any between-environment hybrids. This selection might form the basis for both pre- and postmating isolation, respectively. We tested for such selection in a snake mimicry complex by placing clay replicas of sympatric, allopatric, or hybrid phenotypes in both sympatry and allopatry and measuring predation attempts. As predicted, replicas with immigrant phenotypes were disfavored in both selective environments. Replicas with hybrid phenotypes were also disfavored, but only in a region of sympatry where previous studies have detected strong selection favoring precise mimicry. By fostering immigrant inviability and ecologically dependent selection against hybrids (at least in some habitats), Batesian mimicry might therefore promote reproductive isolation. Thus, although Batesian mimicry has long been viewed as a mechanism for convergent evolution, it might play an underappreciated role in fueling divergent evolution and possibly even the evolution of reproductive isolation and speciation. © 2015 The Author(s).

Replica casting technique for micro Fresnel lenses characterization

DEFF Research Database (Denmark)

Gasparin, Stefania; Tosello, Guido; Hansen, Hans Nørgaard

2012-01-01

The available measuring techniques are not always suitable for the characterization of optical surfaces such as Fresnel lenses or polished specimens. A way to overcome these challenges is to reproduce the optical components surface using a polymer casting method and to measure the replicated...

Replica scale modelling of long rod tank penetrators

NARCIS (Netherlands)

Diederen, A.M.; Hoeneveld, J.C.

2001-01-01

Experiments and simulations have been conducted using scale size tungsten alloy penetrators at ordnance velocity against an oblique plate array consisting of an inert sandwich and a base armour. The penetrators are made from 2 types of tungsten alloy with different tensile strength. Two scale sizes

The Weighing Chair of Sanctorius Sanctorius: A Replica.

Science.gov (United States)

Hollerbach, Teresa

2018-05-14

In 1614, the physician Sanctorius Sanctorius (1561-1636) published his most famous work entitled Ars […] de statica medicina (On static medicine). This is a work composed of aphorisms that present the practical results of a series of weighing procedures, rather than theoretical observations. De statica medicina is the result of a large number of test series that Sanctorius carried out over many years with the weighing chair he constructed himself in order to quantify the so-called perspiratio insensibilis, an insensible perspiration of the human body. Through his weighing experiments, Sanctorius introduced the idea of quantitative research into physiology. Although historical accounts ascribe an important role to Sanctorius as the founder of a new medical science, up until now the design of his weighing chair and the method of measurement have not been closely analysed. The aim of this paper is to close this gap. Through a collaboration between the Max Planck Institute for the History of Science and the Technical University of Berlin (Institute of Vocational Education and Work Studies), Sanctorius's weighing chair was reconstructed and experiments carried out with it. This opened new perspectives on Sanctorius's work and led to a reconsideration of the function and purpose of his weighing chair. With his static medicine, Sanctorius repurposed an old instrument. The replication of the weighing chair and the repetition of the experiments demonstrate that this novel application of scales posed some challenges for the mechanical design of the instrument. We recognized that the instrument fulfilled different functions that might in turn have affected its design, precision, and the measuring method applied. Although in the end we could not clarify how Sanctorius actually conducted his measurements, we were nevertheless able to develop an understanding of Sanctorius's mechanical and practical knowledge that would not have been possible for us to develop solely on the basis of the written sources.

Transient Localization in Shallow Water Environments

National Research Council Canada - National Science Library

Brune, Joachim

1998-01-01

.... A full-wave PE model is used to produce broadband replicas. Both model-generated synthetic signals, which provide baseline results, and measured pulses in a shallow water environment are analyzed...

REPLICATION TOOL AND METHOD OF PROVIDING A REPLICATION TOOL

DEFF Research Database (Denmark)

2016-01-01

The invention relates to a replication tool (1, 1a, 1b) for producing a part (4) with a microscale textured replica surface (5a, 5b, 5c, 5d). The replication tool (1, 1a, 1b) comprises a tool surface (2a, 2b) defining a general shape of the item. The tool surface (2a, 2b) comprises a microscale...... energy directors on flange portions thereof uses the replication tool (1, 1a, 1b) to form an item (4) with a general shape as defined by the tool surface (2a, 2b). The formed item (4) comprises a microscale textured replica surface (5a, 5b, 5c, 5d) with a lateral arrangement of polydisperse microscale...

Digital circuit for the introduction and later removal of dither from an analog signal

Science.gov (United States)

Borgen, Gary S.

1994-05-01

An electronics circuit is presented for accurately digitizing an analog audio or like data signal into a digital equivalent signal by introducing dither into the analog signal and then subsequently removing the dither from the digitized signal prior to its conversion to an analog signal which is a substantial replica of the incoming analog audio or like data signal. The electronics circuit of the present invention is characterized by a first pseudo-random number generator which generates digital random noise signals or dither for addition to the digital equivalent signal and a second pseudo-random number generator which generates subtractive digital random noise signals for the subsequent removal of dither from the digital equivalent signal prior its conversion to the analog replica signal.

System upgradation for surface mode negative ion beam extraction experiments in ROBIN

International Nuclear Information System (INIS)

Pandya, Kaushal; Bansal, Gourab; Soni, Jignesh

2015-01-01

ROBIN (Replica Of BATMAN source in India) is a replica of BATMAN source of IPP, Garching. Plasma production (inductively coupled, RF produced plasma), plasma diagnostic (langmuir probe, optical emission spectroscopy), negative ion beam extraction in volume mode with reduced extraction area of 2 cm 2 (4 apertures) using small bench top type power supply (10kV, 400mA), with increase extraction area of 73 cm 2 (146 apertures) and using actual power supplies (Extraction Power Supply System, EPSS (11kV, 35A), and Accelerator Power Supply System, APSS (35kV, 15A)) and beam diagnostic etc have been performed successfully in ROBIN. This paper will describe the details of the system upgradation for surface mode negative ion experiments and its performance in ROBIN

[Cervical adaptation of complete cast crowns of various metal alloys, with and without die spacers].

Science.gov (United States)

Stephano, C B; Roselino, R F; Roselino, R B; Campos, G M

1989-01-01

A metallic replica from a dental preparation for crown was used to make 8 class-IV stone dies. The wax patterns for the casting of the crowns were obtained in two conditions: a) from the stone die with no spacer; and b) from the stone die with an acrylic spacer. Thus, 64 metallic crowns were casted, using 4 different alloys: DURACAST (Cu-Al), NICROCAST (Ni-Cr) and DURABOND (Ni-Cr), and gold. The casted crowns were fitted in the metallic replica and measured as to the cervical discrepance of fitting. The results showed that the use of die spacers decreases the clinical discrepancies of fitting of the casted crowns (in a statistically significant level), no matter the metallic alloy employed.

Maximizing and minimizing investment concentration with constraints of budget and investment risk

Science.gov (United States)

Shinzato, Takashi

2018-01-01

In this paper, as a first step in examining the properties of a feasible portfolio subset that is characterized by budget and risk constraints, we assess the maximum and minimum of the investment concentration using replica analysis. To do this, we apply an analytical approach of statistical mechanics. We note that the optimization problem considered in this paper is the dual problem of the portfolio optimization problem discussed in the literature, and we verify that these optimal solutions are also dual. We also present numerical experiments, in which we use the method of steepest descent that is based on Lagrange's method of undetermined multipliers, and we compare the numerical results to those obtained by replica analysis in order to assess the effectiveness of our proposed approach.

Structural changes of carbides in a high-speed steel - M2 - after hardness and drawing back

International Nuclear Information System (INIS)

Santos, D.B.; Luz Ferreira, O. da; Ribeiro, O.L.R.

1984-01-01

The microstructure of a high-speed steel was studied through the scanning electron microscope. The carbide chemical composition was determined by the X-ray energy spectroscopy. The analyses were done in situ and in precipitate extracted from carbon replica. The phases were shown through the X-ray diffraction in the wastes from electrolytic use. In the annealed structure, some carbides as M 6 C, MC and M 23 C 6 and in the annealed and drawing back structure, carbide as M 6 C and MC were seen. The volumetric fraction of each type was calculated by quantitative metalography. The utilization of the replica technique allows the analysis of carbides smaller than 1 μm without the matrix interference. (E.G.) [pt

75 FR 34426 - Notice of Petitions by Firms for Determination of Eligibility To Apply for Trade Adjustment...

Science.gov (United States)

2010-06-17

..., WI 53186. latching, u-frame, actuators, high speed, tubular and valve solenoids. Valley Fastener... Gifts, LLC........ 5465 Woodbine Avenue, 6/7/2010 The firm produces laser cut replicas of North, SC...

Internal and Marginal Fit of Modern Indirect Class II Composite Inlays

Directory of Open Access Journals (Sweden)

Philipp C. Pott

2014-06-01

Full Text Available Introduction: This in vitro study investigates the marginal and internal fit of indirect class II composite restorations. Two different processes for chair-side restorations were compared. In group A, the restorations were fabricated using CAD/CAM technology (Cerec, Sirona, Germany, Bernsheim and in group B they were made by hand (GrandioSO Inlay System, VOCO GmbH, Germany, Cuxhaven. Methods: For a metal tooth with a MOD cavity each 10 restorations were made for groups A and B. For each restoration, a replica of the cement-gap made from light body silicone was produced by placing the restoration into the cavity of the metal tooth. For this purpose, a special restoration-positioning machine was developed. Each replica was sectioned off in the longitudinal axis (L and in the cross axis (C. The thickness of the replicas was measured in both directions, using picture analysis software under a light reflection microscope. To evaluate the fit of the restorations, a special fitting parameter was calculated. Statistical analysis was performed with the t test. Results: The fitting-parameter in group B (L: 97.6µm±73.0µm; C: 71.8µm±46.4µm was significantly lower than that of group A (L: 155.1µm±102.3.0µm; C: 168.2µm±91.9µm (P

Impact of Data Placement on Resilience in Large-Scale Object Storage Systems

Energy Technology Data Exchange (ETDEWEB)

Carns, Philip; Harms, Kevin; Jenkins, John; Mubarak, Misbah; Ross, Robert; Carothers, Christopher

2016-05-02

Distributed object storage architectures have become the de facto standard for high-performance storage in big data, cloud, and HPC computing. Object storage deployments using commodity hardware to reduce costs often employ object replication as a method to achieve data resilience. Repairing object replicas after failure is a daunting task for systems with thousands of servers and billions of objects, however, and it is increasingly difficult to evaluate such scenarios at scale on realworld systems. Resilience and availability are both compromised if objects are not repaired in a timely manner. In this work we leverage a high-fidelity discrete-event simulation model to investigate replica reconstruction on large-scale object storage systems with thousands of servers, billions of objects, and petabytes of data. We evaluate the behavior of CRUSH, a well-known object placement algorithm, and identify configuration scenarios in which aggregate rebuild performance is constrained by object placement policies. After determining the root cause of this bottleneck, we then propose enhancements to CRUSH and the usage policies atop it to enable scalable replica reconstruction. We use these methods to demonstrate a simulated aggregate rebuild rate of 410 GiB/s (within 5% of projected ideal linear scaling) on a 1,024-node commodity storage system. We also uncover an unexpected phenomenon in rebuild performance based on the characteristics of the data stored on the system.

Visualization of nasal airflow patterns in a patient affected with atrophic rhinitis using particle image velocimetry

Energy Technology Data Exchange (ETDEWEB)

Garcia, G J M [Hamner Institutes for Health Sciences, NC (United States); Mitchell, G [The Queens University of Belfast, Belfast (United Kingdom); Bailie, N [The Queens University of Belfast, Belfast (United Kingdom); Thornhill, D [The Queens University of Belfast, Belfast (United Kingdom); Watterson, J [The Queens University of Belfast, Belfast (United Kingdom); Kimbell, J S [Hamner Institutes for Health Sciences, NC (United States)

2007-10-15

The relationship between airflow patterns in the nasal cavity and nasal function is poorly understood. This paper reports an experimental study of the interplay between symptoms and airflow patterns in a patient affected with atrophic rhinitis. This pathology is characterized by mucosal dryness, fetor, progressive atrophy of anatomical structures, a spacious nasal cavity, and a paradoxical sensation of nasal congestion. A physical replica of the patient's nasal geometry was made and particle image velocimetry (PIV) was used to visualize and measure the flow field. The nasal replica was based on computed tomography (CT) scans of the patient and was built in three steps: three-dimensional reconstruction of the CT scans; rapid prototyping of a cast; and sacrificial use of the cast to form a model of the nasal passage in clear silicone. Flow patterns were measured by running a water-glycerol mixture through the replica and evaluating the displacement of particles dispersed in the liquid using PIV. The water-glycerol flow rate used corresponded to an air flow rate representative of a human breathing at rest. The trajectory of the flow observed in the left passage of the nose (more affected by atrophic rhinitis) differed markedly from what is considered normal, and was consistent with patterns of epithelial damage observed in cases of the condition. The data are also useful for validation of computational fluid dynamics predictions.

Shaping of picosecond pulses for pumping optical parametric amplification

International Nuclear Information System (INIS)

Fueloep, J.A.; Krausz, F.; Major, Zs.; Horvath, B.

2006-01-01

Complete test of publication follows. The use of temporally shaped pump pulses for optical parametric amplification (OPA) is expected to facilitate an increase of efficiency and suppression of possible spectral distortions in this process, since the gain sensitively depends on the pump intensity. Our simulations confirmed such beneficial effect of temporally shaped pump pulses on the OPA process. With the aim to realize an optimized OPA stage pumped by shaped pulses, a novel method for passively shaping narrow band picosecond pulses has been developed. The method is based on the pulse-stacking principle, where replicas of the incoming pulse are created in a specially designed four-beam interferometer. The replicas are recombined with appropriate delays. The interferometer design allows for a unique flexibility in varying the pulse shape, since all relevant degrees of freedom, such as relative intensities and delays between the pulse replicas are independently adjustable. According to our calculations a pulse with a flat-top time profile would provide optimal conditions in the OPA process. Usually the pump pulse needs to be amplified in a conventional laser amplifier prior to the OPA. Our cross-correlation measurements showed that we are able to obtain shaped amplified pulses by shaping the amplifier input. Furthermore, by precompensating the distortions introduced by the amplifier we demonstrated our capability to produce amplified pulses with a flat-top time profile.

Applied research for profilometric testing of the state of interior surfaces in heat exchanger tubes

International Nuclear Information System (INIS)

Gyongyosi, Tiberiu; Panaitescu, Valeriu Nicolae

2009-01-01

Generally, the surface flaws identified at heat exchangers tubing are characteristic for the heat secondary systems, located on the external surfaces of the heat exchanger tubes and are mostly the results of the ageing phenomena in systems operation. The tests performed, with the impressing replicating device confirmed the applicability of the technique, functionality of the device and resulted in replicas on metal support, these being the hard copy of the negative of the test tube surface, allowing the profile measurement. The visual inspection of the replicas on the metallic support gives information about the surface geometry replicated, pointing out the marks, which belong to the same area under observation. The minimum and maximum values for the depth of the channel worked out in the inner test tube wall have been determined by profile graphic measurement on the replicas. The paper presents the structural and functional description of the experimental devices. The first results and some conclusions are also included. Two patent applications were submitted at State Office for Inventions and Trademarks (OSIM) covering the original data to protect royalty: 'The local pit flaws, scratches, incipient micro-cracks replicating device on inner cylindrical surfaces', under no. A/00299/17.04.2008 and 'The annular local flaw, incipient micro-cracks replicating device on inner cylindrical surface' under no. A/00300/17.04.2008

Quantifying antimicrobial resistance at veal calf farms.

Directory of Open Access Journals (Sweden)

Angela B Bosman

Full Text Available This study was performed to determine a sampling strategy to quantify the prevalence of antimicrobial resistance on veal calf farms, based on the variation in antimicrobial resistance within and between calves on five farms. Faecal samples from 50 healthy calves (10 calves/farm were collected. From each individual sample and one pooled faecal sample per farm, 90 selected Escherichia coli isolates were tested for their resistance against 25 mg/L amoxicillin, 25 mg/L tetracycline, 0.5 mg/L cefotaxime, 0.125 mg/L ciprofloxacin and 8/152 mg/L trimethoprim/sulfamethoxazole (tmp/s by replica plating. From each faecal sample another 10 selected E. coli isolates were tested for their resistance by broth microdilution as a reference. Logistic regression analysis was performed to compare the odds of testing an isolate resistant between both test methods (replica plating vs. broth microdilution and to evaluate the effect of pooling faecal samples. Bootstrap analysis was used to investigate the precision of the estimated prevalence of resistance to each antimicrobial obtained by several simulated sampling strategies. Replica plating showed similar odds of E. coli isolates tested resistant compared to broth microdilution, except for ciprofloxacin (OR 0.29, p ≤ 0.05. Pooled samples showed in general lower odds of an isolate being resistant compared to individual samples, although these differences were not significant. Bootstrap analysis showed that within each antimicrobial the various compositions of a pooled sample provided consistent estimates for the mean proportion of resistant isolates. Sampling strategies should be based on the variation in resistance among isolates within faecal samples and between faecal samples, which may vary by antimicrobial. In our study, the optimal sampling strategy from the perspective of precision of the estimated levels of resistance and practicality consists of a pooled faecal sample from 20 individual animals, of which

Paraxial light distribution in the focal region of a lens: a comparison of several analytical solutions and a numerical result.

Science.gov (United States)

Wu, Yang; Kelly, Damien P

2014-12-12

The distribution of the complex field in the focal region of a lens is a classical optical diffraction problem. Today, it remains of significant theoretical importance for understanding the properties of imaging systems. In the paraxial regime, it is possible to find analytical solutions in the neighborhood of the focus, when a plane wave is incident on a focusing lens whose finite extent is limited by a circular aperture. For example, in Born and Wolf's treatment of this problem, two different, but mathematically equivalent analytical solutions, are presented that describe the 3D field distribution using infinite sums of [Formula: see text] and [Formula: see text] type Lommel functions. An alternative solution expresses the distribution in terms of Zernike polynomials, and was presented by Nijboer in 1947. More recently, Cao derived an alternative analytical solution by expanding the Fresnel kernel using a Taylor series expansion. In practical calculations, however, only a finite number of terms from these infinite series expansions is actually used to calculate the distribution in the focal region. In this manuscript, we compare and contrast each of these different solutions to a numerically calculated result, paying particular attention to how quickly each solution converges for a range of different spatial locations behind the focusing lens. We also examine the time taken to calculate each of the analytical solutions. The numerical solution is calculated in a polar coordinate system and is semi-analytic. The integration over the angle is solved analytically, while the radial coordinate is sampled with a sampling interval of [Formula: see text] and then numerically integrated. This produces an infinite set of replicas in the diffraction plane, that are located in circular rings centered at the optical axis and each with radii given by [Formula: see text], where [Formula: see text] is the replica order. These circular replicas are shown to be fundamentally

Components of user satisfaction of the Family Health Strategy

Directory of Open Access Journals (Sweden)

Laelson Rochelle Milanês Sousa

2017-09-01

Conclusion: Reliability was the preponderant dimension in the perception of the quality of services and the tested model was validated, making possible its replicas in other empirical contexts and the expansion of its scope.

Cloning

Science.gov (United States)

Cloning describes the processes used to create an exact genetic replica of another cell, tissue or organism. ... named Dolly. There are three different types of cloning: Gene cloning, which creates copies of genes or ...

OAIS and Distributed Digital Preservation in Practice

DEFF Research Database (Denmark)

Zierau, Eld

The aim of the paper is to illustrate how the distributed aspects of digital preservation can be aligned in practice, with the concepts and principles of the Open Archival Information System (OAIS) Reference Model. There has been a growing awareness within the digital preservation community...... of the need for cooperation between organizations to address digital preservation requirements. One common example is that replicas of preservation copies of digital objects need to be independently preserved (e.g., stored, managed, monitored, documented) to ensure that at least one correct replica...... will survive for as long as needed. Such independence can be achieved through distributed digital preservation that relies upon specific agreements between participating and contributing organizations. The OAIS Reference Model does not address the challenges of distributed digital preservation in detail...

