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Sample records for repair ber capacity

  1. On the BER and capacity analysis of MIMO MRC systems with channel estimation error

    KAUST Repository

    Yang, Liang

    2011-10-01

    In this paper, we investigate the effect of channel estimation error on the capacity and bit-error rate (BER) of a multiple-input multiple-output (MIMO) transmit maximal ratio transmission (MRT) and receive maximal ratio combining (MRC) systems over uncorrelated Rayleigh fading channels. We first derive the ergodic (average) capacity expressions for such systems when power adaptation is applied at the transmitter. The exact capacity expression for the uniform power allocation case is also presented. Furthermore, to investigate the diversity order of MIMO MRT-MRC scheme, we derive the BER performance under a uniform power allocation policy. We also present an asymptotic BER performance analysis for the MIMO MRT-MRC system with multiuser diversity. The numerical results are given to illustrate the sensitivity of the main performance to the channel estimation error and the tightness of the approximate cutoff value. © 2011 IEEE.

  2. Online capacity planning of repairs

    NARCIS (Netherlands)

    Kempen, J.W. van

    2006-01-01

    In this thesis we describe our research into a capacity planning problem that occurs in practice at a big group of car dealers, the Rüttchen group. A considerable part is about the construction of a model for this problem, showing and justifying the assumptions we make. Then it is shown that this mo

  3. BER Analysis to Increase Capacity of A Cellular System Using SDMA Over a Multipath Rayleigh Fading Channel

    Directory of Open Access Journals (Sweden)

    M. Gangadharappa

    2010-07-01

    Full Text Available In this paper, we have presented how the capacity of cellular system can be enhanced by using Space Division Multiple Access (SDMA with directive antenna in mobile communication systems. One of the biggest draw back of wireless environment is the limited bandwidth. However,the users sharing this limited bandwidth have been increased considerably. SDMA is a technology by which the capacity of the existing mobile communication system can economically be increased. Adaptive Antenna provides a spot beam for each users in the cells as it moves. This paper analysis the comparison of average Bit Error Rate (BER of SDMA and Code Division Multiple Access (CDMAtechnique and the way in which SDMA can be introduced to increase the capacity of a cellular system in Frequency Selective Multipath Rayleigh Fading Channel. The BER is found for a standard omni directional base station antenna, and the another set of curve is found for flat top beam having a directivity of 8 dB. We see that SDMA offers improved capacity in wireless communication system.

  4. Is the Oxidative DNA Damage Level of Human Lymphocyte Correlated with the Antioxidant Capacity of Serum or the Base Excision Repair Activity of Lymphocyte?

    Directory of Open Access Journals (Sweden)

    Yi-Chih Tsai

    2013-01-01

    Full Text Available A random screening of human blood samples from 24 individuals of nonsmoker was conducted to examine the correlation between the oxidative DNA damage level of lymphocytes and the antioxidant capacity of serum or the base excision repair (BER activity of lymphocytes. The oxidative DNA damage level was measured with comet assay containing Fpg/Endo III cleavage, and the BER activity was estimated with a modified comet assay including nuclear extract of lymphocytes for enzymatic cleavage. Antioxidant capacity was determined with trolox equivalent antioxidant capacity assay. We found that though the endogenous DNA oxidation levels varied among the individuals, each individual level appeared to be steady for at least 1 month. Our results indicate that the oxidative DNA damage level is insignificantly or weakly correlated with antioxidant capacity or BER activity, respectively. However, lymphocytes from carriers of Helicobacter pylori (HP or Hepatitis B virus (HBV tend to give higher levels of oxidative DNA damage (P<0.05. Though sera of this group of individuals show no particular tendency with reduced antioxidant capacity, the respective BER activities of lymphocytes are lower in average (P<0.05. Thus, reduction of repair activity may be associated with the genotoxic effect of HP or HBV infection.

  5. Polychlorinated biphenyl quinone induces oxidative DNA damage and repair responses: The activations of NHEJ, BER and NER via ATM-p53 signaling axis

    Energy Technology Data Exchange (ETDEWEB)

    Dong, Hui; Shi, Qiong; Song, Xiufang; Fu, Juanli; Hu, Lihua; Xu, Demei; Su, Chuanyang; Xia, Xiaomin; Song, Erqun; Song, Yang, E-mail: songyangwenrong@hotmail.com

    2015-07-01

    Our previous studies demonstrated that polychlorinated biphenyl (PCB) quinone induced oxidative DNA damage in HepG2 cells. To promote genomic integrity, DNA damage response (DDR) coordinates cell-cycle transitions, DNA repair and apoptosis. PCB quinone-induced cell cycle arrest and apoptosis have been documented, however, whether PCB quinone insult induce DNA repair signaling is still unknown. In this study, we identified the activation of DDR and corresponding signaling events in HepG2 cells upon the exposure to a synthetic PCB quinone, PCB29-pQ. Our data illustrated that PCB29-pQ induces the phosphorylation of p53, which was mediated by ataxia telangiectasia mutated (ATM) protein kinase. The observed phosphorylated histone H2AX (γ-H2AX) foci and the elevation of 8-hydroxy-2′-deoxyguanosine (8-OHdG) indicated that DDR was stimulated by PCB29-pQ treatment. Additionally, we found PCB29-pQ activates non-homologous end joining (NHEJ), base excision repair (BER) and nucleotide excision repair (NER) signalings. However, these repair pathways are not error-free processes and aberrant repair of DNA damage may cause the potential risk of carcinogenesis and mutagenesis. - Highlights: • Polychlorinated biphenyl quinone induces oxidative DNA damage in HepG2 cells. • The elevation of γ-H2AX and 8-OHdG indicates the activation of DNA damage response. • ATM-p53 signaling acts as the DNA damage sensor and effector. • Polychlorinated biphenyl quinone activates NHEJ, BER and NER signalings.

  6. 4. DNA REPAIR CAPACITY IN LUNG CANCER PATIENTS

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    @@The ability for DNA repair is an important host factor which influences the individual susceptibility to genotoxic carcinogen exposures. It has been shown in different case-control studies that DNA repair capacity (DRC) can be reduced in lung cancer patients.We have used an alkaline comet assay to measure the cellular DRC in peri-pheral blood lymphocytes of lung cancer patients and tumor-free control

  7. Assessment of Human DNA Repair (NER) Capacity With DNA Repair Rate (DRR) by Comet Assay

    Institute of Scientific and Technical Information of China (English)

    WEI ZHENG; JI-LIANG HE; LI-FEN JIN; JIAN-LIN LOU; BAO-HONG WANG

    2005-01-01

    Objective Alkaline comet assay was used to evaluate DNA repair (nucleotide excision repair, NER) capacity of human fresh lymphocytes from 12 young healthy non-smokers (6 males and 6 females). Methods Lymphocytes were exposed to UV-C (254 nm) at the dose rate of 1.5 J/m2/sec. Novobiocin (NOV) and aphidicolin (APC), DNA repair inhibitors, were utilized to imitate the deficiency of DNA repair capacity at the incision and ligation steps of NER. Lymphocytes from each donor were divided into three grougs: UVC group, UVC plus NOV group, and UVC plus APC group. DNA single strand breaks were detected in UVC irradiated cells incubated for 0, 30, 60, 90, 120, 180, and 240 min after UVC irradiation. DNA repair rate (DRR) served as an indicator of DNA repair capacity. Results The results indicated that the maximum DNA damage (i.e. maximum tail length) in the UVC group mainly appeared at 90 min. The ranges of DRRs in the UVC group were 62.84%-98.71%. Average DRR value was 81.84%. The DRR difference between males and females was not significant (P<0.05). However, the average DRR value in the UVC plus NOV group and the UVC plus APC group was 52.98% and 39.57% respectively, which were significantly lower than that in the UVC group (P<0.01). Conclusion The comet assay is a rapid, simple and sensitive screening test to assess individual DNA repair (NER) capacity. It is suggested that the time to detect DNA single strand breaks in comet assay should include 0 (before UV irradiation), 90 and 240 min after exposure to 1.5 J·m-2 UVC at least. The DRR, as an indicator, can represent the individual DNA repair capacity in comet assay.

  8. Enhanced base excision repair capacity in carotid atherosclerosis may protect nuclear DNA but not mitochondrial DNA

    DEFF Research Database (Denmark)

    Skarpengland, Tonje; B. Dahl, Tuva; Skjelland, Mona

    2016-01-01

    Lesional and systemic oxidative stress has been implicated in the pathogenesis of atherosclerosis, potentially leading to accumulation of DNA base lesions within atherosclerotic plaques. Although base excision repair (BER) is a major pathway counteracting oxidative DNA damage, our knowledge on BER...... and accumulation of DNA base lesions in clinical atherosclerosis is scarce. Here, we evaluated the transcriptional profile of a wide spectrum of BER components as well as DNA damage accumulation in atherosclerotic and non-atherosclerotic arteries. BER gene expression levels were analyzed in 162 carotid plaques, 8...... genes in atherosclerosis may contribute to lesional nuclear DNA stability but appears insufficient to maintain mtDNA integrity, potentially influencing mitochondrial function in cells within the atherosclerotic lesion....

  9. Interface Capacity of Repaired Concrete Columns Strengthened with RC Jackets

    Directory of Open Access Journals (Sweden)

    Achillopoulou Dimitra

    2014-12-01

    Full Text Available The study describes the retrofit of repaired elements by reinforced concrete (RC jacketing conducted to quantify the influence of initial construction deficiencies and of different type of anchors to the ability of the interface to transfer loads. Sixteen specimens (section scale 1:2 were designed with variables the initial deficiencies and the confinement ratio. The results indicate that: a the maximum resistance load and dissipated energy of initially damaged specimens are decreased; b surpassing a specific amount of damage, columns even suitably repaired present lower strain capacity, c welded bars lead to buckling of longitudinal bars.

  10. Estimating the effect of human base excision repair protein variants on the repair of oxidative DNA base damage.

    Science.gov (United States)

    Sokhansanj, Bahrad A; Wilson, David M

    2006-05-01

    Epidemiologic studies have revealed a complex association between human genetic variance and cancer risk. Quantitative biological modeling based on experimental data can play a critical role in interpreting the effect of genetic variation on biochemical pathways relevant to cancer development and progression. Defects in human DNA base excision repair (BER) proteins can reduce cellular tolerance to oxidative DNA base damage caused by endogenous and exogenous sources, such as exposure to toxins and ionizing radiation. If not repaired, DNA base damage leads to cell dysfunction and mutagenesis, consequently leading to cancer, disease, and aging. Population screens have identified numerous single-nucleotide polymorphism variants in many BER proteins and some have been purified and found to exhibit mild kinetic defects. Epidemiologic studies have led to conflicting conclusions on the association between single-nucleotide polymorphism variants in BER proteins and cancer risk. Using experimental data for cellular concentration and the kinetics of normal and variant BER proteins, we apply a previously developed and tested human BER pathway model to (i) estimate the effect of mild variants on BER of abasic sites and 8-oxoguanine, a prominent oxidative DNA base modification, (ii) identify ranges of variation associated with substantial BER capacity loss, and (iii) reveal nonintuitive consequences of multiple simultaneous variants. Our findings support previous work suggesting that mild BER variants have a minimal effect on pathway capacity whereas more severe defects and simultaneous variation in several BER proteins can lead to inefficient repair and potentially deleterious consequences of cellular damage.

  11. Base excision repair activities differ in human lung cancer cells and corresponding normal controls

    DEFF Research Database (Denmark)

    Karahalil, Bensu; Bohr, Vilhelm A; De Souza-Pinto, Nadja C

    2010-01-01

    Oxidative damage to DNA is thought to play a role in carcinogenesis by causing mutations, and indeed accumulation of oxidized DNA bases has been observed in samples obtained from tumors but not from surrounding tissue within the same patient. Base excision repair (BER) is the main pathway...... for the repair of oxidized modifications both in nuclear and mitochondrial DNA. In order to ascertain whether diminished BER capacity might account for increased levels of oxidative DNA damage in cancer cells, the activities of BER enzymes in three different lung cancer cell lines and their non......-cancerous counterparts were measured using oligonucleotide substrates with single DNA lesions to assess specific BER enzymes. The activities of four BER enzymes, OGG1, NTH1, UDG and APE1, were compared in mitochondrial and nuclear extracts. For each specific lesion, the repair activities were similar among the three...

  12. Individual capacity for DNA repair and maintenance of genomic integrity: a fertile ground for studies in the field of assisted reproduction

    Directory of Open Access Journals (Sweden)

    Radoslava Vazharova

    2016-05-01

    Full Text Available Many factors may affect the chances for successful pregnancy, especially at a later age. Fertility evaluations including genetic analysis are recommended to couples that have not achieved pregnancy within 6–12 months of unprotected intercourse. This review discusses some of the common polymorphisms in genes coding for proteins functioning in DNA damage identification and repair and maintenance of genomic integrity that may affect the chances of success in natural conception as well as in assisted reproduction (AR. Common polymorphisms in genes coding for proteins functioning in DNA damage identification and repair and maintenance of genomic integrity may affect the chances of success in assisted reproduction as well as in natural conception. The effects of carriership of different alleles of key genes of DNA repair may have differential effects in men and women and at different ages, suggesting complex interactions with the mechanisms controlling cell and tissue aging and programmed cell death. Future studies in the field are needed in order to elucidate the genotype–phenotype relationships and to translate the knowledge about individual repair capacity and maintenance of genomic integrity to potential clinical applications. Abbreviations: aCGH: microarray-based comparative genomic hybridization; AR: assisted reproduction; ATM: ataxia-telangiectasia mutated; ATP: adenosine triphosphate; BER: base excision repair; BFE: basic fertility evaluation; DMSO: dimethyl sulfoxide; FSH: follicle-stimulating hormone; GNRHR: gonadotropin-releasing hormone receptor; HMG: high-mobility group; ICSI: intracytoplasmic sperm injection; IUI: intrauterine insemination; IVF: in vitro fertilization; LH: luteinizing hormone; LIF: leukaemia inhibitory factor; MTR: methionine synthase; MTRR: methionine synthase reductase; NGS: next-generation sequencing; NER: nucleotide excision repair; NHEJ: non-homologous end joining; PAH: polycyclic aromatic hydrocarbons; PCOS

  13. [Study on repair capacity of DNA damage associated with chronic benzene poisoning].

    Science.gov (United States)

    Xing, Cai-hong; Ji, Zhi-ying; Li, Gui-lan; Yin, Song-nian

    2006-07-01

    To explore the repair capacity of DNA damage associated with chronic benzene poisonings. 63 workers suffered from chronic benzene poisonings and 45 workers exposed to benzene, who were engaged in the same job title, were investigated. Comet assay and cytokinesis-block micronucleus (CBMN) detection were used to evaluate gamma-radiation-induced DNA and chromosomal damage and repair capacity in peripheral blood lymphocyte. The comet tail length difference of the benzene poisoning group (4.64 +/- 1.57 microm) was significantly higher than that of the control group (3.77 +/- 1.30 microm) (P = 0.0029). There was no significant difference of the 3AB index between the poisoning group and the control group. The relative risk of benzene poisoning in the subject with comet tail length difference > 3.81 was significantly higher than that in the subject with comet tail length difference poisoning in the subject with 3AB index or = 0.20. DNA repair capacity on DNA-strand level might tightly associate with chronic benzene poisoning. The DNA repair capacity on DNA-strand level would be worse, and the benzene poisoning risk could be higher. There was no clear relation between the DNA repair capacity on chromosome level and the benzene poisoning risk.

  14. Impact of APEX Ile64val Gene Polymorphisms of DNA Repair Ber System on Modulation of the Risk of Colorectal Cancer in the Polish Population

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    Kabziński Jacek

    2015-03-01

    Full Text Available Colorectal cancer (CRC is one of the deadliest cancers which lie in the incidence of morbidity in second place. Intensive research is to determine and confirm the genetic basis of this disease, which is believed may have a direct relationship with the reduced efficiency of DNA repair systems.

  15. Base excision repair efficiency and mechanism in nuclear extracts are influenced by the ratio between volume of nuclear extraction buffer and nuclei-Implications for comparative studies

    DEFF Research Database (Denmark)

    Akbari, Mansour; Krokan, Hans E

    2012-01-01

    The base excision repair (BER) pathway corrects many different DNA base lesions and is important for genomic stability. The mechanism of BER cannot easily be investigated in intact cells and therefore in vitro methods that reflect the in vivo processes are in high demand. Reconstitution of BER...... using purified proteins essentially mirror properties of the proteins used, and does not necessarily reflect the mechanism as it occurs in the cell. Nuclear extracts from cultured cells have the capacity to carry out complete BER and can give important information on the mechanism. Furthermore...

  16. Difference in Membrane Repair Capacity Between Cancer Cell Lines and a Normal Cell Line.

    Science.gov (United States)

    Frandsen, Stine Krog; McNeil, Anna K; Novak, Ivana; McNeil, Paul L; Gehl, Julie

    2016-08-01

    Electroporation-based treatments and other therapies that permeabilize the plasma membrane have been shown to be more devastating to malignant cells than to normal cells. In this study, we asked if a difference in repair capacity could explain this observed difference in sensitivity. Membrane repair was investigated by disrupting the plasma membrane using laser followed by monitoring fluorescent dye entry over time in seven cancer cell lines, an immortalized cell line, and a normal primary cell line. The kinetics of repair in living cells can be directly recorded using this technique, providing a sensitive index of repair capacity. The normal primary cell line of all tested cell lines exhibited the slowest rate of dye entry after laser disruption and lowest level of dye uptake. Significantly, more rapid dye uptake and a higher total level of dye uptake occurred in six of the seven tested cancer cell lines (p normal cell line (98 % viable cells) was higher than in the three tested cancer cell lines (81-88 % viable cells). These data suggest more effective membrane repair in normal, primary cells and supplement previous explanations why electroporation-based therapies and other therapies permeabilizing the plasma membrane are more effective on malignant cells compared to normal cells in cancer treatment.

  17. Enhancement of DNA repair capacity of mammalian cells by carcinogen treatment

    Energy Technology Data Exchange (ETDEWEB)

    Protic, M.; Roilides, E.; Levine, A.S.; Dixon, K.

    1988-07-01

    To determine whether DNA excision repair is enhanced in mammalian cells in response to DNA damage, as it is in bacteria as part of the SOS response, we used an expression vector-host cell reactivation assay to measure cellular DNA repair capacity. When UV-damaged chloramphenicol acetyltransferase (CAT) vector DNA was introduced into monkey cells (CV-1), the level of CAT activity was inversely related to the UV fluence due to inhibition of CAT gene expression by UV photoproducts. When CV-1 cells were treated with either UV radiation or mitomycin C, 24-48 h before transfection, CAT expression from the UV-irradiated plasmid was increased. This increase also occurred in a line of normal human cells, but not in repair-deficient human xeroderma pigmentosum cells. We confirmed that this increase in CAT expression was due to repair, and not to production of damage-free templates by recombination; the frequency of generation of supF+ recombinants after transfection with UV-irradiated pZ189 vectors carrying different point mutations in the supF gene did not significantly increase in carcinogen-treated CV-1 cells. From these results we conclude that carcinogen treatment enhances the excision-repair capacity of normal mammalian cells.

  18. The effect of aging on the DNA damage and repair capacity in 2BS cells undergoing oxidative stress.

    Science.gov (United States)

    Wang, Jin-Ling; Wang, Pei-Chang

    2012-01-01

    Aging is associated with a reduction in the DNA repair capacity under oxidative stress. However, whether the DNA damage and repair capacity can be a biomarker of aging remains controversial. In this study, we demonstrated two cause-and-effect relationships, the one is between the DNA damage and repair capacity and the cellular age, another is between DNA damage and repair capacity and the level of oxidative stress in human embryonic lung fibroblasts (2BS) exposed to different doses of hydrogen peroxide (H2O2). To clarify the mechanisms of the age-related reduction in DNA damage and repair capacity, we preliminarily evaluated the expressions of six kinds of pivotal enzymes involved in the two classical DNA repair pathways. The DNA repair capacity was observed in human fibroblasts cells using the comet assay; the age-related DNA repair enzymes were selected by RT-PCR and then verified by Western blot in vitro. Results showed that the DNA repair capacity was negatively and linearly correlated with (i) cumulative population doubling (PD) levels only in the group of low concentration of hydrogen peroxide treatment, (ii) with the level of oxidative stress only in the group of young PD cells. The mRNA expression of DNA polymerase δ1 decreased substantially in senescent cells and showed negative linear-correlation with PD levels; the protein expression level was well consistent with the mRNA level. Taken together, DNA damage and repair capacity can be a biomarker of aging. Reduced expression of DNA polymerase δ1 may be responsible for the decrease of DNA repair capacity in senescent cells.

  19. Robust Cognitive-GN BER Estimator for Dynamic WDM Networks

    DEFF Research Database (Denmark)

    Borkowski, Robert; Caballero Jambrina, Antonio; Arlunno, Valeria;

    2014-01-01

    We introduce and experimentally demonstrate a simple yet reliable and fast tool for estimating BER of lightpaths over uncompensated links. The model provides accurate estimates for capacity upgrade scenarios when modulation format order is increased....

  20. Difference in membrane repair capacity between cancer cell lines and a normal cell line

    DEFF Research Database (Denmark)

    Frandsen, Stine Krog; McNeil, Anna K.; Novak, Ivana

    2016-01-01

    Electroporation-based treatments and other therapies that permeabilize the plasma membrane have been shown to be more devastating to malignant cells than to normal cells. In this study, we asked if a difference in repair capacity could explain this observed difference in sensitivity. Membrane...... repair was investigated by disrupting the plasma membrane using laser followed by monitoring fluorescent dye entry over time in seven cancer cell lines, an immortalized cell line, and a normal primary cell line. The kinetics of repair in living cells can be directly recorded using this technique...... cancer cell lines (p cell line (p membrane permeabilization by electroporation. Viability in the primary normal cell line (98 % viable cells) was higher...

  1. DNA Double Strand Break Response and Limited Repair Capacity in Mouse Elongated Spermatids

    Directory of Open Access Journals (Sweden)

    Emad A. Ahmed

    2015-12-01

    Full Text Available Spermatids are extremely sensitive to genotoxic exposures since during spermiogenesis only error-prone non homologous end joining (NHEJ repair pathways are available. Hence, genomic damage may accumulate in sperm and be transmitted to the zygote. Indirect, delayed DNA fragmentation and lesions associated with apoptotic-like processes have been observed during spermatid elongation, 27 days after irradiation. The proliferating spermatogonia and early meiotic prophase cells have been suggested to retain a memory of a radiation insult leading later to this delayed fragmentation. Here, we used meiotic spread preparations to localize phosphorylate histone H2 variant (γ-H2AX foci marking DNA double strand breaks (DSBs in elongated spermatids. This technique enabled us to determine the background level of DSB foci in elongated spermatids of RAD54/RAD54B double knockout (dko mice, severe combined immunodeficiency SCID mice, and poly adenosine diphosphate (ADP-ribose polymerase 1 (PARP1 inhibitor (DPQ-treated mice to compare them with the appropriate wild type controls. The repair kinetics data and the protein expression patterns observed indicate that the conventional NHEJ repair pathway is not available for elongated spermatids to repair the programmed and the IR-induced DSBs, reflecting the limited repair capacity of these cells. However, although elongated spermatids express the proteins of the alternative NHEJ, PARP1-inhibition had no effect on the repair kinetics after IR, suggesting that DNA damage may be passed onto sperm. Finally, our genetic mutant analysis suggests that an incomplete or defective meiotic recombinational repair of Spo11-induced DSBs may lead to a carry-over of the DSB damage or induce a delayed nuclear fragmentation during the sensitive programmed chromatin remodeling occurring in elongated spermatids.

  2. Autologous hematopoietic stem cell transplantation in lymphoma patients is associated with a decrease in the double strand break repair capacity of peripheral blood lymphocytes.

    Science.gov (United States)

    Lacoste, Sandrine; Bhatia, Smita; Chen, Yanjun; Bhatia, Ravi; O'Connor, Timothy R

    2017-01-01

    Patients who undergo autologous hematopoietic stem cell transplantation (aHCT) for treatment of a relapsed or refractory lymphoma are at risk of developing therapy related- myelodysplasia/acute myeloid leukemia (t-MDS/AML). Part of the risk likely resides in inherent interindividual differences in their DNA repair capacity (DRC), which is thought to influence the effect chemotherapeutic treatments have on the patient's stem cells prior to aHCT. Measuring DRC involves identifying small differences in repair proficiency among individuals. Initially, we investigated the cell model in healthy individuals (primary lymphocytes and/or lymphoblastoid cell lines) that would be appropriate to measure genetically determined DRC using host-cell reactivation assays. We present evidence that interindividual differences in DRC double-strand break repair (by non-homologous end-joining [NHEJ] or single-strand annealing [SSA]) are better preserved in non-induced primary lymphocytes. In contrast, lymphocytes induced to proliferate are required to assay base excision (BER) or nucleotide excision repair (NER). We established that both NHEJ and SSA DRCs in lymphocytes of healthy individuals were inversely correlated with the age of the donor, indicating that DSB repair in lymphocytes is likely not a constant feature but rather something that decreases with age (~0.37% NHEJ DRC/year). To investigate the predictive value of pre-aHCT DRC on outcome in patients, we then applied the optimized assays to the analysis of primary lymphocytes from lymphoma patients and found that individuals who later developed t-MDS/AML (cases) were indistinguishable in their DRC from controls who never developed t-MDS/AML. However, when DRC was investigated shortly after aHCT in the same individuals (21.6 months later on average), aHCT patients (both cases and controls) showed a significant decrease in DSB repair measurements. The average decrease of 6.9% in NHEJ DRC observed among aHCT patients was much higher

  3. Autologous hematopoietic stem cell transplantation in lymphoma patients is associated with a decrease in the double strand break repair capacity of peripheral blood lymphocytes

    Science.gov (United States)

    Lacoste, Sandrine; Bhatia, Smita; Chen, Yanjun; Bhatia, Ravi; O’Connor, Timothy R.

    2017-01-01

    Patients who undergo autologous hematopoietic stem cell transplantation (aHCT) for treatment of a relapsed or refractory lymphoma are at risk of developing therapy related- myelodysplasia/acute myeloid leukemia (t-MDS/AML). Part of the risk likely resides in inherent interindividual differences in their DNA repair capacity (DRC), which is thought to influence the effect chemotherapeutic treatments have on the patient’s stem cells prior to aHCT. Measuring DRC involves identifying small differences in repair proficiency among individuals. Initially, we investigated the cell model in healthy individuals (primary lymphocytes and/or lymphoblastoid cell lines) that would be appropriate to measure genetically determined DRC using host-cell reactivation assays. We present evidence that interindividual differences in DRC double-strand break repair (by non-homologous end-joining [NHEJ] or single-strand annealing [SSA]) are better preserved in non-induced primary lymphocytes. In contrast, lymphocytes induced to proliferate are required to assay base excision (BER) or nucleotide excision repair (NER). We established that both NHEJ and SSA DRCs in lymphocytes of healthy individuals were inversely correlated with the age of the donor, indicating that DSB repair in lymphocytes is likely not a constant feature but rather something that decreases with age (~0.37% NHEJ DRC/year). To investigate the predictive value of pre-aHCT DRC on outcome in patients, we then applied the optimized assays to the analysis of primary lymphocytes from lymphoma patients and found that individuals who later developed t-MDS/AML (cases) were indistinguishable in their DRC from controls who never developed t-MDS/AML. However, when DRC was investigated shortly after aHCT in the same individuals (21.6 months later on average), aHCT patients (both cases and controls) showed a significant decrease in DSB repair measurements. The average decrease of 6.9% in NHEJ DRC observed among aHCT patients was much

  4. BER Science Network Requirements

    Energy Technology Data Exchange (ETDEWEB)

    Alapaty, Kiran; Allen, Ben; Bell, Greg; Benton, David; Brettin, Tom; Canon, Shane; Dart, Eli; Cotter, Steve; Crivelli, Silvia; Carlson, Rich; Dattoria, Vince; Desai, Narayan; Egan, Richard; Tierney, Brian; Goodwin, Ken; Gregurick, Susan; Hicks, Susan; Johnston, Bill; de Jong, Bert; Kleese van Dam, Kerstin; Livny, Miron; Markowitz, Victor; McGraw, Jim; McCord, Raymond; Oehmen, Chris; Regimbal, Kevin; Shipman, Galen; Strand, Gary; Flick, Jeff; Turnbull, Susan; Williams, Dean; Zurawski, Jason

    2010-11-01

    The Energy Sciences Network (ESnet) is the primary provider of network connectivity for the US Department of Energy Office of Science, the single largest supporter of basic research in the physical sciences in the United States. In support of the Office of Science programs, ESnet regularly updates and refreshes its understanding of the networking requirements of the instruments, facilities, scientists, and science programs that it serves. This focus has helped ESnet to be a highly successful enabler of scientific discovery for over 20 years. In April 2010 ESnet and the Office of Biological and Environmental Research, of the DOE Office of Science, organized a workshop to characterize the networking requirements of the science programs funded by BER. The requirements identified at the workshop are summarized and described in more detail in the case studies and the Findings section. A number of common themes emerged from the case studies and workshop discussions. One is that BER science, like many other disciplines, is becoming more and more distributed and collaborative in nature. Another common theme is that data set sizes are exploding. Climate Science in particular is on the verge of needing to manage exabytes of data, and Genomics is on the verge of a huge paradigm shift in the number of sites with sequencers and the amount of sequencer data being generated.

  5. 5. MUTAGEN SENSITIVITY AND DNA REPAIR CAPACITY (DRC) AS RISK FACTORS FOR NON-SMALL CELL LUNG CANCER

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    @@An alkaline single cell gel electrophoresis assay has been standardised by which mutagen sensitivity and DNA repair capacity (DRC) can be measured in cryopreserved peripheral blood lymphocytes following induction and repair of DNA damage induced by bleomycin. In an ongoing case-control study, we have applied this assay to Caucasian

  6. Modulation of DNA base excision repair during neuronal differentiation

    DEFF Research Database (Denmark)

    Sykora, Peter; Yang, Jenq-Lin; Ferrarelli, Leslie K

    2013-01-01

    Neurons are terminally differentiated cells with a high rate of metabolism and multiple biological properties distinct from their undifferentiated precursors. Previous studies showed that nucleotide excision DNA repair is downregulated in postmitotic muscle cells and neurons. Here, we characterize...... DNA damage susceptibility and base excision DNA repair (BER) capacity in undifferentiated and differentiated human neural cells. The results show that undifferentiated human SH-SY5Y neuroblastoma cells are less sensitive to oxidative damage than their differentiated counterparts, in part because...

  7. Estrogen Receptor Expression Is Associated with DNA Repair Capacity in Breast Cancer.

    Directory of Open Access Journals (Sweden)

    Jaime Matta

    Full Text Available Estrogen-receptor-positive (ER+ tumors employ complex signaling that engages in crosstalk with multiple pathways through genomic and non-genomic regulation. A greater understanding of these pathways is important for developing improved biomarkers that can better determine treatment choices, risk of recurrence and cancer progression. Deficiencies in DNA repair capacity (DRC is a hallmark of breast cancer (BC; therefore, in this work we tested whether ER signaling influences DRC. We analyzed the association between ER positivity (% receptor activation and DRC in 270 BC patients, then further stratified our analysis by HER2 receptor status. Our results show that among HER2 negative, the likelihood of having low DRC values among ER- women is 1.92 (95% CI: 1.03, 3.57 times the likelihood of having low DRC values among ER+ women, even adjusting for different potential confounders (p<0.05; however, a contrary pattern was observed among HER2 positives women. In conclusion, there is an association between DRC levels and ER status, and this association is modified by HER2 receptor status. Adding a DNA repair capacity test to hormone receptor testing may provide new information on defective DNA repair phenotypes, which could better stratify BC patients who have ER+ tumors. ER+/HER2- tumors are heterogeneous, incompletely defined, and clinically challenging to treat; the addition of a DRC test could better characterize and classify these patients as well as help clinicians select optimal therapies, which could improve outcomes and reduce recurrences.

  8. Maintenance of xylem network transport capacity: a review of embolism repair in vascular plants

    Directory of Open Access Journals (Sweden)

    Craig eBrodersen

    2013-04-01

    Full Text Available Maintenance of long distance water transport in xylem is essential to plant health and productivity. Both biotic and abiotic environmental conditions lead to embolism formation within the xylem resulting in lost transport capacity and ultimately death. Plants exhibit a variety of strategies to either prevent or restore hydraulic capacity through cavitation resistance with specialized anatomy, replacement of compromised conduits with new growth, and a metabolically active embolism repair mechanism. In recent years, mounting evidence suggests that metabolically active cells surrounding the xylem conduits in some, but not all, species are capable of restoring hydraulic conductivity. This review summarizes our current understanding of the osmotically driven embolism repair mechanism, the known genetic and anatomical components related to embolism repair, rehydration pathways through the xylem, and the role of capacitance. Anatomical differences between functional plant groups may be one of the limiting factors that allow some plants to refill while others do not, but further investigations are necessary to fully understand this dynamic process. Finally, xylem networks should no longer be considered an assemblage of dead, empty conduits, but instead a metabolically active tissue finely tuned to respond to ever changing environmental cues.

  9. Exercise capacity, physical activity, and obesity in adults with repaired aortic coarctation.

    Science.gov (United States)

    Buys, Roselien; Budts, Werner; Delecluse, Christophe; Vanhees, Luc

    2013-01-01

    Patients with aortic coarctation (COA) have a reduced exercise capacity and seem to be more prone to adopt a sedentary lifestyle. During clinical practice, we often observe that patients seem to be overweight. However, data on physical activity and weight status in this population are currently not available. This study aimed to describe weight status, self-reported physical activity levels, and self-perceived health status in adults with repaired COA in comparison with healthy counterparts and to investigate the relationships among exercise capacity, physical activity, weight status, and perceived health status. We studied 103 COA patients who underwent cardiopulmonary exercise testing and who completed the Flemish Physical Activity Computerized Questionnaire and the short-form 36 health survey questionnaire. Patients with COA show a significantly lower exercise tolerance than what would be expected in healthy persons (P physical activity (P physical activity are related to exercise capacity (total energy expenditure: r = 0.278, P = .0015). The more active COA patients report higher scores of perceived physical functioning, general health, and mental health. Overweight patients did not perform significantly different than patients with a healthy weight did. Adults with repaired COA have a reduced exercise tolerance, which is related to low physical activity levels. Up to one-third of the COA patients we studied are overweight. As a poor exercise capacity identifies patients at risk for hospitalization and death and obesity might adversely influence the development of cardiovascular disease, it is important to improve the exercise capacity in these patients. Guiding patients toward more physical activity in daily life might therefore be the number 1 preventive measure to be taken in this patient group.

  10. A modified fluorimetric host cell reactivation assay to determine the repair capacity of primary keratinocytes, melanocytes and fibroblasts

    Directory of Open Access Journals (Sweden)

    Gebhard Daniel

    2010-06-01

    Full Text Available Abstract Background The Host Cell Reactivation Assay (HCRA is widely used to identify circumstances and substances affecting the repair capacity of cells, however, it is restricted by the transfection procedure used and the sensitivity of the detection method. Primary skin cells are particularly difficult to transfect, and therefore sensitive methods are needed to detect any variations due to the cell-type or inter-individual differences or changes induced by diverse substances. A sensitive and repeatable method to detect the repair capacity of skin cells would be useful in two different aspects: On the one hand, to identify substances influencing the repair capacity in a positive manner (these substances could be promising ingredients for cosmetic products and on the other hand, to exclude the negative effects of substances on the repair capacity (this could serve as one step further towards replacing or at least reducing animal testing. Results In this paper, we present a rapid and sensitive assay to determine the repair capacity of primary keratinocytes, melanocytes and fibroblasts based on two wave-length Green Fluorescent Protein (GFP and DsRed reporter technology in order to test different substances and their potential to influence the DNA repair capacity. For the detection of plasmid restoration, we used FACS technology, which, in comparison to luminometer technology, is highly sensitive and allows single cell based analysis. The usefulness of this assay and studying the repair capacity is demonstrated by the evidence that DNA repair is repressed by Cyclosporin A in fibroblasts. Conclusions The methodology described in this paper determines the DNA repair capacity in different types of human skin cells. The described transfection protocol is suitable for the transfection of melanocytes, keratinocytes and fibroblasts, reaching efficacies suitable for the detection of the restored plasmids by FACS technology. Therefore the repair capacity

  11. Signalling pathways that inhibit the capacity of precursor cells for myelin repair.

    Science.gov (United States)

    Sabo, Jennifer K; Cate, Holly S

    2013-01-07

    In demyelinating disorders such as Multiple Sclerosis (MS), targets of injury are myelin and oligodendrocytes, leading to severe neurological dysfunction. Regenerative therapies aimed at promoting oligodendrocyte maturation and remyelination are promising strategies for treatment in demyelinating disorders. Endogenous precursor cells or exogenous transplanted cells are potential sources for remyelinating oligodendrocytes in the central nervous system (CNS). Several signalling pathways have been implicated in regulating the capacity of these cell populations for myelin repair. Here, we review neural precursor cells and oligodendrocyte progenitor cells as potential sources for remyelinating oligodendrocytes and evidence for the functional role of key signalling pathways in inhibiting regeneration from these precursor cell populations.

  12. Signalling Pathways that Inhibit the Capacity of Precursor Cells for Myelin Repair

    Directory of Open Access Journals (Sweden)

    Jennifer K. Sabo

    2013-01-01

    Full Text Available In demyelinating disorders such as Multiple Sclerosis (MS, targets of injury are myelin and oligodendrocytes, leading to severe neurological dysfunction. Regenerative therapies aimed at promoting oligodendrocyte maturation and remyelination are promising strategies for treatment in demyelinating disorders. Endogenous precursor cells or exogenous transplanted cells are potential sources for remyelinating oligodendrocytes in the central nervous system (CNS. Several signalling pathways have been implicated in regulating the capacity of these cell populations for myelin repair. Here, we review neural precursor cells and oligodendrocyte progenitor cells as potential sources for remyelinating oligodendrocytes and evidence for the functional role of key signalling pathways in inhibiting regeneration from these precursor cell populations.

  13. DNA repair capacity and acute radiotherapy adverse effects in Italian breast cancer patients

    Energy Technology Data Exchange (ETDEWEB)

    Sterpone, Silvia; Cornetta, Tommaso [Department of Biology, University of ' Roma TRE' , V.le G. Marconi 446, Rome 00146 (Italy); Padua, Luca [' Don Carlo Gnocchi' Foundation, Rome (Italy); Mastellone, Valeria [Department of Biology, University of ' Roma TRE' , V.le G. Marconi 446, Rome 00146 (Italy); Giammarino, Daniela [' S. Camillo-Forlanini' Hospital, Radiation Oncology Unit, Rome (Italy); Testa, Antonella; Tirindelli, Donatella [Toxicology and Biomedical Sciences Section, ENEA, Casaccia, Rome (Italy); Cozzi, Renata, E-mail: cozzi@uniroma3.it [Department of Biology, University of ' Roma TRE' , V.le G. Marconi 446, Rome 00146 (Italy); Donato, Vittorio [' S. Camillo-Forlanini' Hospital, Radiation Oncology Unit, Rome (Italy)

    2010-02-03

    Therapeutic exposure to ionising radiation can induce normal tissue side effects which consistently differ among individuals suggesting a possible genetic control. One approach to elucidate the underlying mechanisms is to analyse the relation between genetic traits, biomarkers of in vitro DNA damage and side toxicity in vivo. 43 breast cancer (BC) patients receiving radiotherapy after a breast-conserving surgery were recruited together with 34 age- and sex-matched healthy controls. Adverse tissue reactions were recorded as indicators of radiotherapy susceptibility. All blood samples from both patients (35) and controls (34) were irradiated in vitro and DNA primary damage and repair kinetic were measured through Comet assay. All study subjects were genotyped for XRCC1, OGG1 and XRCC3 gene polymorphisms. In our small groups we found a positive association between XRCC1 variant allele (399Gln) and the occurrence of breast cancer [p = 0.01; OR = 2.41, 95%CI (1.24-4.66)]. BC patients showed a higher degree of basal (p < 0.001) and X-ray induced DNA damage (p < 0.01) when compared to healthy controls. A reduced repair ability was found in BC patients showing high degrees of tissue side effects as classified by Radiation Morbidity Scoring Scheme. BC patients showed an impairment of their DNA repair capacity associated with the development of radiation sensitivity but not with polymorphisms in any of the considered genes.

  14. DNA repair and replication links to pluripotency and differentiation capacity of pig iPS cells

    Science.gov (United States)

    Song, Lipu; Fan, Anran; Zhang, Sheng; Wang, Jianyu; Fan, Nana; Liu, Na; Ye, Xiaoying; Fu, Haifeng; Zhou, Zhongcheng; Wang, Yong; Wei, Hong; Liu, Zhonghua; Li, Ziyi; Lai, Liangxue; Wang, Xumin; Liu, Lin

    2017-01-01

    Pigs are proposed to be suitable large animal models for test of the efficacy and safety of induced pluripotent stem cells (iPSCs) for stem cell therapy, but authentic pig ES/iPS cell lines with germline competence are rarely produced. The pathways or signaling underlying the defective competent pig iPSCs remain poorly understood. By improving induction conditions using various small chemicals, we generated pig iPSCs that exhibited high pluripotency and differentiation capacity that can contribute to chimeras. However, their potency was reduced with increasing passages by teratoma formation test, and correlated with declined expression levels of Rex1, an important marker for naïve state. By RNA-sequencing analysis, genes related to WNT signaling were upregulated and MAPK signaling and TGFβ pathways downregulated in pig iPSCs compared to fibroblasts, but they were abnormally expressed during passages. Notably, pathways involving in DNA repair and replication were upregulated at early passage, but downregulated in iPSCs during prolonged passage in cluster with fibroblasts. Our data suggests that reduced DNA repair and replication capacity links to the instability of pig iPSCs. Targeting these pathways may facilitate generation of truly pluripotent pig iPSCs, with implication in translational studies. PMID:28253351

  15. Wound repair and anti-oxidative capacity is regulated by ITGB4 in airway epithelial cells.

    Science.gov (United States)

    Liu, Chi; Liu, Hui-jun; Xiang, Yang; Tan, Yu-rong; Zhu, Xiao-lin; Qin, Xiao-qun

    2010-08-01

    Integrin beta 4 (ITGB4) is a structural adhesion molecule which engages in maintaining the integrity of airway epithelial cells. Its specific cytomembrane structural feature strongly indicates that ITGB4 may engage in many signaling pathways and physiologic processes. However, in addition to adhesion, the specific biologic significance of ITGB4 in airway epithelial cells is almost unknown. In this article, we investigated the expression and functional properties of ITGB4 in airway epithelial cells in vivo and in vitro. Human bronchial epithelial cell line (16HBE14O-cells) and primary rat tracheal epithelial cells (RTE cells) were used to determine ITGB4 expression under ozone tress or mechanical damage, respectively. An ovalbumin (OVA)-challenged asthma model was used to investigate ITGB4 expression after antigen exposure in vivo. In addition, an ITGB4 overexpression vector and ITGB4 silence virus vector were constructed and transfected into RTE cells. Then, wound repair ability and anti-oxidation capacity was evaluated. Our results demonstrated that, on the edge of mechanically wounded cell areas, ITGB4 expression was increased after mechanical injury. After ozone stress, upregulation expression of ITGB4 was also detected. In the OVA-challenged asthma model, ITGB4 expression was decreased on airway epithelial cells accompanying with structural disruption and damage of anti-oxidation capacity. Besides, our study revealed that upregulation of ITGB4 promotes wound repair ability and anti-oxidative ability, while such abilities were blocked when ITGB4 was silenced. Taken together, these results showed that ITGB4 was a new interesting molecule involved in the regulation of wound repair and anti-oxidation processes for airway epithelial cells.

  16. Evaluation of radioinduced damage and repair capacity in blood lymphocytes of breast cancer patients

    Directory of Open Access Journals (Sweden)

    P.A. Nascimento

    2001-02-01

    Full Text Available Genetic damage caused by ionizing radiation and repair capacity of blood lymphocytes from 3 breast cancer patients and 3 healthy donors were investigated using the comet assay. The comets were analyzed by two parameters: comet tail length and visual classification. Blood samples from the donors were irradiated in vitro with a 60Co source at a dose rate of 0.722 Gy/min, with a dose range of 0.2 to 4.0 Gy and analyzed immediately after the procedure and 3 and 24 h later. The basal level of damage and the radioinduced damage were higher in lymphocytes from breast cancer patients than in lymphocytes from healthy donors. The radioinduced damage showed that the two groups had a similar response when analyzed immediately after the irradiations. Therefore, while the healthy donors presented a considerable reduction of damage after 3 h, the patients had a higher residual damage even 24 h after exposure. The repair capacity of blood lymphocytes from the patients was slower than that of lymphocytes from healthy donors. The possible influence of age, disease stage and mutations in the BRCA1 and BRCA2 genes are discussed. Both parameters adopted proved to be sensitive and reproducible: the dose-response curves for DNA migration can be used not only for the analysis of cellular response but also for monitoring therapeutic interventions. Lymphocytes from the breast cancer patients presented an initial radiosensitivity similar to that of healthy subjects but a deficient repair mechanism made them more vulnerable to the genotoxic action of ionizing radiation. However, since lymphocytes from only 3 patients and 3 normal subjects were analyzed in the present paper, additional donors will be necessary for a more accurate evaluation.

  17. Ku80-deleted cells are defective at base excision repair

    Energy Technology Data Exchange (ETDEWEB)

    Li, Han [The University of Texas Health Science Center at San Antonio, The Institute of Biotechnology, The Department of Molecular Medicine, 15355 Lambda Drive, San Antonio, TX 78245-3207 (United States); Tumor Suppression Group, Spanish National Cancer Research Centre (CNIO), Madrid 28029 (Spain); Marple, Teresa [The University of Texas Health Science Center at San Antonio, The Institute of Biotechnology, The Department of Molecular Medicine, 15355 Lambda Drive, San Antonio, TX 78245-3207 (United States); Hasty, Paul, E-mail: hastye@uthscsa.edu [The University of Texas Health Science Center at San Antonio, The Institute of Biotechnology, The Department of Molecular Medicine, 15355 Lambda Drive, San Antonio, TX 78245-3207 (United States); Tumor Suppression Group, Spanish National Cancer Research Centre (CNIO), Madrid 28029 (Spain)

    2013-05-15

    Graphical abstract: - Highlights: • Ku80-deleted cells are hypersensitive to ROS and alkylating agents. • Cells deleted for Ku80, but not Ku70 or Lig4, have reduced BER capacity. • OGG1 rescues hypersensitivity to H{sub 2}O{sub 2} and paraquat in Ku80-mutant cells. • Cells deleted for Ku80, but not Lig4, are defective at repairing AP sites. • Cells deleted for Ku80, but not Lig4 or Brca2 exon 27, exhibit increased PAR. - Abstract: Ku80 forms a heterodimer with Ku70, called Ku, that repairs DNA double-strand breaks (DSBs) via the nonhomologous end joining (NHEJ) pathway. As a consequence of deleting NHEJ, Ku80-mutant cells are hypersensitive to agents that cause DNA DSBs like ionizing radiation. Here we show that Ku80 deletion also decreased resistance to ROS and alkylating agents that typically cause base lesions and single-strand breaks (SSBs). This is unusual since base excision repair (BER), not NHEJ, typically repairs these types of lesions. However, we show that deletion of another NHEJ protein, DNA ligase IV (Lig4), did not cause hypersensitivity to these agents. In addition, the ROS and alkylating agents did not induce γ-H2AX foci that are diagnostic of DSBs. Furthermore, deletion of Ku80, but not Lig4 or Ku70, reduced BER capacity. Ku80 deletion also impaired BER at the initial lesion recognition/strand scission step; thus, involvement of a DSB is unlikely. Therefore, our data suggests that Ku80 deletion impairs BER via a mechanism that does not repair DSBs.

  18. “Über-Coca”, “Über-Sex”, “Über-Nothingness”

    Directory of Open Access Journals (Sweden)

    Mario Vrbančić

    2015-12-01

    Full Text Available “Über-Coca”, “Über-Sex” and “Über-Nothingness” are metaphors of certain aggregate states: “Über-Coca” refers to Freud's experiments with cocaine, an open possibility of pharmatizing the conception as well as the entirety of psychoanalysis; “Über-Sex” is a constant need of not only controlling, and regulating sexuality, but of using it in production itself, as a particular sort of engine of productive forces; »Über-Nothingness” refers to borderline situations produced in such a control, ontological uncertainties only vaguely discernible from today’s vantage point. This essay tries to answer the question of how these “übers” permeate each other in creation of new sexual identities in the twenty-first century. First part of the essay deals with genesis of biopower which was mapped by Paul Beatriz Preciado in his work Testo Junkie: Sex, Drugs and Biopolitics in the Pharmacopornographic Era. After a brief overview of this type of biopower and capitalism, we are led to the ontological concept on which Preciado concieves his argument regarding pharmaceutical-pornographic capitalism. The issue discussed here is a concept referred to as potentia gaudendi, an orgasmic force which cannot be channeled, which is neither male nor female, a neuter, which permeates the animal realm, too, even the inorganic, therefore, it can almost be understood as a cosmic orgasmic force. Second part of the essay asks the question regarding the ontological merit of potentia gaudendi comparing it to another phantasm of the workings of financial capitalism as portrayed by Martin Scorsese's movie The Wolf of Wall Street, with a focus on analysis of the very performativity of ontological uncertainty which constantly returns. By criticizing Preciado and his/her reading of Lacan, the essay deals with “Über-Nothingness«, which seems to appear only at the end of the linear progressive sequence of »Über-Coca”, “Über-Sex”, “Über

  19. Mitteilungen über Zaglossus

    NARCIS (Netherlands)

    Kerbert, C.

    1913-01-01

    In den Sitzungen der „Nederlandsche Dierkundige Vereeniging” d.d. 25 März und 30 Sept. 1911 und in der biologischen Abteilung des „XVe Vlaamsch Natuur- en Geneeskundig Congres” zu Oostende am 10en Sept. 1911 (1) war ich in der Lage kurze Mitteilungen zu machen über zwei Langschnabeligel (Zaglossus

  20. Mitteilungen über Zaglossus

    NARCIS (Netherlands)

    Kerbert, C.

    1913-01-01

    In den Sitzungen der „Nederlandsche Dierkundige Vereeniging” d.d. 25 März und 30 Sept. 1911 und in der biologischen Abteilung des „XVe Vlaamsch Natuur- en Geneeskundig Congres” zu Oostende am 10en Sept. 1911 (1) war ich in der Lage kurze Mitteilungen zu machen über zwei Langschnabeligel (Zaglossus G

  1. Women with endometriosis have a higher DNA repair capacity and diminished breast cancer risk

    Science.gov (United States)

    Matta, Jaime L.; Flores, Idhaliz; Morales, Luisa M.; Monteiro, Janice; Alvarez-Garriga, Carolina; Bayona, Manuel

    2014-01-01

    Introduction Breast cancer (BC) and endometriosis are important reproductive health diseases for women. Although endometriosis is not a malignant condition, some of its characteristics mimic that of a malignancy. Endometriosis is associated with increased risk of certain cancers; however, whether it alters BC risk is unclear. This study evaluates the association of endometriosis and BC and explores whether DNA repair capacity (DRC) plays a role in such a relationship. Materials and Methods A case-control study of 991 women (385 with BC and 606 controls, all recruited over 5 years) was undertaken in Puerto Rico. Eighty participants with self-reported surgically diagnosed endometriosis were identified, 20 of whom also had a diagnosis of BC. Data from a structured questionnaire and DRC measurements were assessed to determine the association between BC, DRC, and endometriosis. Results Participants with BC cases were 50% less likely to have history of endometriosis (OR = 0.5 95%CI: 0.3, 0.9, p = 0.038) than women without BC controls. Findings that did not reach statistical significance included the following: women with history of endometriosis had a slightly higher DRC level than those without it; BC cases and history of endometriosis were less likely to have had endometriosis diagnosis before age 38 as compared to controls with endometriosis. Discussion Here we report an inverse association between endometriosis and BC, the former possibly conferring a protective effect on the latter. Although the mechanisms involved are unknown they may include protection provided by higher DRC and or hormonal treatments for endometriosis. A larger sample of endometriosis cases is necessary to confirm these results and answer the question of whether a higher DRC capacity may contribute to this potential protection, and to identify other factors at play. PMID:25473592

  2. DNA repair activity in fish and interest in ecotoxicology: a review.

    Science.gov (United States)

    Kienzler, Aude; Bony, Sylvie; Devaux, Alain

    2013-06-15

    The knowledge of DNA repair in a target species is of first importance as it is the primary line of defense against genotoxicants, and a better knowledge of DNA repair capacity in fish could help to interpret genotoxicity data and/or assist in the choice of target species, developmental stage and tissues to focus on, both for environmental biomonitoring studies and DNA repair testing. This review focuses in a first part on what is presently known on a mechanistic basis, about the various DNA repair systems in fish, in vivo and in established cell lines. Data on base excision repair (BER), direct reversal with O⁶-alkylguanine transferase and double strand breaks repair, although rather scarce, are being reviewed, as well as nucleotide excision repair (NER) and photoreactivation repair (PER), which are by far the most studied repair mechanisms in fish. Most of these repair mechanisms seem to be strongly species and tissue dependent; they also depend on the developmental stage of the organisms. BER is efficient in vivo, although no data has been found on in vitro models. NER activity is quite low or even inexistent depending on the studies; however this lack is partly compensated by a strong PER activity, especially in early developmental stage. In a second part, a survey of the ecotoxicological studies integrating DNA repair as a parameter responding to single or mixture of contaminant is realized. Three main approaches are being used: the measurement of DNA repair gene expression after exposure, although it has not yet been clearly established whether gene expression is indicative of repair capacity; the monitoring of DNA damage removal by following DNA repair kinetics; and the modulation of DNA repair activity following exposure in situ, in order to assess the impact of exposure history on DNA repair capacity. Since all DNA repair processes are possible targets for environmental pollutants, we can also wonder at which extent such a modulation of repair capacities

  3. A quantitative model of human DNA base excision repair. I. Mechanistic insights.

    Science.gov (United States)

    Sokhansanj, Bahrad A; Rodrigue, Garry R; Fitch, J Patrick; Wilson, David M

    2002-04-15

    Base excision repair (BER) is a multistep process involving the sequential activity of several proteins that cope with spontaneous and environmentally induced mutagenic and cytotoxic DNA damage. Quantitative kinetic data on single proteins of BER have been used here to develop a mathematical model of the BER pathway. This model was then employed to evaluate mechanistic issues and to determine the sensitivity of pathway throughput to altered enzyme kinetics. Notably, the model predicts considerably less pathway throughput than observed in experimental in vitro assays. This finding, in combination with the effects of pathway cooperativity on model throughput, supports the hypothesis of cooperation during abasic site repair and between the apurinic/apyrimidinic (AP) endonuclease, Ape1, and the 8-oxoguanine DNA glycosylase, Ogg1. The quantitative model also predicts that for 8-oxoguanine and hydrolytic AP site damage, short-patch Polbeta-mediated BER dominates, with minimal switching to the long-patch subpathway. Sensitivity analysis of the model indicates that the Polbeta-catalyzed reactions have the most control over pathway throughput, although other BER reactions contribute to pathway efficiency as well. The studies within represent a first step in a developing effort to create a predictive model for BER cellular capacity.

  4. White matter involvement after TBI: Clues to axon and myelin repair capacity.

    Science.gov (United States)

    Armstrong, Regina C; Mierzwa, Amanda J; Marion, Christina M; Sullivan, Genevieve M

    2016-01-01

    Impact-acceleration forces to the head cause traumatic brain injury (TBI) with damage in white matter tracts comprised of long axons traversing the brain. White matter injury after TBI involves both traumatic axonal injury (TAI) and myelin pathology that evolves throughout the post-injury time course. The axon response to initial mechanical forces and secondary insults follows the process of Wallerian degeneration, which initiates as a potentially reversible phase of intra-axonal damage and proceeds to an irreversible phase of axon fragmentation. Distal to sites of axon disconnection, myelin sheaths remain for prolonged periods, which may activate neuroinflammation and inhibit axon regeneration. In addition to TAI, TBI can cause demyelination of intact axons. These evolving features of axon and myelin pathology also represent opportunities for repair. In experimental TBI, demyelinated axons exhibit remyelination, which can serve to both protect axons and facilitate recovery of function. Myelin remodeling may also contribute to neuroplasticity. Efficient clearance of myelin debris is a potential target to attenuate the progression of chronic pathology. During the early phase of Wallerian degeneration, interventions that prevent the transition from reversible damage to axon disconnection warrant the highest priority, based on the poor regenerative capacity of axons in the CNS. Clinical evaluation of TBI will need to address the challenge of accurately detecting the extent and stage of axon damage. Distinguishing the complex white matter changes associated with axons and myelin is necessary for interpreting advanced neuroimaging approaches and for identifying a broader range of therapeutic opportunities to improve outcome after TBI.

  5. Radiosensitivity and capacity for radiation-induced sublethal damage repair of canine transitional cell carcinoma (TCC) cell lines.

    Science.gov (United States)

    Parfitt, S L; Milner, R J; Salute, M E; Hintenlang, D E; Farese, J P; Bacon, N J; Bova, F J; Rajon, D A; Lurie, D M

    2011-09-01

    Understanding the inherent radiosensitivity and repair capacity of canine transitional cell carcinoma (TCC) can aid in optimizing radiation protocols to treat this disease. The objective of this study was to evaluate the parameters surviving fraction at 2 Gy (SF(2) ), α/β ratio and capacity for sublethal damage repair (SLDR) in response to radiation. Dose-response and split-dose studies were performed using the clonogenic assay. The mean SF(2) for three established TCC cell lines was high at 0.61. All the three cell lines exhibited a low to moderate α/β ratio, with the mean being 3.27. Two cell lines exhibited statistically increased survival at 4 and 24 h in the dose-response assay. Overall, our results indicate that the cell lines are moderately radioresistant, have a high repair capacity and behave similarly to a late-responding normal tissue. These findings indicate that the radiation protocols utilizing higher doses with less fractionation may be more effective for treating TCC.

  6. Breast Cancer and DNA Repair Capacity: Association With Use of Multivitamin and Calcium Supplements

    Science.gov (United States)

    Vergne, Yeidyly; Matta, Jaime; Morales, Luisa; Vargas, Wanda; Alvarez-Garriga, Carolina; Bayona, Manuel

    2013-01-01

    Context Breast cancer (BC) is the most common cancer in women, with over 1 million new cases diagnosed every year worldwide. Over recent decades, considerable interest has emerged regarding whether vitamins and/or other supplements can lower the risk of BC. However, previous epidemiologic studies that investigated the association between intake of multivitamin and supplements of single vitamins and minerals and BC risk have reported conflicting results. Whether vitamins can actually reduce BC risk is still controversial. Objective This study examined whether multivitamin and calcium use was associated with BC incidence and DNA repair capacity (DRC). Design The research team designed an observational, case-control study. Setting All work was performed at the Ponce School of Medicine and Health Sciences under the direct supervision of principal investigator Dr Jaime Matta. Participants Participants were 836 women recruited primarily from the private practices of oncologists, gynecologists, and surgeons in Puerto Rico. Intervention(s) A total of 312 individuals in the breast cancer (BC) group and 524 individuals in the control group were compared for their multivitamin and calcium intake, DRC levels, and other covariates. Outcome Measure(s) Odds ratios (OR), adjusted using both crude analysis and multiple logistic regression, were used as measures of association between BC and DRC and other selected variables. Results The BC group had 30% reduced odds of taking multivitamins and calcium as compared to controls: (1) OR = 0.7 (95% CI, 0.4–1.0; P = .073) for multivitamins and (2) OR = 0.7 (95% CI, 0.4–1.2; P = .167) for calcium. Women with low DRC had 50% lower odds of taking calcium and 30% lower odds of currently taking vitamins OR = 0.5 (95% CI, 0.4–0.7; P = .001) for calcium and (2) OR = 0.7 (95% CI, 0.5–0.9.1; P = .047) for vitamins. Conclusions Although this study is a case-control study in which the risk of BC could not be assessed, results suggest that

  7. Enhanced cellular radiosensitivity induced by cofilin-1 over-expression is associated with reduced DNA repair capacity

    Science.gov (United States)

    Leu, Jyh-Der; Chiu, Yu-Wen; Lo, Chia-Chien; Chiang, Pei-Hsun; Chiu, Su-Jun; Tsai, Cheng-Han; Hwang, Jeng-Jong; Chen, Ran-Chou; Gorbunova, Vera; Lee, Yi-Jang

    2013-01-01

    Purpose A previous report has indicated that over-expression of cofilin-1 (CFL-1), a member of the actin depolymerizing factor (ADF)/cofilin protein family, enhances cellular radiosensitivity. This study explores, the involvement of various DNA damage responses and repair systems in the enhanced cellular radiosensitivity as well as assessing the role of CFL-1 phosphorylation in radiosensitivity. Materials and Methods Human non-small lung cancer H1299 cells harboring a tet-on gene expression system were used to induce exogenous expression of wild-type CFL-1. Colony formation assays were used to determine cell survival after γ-ray exposure. DNA damage levels were determined by comet assay. DNA repair capacity was assessed by fluorescence-based DNA repair analysis and antibody detection of various repair proteins. The effects of CFL-1 phosphorylation on radiation responses were explored using two mutant CFL-1 proteins, S3D and S3A. Finally, endogenous CFL-1 phosphorylation levels were investigated using latrunculin A (LA), cytochalasin B (CB) and Y27632. Results When phosphorylatable CFL-1 was expressed, radiosensitivity was enhanced after exposure to γ-rays and this was accompanied by DNA damage. Phosphorylated histone H2AX (γ-H2AX) and p53-binding protein-1 (53BP1) foci, as well as Chk1/2 phosphorylation, were apparently suppressed, although ataxia telangiectasia mutated (ATM) kinase activation was apparently unaffected. In addition, two radiation induced double strand break (DSB) repair, systems, namely homologous recombination repair (HRR) and non-homologous end joining (NHEJ), were suppressed. Moreover, over-expression of CFL-1 S3D and CFL-1 S3A both enhanced radiosensitivity. However, enhanced radiosensitivity and reduced γ-H2AX expression were only detected in cells treated with LA which increased endogenous phospho-CFL-1, and not in cells treated with Y27632, which dephosphorylates CFL-1. Conclusion CFL-1 over-expression enhances radiosensitivity and this

  8. Chemoattractive capacity of different lengths of nerve fragments bridging regeneration chambers for the repair of sciatic nerve defects

    Institute of Scientific and Technical Information of China (English)

    Jiren Zhang; Yubo Wang; Jincheng Zhang

    2012-01-01

    A preliminary study by our research group showed that 6-mm-long regeneration chamber bridging is equivalent to autologous nerve transplantation for the repair of 12-mm nerve defects.In this study,we compared the efficacy of different lengths (6,8,10 mm) of nerve fragments bridging 6-mm regeneration chambers for the repair of 12-mm-long nerve defects.At 16 weeks after the regeneration chamber was implanted,the number,diameter and myelin sheath thickness of the regenerated nerve fibers,as well as the conduction velocity of the sciatic nerve and gastrocnemius muscle wet weight ratio,were similar to that observed with autologous nerve transplantation.Our results demonstrate that 6-,8-and 10-mm-long nerve fragments bridging 6-mm regeneration chambers effectively repair 12-mm-long nerve defects.Because the chemoattractive capacity is not affected by the length of the nerve fragment,we suggest adopting 6-mm-long nerve fragments for the repair of peripheral nerve defects.

  9. Mitochondrial base excision repair in mouse synaptosomes during normal aging and in a model of Alzheimer's disease.

    Science.gov (United States)

    Gredilla, Ricardo; Weissman, Lior; Yang, Jenq-Lin; Bohr, Vilhelm A; Stevnsner, Tinna

    2012-04-01

    Brain aging is associated with synaptic decline and synaptic function is highly dependent on mitochondria. Increased levels of oxidative DNA base damage and accumulation of mitochondrial DNA (mtDNA) mutations or deletions lead to mitochondrial dysfunction, playing an important role in the aging process and the pathogenesis of several neurodegenerative diseases. Here we have investigated the repair of oxidative base damage, in synaptosomes of mouse brain during normal aging and in an AD model. During normal aging, a reduction in the base excision repair (BER) capacity was observed in the synaptosomal fraction, which was associated with a decrease in the level of BER proteins. However, we did not observe changes between the synaptosomal BER activities of presymptomatic and symptomatic AD mice harboring mutated amyolid precursor protein (APP), Tau, and presinilin-1 (PS1) (3xTgAD). Our findings suggest that the age-related reduction in BER capacity in the synaptosomal fraction might contribute to mitochondrial and synaptic dysfunction during aging. The development of AD-like pathology in the 3xTgAD mouse model was, however, not associated with deficiencies of the BER mechanisms in the synaptosomal fraction when the whole brain was analyzed.

  10. Reduced cellular DNA repair capacity after environmentally relevant arsenic exposure. Influence of Ogg1 deficiency

    Energy Technology Data Exchange (ETDEWEB)

    Bach, Jordi; Peremartí, Jana; Annangi, Balasubramnayam [Grup de Mutagènesi, Departament de Genètica i de Microbiologia, Facultat de Biociències, Universitat Autònoma de Barcelona, Cerdanyola del Vallès, Barcelona (Spain); Marcos, Ricard, E-mail: ricard.marcos@uab.es [Grup de Mutagènesi, Departament de Genètica i de Microbiologia, Facultat de Biociències, Universitat Autònoma de Barcelona, Cerdanyola del Vallès, Barcelona (Spain); CIBER Epidemiología y Salud Pública, ISCIII, Madrid (Spain); Hernández, Alba, E-mail: alba.hernandez@uab.es [Grup de Mutagènesi, Departament de Genètica i de Microbiologia, Facultat de Biociències, Universitat Autònoma de Barcelona, Cerdanyola del Vallès, Barcelona (Spain); CIBER Epidemiología y Salud Pública, ISCIII, Madrid (Spain)

    2015-09-15

    Highlights: • Repair ability under long-term exposure to arsenic was tested using the comet assay. • Effects were measured under Ogg1 wild-type and deficient backgrounds. • Exposed cells repair less efficiency the DNA damage induced by SA, KBrO{sub 3}, MMA{sup III} or UVC radiation. • Oxidative damage and Ogg1 deficient background exacerbate repair deficiencies. • Overexpression of the arsenic metabolizing enzyme As3mt acts as adaptive mechanism. - Abstract: Inorganic arsenic (i-As) is a genotoxic and carcinogenic environmental contaminant known to affect millions of people worldwide. Our previous work demonstrated that chronic sub-toxic i-As concentrations were able to induce biologically significant levels of genotoxic and oxidative DNA damage that were strongly influenced by the Ogg1 genotype. In order to study the nature of the observed levels of damage and the observed differences between MEF Ogg1{sup +/+} and Ogg1{sup −/−} genetic backgrounds, the genotoxic and oxidative DNA repair kinetics of 18-weeks exposed MEF cells were evaluated by the comet assay. Results indicate that MEF Ogg1{sup +/+} and Ogg1{sup −/−} cells chronically exposed to i-As repair the DNA damage induced by arsenite, potassium bromide and UVC radiation less efficiently than control cells, being that observation clearly more pronounced in MEF Ogg1{sup −/−} cells. Consequently, exposed cells accumulate a higher percentage of unrepaired DNA damage at the end of the repair period. As an attempt to eliminate i-As associated toxicity, chronically exposed MEF Ogg1{sup −/−} cells overexpress the arsenic metabolizing enzyme As3mt. This adaptive response confers cells a significant resistance to i-As-induced cell death, but at expenses of accumulating high levels of DNA damage due to their repair impairment. Overall, the work presented here evidences that i-As chronic exposure disrupts the normal cellular repair function, and that oxidative DNA damage—and Ogg1 deficiency

  11. Reduced cellular DNA repair capacity after environmentally relevant arsenic exposure. Influence of Ogg1 deficiency.

    Science.gov (United States)

    Bach, Jordi; Peremartí, Jana; Annangi, Balasubramnayam; Marcos, Ricard; Hernández, Alba

    2015-09-01

    Inorganic arsenic (i-As) is a genotoxic and carcinogenic environmental contaminant known to affect millions of people worldwide. Our previous work demonstrated that chronic sub-toxic i-As concentrations were able to induce biologically significant levels of genotoxic and oxidative DNA damage that were strongly influenced by the Ogg1 genotype. In order to study the nature of the observed levels of damage and the observed differences between MEF Ogg1(+/+) and Ogg1(-/-) genetic backgrounds, the genotoxic and oxidative DNA repair kinetics of 18-weeks exposed MEF cells were evaluated by the comet assay. Results indicate that MEF Ogg1(+/+) and Ogg1(-/-) cells chronically exposed to i-As repair the DNA damage induced by arsenite, potassium bromide and UVC radiation less efficiently than control cells, being that observation clearly more pronounced in MEF Ogg1(-/-) cells. Consequently, exposed cells accumulate a higher percentage of unrepaired DNA damage at the end of the repair period. As an attempt to eliminate i-As associated toxicity, chronically exposed MEF Ogg1(-/-) cells overexpress the arsenic metabolizing enzyme As3mt. This adaptive response confers cells a significant resistance to i-As-induced cell death, but at expenses of accumulating high levels of DNA damage due to their repair impairment. Overall, the work presented here evidences that i-As chronic exposure disrupts the normal cellular repair function, and that oxidative DNA damage-and Ogg1 deficiency-exacerbates this phenomenon. The observed cell death resistance under a chronic scenario of genotoxic and oxidative stress may in turn contribute to the carcinogenic effects of i-As.

  12. Evaluation of radioinduced damage and repair capacity in human breast cancer cells, MCDF-7 and T4-D

    Energy Technology Data Exchange (ETDEWEB)

    Valgode, F.G.S.; Soares, C.R.J.; Bartolini, P.; Okazaki, K. [Instituto de Pesquisas Energeticas e Nucleares IPEN/CNEN-SP, Sao Paulo, SP (Brazil)]. E-mail: kokazaki@ipen.br

    2007-07-01

    Ionizing radiation is an established etiologic agent for breast cancer, but on the other hand it is a therapeutic modality used in cancer treatment. Accumulation of DNA damage and deficient DNA repair are considered as factors of susceptibility that predispose individuals to breast cancer development. In the present study, genetic damage induced by gamma radiation and repair capacity in the target cells, i.e. cells originating of breast cancer, were analyzed using micronucleus test and comet assay (single-cell alkaline gel electrophoresis). So, two breast tumor cell line, MCF-7 and T-47D were irradiated in a {sup 60}Co source (0.722 Gy/min) with various doses (0.5; 1.0; 2.0; 4.0 and 5.0 Gy). Cytogenetic data showed similar spontaneous damage of two cell lines, the radioinduced damage, however, was higher in T-47D, starting from 2 Gy, with a more accelerated proliferation rate than MCF- 7 at all doses analyzed. Both tumor cell lines were capable to repair a considerable part of radioinduced damage within 1 hour after exposure, indicating a relative radioresistance of theses cell lines to the genotoxic action of ionizing radiation. (author)

  13. Modulation of DNA-induced damage and repair capacity in humans after dietary intervention with lutein-enriched fermented milk.

    Directory of Open Access Journals (Sweden)

    Carmen Herrero-Barbudo

    Full Text Available Dietary factors provide protection against several forms of DNA damage. Additionally, consumer demand for natural products favours the development of bioactive food ingredients with health benefits. Lutein is a promising biologically active component in the food industry. The EFSA Panel on Dietetic Products, Nutrition and Allergies considers that protection from oxidative damage may be a beneficial physiological effect but that a cause and effect relationship has not been established. Thus, our aim was to evaluate the safety and potential functional effect of a lutein-enriched milk product using the Comet Assay in order to analyze the baseline, the induced DNA-damage and the repair capacity in the lymphocytes of 10 healthy donors before and after the intake of the mentioned product. Our data suggest that the regular consumption of lutein-enriched fermented milk results in a significant increase in serum lutein levels and this change is associated with an improvement in the resistance of DNA to damage and the capacity of DNA repair in lymphocytes. Our results also support the lack of a genotoxic effect at the doses supplied as well as the absence of interactions and side effects on other nutritional and biochemicals markers.