Material investigation for manufacturing of reference step gauges for CT scanning verification

DEFF Research Database (Denmark)

Cantatore, Angela; Angel, Jais Andreas Breusch; De Chiffre, Leonardo

2012-01-01

This work deals with the study of stability and material investigation for manufacturing of step gauges for CT scanning verification. Four replica step gauges were fabricated using a bisacryl material for dental applications and the stability over five months was monitored using a tactile CMM....... The material was unstable, probably due to a modification of the chemical composition which lowered the hardness. New step gauges were manufactured through milling. Polyetheretherketone (PEEK) and Polyp-phenylenesulphide (PPS with 40% glass) fulfil the requirements regarding hardness and mechanical properties...... and two series of five step gauges (one series for each material) were manufactured by milling. Results show a significant improvement in terms of form stability and surface geometry quality of the new step gauges with respect to the replica step gauges in Luxabite, as reported below....

Transmit selection for imperfect threshold-based receive MRC in Rayleigh fading channels

KAUST Repository

Radaydeh, Redha Mahmoud Mesleh

2010-01-01

The performance of multiple-antenna diversity systems in which the receiver combines signal replicas per thresholdbased maximal ratio combining (MRC) and the transmitter uses only a single antenna according to receive combined signal strength is studied. The impact of imperfect channel estimation is considered when the received signal replicas undergo independent and flat multipath fading. The analysis is applicable for arbitrary transmit antenna selection when the multiple-antenna channels experience identically distributed and non-identically distributed Rayleigh fading conditions. New closed-form expressions for the combined SNR statistics and some performance measures are presented. The system models adopted herein and the presented analytical results can be used to study the performance of different system architectures under various channel conditions when the implementation complexity is of interest. © 2009 IEEE.

Acousto-optic replication of ultrashort laser pulses

Science.gov (United States)

Yushkov, Konstantin B.; Molchanov, Vladimir Ya.; Ovchinnikov, Andrey V.; Chefonov, Oleg V.

2017-10-01

Precisely controlled sequences of ultrashort laser pulses are required in various scientific and engineering applications. We developed a phase-only acousto-optic pulse shaping method for replication of ultrashort laser pulses in a TW laser system. A sequence of several Fourier-transform-limited pulses is generated from a single femtosecond laser pulse by means of applying a piecewise linear phase modulation over the whole emission spectrum. Analysis demonstrates that the main factor which limits maximum delay between the pulse replicas is spectral resolution of the acousto-optic dispersive delay line used for pulse shaping. In experiments with a Cr:forsterite laser system, we obtained delays from 0.3 to 3.5 ps between two replicas of 190 fs transform-limited pulses at the central wavelength of laser emission, 1230 nm.

Strategic planning toolset for reproduction of machinebuilding engines and equipment

Science.gov (United States)

Boyko, A. A.; Kukartsev, V. V.; Lobkov, K. Y.; Stupina, A. A.

2018-05-01

This article illustrates a replica of a dynamic model of machine-building equipment. The model was designed on the basis of a ‘system dynamics method’ including the Powersim Studio toolset. The given model provides the basis and delineates the reproduction process of equipment in its natural as well as appraisal forms. The presented model was employed as a tool to explore reproduction of a wide range of engines and equipment in machine-building industry. As a result of these experiments, a variety of reproducible options were revealed which include productive capacity and distribution of equipment among technology groups. The authors’ research concludes that the replica of the dynamic model designed by us has proved to be universal. This also opens the way for further research exploring a wide range of industrial equipment reproduction.

Production of entropy on simplified dynamics in spin glass systems

CERN Document Server

Saakyan, D B

2001-01-01

In models of spin glasses one eliminates condition of extreme based on one of the order parameters. On the basis of the available expression for static sum one derived the effective hamiltonian for parameter and the appropriate energy. Relaxation of the system is studied as energy exchange between the degree of freedom related to the order slow parameter and with the rest of the system. At that level one may indicate point of glass capture within phase space on the basis of the static solutions. One studies p-spin model without magnetic field in case of replica symmetry violation. One studies dynamics of p-spin glass in magnetic field in replica-symmetrical phase. One studied model of spins with quadratic interaction when dynamic constants had temperature differing from temperature of space

Laboratory simulation of an oxidative disturbance in a deep granitic environment

International Nuclear Information System (INIS)

Trotignon, L.; Michaud, V.; Lartigue, J.E.

2000-01-01

Granite formations are a potential host environment for a deep nuclear waste repository. Such a repository (typical depth 500 m) will remain open during a period of several years and then be closed to isolate the waste. The chemical stability of the waste and the migration behavior of several radionuclides will depend on the chemistry and circulation of deep groundwaters. Among the critical parameters involved in radionuclide retention processes, the pH and Eh of the groundwaters play a key role. Before site excavation, conditions are usually reducing and slightly alkaline. The intrusion of oxygen due to the opening of galleries modifies the mineral/solution equilibria as well as microbial ecosystems. After several years, radionuclide retention properties along fractures intersecting the galleries will be modified. After site closure, reducing conditions will progressively be restored. To gain a better understanding of processes involved in the reactivity of dissolved oxygen in deep crystalline media, ANDRA (Agence Nationale pour la Gestion des Dechets Redioactifs), SKB (Svensk Karnbranslehantering AB) and JNC (Japan Nuclear Cycle Development Institute) have organized and supported a dedicated project (REX project, for Redox Experiment) including: - an in situ experiment performed in the Aspo Hard Rock Laboratory; a fracture surface isolated in an experimental chamber interacts with water containing variable dissolved O 2 concentrations while physicochemical parameters of the solution are monitored (Royal Institute of Technology, Geosigma); - laboratory studies of the contribution of micro-organisms and fracture minerals to dissolved oxygen uptake (Goteborg, Sheffield and Bradford Universities, British Geological Survey); - construction of a replica of the in situ experiment at Cadarache (CEA, CNRS). The concept of this replica is to reproduce the in situ experiment for its preparation and dimensioning, and also to assess the possibility of finding a link between

Laboratory simulation of an oxidative disturbance in a deep granitic environment; Reconstitution au laboratoire des effets d'une pertubation oxydante en milieu granitique profond

Energy Technology Data Exchange (ETDEWEB)

Trotignon, L; Michaud, V; Lartigue, J E [CEA Saclay, Dept. d' Entreposage et de Stockage des Dechets (DCC/DESD/SESD), 91 - Gif-sur-Yvette (France)

2000-07-01

Granite formations are a potential host environment for a deep nuclear waste repository. Such a repository (typical depth 500 m) will remain open during a period of several years and then be closed to isolate the waste. The chemical stability of the waste and the migration behavior of several radionuclides will depend on the chemistry and circulation of deep groundwaters. Among the critical parameters involved in radionuclide retention processes, the pH and Eh of the groundwaters play a key role. Before site excavation, conditions are usually reducing and slightly alkaline. The intrusion of oxygen due to the opening of galleries modifies the mineral/solution equilibria as well as microbial ecosystems. After several years, radionuclide retention properties along fractures intersecting the galleries will be modified. After site closure, reducing conditions will progressively be restored. To gain a better understanding of processes involved in the reactivity of dissolved oxygen in deep crystalline media, ANDRA (Agence Nationale pour la Gestion des Dechets Redioactifs), SKB (Svensk Karnbranslehantering AB) and JNC (Japan Nuclear Cycle Development Institute) have organized and supported a dedicated project (REX project, for Redox Experiment) including: - an in situ experiment performed in the Aspo Hard Rock Laboratory; a fracture surface isolated in an experimental chamber interacts with water containing variable dissolved O{sub 2} concentrations while physicochemical parameters of the solution are monitored (Royal Institute of Technology, Geosigma); - laboratory studies of the contribution of micro-organisms and fracture minerals to dissolved oxygen uptake (Goteborg, Sheffield and Bradford Universities, British Geological Survey); - construction of a replica of the in situ experiment at Cadarache (CEA, CNRS). The concept of this replica is to reproduce the in situ experiment for its preparation and dimensioning, and also to assess the possibility of finding a link

Minimum detectable differences for cane yield, sucrose content and ...

African Journals Online (AJOL)

guide during the selection process. Genotypes with ... defined experimental variables such as locations, replica- tions and ... is high and well distributed and soils are deep while the ... variable and sometimes shallow and eldana predation is.

Possibilities of RCH-microscopy in the reptilian research

Czech Academy of Sciences Publication Activity Database

Žižka, Zdeněk

2002-01-01

Roč. 51, č. 3 (2002), s. 249-252 ISSN 0139-7893 Institutional research plan: CEZ:AV0Z5020903 Keywords : reptilia * integument * replica Subject RIV: EE - Microbiology, Virology Impact factor: 0.234, year: 2002

A generalized biharmonic equation and its applications to ...

Indian Academy of Sciences (India)

R. Narasimhan (Krishtel eMaging) 1461 1996 Oct 15 13:05:22

analysis and its applications with due credit to intuition as the main source of ... come from an interplay of mathematical theory and experimental ...... exact replica of Howard's semicircle theorem in the context of mathematical statistics while.

Biomechanical comparison of osteosynthesis with poly‑L‑lactic acid ...

African Journals Online (AJOL)

2015-01-21

Jan 21, 2015 ... Fractures of the mandibular condylar process are common fractures affecting the ... mandible replicas are having a medullar and a cortical portion (Synbone ... Based on the biomechanical simulations they performed Neff et al ...

EUSO@TurLab: An experimental replica of ISS orbits

Directory of Open Access Journals (Sweden)

Bertaina M.

2015-01-01

Full Text Available The EUSO@TurLab project is an on-going activity aimed to reproduce atmospheric and luminous conditions that JEM-EUSO will encounter on its orbits around the Earth. The use of the TurLab facility, part of the Department of Physics of the University of Torino, allows the simulation of different surface conditions in a very dark and rotating environment in order to test the response of JEM-EUSO's sensors and sensitivity. The experimental setup currently in operation has been used to check the potential of the TurLab facility for the above purposes, and the acquired data will be used to test the concept of JEM-EUSO's trigger system.

A New Random Walk for Replica Detection in WSNs

Science.gov (United States)

Aalsalem, Mohammed Y.; Saad, N. M.; Hossain, Md. Shohrab; Atiquzzaman, Mohammed; Khan, Muhammad Khurram

2016-01-01

Wireless Sensor Networks (WSNs) are vulnerable to Node Replication attacks or Clone attacks. Among all the existing clone detection protocols in WSNs, RAWL shows the most promising results by employing Simple Random Walk (SRW). More recently, RAND outperforms RAWL by incorporating Network Division with SRW. Both RAND and RAWL have used SRW for random selection of witness nodes which is problematic because of frequently revisiting the previously passed nodes that leads to longer delays, high expenditures of energy with lower probability that witness nodes intersect. To circumvent this problem, we propose to employ a new kind of constrained random walk, namely Single Stage Memory Random Walk and present a distributed technique called SSRWND (Single Stage Memory Random Walk with Network Division). In SSRWND, single stage memory random walk is combined with network division aiming to decrease the communication and memory costs while keeping the detection probability higher. Through intensive simulations it is verified that SSRWND guarantees higher witness node security with moderate communication and memory overheads. SSRWND is expedient for security oriented application fields of WSNs like military and medical. PMID:27409082

“Andere Zeiten, andere Lautgesetze”. Replica a Raffaele Caldarelli

Directory of Open Access Journals (Sweden)

Mario Enrietti

2009-12-01

Full Text Available Mario Enrietti “Andere Zeiten, andere Lautgesetze”. A Reply to Raffaele Caldarelli At first syllables in Slavic become open and then, because of the falling of jers, they go back to be closed again. These are two phenomena which take place in different stages and are not connected to each other.

Processing a Biological Tissue from Cryo-SEM to Replica

Czech Academy of Sciences Publication Activity Database

Vaškovicová, Naděžda; Hrubanová, Kamila; Krzyžánek, Vladislav

2016-01-01

Roč. 22, S3 (2016), s. 236-237 ISSN 1431-9276 R&D Projects: GA MŠk(CZ) LO1212; GA MŠk ED0017/01/01 Institutional support: RVO:68081731 Keywords : Cryo-SEM * ACE600 Subject RIV: JA - Electronics ; Optoelectronics, Electrical Engineering Impact factor: 1.891, year: 2016

A New Random Walk for Replica Detection in WSNs.

Science.gov (United States)

Aalsalem, Mohammed Y; Khan, Wazir Zada; Saad, N M; Hossain, Md Shohrab; Atiquzzaman, Mohammed; Khan, Muhammad Khurram

2016-01-01

Wireless Sensor Networks (WSNs) are vulnerable to Node Replication attacks or Clone attacks. Among all the existing clone detection protocols in WSNs, RAWL shows the most promising results by employing Simple Random Walk (SRW). More recently, RAND outperforms RAWL by incorporating Network Division with SRW. Both RAND and RAWL have used SRW for random selection of witness nodes which is problematic because of frequently revisiting the previously passed nodes that leads to longer delays, high expenditures of energy with lower probability that witness nodes intersect. To circumvent this problem, we propose to employ a new kind of constrained random walk, namely Single Stage Memory Random Walk and present a distributed technique called SSRWND (Single Stage Memory Random Walk with Network Division). In SSRWND, single stage memory random walk is combined with network division aiming to decrease the communication and memory costs while keeping the detection probability higher. Through intensive simulations it is verified that SSRWND guarantees higher witness node security with moderate communication and memory overheads. SSRWND is expedient for security oriented application fields of WSNs like military and medical.

Investigation on the micromilled surface characterization through replica technology

DEFF Research Database (Denmark)

Baruffi, Federico; Parenti, P.; Cacciatore, F.

2016-01-01

for the indirect measurement of micromilled surfaces, characterized by submicrometer roughness levels. The study assesses the performance of the replication method by measuring the surface roughness (in terms of Sa) of specifically designed micromilled flat surfaces. A 3D confocal optical microscope is employed...

Unlearning of Mixed States in the Hopfield Model —Extensive Loading Case—

Science.gov (United States)

Hayashi, Kao; Hashimoto, Chinami; Kimoto, Tomoyuki; Uezu, Tatsuya

2018-05-01

We study the unlearning of mixed states in the Hopfield model for the extensive loading case. Firstly, we focus on case I, where several embedded patterns are correlated with each other, whereas the rest are uncorrelated. Secondly, we study case II, where patterns are divided into clusters in such a way that patterns in any cluster are correlated but those in two different clusters are not correlated. By using the replica method, we derive the saddle point equations for order parameters under the ansatz of replica symmetry. The same equations are also derived by self-consistent signal-to-noise analysis in case I. In both cases I and II, we find that when the correlation between patterns is large, the network loses its ability to retrieve the embedded patterns and, depending on the parameters, a confused memory, which is a mixed state and/or spin glass state, emerges. By unlearning the mixed state, the network acquires the ability to retrieve the embedded patterns again in some parameter regions. We find that to delete the mixed state and to retrieve the embedded patterns, the coefficient of unlearning should be chosen appropriately. We perform Markov chain Monte Carlo simulations and find that the simulation and theoretical results agree reasonably well, except for the spin glass solution in a parameter region due to the replica symmetry breaking. Furthermore, we find that the existence of many correlated clusters reduces the stabilities of both embedded patterns and mixed states.

Fabrication of TiO2/PU Superhydrophobic Film by Nanoparticle Assisted Cast Micromolding Process.

Science.gov (United States)

Li, Jie; Zheng, Jianyong; Zhang, Jing; Feng, Jie

2016-06-01

Lotus-like surfaces have attracted great attentions in recent years for their wide applications in water repellency, anti-fog and self-cleaning. This paper introduced a novel process, nanoparticle assisted cast micromolding, to create polymer film with superhydrophobic surface. Briefly, waterborne polyurethane (WPU) sol and nano TiO2/WPU sol were each cast onto the featured surfaces of the poly(dimethylsiloxane) (PDMS) stamps replicated from fresh lotus leaves. After being dried and peeled off from the stamps, PU and TiO2/WPU replica films were created respectively. To the former, only high hydrophobic property was observed with static water contact angle (WCA) at 142.5 degrees. While to the later, superhydrophobic property was obtained with WCA more than 150 degrees and slide angle less than 3 degrees. Scanning electron microscopy (SEM) imaging showed that the PU replica film only had the micro-papillas and the TiO2/PU replica film not only had micro papillas but also had a large number of nano structures distributed on and between the micro-papillas. Such nano and micro hierarchical structures were very similar with those on the natural lotus leaf surface, thus was the main reason for causing superhydrophobic property. Although an elastic PDMS stamp from lotus leaf was used in herein process, hard molds may also be used in theory. This study supplied an alternative technique for large scale production of polymeric films with superhydrophobic.

Imaging Cytoskeleton Components by Electron Microscopy.

Science.gov (United States)

Svitkina, Tatyana

2016-01-01

The cytoskeleton is a complex of detergent-insoluble components of the cytoplasm playing critical roles in cell motility, shape generation, and mechanical properties of a cell. Fibrillar polymers-actin filaments, microtubules, and intermediate filaments-are major constituents of the cytoskeleton, which constantly change their organization during cellular activities. The actin cytoskeleton is especially polymorphic, as actin filaments can form multiple higher order assemblies performing different functions. Structural information about cytoskeleton organization is critical for understanding its functions and mechanisms underlying various forms of cellular activity. Because of the nanometer-scale thickness of cytoskeletal fibers, electron microscopy (EM) is a key tool to determine the structure of the cytoskeleton. This article describes application of rotary shadowing (or metal replica) EM for visualization of the cytoskeleton. The procedure is applicable to thin cultured cells growing on glass coverslips and consists of detergent extraction of cells to expose their cytoskeleton, chemical fixation to provide stability, ethanol dehydration and critical point drying to preserve three-dimensionality, rotary shadowing with platinum to create contrast, and carbon coating to stabilize replicas. This technique provides easily interpretable three-dimensional images, in which individual cytoskeletal fibers are clearly resolved, and individual proteins can be identified by immunogold labeling. More importantly, replica EM is easily compatible with live cell imaging, so that one can correlate the dynamics of a cell or its components, e.g., expressed fluorescent proteins, with high resolution structural organization of the cytoskeleton in the same cell.

Methods and apparatus for multi-resolution replication of files in a parallel computing system using semantic information

Science.gov (United States)

Faibish, Sorin; Bent, John M.; Tzelnic, Percy; Grider, Gary; Torres, Aaron

2015-10-20

Techniques are provided for storing files in a parallel computing system using different resolutions. A method is provided for storing at least one file generated by a distributed application in a parallel computing system. The file comprises one or more of a complete file and a sub-file. The method comprises the steps of obtaining semantic information related to the file; generating a plurality of replicas of the file with different resolutions based on the semantic information; and storing the file and the plurality of replicas of the file in one or more storage nodes of the parallel computing system. The different resolutions comprise, for example, a variable number of bits and/or a different sub-set of data elements from the file. A plurality of the sub-files can be merged to reproduce the file.

Domestic dogs comprehend human communication with iconic signs.

Science.gov (United States)

Kaminski, Juliane; Tempelmann, Sebastian; Call, Josep; Tomasello, Michael

2009-11-01

A key skill in early human development is the ability to comprehend communicative intentions as expressed in both nonlinguistic gestures and language. In the current studies, we confronted domestic dogs (some of whom knew many human 'words') with a task in which they had to infer the intended referent of a human's communicative act via iconic signs--specifically, replicas and photographs. Both trained and untrained dogs successfully used iconic replicas to fetch the desired item, with many doing so from the first trial. Dogs' ability to use photographs in this same situation was less consistent. Because simple matching to sample in experimental contexts typically takes hundreds of trials (and because similarity between iconic sign and target item did not predict success), we propose that dogs' skillful performance in the current task reflects important aspects of the comprehension of human communicative intentions.

Nondestructive metallographic control for the determination of the degree of sensitivity to intragranular corrosion of austenitic stainless steels; Control metalografico no destructivo para determinar el grado de sensibilidad a la corrosion intergranular de aceros inoxidables austeniticos

Energy Technology Data Exchange (ETDEWEB)

Diaz S, A; Juarez G, F [Instituto Nacional de Investigaciones Nucleares, Mexico City (Mexico)

1994-12-31

The relationship between: microstructure-heat treatment, microstructure-mechanical properties, microstructure-corrosion resistance make that the study of the microstructure of metals and alloys be a powerful tool either in technical-scientific research as in the control of materials. The destructive nature of metallographic analysis create a serious limitation in the case of control methods for failures in the service. The `Tampon` Method make possible the polishing `In situ` of the majority of metals and alloys of industrial use, and the method of nitrocellulose replica allows the obtention of an accurate copy of the metallographic structure which can be observed by transparency or reflection. The purpose of this work is to show in a general way, the fundamental principles of the technique for the obtention of replicas, as well as the countless benefits of its utilization in the national industry. (Author).

Nondestructive metallographic control for the determination of the degree of sensitivity to intragranular corrosion of austenitic stainless steels

International Nuclear Information System (INIS)

Diaz S, A.; Juarez G, F.

1994-01-01

The relationship between: microstructure-heat treatment, microstructure-mechanical properties, microstructure-corrosion resistance make that the study of the microstructure of metals and alloys be a powerful tool either in technical-scientific research as in the control of materials. The destructive nature of metallographic analysis create a serious limitation in the case of control methods for failures in the service. The 'Tampon' Method make possible the polishing 'In situ' of the majority of metals and alloys of industrial use, and the method of nitrocellulose replica allows the obtention of an accurate copy of the metallographic structure which can be observed by transparency or reflection. The purpose of this work is to show in a general way, the fundamental principles of the technique for the obtention of replicas, as well as the countless benefits of its utilization in the national industry. (Author)

NDT: Replication avoids unnecessary replacement of power plant components

International Nuclear Information System (INIS)

Neubauer, B.; Wedel, U.

1984-01-01

Effective fracture prevention for components operating at high temperatures can be achieved without sacrificing useful life. This is done by nondestructive-metallographic examination at crack-susceptible locations of the components. Creep microcracks approximately one micron in size can be detected. RWTUV experience shows that, in general, the components need not be replaced or repaired until these microcracks have grown to form small creep macrocracks. The long prewarning period before macrocracks form provides assurance of safe operation for the full useful life of the components tested. The economic benefit achieved is considerable. Replication techniques have been widely applied by the authors in operating power plants since 1977. This nondestructive-evaluation method involves polishing small areas of selected piping-system components, preparing replicas of the polished areas, and examining the replicas under microscope for evidence of cavities, microcracks, or macrocracks

Light Beam Generation

DEFF Research Database (Denmark)

2007-01-01

The invention relates to a method and a system for synthesizing a set of controllable light beams by provision of a system for synthesizing a set of light beams, comprising a spatially modulated light source for generation of electromagnetic radiation with a set of replicas of a predetermined......(x-xs, y-ys), a Fourier transforming lens for Fourier transforming the electromagnetic radiation, a first spatial light modulator for phase shifting the Fourier transformed electromagnetic radiation with the phase -F(u, v) of S*, S* is the complex conjugate of the Fourier transformed symbol s, a Fourier...... transforming lens for Inverse Fourier transforming the spatially modulated radiation, whereby a set of light beams are formed propagating through the inverse Fourier plane (x', y') at desired positions (x's, y's), and a controller for controlling the position of a replica of the symbol, s, for movement...

Colloidal processing of porous membranes for biogas lighting

International Nuclear Information System (INIS)

Santos, S.C.; Mello-Castanho, S.R.H.

2011-01-01

Nowadays the urban garbage is a great economic and environmental challenge in the whole world. Solid wastes stored in continuous form in landfills are subject of natural variables, transforming them (by bioconversion) in biogas which can be used as energy font in many applications as urban lighting. However, technology to produce it has not been stabilized in Brazil yet. So, in this work porous membranes of rare earth -yttria concentrate (Ctr-Y) with potential to be used as biogas mantles were produced by replica method. The effect of solids and binder concentration on rheological behavior of Ctr-Y suspensions were evaluated by flux curves. According to the results, suspensions with 25vol% and 0,2wt% of CMC showed adequated viscosity and rheological behavior (thixotropy) for replica method. Sintered samples presented the same morphology of template and good handle strength. (author)

Simple multi-party set reconciliation

DEFF Research Database (Denmark)

Mitzenmacher, Michael; Pagh, Rasmus

2017-01-01

Many distributed cloud-based services use multiple loosely consistent replicas of user information to avoid the high overhead of more tightly coupled synchronization. Periodically, the information must be synchronized, or reconciled. One can place this problem in the theoretical framework of...

Pop / Tristan Priimägi

Index Scriptorium Estoniae

Priimägi, Tristan, 1976-

2008-01-01

Heliplaatidest: Elbow "The Seldom Seen Kid", Lahesõda "Dermocracy", Nits "Doing The Dishes", Nine Inch Nails "Ghosts I-IV", The Last Shadow Puppets "The Age Of The Understatement", The Shortwave Set "Replica Sun Machine", Def Leppard "Songs From The Sparkle Lounge"

Growth on solid media.

Science.gov (United States)

Elbing, Karen; Brent, Roger

2002-08-01

Detailed protocols are provided for titering and isolating bacterial colonies by serial dilutions, or alternatively by streaking or spreading a plate. Support protocols describe replica plating as well as methods for storing strains as agar stabs or frozen glycerol stocks.

A Statistical Mechanics Approach to Approximate Analytical Bootstrap Averages

DEFF Research Database (Denmark)

Malzahn, Dorthe; Opper, Manfred

2003-01-01

We apply the replica method of Statistical Physics combined with a variational method to the approximate analytical computation of bootstrap averages for estimating the generalization error. We demonstrate our approach on regression with Gaussian processes and compare our results with averages...

Synthesis of zeolite-templated carbons for hydrogen storage applications

CSIR Research Space (South Africa)

Musyoka, Nicholas M

2013-10-01

Full Text Available in this field. Of the various nanocasting strategies for carbonaceous materials, hard templates such as zeolites have been of key research interest due to the many attractive properties associated with the resulting carbon replicas. Some of these properties are...

ITFoM - The IT Future of Medicine

NARCIS (Netherlands)

Lehrach, H.; Subrak, R.; Boyle, P.; Pasterk, M.; Zatloukal, K.; Muller, H.; Hubbard, T.; Brand, A.; Girolami, M.; Jameson, D.; Bruggeman, F.J.; Westerhoff, H.V.

2011-01-01

Molecular medicine is undergoing a revolution, creating a data fog that may obscure understanding. The functioning human is analogous to a biological factory controlled by an incredibly complex Information and Communication (IC) network. It is proposed that 7 billion computational replicas be made

Minimizing scattering from antireflective surfaces replicated from low-aspect-ratio black silicon

DEFF Research Database (Denmark)

Christiansen, Alexander Bruun; Clausen, Jeppe; Mortensen, N. Asger

2012-01-01

The scattering properties of randomly structured antireflective black silicon polymer replica have been investigated. Using a two-step casting process, the structures can be replicated in Ormocomp on areas of up to 3 in. in diameter. Fourier analysis of scanning electron microscopy images...

Hydrogen silsesquioxane mold coatings for improved replication of nanopatterns by injection molding

DEFF Research Database (Denmark)

Hobæk, Thor Christian; Matschuk, Maria; Kafka, Jan

2015-01-01

of replication, thus allowing more time to fill the nanoscale cavities compared to standard metal molds. A monolayer of a fluorinated silane (heptadecafluorotrichlorosilane) deposited on the mold surface reduces the mold/polymer interfacial energy to support demolding of the polymer replica. The mechanical...

Specific functions of the Rep and Rep' proteins of porcine circovirus during copy-release and rolling-circle DNA replication

Science.gov (United States)

The roles of two porcine circovirus replication initiator proteins, Rep and Rep', in generating copy-release and rolling-circle DNA replication intermediates were determined. Rep uses the supercoiled closed-circular genome (ccc) to initiate leading-strand synthesis (identical to copy-release replica...

Optimal capacity of Ashkin-Teller neural networks

International Nuclear Information System (INIS)

Kozleowski, P.; Bolle, D.

2001-01-01

The maximal capacity per number of couplings is calculated for Ashkin-Teller type neural networks using a replica-symmetric Gardner approach. The results are compared with numerical simulations. The best value obtained at κ=0 is α c =2.26±0.01

Vocal caricatures reveal signatures of speaker identity

Science.gov (United States)

López, Sabrina; Riera, Pablo; Assaneo, María Florencia; Eguía, Manuel; Sigman, Mariano; Trevisan, Marcos A.

2013-12-01

What are the features that impersonators select to elicit a speaker's identity? We built a voice database of public figures (targets) and imitations produced by professional impersonators. They produced one imitation based on their memory of the target (caricature) and another one after listening to the target audio (replica). A set of naive participants then judged identity and similarity of pairs of voices. Identity was better evoked by the caricatures and replicas were perceived to be closer to the targets in terms of voice similarity. We used this data to map relevant acoustic dimensions for each task. Our results indicate that speaker identity is mainly associated with vocal tract features, while perception of voice similarity is related to vocal folds parameters. We therefore show the way in which acoustic caricatures emphasize identity features at the cost of loosing similarity, which allows drawing an analogy with caricatures in the visual space.

Emission and structure varieties in ZnO:Ag nanorods obtained by ultrasonic spray pyrolysis

International Nuclear Information System (INIS)

Lozada, E Velázquez; Torchynska, T V; Espinola, J L Casas

2014-01-01

Scanning electronic microscopy (SEM), X ray diffraction (XRD) and photoluminescence (PL) have been applied to the study of the structural and optical properties of ZnO nanocrystals prepared by the ultrasonic spray pyrolysis (USP) at different temperatures. The variation of temperatures and times at the growth of ZnO films permits modifying the ZnO phase from the amorphous to crystalline, to change the size of ZnO nanocrystals (NCs), as well as to vary their photoluminescence spectra. The study has revealed three types of PL bands in ZnO NCs: defect related emission, the near-band-edge (NBE) PL, related to the LO phonon replica of free exciton (FE) recombination, and FE second-order diffraction peaks. The PL bands related to the LO phonon replica of FE in PL spectra measured at room temperature testify on the high quality of ZnO films prepared by the USP technology.

Statistical Physics, Optimization, Inference, and Message-Passing Algorithms : Lecture Notes of the Les Houches School of Physics : Special Issue, October 2013

CERN Document Server

Ricci-Tersenghi, Federico; Zdeborova, Lenka; Zecchina, Riccardo; Tramel, Eric W; Cugliandolo, Leticia F

2015-01-01

This book contains a collection of the presentations that were given in October 2013 at the Les Houches Autumn School on statistical physics, optimization, inference, and message-passing algorithms. In the last decade, there has been increasing convergence of interest and methods between theoretical physics and fields as diverse as probability, machine learning, optimization, and inference problems. In particular, much theoretical and applied work in statistical physics and computer science has relied on the use of message-passing algorithms and their connection to the statistical physics of glasses and spin glasses. For example, both the replica and cavity methods have led to recent advances in compressed sensing, sparse estimation, and random constraint satisfaction, to name a few. This book’s detailed pedagogical lectures on statistical inference, computational complexity, the replica and cavity methods, and belief propagation are aimed particularly at PhD students, post-docs, and young researchers desir...

Optical properties of ion-implanted InP and GaAs: Selectivity-excited photoluminescence spectra

International Nuclear Information System (INIS)

Makita, Yunosuke; Yamada, Akimasa; Kimura, Shinji; Niki, Shigeru; Yoshinaga, Hiroshi; Matsumori, Tokue; Iida, Tsutomu; Uekusa, Ichiro

1993-01-01

Implantation of Mg+ ions was carried out into high purity InP grown by liquid encapsulated Czochralski method. Mg+ ion-implanted InP presented the formation of plural novel emissions with increasing Mg concentration, [Mg] in the low temperature photoluminescence spectra. Selectively-excited photoluminescence (SPL) measurements were made to examine the features of two-hole replicas pertinent to the emissions of excitons bound to neutral Mg and residual Zn acceptors. Systematic variation of the emission intensities from the two types of two-hole replicas was found to be utilized for the evaluation of ion-implanted materials. The significant discrepancy of emission spectra between PL and SPL was attributed to the difference of the depth examined by using the excitation light with high and low absorption coefficient. The results revealed that the diffusion of ion-implanted Mg is extremely enhanced when [Mg] exceeds 1x10 17 cm -3

C3PO - A dynamic data placement agent for ATLAS distributed data management

CERN Document Server

AUTHOR|(INSPIRE)INSPIRE-00346910; The ATLAS collaboration; Lassnig, Mario; Barisits, Martin-Stefan; Serfon, Cedric; Garonne, Vincent

2017-01-01

This paper introduces a new dynamic data placement agent for the ATLAS distributed data management system. This agent is designed to pre-place potentially popular data to make it more widely available. It therefore incorporates information from a variety of sources. Those include input datasets and sites workload information from the ATLAS workload management system, network metrics from different sources like FTS and PerfSonar, historical popularity data collected through a tracer mechanism and more. With this data it decides if, when and where to place new replicas that then can be used by the WMS to distribute the workload more evenly over available computing resources and then ultimately reduce job waiting times. This paper gives an overview of the architecture and the final implementation of this new agent. The paper also includes an evaluation of the placement algorithm by comparing the transfer times and the new replica usage.

Comprehensive MALDI-TOF biotyping of the non-redundant Harvard Pseudomonas aeruginosa PA14 transposon insertion mutant library.

Science.gov (United States)

Oumeraci, Tonio; Jensen, Vanessa; Talbot, Steven R; Hofmann, Winfried; Kostrzewa, Markus; Schlegelberger, Brigitte; von Neuhoff, Nils; Häussler, Susanne

2015-01-01

Pseudomonas aeruginosa is a gram-negative bacterium that is ubiquitously present in the aerobic biosphere. As an antibiotic-resistant facultative pathogen, it is a major cause of hospital-acquired infections. Its rapid and accurate identification is crucial in clinical and therapeutic environments. In a large-scale MALDI-TOF mass spectrometry-based screen of the Harvard transposon insertion mutant library of P. aeruginosa strain PA14, intact-cell proteome profile spectra of 5547 PA14 transposon mutants exhibiting a plethora of different phenotypes were acquired and analyzed. Of all P. aeruginosa PA14 mutant profiles 99.7% were correctly identified as P. aeruginosa with the Biotyper software on the species level. On the strain level, 99.99% of the profiles were mapped to five different individual P. aeruginosa Biotyper database entries. A principal component analysis-based approach was used to determine the most important discriminatory mass features between these Biotyper groups. Although technical replicas were consistently categorized to specific Biotyper groups in 94.2% of the mutant profiles, biological replicas were not, indicating that the distinct proteotypes are affected by growth conditions. The PA14 mutant profile collection presented here constitutes the largest coherent P. aeruginosa MALDI-TOF spectral dataset publicly available today. Transposon insertions in thousands of different P. aeruginosa genes did not affect species identification from MALDI-TOF mass spectra, clearly demonstrating the robustness of the approach. However, the assignment of the individual spectra to sub-groups proved to be non-consistent in biological replicas, indicating that the differentiation between biotyper groups in this nosocomial pathogen is unassured.

Life Management of high energy piping girth welds

International Nuclear Information System (INIS)

Cohn, M.J.; Paterson, S.R.

1994-01-01

Life management of high energy piping systems is a synergistic process that combines the collective results from nondestructive examination (NDE), stress analysis, metallurgical replication, and fracture mechanics evaluations. To achieve conclusions with high confidence and reliability, the methodology requires that: (1) all weldments must be appropriately examined to establish initial baseline data and indicate both fabrication and inservice damage, (2) as-found stress analyses must be consistent with field estimated displacements to select sites of maximum in-service damage, and (3) metallurgical replicas must be taken at high stress sites determined as an outcome of a life exhaustion evaluation. The multidiscipline tasks are effectively managed by developing a rational framework incorporating all of the above requirements. Analytical algorithms that estimate linear and nonlinear degradation effects are included in the remaining life predictions. High damage locations are selected based on a life exhaustion calculation. Localized remaining life and reexamination intervals for failures governed by creep and fatigue damage are estimated by metallurgical replica cavitation damage and the service life. Stress-based creep damage identified in metallurgical replicas should correspond to the predicted high damage locations from the life exhaustion calculation. The methodology minimizes future reexamination locations while providing high certainty of monitoring lead-the-fleet damage. This life management program recognizes the aging process in plant equipment. It establishes a continuous process of examinations, evaluations, and decisions to track degradation of the piping system life cycle. Potential problems are identified long before failures occur. Corrective action is taken during scheduled outages to maintain the required level of plant performance

Free Energy Reconstruction from Logarithmic Mean-Force Dynamics Using Multiple Nonequilibrium Trajectories.

Science.gov (United States)

Morishita, Tetsuya; Yonezawa, Yasushige; Ito, Atsushi M

2017-07-11

Efficient and reliable estimation of the mean force (MF), the derivatives of the free energy with respect to a set of collective variables (CVs), has been a challenging problem because free energy differences are often computed by integrating the MF. Among various methods for computing free energy differences, logarithmic mean-force dynamics (LogMFD) [ Morishita et al., Phys. Rev. E 2012 , 85 , 066702 ] invokes the conservation law in classical mechanics to integrate the MF, which allows us to estimate the free energy profile along the CVs on-the-fly. Here, we present a method called parallel dynamics, which improves the estimation of the MF by employing multiple replicas of the system and is straightforwardly incorporated in LogMFD or a related method. In the parallel dynamics, the MF is evaluated by a nonequilibrium path-ensemble using the multiple replicas based on the Crooks-Jarzynski nonequilibrium work relation. Thanks to the Crooks relation, realizing full-equilibrium states is no longer mandatory for estimating the MF. Additionally, sampling in the hidden subspace orthogonal to the CV space is highly improved with appropriate weights for each metastable state (if any), which is hardly achievable by typical free energy computational methods. We illustrate how to implement parallel dynamics by combining it with LogMFD, which we call logarithmic parallel dynamics (LogPD). Biosystems of alanine dipeptide and adenylate kinase in explicit water are employed as benchmark systems to which LogPD is applied to demonstrate the effect of multiple replicas on the accuracy and efficiency in estimating the free energy profiles using parallel dynamics.

Disorders of "taste cognition" are associated with insular involvement in patients with Alzheimer's disease and vascular dementia: "memory of food is impaired in dementia and responsible for poor diet".

Science.gov (United States)

Suto, Teiko; Meguro, Kenichi; Nakatsuka, Masahiro; Kato, Yuriko; Tezuka, Kimihiro; Yamaguchi, Satoshi; Tashiro, Manabu

2014-07-01

In dementia patients, dietary intake problems may occur despite the absence of swallowing problems. We investigated cognitive functions on food and taste in Alzheimer's disease (AD) and vascular dementia (VaD) patients. Participants included 15 healthy controls (HC), 30 AD and 20 VaD patients. Food Cognition Test: Replicas of three popular foods in Japan with no odors were presented visually to each participant, with the instruction to respond with the name of each food. Replicas of food materials were subsequently presented to ask whether they were included in these foods. Taste Cognition Test: Replicas of 12 kinds of foods were presented to describe their expected tastes. The AD/VaD groups exhibited significantly lower scores on Food/Taste Cognition Tests compared with the HC group. These scores correlated inversely with Mini-Mental State Examination (MMSE) scores in the AD group. Decreased dietary intake was observed in 12 of the 50 patients; 8 of the 12 exhibited decreased Taste Cognition Test scores, higher than that of the normal-intake patients. There was no difference in the filter paper taste disc test between HC/AD/VaD groups. To test the hypothesis that the insula is associated with taste cognition, two MMSE-matched AD subgroups (n = 10 vs. 10) underwent positron emission tomography. Glucose metabolism in the right insula was lower in the low taste cognition subgroup. The VaD patients with insular lesions exhibited impaired Taste Cognition Test findings. It is important to consider the cognitive aspect of dietary intake when we care for dementia patients.

Effect of sequence and stereochemistry reversal on p53 peptide mimicry.

Directory of Open Access Journals (Sweden)

Alessio Atzori

Full Text Available Peptidomimetics effective in modulating protein-protein interactions and resistant to proteolysis have potential in therapeutic applications. An appealing yet underperforming peptidomimetic strategy is to employ D-amino acids and reversed sequences to mimic a lead peptide conformation, either separately or as the combined retro-inverso peptide. In this work, we examine the conformations of inverse, reverse and retro-inverso peptides of p53(15-29 using implicit solvent molecular dynamics simulation and circular dichroism spectroscopy. In order to obtain converged ensembles for the peptides, we find enhanced sampling is required via the replica exchange molecular dynamics method. From these replica exchange simulations, the D-peptide analogues of p53(15-29 result in a predominantly left-handed helical conformation. When the parent sequence is reversed sequence as either the L-peptide and D-peptide, these peptides display a greater helical propensity, feature reflected by NMR and CD studies in TFE/water solvent. The simulations also indicate that, while approximately similar orientations of the side-chains are possible by the peptide analogues, their ability to mimic the parent peptide is severely compromised by backbone orientation (for D-amino acids and side-chain orientation (for reversed sequences. A retro-inverso peptide is disadvantaged as a mimic in both aspects, and further chemical modification is required to enable this concept to be used fruitfully in peptidomimetic design. The replica exchange molecular simulation approach adopted here, with its ability to provide detailed conformational insights into modified peptides, has potential as a tool to guide structure-based design of new improved peptidomimetics.