  14. Exploration of methods to identify polymorphisms associated with variation in DNA repair capacity phenotypes

    Energy Technology Data Exchange (ETDEWEB)

    Jones, I M; Thomas, C B; Xi, T; Mohrenweiser, H W; Nelson, D O

    2006-07-03

    Elucidating the relationship between polymorphic sequences and risk of common disease is a challenge. For example, although it is clear that variation in DNA repair genes is associated with familial cancer, aging and neurological disease, progress toward identifying polymorphisms associated with elevated risk of sporadic disease has been slow. This is partly due to the complexity of the genetic variation, the existence of large numbers of mostly low frequency variants and the contribution of many genes to variation in susceptibility. There has been limited development of methods to find associations between genotypes having many polymorphisms and pathway function or health outcome. We have explored several statistical methods for identifying polymorphisms associated with variation in DNA repair phenotypes. The model system used was 80 cell lines that had been resequenced to identify variation; 191 single nucleotide substitution polymorphisms (SNPs) are included, of which 172 are in 31 base excision repair pathway genes, 19 in 5 anti-oxidation genes, and DNA repair phenotypes based on single strand breaks measured by the alkaline Comet assay. Univariate analyses were of limited value in identifying SNPs associated with phenotype variation. Of the multivariable model selection methods tested: the easiest that provided reduced error of prediction of phenotype was simple counting of the variant alleles predicted to encode proteins with reduced activity, which led to a genotype including 52 SNPs; the best and most parsimonious model was achieved using a two-step analysis without regard to potential functional relevance: first SNPs were ranked by importance determined by Random Forests Regression (RFR), followed by cross-validation in a second round of RFR modeling that included ever more SNPs in declining order of importance. With this approach 6 SNPs were found to minimize prediction error. The results should encourage research into utilization of multivariate

  15. Evaluation of kidney repair capacity using 99mTc-DMSA in ischemia/reperfusion injury models.

    Science.gov (United States)

    Kwak, Wonjung; Jang, Hee-Seong; Belay, Takele; Kim, Jinu; Ha, Yeong Su; Lee, Sang Woo; Ahn, Byeong-Cheol; Lee, Jaetae; Park, Kwon Moo; Yoo, Jeongsoo

    2011-03-01

    Quantitative (99m)Tc-DMSA renal uptake was studied in different renal ischemia/reperfusion (I/R) mice models for the assessment of renal repair capacity. Mice models of nephrectomy, uni- and bi-lateral I/R together with sham-operated mice were established. At 1h, 1d, 4d, 1, 2 and 3 wk after I/R, (99m)Tc-DMSA (27.7 ± 1.3 MBq) was injected via tail vein and after 3h post-injection, the mice were scanned for 30 min with pinhole equipped gamma camera. Higher uptake of (99m)Tc-DMSA was measured in normal kidneys of uni-lateral I/R model and nephrectomized kidney I/R model at 3 wk post-surgery. Comparing the restoration capacities of the affected kidneys of nephrectomy, uni- and bi-lateral I/R models, higher repair capacity was observed in the nephrectomized model followed by bi-lateral then uni-lateral models. The normal kidney may retard the restoration of damaged kidney in uni-lateral I/R model. Moreover, 3 wk after Uni-I/R, the size of injured kidney was significantly smaller than non-ischemic contralateral and sham operated kidneys, while nephrectomy I/R kidneys were significantly enlarged compared to all others at 3 wk post-surgery. Very strong correlation between (99m)Tc-DMSA uptake and weight of dissected kidneys in I/R models was observed. Consistent with (99m)Tc-DMSA uptake results, all histological results indicate that kidney recovery after injury is correlated with the amount of intact tubules and kidney sizes. In summary, our study showed good potentials of (99m)Tc-DMSA scan as a promising non-invasive method for evaluation of kidney restoration after I/R injuries. Interestingly, mice with Bi-I/R injury showed faster repair capacity than those with uni-I/R.

  16. Limited integrative repair capacity of native cartilage autografts within cartilage defects in a sheep model.

    Science.gov (United States)

    Gelse, Kolja; Riedel, Dominic; Pachowsky, Milena; Hennig, Friedrich F; Trattnig, Siegfried; Welsch, Götz H

    2015-03-01

    The purpose of this study was to investigate integration and cellular outgrowth of native cartilage autografts transplanted into articular cartilage defects. Native cartilage autografts were applied into chondral defects in the femoral condyle of adult sheep. Within the defects, the calcified cartilage layer was either left intact or perforated to induce bone marrow stimulation. Empty defects served as controls. The joints were analyzed after 6 and 26 weeks by macroscopic and histological analysis using the ICRS II Score and Modified O'Driscoll Scores. Non-treated defects did not show any endogenous regenerative response and bone marrow stimulation induced fibrous repair tissue. Transplanted native cartilage grafts only insufficiently integrated with the defect borders. Cell death and loss of proteoglycans were present at the margins of the grafts at 6 weeks, which was only partially restored at 26 weeks. Significant cellular outgrowth from the grafts or defect borders could not be observed. Bonding of the grafts could be improved by additional bone marrow stimulation providing ingrowing cells that formed a fibrous interface predominantly composed of type I collagen. Transplanted native cartilage grafts remain as inert structures within cartilage defects and fail to induce integrative cartilage repair which rather demands additional cells provided by additional bone marrow stimulation. © 2014 Orthopaedic Research Society. Published by Wiley Periodicals, Inc.

  17. How to Relate Complex DNA Repair Genotypes to Pathway Function and, Ultimately, Health Risk

    Energy Technology Data Exchange (ETDEWEB)

    Jones, IM

    2002-01-09

    Exposure to ionizing radiation increases the incidence of cancer. However, predicting which individuals are at most risk from radiation exposure is a distant goal. Predictive ability is needed to guide policies that regulate radiation exposure and ensure that medical treatments have maximum benefit and minimum risk. Differences between people in susceptibility to radiation are largely based on their genotype, the genes inherited from their parents. Among the important genes are those that produce proteins that repair DNA damaged by radiation. Base Excision Repair (BER) proteins repair single strand breaks and oxidized bases in DNA. Double Strand Break Repair proteins repair broken chromosomes. Using technologies and information from the Human Genome Project, we have previously determined that the DNA sequence of DNA repair genes varies within the human population. An average of 3-4 different variants were found that affect the protein for each of 37 genes studied. The average frequency of these variants is 5%. Given the many genes in each DNA repair pathway and their many variants, technical ability to determine an individual's repair genotype greatly exceeds ability to interpret the information. A long-term goal is to relate DNA repair genotypes to health risk from radiation. This study focused on the BER pathway. The BER genes are known, variants of the genes have been identified at LLNL, and LLNL had recently developed an assay for BER function using white blood cells. The goal of this initial effort was to begin developing data that could be used to test the hypothesis that many different genotypes have similar DNA repair capacity phenotypes (function). Relationships between genotype and phenotype could then be used to group genotypes with similar function and ultimately test the association of groups of genotypes with health risk from radiation. Genotypes with reduced repair function are expected to increase risk of radiation-induced health effects. The

  18. Exploring the potential interference of estuarine sediment contaminants with the DNA repair capacity of human hepatoma cells.

    Science.gov (United States)

    Pinto, Miguel Ferreira; Louro, Henriqueta; Costa, Pedro M; Caeiro, Sandra; Silva, Maria João

    2015-01-01

    Estuaries may be reservoirs of a wide variety of pollutants, including mutagenic and carcinogenic substances that may impact on the ecosystem and human health. A previous study showed that exposure of human hepatoma (HepG2) cells to extracts from sediment samples collected in two areas (urban/industrial and riverine/agricultural) of an impacted estuary (Sado, Portugal), produced differential cytotoxic and genotoxic effects. Those effects were found to be consistent with levels and nature of sediment contamination. The present study aimed at evaluating whether the mixtures of contaminants contained in those extracts were able to modulate DNA repair capacity of HepG2 cells. The residual level of DNA damage was measured by the comet assay in cells exposed for 24 or 48 h to different extracts, after a short preexposure to a challenging concentration range of ethyl methanesulfonate (EMS), as a model alkylating agent. The results suggested that the mixture of contaminants present in the tested samples, besides a potential direct effect on the DNA molecule, may also interfere with DNA repair mechanisms in HepG2 cells, thus impairing their ability to deal with genotoxic stress and, possibly, facilitating accumulation of mutations. Humans are environmentally/occupationally exposed to mixtures rather than to single chemicals. Thus, the observation that estuarine contaminants induce direct and indirect DNA strand breakage in human cells, the latter through the impairment of DNA repair, raises additional concerns regarding potential hazards from exposure and the need to further explore these endpoints in the context of environmental risk assessment.

  19. Calcium-binding capacity of centrin2 is required for linear POC5 assembly but not for nucleotide excision repair.

    Directory of Open Access Journals (Sweden)

    Tiago J Dantas

    Full Text Available Centrosomes, the principal microtubule-organising centres in animal cells, contain centrins, small, conserved calcium-binding proteins unique to eukaryotes. Centrin2 binds to xeroderma pigmentosum group C protein (XPC, stabilising it, and its presence slightly increases nucleotide excision repair (NER activity in vitro. In previous work, we deleted all three centrin isoforms present in chicken DT40 cells and observed delayed repair of UV-induced DNA lesions, but no centrosome abnormalities. Here, we explore how centrin2 controls NER. In the centrin null cells, we expressed centrin2 mutants that cannot bind calcium or that lack sites for phosphorylation by regulatory kinases. Expression of any of these mutants restored the UV sensitivity of centrin null cells to normal as effectively as expression of wild-type centrin. However, calcium-binding-deficient and T118A mutants showed greatly compromised localisation to centrosomes. XPC recruitment to laser-induced UV-like lesions was only slightly slower in centrin-deficient cells than in controls, and levels of XPC and its partner HRAD23B were unaffected by centrin deficiency. Interestingly, we found that overexpression of the centrin interactor POC5 leads to the assembly of linear, centrin-dependent structures that recruit other centrosomal proteins such as PCM-1 and NEDD1. Together, these observations suggest that assembly of centrins into complex structures requires calcium binding capacity, but that such assembly is not required for centrin activity in NER.

  20. Über dieses Heft

    Directory of Open Access Journals (Sweden)

    Herausgeber / Editors

    2016-12-01

    Full Text Available Erzählungen werden in vielen Lebensbereichen und Handlungsfeldern eingesetzt, um bestimmte Ziele im Rahmen einer mehr oder minder umfassenden Strategie zu erreichen. Dieses „strategische Erzählen” lässt sich teilweise in die rhetorische Überzeugungslehre eingliedern; das Spektrum der möglichen Ziele geht jedoch, wie die folgenden Beiträge zeigen, über die klassische Persuasio hinaus. In Konrads Engelhard dient die Art und Weise des Erzählens – laut Eva Lieberich – einer Vorbereitung des Lesers auf den Umgang mit „neidischer Rede”. Ein ähnlich didaktisch-moralisches Ziel verfolgt das bekannte Samaritergleichnis bei Lukas. Jan Rüggemeier arbeitet hier insbesondere heraus, wie diese Wirkungsintention strategisch an unterschiedliche Rezipientenkreise angepasst wird und so zur kollektiven Identitätsbildung religiöser Gemeinschaften beiträgt. Die Wechselwirkung zwischen Erzähler und Angesprochenem wird in dem Beitrag von Mareike von Müller und Matthias Wermeling vertieft, die zugleich die Brücke von Mittelalter zu Gegenwart schlagen: Sie vergleichen aktuelle Mystories, durch welche Patienten ihren Krankheiten erzählerisch Sinn zu geben versuchen, mit mittelalterlichen Erzählschemata. Bei dieser Art von Mystories zeichnen sich die Grenzen des Erzählens ab, die strategische Narrativierung des Geschehens steht in Spannung zu einer antagonistischen Tendenz, die sich den vertrauten Schemata entzieht. Erstaunlicherweise beobachtet ausgerechnet der ganz in der Kultur der Gegenwart verankerte Beitrag, in dem Nancy Menning und Luke Keller den Dokumentarfilm Journey of the Universe (2011 analysieren, wie eine Mischung von wissenschaftlichen Plausibilisierungsstrategien und eher religiös-mythologischen Topoi die Rezipienten überzeugen soll – was von der ungeminderten Aktualität der klassischen rhetorischen Persuasionsstrategien zeugt. Daneben darf man die innovative Kraft der Frage nach dem strategischen Erzählen innerhalb

  1. MIMO-OFDM Precoding Technique for Minimizing BER Upper Bound of MLD

    Science.gov (United States)

    Pitakdumrongkija, Boonsarn; Fukawa, Kazuhiko; Suzuki, Hiroshi; Hagiwara, Takashi

    This paper proposes a new MIMO-OFDM precoding technique that aims to minimize a bit error rate (BER) upper bound of the maximum likelihood detection (MLD) in mobile radio communications. Using a steepest descent algorithm, the proposed method estimates linear precoding matrices that can minimize the upper bound of BER under power constraints. Since the upper bound is derived from all the pairwise error probabilities, this method can effectively optimize overall Euclidean distances between signals received by multiple antennas and their replicas. Computer simulations evaluate the BER performance and channel capacity of the proposed scheme for 2×2 and 4×4 MIMO-OFDM systems with BPSK, QPSK, and 16QAM. It is demonstrated that the proposed precoding technique is superior in terms of average BER to conventional precoding methods including a precoder which maximizes only the minimum Euclidean distance as the worst case.

  2. Mittheilungen über Scyphomedusen I

    NARCIS (Netherlands)

    Stiasny, G.

    1921-01-01

    Hiemit beabsichtige ich eine Reihe kleinerer Mittheilungen über Semaeostomeen und Rhizostomeen des Rijksmuseums van Natuurlijke Historie in Leiden zu veröffentlichen, welche die Systematik, Biologie, Entwicklungsgeschichte und Anatomie verschiedener Scyphomedusen behandeln. Die vorliegenden beiden

  3. Mittheilungen über Scyphomedusen I

    NARCIS (Netherlands)

    Stiasny, G.

    1921-01-01

    Hiemit beabsichtige ich eine Reihe kleinerer Mittheilungen über Semaeostomeen und Rhizostomeen des Rijksmuseums van Natuurlijke Historie in Leiden zu veröffentlichen, welche die Systematik, Biologie, Entwicklungsgeschichte und Anatomie verschiedener Scyphomedusen behandeln. Die vorliegenden beiden k

  4. Effects of combined physical exercise training on DNA damage and repair capacity: role of oxidative stress changes.

    Science.gov (United States)

    Soares, Jorge Pinto; Silva, Amélia M; Oliveira, Maria Manuel; Peixoto, Francisco; Gaivão, Isabel; Mota, Maria Paula

    2015-06-01

    Regular physical exercise has been shown to be one of the most important lifestyle influences on improving functional performance, decreasing morbidity and all causes of mortality among older people. However, it is known that acute physical exercise may induce an increase in oxidative stress and oxidative damage in several structures, including DNA. Considering this, the purpose of this study was to identify the effects of 16 weeks of combined physical exercise in DNA damage and repair capacity in lymphocytes. In addition, we aimed to investigate the role of oxidative stress involved in those changes. Fifty-seven healthy men (40 to 74 years) were enrolled in this study. The sample was divided into two groups: the experimental group (EG), composed of 31 individuals, submitted to 16 weeks of combined physical exercise training; and the control group (CG), composed of 26 individuals, who did not undergo any specifically orientated physical activity. We observed an improvement of overall physical performance in the EG, after the physical exercise training. A significant decrease in DNA strand breaks and FPG-sensitive sites was found after the physical exercise training, with no significant changes in 8-oxoguanine DNA glycosylase enzyme activity. An increase was observed in antioxidant activity, and a decrease was found in lipid peroxidation levels after physical exercise training. These results suggest that physical exercise training induces protective effects against DNA damage in lymphocytes possibly related to the increase in antioxidant capacity.

  5. Über dieses Heft

    Directory of Open Access Journals (Sweden)

    Editors / Herausgeber

    2016-06-01

    -Sektion dieser Ausgabe findet sich ein Interview mit Susan S. Lanser, einer renommierten Narratologin und Mitbegründerin der feministischen Literaturtheorie. Sie denkt über ihre Einflüsse nach, erklärt, warum sie Bleak House von Charles Dickens als Lektüre auf eine einsame Insel mitnehmen würde, und deutet an, dass die Narratologie eine neue Perspektive auf den israelisch-palästinensischen Konflikt bieten kann.Wir wünschen Ihnen, liebe Leserinnen und Leser, eine anregende Lektüre!

  6. Über dieses Heft

    Directory of Open Access Journals (Sweden)

    Editors / Herausgeber

    2013-06-01

    Full Text Available Bilder, audiovisuelle Medien, elektronische Medien, World Wide Web: Das Erzählen vollzieht sich mittlerweile in vielfältigen Formen. Der intensive Gebrauch von neuen Medien in unterschiedlichen Zusammenhängen begegnet, überlagert und vermischt sich mit der Rezeption traditioneller literarischer Medien, die nach wie vor weit verbreitet sind. Für die Erzählforschung ergibt sich aus der veränderten kulturellen Praxis eine Vielzahl von Folgen. Die vorliegende Ausgabe von DIEGESIS soll einen Eindruck davon vermitteln. So rückt etwa ein Korpus in den Vordergrund, das lange Zeit eine Randexistenz führte: Erzählungen, die nicht oder nicht ausschließlich durch Sprache vermittelt werden, und solche, die nicht mehr nur die Kulturtechnik des Lesens und Schreibens voraussetzen. Andere Techniken, andere Gesten begleiten den Umgang mit diesen Erzählungen, und diese Differenz wird an denjenigen Stellen besonders deutlich, wo unterschiedliche Medien ineinander verschachtelt sind. Die Erzeugung von Komplexität durch intermediale Relationen charakterisiert dieses neue Korpus und öffnet für die Erzählforschung neue Arbeitsfelder. Gerade die markanten Medienwechsel, die mit der Vermarktung erfolgreicher Stoffe – als Roman, als Film, als Computerspiel, als Comic, als YouTube-Parodie – einhergehen, werfen die doppelte Frage auf, was in diesen Varianten das gemeinsame narrative Substrat, und was hingegen medienspezifische Erzählverfahren sind. Der ersten Perspektive folgt in der vorliegenden Ausgabe Matthias Brütsch mit einer kritischen Prüfung transmedialer Narrativitätsvergleiche; die zweite entfalten Sebastian Armbrusts Beitrag über Komplexität in bekannten Fernsehserien wie House und The Wire und Markus Kuhns Analyse der narrativen Funktion der Handkamera als spezifischem Verfahren in Spielfilmen und fiktionalen Internetclips. Selbstverständlich haben sich auch bestehende Kategorien der Erzählforschung unter dem Eindruck gewandelt, dass

  7. Exposure to runoff from coal-tar-sealed pavement induces genotoxicity and impairment of DNA repair capacity in the RTL-W1 fish liver cell line

    Science.gov (United States)

    Kienzler, Aude; Mahler, Barbara J.; Van Metre, Peter C.; Schweigert, Nathalie; Devaux, Alain; Bony, Sylvie

    2015-01-01

    Coal-tar-based (CTB) sealcoat, frequently applied to parking lots and driveways in North America, contains elevated concentrations of polycyclic aromatic hydrocarbons (PAHs) and related compounds. The RTL-W1 fish liver cell line was used to investigate two endpoints (genotoxicity and DNA-repair-capacity impairment) associated with exposure to runoff from asphalt pavement with CTB sealcoat or with an asphalt-based sealcoat hypothesized to contain about 7% CTB sealcoat (AS-blend). Genotoxic potential was assessed by the Formamido pyrimidine glycosylase (Fpg)-modified comet assay for 1:10 and 1:100 dilutions of runoff samples collected from 5 h to 36 d following sealcoat application. DNA-repair capacity was assessed by the base excision repair comet assay for 1:10 dilution of samples collected 26 h and 36 d following application. Both assays were run with and without co-exposure to ultraviolet-A radiation (UVA). With co-exposure to UVA, genotoxic effects were significant for both dilutions of CTB runoff for three of four sample times, and for some samples of AS-blend runoff. Base excision repair was significantly impaired for CTB runoff both with and without UVA exposure, and for AS-blend runoff only in the absence of UVA. This study is the first to investigate the effects of exposure to the complex mixture of chemicals in coal tar on DNA repair capacity. The results indicate that co-exposure to runoff from CT-sealcoated pavement and UVA as much as a month after sealcoat application has the potential to cause genotoxicity and impair DNA repair capacity.

  8. Über dieses Heft

    Directory of Open Access Journals (Sweden)

    Editors / Herausgeber

    2013-12-01

    Full Text Available Das journalistische Erzählen ist nicht erst neu zu entdecken – es besitzt eine lange und prominente eigenständige Tradition, die von so unterschiedlichen Autoren wie Émile Zola, Egon Erwin Kisch, Gabriel García Márquez, Tom Wolfe u.v.a.m. geprägt wurde. Narratologische Zugänge haben jedoch in den letzten Jahren zu einer präziseren Beschreibung der besonderen Leistungen journalistischen Erzählens beigetragen. Das verdeutlichen auch die Beiträge dieses Heftes. Ethische Aspekte journalistischer Texte können eng mit den jeweils verwendeten Erzählverfahren zusammenhängen – so die These Friederike Herrmanns. Sie kritisiert den vermeintlich objektiven, quasi erzählerlosen Darstellungsstil von Nachrichten in Printmedien als einen weit verbreiteten, aber vergeblichen Versuch, mit Hilfe einer unsichtbar gemachten Erzählinstanz das Ideal einer reinen Faktenpräsentation zu erreichen. Stattdessen, so ihr Vorschlag, solle der Reporter die Standpunktgebundenheit seines Nachrichtentextes stilistisch und erzählerisch deutlich machen. Im interaktiven Online-Journalismus seien Ansätze zu einer derartigen Nachrichtenvermittlung auf Augenhöhe mit den Lesern erkennbar. Narrativer Journalismus, führt Marie Vanoost aus, sei als hybrides Genre zwischen fiktionaler Erzählliteratur und konventionellen Pressemeldungen angesiedelt. Er zeichne sich durch ebenso komplexe wie spezifische Plotkonstruktionen aus. In drei Fallanalysen untersucht Vanoost mit Hilfe von Begriffen Raphäel Baronis und Paul Ricoeurs das Zusammenspiel von intriguing function (fonction intriguante, in der die Dynamik des Leseprozesses im Vordergrund stehe, und configuring function (fonction configurante, die eher informativ und explikativ orientiert sei. Plotkonstruktionen stehen auch im Vordergrund von Valérie Roberts Beitrag über den journalistischen Umgang mit der „Wulff-Affäre“, die im Jahr 2012 zum Rücktritt des deutschen Bundespräsidenten Christian Wulff f

  9. Exposure to runoff from coal-tar-sealed pavement induces genotoxicity and impairment of DNA repair capacity in the RTL-W1 fish liver cell line

    Energy Technology Data Exchange (ETDEWEB)

    Kienzler, Aude, E-mail: aude.kienzler@entpe.fr [Université de Lyon, UMR LEHNA 5023, USC INRA, ENTPE, rue Maurice Audin, Vaulx-en-Velin F-69518 (France); Mahler, Barbara J., E-mail: bjmahler@usgs.gov [U.S. Geological Survey, 1505 Ferguson Lane, Austin, TX 78754 (United States); Van Metre, Peter C., E-mail: pcvanmet@usgs.gov [U.S. Geological Survey, 1505 Ferguson Lane, Austin, TX 78754 (United States); Schweigert, Nathalie [Université de Lyon, UMR LEHNA 5023, USC INRA, ENTPE, rue Maurice Audin, Vaulx-en-Velin F-69518 (France); Devaux, Alain, E-mail: alain.devaux@entpe.fr [Université de Lyon, UMR LEHNA 5023, USC INRA, ENTPE, rue Maurice Audin, Vaulx-en-Velin F-69518 (France); Bony, Sylvie, E-mail: bony@entpe.fr [Université de Lyon, UMR LEHNA 5023, USC INRA, ENTPE, rue Maurice Audin, Vaulx-en-Velin F-69518 (France)

    2015-07-01

    Coal-tar-based (CTB) sealcoat, frequently applied to parking lots and driveways in North America, contains elevated concentrations of polycyclic aromatic hydrocarbons (PAHs) and related compounds. The RTL-W1 fish liver cell line was used to investigate two endpoints (genotoxicity and DNA-repair-capacity impairment) associated with exposure to runoff from asphalt pavement with CTB sealcoat or with an asphalt-based sealcoat hypothesized to contain about 7% CTB sealcoat (AS-blend). Genotoxic potential was assessed by the Formamido pyrimidine glycosylase (Fpg)-modified comet assay for 1:10 and 1:100 dilutions of runoff samples collected from 5 h to 36 d following sealcoat application. DNA-repair capacity was assessed by the base excision repair comet assay for 1:10 dilution of samples collected 26 h and 36 d following application. Both assays were run with and without co-exposure to ultraviolet-A radiation (UVA). With co-exposure to UVA, genotoxic effects were significant for both dilutions of CTB runoff for three of four sample times, and for some samples of AS-blend runoff. Base excision repair was significantly impaired for CTB runoff both with and without UVA exposure, and for AS-blend runoff only in the absence of UVA. This study is the first to investigate the effects of exposure to the complex mixture of chemicals in coal tar on DNA repair capacity. The results indicate that co-exposure to runoff from CT-sealcoated pavement and UVA as much as a month after sealcoat application has the potential to cause genotoxicity and impair DNA repair capacity. - Highlights: • Co-exposure to runoff from coal-tar-sealcoated pavement and UVA caused DNA damage. • Significant genotoxicity occurred with a 1:100 dilution of runoff. • Runoff collected up to 36 d following coal-tar-sealcoat application was genotoxic. • Exposure to runoff from sealed pavement impaired an important DNA repair pathway. • Repair capacity was impaired with a 1:10 dilution of runoff (1:100 not

  10. Comparative repair capacity of knee osteochondral defects using regenerated silk fiber scaffolds and fibrin glue with/without autologous chondrocytes during 36 weeks in rabbit model.

    Science.gov (United States)

    Kazemnejad, Somaieh; Khanmohammadi, Manijeh; Mobini, Sahba; Taghizadeh-Jahed, Masoud; Khanjani, Sayeh; Arasteh, Shaghayegh; Golshahi, Hannaneh; Torkaman, Giti; Ravanbod, Roya; Heidari-Vala, Hamed; Moshiri, Ali; Tahmasebi, Mohammad-Naghi; Akhondi, Mohammad-Mehdi

    2016-06-01

    The reconstruction capability of osteochondral (OCD) defects using silk-based scaffolds has been demonstrated in a few studies. However, improvement in the mechanical properties of natural scaffolds is still challengeable. Here, we investigate the in vivo repair capacity of OCD defects using a novel Bombyx mori silk-based composite scaffold with great mechanical properties and porosity during 36 weeks. After evaluation of the in vivo biocompatibility and degradation rate of these scaffolds, we examined the effectiveness of these fabricated scaffolds accompanied with/without autologous chondrocytes in the repair of OCD lesions of rabbit knees after 12 and 36 weeks. Moreover, the efficiency of these scaffolds was compared with fibrin glue (FG) as a natural carrier of chondrocytes using parallel clinical, histopathological and mechanical examinations. The data on subcutaneous implantation in mice showed that the designed scaffolds have a suitable in vivo degradation rate and regenerative capacity. The repair ability of chondrocyte-seeded scaffolds was typically higher than the scaffolds alone. After 36 weeks of implantation, most parts of the defects reconstructed by chondrocytes-seeded silk scaffolds (SFC) were hyaline-like cartilage. However, spontaneous healing and filling with a scaffold alone did not eventuate in typical repair. We could not find significant differences between quantitative histopathological and mechanical data of SFC and FGC. The fabricated constructs consisting of regenerated silk fiber scaffolds and chondrocytes are safe and suitable for in vivo repair of OCD defects and promising for future clinical trial studies.

  11. Deutsch lernen über das Internet

    Directory of Open Access Journals (Sweden)

    Engler, Lela-Rose

    2001-01-01

    Full Text Available Seit einigen Jahren wird diskutiert, welche Möglichkeiten die Anwendung und Einbeziehung des "Internet" im Fremdsprachenerwerb bietet. Dabei hat sich das Interesse u. a. darauf gerichtet, welche Potentiale die neuen Medien bei der Gestaltung von fremdsprachlichen Lehr-und Lernprozessen über die Distanz bergen, also über ihren Einsatz im direkten Sprachunterricht hinaus. Erfahrungen mit Sprachkursen auf multimedialer Basis haben zu einer Diskussion über die Veränderungen des Lehrens und Lernens in diesen neuen Umgebungen geführt. Eine große Rolle spielt dabei das autonome Lernen, das durch den Einsatz der neuen Medien im Fremdsprachenunterricht gefördert wird. Noch gibt es nur wenige Untersuchungen zu fremdsprachlichen Lernprozessen in Sprachfernlernkursen. In dem Beitrag sollen neben anderen auch eigene Erfahrungen aus einem Distanzkurs dargestellt werden.

  12. The GH/IGF-1 axis in a critical period early in life determines cellular DNA repair capacity by altering transcriptional regulation of DNA repair-related genes: implications for the developmental origins of cancer.

    Science.gov (United States)

    Podlutsky, Andrej; Valcarcel-Ares, Marta Noa; Yancey, Krysta; Podlutskaya, Viktorija; Nagykaldi, Eszter; Gautam, Tripti; Miller, Richard A; Sonntag, William E; Csiszar, Anna; Ungvari, Zoltan

    2017-02-23

    Experimental, clinical, and epidemiological findings support the concept of developmental origins of health and disease (DOHAD), suggesting that early-life hormonal influences during a sensitive period around adolescence have a powerful impact on cancer morbidity later in life. The endocrine changes that occur during puberty are highly conserved across mammalian species and include dramatic increases in circulating GH and IGF-1 levels. Importantly, patients with developmental IGF-1 deficiency due to GH insensitivity (Laron syndrome) do not develop cancer during aging. Rodents with developmental GH/IGF-1 deficiency also exhibit significantly decreased cancer incidence at old age, marked resistance to chemically induced carcinogenesis, and cellular resistance to genotoxic stressors. Early-life treatment of GH/IGF-1-deficient mice and rats with GH reverses the cancer resistance phenotype; however, the underlying molecular mechanisms remain elusive. The present study was designed to test the hypothesis that developmental GH/IGF-1 status impacts cellular DNA repair mechanisms. To achieve that goal, we assessed repair of γ-irradiation-induced DNA damage (single-cell gel electrophoresis/comet assay) and basal and post-irradiation expression of DNA repair-related genes (qPCR) in primary fibroblasts derived from control rats, Lewis dwarf rats (a model of developmental GH/IGF-1 deficiency), and GH-replete dwarf rats (GH administered beginning at 5 weeks of age, for 30 days). We found that developmental GH/IGF-1 deficiency resulted in persisting increases in cellular DNA repair capacity and upregulation of several DNA repair-related genes (e.g., Gadd45a, Bbc3). Peripubertal GH treatment reversed the radiation resistance phenotype. Fibroblasts of GH/IGF-1-deficient Snell dwarf mice also exhibited improved DNA repair capacity, showing that the persisting influence of peripubertal GH/IGF-1 status is not species-dependent. Collectively, GH/IGF-1 levels during a critical period

  13. The dipeptidyl peptidase-4 inhibitor vildagliptin has the capacity to repair β-cell dysfunction and insulin resistance.

    Science.gov (United States)

    Horie, A; Tokuyama, Y; Ishizuka, T; Suzuki, Y; Marumo, K; Oshikiri, K; Ide, K; Sunaga, M; Kanatsuka, A

    2014-10-01

    The aim of the present study was to determine whether the dipeptidyl peptidase (DPP)-4 inhibitor could repair pancreatic β-cell dysfunction and insulin resistance. Ten subjects with type 2 diabetes who had never received DPP-4 inhibitor treatment were enrolled in the study. Just before and 3 months after twice-daily administration of vildagliptin (50 mg tablets), insulin secretion and insulin sensitivity were estimated using 2-compartment model analysis of C-peptide kinetics and insulin-modified minimal model parameters, respectively. The first-phase insulin secretion (CS1) was determined as the sum of the C-peptide secretion rate (CSR) from 0 to 5 min (normal range 6.8-18.5 ng/ml/min). The whole-body insulin sensitivity index (SI) was calculated using a minimal model software program (normal range 2.6-7.6×10(-4)/min/μU/ml). After vildagliptin treatment, reductions in mean (± SE) HbA1c were noted (43.28±1.53 vs. 40.98±1.77 mmol/mol; p=0.019). Vildagliptin treatment increased the area under the curve for the C peptide reactivity (CPR) (AUCCPR; 26.66±5.15 vs. 33.02±6.12 ng/ml · 20 min; p=0.003) and CS1 (0.80±0.20 vs. 1.35±0.38 ng/ml/min; p=0.037) in response to an intravenous glucose load. -Vildagliptin treatment significantly increased SI (0.46±0.27 vs. 1.21±0.48×10(-4)/min/μU/ml; p=0.037). The long-term administration of vildagliptin improved CS1 and Si suggesting that this drug has the capacity to repair impairments in pancreatic β-cell function and insulin resistance in type 2 diabetes.

  14. Fused combiners for photonic crystal bers

    DEFF Research Database (Denmark)

    Noordegraaf, Danny

    The work presented in this Ph.D. thesis focuses on the fabrication of fused combiners for high-power fiber lasers and amplifiers. The main focus of the Ph.D. project was to further develop the fused pump combiners for airclad photonic crystal bers (PCFs), and implement a signal feed...

  15. Targeting base excision repair as a sensitization strategy in radiotherapy.

    NARCIS (Netherlands)

    Vens, C.; Begg, A.C.

    2010-01-01

    Cellular DNA repair determines survival after ionizing radiation. Human tumors commonly exhibit aberrant DNA repair since they drive mutagenesis and chromosomal instability. Recent reports have shown alterations in the base excision repair (BER) and single strand break repair (SSBR) pathways in huma

  16. In normal human fibroblasts variation in DSB repair capacity cannot be ascribed to radiation-induced changes in the localisation, expression or activity of major NHEJ proteins

    DEFF Research Database (Denmark)

    Kasten-Pisula, Ulla; Vronskaja, Svetlana; Overgaard, Jens

    2008-01-01

    BACKGROUND AND PURPOSE: The aim of the present study was to test whether for normal human fibroblasts the variation in double-strand break (DSB) repair capacity results from radiation-induced differences in localisation, expression or activity of major non-homologous end-joining (NHEJ) proteins....... MATERIALS AND METHODS: Experiments were performed with 11 normal human fibroblast strains AF01-11. NHEJ proteins were determined by Western blot and DNA-PK activity by pulldown-assay. RESULTS: The four NHEJ proteins tested (Ku70, Ku80, XRCC4 and DNA-PKcs) were found to be localised almost exclusively...... in the activity of the DNA-PK complex induced upon irradiation. CONCLUSIONS: For normal human fibroblasts, the level or activity of NHEJ proteins measured prior to or after irradiation cannot be used to predict the DSB repair capacity or cellular radiosensitivity. Udgivelsesdato: 2008-Mar...

  17. Influence of XRCC1 Genetic Polymorphisms on Ionizing Radiation-Induced DNA Damage and Repair

    Science.gov (United States)

    Sterpone, Silvia; Cozzi, Renata

    2010-01-01

    It is well known that ionizing radiation (IR) can damage DNA through a direct action, producing single- and double-strand breaks on DNA double helix, as well as an indirect effect by generating oxygen reactive species in the cells. Mammals have evolved several and distinct DNA repair pathways in order to maintain genomic stability and avoid tumour cell transformation. This review reports important data showing a huge interindividual variability on sensitivity to IR and in susceptibility to developing cancer; this variability is principally represented by genetic polymorphisms, that is, DNA repair gene polymorphisms. In particular we have focussed on single nucleotide polymorphisms (SNPs) of XRCC1, a gene that encodes for a scaffold protein involved basically in Base Excision Repair (BER). In this paper we have reported and presented recent studies that show an influence of XRCC1 variants on DNA repair capacity and susceptibility to breast cancer. PMID:20798883

  18. Influence of XRCC1 Genetic Polymorphisms on Ionizing Radiation-Induced DNA Damage and Repair

    Directory of Open Access Journals (Sweden)

    Silvia Sterpone

    2010-01-01

    Full Text Available It is well known that ionizing radiation (IR can damage DNA through a direct action, producing single- and double-strand breaks on DNA double helix, as well as an indirect effect by generating oxygen reactive species in the cells. Mammals have evolved several and distinct DNA repair pathways in order to maintain genomic stability and avoid tumour cell transformation. This review reports important data showing a huge interindividual variability on sensitivity to IR and in susceptibility to developing cancer; this variability is principally represented by genetic polymorphisms, that is, DNA repair gene polymorphisms. In particular we have focussed on single nucleotide polymorphisms (SNPs of XRCC1, a gene that encodes for a scaffold protein involved basically in Base Excision Repair (BER. In this paper we have reported and presented recent studies that show an influence of XRCC1 variants on DNA repair capacity and susceptibility to breast cancer.

  19. Differential promoter methylation of kinesin family member 1a in plasma is associated with breast cancer and DNA repair capacity

    Science.gov (United States)

    GUERRERO-PRESTON, RAFAEL; HADAR, TAL; OSTROW, KIMBERLY LASKIE; SOUDRY, ETHAN; ECHENIQUE, MIGUEL; ILI-GANGAS, CARMEN; PÉREZ, GABRIELA; PEREZ, JIMENA; BREBI-MIEVILLE, PRISCILLA; DESCHAMPS, JOSÉ; MORALES, LUISA; BAYONA, MANUEL; SIDRANSKY, DAVID; MATTA, JAIME

    2014-01-01

    Methylation alterations of CpG islands, CpG island shores and first exons are key events in the formation and progression of human cancer, and an increasing number of differentially methylated regions and genes have been identified in breast cancer. Recent studies of the breast cancer methylome using deep sequencing and microarray platforms are providing a novel insight on the different roles aberrant methylation plays in molecular subtypes of breast cancer. Accumulating evidence from a subset of studies suggests that promoter methylation of tumor-suppressor genes associated with breast cancer can be quantified in circulating DNA. However, there is a paucity of studies that examine the combined presence of genetic and epigenetic alterations associated with breast cancer using blood-based assays. Dysregulation of DNA repair capacity (DRC) is a genetic risk factor for breast cancer that has been measured in lymphocytes. We isolated plasma DNA from 340 participants in a breast cancer case control project to study promoter methylation levels of five genes previously shown to be associated with breast cancer in frozen tissue and in cell line DNA: MAL, KIF1A, FKBP4, VGF and OGDHL. Methylation of at least one gene was found in 49% of the cases compared to 20% of the controls. Three of the four genes had receiver characteristic operator curve values of ≥0.50: MAL (0.64), KIF1A (0.51) and OGDHL (0.53). KIF1A promoter methylation was associated with breast cancer and inversely associated with DRC. This is the first evidence of a significant association between genetic and epigenetic alterations in breast cancer using blood-based tests. The potential diagnostic utility of these biomarkers and their relevance for breast cancer risk prediction should be examined in larger cohorts. PMID:24927296

  20. X-ray repair cross complementing protein 1 in base excision repair

    DEFF Research Database (Denmark)

    Hanssen-Bauer, Audun; Solvang-Garten, Karin; Akbari, Mansour;

    2012-01-01

    X-ray Repair Cross Complementing protein 1 (XRCC1) acts as a scaffolding protein in the converging base excision repair (BER) and single strand break repair (SSBR) pathways. XRCC1 also interacts with itself and rapidly accumulates at sites of DNA damage. XRCC1 can thus mediate the assembly of large...

  1. Base excision repair in sugarcane

    Directory of Open Access Journals (Sweden)

    Agnez-Lima Lucymara F.

    2001-01-01

    Full Text Available DNA damage can be induced by a large number of physical and chemical agents from the environment as well as compounds produced by cellular metabolism. This type of damage can interfere with cellular processes such as replication and transcription, resulting in cell death and/or mutations. The low frequency of mutagenesis in cells is due to the presence of enzymatic pathways which repair damaged DNA. Several DNA repair genes (mainly from bacteria, yeasts and mammals have been cloned and their products characterized. The high conservation, especially in eukaryotes, of the majority of genes related to DNA repair argues for their importance in the maintenance of life on earth. In plants, our understanding of DNA repair pathways is still very poor, the first plant repair genes having only been cloned in 1997 and the mechanisms of their products have not yet been characterized. The objective of our data mining work was to identify genes related to the base excision repair (BER pathway, which are present in the database of the Sugarcane Expressed Sequence Tag (SUCEST Project. This search was performed by tblastn program. We identified sugarcane clusters homologous to the majority of BER proteins used in the analysis and a high degree of conservation was observed. The best results were obtained with BER proteins from Arabidopsis thaliana. For some sugarcane BER genes, the presence of more than one form of mRNA is possible, as shown by the occurrence of more than one homologous EST cluster.

  2. DNA repair capacity of cultured human lymphocytes exposed to mutagens measured by the comet assay and array expression analysis.

    Science.gov (United States)

    Bausinger, Julia; Speit, Günter

    2015-11-01

    Repair of mutagen-induced DNA lesions during transportation, storage and cultivation of lymphocytes may have a significant impact on results obtained in human biomonitoring after occupational and environmental exposure of human populations to genotoxic chemicals. Using the comet assay in combination with the repair inhibitor aphidicolin and array gene expression analysis of 92 DNA repair genes, we investigated the repair of DNA lesions induced by methyl methanesulfonate (MMS) and benzo[a]pyrenediolepoxide (BPDE) in phytohaemagglutinin (PHA)-stimulated cultured human lymphocytes in the time segment before replication. The comet assay indicated fast repair of MMS-induced damage during the first hours of cultivation. In contrast, removal of BPDE-induced lesions was slower and significant amounts of damage seem to persist until S-phase. Gene expression analysis revealed that PHA stimulation had a clear effect on gene regulation in lymphocytes already during the first 18h of cultivation. Under the conditions of this study, genotoxic concentrations of MMS did not induce significant changes in gene expression. In contrast, exposure to BPDE led to altered expression of several genes in a time- and concentration-related manner. Of the significantly up-regulated genes, only two genes (XPA and XPC) were directly related to nucleotide excision repair. Our results suggest that PHA stimulation of human lymphocytes influences the expression of DNA repair genes in human lymphocytes. The effect of induced DNA damage on gene expression is comparatively low and depends on the mutagens used. PHA-stimulated lymphocytes repair induced DNA damage before they start to replicate but the repair activity during the first 18h of cultivation is not affected by changes in the expression of DNA repair genes during this period of time.

  3. The effects of altered fractionation schedules on the survival of human cell lines differing in their proliferative activity and repair capacity

    Energy Technology Data Exchange (ETDEWEB)

    Konefal, J.B.; Taylor, Y.C. (Washington Univ. School of Medicine, St. Louis, MO (USA))

    1989-11-01

    Plateau phase cultures of human cell lines were used as model systems to study the relative influences of proliferation and repair on the effectiveness of altered fractionation schedules. A human normal diploid fibroblast cell line (AG1522) which has a high capacity to repair potentially lethal radiation damage (PLD) and very little proliferative activity when grown to confluence was compared to human tumor cell lines which maintain significant cell-cycle activity in plateau phase. The human fibrosarcoma cell line, HT1080, used in the present study exhibited a much greater rate of turnover than the normal fibroblasts as determined from tritiated thymidine incorporation (5 day labeling index of 66% vs 20%) and no PLD repair, as determined by delayed plating experiments, in plateau phase. Twenty Gy were delivered to both cell lines over 5 days in 3 regimens: one 4 Gy fraction/day, two 2 Gy fractions/day with a 2 hr interval between doses, and two 2 Gy fractions/day with a 6 hr interval between doses. Although the normal fibroblasts demonstrated the greatest sparing between acute single doses and one 4 Gy fraction/day, there was little additional benefit (increased survival) from the increased dose fractionation. In contrast, the twice daily fractionation schedules resulted in significant differential sparing of the fibrosarcoma cells compared to the normal fibroblasts. With the 6 hr interval between doses, the survival advantages of the cell line with the slow turnover rate and high PLD repair capacity were completely lost. Split-dose experiments indicated slightly less sublethal damage repair in the fibrosarcoma cell line, but for both cell lines recovery was complete in 2 hr. DNA distributions were measured by flow cytometry and long term labeling index measurements performed in parallel with the multifraction radiation survival studies.

  4. BER for recommendations based on local popularity

    CERN Document Server

    Barman, Kishor

    2010-01-01

    Motivated by applications such as recommendation systems, we consider the estimation of a binary random field X obtained by row and column permutations of a block constant random matrix. The estimation of X is based on observations Y, which are obtained by passing entries of X through a binary symmetric channel (BSC) and an erasure channel. We focus on the analysis of a specific algorithm based on local popularity when the erasure rate approaches unity at a specified rate. We study the bit error rate (BER) in the limit as the matrix size approaches infinity. Our main result states that if the cluster size (that is, the size of the constancy blocks in the original matrix) is above a certain threshold, then the BER approaches zero, but below the threshold, the BER is lower bounded away from zero. The lower bound depends on the noise level in the observations and the size of the clusters in relation to the threshold. The threshold depends on the rate at which the erasure probability approaches unity.

  5. Genetic Variation in Base Excision Repair Pathway Genes, Pesticide Exposure, and Prostate Cancer Risk

    National Research Council Canada - National Science Library

    Kathryn Hughes Barry; Stella Koutros; Sonja I. Berndt; Gabriella Andreotti; Jane A. Hoppin; Dale P. Sandler; Laurie A. Burdette; Meredith Yeager; Laura E. Beane Freeman; Jay H. Lubin; Xiaomei Ma; Tongzhang Zheng; Michael C. R. Alavanja

    2011-01-01

    .... OBJECTIVES: Because base excision repair (BER) is the predominant pathway involved in repairing oxidative damage, we evaluated interactions between 39 pesticides and 394 tag single-nucleotide polymorphisms (SNPs...

  6. A Novel Uncoded SER/BER Estimation Method

    Directory of Open Access Journals (Sweden)

    Mahesh Patel

    2015-06-01

    Full Text Available Due to the rapidly increasing data speed requirement, it has become essential to smartly utilize the available frequency spectrum. In wireless communications systems, channel quality parameters are often used to enable resource allocation techniques that improve system capacity and user quality. The uncoded bit or symbol error rate (SER is specified as an important parameter in the second and third generation partnership project (3GPP. Nonetheless, techniques to estimate the uncoded SER are usually not much published. This paper introduces a novel uncoded bit error rate (BER estimation method using the accurate-bits sequence of the new channel codes over the AWGN channel. Here, we have used the new channel codes as a forward error correction coding scheme for our communication system. This paper also presents the simulation results to demonstrate and compare the estimation accuracy of the proposed method over the AWGN channel.

  7. Characterisation of Human Keratinocytes by Measuring Cellular Repair Capacity of UVB-Induced DNA Damage and Monitoring of Cytogenetic Changes in Melanoma Cell Lines

    Energy Technology Data Exchange (ETDEWEB)

    Greinert, R.; Breibart, E.W.; Mitchell, D.; Smida, J.; Volkmer, B

    2000-07-01

    The molecular mechanisms for UV-induced photocarcinogenesis are far from being understood in detail, especially in the case of malignant melanoma of the skin. Nevertheless, it is known that deficiencies in cellular repair processes of UV-induced DNA damage (e.g. in the case of Xeroderma pigmentosum) represent important aetiological factors in the multistep development of skin cancer. The repair kinetics have therefore been studied of an established skin cell line (HaCaT), primary human keratinocytes, melanocytes and melanoma cell lines, using fluorescence microscopy and flow cytometry. Our data show a high degree of interindividual variability in cellular repair capacity for UV-induced DNA lesions, which might be due to individual differences in the degree of tolerable damage and/or the onsets of saturation of the enzymatic repair system. The cytogenetic analysis of melanoma cell lines, using spectral karyotyping (SKY) furthermore proves that malignant melanoma of the skin are characterised by high numbers of chromosomal aberrations. (author)

  8. Are glutathione S transferases involved in DNA damage signalling? Interactions with DNA damage and repair revealed from molecular epidemiology studies

    Energy Technology Data Exchange (ETDEWEB)

    Dusinska, Maria, E-mail: Maria.DUSINSKA@nilu.no [CEE-Health Effects Group, NILU - Norwegian Institute for Air Research, Kjeller (Norway); Staruchova, Marta; Horska, Alexandra [Department of Experimental and Applied Genetics, Slovak Medical University, Bratislava (Slovakia); Smolkova, Bozena [Laboratory of Cancer Genetics, Cancer Research Institute of the Slovak Academy of Sciences, Bratislava (Slovakia); Collins, Andrew [Department of Nutrition, Faculty of Medicine, University of Oslo (Norway); Bonassi, Stefano [Unit of Clinical and Molecular Epidemiology, IRCCS San Raffaele Pisana, Rome (Italy); Volkovova, Katarina [Department of Experimental and Applied Genetics, Slovak Medical University, Bratislava (Slovakia)

    2012-08-01

    Glutathione S-transferases (GSTs) are members of a multigene family of isoenzymes that are important in the control of oxidative stress and in phase II metabolism. Acting non-enzymically, GSTs can modulate signalling pathways of cell proliferation, cell differentiation and apoptosis. Using a molecular epidemiology approach, we have investigated a potential involvement of GSTs in DNA damage processing, specifically the modulation of DNA repair in a group of 388 healthy adult volunteers; 239 with at least 5 years of occupational exposure to asbestos, stone wool or glass fibre, and 149 reference subjects. We measured DNA damage in lymphocytes using the comet assay (alkaline single cell gel electrophoresis): strand breaks (SBs) and alkali-labile sites, oxidised pyrimidines with endonuclease III, and oxidised purines with formamidopyrimidine DNA glycosylase. We also measured GST activity in erythrocytes, and the capacity for base excision repair (BER) in a lymphocyte extract. Polymorphisms in genes encoding three GST isoenzymes were determined, namely deletion of GSTM1 and GSTT1 and single nucleotide polymorphism Ile105Val in GSTP1. Consumption of vegetables and wine correlated negatively with DNA damage and modulated BER. GST activity correlated with oxidised bases and with BER capacity, and differed depending on polymorphisms in GSTP1, GSTT1 and GSTM1. A significantly lower BER rate was associated with the homozygous GSTT1 deletion in all asbestos site subjects and in the corresponding reference group. Multifactorial analysis revealed effects of sex and exposure in GSTP1 Ile/Val heterozygotes but not in Ile/Ile homozygotes. These variants affected also SBs levels, mainly by interactions of GSTP1 genotype with exposure, with sex, and with smoking habit; and by an interaction between sex and smoking. Our results show that GST polymorphisms and GST activity can apparently influence DNA stability and repair of oxidised bases, suggesting a potential new role for these

  9. BER of subcarrier MPSK and MDPSK systems in atmospheric turbulence

    KAUST Repository

    Song, Xuegui

    2015-01-01

    Bit-error rate (BER) performance of subcarrier $M$-ary phase-shift keying (MPSK) and $M$-ary differential PSK (MDPSK) is analyzed for optical wireless communications over Gamma-Gamma and lognormal turbulence channels. We study the relation between the exact BER and the approximate BER, which is obtained by dividing the symbol-error rate by the number of bits per symbol, for subcarrier MPSK and MDPSK modulations. The asymptotic BER performance gap between the exact and the approximate BERs is quantified analytically through our asymptotic analyses. The accuracy of the approximate BER of both MPSK and MDPSK depends on the channel conditions. Under weak turbulence conditions, the approximate BER expression can be used to predict the system performance with high accuracy, while under strong turbulence conditions the approximate BER becomes inaccurate and can only serve as a loose lower bound of the exact BER. The asymptotic BER performance loss of MDPSK with respect to MPSK is also quantified analytically.

  10. Lipman Bers, a life in mathematics

    CERN Document Server

    Keen, Linda; Rodríguez, Rubí E

    2015-01-01

    The book is part biography and part collection of mathematical essays that gives the reader a perspective on the evolution of an interesting mathematical life. It is all about Lipman Bers, a giant in the mathematical world who lived in turbulent and exciting times. It captures the essence of his mathematics, a development and transition from applied mathematics to complex analysis-quasiconformal mappings and moduli of Riemann surfaces-and the essence of his personality, a progression from a young revolutionary refugee to an elder statesman in the world of mathematics and a fighter for global h

  11. FACT Assists Base Excision Repair by Boosting the Remodeling Activity of RSC.

    Science.gov (United States)

    Charles Richard, John Lalith; Shukla, Manu Shubhdarshan; Menoni, Hervé; Ouararhni, Khalid; Lone, Imtiaz Nisar; Roulland, Yohan; Papin, Christophe; Ben Simon, Elsa; Kundu, Tapas; Hamiche, Ali; Angelov, Dimitar; Dimitrov, Stefan

    2016-07-01

    FACT, in addition to its role in transcription, is likely implicated in both transcription-coupled nucleotide excision repair and DNA double strand break repair. Here, we present evidence that FACT could be directly involved in Base Excision Repair and elucidate the chromatin remodeling mechanisms of FACT during BER. We found that, upon oxidative stress, FACT is released from transcription related protein complexes to get associated with repair proteins and chromatin remodelers from the SWI/SNF family. We also showed the rapid recruitment of FACT to the site of damage, coincident with the glycosylase OGG1, upon the local generation of oxidized DNA. Interestingly, FACT facilitates uracil-DNA glycosylase in the removal of uracil from nucleosomal DNA thanks to an enhancement in the remodeling activity of RSC. This discloses a novel property of FACT wherein it has a co-remodeling activity and strongly enhances the remodeling capacity of the chromatin remodelers. Altogether, our data suggest that FACT may acts in concert with RSC to facilitate excision of DNA lesions during the initial step of BER.

  12. Optical fiber communication — An overview

    Indian Academy of Sciences (India)

    M Arumugam

    2001-11-01

    This paper deals with the historical development of optical communication systems and their failures initially. Then the different generations in optical fiber communication along with their features are discussed. Some aspects of total internal reflection, different types of fibers along with their size and refractive index profile, dispersion and loss mechanisms are also mentioned. Finally the general system of optical fiber communication is briefly mentioned along with its advantages and limitations. Future soliton based optical fiber communication is also highlighted.

  13. Repair capacity of adult rat glial progenitor cells determined by an in vitro clonogenic assay after in vitro or in vivo fractionated irradiation

    Energy Technology Data Exchange (ETDEWEB)

    Maazen, R.W.M. van der; Kleiboer, B.J.; Verhagen, I.; Kogel, A.J. van der (Nijmegen Univ. (Netherlands). Inst. of Radiotherapy)

    1993-05-01

    Demyelination is one condition identified as a late response of the central nervous system (CNS) to irradiation. In the present study the repair capacity of glial stem cells was investigated and compared with the repair capacity of the CNS in vivo using functional endpoints. For this purpose, glial stem cells, derived from the adult rat optic nerve, were subjected to fractionated irradiation in vivo and in vitro and their survival was quantified with an in vitro clonogenic assay. The data were analysed by three different methods all based on the LQ-model (single dose survival curve; '[beta][sub RR]', 'F[sub e]-plot'). The resulting value of the [beta]-parameter of adult glial stem cells is consistent with values obtained for functional endpoints after irradiation of the CNS in vivo. The [alpha]/[beta]-ratio (4.9-7.3 Gy) of adult glial stem cells, however, is higher than the [alpha]/[beta]-ratio ([approx] 2 Gy) obtained for CNS in vivo and is closer to that of an acute responding tissue. (Author).

  14. Multiscale Computation. Needs and Opportunities for BER Science

    Energy Technology Data Exchange (ETDEWEB)

    Scheibe, Timothy D. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Smith, Jeremy C. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States)

    2015-01-01

    The Environmental Molecular Sciences Laboratory (EMSL), a scientific user facility managed by Pacific Northwest National Laboratory for the U.S. Department of Energy, Office of Biological and Environmental Research (BER), conducted a one-day workshop on August 26, 2014 on the topic of “Multiscale Computation: Needs and Opportunities for BER Science.” Twenty invited participants, from various computational disciplines within the BER program research areas, were charged with the following objectives; Identify BER-relevant models and their potential cross-scale linkages that could be exploited to better connect molecular-scale research to BER research at larger scales and; Identify critical science directions that will motivate EMSL decisions regarding future computational (hardware and software) architectures.

  15. Discussion on improving the production capacity of coal mine repair factory%浅谈如何提高煤矿机修厂生产能力

    Institute of Scientific and Technical Information of China (English)

    于忠涛

    2016-01-01

    在国有大中型煤矿中,为了节约外委维修资金和维修时间,保障机电设备的完好率和开工率,大都配备有一个专门修复设备和加工零部件的小型机加工厂,一般称之为机修厂。本文通过对影响煤矿机修厂生产的因素进行分析,提出了一些提高生产能力的办法。%In the large and medium-sized state-owned coal mines, in order to save outsourcing maintenance funds and maintenance time, ensure electromechanical equipment intact rate and utilization rate, are equipped with a special repair equipment and processing parts of the small processing plants, commonly known as jixiuan. Based on the factors affecting the production of coal mine machinery repair are analyzed, and puts forward some measures to improve the production capacity.

  16. A quantitative model of human DNA base excision repair. I. mechanistic insights

    OpenAIRE

    Sokhansanj, Bahrad A.; Rodrigue, Garry R.; Fitch, J. Patrick; David M Wilson

    2002-01-01

    Base excision repair (BER) is a multistep process involving the sequential activity of several proteins that cope with spontaneous and environmentally induced mutagenic and cytotoxic DNA damage. Quantitative kinetic data on single proteins of BER have been used here to develop a mathematical model of the BER pathway. This model was then employed to evaluate mechanistic issues and to determine the sensitivity of pathway throughput to altered enzyme kinetics. Notably, the model predicts conside...

  17. Overexpression of DNA ligase III in mitochondria protects cells against oxidative stress and improves mitochondrial DNA base excision repair

    DEFF Research Database (Denmark)

    Akbari, Mansour; Keijzers, Guido; Maynard, Scott

    2014-01-01

    slower than the preceding mitochondrial BER steps. Overexpression of DNA ligase III in mitochondria improved the rate of overall BER, increased cell survival after menadione induced oxidative stress and reduced autophagy following the inhibition of the mitochondrial electron transport chain complex I...... by rotenone. Our results suggest that the amount of DNA ligase III in mitochondria may be critical for cell survival following prolonged oxidative stress, and demonstrate a functional link between mitochondrial DNA damage and repair, cell survival upon oxidative stress, and removal of dysfunctional......Base excision repair (BER) is the most prominent DNA repair pathway in human mitochondria. BER also results in a temporary generation of AP-sites, single-strand breaks and nucleotide gaps. Thus, incomplete BER can result in the generation of DNA repair intermediates that can disrupt mitochondrial...

  18. Alfredo Häberli ja Iittala : Senta / Piret Veigel

    Index Scriptorium Estoniae

    Veigel, Piret, 1961-

    2004-01-01

    Jaanuaris Pariisi messil Maison & Objet aasta disaineriks kuulutatud Alfredo Häberli esitles veebruaris Frankfurdi messil Ambiente oma neljandat ühisprojekti Soome Iittalaga: Senta-nimelisi valge, punase ja vahuveini klaase

  19. Alfredo Häberli ja Iittala : Senta / Piret Veigel

    Index Scriptorium Estoniae

    Veigel, Piret, 1961-

    2004-01-01

    Jaanuaris Pariisi messil Maison & Objet aasta disaineriks kuulutatud Alfredo Häberli esitles veebruaris Frankfurdi messil Ambiente oma neljandat ühisprojekti Soome Iittalaga: Senta-nimelisi valge, punase ja vahuveini klaase

  20. BER Analysis Of IEEE802.11n MIMO System Using MMSE And ZF Detectors

    Directory of Open Access Journals (Sweden)

    Ye Lwin Oo

    2015-06-01

    Full Text Available Abstract With the increasing demand of higher data rate for telecommunication the IEEE802.11n standard was constituted in 2009. The most important character of the standard is MIMO-OFDM which not only improves the throughput but also the spectrum efficiency and channel capacity. And in wireless communication the role of MIMO detectors plays an important part to remove inter-symbol interference ISI caused by multipath fading channel. In this paper the BER performance of IEEE 802.11n for 3x2 4x2 and 4x3 antennas are compared using MMSE and ZF detectors in Matlab Simulink.

  1. Base excision repair activities in organotypic hippocampal slice cultures exposed to oxygen and glucose deprivation.

    Science.gov (United States)

    Rolseth, Veslemøy; Rundén-Pran, Elise; Neurauter, Christine Gran; Yndestad, Arne; Luna, Luisa; Aukrust, Pål; Ottersen, Ole Petter; Bjørås, Magnar

    2008-06-01

    The capacity for DNA repair is likely to be one of the factors that determine the vulnerability of neurons to ischemic stress and may influence the pathological outcome of stroke. In this report, initiation of base excision repair (BER) was assessed by analysis of enzyme activity and gene expression level of DNA glycosylases and AP-endonucleases in rat organotypic hippocampal slice cultures exposed to oxygen and glucose deprivation (OGD) - an in vitro model of stroke. Under basal conditions, AP-endonuclease activity and base removal of ethenoadenine and 8-oxoguanine (8-oxoG) were higher (by approximately 20-35 %) in CA3/fascia dentata (FD) than in CA1. Base removal of uracil did not differ between the two hippocampal regions, while removal of 5-hydroxyuracil (5-OHU) was slightly less efficient in CA3/FD than in CA1. Analyses performed immediately after 30 min of OGD revealed a decreased AP-endonuclease activity (by approximately 20%) in CA1 as well as CA3/FD, and an increased ethenoadenine activity (by approximately 25%) in CA1. Activities for 8-oxoG, 5-OHU and uracil showed no significant changes at this time point. At 8h after OGD, none of the enzyme activities differed from control values. Real-time RT-PCR showed that transcription of DNA glycosylases, including Ogg1, Nth1, Ung, Aag, Neil1 and Neil2 were not changed in response to OGD treatment (t=0 h). The hippocampal expression of Neil2 was low compared with the other DNA glycosylases. These data indicate that CA1 has a lower capacity than CA3/FD for removal of base lesions under basal conditions. The relatively low capacity for BER in basal conditions and the apparent failure to upregulate repair of oxidative damage after OGD might contribute to the high vulnerability of CA1 to ischemic injury.

  2. Mammalian Base Excision Repair: Functional Partnership between PARP-1 and APE1 in AP-Site Repair.

    Directory of Open Access Journals (Sweden)

    Rajendra Prasad

    Full Text Available The apurinic/apyrimidinic- (AP- site in genomic DNA arises through spontaneous base loss and base removal by DNA glycosylases and is considered an abundant DNA lesion in mammalian cells. The base excision repair (BER pathway repairs the AP-site lesion by excising and replacing the site with a normal nucleotide via template directed gap-filling DNA synthesis. The BER pathway is mediated by a specialized group of proteins, some of which can be found in multiprotein complexes in cultured mouse fibroblasts. Using a DNA polymerase (pol β immunoaffinity-capture technique to isolate such a complex, we identified five tightly associated and abundant BER factors in the complex: PARP-1, XRCC1, DNA ligase III, PNKP, and Tdp1. AP endonuclease 1 (APE1, however, was not present. Nevertheless, the complex was capable of BER activity, since repair was initiated by PARP-1's AP lyase strand incision activity. Addition of purified APE1 increased the BER activity of the pol β complex. Surprisingly, the pol β complex stimulated the strand incision activity of APE1. Our results suggested that PARP-1 was responsible for this effect, whereas other proteins in the complex had no effect on APE1 strand incision activity. Studies of purified PARP-1 and APE1 revealed that PARP-1 was able to stimulate APE1 strand incision activity. These results illustrate roles of PARP-1 in BER including a functional partnership with APE1.

  3. Soliton models in resonant and nonresonant optical fibers

    Indian Academy of Sciences (India)

    K Porsezian

    2001-11-01

    In this review, considering the important linear and nonlinear optical effects like group velocity dispersion, higher order dispersion, Kerr nonlinearity, self-steepening, stimulated Raman scattering, birefringence, self-induced transparency and various inhomogeneous effects in fibers, the completely integrable concept and bright, dark and self-induced transparency soliton models in nonlinear fiber optics are discussed. Considering the above important optical effects, the different completely integrable soliton models in the form of nonlinear Schrödinger (NLS), NLS-MaxwellBloch (MB) type equations reported in the literature are discussed. Finally, solitons in stimulated Raman scattering (SRS) system is briefly discussed.

  4. BER of subcarrier MPSK/MDPSK modulated OWC systems in Gamma-Gamma turbulence

    KAUST Repository

    Song, Xuegui

    2013-12-01

    Bit-error rate (BER) performance of subcarrier Mary phase-shift keying (MPSK) and M-ary differential PSK (MDPSK) is analyzed for optical wireless communications in Gamma-Gamma turbulence. We study the relation between the exact BER and the approximate BER, which is obtained by dividing the symbol error rate by the number of bits per symbol, for subcarrier MPSK and MDPSK modulations. The asymptotic performance gap between the exact and the approximate BERs is quantified analytically through our asymptotic analyses. The accuracy of the approximate BER of both MPSK and MDPSK depends on the channel conditions. Under weak turbulence conditions, the approximate BER expression can be used to predict the system performance with high accuracy, while under strong turbulence conditions the approximate BER becomes inaccurate and can only serve as a loose lower bound of the exact BER. The asymptotic BER performance loss of MDPSK with respect to MPSK is also quantified analytically. © 2013 IEEE.

  5. Participation of stress-inducible systems and enzymes involved in BER and NER in the protection of Escherichia coli against cumene hydroperoxide.

    Science.gov (United States)

    Asad, L M; Medeiros, D C; Felzenszwalb, I; Leitão, A C; Asad, N R

    2000-09-15

    We studied the participation of the stress-inducible systems, as the OxyR, SoxRS and SOS regulons in the protection of Escherichia coli cells against lethal effects of cumene hydroperoxide (CHP). Moreover, we evaluated the participation of BER and NER in the repair of the DNA damage produced by CHP. Our results suggest that the hypersensitivity observed in the oxyR mutants to the lethal effect of CHP does not appear to be due to SOS inducing DNA lesions, but rather to cell membrane damage. On the other hand, DNA damage induced by CHP appears to be repaired by enzymes involved in BER and NER pathways. In this case, Fpg protein and UvrABC complex could be involved cooperatively in the elimination of a specific DNA lesion. Finally, we have detected the requirement for the uvrA gene function in SOS induction by CHP treatment.

  6. Unraveling the Mystery of Stöber Silica's Microporosity.

    Science.gov (United States)

    Li, Shanshan; Wan, Quan; Qin, Zonghua; Fu, Yuhong; Gu, Yuantao

    2016-09-13

    Puzzling aspects of the microporous structure of Stöber silica, including inconsistencies in the BET specific surface area and the long measurement time required for N2 adsorption, hinder further research on and potential applications of this material. In this work, Stöber silica samples prepared using systematic and detailed post-treatment methods were characterized by N2 adsorption, scanning electron microscopy, transmission electron microscopy, inductively coupled plasma optical emission spectrometry, elemental analysis, and Fourier transform infrared spectroscopy. We have found that the often overlooked sample preparation conditions may be the main causes that perplex the gas adsorption characterization results of Stöber silica samples. The pore-blocking processes associated with a variety of sample treatment methods are discussed in detail. Strong evidence for the particle growth model and pore-blocking mechanism involving ethoxyl groups, Si species, and condensation of silanols is provided. A remarkable result is that the measurement time is shortened from 1 month in our previous work to 2-3 days for samples with large specific surface areas. A suitable post-treatment condition is recommended to obtain microporous Stöber silica with a short measurement time, including water washing, low temperature drying without a vacuum, and a short storage time.

  7. WEIGHTED COMPOSITION OPERATORS BETWEEN BERS-TYPE SPACES AND BERGMAN SPACES

    Institute of Scientific and Technical Information of China (English)

    Tang Xiaomin

    2007-01-01

    This paper characterizes the boundedness and compactness of weighted composition operators between Bers-type space (or little Bers-type space) and Bergman space. Some estimates for the norm of weighted composition operators between those spaces are obtained.

  8. Effect of environmental factors and cell physiological state on Pulsed Electric Fields resistance and repair capacity of various strains of Escherichia coli.

    Science.gov (United States)

    Somolinos, M; García, D; Mañas, P; Condón, S; Pagán, R

    2008-06-10

    The aim was to determine the resistance variation of four strains of Escherichia coli to Pulsed Electric Fields (PEF), the role of the sigma factor RpoS in PEF resistance, as well as the influence of several environmental factors and the cell physiological state on the PEF resistance and repair capacity. The rpoS null mutant, E. coli BJ4L1, exhibited decreased PEF resistance as compared with its wild-type parent, BJ4. W3110 and O157:H7 were the most PEF-resistant strains: whereas 2 and more than 3 Log10 cycles of BJ4 and BJ4L1 cells, respectively, were inactivated after 50 pulses at 35 kV/cm, only 0.5 Log10 cycle of inactivation of W3110 and O157:H7 was attained. A different pattern was observed and the resistance variation among strains was largely reduced, when selective recovery media were used. At exponential growth phase, the resistance of the four strains was lower, and more than 4 Log10 cycles of inactivation of all strains tested were attained at 30 kV/cm. Previous heat and cold shock treatments scarcely influenced cell PEF resistance. PEF survival increased with the reduction in water activity of the treatment medium to 0.94: the occurrence of sublethally injured cells was negligible, and less than 1 Log10 cycle of inactivation was attained at 35 kV/cm. PEF-treated cells were sensitive to a subsequent storage at pH 4.0 or in the presence of sorbic acid, attaining a final inactivation of 4-5 Log10 cycles after 24 hour-incubation. In conclusion, the work confirms the role of rpoS in PEF resistance. E. coli strains exhibit large differences in PEF resistance. These differences were less important when cells were recovered under selective conditions. Both resistance variation among strains and occurrence of sublethal damage were noticeably influenced by the environmental factors tested.

  9. Synthetic lethal targeting of DNA double strand break repair deficient cells by human apurinic/apyrimidinic endonuclease (APE1) inhibitors

    OpenAIRE

    Sultana, Rebeka; McNeill, Daniel R.; Abbotts, Rachel; Mohammed, Mohammed Z.; Zdzienicka, Małgorzata Z.; Qutob, Haitham; Seedhouse, Claire; Charles A. Laughton; Fischer, Peter M.; Patel, Poulam M.; Wilson, David M.; Madhusudan, Srinivasan

    2012-01-01

    An apurinic/apyrimidinic (AP) site is an obligatory cytotoxic intermediate in DNA Base Excision Repair (BER) that is processed by human AP endonuclease 1 (APE1). APE1 is essential for BER and an emerging drug target in cancer. We have isolated novel small molecule inhibitors of APE1. In the current study we have investigated the ability of APE1 inhibitors to induce synthetic lethality in a panel of DNA double strand break (DSB) repair deficient and proficient cells; a) Chine...

  10. Nuclear translocation contributes to regulation of DNA excision repair activities

    DEFF Research Database (Denmark)

    Knudsen, Nina Østergaard; Andersen, Sofie Dabros; Lützen, Anne;

    2009-01-01

    , it is evident that proteins from the different DNA repair pathways interact [Y. Wang, D. Cortez, P. Yazdi, N. Neff, S.J. Elledge, J. Qin, BASC, a super complex of BRCA1-associated proteins involved in the recognition and repair of aberrant DNA structures, Genes Dev. 14 (2000) 927-939; M. Christmann, M......DNA mutations are circumvented by dedicated specialized excision repair systems, such as the base excision repair (BER), nucleotide excision repair (NER), and mismatch repair (MMR) pathways. Although the individual repair pathways have distinct roles in suppressing changes in the nuclear DNA.......T. Tomicic, W.P. Roos, B. Kaina, Mechanisms of human DNA repair: an update, Toxicology 193 (2003) 3-34; N.B. Larsen, M. Rasmussen, L.J. Rasmussen, Nuclear and mitochondrial DNA repair: similar pathways? Mitochondrion 5 (2005) 89-108]. Protein interactions are not only important for function, but also...