Grid Enabled Geospatial Catalogue Web Service

Science.gov (United States)

Chen, Ai-Jun; Di, Li-Ping; Wei, Ya-Xing; Liu, Yang; Bui, Yu-Qi; Hu, Chau-Min; Mehrotra, Piyush

2004-01-01

Geospatial Catalogue Web Service is a vital service for sharing and interoperating volumes of distributed heterogeneous geospatial resources, such as data, services, applications, and their replicas over the web. Based on the Grid technology and the Open Geospatial Consortium (0GC) s Catalogue Service - Web Information Model, this paper proposes a new information model for Geospatial Catalogue Web Service, named as GCWS which can securely provides Grid-based publishing, managing and querying geospatial data and services, and the transparent access to the replica data and related services under the Grid environment. This information model integrates the information model of the Grid Replica Location Service (RLS)/Monitoring & Discovery Service (MDS) with the information model of OGC Catalogue Service (CSW), and refers to the geospatial data metadata standards from IS0 19115, FGDC and NASA EOS Core System and service metadata standards from IS0 191 19 to extend itself for expressing geospatial resources. Using GCWS, any valid geospatial user, who belongs to an authorized Virtual Organization (VO), can securely publish and manage geospatial resources, especially query on-demand data in the virtual community and get back it through the data-related services which provide functions such as subsetting, reformatting, reprojection etc. This work facilitates the geospatial resources sharing and interoperating under the Grid environment, and implements geospatial resources Grid enabled and Grid technologies geospatial enabled. It 2!so makes researcher to focus on science, 2nd not cn issues with computing ability, data locztic, processir,g and management. GCWS also is a key component for workflow-based virtual geospatial data producing.

A study of an adaptive replication framework for orchestrated composite web services.

Science.gov (United States)

Mohamed, Marwa F; Elyamany, Hany F; Nassar, Hamed M

2013-01-01

Replication is considered one of the most important techniques to improve the Quality of Services (QoS) of published Web Services. It has achieved impressive success in managing resource sharing and usage in order to moderate the energy consumed in IT environments. For a robust and successful replication process, attention should be paid to suitable time as well as the constraints and capabilities in which the process runs. The replication process is time-consuming since outsourcing some new replicas into other hosts is lengthy. Furthermore, nowadays, most of the business processes that might be implemented over the Web are composed of multiple Web services working together in two main styles: Orchestration and Choreography. Accomplishing a replication over such business processes is another challenge due to the complexity and flexibility involved. In this paper, we present an adaptive replication framework for regular and orchestrated composite Web services. The suggested framework includes a number of components for detecting unexpected and unhappy events that might occur when consuming the original published web services including failure or overloading. It also includes a specific replication controller to manage the replication process and select the best host that would encapsulate a new replica. In addition, it includes a component for predicting the incoming load in order to decrease the time needed for outsourcing new replicas, enhancing the performance greatly. A simulation environment has been created to measure the performance of the suggested framework. The results indicate that adaptive replication with prediction scenario is the best option for enhancing the performance of the replication process in an online business environment.

Operator product expansion in Liouville field theory and Seiberg-type transitions in log-correlated random energy models

Science.gov (United States)

Cao, Xiangyu; Le Doussal, Pierre; Rosso, Alberto; Santachiara, Raoul

2018-04-01

We study transitions in log-correlated random energy models (logREMs) that are related to the violation of a Seiberg bound in Liouville field theory (LFT): the binding transition and the termination point transition (a.k.a., pre-freezing). By means of LFT-logREM mapping, replica symmetry breaking and traveling-wave equation techniques, we unify both transitions in a two-parameter diagram, which describes the free-energy large deviations of logREMs with a deterministic background log potential, or equivalently, the joint moments of the free energy and Gibbs measure in logREMs without background potential. Under the LFT-logREM mapping, the transitions correspond to the competition of discrete and continuous terms in a four-point correlation function. Our results provide a statistical interpretation of a peculiar nonlocality of the operator product expansion in LFT. The results are rederived by a traveling-wave equation calculation, which shows that the features of LFT responsible for the transitions are reproduced in a simple model of diffusion with absorption. We examine also the problem by a replica symmetry breaking analysis. It complements the previous methods and reveals a rich large deviation structure of the free energy of logREMs with a deterministic background log potential. Many results are verified in the integrable circular logREM, by a replica-Coulomb gas integral approach. The related problem of common length (overlap) distribution is also considered. We provide a traveling-wave equation derivation of the LFT predictions announced in a precedent work.

Knights in White Sneakers.

Science.gov (United States)

Raggio, Susan; Zjawin, Dorothy

1982-01-01

A teaching unit to help students explore daily life during the Middle Ages is presented. Techniques for teaching about the medieval social structure, feudal rights and objectives, living arrangements, agricultural practices, and suggestions for building a replica of a medieval village are included. (PP)

Injection molding of nanopatterned surfaces in the sub-micrometer range with induction heating aid

DEFF Research Database (Denmark)

Menotti, Stefano; Hansen, Hans Nørgaard; Bissacco, Giuliano

2014-01-01

. A tool insert having a surface containing functional geometries in the sub-micrometer range was produced using aluminum anodization and nickel electroplating. In order to provide elevated mold temperatures necessary for the complete replica of the pattern, a new mold setup was developed, which allows...

la letteratura insegue la scienza. una prospettiva settecentesca

African Journals Online (AJOL)

User

Élémens de la philosophie de Newton di Voltaire (1738) si leggono nell'edizione critica della. Voltaire ... critica e di filosofia, trattati d'ogni tipo, tra i quali è da segnalare ... lunga replica del padre Jean François Baltus, della Compagnia di.

Two-way quantum communication: Generalization of secure ...

Indian Academy of Sciences (India)

states among the n nodes of a quantum network, with the aid of a special kind of ... replica of the information state, i.e., this process has one-way quantum ... with respect to increase in the number of qubits going towards the controller Charlie.

Effective Monte Carlo scheme for multicomponent gas adsorption and enantioselectivity in nanoporous materials

NARCIS (Netherlands)

van Erp, T.S.; Dubbeldam, D.; Caremans, T.P.; Calero, S.; Martens, J.A.

2010-01-01

We devise an efficient Monte Carlo scheme to study the adsorption of a multicomponent gas in a nanoporous material. The configurational bias move is extended by a novel replica exchange procedure where the configurations of the different simulations describing one particular gas content are being

Mean-field solution of the Potts glass near the transition temperature to the ordered phase

Czech Academy of Sciences Publication Activity Database

Janiš, Václav; Klíč, Antonín

2011-01-01

Roč. 84, č. 6 (2011), "064446-1"-"064446-10" ISSN 1098-0121 Institutional research plan: CEZ:AV0Z10100520 Keywords : Potts glass * hierarchic solutions with replicated spins * continuous replica-symmetry breaking Subject RIV: BE - Theoretical Physics Impact factor: 3.691, year: 2011

Characterization of European Lacquers by Terahertz (THz) Reflectometric Imaging

DEFF Research Database (Denmark)

Dandolo, Corinna Ludovica Koch; Jepsen, Peter Uhd; Christensen, Mads C.

2013-01-01

In this study a European lacquerware replica has been investigated by terahertz (THz) reflectometric imaging. The inspected lacquerware is a wooden panel covered by multiple complex layers of lacquers and plaster. Utilizing pulsed Terahertz Time-Domain Imaging (THz-TDI) in reflection mode, we obs...

European Science Notes. Volume 39, Number 7.

Science.gov (United States)

1985-07-01

using acids and caustic sol - Several investigators in Switzer- vents, the cleaned replica is then land and in Germany are involved in placed on a...Institutes bases of drugs, prediction and observa- National institute for Astronomy and Geophysics tion of volcanic eruptions, oceano - National Institute

Custom magazines: where digital page-turn editions fail

NARCIS (Netherlands)

Schijns, J.M.C.; Smit, E.G.

2010-01-01

Threatened by the rise in paper, printing and postage costs, online custom magazines rejoice an increased interest. They are seen as a more efficient, but equivalent alternative to offline custom magazines. Most digital custom magazines, however, contain an electronic replica of the print version.

Fast prototyping of injection molded polymer microfluidic chips

DEFF Research Database (Denmark)

Hansen, Thomas Steen; Selmeczi, David; Larsen, Niels Bent

2010-01-01

We present fast prototyping of injection molding tools by the definition of microfluidic structures in a light-curable epoxy (SU-8) directly on planar nickel mold inserts. Optimized prototype mold structures could withstand injection molding of more than 300 replicas in cyclic olefin copolymer (COC...

RF Metamaterials for Foliage Penetration (FOPEN) Application

Science.gov (United States)

2013-02-01

Approved for public release; distribution unlimited FOREWORD The Lockheed Martin Aeronautics Company (LMA) Advanced Development Program (the “ Skunk ...customized adapter plate with matching attachments to the positioner. The C-130 Shadow Harvest sensor pod replica is designed by LMA and fabricated at a

Biomechanical comparison of transoral and transbuccal lateral ...

African Journals Online (AJOL)

Objectives: The purpose of this experimental study was to compare the biomechanical behaviors of two different types of osteosynthesis that are used in the treatment of mandibular angle fractures. Materials and Methods: Twenty synthetic polyurethane human mandible replicas, with medullar and cortical portions, were ...

Strong Carrier-Phonon Coupling in Lead Halide Perovskite Nanocrystals

NARCIS (Netherlands)

Iaru, Claudiu M; Geuchies, Jaco J|info:eu-repo/dai/nl/370526090; Koenraad, Paul M; Vanmaekelbergh, Daniël|info:eu-repo/dai/nl/304829137; Silov, Andrei Yu

2017-01-01

We highlight the importance of carrier-phonon coupling in inorganic lead halide perovskite nanocrystals. The low-temperature photoluminescence (PL) spectrum of CsPbBr3 has been investigated under a nonresonant and a nonstandard, quasi-resonant excitation scheme, and phonon replicas of the main PL

Molecular Dynamics Simulations of Nucleic Acids. From Tetranucleotides to the Ribosome

Czech Academy of Sciences Publication Activity Database

Šponer, Jiří; Banáš, P.; Jurečka, P.; Zgarbová, M.; Kührová, P.; Havrila, Marek; Krepl, Miroslav; Stadlbauer, Petr; Otyepka, M.

2014-01-01

Roč. 5, č. 10 (2014), s. 1771-1782 ISSN 1948-7185 R&D Projects: GA ČR(CZ) GAP208/12/1878 Institutional support: RVO:68081707 Keywords : DELTA-VIRUS RIBOZYME * AMBER FORCE-FIELD * REPLICA-EXCHANGE METHOD Subject RIV: BO - Biophysics Impact factor: 7.458, year: 2014

Verification of a CT scanner using a miniature step gauge

DEFF Research Database (Denmark)

Cantatore, Angela; Andreasen, J.L.; Carmignato, S.

2011-01-01

The work deals with performance verification of a CT scanner using a 42mm miniature replica step gauge developed for optical scanner verification. Errors quantification and optimization of CT system set-up in terms of resolution and measurement accuracy are fundamental for use of CT scanning...

Instantaneous nonvertical electronic transitions with shaped femtosecond laser pulses: Is it possible?

DEFF Research Database (Denmark)

Henriksen, Niels Engholm; Møller, Klaus Braagaard

2003-01-01

In molecular electronic transitions, a vertical transition can be induced by an ultrashort laser pulse. That is, a replica of the initial nuclear state-times the transition dipole moment of the electronic transition-can be created instantaneously (on the time scale of nuclear motion) in the excited...

The decay of a false vacuum and the density of states in a random, repulsive potential

International Nuclear Information System (INIS)

Neuberger, H.

1982-01-01

The replica method is applied to a disordered system built out of randomly distributed, purely repulsive scattering centers. The emerging field theoretical model has a classical solution, a bounce, which gives both the leading form of the level density and the typical ground-state wave function. (orig.)

Benchtop Nanoscale Patterning Using Soft Lithography

Science.gov (United States)

Meenakshi, Viswanathan; Babayan, Yelizaveta; Odom, Teri W.

2007-01-01

This paper outlines several benchtop nanoscale patterning experiments that can be incorporated into undergraduate laboratories or advanced high school chemistry curricula. The experiments, supplemented by an online video lab manual, are based on soft lithographic techniques such as replica molding, micro-molding in capillaries, and micro-contact…

Sampling the equilibrium kinetic network of Trp-cage in explicit solvent

NARCIS (Netherlands)

Du, W.; Bolhuis, P.G.

2014-01-01

We employed the single replica multiple state transition interface sampling (MSTIS) approach to sample the kinetic (un) folding network of Trp-cage mini-protein in explicit water. Cluster analysis yielded 14 important metastable states in the network. The MSTIS simulation thus resulted in a full 14

Growth in liquid or solid media.

Science.gov (United States)

Elbing, K L; Brent, R

2001-05-01

This appendix presents basic procedures for growing overnight (and larger) cultures, monitoring growth, and titering and isolating bacterial cultures by serial dilution. In addition, protocols are provided for isolating single colonies by streaking and spreading a plate. Replica plating and strain storage/retrieval is also detailed.

Integrated X-ray testing of the electro-optical breadboard model for the XMM reflection grating spectrometer

Energy Technology Data Exchange (ETDEWEB)

Bixler, J.V.; Craig, W.; Decker, T. [Lawrence Livermore National Lab., CA (United States); Aarts, H.; Boggende, T. den; Brinkman, A.C. [Space Research Organization Netherlands, Utrecht (Netherlands); Burkert, W.; Brauninger, H. [Max-Planck Institute fur Extraterrestische Physik, Testanlage (Germany); Branduardi-Raymont, G. [Univ. College London (United Kingdom); Dubbeldam, L. [Space Research Organization Netherlands, Leiden (Netherlands)] [and others

1994-07-12

X-ray calibration of the Electro-Optical Breadboard Model (EOBB) of the XXM Reflection Grating Spectrometer has been carried out at the Panter test facility in Germany. The EOBB prototype optics consisted of a four-shell grazing incidence mirror module followed by an array of eight reflection gratings. The dispersed x-rays were detected by an array of three CCDs. Line profile and efficiency measurements where made at several energies, orders, and geometric configurations for individual gratings and for the grating array as a whole. The x-ray measurements verified that the grating mounting method would meet the stringent tolerances necessary for the flight instrument. Post EOBB metrology of the individual gratings and their mountings confirmed the precision of the grating boxes fabrication. Examination of the individual grating surface`s at micron resolution revealed the cause of anomalously wide line profiles to be scattering due to the crazing of the replica`s surface.

Quantum Effects in Inverse Opal Structures

Science.gov (United States)

Bleiweiss, Michael; Datta, Timir; Lungu, Anca; Yin, Ming; Iqbal, Zafar; Palm, Eric; Brandt, Bruce

2002-03-01

Properties of bismuth inverse opals and carbon opal replicas were studied. The bismuth nanostructures were fabricated by pressure infiltration into porous artificial opal, while the carbon opal replicas were created via CVD. These structures form a regular three-dimensional network in which the bismuth and carbon regions percolate in all directions between the close packed spheres of SiO_2. The sizes of the conducting regions are of the order of tens of nanometers. Static susceptibility of the bismuth inverse opal showed clear deHaas-vanAlphen oscillations. Transport measurements, including Hall, were done using standard ac four and six probe techniques in fields up to 17 T* and temperatures between 4.2 and 200 K. Observations of Shubnikov-deHaas oscillations in magnetoresistance, one-dimensional weak localization, quantum Hall and other effects will be discussed. *Performed at the National High Magnetic Field Lab (NHMFL) FSU, Tallahassee, FL. This work was partially supported by grants from DARPA-nanothermoelectrics, NASA-EPSCOR and the USC nanocenter.

Precipitation behavior in austenitic and ferritic steels during fast neutron irradiation and thermal aging

International Nuclear Information System (INIS)

Kawanishi, H.; Hajima, R.; Sekimura, N.; Arai, Y.; Ishino, S.

1988-01-01

Precipitation behavior has been studied using a carbon extraction replica technique in Ti-modified Type 316 stainless steels (JPCA-2) and 9Cr-2Mo ferritic/martensitic steels (JFMS) irradiated to 8.1x10 24 n/m 2 at 873 and 673 K, respectively, in the experimental fast breeder reactor JOYO. Precipitate identification and compositional analysis were carried out on extracted replicas. The results were compared to those from the as-received steel and a control which had been given the same thermal as-treatment as the specimens received during irradiations. Carbides, Ti-sulphides and phosphides were precipitated in JPCA-2. Precipitate observed in JFMS included carbides, Laves-phases and phosphides. The precipitates in both steels were concluded to be stable under irradiation except for MC and M 6 C in JPCA-2. Small MC particles were found precipitated in JPCA-2 during both irradiation and aging. Irradiation proved to promote the precipitation of M 6 C in JPCA-2. (orig.)

Efficient Hybrid Detection of Node Replication Attacks in Mobile Sensor Networks

Directory of Open Access Journals (Sweden)

Ze Wang

2017-01-01

Full Text Available The node replication attack is one of the notorious attacks that can be easily launched by adversaries in wireless sensor networks. A lot of literatures have studied mitigating the node replication attack in static wireless sensor networks. However, it is more difficult to detect the replicas in mobile sensor networks because of their node mobility. Considering the limitations of centralized detection schemes for static wireless sensor networks, a few distributed solutions have been recently proposed. Some existing schemes identified replicated attacks by sensing mobile nodes with identical ID but different locations. To facilitate the discovery of contradictory conflicts, we propose a hybrid local and global detection method. The local detection is performed in a local area smaller than the whole deployed area to improve the meeting probability of contradictory nodes, while the distant replicated nodes in larger area can also be efficiently detected by the global detection. The complementary two levels of detection achieve quick discovery by searching of the replicas with reasonable overhead.

Precipitation behavior in austenitic and ferritic steels during fast neutron irradiation and thermal aging*1

Science.gov (United States)

Kawanishi, H.; Hajima, R.; Sekimura, N.; Arai, Y.; Ishino, S.

1988-07-01

Precipitation behavior has been studied using a carbon extraction replica technique in Ti-modified Type 316 stainless steels (JPCA-2) and 9Cr-2Mo ferritic/martensitic steels (JFMS) irradiated to 8.1 × 10 24 n/m 2 at 873 and 673 K, respectively, in the experimental fast breeder reactor JOYO. Precipitate identification and compositional analysis were carried out on extracted replicas. The results were compared to those from the as-received steel and a control which had been given the same thermal as-treatment as the specimens received during irradiations. Carbides, Ti-sulphides and phosphides were precipitated in JPCA-2. Precipitate observed in JFMS included carbides, Laves-phases and phosphides. The precipitates in both steels were concluded to be stable under irradiation except for MC and M 6C in JPCA-2. Small MC particles were found precipitated in JPCA-2 during both irradiation and aging. Irradiation proved to promote the precipitation of M 6C in JPCA-2.

C3PO - A Dynamic Data Placement Agent for ATLAS Distributed Data Management

CERN Document Server

Beermann, Thomas; The ATLAS collaboration; Barisits, Martin-Stefan; Serfon, Cedric; Garonne, Vincent

2016-01-01

This contribution introduces a new dynamic data placement agent for the ATLAS distributed data management system. This agent is designed to pre-place potentially popular data to make it more widely available. It uses data from a variety of sources. Those include input datasets and sites workload information from the ATLAS workload management system, network metrics from different sources like FTS and PerfSonar, historical popularity data collected through a tracer mechanism and more. With this data it decides if, when and where to place new replicas that then can be used by the WMS to distribute the workload more evenly over available computing resources and then ultimately reduce job waiting times. The new replicas are created with a short lifetime that gets extended, when the data is accessed and therefore the system behaves like a big cache. This paper gives an overview of the architecture and the final implementation of this new agent. The paper also includes an evaluation of different placement algorithm...

Increasing the sampling efficiency of protein conformational transition using velocity-scaling optimized hybrid explicit/implicit solvent REMD simulation

Energy Technology Data Exchange (ETDEWEB)

Yu, Yuqi; Wang, Jinan; Shao, Qiang, E-mail: qshao@mail.shcnc.ac.cn, E-mail: Jiye.Shi@ucb.com, E-mail: wlzhu@mail.shcnc.ac.cn; Zhu, Weiliang, E-mail: qshao@mail.shcnc.ac.cn, E-mail: Jiye.Shi@ucb.com, E-mail: wlzhu@mail.shcnc.ac.cn [ACS Key Laboratory of Receptor Research, Drug Discovery and Design Center, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, 555 Zuchongzhi Road, Shanghai 201203 (China); Shi, Jiye, E-mail: qshao@mail.shcnc.ac.cn, E-mail: Jiye.Shi@ucb.com, E-mail: wlzhu@mail.shcnc.ac.cn [UCB Pharma, 216 Bath Road, Slough SL1 4EN (United Kingdom)

2015-03-28

The application of temperature replica exchange molecular dynamics (REMD) simulation on protein motion is limited by its huge requirement of computational resource, particularly when explicit solvent model is implemented. In the previous study, we developed a velocity-scaling optimized hybrid explicit/implicit solvent REMD method with the hope to reduce the temperature (replica) number on the premise of maintaining high sampling efficiency. In this study, we utilized this method to characterize and energetically identify the conformational transition pathway of a protein model, the N-terminal domain of calmodulin. In comparison to the standard explicit solvent REMD simulation, the hybrid REMD is much less computationally expensive but, meanwhile, gives accurate evaluation of the structural and thermodynamic properties of the conformational transition which are in well agreement with the standard REMD simulation. Therefore, the hybrid REMD could highly increase the computational efficiency and thus expand the application of REMD simulation to larger-size protein systems.

Ontological Constraints in Children's Inductive Inferences: Evidence From a Comparison of Inferences Within Animals and Vehicles.

Science.gov (United States)

Tarlowski, Andrzej

2018-01-01

There is a lively debate concerning the role of conceptual and perceptual information in young children's inductive inferences. While most studies focus on the role of basic level categories in induction the present research contributes to the debate by asking whether children's inductions are guided by ontological constraints. Two studies use a novel inductive paradigm to test whether young children have an expectation that all animals share internal commonalities that do not extend to perceptually similar inanimates. The results show that children make category-consistent responses when asked to project an internal feature from an animal to either a dissimilar animal or a similar toy replica. However, the children do not have a universal preference for category-consistent responses in an analogous task involving vehicles and vehicle toy replicas. The results also show the role of context and individual factors in inferences. Children's early reliance on ontological commitments in induction cannot be explained by perceptual similarity or by children's sensitivity to the authenticity of objects.

LHCb experience with LFC replication

CERN Document Server

Bonifazi, F; Perez, E D; D'Apice, A; dell'Agnello, L; Düllmann, D; Girone, M; Re, G L; Martelli, B; Peco, G; Ricci, P P; Sapunenko, V; Vagnoni, V; Vitlacil, D

2008-01-01

Database replication is a key topic in the framework of the LHC Computing Grid to allow processing of data in a distributed environment. In particular, the LHCb computing model relies on the LHC File Catalog, i.e. a database which stores information about files spread across the GRID, their logical names and the physical locations of all the replicas. The LHCb computing model requires the LFC to be replicated at Tier-1s. The LCG 3D project deals with the database replication issue and provides a replication service based on Oracle Streams technology. This paper describes the deployment of the LHC File Catalog replication to the INFN National Center for Telematics and Informatics (CNAF) and to other LHCb Tier-1 sites. We performed stress tests designed to evaluate any delay in the propagation of the streams and the scalability of the system. The tests show the robustness of the replica implementation with performance going much beyond the LHCb requirements.

Phytoliths as Emerging Taxonomic Tools for Identification of Plants: An Overview

Directory of Open Access Journals (Sweden)

Sheikh Abdul Shakoor

2014-01-01

Full Text Available In the recent advancements in identification of plant species, phytoliths have found an immense role in the identification of plants at different levels of taxonomic hierarchy. Many plant groups are known to accumulate silica in solid form in and between the cells and tissues and hence create the structures commonly known as phytoliths. These phytoliths create replicas of the structures where they are deposited. The shapes of phytolith replicas, their size dimensions (morphometric parameters, surface features (ornamentation, distribution, and orientation pattern in epidermal layers of vegetative and reproductive structures as well as their frequency are highly important for characterization of species. Monocotyledonous families particularly the family Poaceae (Gramineae are known to produce diverse phytolith types that can serve as diagnostic markers for characterization of different taxa at different levels of taxonomic hierarchy. The present paper highlights the importance of phytoliths in taxonomic analysis of plants particularly in the family Poaceae.

Disk storage management for LHCb based on Data Popularity estimator

Science.gov (United States)

Hushchyn, Mikhail; Charpentier, Philippe; Ustyuzhanin, Andrey

2015-12-01

This paper presents an algorithm providing recommendations for optimizing the LHCb data storage. The LHCb data storage system is a hybrid system. All datasets are kept as archives on magnetic tapes. The most popular datasets are kept on disks. The algorithm takes the dataset usage history and metadata (size, type, configuration etc.) to generate a recommendation report. This article presents how we use machine learning algorithms to predict future data popularity. Using these predictions it is possible to estimate which datasets should be removed from disk. We use regression algorithms and time series analysis to find the optimal number of replicas for datasets that are kept on disk. Based on the data popularity and the number of replicas optimization, the algorithm minimizes a loss function to find the optimal data distribution. The loss function represents all requirements for data distribution in the data storage system. We demonstrate how our algorithm helps to save disk space and to reduce waiting times for jobs using this data.

Disk storage management for LHCb based on Data Popularity estimator

CERN Document Server

INSPIRE-00545541; Charpentier, Philippe; Ustyuzhanin, Andrey

2015-12-23

This paper presents an algorithm providing recommendations for optimizing the LHCb data storage. The LHCb data storage system is a hybrid system. All datasets are kept as archives on magnetic tapes. The most popular datasets are kept on disks. The algorithm takes the dataset usage history and metadata (size, type, configuration etc.) to generate a recommendation report. This article presents how we use machine learning algorithms to predict future data popularity. Using these predictions it is possible to estimate which datasets should be removed from disk. We use regression algorithms and time series analysis to find the optimal number of replicas for datasets that are kept on disk. Based on the data popularity and the number of replicas optimization, the algorithm minimizes a loss function to find the optimal data distribution. The loss function represents all requirements for data distribution in the data storage system. We demonstrate how our algorithm helps to save disk space and to reduce waiting times ...

Characterization of low density carbon foams by x-ray computed tomography (CT) and ion microtomography (IMF)

International Nuclear Information System (INIS)

Moddeman, W.E.; Kramer, D.P.; Firsich, D.W.; Trainer, P.D.; Yancy, R.N.; Weirup, D.L.; Logan, C.M.; Pontau, A.E.; Antolak, A.J.; Morse, D.H.

1990-01-01

Two NDT techniques were used to characterize low-density, microcellular, carbon foams fabricated from a salt replica process. In this paper the two techniques are x-ray computed tomography (CT) and ion microtomography (IMT); data are presented on carbon foams that contain high-density regions. The data show that densities which differ by 3 ) materials. The data reveal that the carbon foams produced by this replica process have small density variations; the density being ∼30% greater at the outer edges than when compared to the interior of the foam. In addition, the density gradient is found to be rather sharp, that is the density drops-off rapidly from the outer edges to a uniform one in the interior of the foam. This edge build-up in carbon density was explained in terms of polymer concentrating on the foam exterior during drying which immediately followed a polymer infusion processing step. Supporting analytical data from other techniques show the foam material to be >88.8% carbon

Disk storage management for LHCb based on Data Popularity estimator

International Nuclear Information System (INIS)

Hushchyn, Mikhail; Charpentier, Philippe; Ustyuzhanin, Andrey

2015-01-01

This paper presents an algorithm providing recommendations for optimizing the LHCb data storage. The LHCb data storage system is a hybrid system. All datasets are kept as archives on magnetic tapes. The most popular datasets are kept on disks. The algorithm takes the dataset usage history and metadata (size, type, configuration etc.) to generate a recommendation report. This article presents how we use machine learning algorithms to predict future data popularity. Using these predictions it is possible to estimate which datasets should be removed from disk. We use regression algorithms and time series analysis to find the optimal number of replicas for datasets that are kept on disk. Based on the data popularity and the number of replicas optimization, the algorithm minimizes a loss function to find the optimal data distribution. The loss function represents all requirements for data distribution in the data storage system. We demonstrate how our algorithm helps to save disk space and to reduce waiting times for jobs using this data. (paper)

The reproducibility and accuracy of internal fit of Cerec 3D CAD/CAM all ceramic crowns.

LENUS (Irish Health Repository)

D'Arcy, Brian L

2009-06-01

The objective of this study was to evaluate the reproducibility and accuracy of internal fit using Cerec 3D CAD\\/CAM (computer aided design\\/computer aided manufacturing) all-ceramic crowns and to investigate the proximal contact point areas between the crowns and neighbouring teeth, in terms of location and the presence or absence of contact. A total of 48 crowns were milled and divided into two groups of twenty-four each. One group consisted of testing a Control die and the other group consisted of testing single Replica stone die duplicates of the Control die. The Internal Marginal Gap, Axio-Occlusal Transition Gap and Occlusal Gap were measured on each crown in both groups. No significant differences were identified between the mean thickness of the Marginal Gap, the Axio-Occlusal Transition Gap and the Occlusal Gap of the Control die when compared with the Replica dies indicating uniformity and consistency of the accuracy of fit and therefore die replication.

LHCb experience with LFC replication

International Nuclear Information System (INIS)

Bonifazi, F; Carbone, A; D'Apice, A; Dell'Agnello, L; Re, G L; Martelli, B; Ricci, P P; Sapunenko, V; Vitlacil, D; Perez, E D; Duellmann, D; Girone, M; Peco, G; Vagnoni, V

2008-01-01

Database replication is a key topic in the framework of the LHC Computing Grid to allow processing of data in a distributed environment. In particular, the LHCb computing model relies on the LHC File Catalog, i.e. a database which stores information about files spread across the GRID, their logical names and the physical locations of all the replicas. The LHCb computing model requires the LFC to be replicated at Tier-1s. The LCG 3D project deals with the database replication issue and provides a replication service based on Oracle Streams technology. This paper describes the deployment of the LHC File Catalog replication to the INFN National Center for Telematics and Informatics (CNAF) and to other LHCb Tier-1 sites. We performed stress tests designed to evaluate any delay in the propagation of the streams and the scalability of the system. The tests show the robustness of the replica implementation with performance going much beyond the LHCb requirements

Study of Monte Carlo approach to experimental uncertainty propagation with MSTW 2008 PDFs

CERN Document Server

Watt, G.

2012-01-01

We investigate the Monte Carlo approach to propagation of experimental uncertainties within the context of the established 'MSTW 2008' global analysis of parton distribution functions (PDFs) of the proton at next-to-leading order in the strong coupling. We show that the Monte Carlo approach using replicas of the original data gives PDF uncertainties in good agreement with the usual Hessian approach using the standard Delta(chi^2) = 1 criterion, then we explore potential parameterisation bias by increasing the number of free parameters, concluding that any parameterisation bias is likely to be small, with the exception of the valence-quark distributions at low momentum fractions x. We motivate the need for a larger tolerance, Delta(chi^2) > 1, by making fits to restricted data sets and idealised consistent or inconsistent pseudodata. Instead of using data replicas, we alternatively produce PDF sets randomly distributed according to the covariance matrix of fit parameters including appropriate tolerance values,...

Fog collecting biomimetic surfaces: Influence of microstructure and wettability.

Science.gov (United States)

Azad, M A K; Ellerbrok, D; Barthlott, W; Koch, K

2015-01-19

We analyzed the fog collection efficiency of three different sets of samples: replica (with and without microstructures), copper wire (smooth and microgrooved) and polyolefin mesh (hydrophilic, superhydrophilic and hydrophobic). The collection efficiency of the samples was compared in each set separately to investigate the influence of microstructures and/or the wettability of the surfaces on fog collection. Based on the controlled experimental conditions chosen here large differences in the efficiency were found. We found that microstructured plant replica samples collected 2-3 times higher amounts of water than that of unstructured (smooth) samples. Copper wire samples showed similar results. Moreover, microgrooved wires had a faster dripping of water droplets than that of smooth wires. The superhydrophilic mesh tested here was proved more efficient than any other mesh samples with different wettability. The amount of collected fog by superhydrophilic mesh was about 5 times higher than that of hydrophilic (untreated) mesh and was about 2 times higher than that of hydrophobic mesh.

Sampling the Denatured State of Polypeptides in Water, Urea, and Guanidine Chloride to Strict Equilibrium Conditions with the Help of Massively Parallel Computers.

Science.gov (United States)

Meloni, Roberto; Camilloni, Carlo; Tiana, Guido

2014-02-11

The denatured state of polypeptides and proteins, stabilized by chemical denaturants like urea and guanidine chloride, displays residual secondary structure when studied by nuclear-magnetic-resonance spectroscopy. However, these experimental techniques are weakly sensitive, and thus molecular-dynamics simulations can be useful to complement the experimental findings. To sample the denatured state, we made use of massively-parallel computers and of a variant of the replica exchange algorithm, in which the different branches, connected with unbiased replicas, favor the formation and disruption of local secondary structure. The algorithm is applied to the second hairpin of GB1 in water, in urea, and in guanidine chloride. We show with the help of different criteria that the simulations converge to equilibrium. It results that urea and guanidine chloride, besides inducing some polyproline-II structure, have different effect on the hairpin. Urea disrupts completely the native region and stabilizes a state which resembles a random coil, while guanidine chloride has a milder effect.

Reducing consistency in human realism increases the uncanny valley effect; increasing category uncertainty does not.

Science.gov (United States)

MacDorman, Karl F; Chattopadhyay, Debaleena

2016-01-01

Human replicas may elicit unintended cold, eerie feelings in viewers, an effect known as the uncanny valley. Masahiro Mori, who proposed the effect in 1970, attributed it to inconsistencies in the replica's realism with some of its features perceived as human and others as nonhuman. This study aims to determine whether reducing realism consistency in visual features increases the uncanny valley effect. In three rounds of experiments, 548 participants categorized and rated humans, animals, and objects that varied from computer animated to real. Two sets of features were manipulated to reduce realism consistency. (For humans, the sets were eyes-eyelashes-mouth and skin-nose-eyebrows.) Reducing realism consistency caused humans and animals, but not objects, to appear eerier and colder. However, the predictions of a competing theory, proposed by Ernst Jentsch in 1906, were not supported: The most ambiguous representations-those eliciting the greatest category uncertainty-were neither the eeriest nor the coldest. Copyright © 2015 The Authors. Published by Elsevier B.V. All rights reserved.

Foundations and latest advances in replica exchange transition interface sampling

NARCIS (Netherlands)

Cabriolu, R.; Refsnes, K.M.S; Bolhuis, P.G.; van Erp, T.S.

2017-01-01

Nearly 20 years ago, transition path sampling (TPS) emerged as an alternative method to free energy based approaches for the study of rare events such as nucleation, protein folding, chemical reactions, and phase transitions. TPS effectively performs Monte Carlo simulations with relatively short

Accounting for PDMS shrinkage when replicating structures

DEFF Research Database (Denmark)

Madsen, Morten Hannibal; Feidenhans'l, Nikolaj Agentoft; Hansen, Poul-Erik

2014-01-01

are seldom applied to counteract the shrinkage of PDMS. Also, to perform metrological measurements using replica techniques one has to take the shrinkage into account. Thus we report a study of the shrinkage of PDMS with several different mixing ratios and curing temperatures. The shrinkage factor, with its...

The Effect of Prolactin on the Number of Membrane-Associated Particles in Kidney Cells of the Euryhaline Teleost Gasterosteus aculeatus during Transfer from Seawater to Freshwater : A Freeze-Etch Study

NARCIS (Netherlands)

Wendelaar Bonga, S.E.; Veenhuis, M.

1974-01-01

The membranes of kidney cells of 3-spined sticklebacks were examined in freeze-etch replicas. The numbers of particles adhering to surfaces and fracture faces of the outer cell membranes and the membranes of the basal labyrinth were determined. The latter membranes probably are the main location of

Journal of Biosciences | Indian Academy of Sciences

Indian Academy of Sciences (India)

Replica-moulded polydimethylsiloxane culture vessel lids attenuate osmotic drift in long-term cell cultures · Axel Blau Tanja Neumann Christiane Ziegler Fabio Benfenati ... otherwise conventional cell culture conditions. pp 71-83 Articles. Molecular evolution of the E8 promoter in tomato and some of its relative wild species.

A Laboratory Exercise Illustrating the Sensitivity and Specificity of Western Blot Analysis

Science.gov (United States)

Chang, Ming-Mei; Lovett, Janice

2011-01-01

Western blot analysis, commonly known as "Western blotting," is a standard tool in every laboratory where proteins are analyzed. It involves the separation of polypeptides in polyacrylamide gels followed by the electrophoretic transfer of the separated polypeptides onto a nitrocellulose or polyvinylidene fluoride membrane. A replica of the…

Equilibrium state of the mean-field Potts glass

Czech Academy of Sciences Publication Activity Database

Janiš, Václav; Klíč, Antonín

2011-01-01

Roč. 23, č. 2 (2011), s. 1-5 ISSN 0953-8984 Institutional research plan: CEZ:AV0Z10100520 Keywords : Potts glass * replica-symmetry breaking * asymptotic expansion Subject RIV: BE - Theoretical Physics Impact factor: 2.546, year: 2011 http://iopscience.iop.org/0953-8984/23/2/022204/

Infinite number of pure equilibrium states, Parisi order parameter and the ultrametric topology: a simple mean field model

International Nuclear Information System (INIS)

Cassandro, M.; Olivieri, E.; Picco, P.

1984-10-01

We discuss and solve by standard method a simple model with long range random interaction. In this model we can rigorously define and explicitly work out many peculiar features already found in the Sherrington-Kirpatrick model only by means of replica symmetry breaking and/or via numerical simulations

Wideband CMOS low noise amplifier including an active balun

NARCIS (Netherlands)

Blaakmeer, S.C.; Klumperink, Eric A.M.; Leenaerts, D.M.W.; Nauta, Bram

2007-01-01

An inductorless LNA with active balun is proposed for multi-standard radio applications between 100MHz and 6GHz [1]. It exploits a combination of a common-gate (CG) stage and an common-source (CS) stage with replica biasing to maximize balanced operation, while simultaneously canceling the noise and

Wideband Balun-LNA with Simultaneous Output Balancing, Noise-Canceling and Distortion-Canceling

NARCIS (Netherlands)

Blaakmeer, S.C.; Klumperink, Eric A.M.; Leenaerts, D.M.W.; Nauta, Bram

2008-01-01

An inductorless low-noise amplifier (LNA) with active balun is proposed for multi-standard radio applications between 100 MHz and 6 GHz. It exploits a combination of a common-gate (CGH) stage and an admittance-scaled common-source (CS) stage with replica biasing to maximize balanced operation, while

Author Details

African Journals Online (AJOL)

Goud, MJP. Vol 2, No 3 (2007) - Articles Antibacterial activity and biomolecular composition of certain fresh water micro-algae from River Godavari (India) Abstract PDF · Vol 3, No 1 (2008) - Articles Replica plate screening method for detecting phosphatase activity in basidiomycetes using 1-Napthyl Phosphate as a ...

The Legs That Rock the Cradle

Indian Academy of Sciences (India)

The 113 families of spiders, so far described throughout the world, exhibit a wide range of ... A spider may lay all its eggs in a single sac or make several sacs over a period of time in one .... exact replicas of their parents. But their true colours ...

Glassy transition in a disordered model for the RNA secondary structure

International Nuclear Information System (INIS)

Pagnani, A.; Parisi, G.; Ricci-Tersenghi, F.

2000-04-01

We numerically study a disordered model for the RNA secondary structure and we find that it undergoes a phase transition, with a breaking of the replica symmetry in the low temperature region (like in spin glasses). Our results are based on the exact evaluation of the partition function. (author)

Torque resistance of impression copings after direct implant impression: An in vitro evaluation of impression materials with and without adhesive.