  11. Chromatin remodelling complex RSC promotes base excision repair in chromatin of Saccharomyces cerevisiae.

    Science.gov (United States)

    Czaja, Wioletta; Mao, Peng; Smerdon, Michael J

    2014-04-01

    The base excision repair (BER) pathway is a conserved DNA repair system required to maintain genomic integrity and prevent mutagenesis in all eukaryotic cells. Nevertheless, how BER operates in vivo (i.e. in the context of chromatin) is poorly understood. We have investigated the role of an essential ATP-dependent chromatin remodelling (ACR) complex RSC (Remodels the Structure of Chromatin) in BER of intact yeast cells. We show that depletion of STH1, the ATPase subunit of RSC, causes enhanced sensitivity to the DNA alkylating agent methyl methanesulfonate (MMS) and results in a substantial inhibition of BER, at the GAL1 locus and in the genome overall. Consistent with this observation, the DNA in chromatin is less accessible to micrococcal nuclease digestion in the absence of RSC. Quantitative PCR results indicate that repair deficiency in STH1 depleted cells is not due to changes in the expression of BER genes. Collectively, our data indicates the RSC complex promotes efficient BER in chromatin. These results provide, for the first time, a link between ATP-dependent chromatin remodelling and BER in living cells.

  12. SIRT6 rescues the age related decline in base excision repair in a PARP1-dependent manner

    Science.gov (United States)

    Xu, Zhu; Zhang, Lei; Zhang, Wenjun; Meng, Du; Zhang, Hongxia; Jiang, Ying; Xu, Xiaojun; Van Meter, Michael; Seluanov, Andrei; Gorbunova, Vera; Mao, Zhiyong

    2015-01-01

    In principle, a decline in base excision repair (BER) efficiency with age should lead to genomic instability and ultimately contribute to the onset of the aging phenotype. Although multiple studies have indicated a negative link between aging and BER, the change of BER efficiency with age in humans has not been systematically analyzed. Here, with foreskin fibroblasts isolated from 19 donors between 20 and 64 y of age, we report a significant decline of BER efficiency with age using a newly developed GFP reactivation assay. We further observed a very strong negative correlation between age and the expression levels of SIRT6, a factor which is known to maintain genomic integrity by improving DNA double strand break (DSB) repair. Our mechanistic study suggests that, similar to the regulatory role that SIRT6 plays in DNA DSB repair, SIRT6 regulates BER in a PARP1-depdendent manner. Moreover, overexpression of SIRT6 rescues the decline of BER in aged fibroblasts. In summary, our results uncovered the regulatory mechanisms of BER by SIRT6, suggesting that SIRT6 reactivation in aging tissues may help delay the process of aging through improving BER. PMID:25607651

  13. Energy-efficient cooperative routing in BER constrained multihop networks

    Institute of Scientific and Technical Information of China (English)

    Behrouz MAHAM; Mérouane DEBBAH; Are HJ(φ)RUNGNES

    2009-01-01

    Due to the limited energy supplies of nodes, in many applications like wireless sensor networks energy-efficiency is crucial for extending the lifetime of these net-works. We study the routing problem for multihop wireless ad hoc networks based on cooperative transmission. The source node wants to transmit messages to a single destina-tion. Other nodes in the network may operate as relay nodes.In this paper, we propose a cooperative multihop routing for the purpose of power savings, constrained on a required bit error rate (BER) at the destination. We derive analytical re-sults for line and grid network topologies. It is shown that energy savings of 100% are achievable in line and grid net-works with a large number of nodes for BER = 10-4 con-straint at the destination.

  14. Dynamic Frequency Allocation in SLICE Considering both BER and Distance

    Directory of Open Access Journals (Sweden)

    Xin Chen

    2012-11-01

    Full Text Available Proposed in this paper is a dynamic resource-aware routing and frequency slots allocation scheme with consideration of both BER requirement and distance adaptive modulation (RA-BERR-DA for spectrum-sliced elastic optical path networks (SLICE.Numerical simulations are conducted to analysis network performance such as blocking rate and the number of used frequency slots. The results demonstrate that this scheme is able to decrease traffic blocking and improve resource utilization in dynamic spectrum assignment.

  15. Study of bit error rate (BER) for multicarrier OFDM

    Science.gov (United States)

    Alshammari, Ahmed; Albdran, Saleh; Matin, Mohammad

    2012-10-01

    Orthogonal Frequency Division Multiplexing (OFDM) is a multicarrier technique that is being used more and more in recent wideband digital communications. It is known for its ability to handle severe channel conditions, the efficiency of spectral usage and the high data rate. Therefore, It has been used in many wired and wireless communication systems such as DSL, wireless networks and 4G mobile communications. Data streams are modulated and sent over multiple subcarriers using either M-QAM or M-PSK. OFDM has lower inter simple interference (ISI) levels because of the of the low data rates of carriers resulting in long symbol periods. In this paper, BER performance of OFDM with respect to signal to noise ratio (SNR) is evaluated. BPSK Modulation is used in s Simulation based system in order to get the BER over different wireless channels. These channels include additive white Gaussian Noise (AWGN) and fading channels that are based on Doppler spread and Delay spread. Plots of the results are compared with each other after varying some of the key parameters of the system such as the IFFT, number of carriers, SNR. The results of the simulation give visualization of what kind of BER to expect when the signal goes through those channels.

  16. Early Steps in the DNA Base Excision Repair Pathway of a Fission Yeast Schizosaccharomyces pombe

    Directory of Open Access Journals (Sweden)

    Kyoichiro Kanamitsu

    2010-01-01

    Full Text Available DNA base excision repair (BER accounts for maintaining genomic integrity by removing damaged bases that are generated endogenously or induced by genotoxic agents. In this paper, we describe the roles of enzymes functioning in the early steps of BER in fission yeast. Although BER is an evolutionarily conserved process, some unique features of the yeast repair pathway were revealed by genetic and biochemical approaches. AP sites generated by monofunctional DNA glycosylases are incised mainly by AP lyase activity of Nth1p, a sole bifunctional glycosylase in yeast, to leave a blocked 3′ end. The major AP endonuclease Apn2p functions predominantly in removing the 3′ block. Finally, a DNA polymerase fills the gap, and a DNA ligase seals the nick (Nth1p-dependent or short patch BER. Apn1p backs up Apn2p. In long patch BER, Rad2p endonuclease removes flap DNA containing a lesion after DNA synthesis. A UV-specific endonuclease Uve1p engages in an alternative pathway by nicking DNA on the 5′ side of oxidative damage. Nucleotide excision repair and homologous recombination are involved in repair of BER intermediates including the AP site and single-strand break with the 3′ block. Other enzymes working in 3′ end processing are also discussed.

  17. CSO/CTB/BER performances improvement in a bi-directional hybrid DWDM system

    Institute of Scientific and Technical Information of China (English)

    Hai-Han Lu(吕海涵); Hsu-Hung Huang(黄旭弘); Ming-Chuan Wang(王明傅); Heng-Sheng Su(蘇(恒)生)

    2003-01-01

    Experimental verifications of the feasibility of using chirped fiber grating (CFG) as the dispersion compen-sation device in a bi-directional hybrid dense-wavelength-division-multiplexing (DWDM) system to reducethe dispersion and cross-phase modulation (XPM) induced crosstalk were proposed and demonstrated.Not only channel capacity was increased, but also good performances of carrier-to-noise ratio (CNR) ≥ 50dB, composite second order (CSO) ≥72 dB, composite triple beat (CTB) ≥69 dB and low bit error rate(BER) < 10-9 were achieved in our proposed system over a 50-km single-mode fiber (SMF) transport.

  18. BER Performance Evaluation of two Types of Antenna Array-Based Receivers in a Multipath Channel

    Directory of Open Access Journals (Sweden)

    Rim Haddad

    2010-11-01

    Full Text Available Smart antennasystems have received much attention in the last few years because they can increasesystem capacity by dynamically tuning out interference while focusing on the intended user.In this paper, we focused our research on the performance of two kinds of smart antenna receivers. Ananalytical model is proposed for evaluating the BER performance using a closed-form expression. Also,for the adaptive array, a simple way to account the multi-access interference can be exploited to evaluatethe average probability of error when the users are randomly distributed within an angular sector.The proposed model confirms the benefits of adaptive antennas in reducing the overall interference level(intercell/intracell and to find an accurate approximation of the error probability.In the two kinds of receivers, we assessed the impact of smart antenna systems and we considered thecase of conventional single antenna receiver model as reference (single user/single antenna.

  19. BER analysis of MPSK space-time code with differential detection over correlated block-fading Rayleigh channel

    Institute of Scientific and Technical Information of China (English)

    ZOU Yu-long; ZHENG Bao-yu

    2008-01-01

    MIMO technology proposed in recent years can effectively combat the multipath fading of wireless channel and can considerably enlarge the channel capacity, which has been investigated widely by researchers. However, its performance analysis over correlated block-fading Rayleigh channel is still an open and challenging objective. In this article, an analytic expression of bit error rate (BER) is presented for multiple phase shift keying (MPSK) space-time code, with differential detection over correlated block-fading Rayleigh channel. Through theoretical analysis of BER, it can be found that the differential space-time scheme without the need for channel state information (CSI) at receiver achieves distinct performance gain compared with the traditional nonspace-time system. And then, the system simulation is complimented to verify the above result, showing that the diversity system based on the differential space-time block coding (DSTBC) outperforms the traditional nonspace- time system with diversity gain in terms of BER. Furthermore, the numerical results also demonstrate that the error floor of the differential space-time system is much lower than that of the differential nonspace-time system.

  20. SNR and BER Models and the Simulation for BER Performance of Selected Spectral Amplitude Codes for OCDMA

    Directory of Open Access Journals (Sweden)

    Abdul Latif Memon

    2014-01-01

    Full Text Available Many encoding schemes are used in OCDMA (Optical Code Division Multiple Access Network but SAC (Spectral Amplitude Codes is widely used. It is considered an effective arrangement to eliminate dominant noise called MAI (Multi Access Interference. Various codes are studied for evaluation with respect to their performance against three noises namely shot noise, thermal noise and PIIN (Phase Induced Intensity Noise. Various Mathematical models for SNR (Signal to Noise Ratios and BER (Bit Error Rates are discussed where the SNRs are calculated and BERs are computed using Gaussian distribution assumption. After analyzing the results mathematically, it is concluded that ZCC (Zero Cross Correlation Code performs better than the other selected SAC codes and can serve larger number of active users than the other codes do. At various receiver power levels, analysis points out that RDC (Random Diagonal Code also performs better than the other codes. For the power interval between -10 and -20 dBm performance of RDC is better ZCC. Their lowest BER values suggest that these codes should be part of an efficient and cost effective OCDM access network in the future.

  1. Databases and Bioinformatics Tools for the Study of DNA Repair

    Directory of Open Access Journals (Sweden)

    Kaja Milanowska

    2011-01-01

    Full Text Available DNA is continuously exposed to many different damaging agents such as environmental chemicals, UV light, ionizing radiation, and reactive cellular metabolites. DNA lesions can result in different phenotypical consequences ranging from a number of diseases, including cancer, to cellular malfunction, cell death, or aging. To counteract the deleterious effects of DNA damage, cells have developed various repair systems, including biochemical pathways responsible for the removal of single-strand lesions such as base excision repair (BER and nucleotide excision repair (NER or specialized polymerases temporarily taking over lesion-arrested DNA polymerases during the S phase in translesion synthesis (TLS. There are also other mechanisms of DNA repair such as homologous recombination repair (HRR, nonhomologous end-joining repair (NHEJ, or DNA damage response system (DDR. This paper reviews bioinformatics resources specialized in disseminating information about DNA repair pathways, proteins involved in repair mechanisms, damaging agents, and DNA lesions.

  2. Human longevity and variation in DNA damage response and repair

    DEFF Research Database (Denmark)

    Debrabant, Birgit; Soerensen, Mette; Flachsbart, Friederike

    2014-01-01

    others. Data were applied on 592 SNPs from 77 genes involved in nine sub-processes: DNA-damage response, base excision repair (BER), nucleotide excision repair, mismatch repair, non-homologous end-joining, homologous recombinational repair (HRR), RecQ helicase activities (RECQ), telomere functioning...... and mitochondrial DNA processes. The study population was 1089 long-lived and 736 middle-aged Danes. A self-contained set-based test of all SNPs displayed association with longevity (P-value=9.9 × 10-5), supporting that the overall pathway could affect longevity. Investigation of the nine sub-processes using...

  3. Choreography of oxidative damage repair in mammalian genomes.

    Science.gov (United States)

    Mitra, Sankar; Izumi, Tadahide; Boldogh, Istvan; Bhakat, Kishor K; Hill, Jeff W; Hazra, Tapas K

    2002-07-01

    The lesions induced by reactive oxygen species in both nuclear and mitochondrial genomes include altered bases, abasic (AP) sites, and single-strand breaks, all repaired primarily via the base excision repair (BER) pathway. Although the basic BER process (consisting of five sequential steps) could be reconstituted in vitro with only four enzymes, it is now evident that repair of oxidative damage, at least in mammalian cell nuclei, is more complex, and involves a number of additional proteins, including transcription- and replication-associated factors. These proteins may be required in sequential repair steps in concert with other cellular changes, starting with nuclear targeting of the early repair enzymes in response to oxidative stress, facilitation of lesion recognition, and access by chromatin unfolding via histone acetylation, and formation of metastable complexes of repair enzymes and other accessory proteins. Distinct, specific subclasses of protein complexes may be formed for repair of oxidative lesions in the nucleus in transcribed vs. nontranscribed sequences in chromatin, in quiescent vs. cycling cells, and in nascent vs. parental DNA strands in replicating cells. Characterizing the proteins for each repair subpathway, their signaling-dependent modifications and interactions in the nuclear as well as mitochondrial repair complexes, will be a major focus of future research in oxidative damage repair.

  4. Base excision repair of 8-oxoG in dinucleosomes

    NARCIS (Netherlands)

    H. Menoni (Hervé); M.S. Shukla (Manu Shubhdarshan); V. Gerson (Véronique); S. Dimitrov (Stefan); D. Angelov (Dimitar)

    2012-01-01

    textabstractIn this work we have studied the effect of chromatin structure on the base excision repair (BER) efficiency of 8-oxoG. As a model system we have used precisely positioned dinucleosomes assembled with linker histone H1. A single 8-oxoG was inserted either in the linker or the core particl

  5. Confirmatory Factor Analysis of the Behavioral and Emotional Rating Scale-2 (BERS-2) Parent and Youth Rating Scales

    Science.gov (United States)

    Buckley, Jacquelyn A.; Ryser, Gail; Reid, Robert; Epstein, Michael H.

    2006-01-01

    We confirmed the factor structure of the Behavioral and Emotional Rating Scale-2nd Edition (BERS-2) with a normative parent and youth sample. The BERS-2, based on the Behavioral and Emotional Rating Scale (BERS), is a standardized instrument that assesses children's emotional and behavioral strengths. The original BERS was renormed to create a…

  6. DNA repair in neurons: So if they don't divide what's to repair?

    Energy Technology Data Exchange (ETDEWEB)

    Fishel, Melissa L. [Department of Pediatrics (Section of Hematology/Oncology), Herman B Wells Center for Pediatric Research, Indiana University School of Medicine, 1044 W. Walnut, Room 302C, Indianapolis, IN 46202 (United States); Vasko, Michael R. [Department of Pharmacology and Toxicology, Indiana University School of Medicine, 1044 W. Walnut St., Indianapolis, IN 46202 (United States); Kelley, Mark R. [Department of Pediatrics (Section of Hematology/Oncology), Herman B Wells Center for Pediatric Research, Indiana University School of Medicine, 1044 W. Walnut, Room 302C, Indianapolis, IN 46202 (United States) and Department of Pharmacology and Toxicology, Indiana University School of Medicine, 1044 W. Walnut St., Indianapolis, IN 46202 (United States) and Department of Biochemistry and Molecular Biology, Indiana University School of Medicine, 1044 W. Walnut, Room 302C, Indianapolis, IN 46202 (United States)]. E-mail: mkelley@iupui.edu

    2007-01-03

    Neuronal DNA repair remains one of the most exciting areas for investigation, particularly as a means to compare the DNA repair response in mitotic (cancer) vs. post-mitotic (neuronal) cells. In addition, the role of DNA repair in neuronal cell survival and response to aging and environmental insults is of particular interest. DNA damage caused by reactive oxygen species (ROS) such as generated by mitochondrial respiration includes altered bases, abasic sites, and single- and double-strand breaks which can be prevented by the DNA base excision repair (BER) pathway. Oxidative stress accumulates in the DNA of the human brain over time especially in the mitochondrial DNA (mtDNA) and is proposed to play a critical role in aging and in the pathogenesis of several neurological disorders including Parkinson's disease, ALS, and Alzheimer's diseases. Because DNA damage accumulates in the mtDNA more than nuclear DNA, there is increased interest in DNA repair pathways and the consequence of DNA damage in the mitochondria of neurons. The type of damage that is most likely to occur in neuronal cells is oxidative DNA damage which is primarily removed by the BER pathway. Following the notion that the bulk of neuronal DNA damage is acquired by oxidative DNA damage and ROS, the BER pathway is a likely area of focus for neuronal studies of DNA repair. BER variations in brain aging and pathology in various brain regions and tissues are presented. Therefore, the BER pathway is discussed in greater detail in this review than other repair pathways. Other repair pathways including direct reversal, nucleotide excision repair (NER), mismatch repair (MMR), homologous recombination and non-homologous end joining are also discussed. Finally, there is a growing interest in the role that DNA repair pathways play in the clinical arena as they relate to the neurotoxicity and neuropathy associated with cancer treatments. Among the numerous side effects of cancer treatments, major

  7. DNA polymerases beta and lambda mediate overlapping and independent roles in base excision repair in mouse embryonic fibroblasts.

    Directory of Open Access Journals (Sweden)

    Elena K Braithwaite

    Full Text Available Base excision repair (BER is a DNA repair pathway designed to correct small base lesions in genomic DNA. While DNA polymerase beta (pol beta is known to be the main polymerase in the BER pathway, various studies have implicated other DNA polymerases in back-up roles. One such polymerase, DNA polymerase lambda (pol lambda, was shown to be important in BER of oxidative DNA damage. To further explore roles of the X-family DNA polymerases lambda and beta in BER, we prepared a mouse embryonic fibroblast cell line with deletions in the genes for both pol beta and pol lambda. Neutral red viability assays demonstrated that pol lambda and pol beta double null cells were hypersensitive to alkylating and oxidizing DNA damaging agents. In vitro BER assays revealed a modest contribution of pol lambda to single-nucleotide BER of base lesions. Additionally, using co-immunoprecipitation experiments with purified enzymes and whole cell extracts, we found that both pol lambda and pol beta interact with the upstream DNA glycosylases for repair of alkylated and oxidized DNA bases. Such interactions could be important in coordinating roles of these polymerases during BER.

  8. BER evaluations for multimode beams in underwater turbulence

    Science.gov (United States)

    Altay Arpali, Serap; Baykal, Yahya; Arpali, Çağlar

    2016-07-01

    In underwater optical communication links, bit error rate (BER) is an important performance criterion. For this purpose, the effects of oceanic turbulence on multimode laser beam incidences are studied and compared in terms of average BER (), which is related to the scintillation index. Based on the log-normal distribution, is analysed for underwater turbulence parameters, including the rate of dissipation of the mean squared temperature, the rate of dissipation of the turbulent kinetic energy, the parameter that determines the relative strength of temperature and salinity in driving index fluctuations, the Kolmogorov microscale length and other link parameters such as link length, wavelength and laser source size. It is shown that use of multimode improves the system performance of optical wireless communication systems operating in an underwater medium. For all the investigated multimode beams, decreasing link length, source size, the relative strength of temperature and salinity in driving the index fluctuations, the rate of dissipation of the mean squared temperature and Kolmogorov microscale length improve the . Moreover, lower values are obtained for the increasing wavelength of operation and the rate of dissipation of the turbulent kinetic energy in underwater turbulence.

  9. Changes in DNA repair during aging

    Science.gov (United States)

    Gorbunova, Vera; Seluanov, Andrei; Mao, Zhiyong; Hine, Christpher

    2007-01-01

    DNA is a precious molecule. It encodes vital information about cellular content and function. There are only two copies of each chromosome in the cell, and once the sequence is lost no replacement is possible. The irreplaceable nature of the DNA sets it apart from other cellular molecules, and makes it a critical target for age-related deterioration. To prevent DNA damage cells have evolved elaborate DNA repair machinery. Paradoxically, DNA repair can itself be subject to age-related changes and deterioration. In this review we will discuss the changes in efficiency of mismatch repair (MMR), base excision repair (BER), nucleotide excision repair (NER) and double-strand break (DSB) repair systems during aging, and potential changes in DSB repair pathway usage that occur with age. Mutations in DNA repair genes and premature aging phenotypes they cause have been reviewed extensively elsewhere, therefore the focus of this review is on the comparison of DNA repair mechanisms in young versus old. PMID:17913742

  10. Overexpression of DNA ligase III in mitochondria protects cells against oxidative stress and improves mitochondrial DNA base excision repair.

    Science.gov (United States)

    Akbari, Mansour; Keijzers, Guido; Maynard, Scott; Scheibye-Knudsen, Morten; Desler, Claus; Hickson, Ian D; Bohr, Vilhelm A

    2014-04-01

    Base excision repair (BER) is the most prominent DNA repair pathway in human mitochondria. BER also results in a temporary generation of AP-sites, single-strand breaks and nucleotide gaps. Thus, incomplete BER can result in the generation of DNA repair intermediates that can disrupt mitochondrial DNA replication and transcription and generate mutations. We carried out BER analysis in highly purified mitochondrial extracts from human cell lines U2OS and HeLa, and mouse brain using a circular DNA substrate containing a lesion at a specific position. We found that DNA ligation is significantly slower than the preceding mitochondrial BER steps. Overexpression of DNA ligase III in mitochondria improved the rate of overall BER, increased cell survival after menadione induced oxidative stress and reduced autophagy following the inhibition of the mitochondrial electron transport chain complex I by rotenone. Our results suggest that the amount of DNA ligase III in mitochondria may be critical for cell survival following prolonged oxidative stress, and demonstrate a functional link between mitochondrial DNA damage and repair, cell survival upon oxidative stress, and removal of dysfunctional mitochondria by autophagy.

  11. Distinct spatiotemporal patterns and PARP dependence of XRCC1 recruitment to single-strand break and base excision repair

    NARCIS (Netherlands)

    A. Campalans (Anna); R. Amouroux (Rachel); H. Menoni (Hervé); W. Vermeulen (Wim); J.P. Radicella (Pablo)

    2013-01-01

    textabstractSingle-strand break repair (SSBR) and base excision repair (BER) of modified bases and abasic sites share several players. Among them is XRCC1, an essential scaffold protein with no enzymatic activity, required for the coordination of both pathways. XRCC1 is recruited to SSBR by PARP-1,

  12. DNA Repair Gene Polymorphisms in Relation to Non-Small Cell Lung Cancer Survival

    Directory of Open Access Journals (Sweden)

    Yuliang Su

    2015-07-01

    Full Text Available Background: Single nucleotide polymorphisms (SNPs in the DNA repair genes are suspected to be related to the survival of lung cancer patients due to their possible influence on DNA repair capacity (DRC. However, the study results are inconsistent. Methods: A follow-up study of 610 non-small cell lung cancer (NSCLC patients was conducted to investigate genetic polymorphisms associated with the DNA repair genes in relation to NSCLC survival; 6 SNPs were genotyped, including XRCC1 (rs25487 G>A, hOGG1 (rs1052133 C>G, MUTYH (rs3219489 G>C, XPA (rs1800975 G>A, ERCC2 (rs1799793 G>A and XRCC3 (rs861539 C>T. Kaplan-Meier survival curve and Cox proportional hazards regression analyses were performed. SNP-SNP interaction was also examined using the survival tree analysis. Results: Advanced disease stage and older age at diagnosis were associated with poor prognosis of NSCLC. Patients with the variant ‘G' allele of hOGG1 rs1052133 had poor overall survival compared with those with the homozygous wild ‘CC' genotype, especially in female patients, adenocarcinoma histology, early stage, light smokers and without family history of cancer. For never smoking female lung cancer patients, individuals carrying homozygous variant ‘AA' genotype of XPA had shorter survival time compared to those with wild ‘G' alleles. Furthermore, females carrying homozygous variant XPA and hOGG1 genotypes simultaneously had 2.78-fold increased risk for death. Among all 6 polymorphisms, the homozygous variant ‘AA' of XPA carriers had poor prognosis compared to the carriers of wild ‘G' alleles of XPA together with other base excision repair (BER polymorphisms. Conclusions: Besides disease stage and age, the study found DNA repair gene polymorphisms were associated with lung cancer survival.

  13. BER Science Network Requirements Workshop -- July 26-27,2007

    Energy Technology Data Exchange (ETDEWEB)

    Tierney, Brian L.; Dart, Eli

    2008-02-01

    The Energy Sciences Network (ESnet) is the primary provider of network connectivity for the US Department of Energy Office of Science, the single largest supporter of basic research in the physical sciences in the United States of America. In support of the Office of Science programs, ESnet regularly updates and refreshes its understanding of the networking requirements of the instruments, facilities, scientists, and science programs that it serves. This focus has helped ESnet to be a highly successful enabler of scientific discovery for over 20 years. In July 2007, ESnet and the Biological and Environmental Research (BER) Program Office of the DOE Office of Science organized a workshop to characterize the networking requirements of the science programs funded by the BER Program Office. These included several large programs and facilities, including Atmospheric Radiation Measurement (ARM) Program and the ARM Climate Research Facility (ACRF), Bioinformatics and Life Sciences Programs, Climate Sciences Programs, the Environmental Molecular Sciences Laboratory at PNNL, the Joint Genome Institute (JGI). National Center for Atmospheric Research (NCAR) also participated in the workshop and contributed a section to this report due to the fact that a large distributed data repository for climate data will be established at NERSC, ORNL and NCAR, and this will have an effect on ESnet. Workshop participants were asked to codify their requirements in a 'case study' format, which summarizes the instruments and facilities necessary for the science and the process by which the science is done, with emphasis on the network services needed and the way in which the network is used. Participants were asked to consider three time scales in their case studies--the near term (immediately and up to 12 months in the future), the medium term (3-5 years in the future), and the long term (greater than 5 years in the future). In addition to achieving its goal of collecting and

  14. Ein Überblick über die Sprechakttheorie von Austin und Searle

    Institute of Scientific and Technical Information of China (English)

    周婧

    2016-01-01

    Die Sprechakttheorie ist ein bedeutender Teilbereich von der linguistischen Pragmatik, die sich seit den 50er und 60er Jahren des letzten Jahrhunderts entwickelte. Die berühmten Sprachwissenschaftler Austin und Searle legten den Grundstein zu Sprechakttheorie. Dieser Text liefert einen Überblick ü ber die Forschungsergebnisse von den beiden Forschern. Dadurch kann man die Entwicklung der Sprechakttheorie gut erkennen.

  15. Tendon repair

    Science.gov (United States)

    Repair of tendon ... Tendon repair can be performed using: Local anesthesia (the immediate area of the surgery is pain-free) ... a cut on the skin over the injured tendon. The damaged or torn ends of the tendon ...

  16. Early steps in the DNA base excision/single-strand interruption repair pathway in mammalian cells

    Institute of Scientific and Technical Information of China (English)

    Muralidhar L Hegde; Tapas K Hazra; Sankar Mitra

    2008-01-01

    Base excision repair (BER) is an evolutionarily conserved process for maintaining genomic integrity by eliminating several dozen damaged (oxidized or alkylated) or inappropriate bases that are generated endogenously or induced by genotoxicants, predominantly, reactive oxygen species (ROS). BER involves 4-5 steps starting with base excision by a DNA glycosylase, followed by a common pathway usually involving an AP-endonuclease (APE) to generate 3' OH terminus at the damage site, followed by repair synthesis with a DNA polymerase and nick sealing by a DNA ligase. This pathway is also responsible for repairing DNA single-strand breaks with blocked termini directly generated by ROS. Nearly all glycosylases, far fewer than their substrate lesions particularly for oxidized bases, have broad and overlapping substrate range, and could serve as back-up enzymes in vivo. In contrast, mammalian cells encode only one APE, APEl, unlike two APEs in lower organisms. In spite of overall similarity, BER with distinct subpathways in the mammals is more complex than in E.coli. The glycosylases form complexes with downstream proteins to carry out efficient repair via distinct subpathways one of which, responsible for repair of strand breaks with 3' phosphate ter-mini generated by the NEIL family glycosylases or by ROS, requires the phosphatase activity of polynucleotide kinase instead of APEl. Different complexes may utilize distinct DNA polymerases and ligases. Mammalian glycosylases have nonconserved extensions at one of the termini, dispensable for enzymatic activity but needed for interaction with other BER and non-BER proteins for complex formation and organelle targeting. The mammalian enzymes are sometimes covalently modified which may affect activity and complex formation. The focus of this review is on the early steps in mammalian BER for oxidized damage.

  17. EVALUATION OF BER FOR VARIOUS FADING CHANNEL IN DWT BASED MIMO-OFDM SYSTEM

    Directory of Open Access Journals (Sweden)

    D. Meenakshi

    2013-04-01

    Full Text Available MIMO communication is mainly use in the OFDM to improve the communication performance and capacity. DWT based MIMO-OFDM is used in this paper. Compare to the FFT based MIMO-OFDM it has lot advantages. There is no need for cyclic prefix, flexibility and optimal resolution. Ripple(Wavelet concept has developed as a fresh scientific implement with the aim of preserve be functional in several applications such as processing of image, biomedical manufacturing, radar, physics, organize systems also message systems. The essential region of purpose of ripples in communication system: numerous accesses. A fresh modulation/multiplexing scheme consuming ripple transform remained planned for (3rd production organization project 3GPP systems. This fresh modulation system implemented in (orthogonal frequency division multiplexing OFDM scheme in addition to conventional based(FFT transform blocks is replaced by wavelet transform blocks. There are many multiplicity of ripple transforms are offered, out of which four were chosen. They are Haar, Daubechies, Bi-orthogonal and reverse Bi-orthogonal transforms. Haar wavelet is best one of among all types of wavelet. The performance of DWT based MIMO-OFDM is calculated by bit error rate (BER in various channel that is AWGN channel and Rayleigh channel. Using MATLAB-Simulation which channel is best for the DWT based MIMO-OFDM.

  18. Conspectus revisited: Bestandesentwicklung über Conspectusvergabe auf Exemplarniveau

    Directory of Open Access Journals (Sweden)

    Wolfram Lutterer

    2014-12-01

    Full Text Available Im Allgemeinen dient das in den USA entwickelte Conspectusverfahren dazu, die Sammelintensität von Bibliotheken hinsichtlich des jeweiligen Spezialisierungsgrads einzelner Sammelgebiete zu beschreiben. Häufig geschieht dies auch in Zusammenhang mit der Entwicklung von Approval Plans. An der Zentral- und Hochschulbibliothek Luzern wurde hierbei ein etwas anderer Weg begangen. Im Rahmen eines über zwölf Jahre angelegten Projektes wurde für jedes einzelne erworbene Medium eine Klassifikation im Rahmen des Conspectus vorgenommen. Ergebnisse dieser Studie werden vorgestellt. Damit ergibt sich ein differenzierterer Blick auf das Conspectusverfahren sowie eine Klärung zur Relevanz und Leistungskraft von Fachprofilen. A conspectus is used to describe the collection strength of a library in terms of the respective degree of specialization of its collections. This often happens in combination with the development of approval plans. At the Central and University Library Lucerne in Switzerland a somewhat different approach was used. In a project lasting twelve years each individual item acquired was classified in accordance with the conspectus. The results of this study will be presented. A much more differentiated view of the conspectus is one of the results, as well as a clarification of the relevance and performance of collection profiles.

  19. Analysis Of Impact Of Various Parameters On BER Performance For IEEE 802.11b

    Directory of Open Access Journals (Sweden)

    Nilesh B. Kalani

    2015-08-01

    Full Text Available Abstract This paper discusses about IEEE 802.11b simulation model implemented using LabVIEW software and its analyses for impact on bit error rate BER for different parameters as channel type channel number data transmission rate and packet size. Audio file is being transmitted processed and analyzed using the model for various parameters. This paper gives analysis of BER verses ESN0 for various parameter like data rate packet size and communication channel for the IEEE 802.11b simulation model generated using LabVIEW. It is proved that BER can be optimized by tweaking different parameters of wireless communication system.

  20. Bladder exstrophy repair

    Science.gov (United States)

    Bladder birth defect repair; Everted bladder repair; Exposed bladder repair; Repair of bladder exstrophy ... Bladder exstrophy repair involves two surgeries. The first surgery is to repair the bladder and the second one is to attach ...

  1. The role of DNA base excision repair in brain homeostasis and disease

    DEFF Research Database (Denmark)

    Akbari, Mansour; Morevati, Marya; Croteau, Deborah;

    2015-01-01

    Chemical modification and spontaneous loss of nucleotide bases from DNA are estimated to occur at the rate of thousands per human cell per day. DNA base excision repair (BER) is a critical mechanism for repairing such lesions in nuclear and mitochondrial DNA. Defective expression or function...... of proteins required for BER or proteins that regulate BER have been consistently associated with neurological dysfunction and disease in humans. Recent studies suggest that DNA lesions in the nuclear and mitochondrial compartments and the cellular response to those lesions have a profound effect on cellular...... energy homeostasis, mitochondrial function and cellular bioenergetics, with especially strong influence on neurological function. Further studies in this area could lead to novel approaches to prevent and treat human neurodegenerative disease....

  2. DNA repair mechanisms in eukaryotes: Special focus in Entamoeba histolytica and related protozoan parasites.

    Science.gov (United States)

    López-Camarillo, César; Lopez-Casamichana, Mavil; Weber, Christian; Guillen, Nancy; Orozco, Esther; Marchat, Laurence A

    2009-12-01

    Eukaryotic cell viability highly relies on genome stability and DNA integrity maintenance. The cellular response to DNA damage mainly consists of six biological conserved pathways known as homologous recombination repair (HRR), non-homologous end-joining (NHEJ), base excision repair (BER), mismatch repair (MMR), nucleotide excision repair (NER), and methyltransferase repair that operate in a concerted way to minimize genetic information loss due to a DNA lesion. Particularly, protozoan parasites survival depends on DNA repair mechanisms that constantly supervise chromosomes to correct damaged nucleotides generated by cytotoxic agents, host immune pressure or cellular processes. Here we reviewed the current knowledge about DNA repair mechanisms in the most relevant human protozoan pathogens. Additionally, we described the recent advances to understand DNA repair mechanisms in Entamoeba histolytica with special emphasis in the use of genomic approaches based on bioinformatic analysis of parasite genome sequence and microarrays technology.

  3. Biomolecular Simulation of Base Excision Repair and Protein Signaling

    Energy Technology Data Exchange (ETDEWEB)

    Straatsma, TP; McCammon, J A; Miller, John H; Smith, Paul E; Vorpagel, Erich R; Wong, Chung F; Zacharias, Martin W

    2006-03-03

    The goal of the Biomolecular Simulation of Base Excision Repair and Protein Signaling project is to enhance our understanding of the mechanism of human polymerase-β, one of the key enzymes in base excision repair (BER) and the cell-signaling enzymes cyclic-AMP-dependent protein kinase. This work used molecular modeling and simulation studies to specifically focus on the • dynamics of DNA and damaged DNA • dynamics and energetics of base flipping in DNA • mechanism and fidelity of nucleotide insertion by BER enzyme human polymerase-β • mechanism and inhibitor design for cyclic-AMP-dependent protein kinase. Molecular dynamics simulations and electronic structure calculations have been performed using the computer resources at the Molecular Science Computing Facility at the Environmental Molecular Sciences Laboratory.

  4. Impact of Mutual Coupling and Polarization of Antennas on BER Performances of Spatial Multiplexing MIMO Systems

    Directory of Open Access Journals (Sweden)

    Jianfeng Zheng

    2012-01-01

    Full Text Available This paper is aimed at studying the impacts of mutual coupling, matching networks, and polarization of antennas on performances of Multiple-Input Multiple-Output (MIMO systems employing Spatial Multiplexing (SM. In particular, the uncoded average Bit Error Rate (BER of MIMO systems is investigated. An accurate signal analysis framework based on circuit network parameters is presented to describe the transmit/receive characteristics of the matched/unmatched antenna array. The studied arrays consist of matched/unmatched compact copolarization and polarization diversity antenna array. Monte-Carlo numerical simulations are used to study the BER performances of the SM MIMO systems using maximum-likelihood and/or zero-forcing detection schemes. The simulation results demonstrate that the use of matching networks can improve the BER performance of SM MIMO systems significantly, and the BER performance deterioration due to antenna orientation randomness can be compensated by use of polarization diversity antenna arrays.

  5. Bulgarian Emergency Response System (BERS) in case of nuclear accident with exposure doses estimation

    Energy Technology Data Exchange (ETDEWEB)

    Syrakov, D.; Prodanova, M.; Slavov, K.; Veleva, B.

    2015-07-01

    A PC-oriented Emergency Response System in case of nuclear accident (BERS) is developed and works operationally in the National Institute of Meteorology and Hydrology (NIMH). The creation and development of BERS was highly stimulated by the ETEX (European Tracer Experiment) project. BERS comprises two main parts - the operational and the accidental ones. The operational part, run automatically every 12 hours, prepares the input meteorological file used by both trajectory and dispersion models, runs the trajectory models, visualizes the results and uploads the maps of trajectories to a dedicated web-site. The accidental part is activated manually when a real radioactive releases occur or during emergency exercises. Its core is the Bulgarian dispersion models EMAP. Outputs are concentration, accumulated deposition and selected doses fields. In the paper, the BERS overall structure is described and examples of its products are presented. Key words: nuclear accident, emergency response, early warning system, air dispersion models, radioactive exposure dose. (Author)

  6. Bulgarian Emergency Response System (BERS) in case of nuclear accident with exposure doses’estimation

    Energy Technology Data Exchange (ETDEWEB)

    Syrakov, M.; Prodanova, M.; Slavov, K.; Veleva, B.

    2015-07-01

    A PC-oriented Emergency Response System in case of nuclear accident (BERS) is developed and works operationally in the National Institute of Meteorology and Hydrology (NIMH). The creation and development of BERS was highly stimulated by the ETEX (European Tracer Experiment) project. BERS comprises two main parts - the operational and the accidental ones. The operational part, run automatically every 12 hours, prepares the input meteorological file used by both trajectory and dispersion models, runs the trajectory models, visualizes the results and uploads the maps of trajectories to a dedicated web-site. The accidental part is activated manually when a real radioactive releases occur or during emergency exercises. Its core is the Bulgarian dispersion models EMAP. Outputs are concentration, accumulated deposition and selected doses fields. In the paper, the BERS overall structure is described and examples of its products are presented. (Author)

  7. BER Performance of Frequency Domain Differential Demodulation OFDM in Flat Fading Channel

    Institute of Scientific and Technical Information of China (English)

    SONG Lijun; TANG Youxi; LI Shaoqian; HUANG Shunji

    2003-01-01

    A closed form expression for the bit error rate (BER) performance of frequency domain differential demodulation(FDDD) for orthogonal frequency division multiplexing system in flat fading channel is derived. The performance is evaluated by computer simulation and compared with the time domain differential demodulation(TDDD). The results indicate that the performance of FDDD is better than that of TDDD, and the lower band of BER in the former is lower than that of the latter.

  8. Fragile DNA Repair Mechanism Reduces Ageing in Multicellular Model

    DEFF Research Database (Denmark)

    Bendtsen, Kristian Moss; Juul, Jeppe Søgaard; Trusina, Ala

    2012-01-01

    DNA damages, as well as mutations, increase with age. It is believed that these result from increased genotoxic stress and decreased capacity for DNA repair. The two causes are not independent, DNA damage can, for example, through mutations, compromise the capacity for DNA repair, which in turn...... to DNA damage can undergo full repair, go apoptotic, or accumulate mutations thus reducing DNA repair capacity. Our model predicts that at the tissue level repair rate does not continuously decline with age, but instead has a characteristic extended period of high and non-declining DNA repair capacity...... of compromised cells, thus freeing the space for healthy peers. This finding might be a first step toward understanding why a mutation in single DNA repair protein (e.g. Wrn or Blm) is not buffered by other repair proteins and therefore, leads to severe ageing disorders...

  9. Maternal folate depletion and high-fat feeding from weaning affects DNA methylation and DNA repair in brain of adult offspring.

    Science.gov (United States)

    Langie, Sabine A S; Achterfeldt, Sebastian; Gorniak, Joanna P; Halley-Hogg, Kirstin J A; Oxley, David; van Schooten, Frederik J; Godschalk, Roger W L; McKay, Jill A; Mathers, John C

    2013-08-01

    The mechanisms through which environmental and dietary factors modulate DNA repair are still unclear but may include dysregulation of gene expression due to altered epigenetic markings. In a mouse model, we investigated the effect of maternal folate depletion during pregnancy and lactation, and high-fat feeding from weaning, on base excision repair (BER) and DNA methylation and expression of selected BER-related genes in the brain of adult offspring. While folate depletion did not affect BER activity of the mothers, BER increased in the offspring at weaning (P=0.052). In the long term, as observed in 6-mo-old offspring, the double insult, i.e., maternal low-folate supply and high-fat feeding from weaning, decreased BER activity significantly in the cortex, cerebellum, hippocampus, and subcortical regions (P≤0.017). This fall in BER activity was associated with small changes in methylation or expression of BER-related genes. Maternal folate depletion led to slightly increased oxidative DNA damage levels in subcortical regions of adult offspring, which may increase sensitivity to oxidative stress and predispose to neurological disorders. In summary, our data suggest that low-folate supply during early life may leave an epigenetic mark that can predispose the offspring to further dietary insults, causing adverse effects during adult life.

  10. Das Volkslied in Deutschland, Frankreich, Belgien und Holland. Untersuchungen über die Auffassung des Begriffes; Über die traditionellen Zeilen, die Zahlen-, Blumen- und Farbensymbolik

    NARCIS (Netherlands)

    Brouwer, Cornelis

    1930-01-01

    Wenn man die gewaltige Menge Publikationen über das Volkslied, die im Laufe des 19. und 20. Jahrhunderts in Deutschland, Frankreich, Belgien und Holland erschienen sind, vergleicht, springen zwei Punkte sofort ins Auge: 1. der Unterschied zwischen den verschiedenen Auffassungen vom Begriff Volkslied

  11. Beobachtungen über die Fortpflanzung und Verdauung des Unaus (Zweizehen-Faultier = Choloepus didactylus Linné) nebst einigen Bemerkungen über sein Verhalten

    NARCIS (Netherlands)

    Schneider, Karl Max

    1939-01-01

    Die folgenden Beobachtungen habe ich im Leipziger Zoologischen Garten gemacht. Im Mai 1912 kaufte dieser von der Königlichen Zoologischen Gesellschaft „Natura Artis Magistra” zu Amsterdam eine Faultier-Familie (Choloepus didactylus Linné), wovon das Männchen — sich am längsten haltend — über 8 Jahre

  12. Über die Bedeutung von Magnesium bei der Tumorgenese

    Directory of Open Access Journals (Sweden)

    Golf SW

    2001-01-01

    Full Text Available Magnesium (Mg und die Tumorgenese sind in funktioneller wie in struktureller Hinsicht vielseitig miteinander verknüpft. Die Tumorzelle ist befähigt, Mg zu Lasten der Mg-Pools des Organismus in überhöhter Konzentration zu speichern, auch wenn für den Organismus eine negative Mg-Bilanz vorliegt. Durch diese Veränderung der Mg-Verteilung wird die Zelle in die Lage versetzt, den erhöhten Enegiebedarf bei Zellwachstum, z.B. durch eine induzierte Proteinbiosynthese und RNA-/DNA-Biosynthese, sowie gesteigerte Transportvorgänge zu decken. Andererseits verlaufen zahlreiche Vorgänge bei der Protein-, RNA-/DNA-Synthese, bei der Signalentstehung und -Propagation, bei Teilen der Mitose (Umbau der nukleären Struktur, Meta- und Anaphase sowie bei der Metastase in einem akzelerierten Modus kalziumabhängig, was diese Reaktionen stark Mg-abhängig gestaltet. Ca verbleibt nur wenige Sekunden funktional und wird durch Influx in das endoplasmatische Retikulum (ER aus dem Zytosol eliminiert, wodurch die Prozesse gebremst oder sogar unterbrochen werden. Für den Rücktransport von Ca in die intrazellulären Speicher wird Mg benötigt; somit kann Mg auch als Inhibitor dieser Vorgänge betrachtet werden. Auch die biologische Zytostase z. B. durch alpha-Tumornekrosefaktor (alphaTNF verläuft Mg-abhängig, da eine gesteigerte Resistenz der Tumorzelle gegenüber alphaTNF bei Mg-Mangel besteht. In struktureller Hinsicht kommen Mg bedeutende Wirkungen bei der Tumorgenese zu. Klassisch sind die schützenden Effekte von Mg bei der durch kanzerogene Metalle, z.B. Arsen, Beryllium, Chrom, Blei, Quecksilber und Nickel, ausgelösten Tumorgenese. Eine Schutzwirkung tritt vor allem bei einem Ungleichgewicht zwischen dem kanzerogenen Metall und dem Mg-Status des Organismus ein. In analoger Weise sind auch die Stabilität von DNA und RNA sowie Reparaturmechanismen von DNA-Schäden nur in ausreichender Gegenwart von funktionellem Mg optimiert. Hinsichtlich der Immunkompetenz

  13. The role of the PHP domain associated with DNA polymerase X from Thermus thermophilus HB8 in base excision repair.

    Science.gov (United States)

    Nakane, Shuhei; Nakagawa, Noriko; Kuramitsu, Seiki; Masui, Ryoji

    2012-11-01

    Base excision repair (BER) is one of the most commonly used DNA repair pathways involved in genome stability. X-family DNA polymerases (PolXs) play critical roles in BER, especially in filling single-nucleotide gaps. In addition to a polymerase core domain, bacterial PolXs have a polymerase and histidinol phosphatase (PHP) domain with phosphoesterase activity which is also required for BER. However, the role of the PHP domain of PolX in bacterial BER remains unresolved. We found that the PHP domain of Thermus thermophilus HB8 PolX (ttPolX) functions as two types of phosphoesterase in BER, including a 3'-phosphatase and an apurinic/apyrimidinic (AP) endonuclease. Experiments using T. thermophilus HB8 cell lysates revealed that the majority of the 3'-phosphatase and AP endonuclease activities are attributable to the another phosphoesterase in T. thermophilus HB8, endonuclease IV (ttEndoIV). However, ttPolX possesses significant 3'-phosphatase activity in ΔttendoIV cell lysate, indicating possible complementation. Our experiments also reveal that there are only two enzymes that display the 3'-phosphatase activity in the T. thermophilus HB8 cell, ttPolX and ttEndoIV. Furthermore, phenotypic analysis of ΔttpolX, ΔttendoIV, and ΔttpolX/ΔttendoIV using hydrogen peroxide and sodium nitrite supports the hypothesis that ttPolX functions as a backup for ttEndoIV in BER.

  14. Hypospadias repair

    Science.gov (United States)

    ... the problem. If the repair is not done, problems may occur later on such as: Difficulty controlling and directing urine stream A curve in the penis during erection Decreased fertility Embarrassment about appearance of penis Surgery ...

  15. Abnormal Base Excision Repair at Trinucleotide Repeats Associated with Diseases: A Tissue-Selective Mechanism

    Directory of Open Access Journals (Sweden)

    Agathi-Vasiliki Goula

    2013-07-01

    Full Text Available More than fifteen genetic diseases, including Huntington’s disease, myotonic dystrophy 1, fragile X syndrome and Friedreich ataxia, are caused by the aberrant expansion of a trinucleotide repeat. The mutation is unstable and further expands in specific cells or tissues with time, which can accelerate disease progression. DNA damage and base excision repair (BER are involved in repeat instability and might contribute to the tissue selectivity of the process. In this review, we will discuss the mechanisms of trinucleotide repeat instability, focusing more specifically on the role of BER.

  16. A potential impact of DNA repair on ageing and lifespan in the ageing model organism Podospora anserina

    DEFF Research Database (Denmark)

    Soerensen, Mette; Gredilla, Ricardo; Müller-Ohldach, Mathis

    2009-01-01

    . anserina genome revealed high homology. We report for the first time the presence of BER activities in P. anserina mitochondrial extracts. DNA glycosylase activities decrease with age, suggesting that the increased mtDNA instability with age may be caused by decreased ability to repair mtDNA damage......The free radical theory of ageing states that ROS play a key role in age-related decrease in mitochondrial function via the damage of mitochondrial DNA (mtDNA), proteins and lipids. In the sexually reproducing ascomycete Podospora anserina ageing is, as in other eukaryotes, associated with mtDNA...... instability and mitochondrial dysfunction. Part of the mtDNA instabilities may arise due to accumulation of ROS induced mtDNA lesions, which, as previously suggested for mammals, may be caused by an age-related decrease in base excision repair (BER). Alignments of known BER protein sequences with the P...

  17. Do berço ao berçário: a instituição como morada e lugar de contato

    Directory of Open Access Journals (Sweden)

    Marta Nörnberg

    2013-12-01

    Full Text Available Este ensaio aborda o sentido da instituição infantil a partir de uma perspectiva ético-estético-afetiva do viver humano. A abordagem ampara-se em perspectivas filosóficas sobre a existência humana. Os argumentos apresentam o berçário como morada, lugar do viver juntos, instituição que se faz em coletividade, nela e com ela, decorrente do encontro de bebês e adultos. Ao constituir-se como morada dos bebês, o berçário ritualiza e reatualiza a prática pedagógica como lugar de relação entre bebês e adultos, requerendo uma pedagogia do contato.

  18. El latín y su influencia en el beréber (The Latin and its influence in the Berber

    Directory of Open Access Journals (Sweden)

    Karima Bouallal

    2013-06-01

    Full Text Available En el presente artículo se realizará un estudio sobre la influencia del latín en el beréber. Para ello expondremos las diferentes etapas de la influencia. En definitiva, el objetivo que se persigue con este artículo es ofrecer algunos términos prestados del latín debido al contacto de estas lenguas. (The present article carries out a study on the influence of Latin in Berber. For this purpose, we expose the different stages of this influence. In short, the objective pursued with this article is to offer some borrowed terms from Latin because of the contact between these two languages.

  19. The indirect effect of radiation reduces the repair fidelity of NHEJ as verified in repair deficient CHO cell lines exposed to different radiation qualities and potassium bromate

    Energy Technology Data Exchange (ETDEWEB)

    Bajinskis, Ainars, E-mail: ainars.bajinskis@gmt.su.se [Centre for Radiation Protection Research, Department of Genetics, Microbiology and Toxicology, Stockholm University, S-10691 Stockholm (Sweden); Olsson, Gunilla; Harms-Ringdahl, Mats [Centre for Radiation Protection Research, Department of Genetics, Microbiology and Toxicology, Stockholm University, S-10691 Stockholm (Sweden)

    2012-03-01

    The complexity of DNA lesions induced by ionizing radiation is mainly dependent on radiation quality, where the indirect action of radiation may contribute to different extent depending on the type of radiation under study. The effect of indirect action of radiation can be investigated by using agents that induce oxidative DNA damage or by applying free radical scavengers. The aim of this study was to investigate the role of the indirect effect of radiation for the repair fidelity of non-homologous end-joining (NHEJ), homologous recombination repair (HRR) and base excision repair (BER) when DNA damage of different complexity was induced by gamma radiation, alpha particles or from base damages (8-oxo-dG) induced by potassium bromate (KBrO{sub 3}). CHO cells lines deficient in XRCC3 (HRR) irs1SF, XRCC7 (NHEJ) V3-3 and XRCC1 (BER) EM9 were irradiated in the absence or presence of the free radical scavenger dimethyl sulfoxide (DMSO). The endpoints investigated included rate of cell proliferation by the DRAG assay, clonogenic cell survival and the level of primary DNA damage by the comet assay. The results revealed that the indirect effect of low-LET radiation significantly reduced the repair fidelity of both NHEJ and HRR pathways. For high-LET radiation the indirect effect of radiation also significantly reduced the repair fidelity for the repair deficient cell lines. The results suggest further that the repair fidelity of the error prone NHEJ repair pathway is more impaired by the indirect effect of high-LET radiation relative to the other repair pathways studied. The response to bromate observed for the two DSB repair deficient cell lines strongly support earlier studies that bromate induces complex DNA damages. The significantly reduced repair fidelity of irs1SF and V3-3 suggests that NHEJ as well as HRR are needed for the repair, and that complex DSBs are formed after bromate exposure.

  20. Purification, crystallization and initial crystallographic characterization of brazil-nut allergen Ber e 2

    Energy Technology Data Exchange (ETDEWEB)

    Guo, Feng; Jin, Tengchuan; Howard, Andrew; Zhang, Yu-Zhu, E-mail: zhangy@iit.edu [Department of Biology, Illinois Institute of Technology, Chicago, IL 60616 (United States)

    2007-11-01

    The crystallization of the brazil nut allergen Ber e 2 is reported. Peanut and tree-nut allergies have attracted considerable attention because of their frequency and their lifelong persistence. Brazil-nut (Bertholletia excelsa) allergies have been well documented and the 11S legumin-like seed storage protein Ber e 2 (excelsin) is one of the two known brazil-nut allergens. In this study, Ber e 2 was extracted from brazil-nut kernels and purified to high purity by crystalline precipitation and gel-filtration chromatography. Well diffracting single crystals were obtained using the hanging-drop vapour-diffusion method. A molecular-replacement structural solution has been obtained. Refinement of the structure is currently under way.

  1. THE THEORETICAL BER PERFORMANCE ANALYSIS OF A COOPERATIVE DIVERSITY SCHEME IN FREQUENCY SELECTIVE FADING CHANNEL

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    A novel cooperative diversity scheme based on Distributed Space-Time Block Coding and Multi-Carrier Code Division Multiple Access (DSTBC-MC-CDMA) is proposed which works well in frequency selective fading channels with multiple single-antenna users. And an analytical error model is established to describe the symbol decoding errors between interusers, based on which a close form expression for theoretical Bit Error Rate (BER) performance of the scheme is derived to analyze the influence of the interuser decoding errors on the BER performance of the scheme. Then simulation is complimented to verify the analytic result above, which also shows that the BER performance of DSTBC-MC-CDMA outgoes that of non-cooperative MC-CDMA with considerable gains. Furthermore, the simulations coincide with the theoretical results well.

  2. Fully coupled Lattice Boltzmann simulation of fiber reinforced self compacting concrete flow

    DEFF Research Database (Denmark)

    Svec, Oldrich; Skocek, Jan; Stang, Henrik;

    To correctly predict the casting process of a fiber reinforced self compacting concrete on a structural level is a challenging task since the distribution and orientation of fibers influence the global flow pattern and vice versa. In this contribution, a modeling approach capable to represent...... accurately the most important phenomena is introduced. A conventional Lattice Boltzmann method has been chosen as a fluid dynamics solver of the non-Newtonian fluid. A Mass Tracking Algorithm has been implemented to correctly represent a free surface and a modified Immersed Boundary Method (IBM) with direct...... the final dispersion and orientation of fibers during a real casting process....

  3. BER analysis of IM/DD FSO system with APD receiver over gamma-gamma turbulence

    Directory of Open Access Journals (Sweden)

    Petković Milica I.

    2014-01-01

    Full Text Available In this paper, the bit-error rate (BER performance of intensity modulated with direct detection (IM/DD free space optical (FSO system using the on-off keying (OOK and avalanche photodiode (APD receiver is analyzed. The intensity fluctuations of the received optical signal are modeled by gamma gamma distribution, while both zero and nonzero inner scale models are observed. The total receiver noise includes APD shot noise and thermal noise. The BER expression is theoretically derived and numerical results are presented. The results illustrate the BER dependence on the turbulence strength, propagation path length, APD gain and noise temperature. [Projekat Ministarstva nauke Republike Srbije, br. TR-32028 i br. III-44006

  4. Bers型空间和复合算子%Bers-type Spaces and Composition Operators

    Institute of Scientific and Technical Information of China (English)

    姜立建; 李叶舟

    2002-01-01

    For α∈ (0, ∞), let H∞α (or H∞α,0) denote the collection of all functionsf which are analytic on the unit disc D and satisfy |f(z)|(1 -|z|2)α = O(1) (or|f(z)|(1 -|z|2)α = o(1) as |z| → 1). H∞α(or H∞α,0) is called a Bers-type space(or a little Bers-type space).In this paper, we give some basic properties of H∞α.Cψ,the composition operator associated with a symbol function ψ which is an analyticself map of D, is difined by Cψf = f o ψ. We characterize the boundedness andcompactness of Cψ which sends one Bers-type space to another function space.

  5. BER of asymmetrical optical beams in oceanic and marine atmospheric media

    Science.gov (United States)

    Baykal, Yahya

    2017-06-01

    The average bit-error-rate (BER) performances of asymmetrical optical Gaussian beams propagating in oceanic and marine atmospheric turbulence are examined. Both type of media are assumed to exhibit weak turbulence. The effect of asymmetry factor on the BER performance are investigated in conjunction with the oceanic turbulence parameters of the ratio of temperature to salinity contributions to the refractive index spectrum, the rate of dissipation of mean-squared temperature and the rate of dissipation of kinetic energy per unit mass of fluid, and with the marine atmospheric link parameters of the link length and the structure constant. Also, the variations of the BER against the source size of various asymmetrical beams are scrutinized in both oceanic and marine atmospheric media.

  6. Defective DNA repair and increased chromatin binding of DNA repair factors in Down syndrome fibroblasts.

    Science.gov (United States)

    Necchi, Daniela; Pinto, Antonella; Tillhon, Micol; Dutto, Ilaria; Serafini, Melania Maria; Lanni, Cristina; Govoni, Stefano; Racchi, Marco; Prosperi, Ennio

    2015-10-01

    Down syndrome (DS) is characterized by genetic instability, neurodegeneration, and premature aging. However, the molecular mechanisms leading to this phenotype are not yet well understood. Here, we report that DS fibroblasts from both fetal and adult donors show the presence of oxidative DNA base damage, such as dihydro-8-oxoguanine (8-oxodG), and activation of a DNA damage response (DDR), already during unperturbed growth conditions. DDR with checkpoint activation was indicated by histone H2AX and Chk2 protein phosphorylation, and by increased p53 protein levels. In addition, both fetal and adult DS fibroblasts were more sensitive to oxidative DNA damage induced by potassium bromate, and were defective in the removal of 8-oxodG, as compared with age-matched cells from control healthy donors. The analysis of core proteins participating in base excision repair (BER), such as XRCC1 and DNA polymerase β, showed that higher amounts of these factors were bound to chromatin in DS than in control cells, even in the absence of DNA damage. These findings occurred in concomitance with increased levels of phosphorylated XRCC1 detected in DS cells. These results indicate that DS cells exhibit a BER deficiency, which is associated with prolonged chromatin association of core BER factors.

  7. Nucleotide sequence, DNA damage location and protein stoichiometry influence base excision repair outcome at CAG/CTG repeats

    Science.gov (United States)

    Goula, Agathi-Vasiliki; Pearson, Christopher E.; Della Maria, Julie; Trottier, Yvon; Tomkinson, Alan E.; Wilson, David M.; Merienne, Karine

    2012-01-01

    Expansion of CAG/CTG repeats is the underlying cause of >fourteen genetic disorders, including Huntington’s disease (HD) and myotonic dystrophy. The mutational process is ongoing, with increases in repeat size enhancing the toxicity of the expansion in specific tissues. In many repeat diseases the repeats exhibit high instability in the striatum, whereas instability is minimal in the cerebellum. We provide molecular insights as to how base excision repair (BER) protein stoichiometry may contribute to the tissue-selective instability of CAG/CTG repeats by using specific repair assays. Oligonucleotide substrates with an abasic site were mixed with either reconstituted BER protein stoichiometries mimicking the levels present in HD mouse striatum or cerebellum, or with protein extracts prepared from HD mouse striatum or cerebellum. In both cases, repair efficiency at CAG/CTG repeats and at control DNA sequences was markedly reduced under the striatal conditions, likely due to the lower level of APE1, FEN1 and LIG1. Damage located towards the 5’ end of the repeat tract was poorly repaired accumulating incompletely processed intermediates as compared to an AP lesion in the centre or at the 3’ end of the repeats or within a control sequences. Moreover, repair of lesions at the 5’ end of CAG or CTG repeats involved multinucleotide synthesis, particularly under the cerebellar stoichiometry, suggesting that long-patch BER processes lesions at sequences susceptible to hairpin formation. Our results show that BER stoichiometry, nucleotide sequence and DNA damage position modulate repair outcome, and suggest that a suboptimal LP-BER activity promotes CAG/CTG repeat instability. PMID:22497302

  8. Inter-individual variation in nucleotide excision repair pathway is modulated by non-synonymous polymorphisms in ERCC4 and MBD4 genes

    Energy Technology Data Exchange (ETDEWEB)

    Allione, Alessandra, E-mail: alessandra.allione@hugef-torino.org [Human Genetics Foundation (HuGeF), Via Nizza 52, 10126 Turin (Italy); Guarrera, Simonetta; Russo, Alessia [Human Genetics Foundation (HuGeF), Via Nizza 52, 10126 Turin (Italy); Ricceri, Fulvio [Human Genetics Foundation (HuGeF), Via Nizza 52, 10126 Turin (Italy); Department of Medical Sciences, University of Turin, Via Santena 19, 10126 Turin (Italy); Purohit, Rituraj [Human Genetics Foundation (HuGeF), Via Nizza 52, 10126 Turin (Italy); Bioinformatics Division, School of Bio Sciences and Technology, Vellore Institute of Technology University, Vellore 632014, Tamil Nadu (India); Pagnani, Andrea; Rosa, Fabio; Polidoro, Silvia; Voglino, Floriana [Human Genetics Foundation (HuGeF), Via Nizza 52, 10126 Turin (Italy); Matullo, Giuseppe [Human Genetics Foundation (HuGeF), Via Nizza 52, 10126 Turin (Italy); Department of Medical Sciences, University of Turin, Via Santena 19, 10126 Turin (Italy)

    2013-11-15

    Highlights: • We reported a large inter-individual variability of NER capacity. • ERCC4 rs1800124 and MBD4 rs10342 nsSNP variants were associated with DNA repair capacity. • DNA–protein interaction analyses showed alteration of binding for ERCC4 and MBD4 variants. • A new possible cross-talk between NER and BER pathways has been reported. - Abstract: Inter-individual differences in DNA repair capacity (DRC) may lead to genome instability and, consequently, modulate individual cancer risk. Among the different DNA repair pathways, nucleotide excision repair (NER) is one of the most versatile, as it can eliminate a wide range of helix-distorting DNA lesions caused by ultraviolet light irradiation and chemical mutagens. We performed a genotype–phenotype correlation study in 122 healthy subjects in order to assess if any associations exist between phenotypic profiles of NER and DNA repair gene single nucleotide polymorphisms (SNPs). Individuals were genotyped for 768 SNPs with a custom Illumina Golden Gate Assay, and peripheral blood mononuclear cells (PBMCs) of the same subjects were tested for a NER comet assay to measure DRC after challenging cells by benzo(a)pyrene diolepoxide (BPDE). We observed a large inter-individual variability of NER capacity, with women showing a statistically significant lower DRC (mean ± SD: 6.68 ± 4.76; p = 0.004) than men (mean ± SD: 8.89 ± 5.20). Moreover, DRC was significantly lower in individuals carrying a variant allele for the ERCC4 rs1800124 non-synonymous SNP (nsSNP) (p = 0.006) and significantly higher in subjects with the variant allele of MBD4 rs2005618 SNP (p = 0.008), in linkage disequilibrium (r{sup 2} = 0.908) with rs10342 nsSNP. Traditional in silico docking approaches on protein–DNA and protein–protein interaction showed that Gly875 variant in ERCC4 (rs1800124) decreases the DNA–protein interaction and that Ser273 and Thr273 variants in MBD4 (rs10342) indicate complete loss of protein

  9. Reduced repair capacity of a DNA clustered damage site comprised of 8-oxo-7,8-dihydro-2′-deoxyguanosine and 2-deoxyribonolactone results in an increased mutagenic potential of these lesions

    Energy Technology Data Exchange (ETDEWEB)

    Cunniffe, Siobhan [CRUK-MRC Gray Institute for Radiation Oncology and Biology, Department of Oncology, University of Oxford, Old Road Campus Research Building, Roosevelt Drive, Oxford OX3 7DQ (United Kingdom); O’Neill, Peter, E-mail: peter.oneill@oncology.ox.ac.uk [CRUK-MRC Gray Institute for Radiation Oncology and Biology, Department of Oncology, University of Oxford, Old Road Campus Research Building, Roosevelt Drive, Oxford OX3 7DQ (United Kingdom); Greenberg, Marc M. [Johns Hopkins University, Department of Chemistry, 3400 N. Charles St. , Baltimore, MD 21218 (United States); Lomax, Martine E. [CRUK-MRC Gray Institute for Radiation Oncology and Biology, Department of Oncology, University of Oxford, Old Road Campus Research Building, Roosevelt Drive, Oxford OX3 7DQ (United Kingdom)

    2014-04-15

    Highlights: • A dL lesion is not repaired as effectively as an AP site. • The repair of a cluster with dL and 8-oxodGuo lesions is compromised. • Delayed repair of the cluster leads to an increase in mutation frequency. - Abstract: A signature of ionizing radiation is the induction of DNA clustered damaged sites. Non-double strand break (DSB) clustered damage has been shown to compromise the base excision repair pathway, extending the lifetimes of the lesions within the cluster, compared to isolated lesions. This increases the likelihood the lesions persist to replication and thus increasing the mutagenic potential of the lesions within the cluster. Lesions formed by ionizing radiation include 8-oxo-7,8-dihydro-2′-deoxyguanosine (8-oxodGuo) and 2-deoxyribonolactone (dL). dL poses an additional challenge to the cell as it is not repaired by the short-patch base excision repair pathway. Here we show recalcitrant dL repair is reflected in mutations observed when DNA containing it and a proximal 8-oxodGuo is replicated in Escherichia coli. 8-oxodGuo in close proximity to dL on the opposing DNA strand results in an enhanced frequency of mutation of the lesions within the cluster and a 20 base sequence flanking the clustered damage site in an E. coli based plasmid assay. In vitro repair of a dL lesion is reduced when compared to the repair of an abasic (AP) site and a tetrahydrofuran (THF), and this is due mainly to a reduction in the activity of polymerase β, leading to retarded FEN1 and ligase 1 activities. This study has given insights in to the biological effects of clusters containing dL.

  10. Horacio Castellanos Moya und die Kunst des ÜberLebens

    OpenAIRE

    2007-01-01

    Diese Homepage präsentiert die Ergebnisse eines Seminars über den mittelamerikanischen Schriftsteller Horacio Castellanos Moya, das im Sommersemester 2006 an der Universität Potsdam stattfand. Sie richtetet sich sowohl an interessierte Leser seiner Bücher, als auch an die akademische Öffentlichkeit, die sich dem Werk Castellanos Moyas bisher in z.T. nicht leicht zugänglichen Einzelanalysen gewidmet hat. Über verschiedene Einstiegsmöglichkeiten (Zitate – Bibliographie - Interviews) können die ...

  11. The upgraded cold neutron three axis spectrometer FLEXX at BER II at HZB

    OpenAIRE

    Le, M. D.; Skoulatos, M.; Quintero Castro, D.L.; Toft Petersen, R.; Groitl, F.; Rule, K. C.; Habicht, K.

    2014-01-01

    The cold neutron three axis spectrometer FLEXX is a work horse instrument for inelastic neutron scattering matching the sample environment capabilities for high magnetic fields up to 17.5 T and low temperatures down to 30 mK at the BER II neutron source at HZB. During the upgrade of the BER II neutron source and its instruments the primary spectrometer of FLEX [1] was completely rebuilt leading to a substantial increase in the flux reaching the sample [2]. The major benefit from the exchange ...

  12. DNA repair: Dynamic defenders against cancer and aging

    Energy Technology Data Exchange (ETDEWEB)

    Fuss, Jill O.; Cooper, Priscilla K.

    2006-04-01

    You probably weren't thinking about your body's cellular DNA repair systems the last time you sat on the beach in the bright sunshine. Fortunately, however, while you were subjecting your DNA to the harmful effects of ultraviolet light, your cells were busy repairing the damage. The idea that our genetic material could be damaged by the sun was not appreciated in the early days of molecular biology. When Watson and Crick discovered the structure of DNA in 1953 [1], it was assumed that DNA is fundamentally stable since it carries the blueprint of life. However, over 50 years of research have revealed that our DNA is under constant assault by sunlight, oxygen, radiation, various chemicals, and even our own cellular processes. Cleverly, evolution has provided our cells with a diverse set of tools to repair the damage that Mother Nature causes. DNA repair processes restore the normal nucleotide sequence and DNA structure of the genome after damage [2]. These responses are highly varied and exquisitely regulated. DNA repair mechanisms are traditionally characterized by the type of damage repaired. A large variety of chemical modifications can alter normal DNA bases and either lead to mutations or block transcription if not repaired, and three distinct pathways exist to remove base damage. Base excision repair (BER) corrects DNA base alterations that do not distort the overall structure of the DNA helix such as bases damaged by oxidation resulting from normal cellular metabolism. While BER removes single damaged bases, nucleotide excision repair (NER) removes short segments of nucleotides (called oligonucleotides) containing damaged bases. NER responds to any alteration that distorts the DNA helix and is the mechanism responsible for repairing bulky base damage caused by carcinogenic chemicals such as benzo [a]pyrene (found in cigarette smoke and automobile exhaust) as well as covalent linkages between adjacent pyrimidine bases resulting from the ultraviolet

  13. Polymorphisms in base excision repair genes: Breast cancer risk and individual radiosensitivity

    Science.gov (United States)

    Patrono, Clarice; Sterpone, Silvia; Testa, Antonella; Cozzi, Renata

    2014-01-01

    Breast cancer (BC) is the most common cancer among women worldwide. The aetiology and carcinogenesis of BC are not clearly defined, although genetic, hormonal, lifestyle and environmental risk factors have been established. The most common treatment for BC includes breast-conserving surgery followed by a standard radiotherapy (RT) regimen. However, radiation hypersensitivity and the occurrence of RT-induced toxicity in normal tissue may affect patients’ treatment. The role of DNA repair in cancer has been extensively investigated, and an impaired DNA damage response may increase the risk of BC and individual radiosensitivity. Single nucleotide polymorphisms (SNPs) in DNA repair genes may alter protein function and modulate DNA repair efficiency, influencing the development of various cancers, including BC. SNPs in DNA repair genes have also been studied as potential predictive factors for the risk of RT-induced side effects. Here, we review the literature on the association between SNPs in base excision repair (BER) genes and BC risk. We focused on X-ray repair cross complementing group 1 (XRCC1), which plays a key role in BER, and on 8-oxoguanine DNA glycosylase 1, apurinic/apyrimidinic endonuclease 1 and poly (ADP-ribose) polymerase-1, which encode three important BER enzymes that interact with XRCC1. Although no association between SNPs and radiation toxicity has been validated thus far, we also report published studies on XRCC1 SNPs and variants in other BER genes and RT-induced side effects in BC patients, emphasising that large well-designed studies are needed to determine the genetic components of individual radiosensitivity. PMID:25493225

  14. Femoral hernia repair

    Science.gov (United States)

    Femorocele repair; Herniorrhaphy; Hernioplasty - femoral ... During surgery to repair the hernia, the bulging tissue is pushed back in. The weakened area is sewn closed or strengthened. This repair ...

  15. Undescended testicle repair

    Science.gov (United States)

    Orchidopexy; Inguinal orchidopexy; Orchiopexy; Repair of undescended testicle; Cryptorchidism repair ... first year of life without treatment. Undescended testicle repair surgery is recommended for patients whose testicles do ...