Science.gov (United States)

Auroy, Pascal; Nicolas, Emanuel; Bedouin, Yvan

2017-01-01

No data are available on the ability of an impression coping to resist the manual placement of an abutment replica (implant analog) during prosthodontic laboratory procedures after a direct (pick-up) impression. The purpose of this in vitro study was to evaluate the torque resistance of impression copings after a direct impression, that is, the amount of rotational torque sufficient to induce irreversible displacement of impression copings in the impression material bulk once the impression has been made. A reference model with 5 abutment replicas was constructed. Five impression copings were screwed onto the abutment replicas, and standardized impressions were made. A controlled twisting force was applied to each impression coping. A torque tester recorded the torque variation. Three elastomeric impression materials were tested. ANOVA and the Tukey test (α=.05) were performed using an average of 30 measurements per impression material, with and without adhesive. ANOVA and the Tukey test results showed that the adhesive, cohesive, and mechanical bonds between the impression coping and the impression material depended greatly on the type of material and that the average rupture threshold of these bonds was statistically significantly different in pairwise comparisons (Ptorque. The polyether impression material is the direct impression material that showed the highest breakdown threshold for adhesive bonding when used without an adhesive. The use of an adhesive on impression copings leads to irreversible deformation of the interface at torque stresses well below the adhesive bond threshold of the same materials used without an adhesive. Copyright © 2016 Editorial Council for the Journal of Prosthetic Dentistry. Published by Elsevier Inc. All rights reserved.

Accuracy of implant impressions without impression copings: a three-dimensional analysis.

Science.gov (United States)

Kwon, Joo-Hyun; Son, Yong-Ha; Han, Chong-Hyun; Kim, Sunjai

2011-06-01

Implant impressions without impression copings can be used for cement-retained implant restorations. A comparison of the accuracy of implant impressions with and without impression copings is needed. The purpose of this study was to evaluate and compare the dimensional accuracy of implant definitive casts that are fabricated by implant impressions with and without impression copings. An acrylic resin maxillary model was fabricated, and 3 implant replicas were secured in the right second premolar, first, and second molars. Two impression techniques were used to fabricate definitive casts (n=10). For the coping group (Group C), open tray impression copings were used for the final impressions. For the no-coping group (Group NC), cementable abutments were connected to the implant replicas, and final impressions were made assuming the abutments were prepared teeth. Computerized calculation of the centroids and long axes of the implant or stone abutment replicas was performed. The Mann-Whitney U test analyzed the amount of linear and rotational distortion between groups (α =.05). At the first molar site, Group NC showed significantly greater linear distortion along the Y-axis, with a small difference between the groups (Group C, 7.8 ± 7.4 μm; Group NC, 19.5 ± 12.2). At the second molar site, increased distortion was noted in Group NC for every linear and rotational variable, except for linear distortion along the Z-axis. Implant impression with open tray impression copings produced more accurate definitive casts than those fabricated without impression copings, especially those with greater inter-abutment distance. Copyright © 2011 The Editorial Council of the Journal of Prosthetic Dentistry. Published by Mosby, Inc. All rights reserved.

O2 depletion in granitic media. The Rex project

International Nuclear Information System (INIS)

Puigdomenech, I.; Ambrosi, J.P.; Eisenlohr, L.; Lartigue, J.E.; Banwart, S.A.; Bateman, K.; Milodowski, A.E.; West, J.M.; Griffault, L.; Gustafsson, E.; Hama, K.; Yoshida, H.; Michaud, V.; Trotignon, L.; Rivas Perez, J.; Tullborg, E.L.

2001-02-01

The redox conditions are of consequence for the performance of nuclear repositories. The presence of molecular oxygen (O 2 ) would affect the corrosion of canisters and the migration of radionuclides eventually released from a damaged canister. The rate of disappearance of O 2 left in voids at repository closure is therefore an important information when evaluating repository designs. The REX project (Redox Experiment in Detailed Scale) has been carried out within the frame of SKB Aespoe Hard Rock Laboratory in Sweden. The aim was to determine how O 2 trapped in the closed repository would react with the rock minerals in the tunnel and deposition holes and in the water conducting fractures. The REX project consisted of the following sections: Field investigations at Aespoe: Microbial O 2 consumption at several sites in the Aespoe tunnel. The in situ experiment: Injection of oxygen and monitoring of O 2 uptake in a confined fracture surface. The Replica Experiment: a laboratory study using the other half of the fracture surface used for the in situ experiment. Laboratory experiments: needed to support the interpretation of the field and replica experiments. Conducted with groundwaters, bacteria, and mineral samples from Aespoe. The results from the in-situ experiment were confirmed by those of the replica experiment performed in the CEA laboratory in France. Both were concordant in showing time scales for O 2 uptake in the order of days. The agreement was remarkable when taking into account the differences in experimental conditions. For example, different microbial processes took place in the two experiments. Laboratory studies with rock samples demonstrated that microbial activity induced increased chemical weathering, with the formation of clay minerals. Rates of O 2 uptake by fracture filling minerals were determined under laboratory conditions. These rates were faster than those reported in literature studies of pure mineral systems, and supported the fast O 2

76 FR 21944 - Petition for Waiver of Compliance

Science.gov (United States)

2011-04-19

... which a replica constructed in 1979, from the same blueprints and tooling is owned and operated by the National Park Service at Promontory Summit, Utah. The Leviathan is constructed to educate the public... Safety Appliance Standards (Sec. 231.15 (b) and (d), Steam locomotives used in road service-- Pilot sill...

Characterization Of The Advanced Radiographic Capability Front End On NIF

International Nuclear Information System (INIS)

Haefner, C.; Heebner, J.; Dawson, J.; Fochs, S.; Shverdin, M.; Crane, J.K.; Kanz, V.K.; Halpin, J.; Phan, H.; Sigurdsson, R.; Brewer, W.; Britten, J.; Brunton, G.; Clark, W.; Messerly, M.J.; Nissen, J.D.; Nguyen, H.; Shaw, B.; Hackel, R.; Hermann, M.; Tietbohl, G.; Siders, C.W.; Barty, C.J.

2009-01-01

We have characterized the Advanced Radiographic Capability injection laser system and demonstrated that it meets performance requirements for upcoming National Ignition Facility fusion experiments. Pulse compression was achieved with a scaled down replica of the meter-scale grating ARC compressor and sub-ps pulse duration was demonstrated at the Joule-level

Use of the SSLP-based method for detection of rare apomictic events in a sexual AtSERK1 transgenic Arabidopsis population

NARCIS (Netherlands)

Kantama, L.; Lambert, J.M.; Hu, H.; Jong, de H.; Vries, de S.C.; Russinova, E.

2006-01-01

Here we present a screening method to evaluate the potential of genes to transfer aspects of apomixis into sexual crop plants. Based on the assumption that an apomictic progeny is an exact genetic replica of the mother plant we employed a set of single sequence length polymorphism (SSLP) markers to

Development, Implementation, and Analysis of Desktop-Scale Model Industrial Equipment and a Critical Thinking Rubric for Use in Chemical Engineering Education

Science.gov (United States)

Golter, Paul B.

2011-01-01

In order to address some of the challenges facing engineering education, namely the demand that students be better prepared to practice professional as well as technical skills, we have developed an intervention consisting of equipment, assessments and a novel pedagogy. The equipment consists of desktop-scale replicas of common industrial…

A fractographic distinction between hydride cracking and stress corrosion cracking in zircaloys

International Nuclear Information System (INIS)

Cox, B.

1978-06-01

The fractographic details of SCC and delayed hydride failures are compared by scanning and replica electron microscopy. It is shown that there are distinct features ascribable to the fracture of hydride platelets which are absent from SCC fractures and which distinguish them from fractures produced by delayed hydride cracking. (author)

Template-mediated, Hierarchical Engineering of Ordered Mesoporous Films and Powders

Science.gov (United States)

Tian, Zheng

Hierarchical control over pore size, pore topology, and meso/mictrostructure as well as material morphology (e.g., powders, monoliths, thin films) is crucial for meeting diverse materials needs among applications spanning next generation catalysts, sensors, batteries, sorbents, etc. The overarching goal of this thesis is to establish fundamental mechanistic insight enabling new strategies for realizing such hierarchical textural control for carbon materials that is not currently achievable with sacrificial pore formation by 'one-pot' surfactant-based 'soft'-templating or multi-step inorganic 'hard-templating. While 'hard'-templating is often tacitly discounted based upon its perceived complexity, it offers potential for overcoming key 'soft'-templating challenges, including bolstering pore stability, accommodating a more versatile palette of replica precursors, realizing ordered/spanning porosity in the case of porous thin films, simplifying formation of bi-continuous pore topologies, and inducing microstructure control within porous replica materials. In this thesis, we establish strategies for hard-templating of hierarchically porous and structured carbon powders and tunable thin films by both multi-step hard-templating and a new 'one-pot' template-replica precursor co-assembly process. We first develop a nominal hard-templating technique to successfully prepare three-dimensionally ordered mesoporous (3DOm) and 3DOm-supported microporous carbon thin films by exploiting our ability to synthesize and assemble size-tunable silica nanoparticles into scalable, colloidal crystalline thin film templates of tunable mono- to multi-layer thickness. This robust thin film template accommodates liquid and/or vapor-phase infiltration, polymerization, and pyrolysis of various carbon sources without pore contraction and/or collapse upon template sacrifice. The result is robust, flexible 3DOm or 3DOm-supported ultra-thin microporous films that can be transferred by stamp

77 FR 13624 - Notice of Intent To Repatriate Cultural Items: U.S. Fish and Wildlife Service, Office of Law...

Science.gov (United States)

2012-03-07

... Service is not responsible for the determinations in this notice. History and Description of the Cultural...; Items 7 and 12: eagle bone whistle; Item 15: dance club; Item 16: dance staff; Items 23-25: replica... feather headdress; Item 65: medicine bundle; and Item 69: leather tipi bag and contents. Item 16 (dance...

Comparison of Marginal and Internal Adaptation of Heat-Pressed and CAD/CAM Porcelain Laminate Veneers and a 2-Year Follow-Up.

Science.gov (United States)

Yuce, Mert; Ulusoy, Mubin; Turk, Ayse Gozde

2017-12-22

To compare marginal and internal adaptations of porcelain laminate veneers fabricated with heat-pressed and CAD/CAM techniques, and to evaluate the clinical performances 2 years after cementation. Thirty heat-pressed and 31 CAD/CAM porcelain laminate veneers were fabricated for 12 patients. Silicone replicas of each veneer were obtained. Replicas were sectioned into 4 parts to measure adaptations of the veneers. A stereomicroscope was used to measure from 3 locations of replicas for marginal, and 9 locations for internal adaptations at 40x magnification. Clinical evaluations were done at baseline and 6, 12, 18, and 24 months after cementation according to the modified United States Public Health Service (USPHS) criteria. Independent samples t-test compared the adaptation values between heat-pressed and CAD/CAM groups. Paired t-test was used to evaluate marginal and internal adaptations of each group. Differences between the modified USPHS criteria ratings of heat-pressed and CAD/CAM groups were determined by the Mann-Whitney U test. Kaplan-Meier analysis was used to analyze the survival ratings of the veneers (p CAD/CAM veneers were 295 and 314.98 μm, respectively, and there was no statistically significant difference (p = 0.541). Internal adaptation values of groups were not statistically different either (201.82 μm for heat pressed; 195.47 μm for CAD/CAM p = 0.734). When marginal and internal adaptation values were compared within groups, there were significant differences both for heat-pressed (p CAD/CAM (p CAD/CAM or heat-pressed, had no effect on the marginal and internal adaptation of porcelain laminate veneers. The results showed that both fabrication techniques performed well after 2 years of clinical performance. © 2017 by the American College of Prosthodontists.

Replacing Heavily Damaged Teeth by Third Molar Autotransplantation With the Use of Cone-Beam Computed Tomography and Rapid Prototyping.

Science.gov (United States)

Verweij, Jop P; Anssari Moin, David; Wismeijer, Daniel; van Merkesteyn, J P Richard

2017-09-01

This article describes the autotransplantation of third molars to replace heavily damaged premolars and molars. Specifically, this article reports on the use of preoperative cone-beam computed tomographic planning and 3-dimensional (3D) printed replicas of donor teeth to prepare artificial tooth sockets. In the present case, an 18-year-old patient underwent autotransplantation of 3 third molars to replace 1 premolar and 2 molars that were heavily damaged after trauma. Approximately 1 year after the traumatic incident, autotransplantation with the help of 3D planning and rapid prototyping was performed. The right maxillary third molar replaced the right maxillary first premolar. The 2 mandibular wisdom teeth replaced the left mandibular first and second molars. During the surgical procedure, artificial tooth sockets were prepared with the help of 3D printed donor tooth copies to prevent iatrogenic damage to the actual donor teeth. These replicas of the donor teeth were designed based on the preoperative cone-beam computed tomogram and manufactured with the help of 3D printing techniques. The use of a replica of the donor tooth resulted in a predictable and straightforward procedure, with extra-alveolar times shorter than 2 minutes for all transplantations. The transplanted teeth were placed in infraocclusion and fixed with a suture splint. Postoperative follow-up showed physiologic integration of the transplanted teeth and a successful outcome for all transplants. In conclusion, this technique facilitates a straightforward and predictable procedure for autotransplantation of third molars. The use of printed analogues of the donor teeth decreases the risk of iatrogenic damage and the extra-alveolar time of the transplanted tooth is minimized. This facilitates a successful outcome. Copyright © 2017 American Association of Oral and Maxillofacial Surgeons. Published by Elsevier Inc. All rights reserved.

An inductorless wideband Balun-LNA in 65nm CMOS with balanced output

NARCIS (Netherlands)

Blaakmeer, S.C.; Klumperink, Eric A.M.; Nauta, Bram; Leenaerts, D.M.W.

2007-01-01

Abstract — An inductorless LNA with active balun is designed for multi-standard radio applications between 100MHz and 6GHz. It exploits a combination of a common gate stage and a common source stage with replica biasing to maximize balanced operation. The NF is designed to be around 3dB by using the

Virtual Worlds vs Books and Videos in History Education

Science.gov (United States)

Ijaz, Kiran; Bogdanovych, Anton; Trescak, Tomas

2017-01-01

In this paper, we investigate an application of virtual reality and artificial intelligence (AI) as a technological combination that has a potential to improve the learning experience and engage with the modern generation of students. To address this need, we have created a virtual reality replica of one of humanity's first cities, the city of…

Radiation protection in the design and operation of Sizewell B

International Nuclear Information System (INIS)

Oldfield, M.

1989-01-01

This paper raises Health Physics operational issues specific to PWR or not previously encountered by the CEGB, which need to be resolved before the operation of Sizewell B and its replica successors. Staffing, access to contamination areas, training, temporary scaffolding and temporary lead shielding are discussed and the author makes some observations and suggestions. (author)

Relative entanglement entropies in 1+1-dimensional conformal field theories

Energy Technology Data Exchange (ETDEWEB)

Ruggiero, Paola; Calabrese, Pasquale [International School for Advanced Studies (SISSA) and INFN,Via Bonomea 265, 34136, Trieste (Italy)

2017-02-08

We study the relative entanglement entropies of one interval between excited states of a 1+1 dimensional conformal field theory (CFT). To compute the relative entropy S(ρ{sub 1}∥ρ{sub 0}) between two given reduced density matrices ρ{sub 1} and ρ{sub 0} of a quantum field theory, we employ the replica trick which relies on the path integral representation of Tr(ρ{sub 1}ρ{sub 0}{sup n−1}) and define a set of Rényi relative entropies S{sub n}(ρ{sub 1}∥ρ{sub 0}). We compute these quantities for integer values of the parameter n and derive via the replica limit the relative entropy between excited states generated by primary fields of a free massless bosonic field. In particular, we provide the relative entanglement entropy of the state described by the primary operator i∂ϕ, both with respect to the ground state and to the state generated by chiral vertex operators. These predictions are tested against exact numerical calculations in the XX spin-chain finding perfect agreement.

Advances in thermographic signal reconstruction

Science.gov (United States)

Shepard, Steven M.; Frendberg Beemer, Maria

2015-05-01

Since its introduction in 2001, the Thermographic Signal Reconstruction (TSR) method has emerged as one of the most widely used methods for enhancement and analysis of thermographic sequences, with applications extending beyond industrial NDT into biomedical research, art restoration and botany. The basic TSR process, in which a noise reduced replica of each pixel time history is created, yields improvement over unprocessed image data that is sufficient for many applications. However, examination of the resulting logarithmic time derivatives of each TSR pixel replica provides significant insight into the physical mechanisms underlying the active thermography process. The deterministic and invariant properties of the derivatives have enabled the successful implementation of automated defect recognition and measurement systems. Unlike most approaches to analysis of thermography data, TSR does not depend on flawbackground contrast, so that it can also be applied to characterization and measurement of thermal properties of flaw-free samples. We present a summary of recent advances in TSR, a review of the underlying theory and examples of its implementation.

Fiscal 1997 report on the results of the international standardization R and D. Standardization of the optical evaluation method of the performance of shape stability of the apparel; 1997 nendo seika hokokusho kokusai hyojun soseigata kenkyu kaihatsu. Apareru seihin no keitai antei seino no kogakuteki hyoka hoho no hyojunka

Energy Technology Data Exchange (ETDEWEB)

NONE

1998-03-01

For the purpose of proposing the optical evaluation method of appearance of the apparel as an international standard, studies were made of the following: 3D determination/assessment method, development of mannequin holders, development of shape-retentive cubic replicas, washing/drying conditions, etc. As to the shape retention, cubic replicas for collars and cuffs were manufactured and inputted as image data. Besides, as to the evaluation items such as wrinkles, seam-puckering and pleats, the class determining algorithm was made by comparison between the measuring data and the results of the human-sight measurement. These were embodied into mannequin holders and integrated into the optical 3D instrumental system, which was discussed as a 3D determination/assessment system. By the development of the 3D measuring system and image analysis program, a comprehensive evaluation system was developed which can determine/assess the performance of shape stability of the apparel optically as absolute evaluation. This method will be internationally proposed as an optical evaluation method of the appearance of the apparel. 86 figs., 8 tabs.

Uso de células de Aedes albopictus C6/36 na propagação e classificação de arbovírus das famílias Togaviridae, Flaviviridae, Bunyaviridae e Rhabdoviridae

Directory of Open Access Journals (Sweden)

Luiz Tadeu Moraes Figueiredo

1990-03-01

Full Text Available Colônias de células de mosquito Aedes albopictus C6/36 foram infectadas com 23 arbovirus, sendo 19 destes existentes no Brasil, pertencentes às famílias Togaviridae, Flaviviridae, Bunyaviridae e Rhabdoviridae. A Replicação virai foi detectada por imunofluorescência indireta com todos os vírus estudados enquanto que o efeito citopático foi observado durante a infecção por alguns destes. No teste de imunofluorescência indireta utilizou-se fluidos ascíticos imunes de camundongos, específicos para os vírus estudados. A replicação virai caracterizada por grande produção de antígeno recomenda a utilização de células C6/36 na propagação e em tentativas de isolamento desses arbovirus. A técnica de imunofluorescência ofereceu importantes subsídios na classificação e identificação de vírus que replicam nestas células.

Statistical mechanics of the vertex-cover problem

Science.gov (United States)

Hartmann, Alexander K.; Weigt, Martin

2003-10-01

We review recent progress in the study of the vertex-cover problem (VC). The VC belongs to the class of NP-complete graph theoretical problems, which plays a central role in theoretical computer science. On ensembles of random graphs, VC exhibits a coverable-uncoverable phase transition. Very close to this transition, depending on the solution algorithm, easy-hard transitions in the typical running time of the algorithms occur. We explain a statistical mechanics approach, which works by mapping the VC to a hard-core lattice gas, and then applying techniques such as the replica trick or the cavity approach. Using these methods, the phase diagram of the VC could be obtained exactly for connectivities c e, the solution of the VC exhibits full replica symmetry breaking. The statistical mechanics approach can also be used to study analytically the typical running time of simple complete and incomplete algorithms for the VC. Finally, we describe recent results for the VC when studied on other ensembles of finite- and infinite-dimensional graphs.