  16. DNA repair and gene therapy: implications for translational uses.

    Science.gov (United States)

    Limp-Foster, M; Kelley, M R

    2000-01-01

    Gene therapy has been proposed to have implications in the treatment of cancer. By genetically manipulating the hematopoietic stem cell compartment with genes that confer resistance to chemotherapeutic agents, the dose escalation that is necessary to effectively treat the cancers could potentially be achieved. DNA repair genes are some of the potential candidates to confer increased resistance to chemotherapeutic agents. Although initial focus in this area has been on the direct reversal protein (MGMT), its protective ability is limited to those agents that produce O(6)-methylGuanine cross-links-agents that are not extensively used clinically (e.g., nitrosoureas). Furthermore, most alkylating agents attack more sites in DNA other than O(6)-methylGuanine, such that the protections afforded by MGMT may prevent the initial cytotoxicity, but at a price of increased mutational burden and potential secondary leukemias. Therefore, some of the genes that are being tested as candidates for gene transfer are base excision repair (BER) genes. We and others have found that overexpression of selective BER genes confers resistance to chemotherapeutic agents such as thiotepa, ionizing radiation, bleomycin, and other agents. As these "proof of concept" analyses mature, many more clinically relevant chemotherapeutic agents can be tested for BER protective ability.

  17. Polymorphisms in XPC, XPD, XRCC1, and XRCC3 DNA repair genes and lung cancer risk in a population of Northern Spain

    Directory of Open Access Journals (Sweden)

    Tardón Adonina

    2007-08-01

    Full Text Available Abstract Background Polymorphisms in DNA repair genes have been associated to repair DNA lesions, and might contribute to the individual susceptibility to develop different types of cancer. Nucleotide excision repair (NER, base excision repair (BER, and double-strand break repair (DSBR are the main DNA repair pathways. We investigated the relationship between polymorphisms in two NER genes, XPC (poly (AT insertion/deletion: PAT-/+ and XPD (Asp312Asn and Lys751Gln, the BER gene XRCC1 (Arg399Gln, and the DSBR gene XRCC3 (Thr241Met and the risk of developing lung cancer. Methods A hospital-based case-control study was designed with 516 lung cancer patients and 533 control subjects, matched on ethnicity, age, and gender. Genotypes were determined by PCR-RFLP and the results were analysed using multivariate unconditional logistic regression, adjusting for age, gender and pack-years. Results Borderline association was found for XPC and XPD NER genes polymorphisms, while no association was observed for polymorphisms in BER and DSBR genes. XPC PAT+/+ genotype was associated with no statistically significant increased risk among ever smokers (OR = 1.40; 95%CI = 0.94–2.08, squamous cell carcinoma (OR = 1.44; 95%CI = 0.85–2.44, and adenocarcinoma (OR = 1.72; 95%CI = 0.97–3.04. XPD variant genotypes (312Asn/Asn and 751Gln/Gln presented a not statistically significant risk of developing lung cancer (OR = 1.52; 95%CI = 0.91–2.51; OR = 1.38; 95%CI = 0.85–2.25, respectively, especially among ever smokers (OR = 1.58; 95%CI = 0.96–2.60, heavy smokers (OR = 2.07; 95%CI = 0.74–5.75, and adenocarcinoma (OR = 1.88; 95%CI = 0.97–3.63. On the other hand, individuals homozygous for the XRCC1 399Gln allele presented no risk of developing lung cancer (OR = 0.87; 95%CI = 0.57–1.31 except for individuals carriers of 399Gln/Gln genotype and without family history of cancer (OR = 0.57; 95%CI = 0.33–0.98 and no association was found between XRCC3 Thr241Met

  18. 33 CFR 158.240 - Ship repair yards.

    Science.gov (United States)

    2010-07-01

    ... 33 Navigation and Navigable Waters 2 2010-07-01 2010-07-01 false Ship repair yards. 158.240... Facilities: Oily Mixtures § 158.240 Ship repair yards. The reception facility that services oceangoing ships using a ship repair yard must have a capacity for receiving— (a) An amount of ballast from bunker...

  19. Investigation on the BER performance of the MSK space downlink laser communication system with a power EDFA

    Science.gov (United States)

    Jiao, Wenxiang; Li, Mi; Zhang, Xuping; Dong, Shandong; Song, Yuejiang; Lu, Yuangang

    2014-10-01

    For a space downlink laser communication system with an EDFA as a power amplifier, the performance of its BER deteriorates because the EDFA's characteristics are badly impacted by space radiation. As is investigated in this paper, small divergence-angle, lower than 30μrad, assures that the BER is lower than10-20 although the increase of radiation dose from 0Gy to 250Gy leads to 20 orders of magnitude increase of the BER. Such perfection results from our selection of optimal parameters. In the case of zenith angle, the BER increases smoothly when the zenith angle is lower than 10 degrees. After the point of 10 degrees, however, the BER starts its linearly fast increase. Increasing the radiation dose makes the BER increase and such evolution trend more smooth. Moreover, the increase of receiving diameter leads to linear reduce of BER. It is interesting to note that the evolution becomes nonlinear in region of low receiving diameter when we change the divergence-angle to a higher value 60μrad. Besides, suffering radiation makes the non-linearity mentioned above more apparent. Another try to change the zenith angle to higher value 45° does not show obvious nonlinear effect but it worsens the performance of BER quite a lot. Commonly, the impact of radiation will reach its saturation when the dose of radiation continues to increase. The work will benefit the design of practical space laser communication system with EDFAs.

  20. Confirmatory Factor Analysis of the "Preschool Behavioral and Emotional Rating Scale" (PreBERS) with Preschool Children with Disabilities

    Science.gov (United States)

    Cress, Cynthia J.; Synhorst, Lori; Epstein, Michael H.; Allen, Elizabeth

    2012-01-01

    The "Preschool Behavioral and Emotional Rating Scale" (PreBERS) is a standardized, norm-referenced instrument that assesses emotional and behavioral strengths of preschool children. This study investigated whether the PreBERS four-factor structure (i.e., emotional regulation, school readiness, social confidence, and family involvement)…

  1. Polarization modulational instability in a birefringent optical fiber with fourth order dispersion

    Indian Academy of Sciences (India)

    R Ganapathy; V C Kuriakose

    2001-10-01

    We obtain conditions for the occurrence of polarization modulational instability in the anomalous and normal dispersion regimes for the coupled nonlinear Schrödinger equation modelling fourth order dispersion effects when the linearly polarized pump is oriented at arbitrary angles with respect to the slow and fast axes of the birefringent fiber.

  2. Behavioral and Emotional Strength-Based Assessment of Finnish Elementary Students: Psychometrics of the BERS-2

    Science.gov (United States)

    Sointu, Erkko Tapio; Savolainen, Hannu; Lambert, Matthew C.; Lappalainen, Kristiina; Epstein, Michael H.

    2014-01-01

    When rating scales are used in different countries, thorough investigation of the psychometric properties is needed. We examined the internal structure of the Finnish translated Behavioral and Emotional Rating Scale-2 (BERS-2) using Rasch and confirmatory factor analysis approaches with a sample of youth, parents, and teachers. The results…

  3. Symposium on Operations Research <6, 1981, Augsburg>: 6. Symposium über Operations Research

    OpenAIRE

    Bamberg, Günter

    1981-01-01

    Symposium on Operations Research : 6. Symposium über Operations Research : Univ. Augsburg, Sept. 7-9, 1981 / ed. by Günter Bamberg ... - Pt. 1-2. - Königstein/Ts. : Verl.-Gruppe Athenäum ..., 1981. - XXI, 468, 695 S. - (Methods of operations research ; 43.44)

  4. Analytical estimation of laser phase noise induced BER floor in coherent receiver with digital signal processing.

    Science.gov (United States)

    Vanin, Evgeny; Jacobsen, Gunnar

    2010-03-01

    The Bit-Error-Ratio (BER) floor caused by the laser phase noise in the optical fiber communication system with differential quadrature phase shift keying (DQPSK) and coherent detection followed by digital signal processing (DSP) is analytically evaluated. An in-phase and quadrature (I&Q) receiver with a carrier phase recovery using DSP is considered. The carrier phase recovery is based on a phase estimation of a finite sum (block) of the signal samples raised to the power of four and the phase unwrapping at transitions between blocks. It is demonstrated that errors generated at block transitions cause the dominating contribution to the system BER floor when the impact of the additive noise is negligibly small in comparison with the effect of the laser phase noise. Even the BER floor in the case when the phase unwrapping is omitted is analytically derived and applied to emphasize the crucial importance of this signal processing operation. The analytical results are verified by full Monte Carlo simulations. The BER for another type of DQPSK receiver operation, which is based on differential phase detection, is also obtained in the analytical form using the principle of conditional probability. The principle of conditional probability is justified in the case of differential phase detection due to statistical independency of the laser phase noise induced signal phase error and the additive noise contributions. Based on the achieved analytical results the laser linewidth tolerance is calculated for different system cases.

  5. Grossforschung in neuen Dimensionen : Denker unserer Zeit über die aktuelle Elementarteilchenphysik am CERN

    CERN Document Server

    Blanchard, Philippe; Kommer, Christoph; ZiF-Konferenz 2013; CERN : Large-scale Research in New Dimension

    2015-01-01

    Der 4. Juli 2012 stellt ein historisches Datum für das Europäische Kernforschungszentrum CERN in Genf dar: die Verkündung der Entdeckung des letzten, vorhergesagten, noch fehlenden und lange gesuchten Elementarteilchens, des Higgs-Bosons. Ein Jahr später kommen im Rahmen der Konferenz des Zentrums für interdisziplinäre Forschung (ZiF) in Bielefeld eine Vielzahl der mit dem Großprojekt am CERN verbundenen Wissenschaftler zusammen, um nicht nur über die Entdeckung des Teilchens, sondern vor allem über die Realisierung und Bedeutung eines derart ungeheuren Unterfangens für solch ein wissenschaftliches Großprojekt zu berichten. Der Generaldirektor des CERN, Prof. Dr. Rolf-Dieter Heuer, liefert in seinem Eröffnungsvortrag die Grundlage für die Diskussion der vielerlei Aspekte, die dabei ins Spiel kommen. So finden sich im vorliegenden Band zum einen Berichte über die Großforschung selbst: von der Entdeckung des Higgs-Teilchens über die Erforschung des Quark-Gluon-Plasmas und die Bedeutung von Th...

  6. Analysis of BER Performance of the Spread Spectrum Communication System with Constrained Spreading Code

    OpenAIRE

    長谷川, 孝明; 羽渕, 裕真

    1996-01-01

    Copyright notice. c1996 IEICE All rights reserved. "Analysis of BER Performance of the Spread Spectrum Communication System with Constrained Spreading Code"Hiromasa HABUCHI, Toshio TAKEBAYASHI, Takaaki HASEGAWA. IEICE TRANSACTIONS on Fundamentals of Electronics, Communications and Computer Sciences ,1996 Vol.E79-A No.12 pp. 2078-2080 許諾No.07RB0055.

  7. Ein Lehrbuch über Psychiatrie und Psychotherapie – Geschlechtsunterschiede unter der Lupe?

    Directory of Open Access Journals (Sweden)

    Isabella Heuser

    2007-07-01

    Full Text Available Anke Rohde und Andreas Marneros haben sich ein hohes Ziel gesetzt: ein übersichtliches Lehrbuch für Psychiatrie und Psychotherapie, das erstmals eine systematische Zusammenstellung des Wissens über geschlechtsspezifische Aspekte von Symptomatologie, Epidemiologie, Diagnostik, Pharmakotherapie und Psychotherapie psychischer Störungen enthält. Bemerkenswert ist dabei zweierlei: Erstens werden bei der Betrachtung geschlechtsspezifischer Unterschiede im Sinne der Genderforschung Frauen und Männer berücksichtigt, zweitens wird ein vollständiger Überblick sowohl über die häufigen und bekannten psychischen Störungen als auch die äußerst seltenen psychiatrischen Erkrankungen der gesamten Altersspanne gegeben. Wenngleich die Qualität der einzelnen Beiträge deutlich zwischen sehr differenzierter und leider auch für ein Handbuch eindeutig zu oberflächlicher Betrachtung variiert, liegt in dem Band ein weitgehend informatives Nachschlagewerk vor, das einen ersten Überblick über die geschlechtsspezifische Psychiatrie gibt.

  8. Intestinal obstruction repair

    Science.gov (United States)

    Repair of volvulus; Intestinal volvulus - repair; Bowel obstruction - repair ... Intestinal obstruction repair is done while you are under general anesthesia . This means you are asleep and DO NOT feel pain. ...

  9. Aortic aneurysm repair - endovascular

    Science.gov (United States)

    EVAR; Endovascular aneurysm repair - aorta; AAA repair - endovascular; Repair - aortic aneurysm - endovascular ... Endovascular aortic repair is done because your aneurysm is very large, growing quickly, or is leaking or bleeding. You may have ...

  10. Motorcycle Repair.

    Science.gov (United States)

    Hein, Jim; Bundy, Mike

    This motorcycle repair curriculum guide contains the following ten areas of study: brake systems, clutches, constant mesh transmissions, final drives, suspension, mechanical starting mechanisms, electrical systems, fuel systems, lubrication systems, and overhead camshafts. Each area consists of one or more units of instruction. Each instructional…

  11. Turbine repair process, repaired coating, and repaired turbine component

    Energy Technology Data Exchange (ETDEWEB)

    Das, Rupak; Delvaux, John McConnell; Garcia-Crespo, Andres Jose

    2015-11-03

    A turbine repair process, a repaired coating, and a repaired turbine component are disclosed. The turbine repair process includes providing a turbine component having a higher-pressure region and a lower-pressure region, introducing particles into the higher-pressure region, and at least partially repairing an opening between the higher-pressure region and the lower-pressure region with at least one of the particles to form a repaired turbine component. The repaired coating includes a silicon material, a ceramic matrix composite material, and a repaired region having the silicon material deposited on and surrounded by the ceramic matrix composite material. The repaired turbine component a ceramic matrix composite layer and a repaired region having silicon material deposited on and surrounded by the ceramic matrix composite material.

  12. The Base Excision Repair system of Salmonella enterica serovar typhimurium counteracts DNA damage by host nitric oxide.

    Directory of Open Access Journals (Sweden)

    Anthony R Richardson

    2009-05-01

    Full Text Available Intracellular pathogens must withstand nitric oxide (NO. generated by host phagocytes. Salmonella enterica serovar Typhimurium interferes with intracellular trafficking of inducible nitric oxide synthase (iNOS and possesses multiple systems to detoxify NO.. Consequently, the level of NO. stress encountered by S. Typhimurium during infection in vivo has been unknown. The Base Excision Repair (BER system recognizes and repairs damaged DNA bases including cytosine and guanine residues modified by reactive nitrogen species. Apurinic/apyrimidinic (AP sites generated by BER glycosylases require subsequent processing by AP endonucleases. S. Typhimurium xth nfo mutants lacking AP endonuclease activity exhibit increased NO. sensitivity resulting from chromosomal fragmentation at unprocessed AP sites. BER mutant strains were thus used to probe the nature and extent of nitrosative damage sustained by intracellular bacteria during infection. Here we show that an xth nfo S. Typhimurium mutant is attenuated for virulence in C3H/HeN mice, and virulence can be completely restored by the iNOS inhibitor L-NIL. Inactivation of the ung or fpg glycosylase genes partially restores virulence to xth nfo mutant S. Typhimurium, demonstrating that NO. fluxes in vivo are sufficient to modify cytosine and guanine bases, respectively. Mutants lacking ung or fpg exhibit NO.-dependent hypermutability during infection, underscoring the importance of BER in protecting Salmonella from the genotoxic effects of host NO.. These observations demonstrate that host-derived NO. damages Salmonella DNA in vivo, and the BER system is required to maintain bacterial genomic integrity.

  13. Analisis Parameter Ber Dan C/N Dengan Lnb Combo Pada Teknologi Dvb-S2

    Directory of Open Access Journals (Sweden)

    Wahyu Pamungkas

    2013-11-01

    Full Text Available Instalasi antena parabola berfungsi untuk memudahkan pada saat pengarahan pointing antena ke satelit yang dituju. Permasalahan yang diketahui yaitu bagaimana perilaku parameter Bit Error Rate (BER dan Carrier to Noise (C/N pada LNB Combo yang menggunakan teknologi DVB-S2. Setelah instalasi antena parabola dilakukan dan sukses, maka langkah selanjutnya yaitu melakukan pointing antena. Pointing antena diarahkan pada posisi satelit yang akan dituju. Satelit yang akan dituju yaitu Palapa D menggunakan frekuensi C-Band sedangkan Ku-Band diarahkan pada satelit NSS 6. Setelah pointing selesai dilakukan maka langkah selanjutnya yaitu menghubungkan dengan Digital Video Broadcasting Satellite Second Generation (DVB-S2. DVB-S2 merupakan receiver. Parameter yang diamati yaitu parameter BER dan C/N. Parameter BER merupakan perbandingan dengan jumlah bit yang diterima secara tidak benar dengan jumlah bit informasi yang ditransmisikan pada selang waktu tertentu. Parameter C/N merupakan perbandingan nilai pada carrier yang diterima dengan nilai sinyal noise yang dihasilkan dalam suatu link. Diperlukan juga Low Noise Block (LNB Combo yang berguna untuk mentransmisikan sinyal ke receiver. LNB yang digunakan merupakan LNB Combo, dimana dua buah frekuensi yakni C-Band dan KU-Band menjadi satu dalam sebuah LNB. Setelah melakukan pengukuran dan melihat hasil pengukuran, dapat disimpulkan bahwa LNB Combo berpengaruh pada sinyal C-Band yang dihasilkan, sinyal C-Band akan mengalami penurunan kualitas, ini dibuktikan dari hasil pengukuran yang telah dilakukan bahwa nilai parameter C/N dan BER pada Ku-Band lebih baik daripada nilai parameter C/N dan BER pada CBand.

  14. PARP-1: Friend or Foe of DNA Damage and Repair in Tumorigenesis?

    Energy Technology Data Exchange (ETDEWEB)

    Swindall, Amanda F.; Stanley, Jennifer A. [Department of Radiation Oncology Comprehensive Cancer Center, University of Alabama at Birmingham School of Medicine, 176F HSROC Suite 2232B, 1700 6th Avenue South, Birmingham, AL 35249 (United States); Yang, Eddy S., E-mail: eyang@uab.edu [Department of Radiation Oncology Comprehensive Cancer Center, University of Alabama at Birmingham School of Medicine, 176F HSROC Suite 2232B, 1700 6th Avenue South, Birmingham, AL 35249 (United States); Department of Cell, Developmental and Integrative Biology, University of Alabama at Birmingham, Birmingham, AL 35249 (United States); Department of Pharmacology and Toxicology, University of Alabama at Birmingham, Birmingham, AL 35249 (United States)

    2013-07-26

    Oxidative stress induced by reactive oxygen species can result in DNA damage within cells and subsequently increase risk for carcinogenesis. This may be averted by repair of DNA damage through the base or nucleotide excision repair (BER/NER) pathways. PARP, a BER protein, is known for its role in DNA-repair. However, multiple lesions can occur within a small range of DNA, known as oxidative clustered DNA lesions (OCDLs), which are difficult to repair and may lead to the more severe DNA double-strand break (DSB). Inefficient DSB repair can then result in increased mutagenesis and neoplastic transformation. OCDLs occur more frequently within a variety of tumor tissues. Interestingly, PARP is highly expressed in several human cancers. Additionally, chronic inflammation may contribute to tumorigenesis through ROS-induced DNA damage. Furthermore, PARP can modulate inflammation through interaction with NFκB and regulating the expression of inflammatory signaling molecules. Thus, the upregulation of PARP may present a double-edged sword. PARP is needed to repair ROS-induced DNA lesions, but PARP expression may lead to increased inflammation via upregulation of NFκB signaling. Here, we discuss the role of PARP in the repair of oxidative damage versus the formation of OCDLs and speculate on the feasibility of PARP inhibition for the treatment and prevention of cancers by exploiting its role in inflammation.

  15. Partial loss of the DNA repair scaffolding protein, Xrcc1, results in increased brain damage and reduced recovery from ischemic stroke in mice.

    Science.gov (United States)

    Ghosh, Somnath; Canugovi, Chandrika; Yoon, Jeong Seon; Wilson, David M; Croteau, Deborah L; Mattson, Mark P; Bohr, Vilhelm A

    2015-07-01

    Oxidative DNA damage is mainly repaired by base excision repair (BER). Previously, our laboratory showed that mice lacking the BER glycosylases 8-oxoguanine glycosylase 1 (Ogg1) or nei endonuclease VIII-like 1 (Neil1) recover more poorly from focal ischemic stroke than wild-type mice. Here, a mouse model was used to investigate whether loss of 1 of the 2 alleles of X-ray repair cross-complementing protein 1 (Xrcc1), which encodes a nonenzymatic scaffold protein required for BER, alters recovery from stroke. Ischemia and reperfusion caused higher brain damage and lower functional recovery in Xrcc1(+/-) mice than in wild-type mice. Additionally, a greater percentage of Xrcc1(+/-) mice died as a result of the stroke. Brain samples from human individuals who died of stroke and individuals who died of non-neurological causes were assayed for various steps of BER. Significant losses of thymine glycol incision, abasic endonuclease incision, and single nucleotide incorporation activities were identified, as well as lower expression of XRCC1 and NEIL1 proteins in stroke brains compared with controls. Together, these results suggest that impaired BER is a risk factor in ischemic brain injury and contributes to its recovery.

  16. Rev1 is a base excision repair enzyme with 5′-deoxyribose phosphate lyase activity

    Science.gov (United States)

    Prasad, Rajendra; Poltoratsky, Vladimir; Hou, Esther W.; Wilson, Samuel H.

    2016-01-01

    Rev1 is a member of the Y-family of DNA polymerases and is known for its deoxycytidyl transferase activity that incorporates dCMP into DNA and its ability to function as a scaffold factor for other Y-family polymerases in translesion bypass events. Rev1 also is involved in mutagenic processes during somatic hypermutation of immunoglobulin genes. In light of the mutation pattern consistent with dCMP insertion observed earlier in mouse fibroblast cells treated with a base excision repair-inducing agent, we questioned whether Rev1 could also be involved in base excision repair (BER). Here, we uncovered a weak 5′-deoxyribose phosphate (5′-dRP) lyase activity in mouse Rev1 and demonstrated the enzyme can mediate BER in vitro. The full-length Rev1 protein and its catalytic core domain are similar in their ability to support BER in vitro. The dRP lyase activity in both of these proteins was confirmed by NaBH4 reduction of the Schiff base intermediate and kinetics studies. Limited proteolysis, mass spectrometry and deletion analysis localized the dRP lyase active site to the C-terminal segment of Rev1's catalytic core domain. These results suggest that Rev1 could serve as a backup polymerase in BER and could potentially contribute to AID-initiated antibody diversification through this activity. PMID:27683219

  17. Evaluation of the radioinduced damage, repair capacity and cell death on human tumorigenic (T-47D and MCF-7) and nontumorigenic (MCF-10) cell lines of breast; Avaliacao do dano radioinduzido, capacidade de reparo e morte celular em celulas humanas tumorais (T-47D e MCF-7) e nao tumorais (MCF-10) de mama

    Energy Technology Data Exchange (ETDEWEB)

    Valdoge, Flavia Gomes Silva

    2008-07-01

    Breast cancer is one of the most common malignancies that account women, representing about one in three of all female neoplasm. Approximately, 90% of cases are considered sporadic, attributed to somatic events and about 10% have a family history and this only 4 - 5 % is due to hereditary factors. In the clinic, ionizing radiation is a major tool utilized in the control of tumour growth, besides surgery and chemotherapy. There is, however, little information concerning cellular response to the action of ionizing radiation in the target cells, i.e., cell lines originating from breast cancer. The present study proposed to analyze the radiosensitivity of the human tumorigenic (T-47D and MCF-7) and non tumorigenic (MCF-10) cell lines, originating from breast and submitted to various doses (0.5 to 30 Gy) of {sup 60}Co rays (0.72 - 1.50 Gy/min). For this purpose, DNA radioinduced damage, repair capacity and cell death were utilized as parameters of radiosensitivity by micronucleus, single cell gel electrophoresis (Comet assay) and cell viability techniques. The data obtained showed that tumorigenic cell lines were more radiosensitive than non tumorigenic breast cells in all assays here utilized. The T-47D cell line was presenting the highest amount of radioinduced damage, a more accelerated proliferation rate and a higher rate of cell death. The three cell lines presented a relatively efficient repair capacity, since one hour after the irradiation all of them showed a considerable reduction of radioinduced damage. The techniques employed showed to be secure, sensitive and reproducible, allowing to quantify and evaluate DNA damage, repair capacity and cell death in the three human breast cell lines. (author)

  18. Complex DNA repair pathways as possible therapeutic targets to overcome temozolomide resistance in glioblastoma

    Directory of Open Access Journals (Sweden)

    Koji eYoshimoto

    2012-12-01

    Full Text Available Many conventional chemotherapeutic drugs exert their cytotoxic function by inducing DNA damage in the tumor cell. Therefore, a cell-inherent DNA repair pathway, which reverses the DNA-damaging effect of the cytotoxic drugs, can mediate therapeutic resistance to chemotherapy. The monofunctional DNA-alkylating agent temozolomide (TMZ is a commonly used chemotherapeutic drug and the gold standard treatment for glioblastoma. Although the activity of DNA repair protein O6-methylguanine-DNA methyltransferase (MGMT has been described as the main modulator to determine the sensitivity of glioblastoma to TMZ, a subset of glioblastoma does not respond despite MGMT inactivation, suggesting that another DNA repair mechanism may also modulate the tolerance to TMZ. Considerable interest has focused on MGMT, mismatch repair (MMR, and the base-excision repair (BER pathway in the mechanism of mediating TMZ resistance, but emerging roles for the DNA strand-break repair pathway have been demonstrated. In the first part of this review article, we briefly review the significant role of MGMT, MMR, and the BER pathway in the tolerance to TMZ; in the last part, we review the recent publications that demonstrate possible roles of DNA strand-break repair pathways, such as single-strand break (SSB repair and double-strand break (DSB repair, as well as the Fanconi anemia pathway in the repair process after alkylating agent-based therapy. It is possible that all of these repair pathways have a potential to modulate the sensitivity to TMZ and aid in overcoming the therapeutic resistance in the clinic.

  19. The Effects of Continuous and Interrupted Episiotomy Repair on Pain Severity and Rate of Perineal Repair: A Controlled Randomized Clinical Trial

    Directory of Open Access Journals (Sweden)

    Shirin Hasanpoor

    2012-08-01

    Full Text Available Introduction: Perineal pain is the most common complaint after episiotomy. It imposes extra pressure on mothers who attempt to adapt to their new conditions. Therefore, the present study was performed to compare pain severity and perineal repair in two episiot-omy repair methods. Methods: In this clinical trial, 100 primiparous women who re-ferred to hospitals of Tabriz (Iran for delivery were randomly allocated into two groups of 50 to undergo either continuous or interrupted episiotomy repair. A visual analogue scale (VAS was used to evaluate pain severity 12-18 hours after episiotomy repair and also 10 days after delivery. Perineal repair rate was also assessed using the REEDA (redness, edema, ecchymosis, discharge, and approximation scoring scale. The obtained data was analyzed in SPSS15. Results: Statistical tests did not show significant differ-ences between the 2 groups in pain severity variations or REEDA scores at 12-18 hours and the 10th day after delivery. However, the mean required time for repair and the num-ber of used threads were significantly lower in the continuous repair group (p < 0.001. Conclusion: The results of this study showed that pain severity and episiotomy repair rate were similar in the two methods. Nevertheless, shorter time of repair and fewer threads were required using the continuous repair method. Therefore, this method would provide better services for mothers and reduce the required time, energy, and costs.

  20. Rational Inhibitors of DNA Base Excision Repair Enzymes: New Tools for Elucidating the Role of BER in Cancer Chemotherapy. Addendum

    Science.gov (United States)

    2006-11-01

    PROCEDURES2 Materials. The 2′-deoxynucleoside phosphoramidites, CPG supports, and DNA synthesis reagents were purchased from Glen Research (Sterling, VA...flipping enzymes (28). EXPERIMENTAL PROCEDURES Materials. The 2′-deoxynucleoside phosphoramidites, CPG supports, and DNA synthesis reagents were...28425. (21) Klarmann, G. J.; Chen, X.; North, T. W.; Preston, B. D. J. Biol. Chem. 2003, 278, 7902- 7909 . (22) Mansky, L. M.; Preveral, S.; Selig, L

  1. Ergodic capacity of switch-and-examine combining under flat Rayleigh fading channels

    Institute of Scientific and Technical Information of China (English)

    ZHAO Shuang; YAO Wen-bin; YANG Hong-wen; WANG Ya-feng

    2009-01-01

    Switch-and-examine combining (SEC) is an interesting diversity technique that is simpler than selection combining (SC), whereas its performances is similar in terms of bit error rate (BER) and diversity order. As ergodic capacity is also a key performance index in modern wireless systems, this article analyzes the ergodic capacity of the SEC system. The numerical results show that the ergodic capacity of SEC with optimal threshold is similar to that of SC for arbitrary number of diversity branches.

  2. Station Capacity

    DEFF Research Database (Denmark)

    Landex, Alex

    2011-01-01

    Stations are often limiting the capacity of railway networks. This is due to extra need of tracks when trains stand still, trains turning around, and conflicting train routes. Although stations are often the capacity bottlenecks, most capacity analysis methods focus on open line capacity. Therefore......, this paper presents methods to analyze station capacity. Four methods to analyze station capacity are developed. The first method is an adapted UIC 406 capacity method that can be used to analyze switch zones and platform tracks at stations that are not too complex. The second method examines the need...... the probability of conflicts and the minimum headway times into account. The last method analyzes how optimal platform tracks are used by examining the arrival and departure pattern of the trains. The developed methods can either be used separately to analyze specific characteristics of the capacity of a station...

  3. Cu-Al-O Nanofi bers Fabricated by Electrospinning and Their Ozone Sensing Properties at Room Temperature

    Institute of Scientific and Technical Information of China (English)

    L Mo; CAO Jiajia; WANG Yu; SHEN Hongzhi; WANG Yiding

    2015-01-01

    Cu-Al-O nanofibers are synthesized by an electrospinning method. After electrospinning process, these nanofi bers were thermally treated at different temperatures from 900 to 1 100ć. The morphology and crystal structure of thefi bers were analyzed by scanning electron microscopy and X-ray diffraction. Thick fi lm gas sensors were fabricated by spinning the nanofi bers on a ceramic substrate with Au-Pt interdigitated electrodes. These sensors exhibited high ozone sensing properties at room temperature. When the sensors were exposed to 100 ppm ozone, the response time was about 2.74 s, and the recovery was about 12.68 s.

  4. Controlling particle size in the Stöber process and incorporation of calcium.

    Science.gov (United States)

    Greasley, Sarah L; Page, Samuel J; Sirovica, Slobodan; Chen, Shu; Martin, Richard A; Riveiro, Antonio; Hanna, John V; Porter, Alexandra E; Jones, Julian R

    2016-05-01

    The Stӧber process is commonly used for synthesising spherical silica particles. This article reports the first comprehensive study of how the process variables can be used to obtain monodispersed particles of specific size. The modal particle size could be selected within in the range 20-500 nm. There is great therapeutic potential for bioactive glass nanoparticles, as they can be internalised within cells and perform sustained delivery of active ions. Biodegradable bioactive glass nanoparticles are also used in nanocomposites. Modification of the Stӧber process so that the particles can contain cations such as calcium, whilst maintaining monodispersity, is desirable. Here, whilst calcium incorporation is achieved, with a homogenous distribution, careful characterisation shows that much of the calcium is not incorporated. A maximum of 10 mol% CaO can be achieved and previous reports are likely to have overestimated the amount of calcium incorporated.

  5. Performance Improvement of BER in MIMO Systems with SVD-Based Precoding Approach

    Directory of Open Access Journals (Sweden)

    Akash Sethi

    2013-10-01

    Full Text Available Interference is the factor which limits the performance in cellular network. Empowered by precoding and decoding, a spatially multiplexed Multiple-Input Multiple-Output (MIMO system becomes a convenient framework to offer high data rate, diversity and interference management. In this paper, we discuss precoding scheme to mitigate the effect of channel fading in MIMO system where there is no limit in number of antennas at transmitter and receiver. With the knowledge of channel state information (CSI the transmitted signal is defined such that the channel fading effect is greatly mitigated. This will improve the BER performance of the MIMO system. For our proposed scheme, we use the Singular Value Decomposition (SVD based approach to design the transmitted signal such that it mitigate the effect of channel fading. After simulation, we observe that the BER performance of MIMO system is better than when equalization technique used alone.

  6. Theoria cum praxi? Über die (Un-?) Vereinbarkeit wissenschaftlicher und ökonomischer Anforderungen

    OpenAIRE

    Kritzmöller, Monika

    2004-01-01

    Gottfried Wilhelm LEIBNIZ maß der Zusammenarbeit und wechselseitigen Befruchtung von Theorie und Praxis ein derart hohes Gewicht bei, dass er das Motto "Theoria cum praxi" bereits 1696 als Wahlspruch über sein Gesamtwerk stellte. An der Notwendigkeit einer Kooperation zwischen Praxis – und damit zumeist: Wirtschaft – und Wissenschaft hat sich seither nicht viel geändert. Dennoch wäre es ein Trugschluss zu glauben, dass die vergangenen drei Jahrhunderte zu einem Kraftschluss zwischen beiden Sp...

  7. Laktoseintoleranz bei Morbus Crohn und Colitis ulcerosa unter Berücksichtigung der ethnischen Herkunft

    OpenAIRE

    Demirci, Ilknur

    2007-01-01

    Die Frage der Inzidenz einer Laktosemalabsorption bei Morbus Crohn und Colitis ulcerosa wurde retrospektiv unter Berücksichtigung der ethnischen Herkunft untersucht. Bei 243 Patienten wurden zur Diagnose einer Laktosemalabsorption der Laktosetoleranztest und der H2-Atemtest durchgeführt. Dabei fand sich bei 23 (14,3%) von 161 Morbus Crohn Patienten eine Laktosemalabsorption. Nach ethnischer Differenzierung, zeigte sich in der mitteleuropäischen Population eine Häufigkeit von 13,2%...

  8. Studie über die Erzeugungs- und Vermarktungsstruktur des Bienenzuchtsektors in Deutschland

    OpenAIRE

    Efken, Josef; Bernhardt, Angelina

    2016-01-01

    Die Studie hat zum Ziel, einen Überblick über den deutschen Markt für Honig zu geben. Es werden die Imkereistruktur und die Beziehungen zwischen den Marktpartnern dargestellt. Daneben werden die Versorgungsbilanz sowie die Nachfrage betrachtet, bei der Deutschland als einer der größten Konsumenten auch weltweit eine entscheidende Rolle spielt. Zu unterscheiden sind hierbei Honige, die via Direktvermarktung vom Imker vertrieben werden, und Honige aus dem Einzelhandel. Diese Segmente existieren...

  9. A survey of BER Performance of Generalized MC DS - CDMA System

    Directory of Open Access Journals (Sweden)

    Rishi Choubey

    2013-06-01

    Full Text Available n today’s eramultipleaccess interferenceinmulticarrier direct sequence-code division multipleaccess (MC DS-CDMA is the most importantdifficulty that dependsmainly on the correlationproperties of the spreadingsequences as well as theshape of the chip waveforms.In this paper wepresent a survey on BER performance ofgeneralized MC DS-CDMA. We study and analysedthe performance measurement with theiradvantages and limitations. Based on study we alsosuggest some future suggestions which are usefulfor future research.

  10. Über das Selbstverständnis der Pädagogik als Wissenschaft

    OpenAIRE

    Wüst, Andrea

    2011-01-01

    Was ist Pädagogik? Eine der vielleicht wichtigsten Fragen wissenschaftlicher Pädagogik ist die nach ihrem Wissenschaftscharakter und nach ihrem eigenen Selbstverständnis. Denn nicht zuletzt wird daran ihre Bedeutung für die pädagogische und gesellschaftliche Praxis gemessen und ihre Stellung gegenüber den anderen Wissenschaften ausgewiesen. Angesichts der Erwartungen und der Kritik, mit der sich wissenschaftliche Pädagogik immer wieder konfrontiert sieht, angesichts der Vielzahl unterschiedli...

  11. DREMECELS: A Curated Database for Base Excision and Mismatch Repair Mechanisms Associated Human Malignancies.

    Directory of Open Access Journals (Sweden)

    Ankita Shukla

    Full Text Available DNA repair mechanisms act as a warrior combating various damaging processes that ensue critical malignancies. DREMECELS was designed considering the malignancies with frequent alterations in DNA repair pathways, that is, colorectal and endometrial cancers, associated with Lynch syndrome (also known as HNPCC. Since lynch syndrome carries high risk (~40-60% for both cancers, therefore we decided to cover all three diseases in this portal. Although a large population is presently affected by these malignancies, many resources are available for various cancer types but no database archives information on the genes specifically for only these cancers and disorders. The database contains 156 genes and two repair mechanisms, base excision repair (BER and mismatch repair (MMR. Other parameters include some of the regulatory processes that have roles in these disease progressions due to incompetent repair mechanisms, specifically BER and MMR. However, our unique database mainly provides qualitative and quantitative information on these cancer types along with methylation, drug sensitivity, miRNAs, copy number variation (CNV and somatic mutations data. This database would serve the scientific community by providing integrated information on these disease types, thus sustaining diagnostic and therapeutic processes. This repository would serve as an excellent accompaniment for researchers and biomedical professionals and facilitate in understanding such critical diseases. DREMECELS is publicly available at http://www.bioinfoindia.org/dremecels.

  12. BER Performance Analysis of Rake Receiver in Rayleigh Fading Channel for UMTS environment

    Directory of Open Access Journals (Sweden)

    Pravindra Kumar

    2010-06-01

    Full Text Available The goal for the third generation of mobile communications system is to integrate a wide variety of communication services such as high speed data, video and multimedia traffic as well as voice signals. Under the Universal Mobile Telecommunication System (UMTS environment the Third Generation (3G has many advantages such as highly efficient spectrum utilisation and variable user data rates. In this paper, we present the bit error rate (BER performance analysis of Rake Receiver under UMTS environment with BPSK modulation technique and the convolutional coding at the transmitter and viterbi decoding at the receiver side. The Standard Gaussian Approximation (SGA is used to evaluate the performance of Rake Receiver over a frequency selective Rayleigh fading channel. The data is modulated, encoded, spread and transmitted through a frequency selective Rayleigh fading channel. The transmitted signal is corrupted by multiple access interference, and is further corrupted by AWGNat the receiver. In the receiver, dispreading, decoded and demodulated. Rake Receiver, directive antenna are employed to improve the system performance. We examined the BER performance of Rake Receiver with, varying the number of users, spreading factor, Rake fingers, Interfering Cells, and the value of directivity of antenna at base Station. From the results we have seen that the BER performance of Rake Receiver is affected by varying these parameters and gives useful results.

  13. Power Consumption and BER of Flip-Flop Inserted Global Interconnect

    Directory of Open Access Journals (Sweden)

    Jingye Xu

    2007-01-01

    Full Text Available In nanometer scale integrated circuits, concurrent insertion of repeaters and sequential elements into the global interconnect lines has been proposed to support multicycle communication—a concept known as interconnect pipelining. The design targets of an interconnect-pipelining scheme are to ensure high reliability, low-power consumption, and less delay cycles. This paper presents an in-depth analysis of the reliability in terms of bit error rate (BER and the power consumption of wire-pipelining scheme. In this analysis, the dependencies of power consumption and BER on the number of inserted flip-flops, and the size of repeaters are illustrated. To trade off the design targets (wire delay, BER, and power consumption, a methodology is developed to optimize the repeater size and the number of flip-flops inserted which maximize a user-specified figure of merit. The methodology is demonstrated by calculating optimal solutions for interconnect pipelining for some International Technology Roadmap for Semiconductor technology nodes.

  14. Station Capacity

    DEFF Research Database (Denmark)

    Landex, Alex

    2011-01-01

    Stations are often limiting the capacity of railway networks. This is due to extra need of tracks when trains stand still, trains turning around, and conflicting train routes. Although stations are often the capacity bottlenecks, most capacity analysis methods focus on open line capacity. Therefore......, this paper presents methods to analyze station capacity. Four methods to analyze station capacity are developed. The first method is an adapted UIC 406 capacity method that can be used to analyze switch zones and platform tracks at stations that are not too complex. The second method examines the need...... for platform tracks and the probability that arriving trains will not get a platform track immediately at arrival. The third method is a scalable method that analyzes the conflicts in the switch zone(s). In its simplest stage, the method just analyzes the track layout while the more advanced stages also take...

  15. Genetic and biochemical characterization of human AP endonuclease 1 mutants deficient in nucleotide incision repair activity.

    Directory of Open Access Journals (Sweden)

    Aurore Gelin

    Full Text Available BACKGROUND: Human apurinic/apyrimidinic endonuclease 1 (APE1 is a key DNA repair enzyme involved in both base excision repair (BER and nucleotide incision repair (NIR pathways. In the BER pathway, APE1 cleaves DNA at AP sites and 3'-blocking moieties generated by DNA glycosylases. In the NIR pathway, APE1 incises DNA 5' to a number of oxidatively damaged bases. At present, physiological relevance of the NIR pathway is fairly well established in E. coli, but has yet to be elucidated in human cells. METHODOLOGY/PRINCIPAL FINDING: We identified amino acid residues in the APE1 protein that affect its function in either the BER or NIR pathway. Biochemical characterization of APE1 carrying single K98A, R185A, D308A and double K98A/R185A amino acid substitutions revealed that all mutants exhibited greatly reduced NIR and 3'-->5' exonuclease activities, but were capable of performing BER functions to some extent. Expression of the APE1 mutants deficient in the NIR and exonuclease activities reduced the sensitivity of AP endonuclease-deficient E. coli xth nfo strain to an alkylating agent, methylmethanesulfonate, suggesting that our APE1 mutants are able to repair AP sites. Finally, the human NIR pathway was fully reconstituted in vitro using the purified APE1, human flap endonuclease 1, DNA polymerase beta and DNA ligase I proteins, thus establishing the minimal set of proteins required for a functional NIR pathway in human cells. CONCLUSION/SIGNIFICANCE: Taken together, these data further substantiate the role of NIR as a distinct and separable function of APE1 that is essential for processing of potentially lethal oxidative DNA lesions.

  16. DNA glycosylases involved in base excision repair may be associated with cancer risk in BRCA1 and BRCA2 mutation carriers

    DEFF Research Database (Denmark)

    Osorio, Ana; Milne, Roger L; Kuchenbaecker, Karoline

    2014-01-01

    Single Nucleotide Polymorphisms (SNPs) in genes involved in the DNA Base Excision Repair (BER) pathway could be associated with cancer risk in carriers of mutations in the high-penetrance susceptibility genes BRCA1 and BRCA2, given the relation of synthetic lethality that exists between one of th...

  17. DNA Glycosylases Involved in Base Excision Repair May Be Associated with Cancer Risk in BRCA1 and BRCA2 Mutation Carriers

    NARCIS (Netherlands)

    Osorio, Ana; Milne, Roger L.; Kuchenbaecker, Karoline; Vaclova, Tereza; Pita, Guillermo; Alonso, Rosario; Peterlongo, Paolo; Blanco, Ignacio; de la Hoya, Miguel; Duran, Mercedes; Diez, Orland; Ramon y Cajal, Teresa; Konstantopoulou, Irene; Martinez-Bouzas, Cristina; Conejero, Raquel Andres; Soucy, Penny; McGuffog, Lesley; Barrowdale, Daniel; Lee, Andrew; Arver, Brita; Rantala, Johanna; Loman, Niklas; Ehrencrona, Hans; Olopade, Olufunmilayo I.; Beattie, Mary S.; Domchek, Susan M.; Nathanson, Katherine; Rebbeck, Timothy R.; Arun, Banu K.; Karlan, Beth Y.; Walsh, Christine; Lester, Jenny; John, Esther M.; Whittemore, Alice S.; Daly, Mary B.; Southey, Melissa; Hopper, John; Terry, Mary B.; Buys, Saundra S.; Janavicius, Ramunas; Dorfling, Cecilia M.; van Rensburg, Elizabeth J.; Steele, Linda; Neuhausen, Susan L.; Ding, Yuan Chun; Hansen, Thomas V. O.; Jonson, Lars; Ejlertsen, Bent; Gerdes, Anne-Marie; Infante, Mar; Herraez, Belen; Moreno, Leticia Thais; Weitzel, Jeffrey N.; Herzog, Josef; Weeman, Kisa; Manoukian, Siranoush; Peissel, Bernard; Zaffaroni, Daniela; Scuvera, Giulietta; Bonanni, Bernardo; Mariette, Frederique; Volorio, Sara; Viel, Alessandra; Varesco, Liliana; Papi, Laura; Ottini, Laura; Tibiletti, Maria Grazia; Radice, Paolo; Yannoukakos, Drakoulis; Garber, Judy; Ellis, Steve; Frost, Debra; Platte, Radka; Fineberg, Elena; Evans, Gareth; Lalloo, Fiona; Izatt, Louise; Eeles, Ros; Adlard, Julian; Davidson, Rosemarie; Cole, Trevor; Eccles, Diana; Cook, Jackie; Hodgson, Shirley; Brewer, Carole; Tischkowitz, Marc; Douglas, Fiona; Porteous, Mary; Side, Lucy; Walker, Lisa; Morrison, Patrick; Donaldson, Alan; Kennedy, John; Foo, Claire; Godwin, Andrew K.; Schmutzler, Rita Katharina; Wappenschmidt, Barbara; Rhiem, Kerstin; Engel, Christoph; Meindl, Alfons; Ditsch, Nina; Arnold, Norbert; Plendl, Hans Joerg; Niederacher, Dieter; Sutter, Christian; Wang-Gohrke, Shan; Steinemann, Doris; Preisler-Adams, Sabine; Kast, Karin; Varon-Mateeva, Raymonda; Gehrig, Andrea; Stoppa-Lyonnet, Dominique; Sinilnikova, Olga M.; Mazoyer, Sylvie; Damiola, Francesca; Poppe, Bruce; Claes, Kathleen; Piedmonte, Marion; Tucker, Kathy; Backes, Floor; Rodriguez, Gustavo; Brewster, Wendy; Wakeley, Katie; Rutherford, Thomas; Caldes, Trinidad; Nevanlinna, Heli; Aittomaki, Kristiina; Rookus, Matti A.; van Os, Theo A. M.; van der Kolk, Lizet; de Lange, J. L.; Meijers-Heijboer, Hanne E. J.; van der Hout, A. H.; van Asperen, Christi J.; Gomez Garcia, Encarna B.; Hoogerbrugge, Nicoline; Collee, J. Margriet; van Deurzen, Carolien H. M.; van der Luijt, Rob B.; Devilee, Peter; Olah, Edith; Lazaro, Conxi; Teule, Alex; Menendez, Mireia; Jakubowska, Anna; Cybulski, Cezary; Gronwald, Jacek; Lubinski, Jan; Durda, Katarzyna; Jaworska-Bieniek, Katarzyna; Johannsson, Oskar Th; Maugard, Christine; Montagna, Marco; Tognazzo, Silvia; Teixeira, Manuel R.; Healey, Sue; Olswold, Curtis; Guidugli, Lucia; Lindor, Noralane; Slager, Susan; Szabo, Csilla I.; Vijai, Joseph; Robson, Mark; Kauff, Noah; Zhang, Liying; Rau-Murthy, Rohini; Fink-Retter, Anneliese; Singer, Christian F.; Rappaport, Christine; Kaulich, Daphne Geschwantler; Pfeiler, Georg; Tea, Muy-Kheng; Berger, Andreas; Phelan, Catherine M.; Greene, Mark H.; Mai, Phuong L.; Lejbkowicz, Flavio; Andrulis, Irene; Mulligan, Anna Marie; Glendon, Gord; Toland, Amanda Ewart; Bojesen, Anders; Pedersen, Inge Sokilde; Sunde, Lone; Thomassen, Mads; Kruse, Torben A.; Jensen, Uffe Birk; Friedman, Eitan; Laitman, Yael; Shimon, Shani Paluch; Simard, Jacques; Easton, Douglas F.; Offit, Kenneth; Couch, Fergus J.; Chenevix-Trench, Georgia; Antoniou, Antonis C.; Benitez, Javier

    2014-01-01

    Single Nucleotide Polymorphisms (SNPs) in genes involved in the DNA Base Excision Repair (BER) pathway could be associated with cancer risk in carriers of mutations in the high-penetrance susceptibility genes BRCA1 and BRCA2, given the relation of synthetic lethality that exists between one of the c

  18. DNA Glycosylases Involved in Base Excision Repair May Be Associated with Cancer Risk in BRCA1 and BRCA2 Mutation Carriers

    NARCIS (Netherlands)

    Osorio, Ana; Milne, Roger L.; Kuchenbaecker, Karoline; Vaclova, Tereza; Pita, Guillermo; Alonso, Rosario; Peterlongo, Paolo; Blanco, Ignacio; de la Hoya, Miguel; Duran, Mercedes; Diez, Orland; Ramon y Cajal, Teresa; Konstantopoulou, Irene; Martinez-Bouzas, Cristina; Conejero, Raquel Andres; Soucy, Penny; McGuffog, Lesley; Barrowdale, Daniel; Lee, Andrew; Arver, Brita; Rantala, Johanna; Loman, Niklas; Ehrencrona, Hans; Olopade, Olufunmilayo I.; Beattie, Mary S.; Domchek, Susan M.; Nathanson, Katherine; Rebbeck, Timothy R.; Arun, Banu K.; Karlan, Beth Y.; Walsh, Christine; Lester, Jenny; John, Esther M.; Whittemore, Alice S.; Daly, Mary B.; Southey, Melissa; Hopper, John; Terry, Mary B.; Buys, Saundra S.; Janavicius, Ramunas; Dorfling, Cecilia M.; van Rensburg, Elizabeth J.; Steele, Linda; Neuhausen, Susan L.; Ding, Yuan Chun; Hansen, Thomas V. O.; Jonson, Lars; Ejlertsen, Bent; Gerdes, Anne-Marie; Infante, Mar; Herraez, Belen; Moreno, Leticia Thais; Weitzel, Jeffrey N.; Herzog, Josef; Weeman, Kisa; Manoukian, Siranoush; Peissel, Bernard; Zaffaroni, Daniela; Scuvera, Giulietta; Bonanni, Bernardo; Mariette, Frederique; Volorio, Sara; Viel, Alessandra; Varesco, Liliana; Papi, Laura; Ottini, Laura; Tibiletti, Maria Grazia; Radice, Paolo; Yannoukakos, Drakoulis; Garber, Judy; Ellis, Steve; Frost, Debra; Platte, Radka; Fineberg, Elena; Evans, Gareth; Lalloo, Fiona; Izatt, Louise; Eeles, Ros; Adlard, Julian; Davidson, Rosemarie; Cole, Trevor; Eccles, Diana; Cook, Jackie; Hodgson, Shirley; Brewer, Carole; Tischkowitz, Marc; Douglas, Fiona; Porteous, Mary; Side, Lucy; Walker, Lisa; Morrison, Patrick; Donaldson, Alan; Kennedy, John; Foo, Claire; Godwin, Andrew K.; Schmutzler, Rita Katharina; Wappenschmidt, Barbara; Rhiem, Kerstin; Engel, Christoph; Meindl, Alfons; Ditsch, Nina; Arnold, Norbert; Plendl, Hans Joerg; Niederacher, Dieter; Sutter, Christian; Wang-Gohrke, Shan; Steinemann, Doris; Preisler-Adams, Sabine; Kast, Karin; Varon-Mateeva, Raymonda; Gehrig, Andrea; Stoppa-Lyonnet, Dominique; Sinilnikova, Olga M.; Mazoyer, Sylvie; Damiola, Francesca; Poppe, Bruce; Claes, Kathleen; Piedmonte, Marion; Tucker, Kathy; Backes, Floor; Rodriguez, Gustavo; Brewster, Wendy; Wakeley, Katie; Rutherford, Thomas; Caldes, Trinidad; Nevanlinna, Heli; Aittomaki, Kristiina; Rookus, Matti A.; van Os, Theo A. M.; van der Kolk, Lizet; de Lange, J. L.; Meijers-Heijboer, Hanne E. J.; van der Hout, A. H.; van Asperen, Christi J.; Gomez Garcia, Encarna B.; Hoogerbrugge, Nicoline; Collee, J. Margriet; van Deurzen, Carolien H. M.; van der Luijt, Rob B.; Devilee, Peter; Olah, Edith; Lazaro, Conxi; Teule, Alex; Menendez, Mireia; Jakubowska, Anna; Cybulski, Cezary; Gronwald, Jacek; Lubinski, Jan; Durda, Katarzyna; Jaworska-Bieniek, Katarzyna; Johannsson, Oskar Th; Maugard, Christine; Montagna, Marco; Tognazzo, Silvia; Teixeira, Manuel R.; Healey, Sue; Olswold, Curtis; Guidugli, Lucia; Lindor, Noralane; Slager, Susan; Szabo, Csilla I.; Vijai, Joseph; Robson, Mark; Kauff, Noah; Zhang, Liying; Rau-Murthy, Rohini; Fink-Retter, Anneliese; Singer, Christian F.; Rappaport, Christine; Kaulich, Daphne Geschwantler; Pfeiler, Georg; Tea, Muy-Kheng; Berger, Andreas; Phelan, Catherine M.; Greene, Mark H.; Mai, Phuong L.; Lejbkowicz, Flavio; Andrulis, Irene; Mulligan, Anna Marie; Glendon, Gord; Toland, Amanda Ewart; Bojesen, Anders; Pedersen, Inge Sokilde; Sunde, Lone; Thomassen, Mads; Kruse, Torben A.; Jensen, Uffe Birk; Friedman, Eitan; Laitman, Yael; Shimon, Shani Paluch; Simard, Jacques; Easton, Douglas F.; Offit, Kenneth; Couch, Fergus J.; Chenevix-Trench, Georgia; Antoniou, Antonis C.; Benitez, Javier

    2014-01-01

    Single Nucleotide Polymorphisms (SNPs) in genes involved in the DNA Base Excision Repair (BER) pathway could be associated with cancer risk in carriers of mutations in the high-penetrance susceptibility genes BRCA1 and BRCA2, given the relation of synthetic lethality that exists between one of the c

  19. Nachrichtenberichterstattung über Terrorismus. Eine Analyse der TV-Nachrichten über die Terroranschläge in Kenia 2002

    Directory of Open Access Journals (Sweden)

    Nicole Haußecker

    2007-04-01

    Full Text Available Nach der starken Kritik der Medienberichterstattung über Terrorismus, besonders nach dem 11.09.2001, werden die theoretischen Hintergründe ausgewählter Kritikpunkte betrachtet und ein weiteres terroristisches Ereignis, die Anschläge in Kenia am 28.11.2002, inhaltsanalytisch untersucht. Ziel dabei ist es, Aussagen bezüglich inhaltlicher und formaler Merkmale der Fernseh-berichterstattung über ein terroristisches Ereignis zu treffen. Deshalb liegt der Fokus auf den folgenden drei Forschungsfragen: 1. Welche Nachrichtenfaktoren spielen für die Selektion und Intensität der Berichterstattung über das terroristische Ereignis eine Rolle? 2. Wird mit Emotionalisierung gearbeitet? 3. Liegen negative Stereotype und/oder Feindbilder bezüglich der islamischen und arabischen Welt vor? Die Ergebnisse der Untersuchung zeigen erwartete Tendenzen sowohl die Merkmale der Terrorismusberichterstattung als auch die Senderkonvergenzen und -divergenzen im dualen System betreffend. Der Nachrichtenwert eines terroristischen Ereignisses ist anfänglich sehr hoch, jedoch verliert das Ereignis ab dem dritten Tag aufgrund diverser Nachrichtenfaktoren deutlich an Beachtung in der Berichterstattung. Das Vorkommen emotionalisierender Mittel wird empirisch bestätigt. Nicht nur emotionale Sprache und Sprechweise, sondern vor allem Formen der expliziten Emotionalisierung sind vertreten. Damit wird die Vermutung bekräftigt, dass die Medien die mit den terroristischen Ereignissen verbundene beängstigende Stimmung senderabhängig unterschiedlich stark aufgreifen. Ein direkter islamischer Feindbildaufbau ist in der Berichterstattung nicht zu verzeichnen. Allerdings liegen latente negative Bewertungstendenzen sowie negative Stereotype bezüglich der arabischen und islamischen Welt vor, die das seit dem 11.09.2001 negativ geprägte Bild festigen. Die meist narrativ inszenierte Fixierung auf Bin Laden und al Qaida erfolgt oberflächlich und vernachlässigt m

  20. Research on complex networks' repairing characteristics due to cascading failure

    Science.gov (United States)

    Chaoqi, Fu; Ying, Wang; Xiaoyang, Wang

    2017-09-01

    In reality, most of the topological structures of complex networks are not ideal. Considering the restrictions from all aspects, we cannot timely adjust and improve network defects. Once complex networks collapse under cascading failure, an appropriate repair strategy must be implemented. This repair process is divided into 3 kinds of situations. Based on different types of opening times, we presented 2 repair modes, and researched 4 kinds of repair strategies. Results showed that network efficiency recovered faster when the repair strategies were arranged in descending order by parameters under the immediate opening condition. However, the risk of secondary failure and additional expansion capacity were large. On the contrary, when repair strategies were in ascending order, the demand for additional capacity caused by secondary failure was greatly saved, but the recovery of network efficiency was relatively slow. Compared to immediate opening, delayed opening alleviated the contradiction between network efficiency and additional expansion capacity, particularly to reduce the risk of secondary failure. Therefore, different repair methods have different repair characteristics. This paper investigates the impact of cascading effects on the network repair process, and by presenting a detailed description of the status of each repaired node, helps us understand the advantages and disadvantages of different repair strategies.

  1. Eye muscle repair - discharge

    Science.gov (United States)

    ... Lazy eye repair - discharge; Strabismus repair - discharge; Extraocular muscle surgery - discharge ... You or your child had eye muscle repair surgery to correct eye muscle ... term for crossed eyes is strabismus. Children most often ...

  2. Ventral hernia repair

    Science.gov (United States)

    ... page: //medlineplus.gov/ency/article/007661.htm Ventral hernia repair To use the sharing features on this page, please enable JavaScript. Ventral hernia repair is surgery to repair a ventral hernia. ...

  3. Brain aneurysm repair

    Science.gov (United States)

    ... aneurysm repair; Dissecting aneurysm repair; Endovascular aneurysm repair - brain; Subarachnoid hemorrhage - aneurysm ... Your scalp, skull, and the coverings of the brain are opened. A metal clip is placed at ...

  4. Measurement of DNA base and nucleotide excision repair activities in mammalian cells and tissues using the comet assay--a methodological overview.

    Science.gov (United States)

    Azqueta, Amaya; Langie, Sabine A S; Slyskova, Jana; Collins, Andrew R

    2013-11-01

    There is an increasing demand for phenotyping assays in the field of human functional genetics. DNA repair activity is representative of this functional approach, being seen as a valuable biomarker related to cancer risk. Repair activity is evaluated by incubating a cell extract with a DNA substrate containing lesions specific for the DNA repair pathway of interest. Enzymic incision at the lesion sites can be measured by means of the comet assay (single cell gel electrophoresis). The assay is particularly applicable for evaluation of base and nucleotide excision repair pathways (BER and NER). Substrate DNA containing oxidised purines gives a measure of BER, while UV-induced photolesions are the substrate for NER. While applications of comet-based DNA repair assays continue to increase, there are no commonly accepted standard protocols, which complicates inter-laboratory comparisons of results. Here we provide a comprehensive summary of protocols for the comet-based BER- and NER-specific in vitro DNA repair assays that can be applied to a wide spectrum of biological material--cultured cell lines, blood cells, animal tissue samples and human biopsies. Our intention is to provide a detailed and user-friendly account of the assays, including practical tips and recommendations to help in setting them up. By proposing standard protocols, we hope to facilitate comparison of results obtained in different laboratories.

  5. Relationships between chromatin remodeling and DNA damage repair induced by 8-methoxypsoralen and UVA in yeast Saccharomyces cerevisiae

    Directory of Open Access Journals (Sweden)

    Lavínia Almeida Cruz

    2012-01-01

    Full Text Available Eukaryotic cells have developed mechanisms to prevent genomic instability, such as DNA damage detection and repair, control of cell cycle progression and cell death induction. The bifunctional compound furocumarin 8-methoxy-psoralen (8-MOP is widely used in the treatment of various inflammatory skin diseases. In this review, we summarize recent data about the role of chromatin remodeling in the repair of DNA damage induced by treatment with 8-methoxypsoralen plus UVA (8-MOP+UVA, focusing on repair proteins in budding yeast Saccharomyces cerevisiae, an established model system for studying DNA repair pathways. The interstrand crosslinks (ICL formed by the 8-MOP+UVA treatment are detrimental lesions that can block transcription and replication, leading to cell death if not repaired. Current data show the involvement of different pathways in ICL processing, such as nucleotide excision repair (NER, base excision repair (BER, translesion repair (TLS and double-strand break repair. 8-MOP+UVA treatment in yeast enhances the expression of genes involved in the DNA damage response, double strand break repair by homologous replication, as well as genes related to cell cycle regulation. Moreover, alterations in the expression of subtelomeric genes and genes related to chromatin remodeling are consistent with structural modifications of chromatin relevant to DNA repair. Taken together, these findings indicate a specific profile in 8-MOP+UVA responses related to chromatin remodeling and DNA repair.

  6. Carrying Capacity

    DEFF Research Database (Denmark)

    Schroll, Henning; Andersen, Jan; Kjærgård, Bente

    2012-01-01

    A spatial planning act was introduced inIndonesia 1992 and renewed in 2008. It emphasised the planning role of decentralised authorities. The spatial planning act covers both spatial and environmental issues. It defines the concept of carrying capacity and includes definitions of supportive...... carrying capacity (SCC) and assimilative carrying capacity (ACC). The act mandates that the latter two aspects must be taken into consideration in the local spatial plans. The present study aimed at developing a background for a national guideline for carrying capacity in Indonesian provinces and districts...... standard or governmental political objective exists. In most cases it was possible to select a set of indicators, including thresholds that are workable in a carrying capacity planning at the local administrative levels. Not all relevant sectors at the decentralized level were included. Indicators of SCC...

  7. ρ(C)/ρ(N)对3 BER-S工艺特性及反硝化细菌群落特征的影响%Influence of ρ(C)/ρ(N) Ratio on Technology Characteristics and Denitrifying Bacteria Community for 3 BER-S

    Institute of Scientific and Technical Information of China (English)

    郝瑞霞; 任晓克; 孟成成; 王建超; 王润众; 赵文莉

    2015-01-01

    In order to improve the nitrogen removal efficiency of three-dimension-electrode biofilm process, the effects of ρ( C )/ρ( N ) on operation characteristics and denitrifying bacteria population community characteristics of a coupled 3-dimensional biofilm-electrode with sulfur autotrophic denitrification technology ( 3DBER-S ) were investigated at different ρ( C )/ρ( N ) conditions. The operating result indicates that there is no significant impact ofρ( C)/ρ( N) on denitrification performance in 3BER-S. And the TN removal efficiency is more than 80% at different ρ( C)/ρ( N) conditions. Moreover, the effects ofρ(C)/ρ(N) on denitrifying bacteria population and denitrification nutrition types in 3BER-S system were found. At high ρ( C)/ρ( N) condition, there is less species of denitrifying bacteria in 3BER-S system, where the Thauera acts as the dominant bacteria and heterotrophic denitrification is the main process. When the ρ( C )/ρ( N ) is reduced, both the denitrifying bacteria species and the proportion of sulfur autotrophic denitrification bacteria increase. In a word, the 3BER-S system maintains high and stable nitrogen removal efficiency at differentρ( C)/ρ( N) conditions, because the sulfur makes up for the deficiency of the denitrifying electronic donor in 3BER-S at low ρ(C)/ρ(N)condition.%为提高三维电极生物膜工艺脱氮效率,通过运行不同TOC与TN的质量浓度比(ρ( C)/ρ( N))条件下三维电极生物膜-硫自养耦合工艺(3BER-S),并建立基于反硝化特异性基因 nirS克隆文库,研究了ρ(C)/ρ(N)对3BER-S运行特性及反硝化细菌群落的影响。结果表明:ρ( C)/ρ( N)对3BER-S工艺的脱氮效率影响较小,不同ρ(C)/ρ(N)条件下的TN去除效率基本稳定在80%以上。ρ(C)/ρ(N)对3BER-S体系内的反硝化细菌种群结构和营养类型均有一定影响。高ρ(C)/ρ(N)条件下,反硝化细菌种类较少,Thauera(陶厄氏菌属)是体系内的优势菌群,脱氮作用以异养

  8. Anthropologie des Gedenkens: Beobachtungen zu und Reflektionen über amerikanische Todesrituale

    OpenAIRE

    Hemmingson, Michael

    2009-01-01

    Dieser Beitrag befasst sich mit zeitgenössischen amerikanischen Todesritualen, konkreter mit der Kultur des Gedenkens. Hierzu greife ich auf den Vorschlag von David R. MAINES zurück, Erzählungen zu verwenden, um soziale (und für die Anthropologie relevante) Ereignisse zu untersuchen. In Bezug auf Gedenken und Gedenkstätten gibt es spezifische soziale Erwartungen, es gibt Rituale, über Tote nur Gutes zu berichten, Rituale von Trauer. Bekannte und Familienangehörige kommen zusammen und sprec...

  9. Étude critique du doublage des films de Francis Véber en espagnol

    OpenAIRE

    Scarampi, Patricia

    2004-01-01

    Francis Véber, conocido hoy en día como director de cine, empezó en el mundo del cine siendo guionista. En sus películas, es fácil darse cuenta de que todo el peso de la comedia recae en la particularidad de los diálogos con sus juegos de palabras, sus marcas culturales y su humor imposible de traducir algunas veces. ¿Qué ocurre entonces cuando algunos de estos aspectos se pierden en la traducción? Para que el espectador pueda recibir de la versión doblada el mensaje que ...

  10. Bistable soliton states and switching in doubly inhomogeneously doped fiber couplers

    Indian Academy of Sciences (India)

    Ajit Kumar

    2001-11-01

    Switching between the bistable soliton states in a doubly and inhomogeneously doped fiber system is studied numerically. Both the cases of lossless as well as lossy couplers are considered. It is shown that both up-switching (from the low state to the high state) and down-switching (from the high state to the low state) of solitons between bistable states are realizable, if the amplification of the input soliton for up-switching and the extraction of energy from it for down-switching are suitably adjusted.

  11. Blinde Mimesis. Über Ordo und Kontingenz in der literaturgeschichtlichen Traditionsbildung (Horaz und Petron

    Directory of Open Access Journals (Sweden)

    Jürgen Paul Schwindt

    2010-11-01

    Full Text Available me truncus illapsus cerebro / sustulerat, nisi Faunus ictum / dextra levasset, Mercurialium / custos virorum.(Hor. carm. 2, 17, 27–30... et ipse Trimalchio capillatus caduceum tenebat Minervaque ducente Romam intrabat.(Petron. 29, 3Es ist zuweilen das Schicksal besonders gut erforschter Texte, daß sie im System der Bezüge, der Quellen und Verweise, das die gelehrte Erklärung über, neben und unter ihnen errichtet hat (Hyper-, Para-, Prae- oder Subtext, zu verschwimmen, konturlos zu werden, ...

  12. A survey of BER Performance of Generalized MC DS-CDMA System

    Directory of Open Access Journals (Sweden)

    Rishi Choubey

    2013-06-01

    Full Text Available In today’s era multiple access interference in multicarrier direct sequence-code division multiple access (MC DS-CDMA is the most important difficulty that depends mainly on the correlation properties of the spreading sequences as well as the shape of the chip waveforms. In this paper we present a survey on BER performance of generalized MC DS-CDMA. We study and analysed the performance measurement with their advantages and limitations. Based on study we also suggest some future suggestions which are useful for future research.

  13. BER analysis of DS-UWB system employing a laplace distribution model

    KAUST Repository

    Mehbodniya, Abolfazl

    2011-01-01

    This letter takes a new approach to extract a closed-form expression for the bit error rate (BER) of direct-sequence ultra wideband (DS-UWB) system. In the analysis, the main signal is impaired by multi-user interference (MUI) and an external source of interference originated by simultanously transmitting multiband orthogonal frequency division multiplexing (MB-OFDM) systems which are located in the vicinity of the DS-UWB receiver. All the transmission channels are affected by Nakagami-m fading. A Laplacian distribution is considered for MUI to comply more with real statistical behaviors of this kind of interference. © IEICE 2011.

  14. Outage and BER analysis for ultrawideband-based WPAN in Nakagami-m fading channels

    KAUST Repository

    Mehbodniya, Abolfazl

    2011-09-01

    This paper presents a performance analysis of multiband orthogonal frequency-division multiplexing (MB-OFDM) in ultra wideband (UWB)-based personal area networks (UPANs). A UPAN consists of devices with different UWB technologies at the physical layer. Approximate expressions for the outage probability and average bit error rate (BER) are derived in closed form for the MB-OFDM target receiver, taking into account multi-user interference (MUI), as well as external interference in the form of time-hopping (TH) and direct-sequence (DS) UWB signals. © 2010 IEEE.

  15. Base excision repair efficiency and mechanism in nuclear extracts are influenced by the ratio between volume of nuclear extraction buffer and nuclei-Implications for comparative studies

    DEFF Research Database (Denmark)

    Akbari, Mansour; Krokan, Hans E

    2012-01-01

    using purified proteins essentially mirror properties of the proteins used, and does not necessarily reflect the mechanism as it occurs in the cell. Nuclear extracts from cultured cells have the capacity to carry out complete BER and can give important information on the mechanism. Furthermore......, candidate proteins in extracts can be inhibited or depleted in a controlled way, making defined extracts an important source for mechanistic studies. The major drawback is that there is no standardized method of preparing nuclear extract for BER studies, and it does not appear to be a topic given much...... attention. Here we have examined BER activity of nuclear cell extracts from HeLa cells, using as substrate a circular DNA molecule with either uracil or an AP-site in a defined position. We show that BER activity of nuclear extracts from the same batch of cells varies inversely with the volume of nuclear...

  16. Polymorphism of the DNA Base Excision Repair Genes in Keratoconus

    Directory of Open Access Journals (Sweden)

    Katarzyna A. Wojcik

    2014-10-01

    Full Text Available Keratoconus (KC is a degenerative corneal disorder for which the exact pathogenesis is not yet known. Oxidative stress is reported to be associated with this disease. The stress may damage corneal biomolecules, including DNA, and such damage is primarily removed by base excision repair (BER. Variation in genes encoding BER components may influence the effectiveness of corneal cells to cope with oxidative stress. In the present work we genotyped 5 polymorphisms of 4 BER genes in 284 patients and 353 controls. The A/A genotype of the c.–1370T>A polymorphism of the DNA polymerase γ (POLG gene was associated with increased occurrence of KC, while the A/T genotype was associated with decreased occurrence of KC. The A/G genotype and the A allele of the c.1196A>G polymorphism of the X-ray repair cross-complementing group 1 (XRCC1 were associated with increased, and the G/G genotype and the G allele, with decreased KC occurrence. Also, the C/T and T as well as C/C genotypes and alleles of the c.580C>T polymorphism of the same gene displayed relationship with KC occurrence. Neither the g.46438521G>C polymorphism of the Nei endonuclease VIII-like 1 (NEIL1 nor the c.2285T>C polymorphism of the poly(ADP-ribose polymerase-1 (PARP-1 was associated with KC. In conclusion, the variability of the XRCC1 and POLG genes may play a role in KC pathogenesis and determine the risk of this disease.

  17. Carrying Capacity

    DEFF Research Database (Denmark)

    Schroll, Henning; Andersen, Jan; Kjærgård, Bente

    2012-01-01

    A spatial planning act was introduced inIndonesia 1992 and renewed in 2008. It emphasised the planning role of decentralised authorities. The spatial planning act covers both spatial and environmental issues. It defines the concept of carrying capacity and includes definitions of supportive...... and ACC may increase the political focus on resources and environmental issues and may help to move local authorities towards a more holistic spatial planning approach. A carrying capacity approach could be an inspiration for local spatial planning in developing countries. A spatial planning act...... was introduced inIndonesia 1992 and renewed in 2008. It emphasised the planning role of decentralised authorities. The spatial planning act covers both spatial and environmental issues. It defines the concept of carrying capacity and includes definitions of supportive carrying capacity (SCC) and assimilative...

  18. DNA repair. [UV radiation

    Energy Technology Data Exchange (ETDEWEB)

    Setlow, R.

    1978-01-01

    Some topics discussed are as follows: difficulty in extrapolating data from E. coli to mammalian systems; mutations caused by UV-induced changes in DNA; mutants deficient in excision repair; other postreplication mechanisms; kinds of excision repair systems; detection of repair by biochemical or biophysical means; human mutants deficient in repair; mutagenic effects of UV on XP cells; and detection of UV-repair defects among XP individuals. (HLW)

  19. Characterization of oxidative guanine damage and repair in mammalian telomeres.

    Directory of Open Access Journals (Sweden)

    Zhilong Wang

    2010-05-01

    Full Text Available 8-oxo-7,8-dihydroguanine (8-oxoG and 2,6-diamino-4-hydroxy-5-formamidopyrimidine (FapyG are among the most common oxidative DNA lesions and are substrates for 8-oxoguanine DNA glycosylase (OGG1-initiated DNA base excision repair (BER. Mammalian telomeres consist of triple guanine repeats and are subject to oxidative guanine damage. Here, we investigated the impact of oxidative guanine damage and its repair by OGG1 on telomere integrity in mice. The mouse cells were analyzed for telomere integrity by telomere quantitative fluorescence in situ hybridization (telomere-FISH, by chromosome orientation-FISH (CO-FISH, and by indirect immunofluorescence in combination with telomere-FISH and for oxidative base lesions by Fpg-incision/Southern blot assay. In comparison to the wild type, telomere lengthening was observed in Ogg1 null (Ogg1(-/- mouse tissues and primary embryonic fibroblasts (MEFs cultivated in hypoxia condition (3% oxygen, whereas telomere shortening was detected in Ogg1(-/- mouse hematopoietic cells and primary MEFs cultivated in normoxia condition (20% oxygen or in the presence of an oxidant. In addition, telomere length abnormalities were accompanied by altered telomere sister chromatid exchanges, increased telomere single- and double-strand breaks, and preferential telomere lagging- or G-strand losses in Ogg1(-/- mouse cells. Oxidative guanine lesions were increased in telomeres in Ogg1(-/- mice with aging and primary MEFs cultivated in 20% oxygen. Furthermore, oxidative guanine lesions persisted at high level in Ogg1(-/- MEFs after acute exposure to hydrogen peroxide, while they rapidly returned to basal level in wild-type MEFs. These findings indicate that oxidative guanine damage can arise in telomeres where it affects length homeostasis, recombination, DNA replication, and DNA breakage repair. Our studies demonstrate that BER pathway is required in repairing oxidative guanine damage in telomeres and maintaining telomere integrity

  20. Improving 3D-Turbo Code's BER Performance with a BICM System over Rayleigh Fading Channel

    Directory of Open Access Journals (Sweden)

    R. Yao

    2016-12-01

    Full Text Available Classical Turbo code suffers from high error floor due to its small Minimum Hamming Distance (MHD. Newly-proposed 3D-Turbo code can effectively increase the MHD and achieve a lower error floor by adding a rate-1 post encoder. In 3D-Turbo codes, part of the parity bits from the classical Turbo encoder are further encoded through the post encoder. In this paper, a novel Bit-Interleaved Coded Modulation (BICM system is proposed by combining rotated mapping Quadrature Amplitude Modulation (QAM and 3D-Turbo code to improve the Bit Error Rate (BER performance of 3D-Turbo code over Raleigh fading channel. A key-bit protection scheme and a Two-Dimension (2D iterative soft demodulating-decoding algorithm are developed for the proposed BICM system. Simulation results show that the proposed system can obtain about 0.8-1.0 dB gain at BER of 10^{-6}, compared with the existing BICM system with Gray mapping QAM.

  1. LDPC Decoder with an Adaptive Wordwidth Datapath for Energy and BER Co-Optimization

    Directory of Open Access Journals (Sweden)

    Tinoosh Mohsenin

    2013-01-01

    (LDPC decoder using an adaptive wordwidth datapath is presented. The decoder switches between a Normal Mode and a reduced wordwidth Low Power Mode. Signal toggling is reduced as variable node processing inputs change in fewer bits. The duration of time that the decoder stays in a given mode is optimized for power and BER requirements and the received SNR. The paper explores different Low Power Mode algorithms to reduce the wordwidth and their implementations. Analysis of the BER performance and power consumption from fixed-point numerical and post-layout power simulations, respectively, is presented for a full parallel 10GBASE-T LDPC decoder in 65 nm CMOS. A 5.10 mm2 low power decoder implementation achieves 85.7 Gbps while operating at 185 MHz and dissipates 16.4 pJ/bit at 1.3 V with early termination. At 0.6 V the decoder throughput is 9.3 Gbps (greater than 6.4 Gbps required for 10GBASE-T while dissipating an average power of 31 mW. This is 4.6 lower than the state of the art reported power with an SNR loss of 0.35 dB at .

  2. Analysis of BER of OFDM in Optical Domain with Different Modulation Techniques

    Directory of Open Access Journals (Sweden)

    A. R. Gifty Arul Marin

    2013-01-01

    Full Text Available In OFDM system, the subcarrier frequencies are chosen so that the subcarriers are orthogonal to each other, meaning that cross talk between the sub channels is eliminated. Priority of OFDM system is given to minimizing the interference or crosstalk among the channels and symbols comprising the data stream. The primary advantage of OFDM is its ability to cope with severe channel conditions like attenuation of high frequencies, narrowband interference and frequency selective fading due to multipath. The existing OFDM systems were modelled based on frequency domain using various modulation techniques in AWGN channel. This is a research analysis to calculate the efficient BER of the OFDM system in the optical domain using BPSK and QPSK modulation techniques. This project can be used for high speed applications requiring more band width. Finally, performance comparison of BPSK and QPSK modulation schemes in OFDM system and the calculation of BER (Bit Error Rate using these modulation techniques is to be done. The entire OFDM system is implemented using SIMULINK tool in MATLAB

  3. Radiation- and drug-induced DNA repair in mammalian oocytes and embryos

    Energy Technology Data Exchange (ETDEWEB)

    Pedersen, R A; Brandriff, B

    1979-01-01

    A review of studies showing ultraviolet- or drug-induced unscheduled DNA synthesis in mammalian oocytes and embryos suggests that the female gamete has an excision repair capacity from the earliest stages of oocyte growth. The oocyte's demonstrable excision repair capacity decreases at the time of meiotic maturation for unknown reasons, but the fully mature oocyte maintans a repair capacity, in contrast to the mature sperm, and contributes this to the zygote. Early embryo cells maintain relatively constant levels of excision repair until late fetal stages, when they lose their capacity for excision repair. These apparent changes in excision repair capacity do not have a simple relationship to known differences in radiation sensitivity of germ cells and embryos.

  4. Capacitated two-echelon inventory models for repairable item systems

    NARCIS (Netherlands)

    Avsar, Z.M.; Zijm, Willem H.M.; Gershwin, S.B.; Dallery, Y.; Papadopoulos, C.; Smith, J.M.

    2002-01-01

    In this paper, we consider two-echelon maintenance systems with repair facilities both at a number of local service centers (called bases) and at a central location. Each repair facility may be considered to be a job shop and is modeled as a (limited capacity) open queuing network, while any

  5. Obstetric fistulae repair in a Nigerian Tertiary Health Institution ...

    African Journals Online (AJOL)

    Gynaecologists performed 61.7% of cases using the vaginal route while ... Bivariate analysis showed that younger age at presentation, gravidity, VVF type ... It is recommended that early presentation for repair and capacity building of specialist ...

  6. Effects of post mortem interval and gender in DNA base excision repair activities in rat brains

    Energy Technology Data Exchange (ETDEWEB)

    Soltys, Daniela Tathiana; Pereira, Carolina Parga Martins; Ishibe, Gabriela Naomi; Souza-Pinto, Nadja Cristhina de, E-mail: nadja@iq.usp.br

    2015-06-15

    Most human tissues used in research are of post mortem origin. This is the case for all brain samples, and due to the difficulty in obtaining a good number of samples, especially in the case of neurodegenerative diseases, male and female samples are often included in the same experimental group. However, the effects of post mortem interval (PMI) and gender differences in the endpoints being analyzed are not always fully understood, as is the case for DNA repair activities. To investigate these effects, in a controlled genetic background, base excision repair (BER) activities were measured in protein extracts obtained from Wistar rat brains from different genders and defined PMI up to 24 hours, using a novel fluorescent-based in vitro incision assay. Uracil and AP-site incision activity in nuclear and mitochondrial extracts were similar in all groups included in this study. Our results show that gender and PMI up to 24 hours have no influence in the activities of the BER proteins UDG and APE1 in rat brains. These findings demonstrate that these variables do not interfere on the BER activities included in these study, and provide a security window to work with UDG and APE1 proteins in samples of post mortem origin.

  7. DNA repair genes in the Megavirales pangenome.

    Science.gov (United States)

    Blanc-Mathieu, Romain; Ogata, Hiroyuki

    2016-06-01

    The order 'Megavirales' represents a group of eukaryotic viruses with a large genome encoding a few hundred up to two thousand five hundred genes. Several members of Megavirales possess genes involved in major DNA repair pathways. Some of these genes were likely inherited from an ancient virus world and some others were derived from the genomes of their hosts. Here we examine molecular phylogenies of key DNA repair enzymes in light of recent hypotheses on the origin of Megavirales, and propose that the last common ancestors of the individual families of the order Megavirales already possessed DNA repair functions to achieve and maintain a moderately large genome and that this repair capacity gradually increased, in a family-dependent manner, during their recent evolution.

  8. Orale Kontrazeptiva: Hohe Sicherheit unter Berücksichtigung diverser Wechselwirkungen

    Directory of Open Access Journals (Sweden)

    Gruber ChJ

    2001-01-01

    Full Text Available Die Anfänge der Kontrazeption und Familienplanung reichen fast bis an die Anfänge der Menschheitsgeschichte zurück. Viele altertümliche, medizinische Dokumente geben uns über die Entwicklung der Kontrazeption Auskunft. Von einem gewissen Zeitpunkt an hatte man herausgefunden, daß die Ejakulation des Mannes in unmittelbarem Zusammenhang mit dem Zeugen von Kindern stand. Daher beschränkte sich die Kontrazeption auf Maßnahmen, die verhinderten, daß das Ejakulat weiter in die Vagina vordringen konnte. Die allerersten Aufzeichnungen über Pessare findet man im alten Ägypten im Jahre 1850 a.C. Sie wurden aus dem Kot von Elefanten oder Krokodilen hergestellt, vermischt mit Honig, Teebaumöl und Schwefel. Es ist erstaunlich, wieviele dieser Methoden doch einen biologischen Sinn gemacht haben. Ein solches Beispiel wäre die Einführung einer halben Zitrone in die obere Vagina, um die Zervix zu bedecken. Es handelt sich dabei nicht nur um eine Barriere, sondern heute ist bekannt, daß die Zitronensäure spermizid wirkt. Auch die Geschichte der Kondome reicht schon sehr weit zurück. Man verwendete Harnblasen von verschiedensten Tieren oder auch das Caecum von Schafen. Viele kontrazeptive Versuche endeten jedoch tragisch, wie das Schlucken von Arsen, Blei oder Strychnin oder die Anwendung von Gewalt auf das Abdomen der Frauen, um das Kind und alle Organe, die für die Schwangerschaft nötig sind, zu zerstören. In der modernen Zeit hat das ständig akkumulierende Wissen über die Funktion des männlichen und weiblichen Genitaltraktes, sowie das zunehmende Verständnis der molekularen und physiologischen Mechanismen des weiblichen Zyklus dazu geführt, sehr verträgliche und effiziente Formen der Kontrazeption zu entwickeln. Den größten Beitrag hierbei leistete wohl Carl Djerassi, der "Erfinder" der Antibabypille.

  9. Removal of uracil by uracil DNA glycosylase limits pemetrexed cytotoxicity: overriding the limit with methoxyamine to inhibit base excision repair

    Science.gov (United States)

    Bulgar, A D; Weeks, L D; Miao, Y; Yang, S; Xu, Y; Guo, C; Markowitz, S; Oleinick, N; Gerson, S L; Liu, L

    2012-01-01

    Uracil DNA glycosylase (UDG) specifically removes uracil bases from DNA, and its repair activity determines the sensitivity of the cell to anticancer agents that are capable of introducing uracil into DNA. In the present study, the participation of UDG in the response to pemetrexed-induced incorporation of uracil into DNA was studied using isogenic human tumor cell lines with or without UDG (UDG+/+/UDG−/−). UDG−/− cells were very sensitive to pemetrexed. Cell killing by pemetrexed was associated with genomic uracil accumulation, stalled DNA replication, and catastrophic DNA strand breaks. By contrast, UDG+/+ cells were >10 times more resistant to pemetrexed due to the rapid removal of uracil from DNA by UDG and subsequent repair of the resultant AP sites (abasic sites) via the base excision repair (BER). The resistance to pemetrexed in UDG+/+ cells could be reversed by the addition of methoxyamine (MX), which binds to AP sites and interrupts BER pathway. Furthermore, MX-bound AP sites induced cell death was related to their cytotoxic effect of dual inactivation of UDG and topoisomerase IIα, two genes that are highly expressed in lung cancer cells in comparison with normal cells. Thus, targeting BER-based therapy exhibits more selective cytotoxicity on cancer cells through a synthetic lethal mechanism. PMID:22237209

  10. Genetic polymorphisms of DNA repair genes and chromosomal damage in workers exposed to 1,3-butadiene.

    Science.gov (United States)

    Wang, Qi; Wang, Ai-hong; Tan, Hong-shan; Feng, Nan-nan; Ye, Yun-jie; Feng, Xiao-qing; Liu, Geoffrey; Zheng, Yu-xin; Xia, Zhao-lin

    2010-05-01

    The base excision repair (BER) pathway is important in repairing DNA damage incurred from occupational exposure to 1,3-butadiene (BD). This study examines the relationship between inherited polymorphisms of the BER pathway (x-ray repair cross-complementing group 1 (XRCC1) Arg194Trp, Arg280His, Arg399Gln, T-77C, ADPRT Val762Ala, MGMT Leu84Phe and APE1 Asp148Glu) and chromosomal damage in BD-exposed workers, using the cytokinesis-blocked (CB) micronucleus (MN) assay in peripheral lymphocytes of 166 workers occupationally exposed to BD and 41 non-exposed healthy individuals. The MN frequency of exposed workers (3.39 +/- 2.42) per thousand was higher than that of the non-exposed groups (1.48 +/- 1.26) per thousand (P damage among BD-exposed workers. In workers exposed to BD, multiple BER polymorphisms and a XRCC1 haplotype were associated with differential levels of chromosome damage.

  11. Hand function after nerve repair.

    Science.gov (United States)

    Lundborg, G; Rosén, B

    2007-02-01

    Treatment of injuries to major nerve trunks in the hand and upper extremity remains a major and challenging reconstructive problem. Such injuries may cause long-lasting disabilities in terms of lost fine sensory and motor functions. Nowadays there is no surgical repair technique that can ensure recovery of tactile discrimination in the hand of an adult patient following nerve repair while very young individuals usually regain a complete recovery of functional sensibility. Post-traumatic nerve regeneration is a complex biological process where the outcome depends on multiple biological and environmental factors such as survival of nerve cells, axonal regeneration rate, extent of axonal misdirection, type of injury, type of nerve, level of the lesion, age of the patient and compliance to training. A major problem is the cortical functional reorganization of hand representation which occurs as a result of axonal misdirection. Although protective sensibility usually occurs following nerve repair, tactile discriminative functions seldom recover--a direct result of cortical remapping. Sensory re-education programmes are routinely applied to facilitate understanding of the new sensory patterns provided by the hand. New trends in hand rehabilitation focus on modulation of central nervous processes rather than peripheral factors. Principles are being evolved to maintain the cortical hand representation by using the brain capacity for visuo-tactile and audio-tactile interaction for the initial phase following nerve injury and repair (phase 1). After the start of the re-innervation of the hand (phase 2), selective de-afferentation, such as cutaneous anaesthesia of the forearm of the injured hand, allows expansion of the nerve-injured cortical hand representation, thereby enhancing the effects of sensory relearning. Recent data support the view that training protocols specifically addressing the relearning process substantially increase the possibilities for improved

  12. On-bead fluorescent DNA nanoprobes to analyze base excision repair activities

    Energy Technology Data Exchange (ETDEWEB)

    Gines, Guillaume; Saint-Pierre, Christine; Gasparutto, Didier, E-mail: didier.gasparutto@cea.fr

    2014-02-17

    Graphical abstract: -- Highlights: •On magnetic beads fluorescent enzymatic assays. •Simple, easy, non-radioactive and electrophoresis-free functional assay. •Lesion-containing hairpin DNA probes are selective for repair enzymes. •The biosensing platform allows the measurement of DNA repair activities from purified enzymes or within cell free extracts. -- Abstract: DNA integrity is constantly threatened by endogenous and exogenous agents that can modify its physical and chemical structure. Changes in DNA sequence can cause mutations sparked by some genetic diseases or cancers. Organisms have developed efficient defense mechanisms able to specifically repair each kind of lesion (alkylation, oxidation, single or double strand break, mismatch, etc). Here we report the adjustment of an original assay to detect enzymes’ activity of base excision repair (BER), that supports a set of lesions including abasic sites, alkylation, oxidation or deamination products of bases. The biosensor is characterized by a set of fluorescent hairpin-shaped nucleic acid probes supported on magnetic beads, each containing a selective lesion targeting a specific BER enzyme. We have studied the DNA glycosylase alkyl-adenine glycosylase (AAG) and the human AP-endonuclease (APE1) by incorporating within the DNA probe a hypoxanthine lesion or an abasic site analog (tetrahydrofuran), respectively. Enzymatic repair activity induces the formation of a nick in the damaged strand, leading to probe's break, that is detected in the supernatant by fluorescence. The functional assay allows the measurement of DNA repair activities from purified enzymes or in cell-free extracts in a fast, specific, quantitative and sensitive way, using only 1 pmol of probe for a test. We recorded a detection limit of 1 μg mL{sup −1} and 50 μg mL{sup −1} of HeLa nuclear extracts for APE1 and AAG enzymes, respectively. Finally, the on-bead assay should be useful to screen inhibitors of DNA repair

  13. Upper Bounds on the BER Performance of MTCM-STBC Schemes over Shadowed Rician Fading Channels

    Directory of Open Access Journals (Sweden)

    M. Uysal

    2004-08-01

    Full Text Available Space-time block coding (STBC provides substantial diversity advantages with a low decoding complexity. However, these codes are not designed to achieve coding gains. Outer codes should be concatenated with STBC to provide additional coding gain. In this paper, we analyze the performance of concatenated trellis-coded STBC schemes over shadowed Rician frequency-flat fading channels. We derive an exact pairwise error probability (PEP expression that reveals the dominant factors affecting performance. Based on the derived PEP, in conjunction with the transfer function technique, we also present upper bounds on the bit error rate (BER, which are further shown to be tight through a Monte-Carlo simulation study.

  14. BER Performance for Downlink MC-CDMA Systems over Rician Fading Channels

    Directory of Open Access Journals (Sweden)

    Vimal K. Dubey

    2005-04-01

    Full Text Available We consider downlink multicarrier code-division multiple-access (MC-CDMA systems using binary phase-shift keying (BPSK modulation scheme and maximal ratio combining (MRC in frequency-selective Rician fading channels. A time-domain method to obtain bit error rate (BER by calculating moment generating function (MGF of the decision variable for a tapped-delay-line channel model is proposed. This method does not require any assumption regarding the statistical or spectral distribution of multiple access interference (MAI, and it is also not necessary to assume that the fading encountered by the subcarriers is independent of each other. The analytical formula is also verified by simulations.

  15. Über die Verknüpfung von Hörspiel und Pädagogik

    Directory of Open Access Journals (Sweden)

    Leah Lobensommer

    2013-09-01

    Full Text Available Dieser Artikel legt die Ergebnisse einer Bachelorarbeit zum Thema „Hörspiel als Lernmethode unter besonderer Berücksichtigung sonderpädagogischer Aspekte“ dar. Die Beziehung von Hörspiel und Pädagogik wird durchleuchtet und zeitgemäße Ansätze zur Verwirklichung eines Hörspielprojektes mit Jugendlichen werden dargestellt. Mit Hilfe der Aussagen der qualitativen Forschung wird ein Fazit und ein Ausblick in die Zukunft gewagt.The following article focuses on the results of a Bachelor’s thesis on the subject of "Radio drama as a learning method in supportive educational settings". The link between pedagogics and radio drama and contemporary efforts to create radio dramas in class will be shown. The statements obtained by empiric research have the goal to transport insights of radio drama professionals in order to enlighten the subject. Finally, on the basis of the gained knowledge a conclusion will be made.

  16. Hybridverfahren zur EMV-Analyse elektrischer Leitungen über geschlitztem Grund

    Science.gov (United States)

    Ter Haseborg, J. R.; Brüns, H.-D.; Singer, H.

    2006-09-01

    Die Betrachtung niedrig geführter elektrischer Leitungen über leitendem Grund stellt besondere Anforderungen an die numerische Feldanalyse. Insbesondere für Fälle ungleichförmiger Leitungsführung oder ungleichförmigen Grunds werden Verfahren benötigt, die eine effektive EMV-Analyse zulassen. Die Verwendung von volldiskretisierten Modellen erfordert aufwändige Diskretisierungen, große Ressourcen und hohe Rechenzeiten. Daher werden Möglichkeiten gesucht, die effektive Leitungstheorie auf Anordnungen anzuwenden, deren direkte Berechnung in klassischer Betrachtungsweise nicht möglich ist. In der vorliegenden Arbeit wird ein Hybridverfahren vorgestellt, um den Einfluss von Schlitzen unterhalb von Leitungen in einer approximativen EMV-Analyse zu untersuchen. Hierzu dient neben der Leitungstheorie zur Berechnung des Leiterstroms eine momententheoretische Simulation auf Basis von magnetischen Linienströmen.

  17. Hybridverfahren zur EMV-Analyse elektrischer Leitungen über geschlitztem Grund

    Directory of Open Access Journals (Sweden)

    J. R. ter Haseborg

    2006-01-01

    Full Text Available Die Betrachtung niedrig geführter elektrischer Leitungen über leitendem Grund stellt besondere Anforderungen an die numerische Feldanalyse. Insbesondere für Fälle ungleichförmiger Leitungsführung oder ungleichförmigen Grunds werden Verfahren benötigt, die eine effektive EMV-Analyse zulassen. Die Verwendung von volldiskretisierten Modellen erfordert aufwändige Diskretisierungen, große Ressourcen und hohe Rechenzeiten. Daher werden Möglichkeiten gesucht, die effektive Leitungstheorie auf Anordnungen anzuwenden, deren direkte Berechnung in klassischer Betrachtungsweise nicht möglich ist. In der vorliegenden Arbeit wird ein Hybridverfahren vorgestellt, um den Einfluss von Schlitzen unterhalb von Leitungen in einer approximativen EMV-Analyse zu untersuchen. Hierzu dient neben der Leitungstheorie zur Berechnung des Leiterstroms eine momententheoretische Simulation auf Basis von magnetischen Linienströmen.

  18. Relevance Vector Machines for Enhanced BER Probability in DMT-Based Systems

    Directory of Open Access Journals (Sweden)

    Ashraf A. Tahat

    2010-01-01

    Full Text Available A new channel estimation method for discrete multitone (DMT communication system based on sparse Bayesian learning relevance vector machine (RVM method is presented. The Bayesian frame work is used to obtain sparse solutions for regression tasks with linear models. By exploiting a probabilistic Bayesian learning framework, sparse Bayesian learning provides accurate models for estimation and consequently equalization. We consider frequency domain equalization (FEQ using the proposed channel estimate at both the transmitter (preequalization and receiver (postequalization and compare the resulting bit error rate (BER performance curves for both approaches and various channel estimation techniques. Simulation results show that the proposed RVM-based method is superior to the traditional least squares technique.

  19. Pectus excavatum repair

    Science.gov (United States)

    ... this page: //medlineplus.gov/ency/article/002949.htm Pectus excavatum repair To use the sharing features on this page, please enable JavaScript. Pectus excavatum repair is surgery to correct pectus excavatum . This ...

  20. Mediennutzung und Informationsbeschaffung über Studium- bzw. Berufswahl - Ingenieurberufe in den Medien

    Directory of Open Access Journals (Sweden)

    Amina Ovcina Cajacob

    2014-06-01

    Full Text Available Diese Publikation basiert auf der Befragung von 4 125 Jugendlichen (SchülerInnen der Altersgruppe 12 bis 21 Jahre. Dafür wurden im Zeitraum vom 22. Oktober bis 12. November 2013 Jugendliche befragt, um Antworten auf folgenden Fragen zu bekommen: Welches Bild haben die Schüler vom Ingenieurberuf? Wie ist ihr allgemeines Mediennutzungsverhalten und wie beeinflussen Medien das Bild des Ingenieurs? Welche Berufe interessieren Jugendliche und wie informieren sie sich über Studien- bzw. Berufswahl? Welche Einflüsse spielen bei den Jugendlichen bezüglich der eigenen Berufs- und Studienwahl eine Rolle? Die Ergebnisse dieser umfassenden Analyse sind Grundlage für die Konzeption einer crossmedialen Sensibilisierungskampage, die zum Ziel hat, Vorurteile über den Ingenieurberuf abzubauen, Wissen und ein zeitgemässes Berufsbild zu vermitteln sowie Neugier auf ein Ingenieurstudium zu wecken. This publication is based on a survey of 4125 young people (pupils and students aged 12 to 21 years. In the period from October 22 to November 12, 2013 young people were interviewed to obtain answers to the following questions: . What an idea do young people have about an engineer and his profession? . What is their general media usage behavior? . How do media influence the image of the engineer? . Which professions are the most attractive for young people and how do they inform themselves about study or career choices? . Which influences are important for the study and career choice of young people? The results of this comprehensive analysis are the basis for the conception of a cross-media awareness campaign, which aims to reduce prejudices about the engineering profession, to impart knowledge as well as a contemporary professional image of engineer and to arouse interest for an engineering degree.

  1. Stoichiometry of base excision repair proteins correlates with increased somatic CAG instability in striatum over cerebellum in Huntington's disease transgenic mice.

    Science.gov (United States)

    Goula, Agathi-Vassiliki; Berquist, Brian R; Wilson, David M; Wheeler, Vanessa C; Trottier, Yvon; Merienne, Karine

    2009-12-01

    Huntington's disease (HD) is a progressive neurodegenerative disorder caused by expansion of an unstable CAG repeat in the coding sequence of the Huntingtin (HTT) gene. Instability affects both germline and somatic cells. Somatic instability increases with age and is tissue-specific. In particular, the CAG repeat sequence in the striatum, the brain region that preferentially degenerates in HD, is highly unstable, whereas it is rather stable in the disease-spared cerebellum. The mechanisms underlying the age-dependence and tissue-specificity of somatic CAG instability remain obscure. Recent studies have suggested that DNA oxidation and OGG1, a glycosylase involved in the repair of 8-oxoguanine lesions, contribute to this process. We show that in HD mice oxidative DNA damage abnormally accumulates at CAG repeats in a length-dependent, but age- and tissue-independent manner, indicating that oxidative DNA damage alone is not sufficient to trigger somatic instability. Protein levels and activities of major base excision repair (BER) enzymes were compared between striatum and cerebellum of HD mice. Strikingly, 5'-flap endonuclease activity was much lower in the striatum than in the cerebellum of HD mice. Accordingly, Flap Endonuclease-1 (FEN1), the main enzyme responsible for 5'-flap endonuclease activity, and the BER cofactor HMGB1, both of which participate in long-patch BER (LP-BER), were also significantly lower in the striatum compared to the cerebellum. Finally, chromatin immunoprecipitation experiments revealed that POLbeta was specifically enriched at CAG expansions in the striatum, but not in the cerebellum of HD mice. These in vivo data fit a model in which POLbeta strand displacement activity during LP-BER promotes the formation of stable 5'-flap structures at CAG repeats representing pre-expanded intermediate structures, which are not efficiently removed when FEN1 activity is constitutively low. We propose that the stoichiometry of BER enzymes is one critical

  2. Stoichiometry of base excision repair proteins correlates with increased somatic CAG instability in striatum over cerebellum in Huntington's disease transgenic mice.

    Directory of Open Access Journals (Sweden)

    Agathi-Vassiliki Goula

    2009-12-01

    Full Text Available Huntington's disease (HD is a progressive neurodegenerative disorder caused by expansion of an unstable CAG repeat in the coding sequence of the Huntingtin (HTT gene. Instability affects both germline and somatic cells. Somatic instability increases with age and is tissue-specific. In particular, the CAG repeat sequence in the striatum, the brain region that preferentially degenerates in HD, is highly unstable, whereas it is rather stable in the disease-spared cerebellum. The mechanisms underlying the age-dependence and tissue-specificity of somatic CAG instability remain obscure. Recent studies have suggested that DNA oxidation and OGG1, a glycosylase involved in the repair of 8-oxoguanine lesions, contribute to this process. We show that in HD mice oxidative DNA damage abnormally accumulates at CAG repeats in a length-dependent, but age- and tissue-independent manner, indicating that oxidative DNA damage alone is not sufficient to trigger somatic instability. Protein levels and activities of major base excision repair (BER enzymes were compared between striatum and cerebellum of HD mice. Strikingly, 5'-flap endonuclease activity was much lower in the striatum than in the cerebellum of HD mice. Accordingly, Flap Endonuclease-1 (FEN1, the main enzyme responsible for 5'-flap endonuclease activity, and the BER cofactor HMGB1, both of which participate in long-patch BER (LP-BER, were also significantly lower in the striatum compared to the cerebellum. Finally, chromatin immunoprecipitation experiments revealed that POLbeta was specifically enriched at CAG expansions in the striatum, but not in the cerebellum of HD mice. These in vivo data fit a model in which POLbeta strand displacement activity during LP-BER promotes the formation of stable 5'-flap structures at CAG repeats representing pre-expanded intermediate structures, which are not efficiently removed when FEN1 activity is constitutively low. We propose that the stoichiometry of BER enzymes

  3. When "Other" Initiate Repair.

    Science.gov (United States)

    Schegloff, Emanuel A.

    2000-01-01

    Elaborates on the locus of other-initiated repair, and reports on a number of environments in which others initiate repair turns later than the one directly following the trouble-source turn. Describes several ways that other initiation of repair, which occurs in next-turn position, may be delayed within that position. (Author/VWL)

  4. A Decision Support System for Ship Maintenance Capacity Planning

    NARCIS (Netherlands)

    de Boer, R.; Schutten, Johannes M.J.; Zijm, Willem H.M.

    1997-01-01

    In this paper, the basic framework and algorithms of a decision support system are discussed, which enhance process and capacity planning at a large repair shop. The research is strongly motivated by experiences in a project carried out at a dockyard, which performs repair, overhaul and modification

  5. The C-terminal Domain (CTD) of Human DNA Glycosylase NEIL1 Is Required for Forming BERosome Repair Complex with DNA Replication Proteins at the Replicating Genome: DOMINANT NEGATIVE FUNCTION OF THE CTD.

    Science.gov (United States)

    Hegde, Pavana M; Dutta, Arijit; Sengupta, Shiladitya; Mitra, Joy; Adhikari, Sanjay; Tomkinson, Alan E; Li, Guo-Min; Boldogh, Istvan; Hazra, Tapas K; Mitra, Sankar; Hegde, Muralidhar L

    2015-08-21

    The human DNA glycosylase NEIL1 was recently demonstrated to initiate prereplicative base excision repair (BER) of oxidized bases in the replicating genome, thus preventing mutagenic replication. A significant fraction of NEIL1 in cells is present in large cellular complexes containing DNA replication and other repair proteins, as shown by gel filtration. However, how the interaction of NEIL1 affects its recruitment to the replication site for prereplicative repair was not investigated. Here, we show that NEIL1 binarily interacts with the proliferating cell nuclear antigen clamp loader replication factor C, DNA polymerase δ, and DNA ligase I in the absence of DNA via its non-conserved C-terminal domain (CTD); replication factor C interaction results in ∼8-fold stimulation of NEIL1 activity. Disruption of NEIL1 interactions within the BERosome complex, as observed for a NEIL1 deletion mutant (N311) lacking the CTD, not only inhibits complete BER in vitro but also prevents its chromatin association and reduced recruitment at replication foci in S phase cells. This suggests that the interaction of NEIL1 with replication and other BER proteins is required for efficient repair of the replicating genome. Consistently, the CTD polypeptide acts as a dominant negative inhibitor during in vitro repair, and its ectopic expression sensitizes human cells to reactive oxygen species. We conclude that multiple interactions among BER proteins lead to large complexes, which are critical for efficient BER in mammalian cells, and the CTD interaction could be targeted for enhancing drug/radiation sensitivity of tumor cells.

  6. APE1, the DNA base excision repair protein, regulates the removal of platinum adducts in sensory neuronal cultures by NER

    Energy Technology Data Exchange (ETDEWEB)

    Kim, Hyun-Suk [Department of Biochemistry and Molecular Biology, Indianapolis, IN 46202 (United States); Guo, Chunlu; Thompson, Eric L. [Department of Pharmacology and Toxicology, Indianapolis, IN 46202 (United States); Jiang, Yanlin [Department of Pediatrics and Herman B Wells Center for Pediatric Research, Indiana University School of Medicine, Indianapolis, IN 46202 (United States); Kelley, Mark R. [Department of Biochemistry and Molecular Biology, Indianapolis, IN 46202 (United States); Department of Pharmacology and Toxicology, Indianapolis, IN 46202 (United States); Department of Pediatrics and Herman B Wells Center for Pediatric Research, Indiana University School of Medicine, Indianapolis, IN 46202 (United States); Vasko, Michael R. [Department of Pharmacology and Toxicology, Indianapolis, IN 46202 (United States); Lee, Suk-Hee, E-mail: slee@iu.edu [Department of Biochemistry and Molecular Biology, Indianapolis, IN 46202 (United States)

    2015-09-15

    Peripheral neuropathy is one of the major side effects of treatment with the anticancer drug, cisplatin. One proposed mechanism for this neurotoxicity is the formation of platinum adducts in sensory neurons that could contribute to DNA damage. Although this damage is largely repaired by nuclear excision repair (NER), our previous findings suggest that augmenting the base excision repair pathway (BER) by overexpressing the repair protein APE1 protects sensory neurons from cisplatin-induced neurotoxicity. The question remains whether APE1 contributes to the ability of the NER pathway to repair platinum-damage in neuronal cells. To examine this, we manipulated APE1 expression in sensory neuronal cultures and measured Pt-removal after exposure to cisplatin. When neuronal cultures were treated with increasing concentrations of cisplatin for two or three hours, there was a concentration-dependent increase in Pt-damage that peaked at four hours and returned to near baseline levels after 24 h. In cultures where APE1 expression was reduced by ∼80% using siRNA directed at APE1, there was a significant inhibition of Pt-removal over eight hours which was reversed by overexpressing APE1 using a lentiviral construct for human wtAPE1. Overexpressing a mutant APE1 (C65 APE1), which only has DNA repair activity, but not its other significant redox-signaling function, mimicked the effects of wtAPE1. Overexpressing DNA repair activity mutant APE1 (226 + 177APE1), with only redox activity was ineffective suggesting it is the DNA repair function of APE1 and not its redox-signaling, that restores the Pt-damage removal. Together, these data provide the first evidence that a critical BER enzyme, APE1, helps regulate the NER pathway in the repair of cisplatin damage in sensory neurons.

  7. Rezension: Daten, Drohnen, Disziplin. Ein Gespräch über flüchtige Überwachung.

    Directory of Open Access Journals (Sweden)

    Valeska Ringhof

    2014-03-01

    Full Text Available Ein Gespräch über Überwachung und Macht in unserer Gegenwart. Die Soziologen Zygmunt Bauman und David Lyon zeigen wie breit dieses Thema gefächert ist und beleuchten unterschiedliche historische Aspekte, aktuelle Tendenzen und mögliche Weiterentwicklungen.

  8. Convergent Validity with the BERS-2 Teacher Rating Scale and the Achenbach Teacher's Report Form: A Replication and Extension

    Science.gov (United States)

    Benner, Gregory J.; Beaudoin, Kathleen; Mooney, Paul; Uhing, Brad M.; Pierce, Corey D.

    2008-01-01

    In the present study, we sought to extend instrument validation research for a strength-based emotional and behavior rating scale, the "Teacher Rating Scale of the Behavior and Emotional Rating Scale-Second Edition" (BERS-2; Epstein, M. H. (2004). "Behavioral and emotional rating scale" (2nd ed.). Austin, TX: PRO-ED) through…

  9. A dualidade cuidado x educação no cotidiano do berçário

    Directory of Open Access Journals (Sweden)

    Fabiana C. F. de Vitta

    2004-08-01

    Full Text Available Esse trabalho objetivou verificar conceitos relativos ao cuidar e educar, junto a profissionais de berçário. Foram estudados documentos sobre educação infantil e realizadas entrevistas e observações da prática de sete profissionais de berçários, com enfoque nas atividades de cuidados desenvolvidas com as crianças. Os dados foram organizados segundo categorias: função do berçário, conceito de educar e de cuidar e sofreram análise qualitativa, permitindo a confrontação entre o material empírico e o teórico. Os resultados mostraram que os documentos oficiais pouco discutem a fase em questão, deixando imprecisa a relação entre as atividades de cuidado e seu papel educacional. Essa imprecisão se reflete no discurso das profissionais do berçário. As atividades de cuidados passam a estar contidas na educação da criança, na medida em que, na visão das profissionais, têm função disciplinadora. Esse aspecto justifica-se pela falta de formação e pelo fato de vincularem esta atividade às suas experiências de mães.

  10. Visum repertum über den Leichnam des seligen Herrn Hofraths Senckenberg des Stifters des Bürgerhospitals

    OpenAIRE

    2006-01-01

    Handschriftlicher Leichenschaubericht über den verunglückten Johann Christian Senckenberg: 18.11.1772. Unterzeichnet von den Ärzten: Behrends, I. A. ; Krisner, I.C. ; Müller, F. S. ; Giese, J. G. ; Behrends, J. C. ; Jonas, A. I. G. ; Meyer, C. F. ; Bucher, J. L. ; Grasemann, Ch. F.

  11. The influence of PRF on BER performance of THSS UWB radio system with PPM in dense multipath fading environments

    Institute of Scientific and Technical Information of China (English)

    Jia Lin; Zhang Zhongzhao

    2005-01-01

    The influence of pulse repetition frequency(PRF) on performance of wireless digital time hopping spread spectrum(THSS) ultrawide bandwidth(UWB) radio systems with PPM in dense multipath fading environments is firstly investigated. The receiver used in this UWB system is a hybrid selection/maximal-ratio combining(H-S/MRC) diversity receiver in which L strongest multipath components out of N multipath diversity branches are selected and combined using maximal-ratio combining. The exact expressions for the bit error rate(BER) of this UWB system are firstly derived by using the virtual branch technique in term of PRF, the number of multipath components selected and combined L,and multipath spread of the channel and then this BER performance is evaluated. With the computer simulation for impulses having different pulse shapes, numerical results show that PRF, as well as pulse shape and the number of multipath diversity branches selected and combined L, has much effect on the BER performance of this UWB system in dense multipath fading environments. As PRF increases, the BER performance of this UWB system is much degraded under the conditions of fixed L and pulse shape.

  12. Vorläufige Mitteilung über die Beschaffenheit der Ovarialtasche von Chrysochloris, Galeopithecus und Tupaja

    NARCIS (Netherlands)

    Lange, de Daniel

    1922-01-01

    Im Jahre 1917 ist in den Anatomischen Heften die bekannte und schöne Arbeit Sobotta’s erschienen über das Vorkommen und die Bedeutung der Ovarialtasche bei den Säugetieren ¹). Das Hauptergebniss dieser Arbeit ist, dass bei alien Säugetieren (vielleicht mit Ausnahne der Primaten und des Menschen) die

  13. Vorläufige Mitteilung über die Beschaffenheit der Ovarialtasche von Chrysochloris, Galeopithecus und Tupaja

    NARCIS (Netherlands)

    Lange, de Daniel

    1922-01-01

    Im Jahre 1917 ist in den Anatomischen Heften die bekannte und schöne Arbeit Sobotta’s erschienen über das Vorkommen und die Bedeutung der Ovarialtasche bei den Säugetieren ¹). Das Hauptergebniss dieser Arbeit ist, dass bei alien Säugetieren (vielleicht mit Ausnahne der Primaten und des Menschen) die

  14. Convergent Validity with the BERS-2 Teacher Rating Scale and the Achenbach Teacher's Report Form: A Replication and Extension

    Science.gov (United States)

    Benner, Gregory J.; Beaudoin, Kathleen; Mooney, Paul; Uhing, Brad M.; Pierce, Corey D.

    2008-01-01

    In the present study, we sought to extend instrument validation research for a strength-based emotional and behavior rating scale, the "Teacher Rating Scale of the Behavior and Emotional Rating Scale-Second Edition" (BERS-2; Epstein, M. H. (2004). "Behavioral and emotional rating scale" (2nd ed.). Austin, TX: PRO-ED) through…

  15. Die Umsetzung der EU-Richtlinie über Wohnimmobilienkredite: Zur Notwendigkeit einer Gesetzesänderung

    National Research Council Canada - National Science Library

    Meyer, Dirk

    2017-01-01

    Die Richtlinie über Wohnimmobilienkreditverträge für Verbraucher wurde bei ihrer Umsetzung in deutsches Recht um neue Regelungen zur Kreditwürdigkeitsprüfung ergänzt. Die „außergewöhnliche...

  16. Demonstration of Record BER and Number of Users for Optical CDMA (O-CDMA), with Implications to Secure Communications

    Energy Technology Data Exchange (ETDEWEB)

    Mendez, A J; Hernandez, V J; Bennett, C V; Gagliardi, R M; Lennon, W J

    2005-02-25

    We demonstrate a BER of 10{sup -11} for 16 simultaneous users, using wavelength/time O-CDMA. We show the extent to which severe multi-access interference can be used to mask and/or degrade the signal from an intruder.

  17. Human longevity and variation in DNA damage response and repair: study of the contribution of sub-processes using competitive gene-set analysis.

    Science.gov (United States)

    Debrabant, Birgit; Soerensen, Mette; Flachsbart, Friederike; Dato, Serena; Mengel-From, Jonas; Stevnsner, Tinna; Bohr, Vilhelm A; Kruse, Torben A; Schreiber, Stefan; Nebel, Almut; Christensen, Kaare; Tan, Qihua; Christiansen, Lene

    2014-09-01

    DNA-damage response and repair are crucial to maintain genetic stability, and are consequently considered central to aging and longevity. Here, we investigate whether this pathway overall associates to longevity, and whether specific sub-processes are more strongly associated with longevity than others. Data were applied on 592 SNPs from 77 genes involved in nine sub-processes: DNA-damage response, base excision repair (BER), nucleotide excision repair, mismatch repair, non-homologous end-joining, homologous recombinational repair (HRR), RecQ helicase activities (RECQ), telomere functioning and mitochondrial DNA processes. The study population was 1089 long-lived and 736 middle-aged Danes. A self-contained set-based test of all SNPs displayed association with longevity (P-value=9.9 × 10(-5)), supporting that the overall pathway could affect longevity. Investigation of the nine sub-processes using the competitive gene-set analysis by Wang et al indicated that BER, HRR and RECQ associated stronger with longevity than the respective remaining genes of the pathway (P-values=0.004-0.048). For HRR and RECQ, only one gene contributed to the significance, whereas for BER several genes contributed. These associations did, however, generally not pass correction for multiple testing. Still, these findings indicate that, of the entire pathway, variation in BER might influence longevity the most. These modest sized P-values were not replicated in a German sample. This might, though, be due to differences in genotyping procedures and investigated SNPs, potentially inducing differences in the coverage of gene regions. Specifically, five genes were not covered at all in the German data. Therefore, investigations in additional study populations are needed before final conclusion can be drawn.

  18. Percutaneous mitral valve repair.

    Science.gov (United States)

    Gillinov, A Marc; Liddicoat, John R

    2006-01-01

    Surgical mitral valve repair is the procedure of choice to treat mitral regurgitation of all etiologies. Whereas annuloplasty is the cornerstone of mitral valve repair, a variety of other surgical techniques are utilized to correct dysfunction of the leaflets and subvalvular apparatus; in most cases, surgical repair entails application of multiple repair techniques in each patient. Preclinical studies and early human experience have demonstrated that some of these surgical repair techniques can be performed using percutaneous approaches. Specifically, there has been great progress in the development of novel technology to facilitate percutaneous annuloplasty and percutaneous edge-to-edge repair. The objectives of this report were to (1) discuss the surgical foundations for these percutaneous approaches; (2) review device design and experimental and clinical results of percutaneous valve repair; and (3) address future directions, including the key challenges of patient selection and clinical trial design.

  19. Diagnostic accuracy of Ber-EP4 for metastatic adenocarcinoma in serous effusions: a meta-analysis.

    Directory of Open Access Journals (Sweden)

    Bo Wang

    Full Text Available Numerous studies have investigated the utility of Ber-EP4 in differentiating metastatic adenocarcinoma (MAC from malignant epithelial mesothelioma (MM and/or reactive mesothelial cells (RM in serous effusions. However, the results remain controversial. The aim of this study is to determine the overall accuracy of Ber-EP4 in serous effusions for MAC through a meta-analysis of published studies. Publications addressing the accuracy of Ber-EP4 in the diagnosis of MAC were selected from the Pubmed, Embase and Cochrane Library. Data from selected studies were pooled to yield summary sensitivity, specificity, positive and negative likelihood ratio (LR, diagnostic odds ratio (DOR, and receiver operating characteristic (SROC curve. Statistical analysis was performed by Meta-Disc 1.4 and STATA 12.0 softwares. 29 studies, based on 2646 patients, met the inclusion criteria and the summary estimating for Ber-EP4 in the diagnosis of MAC were: sensitivity 0.8 (95% CI: 0.78-0.82, specificity 0.94 (95% CI: 0.93-0.96, positive likelihood ratio (PLR 12.72 (95% CI: 8.66-18.7, negative likelihood ratio (NLR 0.18 (95% CI: 0.12-0.26 and diagnostic odds ratio 95.05 (95% CI: 57.26-157.77. The SROC curve indicated that the maximum joint sensitivity and specificity (Q-value was 0.91; the area under the curve was 0.96. Our findings suggest that BER-EP4 may be a useful diagnostic adjunctive tool for confirming MAC in serous effusions.

  20. Diagnostic accuracy of Ber-EP4 for metastatic adenocarcinoma in serous effusions: a meta-analysis.

    Science.gov (United States)

    Wang, Bo; Li, Diandian; Ou, Xuemei; Yi, Qun; Feng, Yulin

    2014-01-01

    Numerous studies have investigated the utility of Ber-EP4 in differentiating metastatic adenocarcinoma (MAC) from malignant epithelial mesothelioma (MM) and/or reactive mesothelial cells (RM) in serous effusions. However, the results remain controversial. The aim of this study is to determine the overall accuracy of Ber-EP4 in serous effusions for MAC through a meta-analysis of published studies. Publications addressing the accuracy of Ber-EP4 in the diagnosis of MAC were selected from the Pubmed, Embase and Cochrane Library. Data from selected studies were pooled to yield summary sensitivity, specificity, positive and negative likelihood ratio (LR), diagnostic odds ratio (DOR), and receiver operating characteristic (SROC) curve. Statistical analysis was performed by Meta-Disc 1.4 and STATA 12.0 softwares. 29 studies, based on 2646 patients, met the inclusion criteria and the summary estimating for Ber-EP4 in the diagnosis of MAC were: sensitivity 0.8 (95% CI: 0.78-0.82), specificity 0.94 (95% CI: 0.93-0.96), positive likelihood ratio (PLR) 12.72 (95% CI: 8.66-18.7), negative likelihood ratio (NLR) 0.18 (95% CI: 0.12-0.26) and diagnostic odds ratio 95.05 (95% CI: 57.26-157.77). The SROC curve indicated that the maximum joint sensitivity and specificity (Q-value) was 0.91; the area under the curve was 0.96. Our findings suggest that BER-EP4 may be a useful diagnostic adjunctive tool for confirming MAC in serous effusions.

  1. Genotoxic stress and DNA repair in plants: emerging functions and tools for improving crop productivity.

    Science.gov (United States)

    Balestrazzi, Alma; Confalonieri, Massimo; Macovei, Anca; Donà, Mattia; Carbonera, Daniela

    2011-03-01

    Crop productivity is strictly related to genome stability, an essential requisite for optimal plant growth/development. Genotoxic agents (e.g., chemical agents, radiations) can cause both chemical and structural damage to DNA. In some cases, they severely affect the integrity of plant genome by inducing base oxidation, which interferes with the basal processes of replication and transcription, eventually leading to cell death. The cell response to oxidative stress includes several DNA repair pathways, which are activated to remove the damaged bases and other lesions. Information concerning DNA repair in plants is still limited, although results from gene profiling and mutant analysis suggest possible differences in repair mechanisms between plants and other eukaryotes. The present review focuses on the base- and nucleotide excision repair (BER, NER) pathways, which operate according to the most common DNA repair rule (excision of damaged bases and replacement by the correct nucleotide), highlighting the most recent findings in plants. An update on DNA repair in organelles, chloroplasts and mitochondria is also provided. Finally, it is generally acknowledged that DNA repair plays a critical role during seed imbibition, preserving seed vigor. Despite this, only a limited number of studies, described here, dedicated to seeds are currently available.

  2. Capacity and Capacity Utilization in Fishing Industries

    OpenAIRE

    Kirkley, James E; Squires, Dale

    1999-01-01

    Excess capacity of fishing fleets is one of the most pressing problems facing the world's fisheries and the sustainable harvesting of resource stocks. Considerable confusion persists over the definition and measurement of capacity and capacity utilization in fishing. Fishing capacity and capacity utilization, rather than capital (or effort) utilization, provide the appropriate framework. This paper provides both technological-economic and economic definitions of capacity and excess capacity i...

  3. DNA repair in species with extreme lifespan differences

    Science.gov (United States)

    MacRae, Sheila L.; Croken, Matthew McKnight; Calder, R.B.; Aliper, Alexander; Milholland, Brandon; White, Ryan R.; Zhavoronkov, Alexander; Gladyshev, Vadim N.; Seluanov, Andrei; Gorbunova, Vera; Zhang, Zhengdong D.; Vijg, Jan

    2015-01-01

    Differences in DNA repair capacity have been hypothesized to underlie the great range of maximum lifespans among mammals. However, measurements of individual DNA repair activities in cells and animals have not substantiated such a relationship because utilization of repair pathways among animals—depending on habitats, anatomical characteristics, and life styles—varies greatly between mammalian species. Recent advances in high-throughput genomics, in combination with increased knowledge of the genetic pathways involved in genome maintenance, now enable a comprehensive comparison of DNA repair transcriptomes in animal species with extreme lifespan differences. Here we compare transcriptomes of liver, an organ with high oxidative metabolism and abundant spontaneous DNA damage, from humans, naked mole rats, and mice, with maximum lifespans of ∼120, 30, and 3 years, respectively, with a focus on genes involved in DNA repair. The results show that the longer-lived species, human and naked mole rat, share higher expression of DNA repair genes, including core genes in several DNA repair pathways. A more systematic approach of signaling pathway analysis indicates statistically significant upregulation of several DNA repair signaling pathways in human and naked mole rat compared with mouse. The results of this present work indicate, for the first time, that DNA repair is upregulated in a major metabolic organ in long-lived humans and naked mole rats compared with short-lived mice. These results strongly suggest that DNA repair can be considered a genuine longevity assurance system. PMID:26729707

  4. In vitro measurement of DNA base excision repair in isolated mitochondria.

    Science.gov (United States)

    Page, Melissa M; Stuart, Jeffrey A

    2009-01-01

    Mitochondrial DNA (mtDNA) is in relatively close proximity to reactive oxygen species (ROS) arising from spontaneous superoxide formation during respiration. As a result, it sustains oxidative damage that may include base modifications, base loss, and strand breaks. mtDNA replication past sites of oxidative damage can result in the introduction of mutations. mtDNA mutations are associated with various human diseases and can manifest as loss of bioenergetic function. DNA repair processes exist in mitochondria from apparently all metazoans. A fully functional DNA base excision repair (BER) pathway is present in mitochondria of vertebrates. This pathway is catalyzed by a number of DNA glycosylases, an AP endonuclease, polymerase gamma, and a DNA ligase. This chapter outlines the step-by-step protocols for isolating mitochondrial fractions, from a number of different model organisms, of sufficient purity to allow mtDNA repair activities to be measured. It details in vitro assays for the measurement of BER enzyme activities in lysates prepared from isolated mitochondria.

  5. Optimality in DNA repair.

    Science.gov (United States)

    Richard, Morgiane; Fryett, Matthew; Miller, Samantha; Booth, Ian; Grebogi, Celso; Moura, Alessandro

    2012-01-07

    DNA within cells is subject to damage from various sources. Organisms have evolved a number of mechanisms to repair DNA damage. The activity of repair enzymes carries its own risk, however, because the repair of two nearby lesions may lead to the breakup of DNA and result in cell death. We propose a mathematical theory of the damage and repair process in the important scenario where lesions are caused in bursts. We use this model to show that there is an optimum level of repair enzymes within cells which optimises the cell's response to damage. This optimal level is explained as the best trade-off between fast repair and a low probability of causing double-stranded breaks. We derive our results analytically and test them using stochastic simulations, and compare our predictions with current biological knowledge.

  6. A NOVEL CAPACITY ANALYZING METHOD FOR MULTIMEDIA CDMA SYSTEMS BASED ON POWER LEVEL ALLOCATION

    Institute of Scientific and Technical Information of China (English)

    Pan Su; Tung Sang Ng; Feng Guangzeng

    2006-01-01

    A novel method is proposed to analyze the capacity of future Code Division Multiple Access (CDMA) systems carrying multimedia services. The power level allocation is firstly investigated to meet each call's Bit Error Rate (BER) requirement, then the system capacity is defined from the conditions for the existence of the physical meaning of these power levels. Simulation results have shown that the capacity analyzing methods can be well used in the performance evaluation of the system accommodating heterogeneous services and the spectral efficiency of this scheme is higher than the existing ones.

  7. BER Performance of IEEE 802.11ad for Single Carrier and Multi Carrier

    Directory of Open Access Journals (Sweden)

    Abhishek Kumar Gupta

    2012-05-01

    Full Text Available In present scenario 802.11n is one of the fastest standards which is widely popular. It provides a theoretical maximum of 450 megabits per second (Mbps, with a typical throughput of 100Mbps. As we know, there is high demand for higher speed due to an increasing of high definition (HD video on smart phone usage and home entertainment. As 802.11n is not able to provide the required speed needed for these uses, thus there is need for technologies which can meet therequirement. IEEE 802.11ad is one of such standards which meet the requirement needed for the above. IEEE 802.11ad standard operates at 60 GHz frequency, promise to deliver from 1 to 7 Gbps. 60 GHz band is one of the largest unlicensed bandwidth with availability of at least 5 GHz of continuous bandwidth worldwide. In this paper we have tested the IEEE 802.11ad system model Bits Error Rate (BER for different modulation technique under several coding scheme for both Single Carrier and Multi Carriers. In this model the modulation technique mainly used are Binary Phase Shift Keying (BPSK, Quaternary Phase Shift Keying (QPSK, 16-Quadrature Amplitude Modulation (QAM, 64-Quadrature Amplitude Modulation (QAM and the coding scheme used is Low Density Parity Check (LDPC code with different code rate.

  8. Echt und modern? Diskurse über Männlichkeit

    Directory of Open Access Journals (Sweden)

    Florian Kahofer

    2014-09-01

    Full Text Available Der vorliegende Artikel befasst sich mit Repräsentationen von Männlichkeit im österreichischen Lifestyle-Magazin für Männer Wiener. Durch eine korpusbasierte Diskursanalyse wird ein umfassendes Korpus aller Ausgaben des Wieners von Anfang 2002 bis Ende 2012 untersucht. Auf theoretischer Ebene wird dabei eine Verbindung von Kritischer Männlichkeitsforschung (KMF und Feministisch Kritischer Diskursanalyse (FCDA unternommen. Es werden aktuelle Veröffentlichungen zu Kritischer Diskursanalyse und Männlichkeit vorgestellt und diskutiert. Durch den Einsatz einer Konkordanzsoftware werden Konkordanzen des Nomens MANN analysiert. Diese werden allerdings insofern eingeschränkt betrachtet, als nur Nominationen in der Form der häufigsten Adjektiv-Konstruktionen untersucht werden. Die Ergebnisse zeigen, dass neben den Diskursen über Krise und Neue Männlichkeit Themen wie Alter, Körper oder Beziehung auftauchen. Männlichkeit wird als ambivalent und vielfältig dargestellt. Deutungskämpfe um Männlichkeit lassen sich ausmachen.

  9. BER IMPROVEMENT OF WIRELESS LAN IEEE 802.11 STANDARD USING WAVELET PACKET TRANSFORMS

    Directory of Open Access Journals (Sweden)

    Sanjeev Kumar

    2012-09-01

    Full Text Available High data rates and spectral efficiency is the main requirements for wireless communication systems. Orthogonal Frequency Division Multiplexing (OFDM is a special form of multi carrier transmission used to achieve high data rates of the various WLAN standards. WLAN uses an Inverse Fast Fourier Transform (IFFT at the transmitter to modulate a high bit-rate signal onto a number of carriers and ensure orthogonality between the carriers. The FFT-OFDM has a disadvantage that it is inherently inflexible and requires a complex IFFT core. Recently, Wavelet Packet Transform is proposed as an alternate to FFT. It is a multiplexing method in which data is assigned to wavelet sub bands having different time and frequency resolutions. This paper presents a BER analysis of Fourier-based OFDM (FFT-OFDM and Wavelet Packet based OFDM (WPT-OFDM in WLAN standard (IEEE 802.11a. The performance of FFT and WPT OFDM for various modulation techniques such as PSK, DPSK and QAM for varying values of M was evaluated in AWGN Channel.

  10. BER Analysis Using Beat Probability Method of 3D Optical CDMA Networks with Double Balanced Detection

    Directory of Open Access Journals (Sweden)

    Chih-Ta Yen

    2015-01-01

    Full Text Available This study proposes novel three-dimensional (3D matrices of wavelength/time/spatial code for code-division multiple-access (OCDMA networks, with a double balanced detection mechanism. We construct 3D carrier-hopping prime/modified prime (CHP/MP codes by extending a two-dimensional (2D CHP code integrated with a one-dimensional (1D MP code. The corresponding coder/decoder pairs were based on fiber Bragg gratings (FBGs and tunable optical delay lines integrated with splitters/combiners. System performance was enhanced by the low cross correlation properties of the 3D code designed to avoid the beat noise phenomenon. The CHP/MP code cardinality increased significantly compared to the CHP code under the same bit error rate (BER. The results indicate that the 3D code method can enhance system performance because both the beating terms and multiple-access interference (MAI were reduced by the double balanced detection mechanism. Additionally, the optical component can also be relaxed for high transmission scenery.

  11. Damage by insect pests to the Djingarey Ber Mosque in Timbuktu: detection and control

    Directory of Open Access Journals (Sweden)

    Lara Maistrello

    2011-08-01

    Full Text Available The Djingarey Ber Mosque in Timbuktu (Mali is one of the most significant earthen construction in West Africa. Originally constructed in 1327, it was included in 1988 on the World Heritage UNESCO List for its unique architecture and historical importance. During its restoration, recently undertaken by the Aga Khan Trust for Culture, the wooden parts of the roof and architraves showed clear signs of threatening insect presence. In order to identify the pests responsible of the damage, evaluate its extent and suggest a proper control strategy, a detailed survey was performed inside the Mosque complex and in its immediate surroundings. The entomological inspection, performed in the dry-cold season, allowed to detect signs of insect damage in most of the wooden elements, even in the recently replaced beams, but also in walls, pillars and the precious decorated panels. Damages in the wood elements could be attributed to Amitermes evuncifer Silvestri (Termitidae, Bostrychoplites zycheli Marseuli (Bostrichidae and Lyctus africanus Lesne (Lyctidae, which were collected alive on site. Injures in the walls and decorated panels appeared to be performed by hymenopterans such as “plasterer bees” (Colletidae and Sphecidae. From the evaluation of the type and extent of damage in relation to the architecture and materials used in its construction and decoration, the most serious pest and the worse threat for the mosque is represented by termites. Control and preventive measures, in the view of a sustainable, long-lasting integrated management are suggested.

  12. BER PERFORMANCE COMPARISON OF MIMO SYSTEMS USING OSTBC WITH ZF AND ML DECODING

    Directory of Open Access Journals (Sweden)

    Zenitha Rehman

    2014-12-01

    Full Text Available Multiple Input Multiple Output (MIMO systems with multiple antenna elements at both transmitter and receiver ends are an efficient solution for wireless communication systems. They provide high data rates by exploiting the spatial domain under the constraints of limited bandwidth and transmit power. Space-Time Block Coding (STBC is a MIMO transmit strategy which exploits transmit diversity and provides high reliability. Implementation of orthogonal space-time block codes (OSTBCs for a two transmitter–two receiver system under AWGN (Additive White Gaussian Noise channel and flat fading channel is performed. Alamouti code is employed for the STBC. The modulation techniques used are BPSK, QPSK and 16-QAM. Decoding is done using the Zero Forcing (ZF algorithm and Maximum Likelihood (ML algorithm. The BER Performance of each modulation scheme is compared with the un-coded version of the same. Performance comparison between the two decoding techniques is also done. It is found that ML detection offers a slightly better performance for BPSK and QPSK system than ZF detection.

  13. BER of flat-topped Gaussian beam in slant path turbulent atmosphere

    Science.gov (United States)

    Lu, Fang; Han, Yanyan; Han, Xiang-e.; Yang, Rui-ke

    2013-08-01

    Based on the theory of optical wave propagation in the slant path and the ITU-R turbulence structure constant model which is dependent on altitude, the on-axis scintillation index of the flat-topped Gaussian beam at the receiver plane in slant path turbulence was given by using Kolmogorov atmospheric turbulence power spectrum model. The influences of the link altitudes, atmospheric refractive index structure constant C0 at the ground,the source size and the beam order on scintillation index of the flat-topped Gaussian beam are discussed in detail. The result shows that the scintillation index increased first and then decreased with the increase of the beam order. The advantage of a flat-topped Gaussian beam over a single Gaussian beam is restricted to small source sizes, which is consistent with the case of the horizontal path. To find the average bit error rate under weak slant path turbulence, the log-normal distribution model of the intensity fluctuation was used. The influence of beam order and source size on BER was discussed. The result indicates that the smaller sized flat-topped Gaussian beam will bring average bit error rate advantage over the same size Gaussian beam. Our results correctly reduce to the result of the horizontal path with atmospheric structure constant fixed.

  14. Zyklisches Erbrechens-Syndrom beim Erwachsenen: Kasuistik über 5 Patienten

    Directory of Open Access Journals (Sweden)

    Keller K

    2013-01-01

    Full Text Available Hintergründe: Das zyklische Erbrechens- Syndrom (CVS ist eine funktionelle Störung, die aus rezidivierenden stereotypen Erbrechensepisoden besteht, die Stunden bis Tage anhalten, mit dazwischen liegenden symptomfreien Intervallen. Die Diagnose wird häufig erst nach Jahren gestellt. Methoden: Im Zeitraum von Mai 2007 bis November 2010 waren 5 erwachsene Patienten in unserer Behandlung, die den ROME-III-Kriterien eines CVS entsprachen. Sie wurden anamnestiziert, körperlich, laborchemisch, sonographisch und teilweise mittels Ösophago-Gastro-Duodenoskopie (ÖGD untersucht. Ergebnisse: Das CVS hielt bei Diagnosestellung im Durchschnitt 7,5 Jahre an und hatte sich mit durchschnittlich 26 Jahren manifestiert. Die Erbrechensepisoden traten im Durchschnitt 1×/Monat auf und dauerten 3,5 Tage. Symptome waren Übelkeit, Erbrechen sowie Abdomen- und Kopfschmerzen. Die durchgeführten Untersuchungen konnten die Symptomatik nicht erklären. Schlussfolgerungen: Die Diagnose eines CVS wird anhand der typischen Anamnese nach Ausschluss anderer Ursachen eines rezidivierenden Zyklisches Erbrechens-Syndrom beim Erwachsenen: Kasuistik über 5 Patienten K. Keller1, J. Beule2, M. Scholz3, M. Pfnür2, W. Dippold2 Erbrechens gestellt. Es existiert bisher keine evidenzbasierte Standardtherapie, weder zur Akutbehandlung der Erbrechensepisode noch zur Prophylaxe. Zur Akutbehandlung werden Antiemetika, Sedativa und Migränetherapeutika eingesetzt, zur Prophylaxe Amitriptylin und Propranolol.

  15. Online-Jugendberatung. Eine kommunikationswissenschaftliche Arbeit über eMail-, Chat- und Forenberatung

    Directory of Open Access Journals (Sweden)

    Selina Englmayer

    2006-03-01

    Full Text Available Gegenstand dieser kommunikationswissenschaftlichen Diplomarbeit sind eMail-, Chat- und Foren-Beratung für Jugendliche in Österreich. Nach einer Auseinandersetzung mit herkömmlichen Formen von Beratung (face-to-face- und Telefonberatung sowie Ratgeberjournalismus geht es um Definition und Formen der Online-Beratung. Des weiteren werden u.a. spezifische Beratungsstrategien und -methoden aus Theorie und Praxis, AkteurInnen und Rollen, Vor- und Nachteile sowie Qualitätskriterien dieser Beratungsform thematisiert. Weiters setzt sich die Autorin mit Jugendlichen und Internet (Nutzungsverhalten, Mediensozialisation, soziale Beziehungen im Internet auseinander. In der Folge geht es um herkömmliche und computervermittelte Kommunikation (CvK: Kommunikationsformen und -typen, Mediencharakteristika und Spezifika, Modelle der CVK etc. sind in diesem Zusammenhang unter besonderer Berücksichtigung der Online-Jugendberatung Thema. Abschließend stellt die Autorin in Reflexion auf den vorangegangenen theoretischen Teil drei österreichische Fallbeispiele der Online-Beratung für Jugendliche vor. Dabei handelt es sich um eine eMail-Beratungseinrichtung (ChEck iT!, einen Beratungschat (Kinderschutzzentrum Wien sowie ein Online-Forum (wienXtra.

  16. Studien über die deutschen. Machtkämpfe und Habitusentwicklung im 19 und 20

    Directory of Open Access Journals (Sweden)

    Vera Weiler

    1996-01-01

    Full Text Available Norbert Elias. Studien über die Deutschen. Machtkümpfe und Habitusentwicklung im 19. und 20. Jahrhundert, Frankfurt/ M: Suhrkamp, 1992,555 páginas / El libro Los estudios sobre los alemanes. Luchas de poder y desarrollo de los hábitos en el siglo XIX y XX. Reúne trabajos elaborados entre 1961 y 1980 en forma independiente. Los títulos principales en español son: I. Civilización e informalización, II. Un ensayo sobre el nacionalismo, III. Civilización y violencia. Acerca del monopolio de la violencia fisica y sus rupturas, IV. El derrumbe de la civilización, V. Reflexiones acerca de la RFA. La preparación editorial del conjunto y la traducción del segundo ensayo del inglés al alemán estuvieron a cargo de Michael Schróter. Este además inspiró el proyecto del libro y le propuso a Elias la selección para la cual éste escribió una nueva introducción.

  17. Studien über die deutschen. Machtkämpfe und Habitusentwicklung im 19 und 20

    Directory of Open Access Journals (Sweden)

    Vera Weiler

    2010-07-01

    Full Text Available Norbert Elias. Studien über die Deutschen. Machtkümpfe und Habitusentwicklung im 19. und 20. Jahrhundert, Frankfurt/ M: Suhrkamp, 1992,555 páginas / El libro Los estudios sobre los alemanes. Luchas de poder y desarrollo de los hábitos en el siglo XIX y XX. Reúne trabajos elaborados entre 1961 y 1980 en forma independiente. Los títulos principales en español son: I. Civilización e informalización, II. Un ensayo sobre el nacionalismo, III. Civilización y violencia. Acerca del monopolio de la violencia fisica y sus rupturas, IV. El derrumbe de la civilización, V. Reflexiones acerca de la RFA. La preparación editorial del conjunto y la traducción del segundo ensayo del inglés al alemán estuvieron a cargo de Michael Schróter. Este además inspiró el proyecto del libro y le propuso a Elias la selección para la cual éste escribió una nueva introducción.

  18. Performance and capacity analysis of Poisson photon-counting based Iter-PIC OCDMA systems.

    Science.gov (United States)

    Li, Lingbin; Zhou, Xiaolin; Zhang, Rong; Zhang, Dingchen; Hanzo, Lajos

    2013-11-04

    In this paper, an iterative parallel interference cancellation (Iter-PIC) technique is developed for optical code-division multiple-access (OCDMA) systems relying on shot-noise limited Poisson photon-counting reception. The novel semi-analytical tool of extrinsic information transfer (EXIT) charts is used for analysing both the bit error rate (BER) performance as well as the channel capacity of these systems and the results are verified by Monte Carlo simulations. The proposed Iter-PIC OCDMA system is capable of achieving two orders of magnitude BER improvements and a 0.1 nats of capacity improvement over the conventional chip-level OCDMA systems at a coding rate of 1/10.

  19. Deletion of individual Ku subunits in mice causes an NHEJ-independent phenotype potentially by altering apurinic/apyrimidinic site repair.

    Directory of Open Access Journals (Sweden)

    Yong Jun Choi

    Full Text Available Ku70 and Ku80 form a heterodimer called Ku that forms a holoenzyme with DNA dependent-protein kinase catalytic subunit (DNA-PKCS to repair DNA double strand breaks (DSBs through the nonhomologous end joining (NHEJ pathway. As expected mutating these genes in mice caused a similar DSB repair-defective phenotype. However, ku70(-/- cells and ku80(-/- cells also appeared to have a defect in base excision repair (BER. BER corrects base lesions, apurinic/apyrimidinic (AP sites and single stand breaks (SSBs utilizing a variety of proteins including glycosylases, AP endonuclease 1 (APE1 and DNA Polymerase β (Pol β. In addition, deleting Ku70 was not equivalent to deleting Ku80 in cells and mice. Therefore, we hypothesized that free Ku70 (not bound to Ku80 and/or free Ku80 (not bound to Ku70 possessed activity that influenced BER. To further test this hypothesis we performed two general sets of experiments. The first set showed that deleting either Ku70 or Ku80 caused an NHEJ-independent defect. We found ku80(-/- mice had a shorter life span than dna-pkcs(-/- mice demonstrating a phenotype that was greater than deleting the holoenzyme. We also found Ku70-deletion induced a p53 response that reduced the level of small mutations in the brain suggesting defective BER. We further confirmed that Ku80-deletion impaired BER via a mechanism that was not epistatic to Pol β. The second set of experiments showed that free Ku70 and free Ku80 could influence BER. We observed that deletion of either Ku70 or Ku80, but not both, increased sensitivity of cells to CRT0044876 (CRT, an agent that interferes with APE1. In addition, free Ku70 and free Ku80 bound to AP sites and in the case of Ku70 inhibited APE1 activity. These observations support a novel role for free Ku70 and free Ku80 in altering BER.

  20. Bypass of a 5',8-cyclopurine-2'-deoxynucleoside by DNA polymerase β during DNA replication and base excision repair leads to nucleotide misinsertions and DNA strand breaks.