Statistical mechanics of the vertex-cover problem

International Nuclear Information System (INIS)

Hartmann, Alexander K; Weigt, Martin

2003-01-01

We review recent progress in the study of the vertex-cover problem (VC). The VC belongs to the class of NP-complete graph theoretical problems, which plays a central role in theoretical computer science. On ensembles of random graphs, VC exhibits a coverable-uncoverable phase transition. Very close to this transition, depending on the solution algorithm, easy-hard transitions in the typical running time of the algorithms occur. We explain a statistical mechanics approach, which works by mapping the VC to a hard-core lattice gas, and then applying techniques such as the replica trick or the cavity approach. Using these methods, the phase diagram of the VC could be obtained exactly for connectivities c e, the solution of the VC exhibits full replica symmetry breaking. The statistical mechanics approach can also be used to study analytically the typical running time of simple complete and incomplete algorithms for the VC. Finally, we describe recent results for the VC when studied on other ensembles of finite- and infinite-dimensional graphs

Interfacial adhesion and superhydrophobicity modulated with polymeric nanopillars using integrated nanolithography

International Nuclear Information System (INIS)

Yang, Zong-Han; Kuo, Chiung-Wen; Chueh, Di-Yan; Tung, Yi-Chung; Chen, Peilin; Chien, Fan-Ching

2012-01-01

This paper reports the successful fabrication of flexible replicas with polymeric nanopillars using a process that combines nanosphere lithography, dry deep etching, soft-lithography, nanomolding and hydrophobic modification. The polymeric nanopillars with various sizes and three different periodicities have been implemented for systematic investigations on the interfacial properties on those surfaces. Such a flexible polymeric surface exhibited the maximum static contact angle of 166.8° at the nanopillars with a diameter of 60 nm, height of 710 nm and periodicity of 300 nm. The optimum aspect ratio should be less than 7 to avoid defects and collapses among those polymeric nanopillars during nanomolding. Metastable contact at the transition state indeed occurred on the parts of the intrinsic nanopillars, the experimental results of which also matched well to the classical theory of critical contact angle. Using hydrophobic modifications, metastable contacts among those polymeric nanopillars have further been eliminated. The polymeric nanopillars reported here were verified as having very strong adhesion as well as superhydrophobicity because such nanopillars made microdroplets hang firmly on the vertical surfaces of those designed replicas. (paper)

On the Reproducibility of Label-Free Quantitative Cross-Linking/Mass Spectrometry

Science.gov (United States)

Müller, Fränze; Fischer, Lutz; Chen, Zhuo Angel; Auchynnikava, Tania; Rappsilber, Juri

2018-02-01

Quantitative cross-linking/mass spectrometry (QCLMS) is an emerging approach to study conformational changes of proteins and multi-subunit complexes. Distinguishing protein conformations requires reproducibly identifying and quantifying cross-linked peptides. Here we analyzed the variation between multiple cross-linking reactions using bis[sulfosuccinimidyl] suberate (BS3)-cross-linked human serum albumin (HSA) and evaluated how reproducible cross-linked peptides can be identified and quantified by LC-MS analysis. To make QCLMS accessible to a broader research community, we developed a workflow that integrates the established software tools MaxQuant for spectra preprocessing, Xi for cross-linked peptide identification, and finally Skyline for quantification (MS1 filtering). Out of the 221 unique residue pairs identified in our sample, 124 were subsequently quantified across 10 analyses with coefficient of variation (CV) values of 14% (injection replica) and 32% (reaction replica). Thus our results demonstrate that the reproducibility of QCLMS is in line with the reproducibility of general quantitative proteomics and we establish a robust workflow for MS1-based quantitation of cross-linked peptides.

Acoustic multimode interference and self-imaging phenomena realized in multimodal phononic crystal waveguides

International Nuclear Information System (INIS)

Zou, Qiushun; Yu, Tianbao; Liu, Jiangtao; Wang, Tongbiao; Liao, Qinghua; Liu, Nianhua

2015-01-01

We report an acoustic multimode interference effect and self-imaging phenomena in an acoustic multimode waveguide system which consists of M parallel phononic crystal waveguides (M-PnCWs). Results show that the self-imaging principle remains applicable for acoustic waveguides just as it does for optical multimode waveguides. To achieve the dispersions and replicas of the input acoustic waves produced along the propagation direction, we performed the finite element method on M-PnCWs, which support M guided modes within the target frequency range. The simulation results show that single images (including direct and mirrored images) and N-fold images (N is an integer) are identified along the propagation direction with asymmetric and symmetric incidence discussed separately. The simulated positions of the replicas agree well with the calculated values that are theoretically decided by self-imaging conditions based on the guided mode propagation analysis. Moreover, the potential applications based on this self-imaging effect for acoustic wavelength de-multiplexing and beam splitting in the acoustic field are also presented. (paper)

Comprehensive quantification of signal-to-noise ratio and g-factor for image-based and k-space-based parallel imaging reconstructions.

Science.gov (United States)

Robson, Philip M; Grant, Aaron K; Madhuranthakam, Ananth J; Lattanzi, Riccardo; Sodickson, Daniel K; McKenzie, Charles A

2008-10-01

Parallel imaging reconstructions result in spatially varying noise amplification characterized by the g-factor, precluding conventional measurements of noise from the final image. A simple Monte Carlo based method is proposed for all linear image reconstruction algorithms, which allows measurement of signal-to-noise ratio and g-factor and is demonstrated for SENSE and GRAPPA reconstructions for accelerated acquisitions that have not previously been amenable to such assessment. Only a simple "prescan" measurement of noise amplitude and correlation in the phased-array receiver, and a single accelerated image acquisition are required, allowing robust assessment of signal-to-noise ratio and g-factor. The "pseudo multiple replica" method has been rigorously validated in phantoms and in vivo, showing excellent agreement with true multiple replica and analytical methods. This method is universally applicable to the parallel imaging reconstruction techniques used in clinical applications and will allow pixel-by-pixel image noise measurements for all parallel imaging strategies, allowing quantitative comparison between arbitrary k-space trajectories, image reconstruction, or noise conditioning techniques. (c) 2008 Wiley-Liss, Inc.

3D printed metal molds for hot embossing plastic microfluidic devices.

Science.gov (United States)

Lin, Tung-Yi; Do, Truong; Kwon, Patrick; Lillehoj, Peter B

2017-01-17

Plastics are one of the most commonly used materials for fabricating microfluidic devices. While various methods exist for fabricating plastic microdevices, hot embossing offers several unique advantages including high throughput, excellent compatibility with most thermoplastics and low start-up costs. However, hot embossing requires metal or silicon molds that are fabricated using CNC milling or microfabrication techniques which are time consuming, expensive and required skilled technicians. Here, we demonstrate for the first time the fabrication of plastic microchannels using 3D printed metal molds. Through optimization of the powder composition and processing parameters, we were able to generate stainless steel molds with superior material properties (density and surface finish) than previously reported 3D printed metal parts. Molds were used to fabricate poly(methyl methacrylate) (PMMA) replicas which exhibited good feature integrity and replication quality. Microchannels fabricated using these replicas exhibited leak-free operation and comparable flow performance as those fabricated from CNC milled molds. The speed and simplicity of this approach can greatly facilitate the development (i.e. prototyping) and manufacture of plastic microfluidic devices for research and commercial applications.

Ontological Constraints in Children's Inductive Inferences: Evidence From a Comparison of Inferences Within Animals and Vehicles

Directory of Open Access Journals (Sweden)

Andrzej Tarlowski

2018-04-01

Full Text Available There is a lively debate concerning the role of conceptual and perceptual information in young children's inductive inferences. While most studies focus on the role of basic level categories in induction the present research contributes to the debate by asking whether children's inductions are guided by ontological constraints. Two studies use a novel inductive paradigm to test whether young children have an expectation that all animals share internal commonalities that do not extend to perceptually similar inanimates. The results show that children make category-consistent responses when asked to project an internal feature from an animal to either a dissimilar animal or a similar toy replica. However, the children do not have a universal preference for category-consistent responses in an analogous task involving vehicles and vehicle toy replicas. The results also show the role of context and individual factors in inferences. Children's early reliance on ontological commitments in induction cannot be explained by perceptual similarity or by children's sensitivity to the authenticity of objects.

Statistical mechanical analysis of linear programming relaxation for combinatorial optimization problems

Science.gov (United States)

Takabe, Satoshi; Hukushima, Koji

2016-05-01

Typical behavior of the linear programming (LP) problem is studied as a relaxation of the minimum vertex cover (min-VC), a type of integer programming (IP) problem. A lattice-gas model on the Erdös-Rényi random graphs of α -uniform hyperedges is proposed to express both the LP and IP problems of the min-VC in the common statistical mechanical model with a one-parameter family. Statistical mechanical analyses reveal for α =2 that the LP optimal solution is typically equal to that given by the IP below the critical average degree c =e in the thermodynamic limit. The critical threshold for good accuracy of the relaxation extends the mathematical result c =1 and coincides with the replica symmetry-breaking threshold of the IP. The LP relaxation for the minimum hitting sets with α ≥3 , minimum vertex covers on α -uniform random graphs, is also studied. Analytic and numerical results strongly suggest that the LP relaxation fails to estimate optimal values above the critical average degree c =e /(α -1 ) where the replica symmetry is broken.

Measurements of drag and flow over biofilm

Science.gov (United States)

Hartenberger, Joel; Gose, James W.; Perlin, Marc; Ceccio, Steven L.

2017-11-01

Microbial `slime' biofilms detrimentally affect the performance of every day systems from medical devices to large ocean-going vessels. In flow applications, the presence of biofilm typically results in a drag increase and may alter the turbulence in the adjacent boundary layer. Recent studies emphasize the severity of the drag penalty associated with soft biofouling and suggest potential mechanisms underlying the increase; yet, fundamental questions remain-such as the role played by compliance and the contribution of form drag to the overall resistance experienced by a fouled system. Experiments conducted on live biofilm and 3D printed rigid replicas in the Skin-Friction Flow Facility at the University of Michigan seek to examine these factors. The hydrodynamic performance of the biofilms grown on test panels was evaluated through pressure drop measurements as well as conventional and microscale PIV. High-resolution, 3D rigid replicas of select cases were generated via additive manufacturing using surface profiles obtained from a laser scanning system. Drag and flow measurements will be presented along with details of the growth process and the surface profile characterization method.

Statistical mechanical analysis of linear programming relaxation for combinatorial optimization problems.

Science.gov (United States)

Takabe, Satoshi; Hukushima, Koji

2016-05-01

Typical behavior of the linear programming (LP) problem is studied as a relaxation of the minimum vertex cover (min-VC), a type of integer programming (IP) problem. A lattice-gas model on the Erdös-Rényi random graphs of α-uniform hyperedges is proposed to express both the LP and IP problems of the min-VC in the common statistical mechanical model with a one-parameter family. Statistical mechanical analyses reveal for α=2 that the LP optimal solution is typically equal to that given by the IP below the critical average degree c=e in the thermodynamic limit. The critical threshold for good accuracy of the relaxation extends the mathematical result c=1 and coincides with the replica symmetry-breaking threshold of the IP. The LP relaxation for the minimum hitting sets with α≥3, minimum vertex covers on α-uniform random graphs, is also studied. Analytic and numerical results strongly suggest that the LP relaxation fails to estimate optimal values above the critical average degree c=e/(α-1) where the replica symmetry is broken.

A popularity prediction and dynamic data replication study for the ATLAS distributed data management

CERN Document Server

AUTHOR|(INSPIRE)INSPIRE-00346910

ATLAS (A Toroidal LHC Apparatus) is one of several experiments of at the Large Hadron Collider (LHC) at CERN in Geneva, Switzerland. The LHC is the largest and most powerful particle accelerator in the world, which is able to operate at unprecedented energy levels. Because of this, ATLAS is able to observe physical phenomena and massive particles that were not observable before. The detectors at the LHC itself create vast amount of data that need to be accessible to physicists for their analysis. For this reason a worldwide computing grid (WLCG) was created that connects hundreds of computing centres across the planet. The experiments constantly create new data but older data has to be kept as well. The available resources are limited, which requires a smart management of the storage space. This thesis presents a method to dynamically create new replicas and delete unused replicas based on a prediction of data popularity to improve user waiting times. The first part gives an general introduction of the LHC, A...

On the optimal sampling of bandpass measurement signals through data acquisition systems

International Nuclear Information System (INIS)

Angrisani, L; Vadursi, M

2008-01-01

Data acquisition systems (DAS) play a fundamental role in a lot of modern measurement solutions. One of the parameters characterizing a DAS is its maximum sample rate, which imposes constraints on the signals that can be alias-free digitized. Bandpass sampling theory singles out separated ranges of admissible sample rates, which can be significantly lower than carrier frequency. But, how to choose the most convenient sample rate according to the purpose at hand? The paper proposes a method for the automatic selection of the optimal sample rate in measurement applications involving bandpass signals; the effects of sample clock instability and limited resolution are also taken into account. The method allows the user to choose the location of spectral replicas of the sampled signal in terms of normalized frequency, and the minimum guard band between replicas, thus introducing a feature that no DAS currently available on the market seems to offer. A number of experimental tests on bandpass digitally modulated signals are carried out to assess the concurrence of the obtained central frequency with the expected one

Community detection for fluorescent lifetime microscopy image segmentation

Science.gov (United States)

Hu, Dandan; Sarder, Pinaki; Ronhovde, Peter; Achilefu, Samuel; Nussinov, Zohar

2014-03-01

Multiresolution community detection (CD) method has been suggested in a recent work as an efficient method for performing unsupervised segmentation of fluorescence lifetime (FLT) images of live cell images containing fluorescent molecular probes.1 In the current paper, we further explore this method in FLT images of ex vivo tissue slices. The image processing problem is framed as identifying clusters with respective average FLTs against a background or "solvent" in FLT imaging microscopy (FLIM) images derived using NIR fluorescent dyes. We have identified significant multiresolution structures using replica correlations in these images, where such correlations are manifested by information theoretic overlaps of the independent solutions ("replicas") attained using the multiresolution CD method from different starting points. In this paper, our method is found to be more efficient than a current state-of-the-art image segmentation method based on mixture of Gaussian distributions. It offers more than 1:25 times diversity based on Shannon index than the latter method, in selecting clusters with distinct average FLTs in NIR FLIM images.

Generalized ensemble method applied to study systems with strong first order transitions

Science.gov (United States)

Małolepsza, E.; Kim, J.; Keyes, T.

2015-09-01

At strong first-order phase transitions, the entropy versus energy or, at constant pressure, enthalpy, exhibits convex behavior, and the statistical temperature curve correspondingly exhibits an S-loop or back-bending. In the canonical and isothermal-isobaric ensembles, with temperature as the control variable, the probability density functions become bimodal with peaks localized outside of the S-loop region. Inside, states are unstable, and as a result simulation of equilibrium phase coexistence becomes impossible. To overcome this problem, a method was proposed by Kim, Keyes and Straub [1], where optimally designed generalized ensemble sampling was combined with replica exchange, and denoted generalized replica exchange method (gREM). This new technique uses parametrized effective sampling weights that lead to a unimodal energy distribution, transforming unstable states into stable ones. In the present study, the gREM, originally developed as a Monte Carlo algorithm, was implemented to work with molecular dynamics in an isobaric ensemble and coded into LAMMPS, a highly optimized open source molecular simulation package. The method is illustrated in a study of the very strong solid/liquid transition in water.

Effects of moiré lattice structure on electronic properties of graphene

Science.gov (United States)

Huang, Lunan; Wu, Yun; Hershberger, M. T.; Mou, Daixiang; Schrunk, Benjamin; Tringides, Michael C.; Hupalo, Myron; Kaminski, Adam

2017-07-01

We study structural and electronic properties of graphene grown on silicone carbide (SiC) substrate using a scanning tunneling microscope, spot-profile-analysis low-energy electron diffraction, and angle-resolved photoemission spectroscopy. We find several new replicas of Dirac cones in the Brillouin zone. Their locations can be understood in terms of a combination of basis vectors linked to SiC 6 × 6 and graphene 6 √{3 }×6 √{3 } reconstruction. Therefore, these new features originate from the moiré caused by the lattice mismatch between SiC and graphene. More specifically, Dirac cone replicas are caused by underlying weak modulation of the ionic potential by the substrate that is then experienced by the electrons in the graphene. We also demonstrate that this effect is equally strong in single- and trilayer graphene; therefore, the additional Dirac cones are intrinsic features rather than the result of photoelectron diffraction. These new features in the electronic structure are very important for the interpretation of recent transport measurements and can assist in tuning the properties of graphene for practical applications.

Popularity Prediction Tool for ATLAS Distributed Data Management

CERN Document Server

Beermann, T; The ATLAS collaboration; Stewart, G; Lassnig, M; Garonne, V; Barisits, M; Vigne, R; Serfon, C; Goossens, L; Nairz, A; Molfetas, A

2013-01-01

This paper describes a popularity prediction tool for data-intensive data management systems, such as ATLAS distributed data management (DDM). It is fed by the DDM popularity system, which produces historical reports about ATLAS data usage, providing information about files, datasets, users and sites where data was accessed. The tool described in this contribution uses this historical information to make a prediction about the future popularity of data. It finds trends in the usage of data using a set of neural networks and a set of input parameters and predicts the number of accesses in the near term future. This information can then be used in a second step to improve the distribution of replicas at sites, taking into account the cost of creating new replicas (bandwidth and load on the storage system) compared to gain of having new ones (faster access of data for analysis). To evaluate the benefit of the redistribution a grid simulator is introduced that is able replay real workload on different data distri...

Popularity Prediction Tool for ATLAS Distributed Data Management

CERN Document Server

Beermann, T; The ATLAS collaboration; Stewart, G; Lassnig, M; Garonne, V; Barisits, M; Vigne, R; Serfon, C; Goossens, L; Nairz, A; Molfetas, A

2014-01-01

This paper describes a popularity prediction tool for data-intensive data management systems, such as ATLAS distributed data management (DDM). It is fed by the DDM popularity system, which produces historical reports about ATLAS data usage, providing information about files, datasets, users and sites where data was accessed. The tool described in this contribution uses this historical information to make a prediction about the future popularity of data. It finds trends in the usage of data using a set of neural networks and a set of input parameters and predicts the number of accesses in the near term future. This information can then be used in a second step to improve the distribution of replicas at sites, taking into account the cost of creating new replicas (bandwidth and load on the storage system) compared to gain of having new ones (faster access of data for analysis). To evaluate the benefit of the redistribution a grid simulator is introduced that is able replay real workload on different data distri...

Statistical mechanics of learning orthogonal signals for general covariance models

International Nuclear Information System (INIS)

Hoyle, David C

2010-01-01

Statistical mechanics techniques have proved to be useful tools in quantifying the accuracy with which signal vectors are extracted from experimental data. However, analysis has previously been limited to specific model forms for the population covariance C, which may be inappropriate for real world data sets. In this paper we obtain new statistical mechanical results for a general population covariance matrix C. For data sets consisting of p sample points in R N we use the replica method to study the accuracy of orthogonal signal vectors estimated from the sample data. In the asymptotic limit of N,p→∞ at fixed α = p/N, we derive analytical results for the signal direction learning curves. In the asymptotic limit the learning curves follow a single universal form, each displaying a retarded learning transition. An explicit formula for the location of the retarded learning transition is obtained and we find marked variation in the location of the retarded learning transition dependent on the distribution of population covariance eigenvalues. The results of the replica analysis are confirmed against simulation

Microstructure and microchemistry variation during thermal exposure of low alloy steels

International Nuclear Information System (INIS)

Kim, S.; Shekhter, A.; Ringer, S.P.

2002-01-01

The microstructure of an ex-service (136,000 h) Fe-1Cr-1Mo-0.25V (wt%) low alloy steel turbine rotor was investigated using energy dispersive X-ray spectroscopy (EDXS) techniques in TEM/STEM on extraction replicas. Since different stages of the rotor experience different thermal histories, an examination of microstructural variations can serve as a method to indicate metallurgical factors affecting service-lifetime of the material. The coldest, hottest and most embrittled stages were taken for investigation. The overall fraction of carbide precipitation was measured using image analysis techniques and results indicated that the hottest stage possessed the highest precipitate volume fraction. Large area EDXS analysis using a defocused electron beam was also performed on the replica samples and this was supported by spot analyses using scanning TEM to identify individual carbides so as to allow quantification of the enrichment of solute into carbides as a function of service temperature. Three-dimensional atom probe field ion microscopy was also used to assess the chemistry at the interface between matrix and precipitate

Rucio WebUI - The Web Interface for the ATLAS Distributed Data Management

CERN Document Server

Beermann, Thomas; The ATLAS collaboration; Barisits, Martin-Stefan; Serfon, Cedric; Garonne, Vincent

2016-01-01

With the current distributed data management system for ATLAS, called Rucio, all user interactions, e.g. the Rucio command line tools or the ATLAS workload management system, communicate with Rucio through the same REST-API. This common interface makes it possible to interact with Rucio using a lot of different programming languages, including Javascript. Using common web application frameworks like JQuery and web.py, a web application for Rucio was built. The main component is R2D2 - the Rucio Rule Definition Droid - which gives the users a simple way to manage their data on the grid. They can search for particular datasets and get details about its metadata and available replicas and easily create rules to create new replicas and delete them if not needed anymore. On the other hand it is possible for site admins to restrict transfers to their site by setting quotas and manually approve transfers. Besides R2D2 additional features include transfer backlog monitoring for shifters, group space monitoring for gr...