    Science.gov (United States)

    Jiang, Zhongliang; Xu, Meng; Lai, Yanhao; Laverde, Eduardo E; Terzidis, Michael A; Masi, Annalisa; Chatgilialoglu, Chryssostomos; Liu, Yuan

    2015-09-01

    5',8-Cyclopurine-2'-deoxynucleosides including 5',8-cyclo-dA (cdA) and 5',8-cyclo-dG (cdG) are induced by hydroxyl radicals resulting from oxidative stress such as ionizing radiation. 5',8-cyclopurine-2'-deoxynucleoside lesions are repaired by nucleotide excision repair with low efficiency, thereby leading to their accumulation in the human genome and lesion bypass by DNA polymerases during DNA replication and base excision repair (BER). In this study, for the first time, we discovered that DNA polymerase β (pol β) efficiently bypassed a 5'R-cdA, but inefficiently bypassed a 5'S-cdA during DNA replication and BER. We found that cell extracts from pol β wild-type mouse embryonic fibroblasts exhibited significant DNA synthesis activity in bypassing a cdA lesion located in replication and BER intermediates. However, pol β knock-out cell extracts exhibited little DNA synthesis to bypass the lesion. This indicates that pol β plays an important role in bypassing a cdA lesion during DNA replication and BER. Furthermore, we demonstrated that pol β inserted both a correct and incorrect nucleotide to bypass a cdA at a low concentration. Nucleotide misinsertion was significantly stimulated by a high concentration of pol β, indicating a mutagenic effect induced by pol β lesion bypass synthesis of a 5',8-cyclopurine-2'-deoxynucleoside. Moreover, we found that bypass of a 5'S-cdA by pol β generated an intermediate that failed to be extended by pol β, resulting in accumulation of single-strand DNA breaks. Our study provides the first evidence that pol β plays an important role in bypassing a 5',8-cyclo-dA during DNA replication and repair, as well as new insight into mutagenic effects and genome instability resulting from pol β bypassing of a cdA lesion.

  1. Licence to Mine? Ein Überblick über Rahmenbedingungen von Text and Data Mining und den aktuellen Stand der Diskussion.

    OpenAIRE

    Christian Winterhalter

    2016-01-01

    Der Artikel gibt einen Überblick über die Möglichkeiten der Anwendung von Text and Data Mining (TDM) und ähnlichen Verfahren auf der Grundlage bestehender Regelungen in Lizenzverträgen zu kostenpflichtigen elektronischen Ressourcen, die Debatte über zusätzliche Lizenzen für TDM am Beispiel von Elseviers TDM Policy und den Stand der Diskussion über die Einführung von Schrankenregelungen im Urheberrecht für TDM zu nichtkommerziellen wissenschaftlichen Zwecken. The article gives a survey abou...

  2. BER Performance Simulation of Generalized MC DS-CDMA System with Time-Limited Blackman Chip Waveform

    Directory of Open Access Journals (Sweden)

    I. Develi

    2010-09-01

    Full Text Available Multiple access interference encountered in multicarrier direct sequence-code division multiple access (MC DS-CDMA is the most important difficulty that depends mainly on the correlation properties of the spreading sequences as well as the shape of the chip waveforms employed. In this paper, bit error rate (BER performance of the generalized MC DS-CDMA system that employs time-limited Blackman chip waveform is presented for Nakagami-m fading channels. Simulation results show that the use of Blackman chip waveform can improve the BER performance of the generalized MC DS-CDMA system, as compared to the performances achieved by using timelimited chip waveforms in the literature.

  3. Repairs of composite structures

    Science.gov (United States)

    Roh, Hee Seok

    Repair on damaged composite panels was conducted. To better understand adhesively bonded repair, the study investigates the effect of design parameters on the joint strength. The design parameters include bondline length, thickness of adherend and type of adhesive. Adhesives considered in this study were tested to measure their tensile material properties. Three types of adhesively bonded joints, single strap, double strap, and single lap joint were considered under changing bondline lengths, thickness of adherend and type of adhesive. Based on lessons learned from bonded joints, a one-sided patch repair method for composite structures was conducted. The composite patch was bonded to the damaged panel by either film adhesive FM-73M or paste adhesive EA-9394 and the residual strengths of the repaired specimens were compared under varying patch sizes. A new repair method using attachments has been suggested to enhance the residual strength. Results obtained through experiments were analyzed using finite element analysis to provide a better repair design and explain the experimental results. It was observed that the residual strength of the repaired specimen was affected by patch length. Method for rapid repairs of damaged composite structures was investigated. The damage was represented by a circular hole in a composite laminated plate. Pre-cured composite patches were bonded with a quick-curing commercial adhesive near (rather than over) the hole. Tensile tests were conducted on specimens repaired with various patch geometries. The test results showed that, among the methods investigated, the best repair method restored over 90% of the original strength of an undamaged panel. The interfacial stresses in the adhesive zone for different patches were calculated in order to understand the efficiencies of the designs of these patch repairs. It was found that the composite patch that yielded the best strength had the lowest interfacial peel stress between the patch and

  4. Über das schwierige Verhältnis von Ökonomie der Konventionen und Neoinstitutionalismus : review essay

    OpenAIRE

    Grüttner, Michael Siegfried

    2013-01-01

    "Mit 'Über die Rechtfertigung wirtschaftlichen Handelns' legt Lisa KNOLL eine der umfangreichsten und anspruchsvollsten empirischen Anwendungen der Ökonomie der Konventionen vor, die bisher im deutschsprachigen Raum erschienen ist. Das Buch legt den Fokus auf die praktische Bearbeitung von 'Heterogenität' in Bezug auf unterschiedliche Rationalitäten und deren Realisierung in wirtschaftlichen Organisationen. Konkret rekonstruiert die Autorin die Umsetzung des CO2-Emissionshandels in kommunalen...

  5. Ethik als soziale Praxis: Einführung zur Debatte über qualitative Forschung und Ethik

    OpenAIRE

    Roth, Wolff-Michael

    2005-01-01

    Ethische Fragen sind in der Humanforschung zunehmend wichtig geworden. Aus diesem Grund erscheint es angebracht, dass FQS den Fragen eine Debatte widmet, die sich mit den vielen ethischen Entscheidungsebenen in der qualitativen Forschung befassen. In diesem Beitrag greife ich auf persönliche Erfahrungen zurück, um die Ethikdebatte formell im Allgemeinen und die Beiträge im Besonderen einzuleiten. Ich lade unsere Leser und Leserinnen ein, an dieser Debatte über ethische Fragen in der qualitati...

  6. Johannes Sobotta (1869-1945) - Leben und Wirken unter besonderer Berücksichtigung seiner Würzburger Zeit

    OpenAIRE

    Kayßer, Katharina

    2004-01-01

    Professor Johannes Sobotta (1869 - 1945) forschte und lehrte als Anatom in Berlin, Würzburg, Königsberg und Bonn. Sein 1904 erstmalig erschienener "Atlas der deskriptiven Anatomie des Menschen" wurde in 14 Sprachen übersetzt und gehört auch in der 21.Auflage noch immer zur Standard-Literatur der medizinischen Ausbildung. Die vorliegende Dissertation gibt einen umfassenden Einblick in Sobottas Lebenswerk unter besonderer Berücksichtigung seiner Würzburger Zeit.

  7. Johannes Sobotta (1869-1945) - Leben und Wirken unter besonderer Berücksichtigung seiner Würzburger Zeit

    OpenAIRE

    Kayßer, Katharina

    2004-01-01

    Professor Johannes Sobotta (1869 - 1945) forschte und lehrte als Anatom in Berlin, Würzburg, Königsberg und Bonn. Sein 1904 erstmalig erschienener "Atlas der deskriptiven Anatomie des Menschen" wurde in 14 Sprachen übersetzt und gehört auch in der 21.Auflage noch immer zur Standard-Literatur der medizinischen Ausbildung. Die vorliegende Dissertation gibt einen umfassenden Einblick in Sobottas Lebenswerk unter besonderer Berücksichtigung seiner Würzburger Zeit.

  8. Weighted composition operators from F(p, q, s) spaces to Bers-type spaces in the unit ball

    Institute of Scientific and Technical Information of China (English)

    L(U) Xiao-fen

    2009-01-01

    This paper deals with the boundedness and compactness of the weighted compo-sition operators from the F(p, q, s) spaces, including Hardy space, Bergman space, Q~p space,BMOA space, Besov space and α-Bloch space, to Bers-type spaces H_ν~∞( or little Bets-type spaces H_(ν,0)~∞ ), where ν is normal.

  9. Molecular Mechanisms of Ultraviolet Radiation-Induced DNA Damage and Repair

    Directory of Open Access Journals (Sweden)

    Rajesh P. Rastogi

    2010-01-01

    Full Text Available DNA is one of the prime molecules, and its stability is of utmost importance for proper functioning and existence of all living systems. Genotoxic chemicals and radiations exert adverse effects on genome stability. Ultraviolet radiation (UVR (mainly UV-B: 280–315 nm is one of the powerful agents that can alter the normal state of life by inducing a variety of mutagenic and cytotoxic DNA lesions such as cyclobutane-pyrimidine dimers (CPDs, 6-4 photoproducts (6-4PPs, and their Dewar valence isomers as well as DNA strand breaks by interfering the genome integrity. To counteract these lesions, organisms have developed a number of highly conserved repair mechanisms such as photoreactivation, base excision repair (BER, nucleotide excision repair (NER, and mismatch repair (MMR. Additionally, double-strand break repair (by homologous recombination and nonhomologous end joining, SOS response, cell-cycle checkpoints, and programmed cell death (apoptosis are also operative in various organisms with the expense of specific gene products. This review deals with UV-induced alterations in DNA and its maintenance by various repair mechanisms.

  10. Average BER and outage probability of the ground-to-train OWC link in turbulence with rain

    Science.gov (United States)

    Zhang, Yixin; Yang, Yanqiu; Hu, Beibei; Yu, Lin; Hu, Zheng-Da

    2017-09-01

    The bit-error rate (BER) and outage probability of optical wireless communication (OWC) link for the ground-to-train of the curved track in turbulence with rain is evaluated. Considering the re-modulation effects of raining fluctuation on optical signal modulated by turbulence, we set up the models of average BER and outage probability in the present of pointing errors, based on the double inverse Gaussian (IG) statistical distribution model. The numerical results indicate that, for the same covered track length, the larger curvature radius increases the outage probability and average BER. The performance of the OWC link in turbulence with rain is limited mainly by the rain rate and pointing errors which are induced by the beam wander and train vibration. The effect of the rain rate on the performance of the link is more severe than the atmospheric turbulence, but the fluctuation owing to the atmospheric turbulence affects the laser beam propagation more greatly than the skewness of the rain distribution. Besides, the turbulence-induced beam wander has a more significant impact on the system in heavier rain. We can choose the size of transmitting and receiving apertures and improve the shockproof performance of the tracks to optimize the communication performance of the system.

  11. BER and optimal power allocation for amplify-and-forward relaying using pilot-aided maximum likelihood estimation

    KAUST Repository

    Wang, Kezhi

    2014-10-01

    Bit error rate (BER) and outage probability for amplify-and-forward (AF) relaying systems with two different channel estimation methods, disintegrated channel estimation and cascaded channel estimation, using pilot-aided maximum likelihood method in slowly fading Rayleigh channels are derived. Based on the BERs, the optimal values of pilot power under the total transmitting power constraints at the source and the optimal values of pilot power under the total transmitting power constraints at the relay are obtained, separately. Moreover, the optimal power allocation between the pilot power at the source, the pilot power at the relay, the data power at the source and the data power at the relay are obtained when their total transmitting power is fixed. Numerical results show that the derived BER expressions match with the simulation results. They also show that the proposed systems with optimal power allocation outperform the conventional systems without power allocation under the same other conditions. In some cases, the gain could be as large as several dB\\'s in effective signal-to-noise ratio.

  12. Workshop on DNA repair.

    NARCIS (Netherlands)

    A.R. Lehmann (Alan); J.H.J. Hoeijmakers (Jan); A.A. van Zeeland (Albert); C.M.P. Backendorf (Claude); B.A. Bridges; A. Collins; R.P.D. Fuchs; G.P. Margison; R. Montesano; E. Moustacchi; A.T. Natarajan; M. Radman; A. Sarasin; E. Seeberg; C.A. Smith; M. Stefanini (Miria); L.H. Thompson; G.P. van der Schans; C.A. Weber (Christine); M.Z. Zdzienika

    1992-01-01

    textabstractA workshop on DNA repair with emphasis on eukaryotic systems was held, under the auspices of the EC Concerted Action on DNA Repair and Cancer, at Noordwijkerhout (The Netherlands) 14-19 April 1991. The local organization of the meeting was done under the auspices of the Medical Genetic C

  13. Laparoscopic lumbar hernia repair.

    Science.gov (United States)

    Madan, Atul K; Ternovits, Craig A; Speck, Karen E; Pritchard, F Elizabeth; Tichansky, David S

    2006-04-01

    Lumbar hernias are rare clinical entities that often pose a challenge for repair. Because of the surrounding anatomy, adequate surgical herniorraphy is often difficult. Minimally invasive surgery has become an option for these hernias. Herein, we describe two patients with lumbar hernias (one with a recurrent traumatic hernia and one with an incisional hernia). Both of these hernias were successfully repaired laparoscopically.

  14. Similar hyaline-like cartilage repair of osteochondral defects in rabbits using isotropic and anisotropic collagen scaffolds

    NARCIS (Netherlands)

    Mulder, E.L.W. de; Hannink, G.J.; Kuppevelt, T.H. van; Daamen, W.F.; Buma, P.

    2014-01-01

    Lesions in knee joint articular cartilage (AC) have limited repair capacity. Many clinically available treatments induce a fibrous-like cartilage repair instead of hyaline cartilage. To induce hyaline cartilage repair, we hypothesized that type I collagen scaffolds with fibers aligned perpendicular

  15. Effects of plasma on polyethylene fiber surface for prosthodontic application

    Science.gov (United States)

    SPYRIDES, Silvana Marques Miranda; do PRADO, Maíra; de ARAUJO, Joyce Rodrigues; SIMÃO, Renata Antoun; BASTIAN, Fernando Luis

    2015-01-01

    ABSTRACT Plasma technology has the potential to improve the adherence of fibers to polymeric matrices, and there are prospects for its application in dentistry to reinforce the dental particulate composite. Objectives This study aimed to investigate the effect of oxygen or argon plasma treatment on polyethylene fibers. Material and Methods Connect, Construct, InFibra, and InFibra treated with oxygen or argon plasma were topographically evaluated by scanning electron microscopy (SEM), and chemically by X-ray photoelectron spectroscopy (XPS). For bending analysis, one indirect composite (Signum) was reinforced with polyethylene fiber (Connect, Construct, or InFibra). The InFibra fiber was subjected to three different treatments: (1) single application of silane, (2) oxygen or argon plasma for 1 or 3 min, (3) oxygen or argon plasma and subsequent application of silane. The samples (25x2x2 mm), 6 unreinforced and 60 reinforced with fibers, were subjected to three-point loading tests to obtain their flexural strength and deflection. The results were statistically analyzed with ANOVA and the Bonferroni correction for multiple comparison tests. Results SEM analysis showed that oxygen and argon plasma treatments promote roughness on the polyethylene fiber surface. X-ray photoelectron spectroscopy (XPS) analysis shows that both plasmas were effective in incorporating oxygenated functional groups. Argon or oxygen plasma treatment affected the flexural strength and deflection of a fiber reinforced composite. The application of silane does not promote an increase in the flexural strength of the reinforced composites. Conclusions Oxygen and argon plasma treatments were effective in incorporating oxygenated functional groups and surface roughness. The highest strength values were obtained in the group reinforced with polyethylene fibers treated with oxygen plasma for 3 min. PMID:26814463

  16. Effects of plasma on polyethylene fiber surface for prosthodontic application

    Directory of Open Access Journals (Sweden)

    Silvana Marques Miranda SPYRIDES

    2015-12-01

    Full Text Available ABSTRACT Plasma technology has the potential to improve the adherence of fibers to polymeric matrices, and there are prospects for its application in dentistry to reinforce the dental particulate composite. Objectives This study aimed to investigate the effect of oxygen or argon plasma treatment on polyethylene fibers. Material and Methods Connect, Construct, InFibra, and InFibra treated with oxygen or argon plasma were topographically evaluated by scanning electron microscopy (SEM, and chemically by X-ray photoelectron spectroscopy (XPS. For bending analysis, one indirect composite (Signum was reinforced with polyethylene fiber (Connect, Construct, or InFibra. The InFibra fiber was subjected to three different treatments: (1 single application of silane, (2 oxygen or argon plasma for 1 or 3 min, (3 oxygen or argon plasma and subsequent application of silane. The samples (25x2x2 mm, 6 unreinforced and 60 reinforced with fibers, were subjected to three-point loading tests to obtain their flexural strength and deflection. The results were statistically analyzed with ANOVA and the Bonferroni correction for multiple comparison tests. Results SEM analysis showed that oxygen and argon plasma treatments promote roughness on the polyethylene fiber surface. X-ray photoelectron spectroscopy (XPS analysis shows that both plasmas were effective in incorporating oxygenated functional groups. Argon or oxygen plasma treatment affected the flexural strength and deflection of a fiber reinforced composite. The application of silane does not promote an increase in the flexural strength of the reinforced composites. Conclusions Oxygen and argon plasma treatments were effective in incorporating oxygenated functional groups and surface roughness. The highest strength values were obtained in the group reinforced with polyethylene fibers treated with oxygen plasma for 3 min.

  17. DNA repair protocols

    DEFF Research Database (Denmark)

    Bjergbæk, Lotte

    In its 3rd edition, this Methods in Molecular Biology(TM) book covers the eukaryotic response to genomic insult including advanced protocols and standard techniques in the field of DNA repair. Offers expert guidance for DNA repair, recombination, and replication. Current knowledge of the mechanisms...... that regulate DNA repair has grown significantly over the past years with technology advances such as RNA interference, advanced proteomics and microscopy as well as high throughput screens. The third edition of DNA Repair Protocols covers various aspects of the eukaryotic response to genomic insult including...... recent advanced protocols as well as standard techniques used in the field of DNA repair. Both mammalian and non-mammalian model organisms are covered in the book, and many of the techniques can be applied with only minor modifications to other systems than the one described. Written in the highly...

  18. INTERNAL REPAIR OF PIPELINES

    Energy Technology Data Exchange (ETDEWEB)

    Bill Bruce; Nancy Porter; George Ritter; Matt Boring; Mark Lozev; Ian Harris; Bill Mohr; Dennis Harwig; Robin Gordon; Chris Neary; Mike Sullivan

    2005-07-20

    The two broad categories of fiber-reinforced composite liner repair and deposited weld metal repair technologies were reviewed and evaluated for potential application for internal repair of gas transmission pipelines. Both are used to some extent for other applications and could be further developed for internal, local, structural repair of gas transmission pipelines. Principal conclusions from a survey of natural gas transmission industry pipeline operators can be summarized in terms of the following performance requirements for internal repair: (1) Use of internal repair is most attractive for river crossings, under other bodies of water, in difficult soil conditions, under highways, under congested intersections, and under railway crossings. (2) Internal pipe repair offers a strong potential advantage to the high cost of horizontal direct drilling when a new bore must be created to solve a leak or other problem. (3) Typical travel distances can be divided into three distinct groups: up to 305 m (1,000 ft.); between 305 m and 610 m (1,000 ft. and 2,000 ft.); and beyond 914 m (3,000 ft.). All three groups require pig-based systems. A despooled umbilical system would suffice for the first two groups which represents 81% of survey respondents. The third group would require an onboard self-contained power unit for propulsion and welding/liner repair energy needs. (4) The most common size range for 80% to 90% of operators surveyed is 508 mm (20 in.) to 762 mm (30 in.), with 95% using 558.8 mm (22 in.) pipe. Evaluation trials were conducted on pipe sections with simulated corrosion damage repaired with glass fiber-reinforced composite liners, carbon fiber-reinforced composite liners, and weld deposition. Additional un-repaired pipe sections were evaluated in the virgin condition and with simulated damage. Hydrostatic failure pressures for pipe sections repaired with glass fiber-reinforced composite liner were only marginally greater than that of pipe sections without

  19. Radio-adaptive response of base excision repair genes and proteins in human peripheral blood mononuclear cells exposed to gamma radiation.

    Science.gov (United States)

    Toprani, Sneh M; Das, Birajalaxmi

    2015-09-01

    Radio-adaptive response is a mechanism whereby a low-dose exposure (priming dose) induces resistance to a higher dose (challenging dose) thus significantly reducing its detrimental effects. Radiation-induced DNA damage gets repaired through various DNA repair pathways in human cells depending upon the type of lesion. The base excision repair (BER) pathway repairs radiation-induced base damage, abasic sites and single-strand breaks in cellular DNA. In the present study, an attempt has been made to investigate the involvement of BER genes and proteins in the radio-adaptive response in human resting peripheral blood mononuclear cells (PBMC). Venous blood samples were collected from 20 randomly selected healthy male individuals with written informed consent. PBMC were isolated and irradiated at a priming dose of 0.1 Gy followed 4h later with a challenging dose of 2.0 Gy (primed cells). Quantitation of DNA damage was done using the alkaline comet assay immediately and expression profile of BER genes and proteins were studied 30 min after the challenging dose using real-time quantitative polymerase chain reaction and western blot, respectively. The overall result showed significant (P ≤ 0.05) reduction of DNA damage in terms of percentage of DNA in tail (%T) with a priming dose of 0.1 Gy followed by a challenging dose of 2.0 Gy after 4 h. Twelve individuals showed significant (P ≤ 0.05) reduction in %T whereas eight individuals showed marginal reduction in DNA damage that was not statistically significant. However, at the transcriptional level, BER genes such as APE1, FEN1 and LIGASE1 showed significant (P ≤ 0.05) up-regulation in both groups. Significant (P ≤ 0.05) up-regulation was also observed at the protein level for OGG1, APE1, MBD4, FEN1 and LIGASE1 in primed cells. Up-regulation of some BER genes and proteins such as APE1, FEN1 and LIGASE1 in primed cells of resting PBMC is suggestive of active involvement of the BER pathway in radio-adaptive response.

  20. Editor's Highlight: Base Excision Repair Variants and Pesticide Exposure Increase Parkinson's Disease Risk.

    Science.gov (United States)

    Sanders, Laurie H; Paul, Kimberly C; Howlett, Evan H; Lawal, Hakeem; Boppana, Sridhar; Bronstein, Jeff M; Ritz, Beate; Greenamyre, J Timothy

    2017-07-01

    Exposure to certain pesticides induces oxidative stress and increases Parkinson's disease (PD) risk. Mitochondrial DNA (mtDNA) damage is found in dopaminergic neurons in idiopathic PD and following pesticide exposure in experimental models thereof. Base excision repair (BER) is the major pathway responsible for repairing oxidative DNA damage in cells. Whether single nucleotide polymorphisms (SNPs) in BER genes alone or in combination with pesticide exposure influence PD risk is unknown. We investigated the contributions of functional SNPs in 2 BER genes (APEX1 and OGG1) and mitochondrial dysfunction- or oxidative stress-related pesticide exposure, including paraquat, to PD risk. We also studied the effect of paraquat on levels of mtDNA damage and mitochondrial bioenergetics. 619 PD patients and 854 population-based controls were analyzed for the 2 SNPs, APEX1 rs1130409 and OGG1 rs1052133. Ambient pesticide exposures were assessed with a geographic information system. Individually, or in combination, the BER SNPs did not influence PD risk. Mitochondrial-inhibiting (OR = 1.79, 95% CI [1.32, 2.42]), oxidative stress-inducing pesticides (OR = 1.61, 95% CI [1.22, 2.11]), and paraquat (OR = 1.54, 95% CI [1.23, 1.93]) were associated with PD. Statistical interactions were detected, including for a genetic risk score based on rs1130409 and rs1052133 and oxidative stress inducing pesticides, where highly exposed carriers of both risk genotypes were at the highest risk of PD (OR = 2.21, 95% CI [1.25, 3.86]); similar interactions were estimated for mitochondrial-inhibiting pesticides and paraquat alone. Additionally, paraquat exposure was found to impair mitochondrial respiration and increase mtDNA damage in in vivo and in vitro systems. Our findings provide insight into possible mechanisms involved in increased PD risk due to pesticide exposure in the context of BER genotype variants. © The Author 2017. Published by Oxford University Press on behalf of the

  1. Hematopoietic tissue repair under chronic low daily dose irradiation

    Energy Technology Data Exchange (ETDEWEB)

    Seed, T.M.

    1994-12-01

    The capacity of the hematopoietic system to repair constantly accruing cellular damage under chronic, low daily dose gamma irradiation is essential for the maintenance of a functional hematopoietic system, and, in turn, long term survival. In certain individuals, however, such continuous cycles of damage and repair provide an essential inductive environment for selected types of hematopathologies, e.g., myeloid leukemia (ML). We have been studying temporal and causal relationships between hematopoietic capacity, associated repair functions, and propensities for hematologic disease in canines under variable levels of chronic radiation stress (0.3{minus}26.3 cGy d{sup {minus}1}). Results indicate that the maximum exposure rate tolerated by the hematopoietic system is highly individual-specific and is based largely on the degree to which repair capacity, and, in turn, hematopoietic restoration, is augmented under chronic exposure. In low-tolerance individuals (prone to aplastic anemia, subgroup (1), the failure to augment basic m-pair functions seemingly results in a progressive accumulation of genetic and cellular damage within vital progenitorial marrow compartments particularly marked within erythroid compartments. that results in loss of reproductive capacity and ultimately in collapse of the hematopoietic system. The high-tolerance individuals (radioaccomodated and either prone- or not prone to ML, subgroup 2 & 3 appear to minimize the accumulating damage effect of daily exposures by extending repair functions, which preserves reproductive integrity and fosters regenerative hematopoietic responses. As the strength of the regenerative response manifests the extent of repair augmentation, the relatively strong response of high- tolerance individuals progressing to patent ML suggests an insufficiency of repair quality rather than repair quantity.

  2. INTERNAL REPAIR OF PIPELINES

    Energy Technology Data Exchange (ETDEWEB)

    Robin Gordon; Bill Bruce; Ian Harris; Dennis Harwig; George Ritter; Bill Mohr; Matt Boring; Nancy Porter; Mike Sullivan; Chris Neary

    2004-12-31

    The two broad categories of fiber-reinforced composite liner repair and deposited weld metal repair technologies were reviewed and evaluated for potential application for internal repair of gas transmission pipelines. Both are used to some extent for other applications and could be further developed for internal, local, structural repair of gas transmission pipelines. Principal conclusions from a survey of natural gas transmission industry pipeline operators can be summarized in terms of the following performance requirements for internal repair: (1) Use of internal repair is most attractive for river crossings, under other bodies of water, in difficult soil conditions, under highways, under congested intersections, and under railway crossings. (2) Internal pipe repair offers a strong potential advantage to the high cost of horizontal direct drilling when a new bore must be created to solve a leak or other problem. (3) Typical travel distances can be divided into three distinct groups: up to 305 m (1,000 ft.); between 305 m and 610 m (1,000 ft. and 2,000 ft.); and beyond 914 m (3,000 ft.). All three groups require pig-based systems. A despooled umbilical system would suffice for the first two groups which represents 81% of survey respondents. The third group would require an onboard self-contained power unit for propulsion and welding/liner repair energy needs. (4) The most common size range for 80% to 90% of operators surveyed is 508 mm (20 in.) to 762 mm (30 in.), with 95% using 558.8 mm (22 in.) pipe. Evaluation trials were conducted on pipe sections with simulated corrosion damage repaired with glass fiber-reinforced composite liners, carbon fiber-reinforced composite liners, and weld deposition. Additional un-repaired pipe sections were evaluated in the virgin condition and with simulated damage. Hydrostatic failure pressures for pipe sections repaired with glass fiber-reinforced composite liner were only marginally greater than that of pipe sections without

  3. Narzissmus und Subjektivität : psychoanalytische Betrachtungen eines zeitgemäßen Erscheinungsbildes unter Berücksichtigung der zugrunde liegenden Dialektik zwischen Gesellschaft und Individuum

    OpenAIRE

    Bornhauser,Niklas

    2005-01-01

    Der Narzissmus ist ein zentraler Begriff psychoanalytischer Praxis und Theoriebildung. Vorwiegend klinisch orientierte Begriffsbestimmungen des Narzissmus tendieren naturgemäß dazu, gesellschaftliche, kulturelle oder erkenntniswissenschaftliche Mutationen nicht ausreichend zu berücksichtigen. Die Beachtung des kulturellen und sozialen Kontexts der Emergenz des Narzissmus sowie die Berücksichtigung des zugrunde liegenden epochalen Wandels, die Ablösung der Moderne durch die einsetzende Postmod...

  4. Wie die Medienberichterstattung über die Wirtschaft das Bild der Menschen von der Wirtschaft prägt. Eine Analyse zur Rezeption von Wirtschaftsnachrichten

    OpenAIRE

    Müller-Klier, Maike

    2012-01-01

    Was Menschen über die Welt wissen, hat im Prinzip drei Quellen: eigene Erfahrung, personale Kommunikation und mediale Information. Die Arbeit geht der Frage nach, was die Menschen über den Weltausschnitt wissen, der gemeinhin als „Wirtschaft“ bezeichnet wird, und inwieweit dieses Wissen seinen Ursprung in den Massenmedien hat. Da es zu dieser Frage kaum relevante Forschung gibt, aus der sich themaspezifische Annahmen ableiten ließen, basiert die Arbeit im Wesentlichen auf Theorien und Erkennt...

  5. SIRT1 promotes DNA repair activity in response to radiation

    Energy Technology Data Exchange (ETDEWEB)

    Jeong, Jae-Min; Lee, Kee-Ho [Korea Institute of Radiological and Medical Sciences, Seoul (Korea, Republic of)

    2006-07-01

    Human SIRT1 controls various physiological responses including cell fate, stress, and aging, through deacetylation of its specific substrate protein. In processing DNA damage signaling, SIRT1 attenuates a cellular apoptotic response by deacetylation of p53 tumor suppressor. Ectopically over-expressed SIRT1 resulted in the increase of repair of DNA strand breakages produced by radiation. On the other hand, repression of endogenous SIRT1 expression by SIRT1 siRNA led to the decrease of this repair activity, indicating that SIRT1 can regulate DNA repair capacity of cells with DNA strand breaks.

  6. INTERNAL REPAIR OF PIPELINES

    Energy Technology Data Exchange (ETDEWEB)

    Robin Gordon; Bill Bruce; Ian Harris; Dennis Harwig; George Ritter; Bill Mohr; Matt Boring; Nancy Porter; Mike Sullivan; Chris Neary

    2004-08-17

    The two broad categories of fiber-reinforced composite liner repair and deposited weld metal repair technologies were reviewed and evaluated for potential application for internal repair of gas transmission pipelines. Both are used to some extent for other applications and could be further developed for internal, local, structural repair of gas transmission pipelines. Principal conclusions from a survey of natural gas transmission industry pipeline operators can be summarized in terms of the following performance requirements for internal repair: (1) Use of internal repair is most attractive for river crossings, under other bodies of water, in difficult soil conditions, under highways, under congested intersections, and under railway. (2) Internal pipe repair offers a strong potential advantage to the high cost of horizontal direct drilling when a new bore must be created to solve a leak or other problem. (3) Typical travel distances can be divided into three distinct groups: up to 305 m (1,000 ft.); between 305 m and 610 m (1,000 ft. and 2,000 ft.); and beyond 914 m (3,000 ft.). All three groups require pig-based systems. A despooled umbilical system would suffice for the first two groups which represents 81% of survey respondents. The third group would require an onboard self-contained power unit for propulsion and welding/liner repair energy needs. (4) The most common size range for 80% to 90% of operators surveyed is 508 mm (20 in.) to 762 mm (30 in.), with 95% using 558.8 mm (22 in.) pipe. Evaluation trials were conducted on pipe sections with simulated corrosion damage repaired with glass fiber-reinforced composite liners, carbon fiber-reinforced composite liners, and weld deposition. Additional un-repaired pipe sections were evaluated in the virgin condition and with simulated damage. Hydrostatic failure pressures for pipe sections repaired with glass fiber-reinforced composite liner were only marginally greater than that of pipe sections without liners

  7. Salvage hypospadias repairs

    Directory of Open Access Journals (Sweden)

    Sripathi V

    2008-01-01

    Full Text Available Aim: Review of our experience and to develop an algorithm for salvage procedures in the management of hypospadias cripples and treatment of urethral strictures following hypospadias repair. Methods: This is a retrospective review of hypospadias surgeries over a 41-month period. Out of a total 168 surgeries, 20 were salvage/re-operative repairs. In three children a Duplay repair was feasible, while in four others a variety of single-stage repairs could be done. The repair was staged in seven children - buccal mucosal grafts (BMGs in five, buccal mucosal tube in one, and skin graft in one. Five children with dense strictures were managed by dorsal BMG inlay grafting in one, vascularized tunical onlay grafting on the ventrum in one, and a free tunical patch in one. Three children were treated by internal urethrotomy and stenting for four weeks with a poor outcome. Results: The age of children ranged from 1.5-15 years (mean 4.5. Follow-up ranged from 3 months to 3.5 years. Excellent results were obtained in 10 children (50% with a well-surfaced erect penis and a slit-like meatus. Glans closure could not be achieved and meatus was coronal in three. Two children developed fistulae following a Duplay repair and following a staged BMG. Three repairs failed completely - a composite repair broke down, a BMG tube stenosed with a proximal leak, and a stricture recurred with loss of a ventral free tunical graft. Conclusions: In salvage procedures performed on hypospadias cripples, a staged repair with buccal mucosa as an inlay in the first stage followed by tubularization 4-6 months later provides good results. A simple algorithm to plan corrective surgery in failed hypospadias cases and obtain satisfactory results is devised.

  8. Age and gender effects on DNA strand break repair in peripheral blood mononuclear cells

    DEFF Research Database (Denmark)

    Garm, Christian; Moreno-Villanueva, Maria; Bürkle, Alexander;

    2013-01-01

    single-strand breaks (SSBs) and double-strand breaks (DSBs) in human peripheral blood mononuclear cells (PBMCs). Of these lesions, DSBs are the least frequent but the most dangerous for cells. We have measured the level of endogenous SSBs, SSB repair capacity, γ-H2AX response, and DSB repair capacity...... in a study population consisting of 216 individuals from a population-based sample of twins aged 40-77 years. Age in this range did not seem to have any effect on the SSB parameters. However, γ-H2AX response and DSB repair capacity decreased with increasing age, although the associations did not reach...

  9. Enhanced cartilage repair in 'healer' mice-New leads in the search for better clinical options for cartilage repair.

    Science.gov (United States)

    Fitzgerald, Jamie

    2017-02-01

    Adult articular cartilage has a poor capacity to undergo intrinsic repair. Current strategies for the repair of large cartilage defects are generally unsatisfactory because the restored cartilage does not have the same resistance to biomechanical loading as authentic articular cartilage and degrades over time. Recently, an exciting new research direction, focused on intrinsic cartilage regeneration rather than fibrous repair by external means, has emerged. This review explores the new findings in this rapidly moving field as they relate to the clinical goal of restoration of structurally robust, stable and non-fibrous articular cartilage following injury.

  10. Progress of peripheral nerve repair

    Institute of Scientific and Technical Information of China (English)

    陈峥嵘

    2002-01-01

    Study on repair of peripheral nerve injury has been proceeding over a long period of time. With the use of microsurgery technique since 1960s,the quality of nerve repair has been greatly improved. In the past 40 years, with the continuous increase of surgical repair methods, more progress has been made on the basic research of peripheral nerve repair.

  11. Achilles tendon repair

    Science.gov (United States)

    Achilles tendon rupture-surgery; Percutaneous Achilles tendon rupture repair ... To fix your torn Achilles tendon, the surgeon will: Make a cut down the back of your heel Make several small cuts rather than one large cut ...

  12. Diaphragmatic hernia repair - slideshow

    Science.gov (United States)

    ... presentations/100014.htm Diaphragmatic hernia repair - series—Normal anatomy To use the sharing ... Overview The chest cavity includes the heart and lungs. The abdominal cavity includes the liver, the stomach, ...

  13. Eye muscle repair - slideshow

    Science.gov (United States)

    ... page: //medlineplus.gov/ency/presentations/100062.htm Eye muscle repair - series—Normal anatomy To use the sharing ... the eyeball to the eye socket. The external muscles of the eye are found behind the conjunctiva. ...

  14. Tracheoesophageal fistula repair - slideshow

    Science.gov (United States)

    ... page: //medlineplus.gov/ency/presentations/100103.htm Tracheoesophageal fistula repair - series—Normal anatomy To use the sharing ... Editorial team. Related MedlinePlus Health Topics Esophagus Disorders Fistulas Tracheal Disorders A.D.A.M., Inc. is ...

  15. Inguinal hernia repair - slideshow

    Science.gov (United States)

    ... page: //medlineplus.gov/ency/presentations/100027.htm Inguinal hernia repair - series—Normal anatomy To use the sharing ... to slide 4 out of 4 Overview A hernia occurs when part of an organ protrudes through ...

  16. INTERNAL REPAIR OF PIPELINES

    Energy Technology Data Exchange (ETDEWEB)

    Robin Gordon; Bill Bruce; Ian Harris; Dennis Harwig; Nancy Porter; Mike Sullivan; Chris Neary

    2004-04-12

    The two broad categories of deposited weld metal repair and fiber-reinforced composite liner repair technologies were reviewed for potential application for internal repair of gas transmission pipelines. Both are used to some extent for other applications and could be further developed for internal, local, structural repair of gas transmission pipelines. Preliminary test programs were developed for both deposited weld metal repair and for fiber-reinforced composite liner repair. Evaluation trials have been conducted using a modified fiber-reinforced composite liner provided by RolaTube and pipe sections without liners. All pipe section specimens failed in areas of simulated damage. Pipe sections containing fiber-reinforced composite liners failed at pressures marginally greater than the pipe sections without liners. The next step is to evaluate a liner material with a modulus of elasticity approximately 95% of the modulus of elasticity for steel. Preliminary welding parameters were developed for deposited weld metal repair in preparation of the receipt of Pacific Gas & Electric's internal pipeline welding repair system (that was designed specifically for 559 mm (22 in.) diameter pipe) and the receipt of 559 mm (22 in.) pipe sections from Panhandle Eastern. The next steps are to transfer welding parameters to the PG&E system and to pressure test repaired pipe sections to failure. A survey of pipeline operators was conducted to better understand the needs and performance requirements of the natural gas transmission industry regarding internal repair. Completed surveys contained the following principal conclusions: (1) Use of internal weld repair is most attractive for river crossings, under other bodies of water, in difficult soil conditions, under highways, under congested intersections, and under railway crossings. (2) Internal pipe repair offers a strong potential advantage to the high cost of horizontal direct drilling (HDD) when a new bore must be created

  17. Pectus excavatum repair - slideshow

    Science.gov (United States)

    ... this page: //medlineplus.gov/ency/presentations/100035.htm Pectus excavatum repair - series—Normal anatomy To use the sharing ... Go to slide 4 out of 4 Overview Pectus excavatum is a deformity of the front of the ...

  18. Hiatal hernia repair - slideshow

    Science.gov (United States)

    ... presentations/100028.htm Hiatal hernia repair - series—Normal anatomy To use the sharing features on ... Overview The esophagus runs through the diaphragm to the stomach. It functions to carry food from the mouth ...

  19. Repairing ceramic insulating tiles

    Science.gov (United States)

    Dunn, B. R.; Laymance, E. L.

    1980-01-01

    Fused-silica tiles containing large voids or gauges are repaired without adhesives by plug insertion method. Tiles are useful in conduits for high-temperature gases, in furnaces, and in other applications involving heat insulation.

  20. Rotator cuff repair - slideshow

    Science.gov (United States)

    ... this page: //medlineplus.gov/ency/presentations/100229.htm Rotator cuff repair - series—Normal anatomy To use the sharing ... to slide 4 out of 4 Overview The rotator cuff is a group of muscles and tendons that ...

  1. Cleft lip repair - slideshow

    Science.gov (United States)

    ... this page: //medlineplus.gov/ency/presentations/100010.htm Cleft lip repair - series—Normal anatomy To use the sharing ... abnormal opening in the middle of the upper lip. A cleft palate is an opening in the roof of ...

  2. Berättelser som redskap för att föra och följa resonemang

    Directory of Open Access Journals (Sweden)

    Camilla Björklund

    2016-10-01

    Full Text Available Abstract: The aim of this study is to identify different ways of reasoning when preschool children create stories based on a given theme and with both a traditional and an unfamiliar framework for stories. 17 children participated in the study and the analysis shows three different ways to create stories: 1 stories with a fairy tale structure; 2 expressionist and fragmented accounts; 3 stories focusing on weather and seasonal changes. The cultural tools that children are offered (structure of a story are used by some children to create traditional stories, but not as a tool for creating new forms of stories. The results show that children’s knowledge of the content within the stories and their conceptual understanding seem to play an important role for the ways in which the structure of stories are used as tools for reasoning.Sammadrag: Syftet med denna studie är att klargöra olika sätt att resonera när förskolebarn själva konstruerar berättelser utifrån ett givet tema och inför en traditionell och en mer kontroversiell form för berättelser. 17 barn deltog i studien och analysen visar på tre olika sätt att konstruera berättelser: 1 Berättelser med sagostruktur; 2 Expressionistiska och fragmentariska redogörelser; 3 Berättelser med fokus på väder- och årstidsväxlingar. Det kulturella redskap som barnen erbjuds (berättelsestrukturen används av en del av barnen för att skapa traditionella berättelser, men inte som stöd för nyskapade former av berättelser. Resultaten visar att barn kunnande om innehållet i berättelserna och begreppsförståelse tycks spela en betydelsefull roll för hur barns berättelser används som redskap för resonemang.

  3. Grey Repairable System Analysis

    Institute of Scientific and Technical Information of China (English)

    Renkuan Guo; Charles Ernie Love

    2006-01-01

    In this paper, we systematically discuss the basic concepts of grey theory, particularly the grey differential equation and its mathematical foundation, which is essentially unknown in the reliability engineering community. Accordingly,we propose a small-sample based approach to estimate repair improvement effects by partitioning system stopping times into intrinsic functioning times and repair improvement times. An industrial data set is used for illustrative purposes in a stepwise manner.

  4. Excision repair of UV radiation-induced DNA damage in Caenorhabditis elegans

    Energy Technology Data Exchange (ETDEWEB)

    Hartman, P.S.; Hevelone, J.; Dwarakanath, V.; Mitchell, D.L. (Texas Christian Univ., Fort Worth (USA))

    1989-06-01

    Radioimmunoassays were used to monitor the removal of antibody-binding sites associated with the two major UV radiation-induced DNA photoproducts (cyclobutane dimers and (6-4) photoproducts). Unlike with cultured human cells, where (6-4) photoproducts are removed more rapidly than cyclobutane dimers, the kinetics of repair were similar for both lesions. Repair capacity in wild type diminished throughout development. The radioimmunoassays were also employed to confirm the absence of photoreactivation in C. elegans. In addition, three radiation-sensitive mutants (rad-1, rad-2, rad-7) displayed normal repair capacities. An excision defect was much more pronounced in larvae than embryos in the fourth mutant tested (rad-3). This correlates with the hypersensitivity pattern of this mutant and suggests that DNA repair may be developmentally regulated in C. elegans. The mechanism of DNA repair in C. elegans as well as the relationship between the repair of specific photoproducts and UV radiation sensitivity during development are discussed.

  5. A novel method for monitoring functional lesion-specific recruitment of repair proteins in live cells

    Energy Technology Data Exchange (ETDEWEB)

    Woodrick, Jordan; Gupta, Suhani; Khatkar, Pooja; Dave, Kalpana; Levashova, Darya; Choudhury, Sujata; Elias, Hadi; Saha, Tapas; Mueller, Susette; Roy, Rabindra, E-mail: rr228@georgetown.edu

    2015-05-15

    Highlights: • A method of monitoring lesion-specific recruitment of proteins in vivo is described. • Recruitment of repair enzymes to abasic sites is monitored by co-localization. • Repair protein recruitment is consistent with known protein–protein relationships. • Cells demonstrated complete repair of abasic sites by 90 min. - Abstract: DNA–protein relationships have been studied by numerous methods, but a particular gap in methodology lies in the study of DNA adduct-specific interactions with proteins in vivo, which particularly affects the field of DNA repair. Using the repair of a well-characterized and ubiquitous adduct, the abasic (AP) site, as a model, we have developed a comprehensive method of monitoring DNA lesion-specific recruitment of proteins in vivo over time. We utilized a surrogate system in which a Cy3-labeled plasmid containing a single AP-site was transfected into cells, and the interaction of the labeled DNA with BER enzymes, including APE1, Polβ, LIG1, and FEN1, was monitored by immunofluorescent staining of the enzymes by Alexafluor-488-conjugated secondary antibody. The recruitment of enzymes was characterized by quantification of Cy3-Alexafluor-488 co-localization. To validate the microscopy-based method, repair of the transfected AP-site DNA was also quantified at various time points post-transfection using a real time PCR-based method. Notably, the recruitment time kinetics for each enzyme were consistent with AP-site repair time kinetics. This microscopy-based methodology is reliable in detecting the recruitment of proteins to specific DNA substrates and can be extended to study other in vivo DNA–protein relationships in any DNA sequence and in the context of any DNA structure in transfectable proliferating or quiescent cells. The method may be applied to a variety of disciplines of nucleic acid transaction pathways, including repair, replication, transcription, and recombination.

  6. Israelkritik und Antisemitismus? Eine vergleichende Analyse der deutschen Presseberichterstattung über 2. Intifada und Gaza-Krieg

    Directory of Open Access Journals (Sweden)

    Markus Maurer

    2011-10-01

    Full Text Available Die deutsche Medienberichterstattung über den Nahost-Konflikt wurde verschiedentlich dahingehend kritisiert, einen anti-israelische Bias zu haben, der die alten, gebräuchlichen Vorurteile und Stereotype gegenüber Juden stärke und die Anschuldigung unterstütze, die Juden würden die Tragik des Holocaust missbrauchen um die israelische Palästina-Politik zu rechtfertigen: Insbesondere während des Gaza-Krieges sei Israel als Aggressor dargestellt, der palästinensische Terrorismus dagegen heruntergespielt worden. Bisher gibt es kaum systematische Forschung zu dieser Frage. Die vorliegende Studie soll diese Lücke zu füllen helfen, indem sie eine vergleichende Inhaltsanalyse der Berichterstattung über die 2. Intifada und den Gaza-Krieg in Die Welt, Frankfurter Allgemeine Zeitung, Süddeutsche Zeitung, Frankfurter Rundschau und Tageszeitung vornimmt. Eine repräsentative Stichprobe von 396 Artikeln aus diesen Zeitungen, die das gesamte politische Spektrum von rechts nach links abdecken, wurde entlang der drei Dimensionen (1 Darstellung des Verhaltens der Konfliktparteien, (2 Bewertung ihrer Intentionen und Handlungen, und (3 Interpunktion des Konfliktes & Darstellung seiner Opfer analysiert. Die Ergebnisse der Studie zeigen, dass die Darstellung beider Konflikte weit differenzierter war als von ihren Kritikern angenommen. Auch während des Gaza-Krieges hat die deutsche Qualitätspresse ihr Bestes getan, sich nicht auf die Seite der Palästinenser zu schlagen. Falls sie tatsächlich zur Stärkung anti-israelischer oder sogar antisemitischer Einstellungen beigetragen hat, so war dies eher der Erzeugung von Reaktanz geschuldet als einem anti-israelischen Bias der Berichterstattung.

  7. Extensional flow behavior of aqueous guar gum derivative solutions by capillary breakup elongational rheometry (CaBER).

    Science.gov (United States)

    Szopinski, Daniel; Handge, Ulrich A; Kulicke, Werner-Michael; Abetz, Volker; Luinstra, Gerrit A

    2016-01-20

    The extensional rheological properties of aqueous ionic carboxymethyl hydroxypropyl guar gum (CMHPG) and non-ionic hydroxypropyl guar gum (HPG) solutions between the semi-dilute solution state and the concentrated network solution state were investigated by capillary breakup elongational rheometry (CaBER). Carboxymethylated guar gum derivatives show an instable filament formation in deionized water. The ratio of elongational relaxation time λE over the shear relaxation time λS follows a power law of λE/λS∼(c · [η])(-2). The difference of the relaxation times in shear and elongation can be related to the loss of entanglements and superstructures in elongational flows at higher strains.

  8. BER and FER Prediction of Control and Traffic Channels for a GSM type of interface

    DEFF Research Database (Denmark)

    Wigard, Jeroen; Nielsen, Thomas Toftegaard; Michaelsen, Per Henrik

    1998-01-01

    Performance analysis of a mobile communications system is often done separately at network and at link level. It is difficult to study a modern mobile communications system like GSM analytically, due to the complexity. Hence simulations are used. It is desirable to include all link aspects...... in a network simulator, but without having to simulate every single link, since this would be to time consuming. In this paper a method is presented to find the BER and FER from the signal to interference (C/I) values for a GSM type of air-interface, which can be used for integration of link aspects...

  9. Zur 'Ansteckungswirkung' von Gewalt gegenüber Ausländern : Anwendung eines Schwellenwertmodells kollektiven Verhaltens

    OpenAIRE

    1992-01-01

    'In diesem Aufsatz geht es um die theoretische Erklärung gewalttätiger Anschläge gegenüber Ausländern in Deutschland nach der Wiedervereinigung. Dabei sollen die beiden folgenden Fragen beantwortet werden: 1. Unter welchen Bedingungen kommt es zu derartigen Anschlägen auf der Mikroebene einzelner Akteure? 2. Wie kommt es zu einem sprunghaften Anstieg von Gewalt auf der gesamtgesellschaftlichen Makroebene? Zur Beantwortung dieser Fragen werden ein Attitüden- und ein Schwellenwertmodell kollekt...

  10. Lernen durchs selber tun Über Zeitungs-Workshops und partizipative Zugänge des Kinder-KURIER

    OpenAIRE

    heinz "kiku" wagner

    2011-01-01

    Trotz Reduktion des (Seiten-)Umfangs spielt im Kinder-KURIER die Vermittlung von (Medien-)Kompetenz und Empowerment eine große Rolle - in den Zeitungs-Workshops in- und außerhalb der Redaktion. Am Anfang – vor mehr als 20 Jahren nach mehr als zehn Jahren journalistischer Tätigkeit in der ich viel über diskriminierte Gruppen wie Frauen, Migrant_innen, Behinderte, damals noch Umweltbewegte, Radfahrer_innen und eben auch Kinder und Jugendliche geschrieben hatte - stand die Idee: Alle oder di...

  11. Über die Quellen der mexikanischen Tafeln der „Ansichten der Kordilleren“ im Nachlass Alexander von Humboldts

    OpenAIRE

    Leitner, Ulrike

    2010-01-01

    Der Vergleich mit Humboldts Tagebüchern bietet Aufschlüsse über die für Humboldt typische Arbeitsweise und die Wege seines Wissenserwerbs. Seine eigenen Beobachtungen während des Aufenthaltes in Mexiko sind ergänzt durch persönliche Kontakte vor Ort, durch Literatur- und Archivstudien in Mexiko und nach der Rückkehr in europäischen Archiven. So hat er beispielsweise die Pyramiden von Teotihuacan nicht besucht, aber die Beschreibung aus einem Brief von Juan José de Oteyza, den er am Real Semin...

  12. Das Thema “Altern” in Arno Geigers Roman «Alles über Sally»

    Directory of Open Access Journals (Sweden)

    Meike Dackweiler

    2013-11-01

    Full Text Available Alles über Sally (All about Sally is the fifth novel of the successful Austrian author Arno Geiger. While it was both praised and criticized for being a contemporary adaption of the adultery novel, little importance was attached to the theme of ageing, which pervades the whole novel. Moreover, adulterous female characters over fifty are rare in contemporary German literature. Given these premises, this essay examines the composition of the ageing characters in the novel and provides a discussion of the social construction of images of ageing.

  13. Investigations on the role of base excision repair and non-homologous end-joining pathways in sodium selenite-induced toxicity and mutagenicity in Saccharomyces cerevisiae.

    Science.gov (United States)

    Mániková, Dominika; Vlasáková, Danusa; Loduhová, Jana; Letavayová, Lucia; Vigasová, Dana; Krascsenitsová, Eva; Vlcková, Viera; Brozmanová, Jela; Chovanec, Miroslav

    2010-03-01

    Selenium (Se) belongs to nutrients that are essential for human health. Biological activity of this compound, however, mainly depends on its dose, with a potential of Se to induce detrimental effects at high doses. Although mechanisms lying behind detrimental effects of Se are poorly understood yet, they involve DNA damage induction. Consequently, DNA damage response and repair pathways may play a crucial role in cellular response to Se. Using Saccharomyces cerevisiae we showed that sodium selenite (SeL), an inorganic form of Se, can be toxic and mutagenic in this organism due to its ability to induce DNA double-strand breaks (DSBs). Moreover, we reported that a spectrum of mutations induced by this compound in the stationary phase of growth is mainly represented by 1-4 bp deletions. Consequently, we proposed that SeL acts as an oxidizing agent in yeast producing oxidative damage to DNA. As short deletions could be anticipated to arise as a result of action of non-homologous end-joining (NHEJ) and oxidative damage to DNA is primarily coped with base excision repair (BER), a contribution of these two pathways towards survival, DSB induction, mutation frequency and types of mutations following SeL exposure was examined in present study. First, we show that while NHEJ plays no role in repairing toxic DNA lesions induced by SeL, cells with impairment in BER are sensitized towards this compound. Of BER activities examined, those responsible for processing of 3'-blocking DNA termini seem to be the most crucial for manifestation of the toxic effects of SeL in yeast. Second, an impact of NHEJ and BER on DSB induction after SeL exposure turned to be inappreciable, as no increase in DNA double-strand breakage in NHEJ and BER single or NHEJ BER double mutant upon SeL exposure was observed. Finally, we demonstrate that impairment in both these pathways does not importantly change mutation frequency after SeL exposure and that NHEJ is not responsible for generation of short

  14. Interaction of DNA repair gene polymorphisms and aflatoxin B1 in the risk of hepatocellular carcinoma

    OpenAIRE

    2014-01-01

    Aflatoxin B1 (AFB1) is an important environmental carcinogen and can induce DNA damage and involve in the carcinogenesis of hepatocellular carcinoma (HCC). The deficiency of DNA repair capacity related to the polymorphisms of DNA repair genes might play a central role in the process of HCC tumorigenesis. However, the interaction of DNA repair gene polymorphisms and AFB1 in the risk of hepatocellular carcinoma has not been elucidated. In this study, we investigated whether six polymorphisms (i...

  15. Capacity Versus Bit Error Rate Trade-Off in the DVB-S2 Forward Link

    Directory of Open Access Journals (Sweden)

    Matteo Berioli

    2007-05-01

    Full Text Available The paper presents an approach to optimize the use of satellite capacity in DVB-S2 forward links. By reducing the so-called safety margins, in the adaptive coding and modulation technique, it is possible to increase the spectral efficiency at expenses of an increased BER on the transmission. The work shows how a system can be tuned to operate at different degrees of this trade-off, and also the performance which can be achieved in terms of BER/PER, spectral efficiency, and interarrival, duration, strength of the error bursts. The paper also describes how a Markov chain can be used to model the ModCod transitions in a DVB-S2 system, and it presents results for the calculation of the transition probabilities in two cases.

  16. Capacity Versus Bit Error Rate Trade-Off in the DVB-S2 Forward Link

    Directory of Open Access Journals (Sweden)

    Berioli Matteo

    2007-01-01

    Full Text Available The paper presents an approach to optimize the use of satellite capacity in DVB-S2 forward links. By reducing the so-called safety margins, in the adaptive coding and modulation technique, it is possible to increase the spectral efficiency at expenses of an increased BER on the transmission. The work shows how a system can be tuned to operate at different degrees of this trade-off, and also the performance which can be achieved in terms of BER/PER, spectral efficiency, and interarrival, duration, strength of the error bursts. The paper also describes how a Markov chain can be used to model the ModCod transitions in a DVB-S2 system, and it presents results for the calculation of the transition probabilities in two cases.

  17. Damage, DNA Repair, Aging, and Neurodegeneration

    Science.gov (United States)

    Maynard, Scott; Fang, Evandro Fei; Scheibye-Knudsen, Morten; Croteau, Deborah L.; Bohr, Vilhelm A.

    2017-01-01

    Aging in mammals is accompanied by a progressive atrophy of tissues and organs, and stochastic damage accumulation to the macromolecules DNA, RNA, proteins, and lipids. The sequence of the human genome represents our genetic blueprint, and accumulating evidence suggests that loss of genomic maintenance may causally contribute to aging. Distinct evidence for a role of imperfect DNA repair in aging is that several premature aging syndromes have underlying genetic DNA repair defects. Accumulation of DNA damage may be particularly prevalent in the central nervous system owing to the low DNA repair capacity in postmitotic brain tissue. It is generally believed that the cumulative effects of the deleterious changes that occur in aging, mostly after the reproductive phase, contribute to species-specific rates of aging. In addition to nuclear DNA damage contributions to aging, there is also abundant evidence for a causative link between mitochondrial DNA damage and the major phenotypes associated with aging. Understanding the mechanistic basis for the association of DNA damage and DNA repair with aging and age-related diseases, such as neurodegeneration, would give insight into contravening age-related diseases and promoting a healthy life span. PMID:26385091

  18. Characterization of DNA repair phenotypes of Xeroderma pigmentosum cell lines by a paralleled in vitro test; Phenotypage de la reparation de l'ADN de lignees Xeroderma pigmentosum, par un test in vitro multiparametrique

    Energy Technology Data Exchange (ETDEWEB)

    Raffin, A.L.

    2009-06-15

    DNA is constantly damaged modifying the genetic information for which it encodes. Several cellular mechanisms as the Base Excision Repair (BER) and the Nucleotide Excision Repair (NER) allow recovering the right DNA sequence. The Xeroderma pigmentosum is a disease characterised by a deficiency in the NER pathway. The aim of this study was to propose an efficient and fast test for the diagnosis of this disease as an alternative to the currently available UDS test. DNA repair activities of XP cell lines were quantified using in vitro miniaturized and paralleled tests in order to establish DNA repair phenotypes of XPA and XPC deficient cells. The main advantage of the tests used in this study is the simultaneous measurement of excision or excision synthesis (ES) of several lesions by only one cellular extract. We showed on one hand that the relative ES of the different lesions depend strongly on the protein concentration of the nuclear extract tested. Working at high protein concentration allowed discriminating the XP phenotype versus the control one, whereas it was impossible under a certain concentration's threshold. On the other hand, while the UVB irradiation of control cells stimulated their repair activities, this effect was not observed in XP cells. This study brings new information on the XPA and XPC protein roles during BER and NER and underlines the complexity of the regulations of DNA repair processes. (author)

  19. Calculation of BER in multi-channel silicon optical interconnects: comparative analysis of strip and photonic crystal waveguides

    Science.gov (United States)

    You, Jie; Lavdas, Spyros; Panoiu, Nicolae C.

    2016-05-01

    We present an effective approach to evaluate the performance of multi-channel silicon (Si) photonic systems. The system is composed of strip Si photonic waveguides (Si-PhWs) with uniform cross-section or photonic-crystal (PhC) Si waveguides (Si-PhCWs), combined with a set of direct-detection receivers. Moreover, the optical field in each channel is the superposition of a continuous-wave nonreturn-to-zero ON-OFF keying modulated signal and a white Gaussian noise. In order to characterize the optical signal propagation in the waveguides, an accurate mathematical model describing all relevant linear and nonlinear optical effects and its linearized version is employed. In addition, two semi-analytical methods, time- and frequency-domain Karhunen-Loève series expansion, are used to assess the system bit-error-rate (BER). Our analysis reveals that Si-PhCWs provide similar performance as Si-PhWs, but for 100× shorter length. Importantly, much worse BER is achieved in Si-PhCWs when one operates in slow-light regime, due to the enhanced linear and nonlinear effects.

  20. Growth and Dispersion the Silica Particle on the Glass via Modified Stöber Method and Spray Technique

    Directory of Open Access Journals (Sweden)

    Van Thi Thanh Ho*

    2016-06-01

    Full Text Available We presented the fabrication of a novel geometric light trapping structure based on silica particle. This light trapping structure with good morphology was fabricated through modified Stöber method and spray technique. More importantly, the silica particles were dispersed onto glass by using bottom-up or chemical approach involves a common route used to synthesis silica particles from atomic or molecular scale. An optimized synthesis condition is a combination of optimal values of each reaction parameter of Stöber method that could produce homogenous and mono-dispersed silica nanoparticles with uniform size. The diameter of silica particles can be varied from 200, 430, 560, 460 nm by increasing concentrations of ammonia from 2.33 mM to 4.65 mM, 9.31 mM and 13.96 mM, respectively. We found that the silica particle size was well controlled and uniform from ~200 nm to 560 nm by controlling the ammonia concentration. These results open up the possibility to further fabricate geometric light trapping structure with high scattering level (haze and subsequently to increase the short circuit current density (Jsc in the solar cells

  1. EVALUATION OF BER FOR VARIOUS FADING CHANNEL IN DWT BASED MIMO-OFDM SYSTEM

    OpenAIRE

    D.Meenakshi; Prabha, S.; N. R. Raajan

    2013-01-01

    MIMO communication is mainly use in the OFDM to improve the communication performance and capacity. DWT based MIMO-OFDM is used in this paper. Compare to the FFT based MIMO-OFDM it has lot advantages. There is no need for cyclic prefix, flexibility and optimal resolution. Ripple(Wavelet) concept has developed as a fresh scientific implement with the aim of preserve be functional in several applications such as processing of image, biomedical manufacturing, radar, physics, organize systems als...

  2. 枣实蝇产卵选择习性研究%Oviposition preference of ber fruit fly

    Institute of Scientific and Technical Information of China (English)

    胡陇生; 朱银飞; 齐长江; 任玲; 田呈明

    2012-01-01

    通过枣实蝇产卵选择习性研究,发现枣实蝇喜欢产卵于枣果的背阴面及底部,其产卵孔周围呈现凹陷或瘤状凸起症状,且对不同品种枣果的产卵选择性不同,‘鸡心枣’、‘骏枣’对枣实蝇的抗性大于‘梨枣’、‘灰枣’和‘相枣’;枣果受伤害程度越重,产卵量就越少;不同大小的枣果均受到危害,且以中型果受害最为严重;随枣果成熟度的增加其产卵量逐渐减少,且不产卵于完全红的枣果上.同时枣实蝇对枣、海棠果、青杏、番茄、葡萄等不同寄主的产卵选择性均存在显著性差异,但更喜欢产卵于枣果.胁迫性寄主试验中不同寄主果实的产卵量存在显著差异,但枣果与杏之间的产卵量差异不明显,而且枣实蝇可以在杏果中化蛹并羽化.%The ber fruit fly Carpomya vesuviana Costa preferred to oviposit on the shades and bottom of jujube based on our study on oviposition preference. The oviposition aperture showed hollow and lump-like shapes. It was showed that the ber fruit fly had different ovipositional selection to different varieties of jujube. The 'Jix-inzao' jujube and ' Junzao' jujube were less severely damaged than ' pear jujube', ' grey jujube' and ' Xiang jujube' . It ovipositional selection decreased as the extent of damage increased. The ber fruit fly's harms to the jujube differed depending on jujube size. The medium-sized jujube was more hurtful than others. Its ovipositional selection decreased as the maturing stage of the jujube increased. The ber fruit fly showed no ovipositional selection at full maturity. The jujube was more hurtful than others and had significant difference in oviposition preference for jujube, Beijing flowering crab, apricot, tomato and grape. No significant difference existed between jujube and apricot, but significant difference existed in oviposition preference between different species of hosts. The ber fruit fly could pupate and eclose on the

  3. Biochemical Characterization of Mycobacterium tuberculosis DNA Repair Enzymes – Nfo, XthA and Nei2

    Directory of Open Access Journals (Sweden)

    Sailau Abeldenov

    2014-01-01

    Full Text Available Introduction: Tuberculosis (TB is a human disease caused by Mycobacterium tuberculosis (Mtb. Treatment of TB requires long-term courses of multi-drug therapies to eliminate subpopulations of bacteria, which sometimes persist against antibiotics. Therefore, understanding of the mechanism of Mtb antibiotic-resistance is extremely important. During infection, Mtb overcomes a variety of body defense mechanisms, including treatment with the reactive species of oxygen and nitrogen. The bases in DNA molecule are susceptible to the damages caused by reactive forms of intermediate compounds of oxygen and nitrogen. Most of this damage is repaired by the base excision repair (BER pathway. In this study, we aimed to biochemically characterize three Mtb DNA repair enzymes of BER pathway. Methods: XthA, nfo, and nei genes were identified in mycobacteria by homology search of genomic sequences available in the GenBank database. We used standard methods of genetic engineering  to clone and sequence Mtb genes, which coded Nfo, XthA and Nei2 repair enzymes. The protein products of Mtb genes were expressed and purified in Escherichia coli using affinity tags. The enzymatic activity of purified Nfo, XthA, and Nei2 proteins were measured using radioactively labeled DNA substrates containing various modified residues. Results: The genes end (Rv0670, xthA (Rv0427c, and nei (Rv3297 were PCR amplified using genomic DNA of Mtb H37Rv with primers that contain specific restriction sites. The amplified products were inserted into pET28c(+ expression vector in such a way that the recombinant proteins contain C-terminal histidine tags. The plasmid constructs were verified by sequencing and then transformed into the Escherichia coli BL21 (DE3 strain. Purification of recombinant proteins was performed using Ni2+ ions immobilized affinity column, coupled with the fast performance liquid chromatography machine AKTA. Identification of the isolated proteins was performed by

  4. Detecting and Correcting Speech Repairs

    CERN Document Server

    Heeman, P A; Heeman, Peter; Allen, James

    1994-01-01

    Interactive spoken dialog provides many new challenges for spoken language systems. One of the most critical is the prevalence of speech repairs. This paper presents an algorithm that detects and corrects speech repairs based on finding the repair pattern. The repair pattern is built by finding word matches and word replacements, and identifying fragments and editing terms. Rather than using a set of prebuilt templates, we build the pattern on the fly. In a fair test, our method, when combined with a statistical model to filter possible repairs, was successful at detecting and correcting 80\\% of the repairs, without using prosodic information or a parser.

  5. DNA base excision repair nanosystem engineering: model development.

    Science.gov (United States)

    Sokhansanj, B A

    2005-01-01

    DNA base damage results from a combination of endogenous sources, (normal metabolism, increased metabolism due to obesity, stress from diseases such as arthritis and diabetes, and ischemia) and the environment (ingested toxins, ionizing radiation, etc.). If unrepaired DNA base damage can lead to diminished cell function, and potentially diseases and eventually mutations that lead to cancer. Sophisticated DNA repair mechanisms have evolved in all living cells to preserve the integrity of inherited genetic information and transcriptional control. Understanding a system like DNA repair is greatly enhanced by using engineering methods, in particular modeling interactions and using predictive simulation to analyze the impact of perturbations. We describe the use of such a "nanosystem engineering" approach to analyze the DNA base excision repair pathway in human cells, and use simulation to predict the impact of varying enzyme concentration on DNA repair capacity.

  6. External morphology of the immature stages of Neotropical heliconians: VIII. Philaethria wernickei (Röber (Lepidoptera, Nymphalidae, Heliconiinae Morfologia externa dos estágios imaturos de heliconíneos neotropicais: VIII. Philaethria wernickei (Röber (Lepidoptera, Nymphalidae, Heliconiinae

    Directory of Open Access Journals (Sweden)

    Kim R. Barão

    2010-01-01

    Full Text Available The external features of egg, larva, and pupa of Philaethria wernickei (Röber, 1906 are described and illustrated, based upon light and scanning electron microscopy.As estruturas externas do ovo, larva e pupa de Philaethria wernickei (Röber, 1906 são descritas e ilustradas, baseadas em microscopia ótica e eletrônica de varredura.

  7. Bone marrow-derived cells in renal repair

    NARCIS (Netherlands)

    Broekema, Martine

    2007-01-01

    The kidney can recover after acute renal injury due to its highly effective endogenous regenerative capacity. However, under certain conditions the balance between injury and repair can get disturbed. This can ultimately lead to chronic renal failure, which is an increasing problem in the clinical s

  8. Mediendebatten über soziale Ungleichheit, Armut und soziale Gerechtigkeit seit 1946 und wie sie mit Einkommensungleichheit zusammenhängen / Media Debates about Social Inequality, Poverty and Social Justice since 1946 and How They Are Connected to Income Inequality

    National Research Council Canada - National Science Library

    Martin Schröder; Florian Vietze

    2015-01-01

    ... über soziale Ungleichheit, Armut und soziale Gerechtigkeit berichten. Zwar geschieht dies je nach Presseorgan in unterschiedlichem Umfang, doch die Berichterstattung unterliegt gemeinsamen Schwankungen, welche auf einen...

  9. Average BER analysis of SCM-based free-space optical systems by considering the effect of IM3 with OSSB signals under turbulence channels.

    Science.gov (United States)

    Lim, Wansu; Cho, Tae-Sik; Yun, Changho; Kim, Kiseon

    2009-11-09

    In this paper, we derive the average bit error rate (BER) of subcarrier multiplexing (SCM)-based free space optics (FSO) systems using a dual-drive Mach-Zehnder modulator (DD-MZM) for optical single-sideband (OSSB) signals under atmospheric turbulence channels. In particular, we consider the third-order intermodulation (IM3), a significant performance degradation factor, in the case of high input signal power systems. The derived average BER, as a function of the input signal power and the scintillation index, is employed to determine the optimum number of SCM users upon the designing FSO systems. For instance, when the user number doubles, the input signal power decreases by almost 2 dBm under the log-normal and exponential turbulence channels at a given average BER.

  10. Presence of base excision repair enzymes in the wheat aleurone and their activation in cells undergoing programmed cell death.

    Science.gov (United States)

    Bissenbaev, Amangeldy K; Ishchenko, Alexander A; Taipakova, Sabira M; Saparbaev, Murat K

    2011-10-01

    Cereal aleurone cells are specialized endosperm cells that produce enzymes to hydrolyze the starchy endosperm during germination. Aleurone cells can undergo programmed cell death (PCD) when incubated in the presence of gibberellic acid (GA) in contrast to abscisic acid (ABA) which inhibits the process. The progression of PCD in aleurone layer cells of wheat grain is accompanied by an increase in deoxyribonuclease (DNase) activities and the internucleosomal degradation of nuclear DNA. Reactive oxygen species (ROS) are increased during PCD in the aleurone cells owing to the β-oxidation of triglycerides and inhibition of the antioxidant enzymes possibly leading to extensive oxidative damage to DNA. ROS generate mainly non-bulky DNA base lesions which are removed in the base excision repair (BER) pathway, initiated by the DNA glycosylases. At present, very little is known about oxidative DNA damage repair in cereals. Here, we study DNA repair in the cell-free extracts of wheat aleurone layer incubated or not with phytohormones. We show, for the first time, the presence of 8-oxoguanine-DNA and ethenoadenine-DNA glycosylase activities in wheat aleurone cells. Interestingly, the DNA glycosylase and AP endonuclease activities are strongly induced in the presence of GA. Based on these data we propose that GA in addition to activation of nuclear DNases also induces the DNA repair activities which remove oxidized DNA bases in the BER pathway. Potential roles of the wheat DNA glycosylases in GA-induced oligonucleosomal fragmentation of DNA and metabolic activation of aleurone layer cells via repair of transcribed regions are discussed.

  11. Groin hernia repair in young males: mesh or sutured repair?

    DEFF Research Database (Denmark)

    Bisgaard, T; Bay-Nielsen, M; Kehlet, H

    2010-01-01

    Large-scale data for the optimal inguinal hernia repair in younger men with an indirect hernia is not available. We analysed nationwide data for risk of reoperation in younger men after a primary repair using a Lichtenstein operation or a conventional non-mesh hernia repair....

  12. Cleft lip and palate repair

    Science.gov (United States)

    ... this page: //medlineplus.gov/ency/article/002979.htm Cleft lip and palate repair To use the sharing features on this page, please enable JavaScript. Cleft lip and cleft palate repair is surgery to fix birth defects ...

  13. Abdominal aortic aneurysm repair - open

    Science.gov (United States)

    ... this page: //medlineplus.gov/ency/article/007392.htm Abdominal aortic aneurysm repair - open To use the sharing features on this page, please enable JavaScript. Open abdominal aortic aneurysm repair is surgery to fix a widened part ...

  14. Capacity Statement for Railways

    DEFF Research Database (Denmark)

    Landex, Alex

    2007-01-01

    The subject “Railway capacity” is a combination of the capacity consumption and how the capacity is utilized. The capacity utilization of railways can be divided into 4 core elements: The number of trains; the average speed; the heterogeneity of the operation; and the stability. This article...... describes how the capacity consumption for railways can be worked out and analytical measurements of how the capacity is utilized. Furthermore, the article describes how it is possible to state and visualize railway capacity. Having unused railway capacity is not always equal to be able to operate more...

  15. New insights in the removal of the hydantoins, oxidation product of pyrimidines, via the base excision and nucleotide incision repair pathways.

    Science.gov (United States)

    Redrejo-Rodríguez, Modesto; Saint-Pierre, Christine; Couve, Sophie; Mazouzi, Abdelghani; Ishchenko, Alexander A; Gasparutto, Didier; Saparbaev, Murat

    2011-01-01

    Oxidative damage to DNA, if not repaired, can be both miscoding and blocking. These genetic alterations can lead to mutations and/or cell death, which in turn cause cancer and aging. Oxidized DNA bases are substrates for two overlapping repair pathways: base excision (BER) and nucleotide incision repair (NIR). Hydantoin derivatives such as 5-hydroxyhydantoin (5OH-Hyd) and 5-methyl-5-hydroxyhydantoin (5OH-5Me-Hyd), major products of cytosine and thymine oxidative degradation pathways, respectively, have been detected in cancer cells and ancient DNA. Hydantoins are blocking lesions for DNA polymerases and excised by bacterial and yeast DNA glycosylases in the BER pathway. However little is known about repair of pyrimidine-derived hydantoins in human cells. Here, using both denaturing PAGE and MALDI-TOF MS analyses we report that the bacterial, yeast and human AP endonucleases can incise duplex DNA 5' next to 5OH-Hyd and 5OH-5Me-Hyd thus initiating the NIR pathway. We have fully reconstituted the NIR pathway for these lesions in vitro using purified human proteins. Depletion of Nfo in E. coli and APE1 in HeLa cells abolishes the NIR activity in cell-free extracts. Importantly, a number of redundant DNA glycosylase activities can excise hydantoin residues, including human NTH1, NEIL1 and NEIL2 and the former protein being a major DNA glycosylase activity in HeLa cells extracts. This study demonstrates that both BER and NIR pathways can compete and/or back-up each other to remove hydantoin DNA lesions in vivo.

  16. New insights in the removal of the hydantoins, oxidation product of pyrimidines, via the base excision and nucleotide incision repair pathways.

    Directory of Open Access Journals (Sweden)

    Modesto Redrejo-Rodríguez

    Full Text Available BACKGROUND: Oxidative damage to DNA, if not repaired, can be both miscoding and blocking. These genetic alterations can lead to mutations and/or cell death, which in turn cause cancer and aging. Oxidized DNA bases are substrates for two overlapping repair pathways: base excision (BER and nucleotide incision repair (NIR. Hydantoin derivatives such as 5-hydroxyhydantoin (5OH-Hyd and 5-methyl-5-hydroxyhydantoin (5OH-5Me-Hyd, major products of cytosine and thymine oxidative degradation pathways, respectively, have been detected in cancer cells and ancient DNA. Hydantoins are blocking lesions for DNA polymerases and excised by bacterial and yeast DNA glycosylases in the BER pathway. However little is known about repair of pyrimidine-derived hydantoins in human cells. METHODOLOGY/PRINCIPAL FINDINGS: Here, using both denaturing PAGE and MALDI-TOF MS analyses we report that the bacterial, yeast and human AP endonucleases can incise duplex DNA 5' next to 5OH-Hyd and 5OH-5Me-Hyd thus initiating the NIR pathway. We have fully reconstituted the NIR pathway for these lesions in vitro using purified human proteins. Depletion of Nfo in E. coli and APE1 in HeLa cells abolishes the NIR activity in cell-free extracts. Importantly, a number of redundant DNA glycosylase activities can excise hydantoin residues, including human NTH1, NEIL1 and NEIL2 and the former protein being a major DNA glycosylase activity in HeLa cells extracts. CONCLUSIONS/SIGNIFICANCE: This study demonstrates that both BER and NIR pathways can compete and/or back-up each other to remove hydantoin DNA lesions in vivo.

  17. Nanomaterials promise better bone repair

    OpenAIRE

    Qifei Wang; Jianhua Yan; Junlin Yang; Bingyun Li

    2016-01-01

    Nanomaterials mimicking the nano-features of bones and offering unique smart functions are promising for better bone fracture repair. This review provides an overview of the current state-of-the-art research in developing and using nanomaterials for better bone fracture repair. This review begins with a brief introduction of bone fracture repair processes, then discusses the importance of vascularization, the role of growth factors in bone fracture repair, and the failure of bone fracture rep...

  18. Laparoscopic repair of femoral hernia

    OpenAIRE

    Yang, Xue-Fei; Liu, Jia-Lin

    2016-01-01

    Laparoscopic repair of inguinal hernia is mini-invasive and has confirmed effects. Femoral hernia could be repaired through the laparoscopic procedures for inguinal hernia. These procedures have clear anatomic view in the operation and preoperatively undiagnosed femoral hernia could be confirmed and treated. Lower recurrence ratio was reported in laparoscopic procedures compared with open procedures for repair of femoral hernia. The technical details of laparoscopic repair of femoral hernia, ...

  19. Berlin Brandenburg International (BER: planning and implementation of a concrete supply chain for the airport construction site

    Directory of Open Access Journals (Sweden)

    Guido Riedel

    2012-12-01

    Full Text Available Background: With the decision to extend the airport Berlin-Schönefeld to the new airport Berlin Brandenburg International (BER in 2006, a construction of superlatives has emerged. One of the biggest challenges was the supply of around 2.5 million cubic meters of high quality concrete that had to be produced for the construction of the airport. Due to the scale of this enterprise as well as its environment, the logistic solution of raw material supply has to be found.       Method: The planning of the concrete supply chain for the airport construction site BER had to be carried out with two major goals: the stability of the supply chain to assure that the demands of the construction site are met and delays are prevented, as well as assurance of the high quality standards of the concrete production and to avoid an alkali silica reaction and the resulting unavoidable disaggregation of the concrete. External effects, such as the carbon dioxide emission and the effect of the supply chain on adjoining residents were key factors that had to be integrated in a holistic supply chain concept.  The principle underlying method is an analysis of limiting conditions for two approaches: a centralized supply chain with on-site concrete factory and upstream transport of raw materials versus a decentralized supply chain with off-site factories and downstream transport of ready-mixed concrete. Results: The analysis of constraints and the effects on key requirements of the concrete supply chain for the BER airport construction site lead to the installation of the most modern concrete plant in Europe. The benefits of a centralized supply chain are significant. On one hand, the high quality standards can be met with the on-site mixture of the concrete and centralized quality assurance, on the other hand, the majority of the supply traffic for the construction site was moved from the road to train-bound logistics, meeting the emission requirements of the

  20. Contexto dos berçários e um programa de intervenção no desenvolvimento de bebés

    OpenAIRE

    Almeida, Carla Skilhan; Venturella, Cintia Barreto; Valentini, Nadia Cristina

    2013-01-01

    O objetivo deste estudo foi investigar o contexto de berçários que atendesse a famílias de baixa renda e verificar o impacto de uma intervenção cognitivo-motora no desenvolvimento de bebés quanto à motricidade ampla, motricidade fina, linguagem e interação. Participaram do estudo 40 bebés, entre seis e oito meses, provenientes de dez berçários para famílias de baixa renda. As escolas foram agrupadas quanto à qualidade dos cuidados oferecidos; os bebés foram estratificados por gênero e aleator...

  1. Radiological effects of an aircraft crash into the BER II research reactor. Comparison of effects for HEU and LEU fuels; Radiologische Auswirkungen eines Flugzeugabsturzes auf den Forschungsreaktor BER II. Vergleich der Auswirkungen bei HEU- und LEU-Brennstoff

    Energy Technology Data Exchange (ETDEWEB)

    Axmann, A. [Hahn-Meitner-Institut Berlin GmbH (Germany). Zentralabteilung Reaktor; Boehnert, R. [Kernforschungszentrum Karlsruhe GmbH (Germany). Inst. fuer Neutronenphysik und Reaktortechnik; Ehrhardt, J. [Kernforschungszentrum Karlsruhe GmbH (Germany). Inst. fuer Neutronenphysik und Reaktortechnik; Hasemann, I. [Kernforschungszentrum Karlsruhe GmbH (Germany). Inst. fuer Neutronenphysik und Reaktortechnik; Roedder, P. [Roedder (Peter) Ingenieurberatung, Aachen (Germany)

    1994-03-01

    Within the framework of the approval procedure for conversion from high enriched uranium (HEU, ca. 90% U-235, UAl{sub 4}-Al) to low enriched uranium (LEU, ca. < 20% U-235, U{sub 3}Si{sub 2}-Al, dispersion fuel), a verification was made for the BER II, whether or not and in how far this would have any influence on the previously known potential risk of the research reactor in case of any involvement in the crash of a high-speed military aircraft. In addition to this, the influence of the UFOMOD (effective 1984) and the current COSYMA program systems on an estimate of accident consequences were investigated. For this purpose a LEU source term was determined for activity release in case of a drained, melting core (27.4 fuel rods as compared to 34.4 in a HEU core). Updated accident consequence assessments were also carried out for the former HEU source term. (HP) [Deutsch] Im Rahmen des Genehmigungsverfahrens zur Umstellung von hochangereichertem Uran (HEU, ca. 90% U-235, UAl{sub 4}-Al) auf niedrigangereichertem Uran (LEU, <20% U-235, U{sub 3}Si{sub 2}-Al, Dispersionsbrennstoff) wurde fuer den BER-II geprueft, ob und inwieweit dies Einfluss auf das bisher bekannte Risikopotential des Forschungsreaktors durch Absturz einer schnellfliegenden Militaermaschine hat. Darueberhinaus wurde der Einfluss der Programmsysteme UFOMOD (Stand 1984) und des aktuellen COSYMA auf die Ergebnisse zur Abschaetzung der Unfallfolgen untersucht. Dazu wurde ein LEU-Quellterm fuer die Aktivitaetsfreisetzungen fuer den trockenfallenden schmelzenden Kern (27.4 Brennelemente gebenueber 34.4 in einem HEU-Kern) bestimmt. Aktualisierte Unfallfolgenabschaetzungen wurden auch fuer den frueheren HEU-Quellterm durchgefuehrt. (HP)

  2. Aircraft Propeller Hub Repair

    Energy Technology Data Exchange (ETDEWEB)

    Muth, Thomas R. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Peter, William H. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)

    2015-02-13

    The team performed a literature review, conducted residual stress measurements, performed failure analysis, and demonstrated a solid state additive manufacturing repair technique on samples removed from a scrapped propeller hub. The team evaluated multiple options for hub repair that included existing metal buildup technologies that the Federal Aviation Administration (FAA) has already embraced, such as cold spray, high velocity oxy-fuel deposition (HVOF), and plasma spray. In addition the team helped Piedmont Propulsion Systems, LLC (PPS) evaluate three potential solutions that could be deployed at different stages in the life cycle of aluminum alloy hubs, in addition to the conventional spray coating method for repair. For new hubs, a machining practice to prevent fretting with the steel drive shaft was recommended. For hubs that were refurbished with some material remaining above the minimal material condition (MMC), a silver interface applied by an electromagnetic pulse additive manufacturing method was recommended. For hubs that were at or below the MMC, a solid state additive manufacturing technique using ultrasonic welding (UW) of thin layers of 7075 aluminum to the hub interface was recommended. A cladding demonstration using the UW technique achieved mechanical bonding of the layers showing promise as a viable repair method.

  3. Generic Algorithm with Varying Block Sizes to Improve the Capacity of a Wireless Communications Networks

    Directory of Open Access Journals (Sweden)

    Mahmoud Abdellaoui

    2009-01-01

    Full Text Available Problem statement: Channel capacity can be an essential parameter for wireless communication to improve the link quality. Until now, the channel capacity has been evaluated by utilizing Shannon capacity theory, but it presented many limitations and restrictions. The objectives of this study were to: (i Expose, quantify, present and to give a clear and concise exposition of the mathematical principles of the proposed generic algorithm and (ii Calculate and simulate the SNR, the BER and the channel capacity for wireless underwater transceiver and compare with the literature references. Approach: Contrary to the existing theory (Shannon capacity theory that required and needed of the exact channel state distribution and particularly the precisely estimation of cut-off threshold profile, so, the bad estimation allowed suspending transmission even for good channel conditions, the proposed generic algorithm was used to determine the channel capacity performance with varying block size input packet information (N was varied from 50-200 as a function of the optimum transmit power (from 3.5-7.0 w. This approach did not require the exact channel state distribution; but the channel was well modeled and the cut-off threshold profile had to be numerically solved. The iteration results of this algorithm were utilized to calculate and simulate the SNR, the BER and the channel capacity for wireless underwater transceiver performance. Results: The consultation performance of channel capacity wireless underwater communication, obtained with present approach, were significantly better in any transmission conditions (no suspending transmission because the proposed algorithm was well suited to obtain results about channel capacity. In the other hand, the amount of transmitted data per resource depended on the channel conditions was performed. Blocking is no longer critical if data traffic without or with sensitivity has to be served. Data rate results were allowed

  4. Direct detection and quantification of abasic sites for in vivo studies of DNA damage and repair

    Energy Technology Data Exchange (ETDEWEB)

    Wang Yanming [Division of Radiopharmaceutical Science, Case Center for Imaging Research, Department of Radiology, Case Western Reserve University, Cleveland, OH 44122 (United States)], E-mail: yanming.wang@case.edu; Liu Lili [Department of Hematology and Oncology, Case Comprehensive Cancer Center, Case Western Reserve University, Cleveland, OH 44122 (United States); Wu Chunying [Division of Radiopharmaceutical Science, Case Center for Imaging Research, Department of Radiology, Case Western Reserve University, Cleveland, OH 44122 (United States); Bulgar, Alina [Department of Hematology and Oncology, Case Comprehensive Cancer Center, Case Western Reserve University, Cleveland, OH 44122 (United States); Somoza, Eduardo; Zhu Wenxia [Division of Radiopharmaceutical Science, Case Center for Imaging Research, Department of Radiology, Case Western Reserve University, Cleveland, OH 44122 (United States); Gerson, Stanton L. [Department of Hematology and Oncology, Case Comprehensive Cancer Center, Case Western Reserve University, Cleveland, OH 44122 (United States)

    2009-11-15

    Use of chemotherapeutic agents to induce cytotoxic DNA damage and programmed cell death is a key strategy in cancer treatments. However, the efficacy of DNA-targeted agents such as temozolomide is often compromised by intrinsic cellular responses such as DNA base excision repair (BER). Previous studies have shown that BER pathway resulted in formation of abasic or apurinic/apyrimidinic (AP) sites, and blockage of AP sites led to a significant enhancement of drug sensitivity due to reduction of DNA base excision repair. Since a number of chemotherapeutic agents also induce formation of AP sites, monitoring of these sites as a clinical correlate of drug effect will provide a useful tool in the development of DNA-targeted chemotherapies aimed at blocking abasic sites from repair. Here we report an imaging technique based on positron emission tomography (PET) that allows for direct quantification of AP sites in vivo. For this purpose, positron-emitting carbon-11 has been incorporated into methoxyamine ([{sup 11}C]MX) that binds covalently to AP sites with high specificity. The binding specificity of [{sup 11}C]MX for AP sites was demonstrated by in vivo blocking experiments. Using [{sup 11}C]MX as a radiotracer, animal PET studies have been conducted in melanoma and glioma xenografts for quantification of AP sites. Following induction of AP sites by temozolomide, both tumor models showed significant increase of [{sup 11}C]MX uptake in tumor regions in terms of radioactivity concentration as a function of time, which correlates well with conventional aldehyde reactive probe (ARP)-based bioassays for AP sites.

  5. Nichtlineare Analyse von LC-TANK VCOs unter Berücksichtigung parasitärer Substrateffekte

    Directory of Open Access Journals (Sweden)

    J. Przytarski

    2009-05-01

    Full Text Available In dieser Arbeit wird ein Konzept vorgestellt, die Schaltungsarchitektur des LC-Tank-VCOs im höherdimensionalen Zustandsraum zu modellieren. Dabei wurde die VCO-Schaltung auf dominante nichtlineare und asymmetrische Effekte näher untersucht. Das entwickelte Modell bildet die Grundlage für nachfolgende parameterabhängige Analysen der Oszillatorschaltung mittels der Andronov-Hopf Bifurkationsanalyse. Zu diesem Zweck wurde ein höherdimensionales Modell entwickelt, welches für die Bifurkationsanalyse auf ein System 2. Ordnung reduziert werden muss. Als mathematisches Hilfsmittel zur Ordnungsreduktion des Systems wird das Verfahren der Zentrumsmannigfaltigkeit verwendet. Das Differentialgleichungssystem wird sehr schaltungsnah aufgestellt, daraus resultiert der Vorteil einer genaueren Repräsentation des physikalischen Verhaltens der Schaltung. Ziel ist es möglichst viele Effekte die sich auf das Verhalten des VCOs auswirken können, mit zu berücksichtigen.

  6. Nichtlineare Analyse von LC-TANK VCOs unter Berücksichtigung parasitärer Substrateffekte

    Science.gov (United States)

    Przytarski, J.; Bremer, J.-K.; Mathis, W.

    2009-05-01

    In dieser Arbeit wird ein Konzept vorgestellt, die Schaltungsarchitektur des LC-Tank-VCOs im höherdimensionalen Zustandsraum zu modellieren. Dabei wurde die VCO-Schaltung auf dominante nichtlineare und asymmetrische Effekte näher untersucht. Das entwickelte Modell bildet die Grundlage für nachfolgende parameterabhängige Analysen der Oszillatorschaltung mittels der Andronov-Hopf Bifurkationsanalyse. Zu diesem Zweck wurde ein höherdimensionales Modell entwickelt, welches für die Bifurkationsanalyse auf ein System 2. Ordnung reduziert werden muss. Als mathematisches Hilfsmittel zur Ordnungsreduktion des Systems wird das Verfahren der Zentrumsmannigfaltigkeit verwendet. Das Differentialgleichungssystem wird sehr schaltungsnah aufgestellt, daraus resultiert der Vorteil einer genaueren Repräsentation des physikalischen Verhaltens der Schaltung. Ziel ist es möglichst viele Effekte die sich auf das Verhalten des VCOs auswirken können, mit zu berücksichtigen.

  7. A BER analysis of a space-time signal processing scheme that combines transmitter diversity with beamforming

    Science.gov (United States)

    Kim, Ilhan; Chun, Joohwan

    2003-12-01

    We introduce a new space-time signal processing scheme that uses both transmitter diversity technique and beamforming technique for code-division multiple access (CDMA) systems. The introduced scheme achieves the diversity gain over Rayleigh fading channel through the transmitter diversity technique, and the signal-to-noise ratio (SNR) gain by the beamforming technique. Bit error rate (BER) analyses are given each of the three cases in which the transmitter diversity, beamforming and introduced combined scheme are used, in the frequency-flat Rayleigh fading channel. The analytic results are shown to coincide with the Monte-Carlo simulation results. We show that the combined scheme is more robust to the channel correlation and the speed of mobile than the diversity and beamforming scheme. Furthermore, the combined scheme gives a reduced multiple-access-interference because of its beamforming capability.

  8. Lernen durchs selber tun Über Zeitungs-Workshops und partizipative Zugänge des Kinder-KURIER

    Directory of Open Access Journals (Sweden)

    heinz "kiku" wagner

    2011-12-01

    Full Text Available Trotz Reduktion des (Seiten-Umfangs spielt im Kinder-KURIER die Vermittlung von (Medien-Kompetenz und Empowerment eine große Rolle - in den Zeitungs-Workshops in- und außerhalb der Redaktion. Am Anfang – vor mehr als 20 Jahren nach mehr als zehn Jahren journalistischer Tätigkeit in der ich viel über diskriminierte Gruppen wie Frauen, Migrant_innen, Behinderte, damals noch Umweltbewegte, Radfahrer_innen und eben auch Kinder und Jugendliche geschrieben hatte - stand die Idee: Alle oder die meisten dieser Gruppen haben eigene Medien/Zeitschriften... Kinder/Jugendliche haben dies nicht. Selbst Kinder- und Jugendzeitschriften sind immer nur FÜR, nie bis kaum mit ihnen gemacht. Im Gegensatz zu anderen Gruppen (Frauen-, Behinderten- usw. -Zeitschriften.

  9. Comparison of the Optical Amplifiers EDFA and SOA Based on the BER and Q-Factor in C-Band

    Directory of Open Access Journals (Sweden)

    Tomáš Ivaniga

    2017-01-01

    Full Text Available Currently it is not possible to create a fully optical communication system without a software tool which simulates an optical communication line in real conditions prior to its construction. The aim of this article is to establish a comparison between the EDFA (erbium doped fibre amplifier and SOA (semiconductor optical amplifier optical amplifiers in the WDM (wavelength division multiplexing system. The system contains a four-channel WDM with speed of 10 Gbps and optical fibre with length of 80 km. Simulations are conducted in the programme environment “OptSim.” The quality of the optical communication system is evaluated by the BER (bit error rate and Q-factor for individual wavelengths, namely, of 1558 nm and 1562 nm, which are within the C-band.

  10. Simultaneous chemical modification and structural transformation of Stöber silica spheres for integration of nanocatalysts

    KAUST Repository

    Yao, Kexin

    2012-01-10

    A synthetic approach has been devised to convert conventional Stöber silica (SiO 2) spheres into a new type of porous structural platform for supporting multicomponent catalysts. With this approach, we have first prepared zinc-doped SiO 2 (Zn-SiO 2) hollow spheres, on which zinc oxide (ZnO) phase and ruthenium (Ru) nanoparticles have been deposited and assembled sequentially in solution phase. A series of complex Ru/ZnO/Zn-SiO 2 nanocatalysts has been thus been integrated onto the zinc-doped SiO 2 supports after additional thermal treatment and reduction. To test their workability under harsh reactive environments, we have further evaluated the above prepared catalysts using arene hydrogenation as model reactions. These integrated nanocatalysts have shown superior activity, high robustness, and easy recovery in the studied heterogeneous catalysis. © 2011 American Chemical Society.

  11. Psychometric analysis of Stöber's social desirability scale (SDS-17): an item response theory perspective.

    Science.gov (United States)

    Tran, Ulrich S; Stieger, Stefan; Voracek, Martin

    2012-12-01

    Stöber's Social Desirability Scale (SDS-17) was examined psychometrically in 5 samples (N=2817) from Austria, Canada, and the U.S.A. Rasch and Mokken scaling analyses attested the SDS-17 is not strictly unidimensional. Age, agreeableness, and conscientiousness were notable positive correlates of SDS-17 scores. There were signs of non-normal score distributions, acquiescence bias, and sex and country differences (higher scores among Austrians than North Americans). Items with higher ratings of social desirability according to previous research were particularly prone to show sex effects. The SDS-17 appears suitable in cross-cultural settings, but may benefit from substituting its true-false response format with a rating-scale format. A formative-indicators view regarding the social desirability construct and the SDS-17 is discussed.

  12. Características tecnológicas do processo de trabalho em berçários

    Directory of Open Access Journals (Sweden)

    Semiramis Melani de Melo Rocha

    1999-09-01

    Full Text Available Este estudo analisa, através de uma descrição dos instrumentos de trabalho utilizados no berçário, na assistência ao recém-nascido, as relações que se estabelecem entre os profissionais de saúde e os bebês, mediadas por conhecimentos científicos. Busca, ainda, demonstrar as possibilidades de compreender os nexos entre tecnologia, relações humanas e um cuidado individualizado cujo significado seja a restauração de vitalidade. Trata-se de um estudo exploratório de caráter qualitativo. Os dados foram coletados em dois berçários do município de Ribeirão Preto. De acordo com os agrupamentos feitos, verificou-se que os instrumentos são utilizados na manutenção e controle das funções vitais (termorregulação, cardio-respiratória, oxigenação, equilíbrio hidro-eletrolítico e nutrição, na administração de medicamentos e coleta de materiais orgânicos para diagnóstico e terapêutica. A enfermagem participa do preparo, instalação, controle e manutenção desses equipamentos, enquanto que os médicos envolvem-se com a instalação e controle, especialmente em procedimentos mais invasivos.

  13. Utopia ou distopia? A ansiedade e o vazio em Schimmernder Dunst über CobyCounty de Leif Randt

    Directory of Open Access Journals (Sweden)

    Valéria Sabrina Pereira

    2014-06-01

    Full Text Available Em Schimmernder Dunst über CobyCounty (2011, Leif Randt apresenta um condado que seria a mais perfeita representação de uma utopia consumista: localizado à beira-mar, CobyCounty é um lugar de festas abundantes, consumo e bem-estar. O livro, contudo, é narrado por um jovem atormentado pela possibilidade de uma catástrofe que se aproxima, desde que seu melhor amigo abandonou a cidade, ouvindo os conselhos da mãe que se afiliou a uma religião esotérica. Se a perfeição do funcionamento dessa sociedade se aproxima muito de uma utopia, o temor de uma catástrofe anunciada aproxima a obra de uma distopia. Deve-se notar, no entanto, que, ao contrário de utopias e distopias, a obra não apresenta uma força centralizadora de poder - mesmo que a menção ao consumismo e às propagandas seja frequente. Neste artigo, Schimmernder Dunst über CobyCounty será apresentado à luz dos estudos da utopia e distopia, enfatizando seus laços com o tempo atual, marcado pela dicotomia entre a sociedade de conforto produzida pelo alto desenvolvimento tecnológico e a necessidade de se evitar os excessos produzidos por essa mesma sociedade em nome de uma possível catástrofe ecológica, anunciada por cientistas e ativistas, mas da qual não se percebe o impacto diretamente.

  14. Semi-Automated Diagnosis, Repair, and Rework of Spacecraft Electronics

    Science.gov (United States)

    Struk, Peter M.; Oeftering, Richard C.; Easton, John W.; Anderson, Eric E.

    2008-01-01

    NASA's Constellation Program for Exploration of the Moon and Mars places human crews in extreme isolation in resource scarce environments. Near Earth, the discontinuation of Space Shuttle flights after 2010 will alter the up- and down-mass capacity for the International Space Station (ISS). NASA is considering new options for logistics support strategies for future missions. Aerospace systems are often composed of replaceable modular blocks that minimize the need for complex service operations in the field. Such a strategy however, implies a robust and responsive logistics infrastructure with relatively low transportation costs. The modular Orbital Replacement Units (ORU) used for ISS requires relatively large blocks of replacement hardware even though the actual failed component may really be three orders of magnitude smaller. The ability to perform in-situ repair of electronics circuits at the component level can dramatically reduce the scale of spares and related logistics cost. This ability also reduces mission risk, increases crew independence and improves the overall supportability of the program. The Component-Level Electronics Assembly Repair (CLEAR) task under the NASA Supportability program was established to demonstrate the practicality of repair by first investigating widely used soldering materials and processes (M&P) performed by modest manual means. The work will result in program guidelines for performing manual repairs along with design guidance for circuit reparability. The next phase of CLEAR recognizes that manual repair has its limitations and some highly integrated devices are extremely difficult to handle and demand semi-automated equipment. Further, electronics repairs require a broad range of diagnostic capability to isolate the faulty components. Finally repairs must pass functional tests to determine that the repairs are successful and the circuit can be returned to service. To prevent equipment demands from exceeding spacecraft volume

  15. Nanomaterials promise better bone repair

    Directory of Open Access Journals (Sweden)

    Qifei Wang

    2016-10-01

    Full Text Available Nanomaterials mimicking the nano-features of bones and offering unique smart functions are promising for better bone fracture repair. This review provides an overview of the current state-of-the-art research in developing and using nanomaterials for better bone fracture repair. This review begins with a brief introduction of bone fracture repair processes, then discusses the importance of vascularization, the role of growth factors in bone fracture repair, and the failure of bone fracture repair. Next, the review discusses the applications of nanomaterials for bone fracture repair, with a focus on the recent breakthroughs such as nanomaterials leading to precise immobilization of growth factors at the molecular level, promoting vascularization without the use of growth factors, and re-loading therapeutic agents after implantation. The review concludes with perspectives on challenges and future directions for developing nanomaterials for improved bone fracture repair.

  16. Implementing optical fibres for the structural health monitoring of composite patch repaired structures

    DEFF Research Database (Denmark)

    Karatzas, Vasileios; Kotsidis, Elias A.; Tsouvalis, Nicholas G.

    2017-01-01

    are reflected to the recorded strain measurements, finite element models have been generated. Results indicate that composite patch repairing drastically increased the load bearing capacity of the plates and that optical fibres constitute an appealing health monitoring system for such applications, being able......Structural health monitoring is increasingly being implemented to improve the level of safety of structures and to reduce inspection and repair costs by allowing for correct planning of these actions, if needed. Composite patch repairing presents an appealing alternative to traditional repair...... methods as it enables the reduction of closedown time and the mitigation of complications associated with traditional repair methods. As reinforcement with the use of composite patches is predominantly performed at defected structures, the urge to monitor the performance of the repair becomes even greater...

  17. The DNA base excision repair protein Ape1/Ref-1 as a therapeutic and chemopreventive target.

    Science.gov (United States)

    Fishel, Melissa L; Kelley, Mark R

    2007-01-01

    With our growing understanding of the pathways involved in cell proliferation and signaling, targeted therapies, in the treatment of cancer are entering the clinical arena. New and emerging targets are proteins involved in DNA repair pathways. Inhibition of various proteins in the DNA repair pathways sensitizes cancer cells to DNA damaging agents such as chemotherapy and/or radiation. We study the apurinic endonuclease 1/redox factor-1 (Ape1/Ref-1) and believe that its crucial function in DNA repair and reduction-oxidation or redox signaling make it an excellent target for sensitizing tumor cells to chemotherapy. Ape1/Ref-1 is an essential enzyme in the base excision repair (BER) pathway which is responsible for the repair of DNA caused by oxidative and alkylation damage. As importantly, Ape1/Ref-1 also functions as a redox factor maintaining transcription factors in an active reduced state. Ape1/Ref-1 stimulates the DNA binding activity of numerous transcription factors that are involved in cancer promotion and progression such as AP-1 (Fos/Jun), NFkappaB, HIF-1alpha, CREB, p53 and others. We will discuss what is known regarding the pharmacological targeting of the DNA repair activity, as well as the redox activity of Ape1/Ref-1, and explore the budding clinical utility of inhibition of either of these functions in cancer treatment. A brief discussion of the effect of polymorphisms in its DNA sequence is included because of Ape1/Ref-1's importance to maintenance and integrity of the genome. Experimental modification of Ape1/Ref-1 activity changes the response of cells and of organisms to DNA damaging agents, suggesting that Ape1/Ref-1 may also be a productive target of chemoprevention. In this review, we will provide an overview of Ape1/Ref-1's activities and explore the potential of this protein as a target in cancer treatment as well as its role in chemoprevention.

  18. Production, Purification, and Characterization of 15N-Labeled DNA Repair Proteins as Internal Standards for Mass Spectrometric Measurements

    Science.gov (United States)

    Jaruga, Pawel; Nelson, Bryant C.; Lowenthal, Mark S.; Jemth, Ann-Sofie; Loseva, Olga; Coskun, Erdem; Helleday, Thomas

    2016-01-01

    Oxidatively induced DNA damage is caused in living organisms by a variety of damaging agents, resulting in the formation of a multiplicity of lesions, which are mutagenic and cytotoxic. Unless repaired by DNA repair mechanisms before DNA replication, DNA lesions can lead to genomic instability, which is one of the hallmarks of cancer. Oxidatively induced DNA damage is mainly repaired by base excision repair pathway with the involvement of a plethora of proteins. Cancer tissues develop greater DNA repair capacity than normal tissues by overexpressing DNA repair proteins. Increased DNA repair in tumors that removes DNA lesions generated by therapeutic agents before they became toxic is a major mechanism in the development of therapy resistance. Evidence suggests that DNA repair capacity may be a predictive biomarker of patient response. Thus, knowledge of DNA–protein expressions in disease-free and cancerous tissues may help predict and guide development of treatments and yield the best therapeutic response. Our laboratory has developed methodologies that use mass spectrometry with isotope dilution for the measurement of expression of DNA repair proteins in human tissues and cultured cells. For this purpose, full-length 15N-labeled analogs of a number of human DNA repair proteins have been produced and purified to be used as internal standards for positive identification and accurate quantification. This chapter describes in detail the protocols of this work. The use of 15N-labeled proteins as internal standards for the measurement of several DNA repair proteins in vivo is also presented. PMID:26791985

  19. Regulation of Burkholderia cenocepacia biofilm formation by RpoN and the c-di-GMP effector BerB.

    Science.gov (United States)

    Fazli, Mustafa; Rybtke, Morten; Steiner, Elisabeth; Weidel, Elisabeth; Berthelsen, Jens; Groizeleau, Julie; Bin, Wu; Zhi, Boo Zhao; Yaming, Zhang; Kaever, Volkhard; Givskov, Michael; Hartmann, Rolf W; Eberl, Leo; Tolker-Nielsen, Tim

    2017-08-01

    Knowledge about the molecular mechanisms that are involved in the regulation of biofilm formation is essential for the development of biofilm-control measures. It is well established that the nucleotide second messenger cyclic diguanosine monophosphate (c-di-GMP) is a positive regulator of biofilm formation in many bacteria, but more knowledge about c-di-GMP effectors is needed. We provide evidence that c-di-GMP, the alternative sigma factor RpoN (σ54), and the enhancer-binding protein BerB play a role in biofilm formation of Burkholderia cenocepacia by regulating the production of a biofilm-stabilizing exopolysaccharide. Our findings suggest that BerB binds c-di-GMP, and activates RpoN-dependent transcription of the berA gene coding for a c-di-GMP-responsive transcriptional regulator. An increased level of the BerA protein in turn induces the production of biofilm-stabilizing exopolysaccharide in response to high c-di-GMP levels. Our findings imply that the production of biofilm exopolysaccharide in B. cenocepacia is regulated through a cascade involving two consecutive transcription events that are both activated by c-di-GMP. This type of regulation may allow tight control of the expenditure of cellular resources. © 2017 The Authors. MicrobiologyOpen published by John Wiley & Sons Ltd.

  20. Discontinuous symplectic capacities

    NARCIS (Netherlands)

    Zehmisch, K.; Ziltener, F.J.

    2014-01-01

    We show that the spherical capacity is discontinuous on a smooth family of ellipsoidal shells. Moreover, we prove that the shell capacity is discontinuous on a family of open sets with smooth connected boundaries.

  1. Research on Improving BER Performance of OFDM System%提高OFDM系统误码率性能的研究

    Institute of Scientific and Technical Information of China (English)

    张秀艳; 李卫; 王海生; 李繁荣

    2013-01-01

    The technology of Orthogonal Frequency Division Multiplexing (OFDM) has been applied widely in the transmission of high-speed data,especially in wireless access and mobile communication,where OFDM has very wide perspectives. The commonly used CP-OFDM system decreases channel information capacity because of introducing the cyclic prefix. It studies a new method to implement OFDM,this is OFDM/OQAM,the spectrum of the system better limits in the system bandwidth internal than CP-OFDM system and it can resist various interference better than commonly used OFDM. The fundamental of OFDM/OQAM system was briefly introduced,from using MATLAB software,compare with and analyze the performance between CP-OFDM system and OFDM/OQAM system. At the same time the result of simulation is given. The results indicate that the performance of the OFDM/OQAM system is superior to the tradi-tional OFDM system and has good BER performance.%  正交频分复用(OFDM)技术在高速数据传输中得到了普遍的应用,尤其是在无线接入和移动通信中的应用前景十分广泛。常用的CP-OFDM系统由于在其中加入了循环前缀,则减少了系统信道的信息容量。文中研究了一种最新的实现OFDM的方法,就是OFDM/OQAM,其系统的频谱比 CP-OFDM 系统更好地限制在系统带宽内部,所以能比常用的OFDM更好地消除各种干扰。在介绍了OFDM/OQAM的基本原理之后,利用MATLAB对CP-OFDM系统和OFDM/OQAM系统的性能进行了对比和分析。仿真结果表明,OFDM/OQAM系统的性能优于传统的OFDM系统,并具有良好的误码性能。

  2. Resveratrol mediated cell death in cigarette smoke transformed breast epithelial cells is through induction of p21Waf1/Cip1 and inhibition of long patch base excision repair pathway

    Energy Technology Data Exchange (ETDEWEB)

    Mohapatra, Purusottam; Satapathy, Shakti Ranjan; Das, Dipon; Siddharth, Sumit [Cancer Biology Division, KIIT School of Biotechnology, KIIT University, Campus-11, Patia, Bhubaneswar, Orissa 751024 (India); Choudhuri, Tathagata [Institute of Life Sciences, Nalco Square, Bhubaneswar, Orissa 751023 (India); Department of Biotechnology, Visva Bharati University, Santiniketan, West Bengal (India); Kundu, Chanakya Nath, E-mail: cnkundu@gmail.com [Cancer Biology Division, KIIT School of Biotechnology, KIIT University, Campus-11, Patia, Bhubaneswar, Orissa 751024 (India)

    2014-03-15

    Cigarette smoking is a key factor for the development and progression of different cancers including mammary tumor in women. Resveratrol (Res) is a promising natural chemotherapeutic agent that regulates many cellular targets including p21, a cip/kip family of cyclin kinase inhibitors involved in DNA damage-induced cell cycle arrest and blocking of DNA replication and repair. We have recently shown that cigarette smoke condensate (CSC) prepared from commercially available Indian cigarette can cause neoplastic transformation of normal breast epithelial MCF-10A cell. Here we studied the mechanism of Res mediated apoptosis in CSC transformed (MCF-10A-Tr) cells in vitro and in vivo. Res mediated apoptosis in MCF-10A-Tr cells was a p21 dependent event. It increased the p21 protein expression in MCF-10A-Tr cells and MCF-10A-Tr cells-mediated tumors in xenograft mice. Res treatment reduced the tumor size(s) and expression of anti-apoptotic proteins (e.g. PI3K, AKT, NFκB) in solid tumor. The expressions of cell cycle regulatory (Cyclins, CDC-2, CDC-6, etc.), BER associated (Pol-β, Pol-δ, Pol-ε, Pol-η, RPA, Fen-1, DNA-Ligase-I, etc.) proteins and LP-BER activity decreased in MCF-10A-Tr cells but remain significantly unaltered in isogenic p21 null MCF-10A-Tr cells after Res treatment. Interestingly, no significant changes were noted in SP-BER activity in both the cell lines after Res exposure. Finally, it was observed that increased p21 blocks the LP-BER in MCF-10A-Tr cells by increasing its interaction with PCNA via competing with Fen-1 after Res treatment. Thus, Res caused apoptosis in CSC-induced cancer cells by reduction of LP-BER activity and this phenomenon largely depends on p21. - Highlights: • Resveratrol (Res) caused reduction of MCF-10A-Tr cell growth by inducing apoptosis. • Res caused cell cycle arrest and DNA damage in p21 dependent manner. • Res mediated LP-BER reduction in MCF-10A-Tr cells was a p21 dependent phenomenon. • Res inhibits BER and PI

  3. Responsibility and Capacities

    DEFF Research Database (Denmark)

    Ryberg, Jesper

    2014-01-01

    That responsible moral agency presupposes certain mental capacities, constitutes a widely accepted view among theorists. Moreover, it is often assumed that degrees in the development of the relevant capacities co-vary with degrees of responsibility. In this article it is argued that, the move from...... the view that responsibility requires certain mental capacities to the position that degrees of responsibility co-vary with degrees of the development of the mental capacities, is premature....

  4. Lin28 enhances tissue repair by reprogramming cellular metabolism.

    Science.gov (United States)

    Shyh-Chang, Ng; Zhu, Hao; Yvanka de Soysa, T; Shinoda, Gen; Seligson, Marc T; Tsanov, Kaloyan M; Nguyen, Liem; Asara, John M; Cantley, Lewis C; Daley, George Q

    2013-11-07

    Regeneration capacity declines with age, but why juvenile organisms show enhanced tissue repair remains unexplained. Lin28a, a highly conserved RNA-binding protein expressed during embryogenesis, plays roles in development, pluripotency, and metabolism. To determine whether Lin28a might influence tissue repair in adults, we engineered the reactivation of Lin28a expression in several models of tissue injury. Lin28a reactivation improved hair regrowth by promoting anagen in hair follicles and accelerated regrowth of cartilage, bone, and mesenchyme after ear and digit injuries. Lin28a inhibits let-7 microRNA biogenesis; however, let-7 repression was necessary but insufficient to enhance repair. Lin28a bound to and enhanced the translation of mRNAs for several metabolic enzymes, thereby increasing glycolysis and oxidative phosphorylation (OxPhos). Lin28a-mediated enhancement of tissue repair was negated by OxPhos inhibition, whereas a pharmacologically induced increase in OxPhos enhanced repair. Thus, Lin28a enhances tissue repair in some adult tissues by reprogramming cellular bioenergetics. PAPERCLIP: Copyright © 2013 Elsevier Inc. All rights reserved.

  5. BER performance analysis of OFDM-MIMO system using GNU Radio

    Directory of Open Access Journals (Sweden)

    Singh M.Ushamahesh

    2016-01-01

    Full Text Available Multiple Input Multiple Output (MIMO channels can be used to increase the data rate and the channel capacity by employing multiple transmitting and receiving antennas at both the ends of a wireless communication system. MIMO systems employ Orthogonal Frequency Division Multiplexing (OFDM technique and it uses separate antennas at both the transmitter and receiver to increase the data rate and with OFDM, instead of a single carrier, the main information is modulated into a number of independent sub-carrier signals which are orthogonal to each other. This paper presents an OFDM-MIMO transceiver design and the performance analysis of the system based on Error rate for different modulation techniques using GNU Radio. OFDM is chosen over a single carrier solution due to lower complexity of equalizers for high delay spread channels or high data rates. So the combination of MIMO-OFDM system has become a potential technology for high speed data transmission and efficient utilization of the channel spectrum for the modern wireless communication networks.

  6. Vascular smooth muscle progenitor cells: building and repairing blood vessels.

    Science.gov (United States)

    Majesky, Mark W; Dong, Xiu Rong; Regan, Jenna N; Hoglund, Virginia J

    2011-02-04

    Molecular pathways that control the specification, migration, and number of available smooth muscle progenitor cells play key roles in determining blood vessel size and structure, capacity for tissue repair, and progression of age-related disorders. Defects in these pathways produce malformations of developing blood vessels, depletion of smooth muscle progenitor cell pools for vessel wall maintenance and repair, and aberrant activation of alternative differentiation pathways in vascular disease. A better understanding of the molecular mechanisms that uniquely specify and maintain vascular smooth muscle cell precursors is essential if we are to use advances in stem and progenitor cell biology and somatic cell reprogramming for applications directed to the vessel wall.

  7. Determination of the adaptive response induced In vivo by gamma radiation and its relation with the sensibility to the damage induction in the DNA and with the repairing capacity; Determinacion de la respuesta adaptativa inducida In vivo por radiacion gamma y su relacion con la sensibilidad a la induccion de dano en el ADN y con la capacidad de reparacion

    Energy Technology Data Exchange (ETDEWEB)

    Mendiola C, M.T

    2002-07-01

    The kinetics of damage induction and repair at different doses as well as the adaptive response induced by gamma ray exposure were determined in murine leukocytes in vivo. The damage-repair kinetics were established after the exposure to 0.5, 1.0 or 2.0 Gy in a {sup 137}Cs source. Peripheral blood samples were obtained from the tails of mice, the percentage of damaged cells and the DNA migration in each one were analyzed by the single cell gel electrophoresis (SCG) technique or comet assay. Results indicated that there was an induction of approximately 75% comets with the doses of 1.0 and 2.0 Gy, which was considerably reduced to 22% and 42% respectively during the first 15 minutes. This evidences the presence of a rapid repair process and suggests that leucocytes are genetically well prepared to repair this kind of damage. After 15 minutes, a second increase in the percentage of damaged cells that was proportional to dose occurred, which seems to represent the breaks produced during the repair of other kind of lesions. After that a second reduction was observed, reaching values near to the basal ones, except with the dose of 2.0 Gy. The kinetics obtained with the dose of 0.5 Gy was similar to that established with 1.0 Gy, but in this case the initial damage was 50 % lower. Besides, the adaptive response was observed after the exposure of the mice to an adaptive dose of 0.01 Gy and to a challenge dose of 1.0 Gy 60 minutes later. The pretreatment reduced the percentage of damaged cells caused by the challenge dose to one third approximately, and also diminished this parameter produced during the late repair process. This indicates that the early adaptive response is caused, instead of by an increment in repair, by the induction of a process that protects DNA from damage induction by radiation, i.e synthesis of substances that increase the scavenging of free radicals. (Author)

  8. CDMA systems capacity engineering

    CERN Document Server

    Kim, Kiseon

    2004-01-01

    This new hands-on resource tackles capacity planning and engineering issues that are crucial to optimizing wireless communication systems performance. Going beyond the system physical level and investigating CDMA system capacity at the service level, this volume is the single-source for engineering and analyzing systems capacity and resources.

  9. Repair of DNA lesions induced by ultraviolet irradiation and aromatic amines in normal and repair-deficient human lymphoblastoid cell lines

    DEFF Research Database (Denmark)

    Stevnsner, Tinna; Frandsen, Henrik; Autrup, Herman

    1995-01-01

    A host cell reactivation (HCR) assay was employed to study the capacity of a normal and three repair-deficient human lymphoblastoid cell lines to repair DNA damage induced by UV irradiation and the aromatic amines 2-amino-1-methyl-6-phenylimidazo[4,5-b]pyridine (PhIP) and N-acetyl-2-aminofluorene....... In the XP-D cell line, which had practically no DNA repair capacity, AAF adducts had a more potent inhibitory effect on gene expression than UV and PhIP adducts. When corrected for this inhibitory effect, the wild-type, XP-C and CS-B cell lines repaired low levels of AAF and UV adducts with similar...

  10. Synthetic lethal targeting of DNA double strand break repair deficient cells by human apurinic/apyrimidinic endonuclease (APE1) inhibitors

    Science.gov (United States)

    Sultana, Rebeka; McNeill, Daniel R.; Abbotts, Rachel; Mohammed, Mohammed Z.; Zdzienicka, Małgorzata Z.; Qutob, Haitham; Seedhouse, Claire; Laughton, Charles A.; Fischer, Peter M.; Patel, Poulam M.; Wilson, David M.; Madhusudan, Srinivasan

    2013-01-01

    An apurinic/apyrimidinic (AP) site is an obligatory cytotoxic intermediate in DNA Base Excision Repair (BER) that is processed by human AP endonuclease 1 (APE1). APE1 is essential for BER and an emerging drug target in cancer. We have isolated novel small molecule inhibitors of APE1. In the current study we have investigated the ability of APE1 inhibitors to induce synthetic lethality in a panel of DNA double strand break (DSB) repair deficient and proficient cells; a) Chinese hamster (CH) cells: BRCA2 deficient (V-C8), ATM deficient (V-E5), wild type (V79) and BRCA2 revertant (V-C8(Rev1)). b) Human cancer cells: BRCA1 deficient (MDA-MB-436), BRCA1 proficient (MCF-7), BRCA2 deficient (CAPAN-1 and HeLa SilenciX cells), BRCA2 proficient (PANC1 and control SilenciX cells). We also tested synthetic lethality (SL) in CH ovary cells expressing a dominant–negative form of APE1 (E8 cells) using ATM inhibitors and DNA-PKcs inhibitors (DSB inhibitors). APE1 inhibitors are synthetically lethal in BRCA and ATM deficient cells. APE1 inhibition resulted in accumulation of DNA DSBs and G2/M cell cycle arrest. Synthetic lethality was also demonstrated in CH cells expressing a dominant–negative form of APE1 treated with ATM or DNA-PKcs inhibitors. We conclude that APE1 is a promising synthetic lethality target in cancer. PMID:22377908

  11. Revision of the stiletto fly genera Acupalpa Kröber and Pipinnipons Winterton (Diptera, Therevidae, Agapophytinae) using cybertaxonomic methods, with a key to Australasian genera.

    Science.gov (United States)

    Winterton, Shaun L

    2011-05-04

    Australian stiletto flies of the sister-genera Acupalpa Kröber, 1912 and Pipinnipons Winterton, 2001 (Diptera: Therevidae: Agapophytinae) are revised. Twelve new species of Acupalpa are described, while Acupalpa imitans (White, 1915), comb. n. is transferred from Pipinnipons and Acupalpa albimanis (Kröber, 1914), comb. n. is transferred from Ectinorhynchus Macquart as a senior synonym of Acupalpa pollinosa Mann. The total number of species of Acupalpa is therefore increased to 19: Acupalpa albimanis (Kröber), comb. n., Acupalpa albitarsa Mann, Acupalpa bohartisp. n., Acupalpa divisa (Walker), Acupalpa dolichorhynchasp. n., Acupalpa glossasp. n., Acupalpa imitans (White), comb. n., Acupalpa irwini Winterton, Acupalpa melanophaeossp. n.,Acupalpa miaboolyasp. n., Acupalpa minutasp. n., Acupalpa minutoidessp. n., Acupalpa notomelassp. n., Acupalpa novayamarnasp. n., Acupalpa rostrata Kröber, Acupalpa semirufa Mann, Acupalpa westralicasp. n., Acupalpa yalgoosp. n. and Acupalpa yanchepsp. n. Three new species of Pipinnipons are described, increasing the total number of species to five: Pipinnipons chauncyvallissp. n., Pipinnipons fascipennis (Kröber), Pipinnipons kampmeieraesp. n., Pipinnipons kroeberi Winterton, and P. sphecodasp. n.Pipinnipons and Acupalpa are rediagnosed in light of the new species presented herein and revised keys to species are included. A dichotomous key to genera of Australasian Therevidae is included. As an empirical example of cybertaxonomy, taxonomic descriptions were composed using a character matrix developed in Lucid Builder (in Structured Descriptive Data (SDD) format) to generate natural language descriptions supplemented by online specimen and image databases. Web resources are provided throughout the document including: a) links to high resolution colour images of all species on Morphbank, b) registration of authors, publications, taxon names and other nomenclatural acts in Zoobank, with assignment of Life Science Identifiers (LSIDs

  12. Revision of the stiletto fly genera Acupalpa Kröber and Pipinnipons Winterton (Diptera, Therevidae, Agapophytinae using cybertaxonomic methods, with a key to Australasian genera

    Directory of Open Access Journals (Sweden)

    Shaun Winterton

    2011-05-01

    Full Text Available Australian stiletto flies of the sister-genera Acupalpa Kröber, 1912 and Pipinnipons Winterton, 2001 (Diptera: Therevidae: Agapophytinae are revised. Twelve new species of Acupalpa are described, while Acupalpa imitans (White, 1915, comb. n. is transferred from Pipinnipons and Acupalpa albimanis (Kröber, 1914, comb. n. is transferred from Ectinorhynchus Macquart as a senior synonym of Acupalpa pollinosa Mann. The total number of species of Acupalpa is therefore increased to 19: A. albimanis (Kröber, comb. n., A. albitarsa Mann, A. boharti sp. n., A. divisa (Walker, A. dolichorhyncha sp. n., A. glossa sp. n., A. imitans (White, comb. n., A. irwini Winterton, A. melanophaeos sp. n., A. miaboolya sp. n., A. minuta sp. n., A. minutoides sp. n., A. notomelas sp. n., A. novayamarna sp. n., A. rostrata Kröber, A. semirufa Mann, A. westralica sp. n., A. yalgoo sp. n. and A. yanchep sp. n. Three new species of Pipinnipons are described, increasing the total number of species to five: P. chauncyvallis sp. n., P. fascipennis (Kröber, P. kampmeierae sp. n., P. kroeberi Winterton, and P. sphecoda sp. n. Pipinnipons and Acupalpa are rediagnosed in light of the new species presented herein and revised keys to species are included. A dichotomous key to genera of Australasian Therevidae is included. As an empirical example of cybertaxonomy, taxonomic descriptions were composed using a character matrix developed in Lucid Builder (in Structured Descriptive Data (SDD format to generate natural language descriptions supplemented by online specimen and image databases. Web resources are provided throughout the document including: a links to high resolution colour images of all species on Morphbank, b registration of authors, publications, taxon names and other nomenclatural acts in Zoobank, with assignment of Life Science Identifiers (LSIDs for each, c links to Genbank accession records for DNA sequences, and d assignment of LSIDs to specimen records with links

  13. Mononuclear Cells and Vascular Repair in HHT

    Directory of Open Access Journals (Sweden)

    Calinda eDingenouts

    2015-03-01

    Full Text Available Hereditary hemorrhagic telangiectasia (HHT or Rendu-Osler-Weber disease is a rare genetic vascular disorder known for its endothelial dysplasia causing arteriovenous malformations and severe bleedings. HHT-1 and HHT-2 are the most prevalent variants and are caused by heterozygous mutations in endoglin and ALK1, respectively. An undervalued aspect of the disease is that HHT patients experience persistent inflammation. Although endothelial and mural cells have been the main research focus trying to unravel the mechanism behind the disease, wound healing is a process with a delicate balance between inflammatory and vascular cells. Inflammatory cells are part of the mononuclear cells (MNCs fraction, and can, next to eliciting an immune response, also have angiogenic potential. This biphasic effect of MNC can hold a promising mechanism to further elucidate treatment strategies for HHT patients. Before MNC are able to contribute to repair, they need to home to and retain in ischemic and damaged tissue. Directed migration (homing of mononuclear cells following tissue damage is regulated by the stromal cell derived factor 1 (SDF1. MNCs that express the C-X-C chemokine receptor 4 (CXCR4 migrate towards the tightly regulated gradient of SDF1. This directed migration of monocytes and lymphocytes can be inhibited by dipeptidyl peptidase 4 (DPP4. Interestingly, MNC of HHT patients express elevated levels of DPP4 and show impaired homing towards damaged tissue. Impaired homing capacity of the MNCs might therefore contribute to the impaired angiogenesis and tissue repair observed in HHT patients. This review summarizes recent studies regarding the role of MNCs in the etiology of HHT and vascular repair, and evaluates the efficacy of DPP4 inhibition in tissue integrity and repair.

  14. Channel capacity and digital modulation schemes in correlated Weibull fading channels with nonidentical statistics

    Institute of Scientific and Technical Information of China (English)

    Xiao Hailin; Nie Zaiping; Yang Shiwen

    2007-01-01

    The novel closed-form expressions for the average channel capacity of dual selection diversity is presented, as well as, the bit-error rate (BER) of several coherent and noncoherent digital modulation schemes in the correlated Weibull fading channels with nonidentical statistics.The results are expressed in terms of Meijer's Gfunction, which can be easily evaluated numerically.The simulation results are presented to validate the proposed theoretical analysis and to examine the effects of the fading severity on the concerned quantities.

  15. Isolation of a small molecule inhibitor of DNA base excision repair.

    Science.gov (United States)

    Madhusudan, Srinivasan; Smart, Fiona; Shrimpton, Paul; Parsons, Jason L; Gardiner, Laurence; Houlbrook, Sue; Talbot, Denis C; Hammonds, Timothy; Freemont, Paul A; Sternberg, Michael J E; Dianov, Grigory L; Hickson, Ian D

    2005-01-01

    The base excision repair (BER) pathway is essential for the removal of DNA bases damaged by alkylation or oxidation. A key step in BER is the processing of an apurinic/apyrimidinic (AP) site intermediate by an AP endonuclease. The major AP endonuclease in human cells (APE1, also termed HAP1 and Ref-1) accounts for >95% of the total AP endonuclease activity, and is essential for the protection of cells against the toxic effects of several classes of DNA damaging agents. Moreover, APE1 overexpression has been linked to radio- and chemo-resistance in human tumors. Using a newly developed high-throughput screen, several chemical inhibitors of APE1 have been isolated. Amongst these, CRT0044876 was identified as a potent and selective APE1 inhibitor. CRT0044876 inhibits the AP endonuclease, 3'-phosphodiesterase and 3'-phosphatase activities of APE1 at low micromolar concentrations, and is a specific inhibitor of the exonuclease III family of enzymes to which APE1 belongs. At non-cytotoxic concentrations, CRT0044876 potentiates the cytotoxicity of several DNA base-targeting compounds. This enhancement of cytotoxicity is associated with an accumulation of unrepaired AP sites. In silico modeling studies suggest that CRT0044876 binds to the active site of APE1. These studies provide both a novel reagent for probing APE1 function in human cells, and a rational basis for the development of APE1-targeting drugs for antitumor therapy.

  16. Experiment und Wissensvermittlung. Alexander von Humboldts Darstellungsmethoden in seinen Versuchen über die gereizte Muskel- und Nervenfaser

    Directory of Open Access Journals (Sweden)

    Alexander Stöger

    2016-11-01

    Full Text Available Zusammenfassung Alexander von Humboldt hat sich in jungen Jahren mit galvanischen Experimenten beschäftigt und die Resultate in einem umfassenden, zweibändigen Werk publiziert. Dabei zeigte er nicht nur, dass er als Experimentator und Teil der wissenschaftlichen Gemeinschaft fähig war, sich mit einem so neuen und komplexen Phänomen zu beschäftigen. Es lässt sich auch erkennen, dass er bereits in dieser frühen Schrift versuchte, das umfangreiche Wissen dem Leser zugänglich zu machen. Der Artikel betrachtet Humboldts Galvanismusschrift Versuche über die gereizte Muskel- und Nervenfaser (1797–1798 und untersucht einige Elemente wie Anhänge und Schreibstil, die Humboldt nutzte, um die umfangreichen Informationen zu ordnen und dem Leser so neben den Big Data seiner Erkenntnisse auch passende Suchfunktionen zur Verfügung zu stellen, die eine gezielte Nutzung überhaupt ermöglichen.  Abstract In the early stages of his scientific career, Alexander von Humboldt took an interest in experiments in galvanism. He publicised the results in a two-volume work under the title Versuche über die gereizte Muskel- und Nervenfaser (Experiments on the Stimulated Muscle and Nerve Fibre in 1797 and 1798. In this treatise, he presented himself as competent experimenter and member of the scientific community, but also demonstrated that he was capable of researching new and complex phenomena. These volumes also provide insight into his early attempts to facilitate the readers’ access to the extensive information he had compiled. This article analyses some aspects of Humboldt’s efforts to arrange his vast numbers of observations and theories, for example by means of appendices and narrative style, which he used not only to present the resulting big data collected during his research, but also to make it possible for the reader to organise and utilise this data.   Resumen A temprana edad Alexander von Humboldt se dedicó a galvanismo. En 1797 y 1798

  17. Enhanced cartilage repair in ‘healer’ mice—New leads in the search for better clinical options for cartilage repair

    Science.gov (United States)

    Fitzgerald, Jamie

    2016-01-01

    Adult articular cartilage has a poor capacity to undergo intrinsic repair. Current strategies for the repair of large cartilage defects are generally unsatisfactory because the restored cartilage does not have the same resistance to biomechanical loading as authentic articular cartilage and degrades over time. Recently, an exciting new research direction, focused on intrinsic cartilage regeneration rather than fibrous repair by external means, has emerged. This review explores the new findings in this rapidly moving field as they relate to the clinical goal of restoration of structurally robust, stable and non-fibrous articular cartilage following injury. PMID:27130635

  18. Laparoscopic Repair of Morgagni Hernia

    Directory of Open Access Journals (Sweden)

    ilker murat arer

    2015-03-01

    Full Text Available Morgagni hernia is a congenital herniation of abdominal contents into the thoracic cavity through a retrosternal diaphragmatic defect and make up about 1 % - 5 % of all types of congenital diaphragmatic hernias. Surgical repair of Morgagni hernias is usually indicated when patients are symptomatic and have a high risk of strangulation or incarceration of the contained viscera. 71-year-old male patient admitted to emergency department with a 2-day history of abdominal pain, vomiting and obstipation. Laparoscopic repair for Morgagni hernia was performed. Laparoscopic repair for Morgagni hernia with mesh repair is secure, satisfactory and easily performed. [Cukurova Med J 2015; 40(Suppl 1: 71-74

  19. An Efficient Hybrid Power Control Algorithm for Capacity Improvement of CDMA-based Fixed Wireless Applications

    CERN Document Server

    Zeeshan, Muhammad; Malik, Muhammad Yasir

    2011-01-01

    In Fixed Wireless Applications (FWA), the Code Division Multiple Access (CDMA) is the most promising candidate for wideband data access. The reason is the soft limit on the number of active mobile devices. Many Fixed Wireless Applications impose an upper bound on the BER performance which restricts the increase in number of mobile users. The number of active mobile users or Capacity is further reduced in Multipath Fading Environment (MFE). This paper presents an effective method of improving the capacity of CDMA based Fixed Wireless Networks by using a hybrid power control algorithm. The proposed scheme improves the capacity two times as compared to the conventional CDMA based networks. Simulation results have been presented to demonstrate the effectiveness of the proposed scheme.

  20. A Capacity Improvement Method for CDMA based Mesh Networks in SUI Multipath Fading Channels

    CERN Document Server

    Zeeshan, Muhammad; Malik, Muhammad Yasir

    2011-01-01

    Code Division Multiple Access (CDMA) is the most promising candidate for wideband data access. This is due to the advantage of soft limit on the number of active mobile devices. Many wireless mesh systems impose an upper bound on the BER performance which restricts the increase in number of mobile users. Capacity is further reduced in Multipath Fading Environment (MFE). This paper presents an effective method of improving the capacity of a CDMA based mesh network by managing the transmitted powers of the mobile devices and using MMSE based Multiuser Detection (MUD). The proposed scheme improves the capacity two times as compared to the conventional CDMA based mesh network. Simulation results have been presented to demonstrate the effectiveness of the proposed scheme.

  1. Combinatorial Reliability and Repair

    Science.gov (United States)

    1992-07-01

    Press, Oxford, 1987. [2] G. Gordon and L. Traldi, Generalized activities and the Tutte polynomial , Discrete Math. 85 (1990), 167-176. [3] A. B. Huseby, A...particular, Satyanarayana and Tindell introduced a notion of (K,j)-domination in their study of a K-terminal version of the chromatic polynomial [6], and it...G)) graphs. He also intends to look into the properties of the polynomial that gives the expected number of needed repairs of a K-terminal network

  2. Mammalian mismatch repair

    DEFF Research Database (Denmark)

    Pena Diaz, Javier; Jiricny, Josef

    2012-01-01

    A considerable surge of interest in the mismatch repair (MMR) system has been brought about by the discovery of a link between Lynch syndrome, an inherited predisposition to cancer of the colon and other organs, and malfunction of this key DNA metabolic pathway. This review focuses on recent...... advances in our understanding of the molecular mechanisms of canonical MMR, which improves replication fidelity by removing misincorporated nucleotides from the nascent DNA strand. We also discuss the involvement of MMR proteins in two other processes: trinucleotide repeat expansion and antibody maturation...

  3. Capacity at Railway Stations

    DEFF Research Database (Denmark)

    Landex, Alex

    2011-01-01

    Stations do have other challenges regarding capacity than open lines as it is here the traffic is dispatched. The UIC 406 capacity method that can be used to analyse the capacity consumption can be exposed in different ways at stations which may lead to different results. Therefore, stations need...... special focus when conducting UIC 406 capacity analyses.This paper describes how the UIC 406 capacity method can be expounded for stations. Commonly for the analyses of the stations it is recommended to include the entire station including the switch zone(s) and all station tracks. By including the switch...... is changed, this paper recommends that the railway lines are not always be divided. In case trains turn around on open (single track) line, the capacity consumption may be too low if a railway line is divided. The same can be the case if only few trains are overtaken at an overtaking station. For dead end...

  4. Evaluation of railway capacity

    DEFF Research Database (Denmark)

    Landex, Alex; Kaas, Anders H.; Schittenhelm, Bernd

    2006-01-01

    This paper describes the relatively new UIC 406 method for calculating capacity consumption on railway lines. The UIC 406 method is an easy and effective way of calculating the capacity consumption, but it is possible to expound the UIC 406 method in different ways which can lead to different...... capacity consumptions. This paper describes the UIC 406 method and how it is expounded in Denmark. The paper describes the importance of choosing the right length of the line sections examined and how line sections with multiple track sections are examined. Furthermore, the possibility of using idle...... capacity to run more trains is examined. The paper presents a method to examine the expected capacity utilization of future timetables. The method is based on the plan of operation instead of the exact (known) timetable. At the end of the paper it is described how it is possible to make capacity statements...

  5. ROLE OF MISMATCH REPAIR PROTEINS IN THE PROCESSING OF CISPLATIN INTERSTRAND CROSS-LINKS

    Science.gov (United States)

    Sawant, Akshada; Kothandapani, Anbarasi; Zhitkovich, Anatoly; Sobol, Robert W.; Patrick, Steve M.

    2015-01-01

    Mismatch repair (MMR) deficiency gives rise to cisplatin resistance and can lead to poor prognosis in cancers. Various models have been proposed to explain this low level of resistance caused due to loss of MMR proteins. We have shown that MMR proteins are required to maintain cisplatin interstrand cross-links (ICLs) on the DNA leading to increased cellular sensitivity. In our previous studies, we have shown that BER processing of the cisplatin ICLs is mutagenic. Polymerase β (Polβ) can generate mismatches which leads to the activation and the recruitment of mismatch repair proteins. In this paper, we distinguished between the requirement of different downstream MMR proteins for maintaining cisplatin sensitivity. We show that the MutSα (MSH2-MSH6) heterocomplex is required to maintain cisplatin sensitivity, whereas the Mutsβ complex has no effect. These results can be correlated with the increased repair of cisplatin ICLs and ICL induced DNA double strand breaks (DSBs) in the resistant cells. Moreover, we show that MLH1 proficient cells displayed a cisplatin sensitive phenotype when compared with the MLH1 deficient cells and the ATPase activity of MLH1 is essential to mediate this effect. Based on these results, we propose that MutSα as well as the downstream MMR pathway proteins are essential to maintain a cisplatin sensitive phenotype as a consequence of processing Polβ induced mismatches at sites flanking cisplatin ICLs. PMID:26519826

  6. DNA replication, repair, and repair tests. [Rat; human leukocytes

    Energy Technology Data Exchange (ETDEWEB)

    Lambert, B.

    1980-09-01

    The rate of inhibition and recovery of DNA synthesis can be used in a rapid assay system to detect genotoxic potentials of chemicals. Also, the observation that an agent stimulates DNA repair in a test system indicates its ability to cause damage in DNA. Different experimental approaches to the study of repair synthesis are discussed.

  7. Capacity Building in Vietnam

    OpenAIRE

    Adam McCarty

    2001-01-01

    This report is the outcome of a study commissioned to examine the capacity building needs in Vietnam, and is a supplementary document to the Asian Development Bank's Country Operational Strategy for Vietnam. Vietnam's needs in terms of capacity building are particularly important given that is it a transitional economy and also one with little institutional experience in dealing with the international donor community. This paper examines the international awareness of capacity building and ca...

  8. Internationaler und globaler Diskurs über ethische Grundlagen universaler Rechtsgeltung: Selbstbestimmung als Grundlage oder Verhinderung einer globalen Ethik?

    Directory of Open Access Journals (Sweden)

    Angelika Emmerich-Fritsche

    2012-02-01

    Full Text Available Allgemeinmenschliche Unrechtserfahrungen und globale Gefahren offenbaren die Notwendigkeit und Möglichkeit einer (holistischen universalen ethischen Rechtsbegründung. Ungeachtet der dekonstruktiven Kritik bleiben Diskurs und Konsens bewährte, allgemein anerkannte prozedurale Regeln zur Entdeckung sowie zur Begründung der Verbindlichkeit von Normen. Zur Erkennung eines universalen (und nicht nur internationalen Rechtsgrundes kann sich der Diskurs jedoch nicht auf Staaten und Internationale Organisationen beschränken, sondern muss auch Völker und Individuen (colère publique sowie andere global aktive Rechtssubjekte in das Entdeckungsverfahren einbeziehen. Völkerrechtlich verbindlich anerkannt ist nur eine dünne Schicht universeller Grundnormen (ius cogens. Darüber hinaus haben sich die Menschenrechte als Weltethik etabliert, die staatlicher Willkür entgegentritt und jedenfalls entsprechend dem Leitbild der Allgemeinen Erklärung der Menschenrechte auch mit dem vernunftrechtlichen Ideal eines selbstbestimmten und zugleich sozial eingebundenen Menschen verbunden ist. Dieser ethische internationale Standard beansprucht (neben nicht zu leugnenden realistisch-machtpolitischen Einflüssen die Rechtsetzung in den politischen Foren und institutionalisierten Prozessen der Staaten und internationalen Organisationen zu leiten. Unmittelbar gehen universelle Normen aus welt(zivilgesellschaftlichen (transnationalen Diskursen hervor, insbesondere in den Formen privatautonomer Weltrechtsbildung. Darin sowie im weltweiten Kampf der um Selbstbestimmung ringenden Völker und Menschen gegen Willkürherrschaft manifestiert sich die Emanzipation der Selbstbestimmung von einer abendländischen Errungenschaft zum universellen Recht auf Recht(mitgestaltung als ethische Basis globaler, internationaler und staatlicher Rechtsgeltung.

  9. Quantifying the Q-Factor and Minimizing BER in 32-Channel DWDM System Design Using EDFA and RAMAN Amplifiers

    Directory of Open Access Journals (Sweden)

    Tufail Ahmed Waseer

    2014-01-01

    Full Text Available In this work we have designed, modeled and simulated a 32-channel DWDM (Dense Wavelength Division Multiplexing system using OptiSystem photonic simulator. The system is tested for external transmitter with NRZ (Non-Return Zero encoder using Mech-Zehnder modulator, which accepts input from CW (Continuous Wave laser array and low pass Bessel filter that supports PIN photodiode at receiver end. System performance for optical channels has been compared by varying channel length of EDFA (Erbium Doped Fiber Amplifier and Raman amplifiers to identify its impact in the sense of eye diagram, QF (Quality Factor and minimum BER (Bit Error Rate. Experimental setup was done by varying channel lengths of 60, 100, 120, 150 and 170Kms. It was found that EDFA has better performance in the sub-low ranges of 60Kms, whereas Raman offers better performance at wider channel lengths i.e. more than 100Kms. The proposed work can be extend for the avoidance of amplifier utilization at wider ranged.

  10. Effects of heat treatment on mechanical properties and microstructure of tungsten fi ber reinforced grey cast iron matrix composites

    Directory of Open Access Journals (Sweden)

    Peng jianHong

    2009-11-01

    Full Text Available In this study, grey cast iron matrix composites reinforced by different volume fractions of tungsten fibers (Vr = 0.95 %, 1.90 %, 2.85 %, 3.80 % were investigated in as-cast and under the heat treatment temperatures of 1,000℃ and 1,100℃. The microstructure and mechanical properties of the composites were analyzed and tested by means of SEM, micro-hardness tester and three-point bend testing. The results show that with increasing of the volume fraction of tungsten fibers, the composites reinforced by the tungsten fiber have higher fl exural strength and modulus than that of cast iron without reinforcement, and the fl exural strength increases with the increasing of heat treatment temperatures. Due to diffusion reaction between matrix and reinforcing phases, the process of heat treatment, the number of graphite fl akes in the matrix seemingly becomes lower; and some hard carbide particles are formed around the residual tungsten fi bers. Not only does the hardness of both matrix and reinforcement change tremendously, but also the region of reinforcement is also extended from the original 0.11 mm to 0.19 mm in radius.