How Different Media Affect Adolescents' Views of the Hero: Lessons from Amistad

Science.gov (United States)

Friedland, Ellen S.; Phelps, Stephen; del Prado Hill, Pixita

2006-01-01

"Amistad," the story of a group of Mende people illegally brought to the United States from West Africa in 1839, was taught to a group of 90 eighth grade students. To learn about the "Amistad," these eighth graders visited a replica of the ship, read a nonfiction account of the Amistad story, and viewed the Steven Spielberg…

Learning Curves and Bootstrap Estimates for Inference with Gaussian Processes: A Statistical Mechanics Study

DEFF Research Database (Denmark)

Malzahn, Dorthe; Opper, Manfred

2003-01-01

We employ the replica method of statistical physics to study the average case performance of learning systems. The new feature of our theory is that general distributions of data can be treated, which enables applications to real data. For a class of Bayesian prediction models which are based...... on Gaussian processes, we discuss Bootstrap estimates for learning curves....

A Trainee Demand Analysis for the Expansion of the Marine Corps Embassy Security Group

Science.gov (United States)

2013-03-01

in three phases with barracks, training facilities and administrative buildings with a small- scale mock replica of a U.S. embassy. Construction...tttintft/ dass year l 164 ~ Sttp 12 [.qJtctod groduottsl)<tr class year I liS ~ [.qJtctod Srlduattsl)<tr ct•u yeor 2 90 Expe<tod sr~duottsl)<tr clan

MICRO-SCALE ENERGY DIRECTORS FOR ULTRASONIC WELDING

DEFF Research Database (Denmark)

2016-01-01

The invention relates to a replication tool (1) for producing a part (4) with a microscale textured replica surface (5a, 5b, 5c, 5d). The replication tool (1) comprises a tool surface (2a, 2b) defining a general shape of the item (4). The tool surface (2a, 2b) comprises a microscale structured ma...

World War II Informational Fact Sheets.

Science.gov (United States)

Department of Defense, Washington, DC.

This commemorative book provides numerous fact sheets on various aspects of World War II, both on the fighting front and the homefront. Replicas of posters of the war era, descriptions of battles with maps, contributions of women and minorities to the war effort, even music of the wartime era, add to this collection of resource materials useful to…

SEM: A user's manual for materials science

International Nuclear Information System (INIS)

Gabriel, B.L.

1985-01-01

This book provides a reference of techniques used by the metallurgical microscopist. It contains an introduction to the instrumentation and methods of scanning electron microscopy with historical as well as state-of-the-art methodologies. Topics covered include: SEM instrumentation, photography, energy dispersive spectroscopy, introduction to sample preparation, polished samples, fracture surfaces, replicas and thin films

Critical commentary on dose-rate evaluations

International Nuclear Information System (INIS)

Dowdy, E.J.; Malenfant, R.E.; Plassmann, E.A.

1984-01-01

Survivors of Hiroshima and Nagasaki present a unique problem in dosimetry: the effects of radiation exposure may be inferred although the exposure itself is unknown. Experience with a replica of Little Boy demonstrates the difficulties of measuring dose rates, the problems of comparing measurements with calculations, and the inadequacy of the conventional standards that are used to calibrate dosimeters

A Medieval Clock Made out of Simple Materials

Science.gov (United States)

Danese, B.; Oss, S.

2008-01-01

A cheap replica of the verge-and-foliot clock has been built from simple materials. It is a didactic tool of great power for physics teaching at every stage of schooling, in particular at university level. An account is given of its construction and its working principles, together with motivated examples of a few activities. (Contains 3 tables…

O{sub 2} depletion in granitic media. The Rex project

Energy Technology Data Exchange (ETDEWEB)

Puigdomenech, I. [Royal Inst. of Technology, Stockholm (Sweden); Ambrosi, J.P.; Eisenlohr, L.; Lartigue, J.E. [CNRS, Aix-en-Provence (France); Banwart, S.A. [Univ. of Sheffield (United Kingdom); Bateman, K.; Milodowski, A.E.; West, J.M. [British Geological Survey, Nottingham (United Kingdom); Griffault, L. [ANDRA (France); Gustafsson, E. [Geosigma AB, Uppsala (Sweden); Hama, K.; Yoshida, H. [JNC, Gifu (Japan). Tono Geoscience Centre; Kotelnikova, S.; Pedersen, K. [Goeteborg Univ. (Sweden); Michaud, V.; Trotignon, L. [CEA, Cadarache (France); Rivas Perez, J. [Univ. of Bradford (United Kingdom); Tullborg, E.L. [Terralogica AB, Graabo (Sweden)

2001-02-01

The redox conditions are of consequence for the performance of nuclear repositories. The presence of molecular oxygen (O{sub 2}) would affect the corrosion of canisters and the migration of radionuclides eventually released from a damaged canister. The rate of disappearance of O{sub 2} left in voids at repository closure is therefore an important information when evaluating repository designs. The REX project (Redox Experiment in Detailed Scale) has been carried out within the frame of SKB Aespoe Hard Rock Laboratory in Sweden. The aim was to determine how O{sub 2} trapped in the closed repository would react with the rock minerals in the tunnel and deposition holes and in the water conducting fractures. The REX project consisted of the following sections: Field investigations at Aespoe: Microbial O{sub 2} consumption at several sites in the Aespoe tunnel. The in situ experiment: Injection of oxygen and monitoring of O{sub 2} uptake in a confined fracture surface. The Replica Experiment: a laboratory study using the other half of the fracture surface used for the in situ experiment. Laboratory experiments: needed to support the interpretation of the field and replica experiments. Conducted with groundwaters, bacteria, and mineral samples from Aespoe. The results from the in-situ experiment were confirmed by those of the replica experiment performed in the CEA laboratory in France. Both were concordant in showing time scales for O{sub 2} uptake in the order of days. The agreement was remarkable when taking into account the differences in experimental conditions. For example, different microbial processes took place in the two experiments. Laboratory studies with rock samples demonstrated that microbial activity induced increased chemical weathering, with the formation of clay minerals. Rates of O{sub 2} uptake by fracture filling minerals were determined under laboratory conditions. These rates were faster than those reported in literature studies of pure mineral

Training of NPP operators: OJT completes use of non replica simulator

International Nuclear Information System (INIS)

Billoen, G. van

1996-01-01

In the paper, it is discussed the contribution of a Multifunctional Optimised Scope Simulator (MOSS), to the training of nuclear power plant operators and we will explain how this tool can be integrated into a training plan including On the Job Training (OJT). Then it is analyzed to what extent OJT and MOSS based training can be complementary

Rare events via multiple reaction channels sampled by path replica exchange

NARCIS (Netherlands)

Bolhuis, P.G.

2008-01-01

Transition path sampling (TPS) was developed for studying activated processes in complex systems with unknown reaction coordinate. Transition interface sampling (TIS) allows efficient evaluation of the rate constants. However, when the transition can occur via more than one reaction channel

10 CFR 1002.12 - Use of replicas, reproductions, and embossing seals.

Science.gov (United States)

2010-01-01

..., certificates, medals, and plaques. (5) Motion picture film, video tape and other audiovisual media prepared by... graphics issued by and attributed to DOE, or joint statements of DOE with one or more Federal agencies...) Motion picture film, video tape, and other audiovisual media prepared by or for DOE and attributed...

Research of transport and deposition of aerosol in human airway replica

Science.gov (United States)

Lizal, Frantisek; Jedelsky, Jan; Elcner, Jakub; Durdina, Lukas; Halasova, Tereza; Mravec, Filip; Jicha, Miroslav

2012-04-01

Growing concern about knowledge of aerosol transport in human lungs is caused by great potential of use of inhaled pharmaceuticals. Second substantial motive for the research is an effort to minimize adverse effects of particular matter emitted by traffic and industry on human health. We created model geometry of human lungs to 7th generation of branching. This model geometry was used for fabrication of two physical models. The first one is made from thin walled transparent silicone and it allows a measurement of velocity and size of aerosol particles by Phase Doppler Anemometry (PDA). The second one is fabricated by stereolithographic method and it is designed for aerosol deposition measurements. We provided a series of measurements of aerosol transport in the transparent model and we ascertained remarkable phenomena linked with lung flow. The results are presented in brief. To gather how this phenomena affects aerosol deposition in human lungs we used the second model and we developed a technique for deposition fraction and deposition efficiency assessment. The results confirmed that non-symmetric and complicated shape of human airways essentially affects transport and deposition of aerosol. The research will now focus on deeper insight in aerosol deposition.

Research of transport and deposition of aerosol in human airway replica

Directory of Open Access Journals (Sweden)

Mravec Filip

2012-04-01

Full Text Available Growing concern about knowledge of aerosol transport in human lungs is caused by great potential of use of inhaled pharmaceuticals. Second substantial motive for the research is an effort to minimize adverse effects of particular matter emitted by traffic and industry on human health. We created model geometry of human lungs to 7th generation of branching. This model geometry was used for fabrication of two physical models. The first one is made from thin walled transparent silicone and it allows a measurement of velocity and size of aerosol particles by Phase Doppler Anemometry (PDA. The second one is fabricated by stereolithographic method and it is designed for aerosol deposition measurements. We provided a series of measurements of aerosol transport in the transparent model and we ascertained remarkable phenomena linked with lung flow. The results are presented in brief. To gather how this phenomena affects aerosol deposition in human lungs we used the second model and we developed a technique for deposition fraction and deposition efficiency assessment. The results confirmed that non-symmetric and complicated shape of human airways essentially affects transport and deposition of aerosol. The research will now focus on deeper insight in aerosol deposition.

Pressure tube replication techniques using the advanced NDE system

International Nuclear Information System (INIS)

Isherwood, A.; Jarron, D.; Travers, J.; Hanley, K.

2006-01-01

Periodic and in-service inspections of fuel channels are essential for the proper assessment of the structural integrity of these vital components. The arrival of new delivery devices for fuel channel inspections has driven new tooling for gathering and analyzing NDE data. The Advanced Non-Destructive Examination (ANDE) Replication System has been designed to compliment the ANDE Inspection System by providing a two plate replica system. These plates deliver a compound that makes a positive 3D mould of known ID flaws to gather information for flaw assessment. The two plate system, and the ability to retrieve and recharge the moulds in the reactor vault allows for gathering defect information with minimal critical path time. The ANDE Replication System was built on the foundation of CIGAR experience by a solid design team familiar with 3D CAD and manufacturing techniques. The tooling and controls went through a series of integration stages in the laboratory and then later with the Universal Delivery Machine (UDM) before being used on reactor starting in 2003. Once the inspection phase of an outage has been completed, the analysis team provides a list of flaw candidates that require 'root radius' information to complete the flaw assessment. This is a measure of how sharp the corners are in the defect. This data is used as part of the stress calculation that ultimately determines how many shutdown cycles that the reactor can have before that flaw must be re-inspected. The inspection tool is then swapped out of the delivery machine in the reactor vault using the versatile connectorized umbilical. The replication tool is loaded on the machine, charged with replica compound on each of the two plates, and then sent to the target channel(s). On channel, the operators use the same console as the ANDE Inspection System, but have a separate control system with a graphical display of the tool that shows its position in the channel with respect to the E-face. The axial and

arXiv Ergodicity of the LLR method for the Density of States

CERN Document Server

Cossu, Guido; Pellegrini, Roberto; Rago, Antonio

2018-01-01

The LLR method is a novel algorithm that enables us to evaluate the density of states in lattice gauge theory. We present our study of the ergodicity properties of the LLR algorithm for the model of Yang Mills SU(3). We show that the use of the replica exchange method alleviates significantly the topological freeze-out that severely affects other algorithms.

Operator training and requalification at GPU Nuclear

International Nuclear Information System (INIS)

Long, R.L.; Barrett, R.J.; Newton, S.L.

1982-01-01

The operator training and requalification programs at GPU Nuclear's Oyster Creek (650 MWe BWR) and Three Mile Island-1 (776 MWe PWR) nuclear plants have undergone significant revisions since the Three Mile Island-2 accident. This paper describes the Training and Education organization, the expanded training facilities, including basic principle trainers and replica simulators, and the present operator training and requalification programs

SU(3) breaking and the pseudo-scalar spectrum in multi-taste QCD

Energy Technology Data Exchange (ETDEWEB)

Creutz, Michael

2017-06-18

Using the Sigma model to explore the lowest order pseudo-scalar spectrum with SU(3) breaking, this talk considers an additional exact "taste" symmetry to mimic species doubling. Rooting replicas of a valid approach such as Wilson fermions reproduces the desired physical spectrum. In contrast, extra symmetries of the rooted staggered approach leave spurious states and a flavor dependent taste multiplicity.

Popularity Prediction Tool for ATLAS Distributed Data Management

Science.gov (United States)

Beermann, T.; Maettig, P.; Stewart, G.; Lassnig, M.; Garonne, V.; Barisits, M.; Vigne, R.; Serfon, C.; Goossens, L.; Nairz, A.; Molfetas, A.; Atlas Collaboration

2014-06-01

This paper describes a popularity prediction tool for data-intensive data management systems, such as ATLAS distributed data management (DDM). It is fed by the DDM popularity system, which produces historical reports about ATLAS data usage, providing information about files, datasets, users and sites where data was accessed. The tool described in this contribution uses this historical information to make a prediction about the future popularity of data. It finds trends in the usage of data using a set of neural networks and a set of input parameters and predicts the number of accesses in the near term future. This information can then be used in a second step to improve the distribution of replicas at sites, taking into account the cost of creating new replicas (bandwidth and load on the storage system) compared to gain of having new ones (faster access of data for analysis). To evaluate the benefit of the redistribution a grid simulator is introduced that is able replay real workload on different data distributions. This article describes the popularity prediction method and the simulator that is used to evaluate the redistribution.

Polycarbonate as an Elasto-Plastic Material Model for Simulation of the Microstructure Hot Imprint Process

Directory of Open Access Journals (Sweden)

Rokas Šakalys

2013-08-01

Full Text Available The thermal imprint process of polymer micro-patterning is widely applied in areas such as manufacturing of optical parts, solar energy, bio-mechanical devices and chemical chips. Polycarbonate (PC, as an amorphous polymer, is often used in thermoforming processes because of its good replication characteristics. In order to obtain replicas of the best quality, the imprint parameters (e.g., pressure, temperature, time, etc. must be determined. Therefore finite element model of the hot imprint process of lamellar periodical microstructure into PC has been created using COMSOL Multiphysics. The mathematical model of the hot imprint process includes three steps: heating, imprinting and demolding. The material properties of amorphous PC strongly depend on the imprint temperature and loading pressure. Polycarbonate was modelled as an elasto-plastic material, since it was analyzed below the glass transition temperature. The hot imprint model was solved using the heat transfer and the solid stress-strain application modes with thermal contact problem between the mold and polycarbonate. It was used for the evaluation of temperature and stress distributions in the polycarbonate during the hot imprint process. The quality of the replica, by means of lands filling ratio, was determined as well.

Digital Earth reloaded – Beyond the next generation

International Nuclear Information System (INIS)

Ehlers, M; Woodgate, P; Annoni, A; Schade, S

2014-01-01

Digital replicas (or 'mirror worlds') of complex entities and systems are now routine in many fields such as aerospace engineering; archaeology; medicine; or even fashion design. The Digital Earth (DE) concept as a digital replica of the entire planet occurs in Al Gore's 1992 book Earth in the Balance and was popularized in his speech at the California Science Center in January 1998. It played a pivotal role in stimulating the development of a first generation of virtual globes, typified by Google Earth that achieved many elements of this vision. Almost 15 years after Al Gore's speech, the concept of DE needs to be re-evaluated in the light of the many scientific and technical developments in the fields of information technology, data infrastructures, citizen?s participation, and earth observation that have taken place since. This paper intends to look beyond the next generation predominantly based on the developments of fields outside the spatial sciences, where concepts, software, and hardware with strong relationships to DE are being developed without referring to this term. It also presents a number of guiding criteria for future DE developments

Digital Earth reloaded - Beyond the next generation

Science.gov (United States)

Ehlers, M.; Woodgate, P.; Annoni, A.; Schade, S.

2014-02-01

Digital replicas (or 'mirror worlds') of complex entities and systems are now routine in many fields such as aerospace engineering; archaeology; medicine; or even fashion design. The Digital Earth (DE) concept as a digital replica of the entire planet occurs in Al Gore's 1992 book Earth in the Balance and was popularized in his speech at the California Science Center in January 1998. It played a pivotal role in stimulating the development of a first generation of virtual globes, typified by Google Earth that achieved many elements of this vision. Almost 15 years after Al Gore's speech, the concept of DE needs to be re-evaluated in the light of the many scientific and technical developments in the fields of information technology, data infrastructures, citizen?s participation, and earth observation that have taken place since. This paper intends to look beyond the next generation predominantly based on the developments of fields outside the spatial sciences, where concepts, software, and hardware with strong relationships to DE are being developed without referring to this term. It also presents a number of guiding criteria for future DE developments.

Microstructural evolution in modified 9Cr-1Mo ferritic/martensitic steel irradiated with mixed high-energy proton and neutron spectra at low temperatures

International Nuclear Information System (INIS)

Sencer, B.H.; Garner, F.A.; Gelles, D.S.; Bond, G.M.; Maloy, S.A.

2002-01-01

Modified 9Cr-1Mo ferritic/martensitic steel was exposed at 32-57 deg. C to a mixed proton/neutron particle flux and spectrum at the Los Alamos Neutron Science Center. The microstructure of unirradiated 9Cr-1Mo consists of laths, dislocations and carbides. Examination of electron diffraction patterns obtained from extraction replicas of unirradiated 9Cr-1Mo revealed that the precipitate microstructure was primarily dominated by M 23 C 6 carbides. The post-irradiation microstructure contained black-spot damage in addition to precipitates and dislocations. Examination of electron diffraction patterns revealed diffuse rings from M 23 C 6 carbides, indicating amorphization and/or nanocrystallinity. Crystalline MC carbides were also found. No cavity formation was found although a significant amount of helium and hydrogen generation had been generated. TEM-EDS examination of extraction replicas for carbides from unirradiated and irradiated samples did not show any detectable changes in composition of either M 23 C 6 or MC carbides. There was also no evident change in carbide size. Lattice images of M 23 C 6 carbides revealed an amorphous microstructure following irradiation, but MC carbides were still crystalline

UNRES server for physics-based coarse-grained simulations and prediction of protein structure, dynamics and thermodynamics.

Science.gov (United States)

Czaplewski, Cezary; Karczynska, Agnieszka; Sieradzan, Adam K; Liwo, Adam

2018-04-30

A server implementation of the UNRES package (http://www.unres.pl) for coarse-grained simulations of protein structures with the physics-based UNRES model, coined a name UNRES server, is presented. In contrast to most of the protein coarse-grained models, owing to its physics-based origin, the UNRES force field can be used in simulations, including those aimed at protein-structure prediction, without ancillary information from structural databases; however, the implementation includes the possibility of using restraints. Local energy minimization, canonical molecular dynamics simulations, replica exchange and multiplexed replica exchange molecular dynamics simulations can be run with the current UNRES server; the latter are suitable for protein-structure prediction. The user-supplied input includes protein sequence and, optionally, restraints from secondary-structure prediction or small x-ray scattering data, and simulation type and parameters which are selected or typed in. Oligomeric proteins, as well as those containing D-amino-acid residues and disulfide links can be treated. The output is displayed graphically (minimized structures, trajectories, final models, analysis of trajectory/ensembles); however, all output files can be downloaded by the user. The UNRES server can be freely accessed at http://unres-server.chem.ug.edu.pl.