  11. Tutorium Quantenfeldtheorie was Sie schon immer über QFT wissen wollten, aber bisher nicht zu fragen wagten

    CERN Document Server

    Edelhäuser, Lisa

    2016-01-01

    Dieses Buch richtet sich an alle, die sich schon immer gefragt haben, wie die kanonische Quantisierung, die LSZ-Reduktionsformel, Pfadintegrale, Feynman-Graphen und die Renormierung miteinander zusammenhängen. Als locker geschriebene Begleitlektüre zu Vorlesungen über Quantenfeldtheorie oder zum Selbststudium geeignet, gibt sich das Buch gesprächig und liefert Rechentricks und Erklärungen, die für Einsteiger sehr hilfreich sind. Im ersten Teil werden anhand von Skalarfeldern grundlegende Konzepte von der klassischen Feldtheorie bis zur Renormierung eingeführt. Der zweite Teil verallgemeinert diese für Felder mit Spin und legt mit der Einführung des Eichprinzips die Grundlagen für den dritten Teil. Hier werden „Anwendungen auf die reale Welt“ behandelt: Die Quantenelektrodynamik und ihre Renormierung, sowie das Standardmodell der Teilchenphysik und der Higgs-Mechanismus. Durch ausführlich vorgerechnete und in den Text eingebundene Aufgaben eignet sich das Tutorium sowohl zum schnellen Nachschla...

  12. Synthesis of copper-containing bioactive glass nanoparticles using a modified Stöber method for biomedical applications.

    Science.gov (United States)

    Zheng, Kai; Dai, Xinyi; Lu, Miao; Hüser, Norbert; Taccardi, Nicola; Boccaccini, Aldo R

    2017-02-01

    Copper (Cu)-containing bioactive glasses (BGs) are attracting attention for bone regeneration and wound healing since they have bone-bonding capability and potential osteogenesis and angiogenesis properties. In this study, highly dispersed and spherical Cu-containing bioactive glass nanoparticles (Cu-BGNs) were successfully synthesized via a modified Stöber method. The content of incorporated Cu in the particles could be tailored by adjusting the amount of the added Cu precursor, a procedure that had no significant effects on the morphological and structural characteristics of the nanoparticles. Cu-BGNs exhibited satisfactory apatite-forming ability, as a large quantity of apatite could form on Cu-BGNs pellets after immersion in simulated body fluid for just 3days. The incorporation of Cu exhibited positive effects on the apatite formation. In addition, both Si and Cu ions were released from the Cu-BGN in a sustained manner for at least 14days in cell culture medium, indicating the potential of the BGN as promising carriers for delivering therapeutic Cu ions. Moreover, Cu-BGNs showed no significant cytotoxicity towards human mesenchymal stem cells and fibroblast cells at concentrations of 100, 10 and 1μg/mL. Taken together, the results suggest that Cu-BGNs are promising nanoparticulate fillers to develop nanocomposites for biomedical applications especially in bone regeneration and wound healing. Copyright © 2016 Elsevier B.V. All rights reserved.

  13. Biologics for tendon repair.

    Science.gov (United States)

    Docheva, Denitsa; Müller, Sebastian A; Majewski, Martin; Evans, Christopher H

    2015-04-01

    Tendon injuries are common and present a clinical challenge to orthopedic surgery mainly because these injuries often respond poorly to treatment and require prolonged rehabilitation. Therapeutic options used to repair ruptured tendons have consisted of suture, autografts, allografts, and synthetic prostheses. To date, none of these alternatives has provided a successful long-term solution, and often the restored tendons do not recover their complete strength and functionality. Unfortunately, our understanding of tendon biology lags far behind that of other musculoskeletal tissues, thus impeding the development of new treatment options for tendon conditions. Hence, in this review, after introducing the clinical significance of tendon diseases and the present understanding of tendon biology, we describe and critically assess the current strategies for enhancing tendon repair by biological means. These consist mainly of applying growth factors, stem cells, natural biomaterials and genes, alone or in combination, to the site of tendon damage. A deeper understanding of how tendon tissue and cells operate, combined with practical applications of modern molecular and cellular tools could provide the long awaited breakthrough in designing effective tendon-specific therapeutics and overall improvement of tendon disease management.

  14. Kvitebjoern gas pipeline repair - baptism of remote pipeline repair system

    Energy Technology Data Exchange (ETDEWEB)

    Gjertveit, Erling

    2010-07-01

    On the 1st of November 2007, severe anchor damage was discovered on the 30 inch Kvitebjoern gas export pipeline. The damage constituted a localised dent and a 17deg buckle, but no leakage. Statoil has invested in building an effective repair contingency structure for the large pipeline network on the Norwegian Continental shelf, with particular focus on the large gas export pipelines. The repair method for the Kvitebjoern pipeline was remotely operated using two Morgrip couplings and a spool. The installation used the purpose built Pipeline Repair System stored at Killingoey and couplings produced and tested back in 2005. This presentation will cover the initial damage investigations, the temporary operational phase, the repair preparations, the actual repair and lessons learned. (Author)

  15. DNA damage and radical reactions: Mechanistic aspects, formation in cells and repair studies

    Energy Technology Data Exchange (ETDEWEB)

    Cadet, J.; Ravanat, J.L. [CEA Grenoble, Inst Nanosci and Cryogenie, SCIB-UMR-E 3, Lab Les Acides Nucl, UJF, F-38054 Grenoble 9 (France); Carell, T. [Univ Munich, Dept Chem and Biochem, Ctr Integrat Prot Sci, D-81377 Munich (Germany); Cellai, L. [CNR, Ist Cristalog, Monterotondo Stn, I-00016 Rome (Italy); Chatgilialoglu, Ch. [CNR, ISOF, I-40129 Bologna, (Italy); Gimisis, Th. [Univ Athens, Dept Chem, Organ Chem Lab, Athens 15784, (Greece); Miranda, M. [Univ Politecn Valencia, Inst Technol Quim, Dept Quim, Valencia 46022 (Spain); O' Neill, P. [Univ Oxford, Oxford OX3 7DQ (United Kingdom); Robert, M. [Univ Paris 07, CNRS, UMR 7591, Electrochim Mol Lab, F-75251 Paris 05 (France)

    2008-07-01

    Several examples of oxidative and reductive reactions of DNA components that lead to single and tandem modifications are discussed in this review. These include nucleophilic addition reactions of the one-electron oxidation-mediated guanine radical cation and the one-electron reduced intermediate of 8-bromo-purine 2'-de-oxy-ribo-nucleosides that give rise to either an oxidizing guanine radical or related 5',8-cyclo-purine nucleosides. In addition, mechanistic insights into the reductive pathways involved in the photolyase induced reversal of cyclo-buta-cli-pyrimidine and pyrimidine (6-4) pyrimidone photoproducts are provided. Evidence for the occurrence and validation in cellular DNA of (OH){sup {center_dot}} radical degradation pathways of guanine that have been established in model systems has been gained from the accurate measurement of degradation products. Relevant information on biochemical aspects of the repair of single and clustered oxidatively generated damage to DNA has been gained from detailed investigations that rely on the synthesis of suitable modified probes. Thus the preparation of stable carbocyclic derivatives of purine nucleoside containing defined sequence oligonucleotides has allowed detailed crystallographic studies of the recognition step of the base damage by enzymes implicated in the base excision repair (BER) pathway. Detailed insights are provided on the BER processing of non-double strand break bi-stranded clustered damage that may consist of base lesions, a single strand break or abasic sites and represent one of the main deleterious classes of radiation-induced DNA damage. (authors)

  16. Handbook of adhesive bonded structural repair

    CERN Document Server

    Wegman, Raymond F

    1992-01-01

    Provides repair methods for adhesive bonded and composite structures; identifies suitable materials and equipment for repairs; describes damage evaluation criteria and techniques, and methods of inspection before and after repair.

  17. Clamp wins pipe repair prize

    Energy Technology Data Exchange (ETDEWEB)

    Anon.

    2001-04-01

    This paper describes the permanent pipeline repair system, developed by Tekmar, which is powered by seawater hydraulics and is easily installed and tested by any workclass remotely operated vehicle (rov). Details are given of the two main components of the system, namely, the diverless high pressure split repair clamp and the rov-operated tool to install it.

  18. The journey of DNA repair

    OpenAIRE

    Saini, Natalie

    2015-01-01

    21 years ago, the DNA Repair Enzyme was declared “Molecule of the Year”. Today, we are celebrating another “year of repair”, with the 2015 Nobel Prize in Chemistry being awarded to Aziz Sancar, Tomas Lindahl and Paul Modrich for their collective work on the different DNA repair pathways.

  19. Nucleotide excision repair in yeast

    NARCIS (Netherlands)

    Eijk, Patrick van

    2012-01-01

    Nucleotide Excision Repair (NER) is a conserved DNA repair pathway capable of removing a broad spectrum of DNA damage. In human cells a defect in NER leads to the disorder Xeroderma pigmentosum (XP). The yeast Saccharomyces cerevisiae is an excellent model organism to study the mechanism of NER. The

  20. Genetic and environmental influence on DNA strand break repair: a twin study

    DEFF Research Database (Denmark)

    Garm, Christian; Moreno-Villanueva, Maria; Bürkle, Alexander

    2013-01-01

    factors are likely to influence DNA repair capacity. In order to gain more insight into the genetic and environmental contribution to the molecular basis of DNA repair, we have performed a human twin study, where we focused on the consequences of some of the most abundant types of DNA damage (single......Accumulation of DNA damage deriving from exogenous and endogenous sources has significant consequences for cellular survival, and is implicated in aging, cancer, and neurological diseases. Different DNA repair pathways have evolved in order to maintain genomic stability. Genetic and environmental......-strand breaks), and some of the most hazardous lesions (DNA double-strand breaks). DNA damage signaling response (Gamma-H2AX signaling), relative amount of endogenous damage, and DNA-strand break repair capacities were studied in peripheral blood mononuclear cells from 198 twins (94 monozygotic and 104...

  1. The role of base excision repair in the development of primary open angle glaucoma in the Polish population

    Energy Technology Data Exchange (ETDEWEB)

    Cuchra, Magda; Markiewicz, Lukasz; Mucha, Bartosz [Department of Clinical Chemistry and Biochemistry, Medical University of Lodz (Poland); Pytel, Dariusz [The Abramson Family Cancer Research Institute, Department of Cancer Biology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104 (United States); Department of Biochemistry and Molecular Biology, Hollings Cancer Center, Medical University of South Carolina, Charleston, SC 29425 (United States); Szymanek, Katarzyna [Department of Ophthalmology, Medical University of Warsaw, SPKSO Hospital, Warsaw (Poland); Szemraj, Janusz [Department of Medical Biochemistry, Medical University of Lodz, Lodz (Poland); Szaflik, Jerzy; Szaflik, Jacek P. [Department of Ophthalmology, Medical University of Warsaw, SPKSO Hospital, Warsaw (Poland); Majsterek, Ireneusz, E-mail: ireneusz.majsterek@umed.lodz.pl [Department of Clinical Chemistry and Biochemistry, Medical University of Lodz (Poland)

    2015-08-15

    Highlights: • We suggested the association of XRCC1 gene with the increase risk of POAG development. • We indicated the association of clinical factor and XRCC1, MUTYH, ADPRT and APE1 genes with POAG progression. • We postulated the increase level of oxidative DNA damage in group of patients with POAG in relation to healthy controls. • We suggested the slightly decrease ability to repair of oxidative DNA damage. • This is the first data that showed the role of BER mechanism in POAG pathogenesis. - Abstract: Glaucoma is a leading cause of irreversible blindness in developing countries. Previous data have shown that progressive loss of human TM cells may be connected with chronic exposure to oxidative stress. This hypothesis may suggest a role of the base excision repair (BER) pathway of oxidative DNA damage in primary open angle glaucoma (POAG) patients. The aim of our study was to evaluate an association of BER gene polymorphism with a risk of POAG. Moreover, an association of clinical parameters was examined including cup disk ratio (c/d), rim area (RA) and retinal nerve fiber layer (RNFL) with glaucoma progression according to BER gene polymorphisms. Our research included 412 patients with POAG and 454 healthy controls. Gene polymorphisms were analyzed by PCR-RFLP. Heidelberg Retinal Tomography (HRT) clinical parameters were also analyzed. The 399Arg/Gln genotype of the XRCC1 gene (OR 1.38; 95% CI 1.02–1.89 p = 0.03) was associated with an increased risk of POAG occurrence. It was indicated that the 399Gln/Gln XRCC1 genotype might increase the risk of POAG progression according to the c/d ratio (OR 1.67; 95% CI 1.07–2.61 P = 0.02) clinical parameter. Moreover, the association of VF factor with 148Asp/Glu of APE1 genotype distribution and POAG progression (OR 2.25; 95% CI 1.30–3.89) was also found. Additionally, the analysis of the 324Gln/His MUTYH polymorphism gene distribution in the patient group according to RNFL factor showed that it might

  2. DNA-damage foci to detect and characterize DNA repair alterations in children treated for pediatric malignancies.

    Directory of Open Access Journals (Sweden)

    Nadine Schuler

    Full Text Available PURPOSE: In children diagnosed with cancer, we evaluated the DNA damage foci approach to identify patients with double-strand break (DSB repair deficiencies, who may overreact to DNA-damaging radio- and chemotherapy. In one patient with Fanconi anemia (FA suffering relapsing squamous cell carcinomas of the oral cavity we also characterized the repair defect in biopsies of skin, mucosa and tumor. METHODS AND MATERIALS: In children with histologically confirmed tumors or leukemias and healthy control-children DSB repair was investigated by counting γH2AX-, 53BP1- and pATM-foci in blood lymphocytes at defined time points after ex-vivo irradiation. This DSB repair capacity was correlated with treatment-related normal-tissue responses. For the FA patient the defective repair was also characterized in tissue biopsies by analyzing DNA damage response proteins by light and electron microscopy. RESULTS: Between tumor-children and healthy control-children we observed significant differences in mean DSB repair capacity, suggesting that childhood cancer is based on genetic alterations affecting DNA repair. Only 1 out of 4 patients with grade-4 normal-tissue toxicities revealed an impaired DSB repair capacity. The defective DNA repair in FA patient was verified in irradiated blood lymphocytes as well as in non-irradiated mucosa and skin biopsies leading to an excessive accumulation of heterochromatin-associated DSBs in rapidly cycling cells. CONCLUSIONS: Analyzing human tissues we show that DSB repair alterations predispose to cancer formation at younger ages and affect the susceptibility to normal-tissue toxicities. DNA damage foci analysis of blood and tissue samples allows one to detect and characterize DSB repair deficiencies and enables identification of patients at risk for high-grade toxicities. However, not all treatment-associated normal-tissue toxicities can be explained by DSB repair deficiencies.

  3. Non-linear propagation of laser beam and focusing due to self-action in optical fiber: Non-paraxial approach

    Indian Academy of Sciences (India)

    R K Khanna; R C Chouhan

    2003-10-01

    A somewhat more general analysis for solving spatial propagation characteristics of intense Gaussian beam is presented and applied to the laser beam propagation in step-index profile as well as parabolic profile dielectric fibers with Kerr non-linearity. Considering self-action due to saturating and non-saturating non-linearity in the refractive index, a general theory has been developed without any kind of power series expansion for the dielectric constant as is usually done in other theories that make use of paraxial approximation. Result of the steady state self-focusing analysis indicates that the Kerr non-linearity acts as a perturbation on the radial inhomogeneity due to fiber geometry. Analysis indicates that the paraxial rays and peripheral rays focus at different points, indicating aberration effect. Calculated critical power matches with the experimentally reported result.

  4. BER performance of MSK in ground-to-satellite uplink optical communication under the influence of atmospheric turbulence and detector noise.

    Science.gov (United States)

    Ding, Jiachen; Li, Mi; Tang, Minghui; Li, Yan; Song, Yuejiang

    2013-09-15

    Minimum shift keying (MSK) has been widely used in fiber optical communication and free-space optical communication. In order to introduce MSK into satellite laser communication, the bit-error rate (BER) performance of the MSK scheme is investigated in uplink communications under the influence of atmospheric turbulence consisting of weak fluctuation and beam wander. Numerical results indicate that the BER performance of MSK is much better than the performance of on-off keying (OOK). With the laser power being 4 W, the improvement is 5 dB in coherent demodulation and 15 dB in delay coherent demodulation. Furthermore, compared with OOK, optimal values of the divergence angle, receiver diameter, and transmitter beam radius are easier and more practical to achieve in the MSK scheme. The work can benefit ground-to-satellite laser uplink communication system design.

  5. BER of Wireless Sensor Network Based on CDMA%基于CDMA的无线传感器网络误码率分析

    Institute of Scientific and Technical Information of China (English)

    段廷勇; 胡兵

    2011-01-01

    The multiple access interference (MAD and node interference (NI) are evaluated based on CDMA in wireless sensor network (WSN).The effects of transmission distance, rate, shadowed environment, node density are considered, and the bit error rate (BER) is simulated by Matlab.The simulation results indicate that CDMA can be used for saving energy and reducing interference in physical layer.%为了分析多址干扰和节点干扰对CDMA无线传感器网络的影响,在考虑传输距离、传输速率、阴影效应、节点密度等影响的基础上,通过Matlab对误码率(BER)进行了仿真.仿真结果表明,CDMA在物理层对抵抗干扰和节约能量具有良好的性能.

  6. Rethinking transcription coupled DNA repair.

    Science.gov (United States)

    Kamarthapu, Venu; Nudler, Evgeny

    2015-04-01

    Nucleotide excision repair (NER) is an evolutionarily conserved, multistep process that can detect a wide variety of DNA lesions. Transcription coupled repair (TCR) is a subpathway of NER that repairs the transcribed DNA strand faster than the rest of the genome. RNA polymerase (RNAP) stalled at DNA lesions mediates the recruitment of NER enzymes to the damage site. In this review we focus on a newly identified bacterial TCR pathway in which the NER enzyme UvrD, in conjunction with NusA, plays a major role in initiating the repair process. We discuss the tradeoff between the new and conventional models of TCR, how and when each pathway operates to repair DNA damage, and the necessity of pervasive transcription in maintaining genome integrity. Copyright © 2015 Elsevier Ltd. All rights reserved.

  7. Augmentation of Rotator Cuff Repair With Soft Tissue Scaffolds

    OpenAIRE

    2015-01-01

    Background Tears of the rotator cuff are one of the most common tendon disorders. Treatment often includes surgical repair, but the rate of failure to gain or maintain healing has been reported to be as high as 94%. This has been substantially attributed to the inadequate capacity of tendon to heal once damaged, particularly to bone at the enthesis. A number of strategies have been developed to improve tendon-bone healing, tendon-tendon healing, and tendon regeneration. Scaffolds have receive...

  8. Liquid heat capacity lasers

    Science.gov (United States)

    Comaskey, Brian J.; Scheibner, Karl F.; Ault, Earl R.

    2007-05-01

    The heat capacity laser concept is extended to systems in which the heat capacity lasing media is a liquid. The laser active liquid is circulated from a reservoir (where the bulk of the media and hence waste heat resides) through a channel so configured for both optical pumping of the media for gain and for light amplification from the resulting gain.

  9. Visual attention capacity

    DEFF Research Database (Denmark)

    Habekost, Thomas; Starrfelt, Randi

    2009-01-01

    to patient testing, and review existing TVA-based patient studies organized by lesion anatomy. Lesions in three anatomical regions affect visual capacity: The parietal lobes, frontal cortex and basal ganglia, and extrastriate cortex. Visual capacity thus depends on large, bilaterally distributed anatomical...

  10. Initial steps of the base excision repair pathway within the nuclear architecture; Les etapes initiales du mecanisme de reparation par excision de bases au sein de l'architecture nucleaire

    Energy Technology Data Exchange (ETDEWEB)

    Amouroux, R

    2009-09-15

    Oxidative stress induced lesions threaten aerobic organisms by representing a major cause of genomic instability. A common product of guanine oxidation, 8-oxo-guanine (8- oxoG) is particularly mutagenic by provoking G to T transversions. Removal of oxidised bases from DNA is initiated by the recognition and excision of the damaged base by a DNA glycosylase, initiating the base excision repair (BER) pathway. In mammals, 8-oxoG is processed by the 8-oxoG-DNA-glycosylase I (OGG1), which biochemical mechanisms has been well characterised in vitro. However how and where this enzyme finds the modified base within the complex chromatin architecture is not yet understood. We show that upon induction of 8-oxoG, OGG1, together with at least two other proteins involved in BER, is recruited from a soluble fraction to chromatin. Formation kinetics of this patches correlates with 8-oxoG excision, suggesting a direct link between presence of this chromatin-associated complexes and 8-oxoG repair. More precisely, these repair patches are specifically directed to euchromatin regions, and completely excluded from heterochromatin regions. Inducing of artificial chromatin compaction results in a complete inhibition of the in vivo repair of 8-oxoG, probably by impeding the access of OGG1 to the lesion. Using OGG1 mutants, we show that OGG1 direct recognition of 8-oxoG did not trigger its re-localisation to the chromatin. We conclude that in response to the induction of oxidative DNA damage, the DNA glycosylase is actively recruited to regions of open chromatin allowing the access of the BER machinery to the lesions. (author)

  11. Value for railway capacity

    DEFF Research Database (Denmark)

    Sameni, Melody Khadem; Preston, John M.

    2012-01-01

    Growth in rail traffic has not been matched by increases in railway infrastructure. Given this capacity challenge and the current restrictions on public spending, the allocation and the utilization of existing railway capacity are more important than ever. Great Britain has had the greatest growth...... in rail passenger kilometers of European countries since 1996. However, costs are higher and efficiency is lower than European best practice. This paper provides an innovative methodology for assessing the efficiency of passenger operators in capacity utilization. Data envelopment analysis (DEA) is used...... to analyze the efficiency of operators in transforming inputs of allocated capacity of infrastructure and franchise payments into valuable passenger service outputs while avoiding delays. By addressing operational and economic aspects of capacity utilization simultaneously, the paper deviates from existing...

  12. Online-Dienstleistung als Herausforderung für AnbieterInnen unter besonderer Berücksichtigung der Situation in Österreich

    Directory of Open Access Journals (Sweden)

    Birgit Kollek

    2006-03-01

    Full Text Available Online-Beratung findet zunehmend auch im Dienstleistungssektor statt und damit nicht mehr nur im psychosozialen Beratungskontext. Gerade die Interaktivität des Mediums Internet macht dabei den Reiz für AnbieterInnen aus, die Dienstleistungsangebote auch im virtuellen Raum den KundInnen anzubieten. Der Artikel beleuchtet die notwendigen Schritte und Sichtweisen für eine professionelle Projektplanung solcher Angebote im Internet unter besonderer Berücksichtigung der Situation in Österreich.

  13. Maßnahmen zur kontrollierten Generierung von organischen Nanopartikeln in einer übersättigten Gasströmung

    OpenAIRE

    Voigt, Tino

    2009-01-01

    Die vorliegende Arbeit befasst sich mit der Generierung von organischen Nanopartikeln in einer übersättigten Gasströmung. Als Versuchsmaterialien kamen Kupferphthalocyanin und Paliogen Rot L4120 zum Einsatz. Sie werden bereits erfolgreich in der Informations- und Kommunikationstechnologie als Bestandteil in Halbleiterbaugruppen oder organischen Leuchtdioden eingesetzt. Gerade in solchen Anwendungsgebieten ist eine hohe Reinheit der Materialien unerlässlich. Gasphasenprozesse bieten diesen Vor...

  14. Preparation of chitin–silica composites by in vitro silicification of two-dimensional Ianthella basta demosponge chitinous scaffolds under modified Stöber conditions

    Energy Technology Data Exchange (ETDEWEB)

    Wysokowski, Marcin [Institute of Chemical Technology and Engineering, Faculty of Chemical Technology, Poznan University of Technology, M. Skłodowskiej-Curie 2, PL-60965 Poznan (Poland); Behm, Thomas [Institute of Experimental Physics, TU Bergakademie Freiberg, Liepziger 23, 09599 Freiberg (Germany); Born, René [Institute of Materials Science, Dresden University of Technology, Helmholtzstraße 10, 01069 Dresden (Germany); Bazhenov, Vasilii V. [Institute of Experimental Physics, TU Bergakademie Freiberg, Liepziger 23, 09599 Freiberg (Germany); Meißner, Heike; Richter, Gert [Faculty of Medicine Carl Gustav Carus, Dresden University of Technology, Fetscherstraße 74, 01307 Dresden (Germany); Szwarc-Rzepka, Karolina [Institute of Chemical Technology and Engineering, Faculty of Chemical Technology, Poznan University of Technology, M. Skłodowskiej-Curie 2, PL-60965 Poznan (Poland); Makarova, Anna; Vyalikh, Denis [Institute of Solid State Physics, Dresden University of Technology, Helmholtzstraße 10, 01069 Dresden (Germany); Schupp, Peter [Institute for Chemistry and Biology of the Marine Environment, University of Oldenburg, Emsstr. 20, 26382 Wilhelmshaven (Germany); Jesionowski, Teofil, E-mail: teofil.jesionowski@put.poznan.pl [Institute of Chemical Technology and Engineering, Faculty of Chemical Technology, Poznan University of Technology, M. Skłodowskiej-Curie 2, PL-60965 Poznan (Poland); Ehrlich, Hermann, E-mail: hermann.ehrlich@physik.tu-freiberg.de [Institute of Experimental Physics, TU Bergakademie Freiberg, Liepziger 23, 09599 Freiberg (Germany)

    2013-10-15

    Chitin is a biopolymer found in cell walls of various fungi and skeletal structures of numerous invertebrates. The occurrence of chitin within calcium- and silica-containing biominerals has inspired development of chitin-based hybrids and composites in vitro with specific physico-chemical and material properties. We show here for the first time that the two-dimensional α-chitin scaffolds isolated from the skeletons of marine demosponge Ianthella basta can be effectively silicified by the two-step method with the use of Stöber silica micro- and nanodispersions under Extreme Biomimetic conditions. The chitin–silica composites obtained at 120 °C were characterized by the presence of spherical SiO{sub 2} particles homogeneously distributed over the chitin fibers, which probably follows from the compatibility of Si–OH groups to the hydroxyl groups of chitin. The biocomposites obtained were characterized by various analytical techniques such as energy dispersive spectrometry, scanning electron microscopy, thermogravimetric/differential thermal analyses as well as X-ray photoelectron spectroscopy, Fourier transform infrared and Raman spectroscopy to determine possible interactions between silica and chitin molecule. The results presented proved that the character and course of the in vitro chitin silicification in Stöber dispersions depended considerably on the degree of hydrolysis of the SiO{sub 2} precursor. - Highlights: • 2D α-chitin scaffolds isolated from marine demosponge can be effectively silicified using Stöber silica. • The chitin–silica composites were obtained under Extreme Biomimetic conditions. • Character and course of the in vitro chitin silicification in Stöber dispersions is discussed.

  15. FODMAP-arme Diät bei Reizdarmsyndrom: Literaturübersicht und Pilotstudie über Österreich-adaptierte Diät

    OpenAIRE

    Auer A; Pail E; Toplak H; Hammer J; Betz C; Hammer HF

    2016-01-01

    Hintergrund: Die FODMAP-arme Diät beruht auf dem Konzept einer Reduzierung von fermentierbaren, kurzkettigen Kohlenhydraten in der Ernährung mit dem Effekt, unspezifische gastrointestinale Symptome vorrangig bei Reizdarmsydrom (RDS) zu mildern. Methode: Eine unsystematische Literaturrecherche und ein Pilotprojekt mit einer Diät, welche österreichische Ernährungsgewohnheiten berücksichtigte, wurden durchgeführt. 10 Patienten mit abdominellen Symptomen (laut ROM-III-Kriterien) wurden im ...

  16. Comparative DNA Damage and Repair in Echinoderm Coelomocytes Exposed to Genotoxicants

    OpenAIRE

    El-Bibany, Ameena H.; Bodnar, Andrea G.; Reinardy, Helena C.

    2014-01-01

    The capacity to withstand and repair DNA damage differs among species and plays a role in determining an organism's resistance to genotoxicity, life history, and susceptibility to disease. Environmental stressors that affect organisms at the genetic level are of particular concern in ecotoxicology due to the potential for chronic effects and trans-generational impacts on populations. Echinoderms are valuable organisms to study the relationship between DNA repair and resistance to genotoxic st...

  17. Reward optimization of a repairable system

    Energy Technology Data Exchange (ETDEWEB)

    Castro, I.T. [Departamento de Matematicas, Facultad de Veterinaria, Universidad de Extremadura, Avenida de la Universidad, s/n. 10071 Caceres (Spain)]. E-mail: inmatorres@unex.es; Perez-Ocon, R. [Departamento de Estadistica e Investigacion Operativa, Facultad de Ciencias, Universidad de Granada, Avenida de Severo Ochoa, s/n. 18071 Granada (Spain)]. E-mail: rperezo@ugr.es

    2006-03-15

    This paper analyzes a system subject to repairable and non-repairable failures. Non-repairable failures lead to replacement of the system. Repairable failures, first lead to repair but they lead to replacement after a fixed number of repairs. Operating and repair times follow phase type distributions (PH-distributions) and the pattern of the operating times is modelled by a geometric process. In this context, the problem is to find the optimal number of repairs, which maximizes the long-run average reward per unit time. To this end, the optimal number is determined and it is obtained by efficient numerical procedures.

  18. REPAIR AND STRENGTHENING OF REINFORCED CONCRETE BEAMS USING FIBRE REINFORCED POLIMER (FRP MATERIALS

    Directory of Open Access Journals (Sweden)

    Nihat ÇETİNKAYA

    2004-03-01

    Full Text Available The use of Fibre Reinforced Polimer (FRP materials for the repair and strengthening of Reinforced Concrete structures has become widespread recently. FRP materials are being prefered because they have very high tensile strength, resistance to corrosion and they do not affect the use of the building during the repair and strengthening process. Four reinfoced concrete beams repaired and strengthened with FRP materials have been used in this study which were performed at Pamukkale University-Faculty of Engineering- Civil Engineering Department- Structural Engineering Laboratuary. The behaviour of the beams before and after repair and strengthening was compared by obtaining the load- displacement curves under static loading. In this study, it was observed that the repair and strengthening of reinforced concrete beams by using FRP materials had increased the load carrying capacity significantly.

  19. Wound repair in Pocillopora

    Science.gov (United States)

    Rodríguez-Villalobos, Jenny Carolina; Work, Thierry M.; Calderon-Aguileraa, Luis Eduardo

    2016-01-01

    Corals routinely lose tissue due to causes ranging from predation to disease. Tissue healing and regeneration are fundamental to the normal functioning of corals, yet we know little about this process. We described the microscopic morphology of wound repair in Pocillopora damicornis. Tissue was removed by airbrushing fragments from three healthy colonies, and these were monitored daily at the gross and microscopic level for 40 days. Grossly, corals healed by Day 30, but repigmentation was not evident at the end of the study (40 d). On histology, from Day 8 onwards, tissues at the lesion site were microscopically indistinguishable from adjacent normal tissues with evidence of zooxanthellae in gastrodermis. Inflammation was not evident. P. damicornis manifested a unique mode of regeneration involving projections of cell-covered mesoglea from the surface body wall that anastomosed to form gastrovascular canals.

  20. Groin hernia repair

    DEFF Research Database (Denmark)

    Kehlet, Henrik; Aasvang, Eske

    2005-01-01

    The choice of anesthesia for groin hernia repair is between general, regional (epidural or spinal), and local anesthesia. Existing data from large consecutive patient series and randomized studies have shown local anesthesia to be the method of choice because it can be performed by the surgeon......, does not necessarily require an attending anesthesiologist, translates into the shortest recovery (bypassing the postanesthesia care unit), has the lowest cost, and has the lowest postoperative morbidity regarding risk of urinary retention. Spinal anesthesia has no documented benefits for this small...... scientific data to support the choice of anesthesia, large epidemiologic and nationwide information from databases show an undesirable high (about 10-20%) use of spinal anesthesia and low (about 10%) use of local infiltration anesthesia. Surgeons and anesthesiologists should therefore adjust their anesthesia...

  1. BerEp4, cytokeratin 14, and cytokeratin 17 immunohistochemical staining aid in differentiation of basaloid squamous cell carcinoma from basal cell carcinoma with squamous metaplasia.

    Science.gov (United States)

    Linskey, Katy R; Gimbel, Devon C; Zukerberg, Lawrence R; Duncan, Lyn M; Sadow, Peter M; Nazarian, Rosalynn M

    2013-11-01

    Basaloid squamous cell carcinoma (bSCC) is an uncommon variant of squamous cell carcinoma, which may overlap histologically with basal cell carcinoma with squamous metaplasia (BCCm). To aid in the differentiation of these neoplasms using immunohistochemical staining because of the worse prognosis associated with bSCC. Using immunohistochemical techniques, we investigated BerEp4, cytokeratin 17 (CK17), and cytokeratin 14 (CK14) protein expression in 25 cases of bSCC (8 cutaneous [32%], 12 aerodigestive tract [48%], and 5 lymph node metastases [20%]) and 43 cases of BCCm (39 cutaneous [91%], and 4 metastases [9%]). An immunoreactivity score was assigned using the percentage of tumor cells staining and the pattern of expression. Interobserver agreement for 2 independent pathologists was assessed using a κ coefficient. The mean percentage of staining was significantly higher in BCCm, compared with bSCC (BerEp4, P = .006; CK17, P differentiation between BCCm and bSCC, and the addition of either CK14 or CK17 will augment the sensitivity and negative predictive value of BerEp4 staining in BCCm and bSCC diagnosis.

  2. Licence to Mine? Ein Überblick über Rahmenbedingungen von Text and Data Mining und den aktuellen Stand der Diskussion

    Directory of Open Access Journals (Sweden)

    Christian Winterhalter

    2016-11-01

    Full Text Available Der Artikel gibt einen Überblick über die Möglichkeiten der Anwendung von Text and Data Mining (TDM und ähnlichen Verfahren auf der Grundlage bestehender Regelungen in Lizenzverträgen zu kostenpflichtigen elektronischen Ressourcen, die Debatte über zusätzliche Lizenzen für TDM am Beispiel von Elseviers TDM Policy und den Stand der Diskussion über die Einführung von Schrankenregelungen im Urheberrecht für TDM zu nichtkommerziellen wissenschaftlichen Zwecken. The article gives a survey about the potential application of text and data mining (TDM or similar techniques on the basis of given licence agreements for subscription-based electronic resources. It also resumes the debate about the supplemental licence amendments for TDM that has arisen over the introduction of Elsevier’s TDM Policy. Finally, it describes the current discussions about the possible implementation of copyright exemptions for TDM within the context of non-commercial scientific research.

  3. Gaza revisited: Eine inhaltsanalytische Untersuchung der Berichterstattung deutscher Qualitätszeitungen über die Gaza-Kriege 2008/2009 und 2012

    Directory of Open Access Journals (Sweden)

    Mareike Witte

    2014-07-01

    Full Text Available Diese Studie untersucht die Berichterstattung über die beiden Gaza-Kriege 2008/2009 und 2012 in den überregionalen Tageszeitungen Frankfurter Allgemeine Zeitung (FAZ und die tageszeitung (taz. Der Schwerpunkt liegt auf den Unterschieden in der Berichterstattung über den ersten und den zweiten Gaza-Krieg sowie zwischen der Berichterstattung der FAZ und der taz gemäß ihrer Positionierung im publizistischen Rechts-Links-Spektrum. Es wird angenommen, dass die Orientierungs- und Kritikfunktion der Tageszeitungen durch die redaktionelle Linie und das News Management staatlicher Akteure inhaltlich beeinflusst werden. Zu den zentralen Ergebnissen zählt, dass sich lediglich Unterschiede in der Berichterstattung über den ersten und den zweiten Gaza-Krieg identifizieren lassen. Die redaktionelle Linie von FAZ und taz hat kaum einen moderierenden Einfluss. Die Berichte und Kommentare zum zweiten Gaza-Krieg sind in beiden Tageszeitungen Israel-freundlicher als während des ersten Gaza-Kriegs. Diese für Israel positive Entwicklung der Berichterstattung lässt sich möglicherweise auf das News Management der israelischen Armee und den weniger opferreichen Kriegsverlauf der israelischen Luftoffensive zurückführen.

  4. Effect of the XRCC1 codon 399 polymorphism on the repair of vinyl chloride metabolite-induced DNA damage

    Directory of Open Access Journals (Sweden)

    Li Yongliang

    2009-01-01

    Full Text Available Background: Recent epidemiologic evidence suggests that the common polymorphism at amino acid residue 399 of the x-ray cross complementing-1 (XRCC1 protein, a key component of the base excision repair (BER pathway for DNA damage, plays a significant role in the genetic variability of individuals in terms of the mutagenic damage they experience following exposure to the carcinogen vinyl chloride (VC. The aim of this study was to provide support for the biological plausibility of these epidemiologic observations with experimental data derived from cell lines in culture from individuals who were either homozygous wild-type or homozygous variant for this XRCC1 polymorphism following exposure to chloroethylene oxide (CEO, the active metabolite of VC, with measurement of the induced etheno-DNA adducts before and after repair. Materials and Methods: Immortalized lymphoblast cell lines from seven VC workers (four homozygous wild-type and three homozygous variant for the 399 XRCC1 polymorphism were exposed to CEO, and etheno-adenosine (εA adduct levels were determined by enzyme-linked immunosorbent assay (ELISA pre-exposure and at 0, 4, 8 and 24 h following exposure. Results: The average εA adduct levels were statistically significantly higher in the variant cells compared to the wild-type cells at 8 and 24 h following exposure (P< 0.05 with an overall average repair efficiency of 32% in the variant cells compared to 82% in the wild-type cells. Conclusion: These results are consistent with the epidemiologic findings of the types of VC-induced biomarkers observed in exposed individuals and the mutational spectra found in the resultant tumors as well as the key role that BER, especially XRCC1, plays in this carcinogenic pathway.

  5. DNA glycosylases involved in base excision repair may be associated with cancer risk in BRCA1 and BRCA2 mutation carriers.

    Science.gov (United States)

    Osorio, Ana; Milne, Roger L; Kuchenbaecker, Karoline; Vaclová, Tereza; Pita, Guillermo; Alonso, Rosario; Peterlongo, Paolo; Blanco, Ignacio; de la Hoya, Miguel; Duran, Mercedes; Díez, Orland; Ramón Y Cajal, Teresa; Konstantopoulou, Irene; Martínez-Bouzas, Cristina; Andrés Conejero, Raquel; Soucy, Penny; McGuffog, Lesley; Barrowdale, Daniel; Lee, Andrew; Swe-Brca; Arver, Brita; Rantala, Johanna; Loman, Niklas; Ehrencrona, Hans; Olopade, Olufunmilayo I; Beattie, Mary S; Domchek, Susan M; Nathanson, Katherine; Rebbeck, Timothy R; Arun, Banu K; Karlan, Beth Y; Walsh, Christine; Lester, Jenny; John, Esther M; Whittemore, Alice S; Daly, Mary B; Southey, Melissa; Hopper, John; Terry, Mary B; Buys, Saundra S; Janavicius, Ramunas; Dorfling, Cecilia M; van Rensburg, Elizabeth J; Steele, Linda; Neuhausen, Susan L; Ding, Yuan Chun; Hansen, Thomas V O; Jønson, Lars; Ejlertsen, Bent; Gerdes, Anne-Marie; Infante, Mar; Herráez, Belén; Moreno, Leticia Thais; Weitzel, Jeffrey N; Herzog, Josef; Weeman, Kisa; Manoukian, Siranoush; Peissel, Bernard; Zaffaroni, Daniela; Scuvera, Giulietta; Bonanni, Bernardo; Mariette, Frederique; Volorio, Sara; Viel, Alessandra; Varesco, Liliana; Papi, Laura; Ottini, Laura; Tibiletti, Maria Grazia; Radice, Paolo; Yannoukakos, Drakoulis; Garber, Judy; Ellis, Steve; Frost, Debra; Platte, Radka; Fineberg, Elena; Evans, Gareth; Lalloo, Fiona; Izatt, Louise; Eeles, Ros; Adlard, Julian; Davidson, Rosemarie; Cole, Trevor; Eccles, Diana; Cook, Jackie; Hodgson, Shirley; Brewer, Carole; Tischkowitz, Marc; Douglas, Fiona; Porteous, Mary; Side, Lucy; Walker, Lisa; Morrison, Patrick; Donaldson, Alan; Kennedy, John; Foo, Claire; Godwin, Andrew K; Schmutzler, Rita Katharina; Wappenschmidt, Barbara; Rhiem, Kerstin; Engel, Christoph; Meindl, Alfons; Ditsch, Nina; Arnold, Norbert; Plendl, Hans Jörg; Niederacher, Dieter; Sutter, Christian; Wang-Gohrke, Shan; Steinemann, Doris; Preisler-Adams, Sabine; Kast, Karin; Varon-Mateeva, Raymonda; Gehrig, Andrea; Stoppa-Lyonnet, Dominique; Sinilnikova, Olga M; Mazoyer, Sylvie; Damiola, Francesca; Poppe, Bruce; Claes, Kathleen; Piedmonte, Marion; Tucker, Kathy; Backes, Floor; Rodríguez, Gustavo; Brewster, Wendy; Wakeley, Katie; Rutherford, Thomas; Caldés, Trinidad; Nevanlinna, Heli; Aittomäki, Kristiina; Rookus, Matti A; van Os, Theo A M; van der Kolk, Lizet; de Lange, J L; Meijers-Heijboer, Hanne E J; van der Hout, A H; van Asperen, Christi J; Gómez Garcia, Encarna B; Hoogerbrugge, Nicoline; Collée, J Margriet; van Deurzen, Carolien H M; van der Luijt, Rob B; Devilee, Peter; Hebon; Olah, Edith; Lázaro, Conxi; Teulé, Alex; Menéndez, Mireia; Jakubowska, Anna; Cybulski, Cezary; Gronwald, Jacek; Lubinski, Jan; Durda, Katarzyna; Jaworska-Bieniek, Katarzyna; Johannsson, Oskar Th; Maugard, Christine; Montagna, Marco; Tognazzo, Silvia; Teixeira, Manuel R; Healey, Sue; Investigators, Kconfab; Olswold, Curtis; Guidugli, Lucia; Lindor, Noralane; Slager, Susan; Szabo, Csilla I; Vijai, Joseph; Robson, Mark; Kauff, Noah; Zhang, Liying; Rau-Murthy, Rohini; Fink-Retter, Anneliese; Singer, Christian F; Rappaport, Christine; Geschwantler Kaulich, Daphne; Pfeiler, Georg; Tea, Muy-Kheng; Berger, Andreas; Phelan, Catherine M; Greene, Mark H; Mai, Phuong L; Lejbkowicz, Flavio; Andrulis, Irene; Mulligan, Anna Marie; Glendon, Gord; Toland, Amanda Ewart; Bojesen, Anders; Pedersen, Inge Sokilde; Sunde, Lone; Thomassen, Mads; Kruse, Torben A; Jensen, Uffe Birk; Friedman, Eitan; Laitman, Yael; Shimon, Shani Paluch; Simard, Jacques; Easton, Douglas F; Offit, Kenneth; Couch, Fergus J; Chenevix-Trench, Georgia; Antoniou, Antonis C; Benitez, Javier

    2014-04-01

    Single Nucleotide Polymorphisms (SNPs) in genes involved in the DNA Base Excision Repair (BER) pathway could be associated with cancer risk in carriers of mutations in the high-penetrance susceptibility genes BRCA1 and BRCA2, given the relation of synthetic lethality that exists between one of the components of the BER pathway, PARP1 (poly ADP ribose polymerase), and both BRCA1 and BRCA2. In the present study, we have performed a comprehensive analysis of 18 genes involved in BER using a tagging SNP approach in a large series of BRCA1 and BRCA2 mutation carriers. 144 SNPs were analyzed in a two stage study involving 23,463 carriers from the CIMBA consortium (the Consortium of Investigators of Modifiers of BRCA1 and BRCA2). Eleven SNPs showed evidence of association with breast and/or ovarian cancer at p<0.05 in the combined analysis. Four of the five genes for which strongest evidence of association was observed were DNA glycosylases. The strongest evidence was for rs1466785 in the NEIL2 (endonuclease VIII-like 2) gene (HR: 1.09, 95% CI (1.03-1.16), p = 2.7 × 10(-3)) for association with breast cancer risk in BRCA2 mutation carriers, and rs2304277 in the OGG1 (8-guanine DNA glycosylase) gene, with ovarian cancer risk in BRCA1 mutation carriers (HR: 1.12 95%CI: 1.03-1.21, p = 4.8 × 10(-3)). DNA glycosylases involved in the first steps of the BER pathway may be associated with cancer risk in BRCA1/2 mutation carriers and should be more comprehensively studied.

  6. DNA glycosylases involved in base excision repair may be associated with cancer risk in BRCA1 and BRCA2 mutation carriers.

    Directory of Open Access Journals (Sweden)

    Ana Osorio

    2014-04-01

    Full Text Available Single Nucleotide Polymorphisms (SNPs in genes involved in the DNA Base Excision Repair (BER pathway could be associated with cancer risk in carriers of mutations in the high-penetrance susceptibility genes BRCA1 and BRCA2, given the relation of synthetic lethality that exists between one of the components of the BER pathway, PARP1 (poly ADP ribose polymerase, and both BRCA1 and BRCA2. In the present study, we have performed a comprehensive analysis of 18 genes involved in BER using a tagging SNP approach in a large series of BRCA1 and BRCA2 mutation carriers. 144 SNPs were analyzed in a two stage study involving 23,463 carriers from the CIMBA consortium (the Consortium of Investigators of Modifiers of BRCA1 and BRCA2. Eleven SNPs showed evidence of association with breast and/or ovarian cancer at p<0.05 in the combined analysis. Four of the five genes for which strongest evidence of association was observed were DNA glycosylases. The strongest evidence was for rs1466785 in the NEIL2 (endonuclease VIII-like 2 gene (HR: 1.09, 95% CI (1.03-1.16, p = 2.7 × 10(-3 for association with breast cancer risk in BRCA2 mutation carriers, and rs2304277 in the OGG1 (8-guanine DNA glycosylase gene, with ovarian cancer risk in BRCA1 mutation carriers (HR: 1.12 95%CI: 1.03-1.21, p = 4.8 × 10(-3. DNA glycosylases involved in the first steps of the BER pathway may be associated with cancer risk in BRCA1/2 mutation carriers and should be more comprehensively studied.

  7. Pulmonary function in automobile repair workers

    Directory of Open Access Journals (Sweden)

    Chattopadhyay O

    2007-01-01

    Full Text Available Background : Automobile repair shop is a place where workers are exposed to harmful chemicals and toxic substances. Objective : To study the occurrence of obstructive and restrictive pulmonary impairment among automobile garage workers. Methods : A cross sectional study involving 151 automobile garage workers from 14 randomly selected garages of urban Kolkata. The study variables were Forced Expiratory Volume in 1 second (FEV 1 , Forced Vital Capacity (FVC, Peak Expiratory Flow Rate (PE FR, age, smoking habit, duration of work, type of work, and respiratory symptoms. The study was analysed using Regression equations, and Chi-square test. Results : All the workers were male. Obstructive impairment was seen in 25.83% of the workers whereas restrictive impairment was seen in 21.19% of the workers. Mixed obstructive and restrictive impairment was seen in 10.6% of the workers. The frequency of obstructive impairment was higher in older workers. In the age group of less than 20 years, 13.6% of the workers had obstructive impairment while 42.86% of workers above 40 years of age had obstructive impairment. Obstructive impairment was more frequently observed in battery repair workers (58.33% and spray painters (37.5% while 16.67% of the body repair workers and 30.19% of the engine mechanics had obstructive impairment. Obstructive impairment was more frequently observed in smokers (53.1 % as compared to ex-smokers (33.3% and non-smokers (6.4%. Obstructive impairment was more frequently observed in workers who had been working for a longer duration. Conclusion: Nearly 36.4% of the automobile garage workers had some form of pulmonary function impairment; obstructive and/or restrictive. The use of personal protective equipment, worker education, and discontinuation of the use of paints containing toxic pigments are recommended.

  8. 低水平1,3-丁二烯职业接触人群遗传损伤及其对 DNA 修复能力影响研究%Study on genetic damage and DNA repair capacity among workers exposed to low level of 1,3-butadiene

    Institute of Scientific and Technical Information of China (English)

    李忠生; 刘楠; 关维俊; 孟会林; 崔涛; 李斌

    2015-01-01

    Objective To explore the correlation between DNA repair capacity ( DRC) and genetic damage in peripheral blood lymphocytes of workers exposed to low level of 1,3-butadiene (BD).Methods With a cross-sectional study, 60 workers from a petrochemical enterprise who were exposed to BD were selected as the exposure group , and 1∶1 matched by age and length of service , 60 non-occupational BD exposure workers in the same enterprise were chosen as the control group.BD level in workplace air was measured by direct injection-gas chromatography determination method .Cytokinesis-block micronucleus ( MN) detection and alkaline comet assay were used to evaluate chromosomal and DNA damage levels in peripheral blood lymphocytes of the two groups .DRC for bleomycin ( BLM)-induced DNA damage in peripheral blood lymphocytes was measured by sensitivity test of the mutagenic agent BLM .Results The short time expose concentration of BD in the air of workplace of the exposure group was 0.59-2.76(1.80 ±0.20) mg/m3 , and BD was not detected in the air of workplace of the control group.The rates of MN, nucleoplasmic bridge (NPB), nuclear buds (NB) and Olive tail moment ( OTM ) of peripheral blood lymphocyte in the exposure group were higher than those in the control group respectively [(1.81 ±0.96)‰ vs (1.02 ±0.68)‰, 1.00‰(0.00-3.00)‰ vs 0.00‰(0.00-1.00)‰, 3.00‰(1.00-5.00)‰ vs 1.00‰(0.00-3.00)‰, 5.25(3.96-5.73) μm vs 2.38(1.35-3.88) μm, P 0.05).Among the exposure group, there was statistical moderate positive correlation between the b /c rate ofperipheral blood lymphocyte and the rates of MN , NPB and NB respectively (rS were 0.730, 0.515 and 0.660, P 0.05).Conclusion Low levels of BD occupational exposure may lead to the genetic damage in peripheral blood lymphocytes of workers ,which may have some relevance with the DRC.%目的:探讨职业性低水平接触1,3-丁二烯(BD)所致周围血淋巴细胞遗传损伤与DNA修复能力的相关性。方法

  9. How to repair an episiotomy.

    Science.gov (United States)

    Steen, Mary; Cummins, Bernie

    2016-02-17

    Rationale and key points Skilful repair of an episiotomy is an important aspect of maternal health care. It is essential that midwives and doctors have the knowledge and skills to undertake this procedure in a safe and effective manner. ▶ An episiotomy should be repaired promptly to reduce blood loss and prevent infection. ▶ Repair of an episiotomy is undertaken in three stages: repair of the vaginal mucosa, repair of the muscle layer and repair of the skin layer. ▶ Adequate pain relief should be provided before suturing. Reflective activity Clinical skills articles can help update your practice and ensure it remains evidence based. Apply this article to your practice. Reflect on and write a short account of: 1. Why a rectal examination is recommended before and following repair of an episiotomy. 2. What you would do to improve your suturing skills. 3. The factors that may prevent or delay an episiotomy from healing. Subscribers can upload their reflective accounts at rcni.com/portfolio .

  10. DNA repair in Chromobacterium violaceum.

    Science.gov (United States)

    Duarte, Fábio Teixeira; Carvalho, Fabíola Marques de; Bezerra e Silva, Uaska; Scortecci, Kátia Castanho; Blaha, Carlos Alfredo Galindo; Agnez-Lima, Lucymara Fassarella; Batistuzzo de Medeiros, Silvia Regina

    2004-03-31

    Chromobacterium violaceum is a Gram-negative beta-proteobacterium that inhabits a variety of ecosystems in tropical and subtropical regions, including the water and banks of the Negro River in the Brazilian Amazon. This bacterium has been the subject of extensive study over the last three decades, due to its biotechnological properties, including the characteristic violacein pigment, which has antimicrobial and anti-tumoral activities. C. violaceum promotes the solubilization of gold in a mercury-free process, and has been used in the synthesis of homopolyesters suitable for the production of biodegradable polymers. The complete genome sequence of this organism has been completed by the Brazilian National Genome Project Consortium. The aim of our group was to study the DNA repair genes in this organism, due to their importance in the maintenance of genomic integrity. We identified DNA repair genes involved in different pathways in C. violaceum through a similarity search against known sequences deposited in databases. The phylogenetic analyses were done using programs of the PHILYP package. This analysis revealed various metabolic pathways, including photoreactivation, base excision repair, nucleotide excision repair, mismatch repair, recombinational repair, and the SOS system. The similarity between the C. violaceum sequences and those of Neisserie miningitidis and Ralstonia solanacearum was greater than that between the C. violaceum and Escherichia coli sequences. The peculiarities found in the C. violaceum genome were the absence of LexA, some horizontal transfer events and a large number of repair genes involved with alkyl and oxidative DNA damage.

  11. Vedr.: Military capacity building

    DEFF Research Database (Denmark)

    Larsen, Josefine Kühnel; Struwe, Lars Bangert

    2013-01-01

    Military capacity building has increasingly become an integral part of Danish defence. Military capacity is a new way of thinking Danish defence and poses a new set of challenges and opportunities for the Danish military and the Political leadership. On the 12th of december, PhD. Candidate Josefine...... Kühnel Larsen and researcher Lars Bangert Struwe of CMS had organized a seminar in collaboration with Royal Danish Defense Colleg and the East African Security Governance Network. The seminar focused on some of the risks involved in Military capacity building and how these risks are dealt with from...

  12. Vedr.: Military capacity building

    DEFF Research Database (Denmark)

    Larsen, Josefine Kühnel; Struwe, Lars Bangert

    2013-01-01

    Kühnel Larsen and researcher Lars Bangert Struwe of CMS had organized a seminar in collaboration with Royal Danish Defense Colleg and the East African Security Governance Network. The seminar focused on some of the risks involved in Military capacity building and how these risks are dealt with from......Military capacity building has increasingly become an integral part of Danish defence. Military capacity is a new way of thinking Danish defence and poses a new set of challenges and opportunities for the Danish military and the Political leadership. On the 12th of december, PhD. Candidate Josefine...

  13. Autonomic Self-Repairing Glassy Materials

    Energy Technology Data Exchange (ETDEWEB)

    Coillot, D.; Mear, F.O.; Montagne, L. [Univ Lille Nord France, CNRS, Unite Catalyse and Chim Solide, UMR 8181, F-59652 Villeneuve Dascq (France); Podor, R. [CEA Marcoule, CNRS UM2 ENSCM, Inst Chim Separat Marcoule, UMR 5257, 30 (France)

    2010-07-01

    A new process that enables glassy materials to self-repair from mechanical damage is presented in this paper. Contrary to intrinsic self-healing, which involves overheating to enable crack healing by glass softening, this process is based on an extrinsic effect produced by vanadium boride (VB) particles dispersed within the glass matrix. Self-repair is obtained through the oxidation of VB particles, and thus without the need to increase the operating temperature. The VB healing agent is selected for its capacity to oxidize at a lower temperature than the softening point of the glass. Thermogravimetric analyses indeed show that VB oxidation is rapid and occurs below the glass transition temperature. Solid-state nuclear magnetic resonance spectroscopy indicates that VB is oxidized into V{sub 2}O{sub 5} and B{sub 2}O{sub 3}, which enable the local formation of glass. The autonomic self-healing effect is demonstrated by an in situ experiment visualized using an environmental scanning electron microscope. It is shown that a crack could be healed by the VB oxidation products. (authors)

  14. Cartilage repair: Generations of autologous chondrocyte transplantation

    Energy Technology Data Exchange (ETDEWEB)

    Marlovits, Stefan [Department of Traumatology, Center for Joint and Cartilage, Medical University of Vienna, Waehringer Guertel 18-20, A-1090 Vienna (Austria)]. E-mail: stefan.marlovits@meduniwien.ac.at; Zeller, Philip [Department of Traumatology, Center for Joint and Cartilage, Medical University of Vienna, Waehringer Guertel 18-20, A-1090 Vienna (Austria); Singer, Philipp [Department of Traumatology, Center for Joint and Cartilage, Medical University of Vienna, Waehringer Guertel 18-20, A-1090 Vienna (Austria); Resinger, Christoph [Department of Traumatology, Center for Joint and Cartilage, Medical University of Vienna, Waehringer Guertel 18-20, A-1090 Vienna (Austria); Vecsei, Vilmos [Department of Traumatology, Center for Joint and Cartilage, Medical University of Vienna, Waehringer Guertel 18-20, A-1090 Vienna (Austria)

    2006-01-15

    Articular cartilage in adults has a limited capacity for self-repair after a substantial injury. Surgical therapeutic efforts to treat cartilage defects have focused on delivering new cells capable of chondrogenesis into the lesions. Autologous chondrocyte transplantation (ACT) is an advanced cell-based orthobiologic technology used for the treatment of chondral defects of the knee that has been in clinical use since 1987 and has been performed on 12,000 patients internationally. With ACT, good to excellent clinical results are seen in isolated post-traumatic lesions of the knee joint in the younger patient, with the formation of hyaline or hyaline-like repair tissue. In the classic ACT technique, chondrocytes are isolated from small slices of cartilage harvested arthroscopically from a minor weight-bearing area of the injured knee. The extracellular matrix is removed by enzymatic digestion, and the cells are then expanded in monolayer culture. Once a sufficient number of cells has been obtained, the chondrocytes are implanted into the cartilage defect, using a periosteal patch over the defect as a method of cell containment. The major complications are periosteal hypertrophy, delamination of the transplant, arthrofibrosis and transplant failure. Further improvements in tissue engineering have contributed to the next generation of ACT techniques, where cells are combined with resorbable biomaterials, as in matrix-associated autologous chondrocyte transplantation (MACT). These biomaterials secure the cells in the defect area and enhance their proliferation and differentiation.

  15. Advanced Strategies for Articular Cartilage Defect Repair

    Directory of Open Access Journals (Sweden)

    Fergal J. O'Brien

    2013-02-01

    Full Text Available Articular cartilage is a unique tissue owing to its ability to withstand repetitive compressive stress throughout an individual’s lifetime. However, its major limitation is the inability to heal even the most minor injuries. There still remains an inherent lack of strategies that stimulate hyaline-like articular cartilage growth with appropriate functional properties. Recent scientific advances in tissue engineering have made significant steps towards development of constructs for articular cartilage repair. In particular, research has shown the potential of biomaterial physico-chemical properties significantly influencing the proliferation, differentiation and matrix deposition by progenitor cells. Accordingly, this highlights the potential of using such properties to direct the lineage towards which such cells follow. Moreover, the use of soluble growth factors to enhance the bioactivity and regenerative capacity of biomaterials has recently been adopted by researchers in the field of tissue engineering. In addition, gene therapy is a growing area that has found noteworthy use in tissue engineering partly due to the potential to overcome some drawbacks associated with current growth factor delivery systems. In this context, such advanced strategies in biomaterial science, cell-based and growth factor-based therapies that have been employed in the restoration and repair of damaged articular cartilage will be the focus of this review article.

  16. 'Hide-then-hit' to explain the importance of genotypic polymorphism of DNA repair genes in determining susceptibility to cancer

    Institute of Scientific and Technical Information of China (English)

    Pei-Ei Wu; Chen-Yang Shen

    2011-01-01

    Interindividual variations in DNA repair capacity/efficiency linked to the presence of polymorphisms in DNA repair-related genes have been suggested to account for different risk of developing cancers. In this review article, on the basis of breast cancer formation as a model, we propose a 'hide-then-hit' hypothesis indicating the importance of escaping checkpoint surveillance for sub-optimal DNA repair variants to cause cancer. Therefore, only cells with subtle defects in repair capacity arising from low-penetrance variants of DNA repair genes would have the opportunity to grow and accumulate the genetic changes needed for cancer formation, without triggering cell-cycle checkpoint surveillance. Furthermore, distinct from high-penetrance alleles, these polymorphic alleles of DNA repair genes would predispose carriers to a higher risk of developing cancer but would not necessarily cause cancer. To examine this,we simultaneously genotyped multiple SNPs of cell-cycle checkpoint genes and the DNA repair genes. Support for the hypothesis came from observations that breast cancer risk associated with variant genotypes of DNA repair genes became more significant in be confirmed by biological evidence in which a cause-effect relationship has to be established. However, based on this, possible gene-gene interaction is considered to play an important role in modifying the cancer risk associated with genotypic polymorphism of DNA repair gene in different study populations.

  17. Influence of Electrode Plate Area and Arrangement of 3BER Reactor on the Nitrogen Removal%3BER反应器极板面积和布置形式对脱氮效果的影响

    Institute of Scientific and Technical Information of China (English)

    郝瑞霞; 任晓克; 徐忠强

    2016-01-01

    In order to improve the nitrogen removal efficiency and effluent quality of the three-dimensional electrode biofilm process (3BER), a new designed 3BER-NC process through expanding the area of electrode plate, reducing the electrode space and changing the electrode arrangement was applied and the effect of current, influent pH and 籽( C)/籽( N) on the performance and denitrifying bacteria in system were studied in deep denitrification of the tail water from a municipal wastewater treatment plant. The research results showed that the 3BER-NC operated with an optimal current at 200 mA, which was 100 mA higher than that of 3BER. Because of its shorter electrode space, the 3BER-NC can slow down the carbon electrolysis and effluent color. Furthermore, the enlargement of electrode plate and the change of electrode position distribution of the 3 BER-NC improved the TN removal rate to 86. 45℅, which was 37. 74℅ higher than that of 3BER. The current intensity, influent pH and 籽( C )/籽( N ) had great influence on the nitrogen removal at different current and the nitrogen removal efficiency of 3 BER-NC was better than 3BER. In the nitrogen removal system of the 3BER-NC, the β-proteobacteria played a leadingrole with a joint action of heterotrophic and autotrophic denitrifying bacteria.%为提高三维电极生物膜工艺(3BER)脱氮效率及出水水质,通过增大极板面积、减少极板间距、改变电极布置形式,构建了新型三维电极生物膜反应器(3BER-NC)用于城市污水厂尾水深度脱氮处理,研究了电流、进水pH和籽( C)/籽( N)对其运行效果的影响,并分析了系统中反硝化菌群分布特征. 研究结果表明:减少极板间距能减缓碳棒阳极电解,出水色度低,能在较高的电流下运行,3BER-NC最佳运行电流为200 mA,比3BER反应器高出100 mA. 增大极板面积和改变极板位置分布有利于反硝化反应的进行,TN平均去除率提高约37. 74℅. 电流强度、进水pH和籽(C)/

  18. Entwurf, Entwicklung und Inbetriebnahme eines verteilten Rechnerkontrollsystems für die Elektronen-Stretcher-Anlage ELSA, unter besonderer Berücksichtigung der Extraktion im Nachbeschleunigungsbetrieb bis 3.5 GeV

    CERN Document Server

    Picard, M

    1995-01-01

    Entwurf, Entwicklung und Inbetriebnahme eines verteilten Rechnerkontrollsystems für die Elektronen-Stretcher-Anlage ELSA, unter besonderer Berücksichtigung der Extraktion im Nachbeschleunigungsbetrieb bis 3.5 GeV

  19. Entwicklung und Inbetriebnahme eines verteilten Rechnerkontrollsystems zur Steuerung der Elektronen-Stretcher-Anlage ELSA, unter besonderer Berücksichtigung der Anforderungen des Nachbeschleunigungsbetriebs bis 3.5 GeV

    CERN Document Server

    Götz, T

    1995-01-01

    Entwicklung und Inbetriebnahme eines verteilten Rechnerkontrollsystems zur Steuerung der Elektronen-Stretcher-Anlage ELSA, unter besonderer Berücksichtigung der Anforderungen des Nachbeschleunigungsbetriebs bis 3.5 GeV

  20. 40 CFR 798.5500 - Differential growth inhibition of repair proficient and repair deficient bacteria: “Bacterial DNA...

    Science.gov (United States)

    2010-07-01

    ... repair proficient and repair deficient bacteria: âBacterial DNA damage or repair tests.â 798.5500 Section... inhibition of repair proficient and repair deficient bacteria: “Bacterial DNA damage or repair tests.” (a... killing or growth inhibition of repair deficient bacteria in a set of repair proficient and deficient...

  1. Bone repair and stem cells.

    Science.gov (United States)

    Ono, Noriaki; Kronenberg, Henry M

    2016-10-01

    Bones are an important component of vertebrates; they grow explosively in early life and maintain their strength throughout life. Bones also possess amazing capabilities to repair-the bone is like new without a scar after complete repair. In recent years, a substantial progress has been made in our understanding on mammalian bone stem cells. Mouse genetic models are powerful tools to understand the cell lineage, giving us better insights into stem cells that regulate bone growth, maintenance and repair. Recent findings about these stem cells raise new questions that require further investigations.

  2. Repairing and Upgrading Your PC

    CERN Document Server

    Thompson, Robert

    2009-01-01

    Repairing and Upgrading Your PC delivers start-to-finish instructions, simple enough for even the most inexperienced PC owner, for troubleshooting, repairing, and upgrading your computer. Written by hardware experts Robert Bruce Thompson and Barbara Fritchman Thompson, this book covers it all: how to troubleshoot a troublesome PC, how to identify which components make sense for an upgrade, and how to tear it all down and put it back together. This book shows how to repair and upgrade all of your PC's essential components.

  3. Laparoscopic repair of incisional hernia.

    Science.gov (United States)

    Lau, H; Lee, F; Patil, N G

    2001-09-01

    A 75-year-old man developed an incisional hernia over the upper abdomen following a wedge resection of a gastric stromal tumour in 1996. This is the first published report of a successful repair of an incisional hernia via a laparoscopic intraperitoneal on-lay technique using GORE-TEX DualMesh material in Hong Kong. Compared with conventional open repair of incisional hernia, long incisions and wound tension are avoided using the laparoscopic approach. This translates into a reduced risk of wound-related complications and facilitates recovery. In selected cases, minimally invasive surgery is a safe technique for the repair of incisional hernias.

  4. [Inguinal and femoral hernia repair].

    Science.gov (United States)

    Geissler, B; Anthuber, M

    2011-05-01

    With an incidence of 200,000 new cases per year in Germany, inguinal hernia has a significant socioeconomic impact. The 2009 guidelines from the European Hernia Society established treatment recommendations. Hernia repair is based on reinforcing the posterior wall of the inguinal canal by suture or mesh repair by an anterior or posterior approach. Lightweight mesh reduces recurrence rates and is the treatment of choice even in primary hernias. Laparoscopic hernia repair is associated with specific risks but is superior in postoperative pain and earlier return to work.

  5. DNA Repair in Human Pluripotent Stem Cells Is Distinct from That in Non-Pluripotent Human Cells

    Science.gov (United States)

    Luo, Li Z.; Park, Sang-Won; Bates, Steven E.; Zeng, Xianmin; Iverson, Linda E.; O'Connor, Timothy R.

    2012-01-01

    The potential for human disease treatment using human pluripotent stem cells, including embryonic stem cells and induced pluripotent stem cells (iPSCs), also carries the risk of added genomic instability. Genomic instability is most often linked to DNA repair deficiencies, which indicates that screening/characterization of possible repair deficiencies in pluripotent human stem cells should be a necessary step prior to their clinical and research use. In this study, a comparison of DNA repair pathways in pluripotent cells, as compared to those in non-pluripotent cells, demonstrated that DNA repair capacities of pluripotent cell lines were more heterogeneous than those of differentiated lines examined and were generally greater. Although pluripotent cells had high DNA repair capacities for nucleotide excision repair, we show that ultraviolet radiation at low fluxes induced an apoptotic response in these cells, while differentiated cells lacked response to this stimulus, and note that pluripotent cells had a similar apoptotic response to alkylating agent damage. This sensitivity of pluripotent cells to damage is notable since viable pluripotent cells exhibit less ultraviolet light-induced DNA damage than do differentiated cells that receive the same flux. In addition, the importance of screening pluripotent cells for DNA repair defects was highlighted by an iPSC line that demonstrated a normal spectral karyotype, but showed both microsatellite instability and reduced DNA repair capacities in three out of four DNA repair pathways examined. Together, these results demonstrate a need to evaluate DNA repair capacities in pluripotent cell lines, in order to characterize their genomic stability, prior to their pre-clinical and clinical use. PMID:22412831

  6. Stalin Coctail: Schostakowitsch Kammersinfonie Nr. 2 (aus Streichquartett Nr. 3 op. 73). Pärt, Arvo: Collage über das Thema B-A-C-H / Susanne Benda

    Index Scriptorium Estoniae

    Benda, Susanne

    1995-01-01

    Uuest heliplaadist "Stalin Coctail: Schostakowitsch Kammersinfonie Nr. 2 (aus Streichquartett Nr. 3 op. 73). Pärt, Arvo: Collage über das Thema B-A-C-H. Cantus in memoriam B. Britten. Denisov Variationen über Haydns Kanon Tod ist ein langer Schlaf. Schtschedrin Stalin Coctail. Moskauer Virtuosen, Vladimir Spivakov. RCA/BMG-Ariola CD 09026 68061 2 (WD: 67'33")

  7. Mytedræber

    DEFF Research Database (Denmark)

    Albris, Kristoffer

    2016-01-01

    ANALYSE Når katastrofen rammer, er det ikke panik og egoisme, der råder, men derimod næstekærlige værdier.......ANALYSE Når katastrofen rammer, er det ikke panik og egoisme, der råder, men derimod næstekærlige værdier....

  8. CO diffusion capacity

    Energy Technology Data Exchange (ETDEWEB)

    Mielke, U.

    1979-01-01

    We measured in 287 persons the pulmonary CO diffusion capacity with the steady-state and the single breath methods, applying apnoeic periods of 4 and 10 seconds duration. The aspects methodical significance, polyclinical applicability and pathognostic relevance with respect to other approved pulmonary functional tests are discussed. Differing pulmonary diffusion capacity values found in normal persons or in patients suffering from silicosis, pulmonary fibrosis, Boeck's disease or rheumatoid arthritis, were investigated and critically evaluated.

  9. Revisiting Absorptive Capacity

    DEFF Research Database (Denmark)

    de Araújo, Ana Luiza Lara; Ulhøi, John Parm; Lettl, Christopher

    Absorptive capacity has mostly been perceived as a 'passive' outcome of R&D investments. Recently, however, a growing interest into its 'proactive' potentials has emerged. This paper taps into this development and proposes a dynamic model for conceptualizing the determinants of the complementary...... learning processes of absorptive capacity, which comprise combinative and adaptive capabilities. Drawing on survey data (n=169), the study concludes that combinative capabilities primarily enhance transformative and exploratory learning processes, while adaptive capabilities strengthen all three learning...

  10. Revisiting Absorptive Capacity

    DEFF Research Database (Denmark)

    de Araújo, Ana Luiza Lara; Ulhøi, John Parm; Lettl, Christopher

    Absorptive capacity has mostly been perceived as a 'passive' outcome of R&D investments. Recently, however, a growing interest into its 'proactive' potentials has emerged. This paper taps into this development and proposes a dynamic model for conceptualizing the determinants of the complementary...... learning processes of absorptive capacity, which comprise combinative and adaptive capabilities. Drawing on survey data (n=169), the study concludes that combinative capabilities primarily enhance transformative and exploratory learning processes, while adaptive capabilities strengthen all three learning...

  11. Large myelomeningocele repair

    Directory of Open Access Journals (Sweden)

    Farideh Nejat

    2011-01-01

    Full Text Available Background: Wound closure is accomplished in most cases of myelomeningocele (MMC by undermining of the skin edges surrounding the defect. However, large defects cannot be closed reliably by this simple technique. Due to the technical challenge associated with large MMC, surgeons have devised different methods for repairing large defects. In this paper, we report our experience of managing large defects, which we believe bears a direct relationship to decrease the incidence of wound complications. Materials and Methods: Forty children with large MMCs underwent surgical repair and represent our experience. We recommend using all hairy skin around the defect as a way to decrease the tension on the edges of the wound and the possible subsequent necrosis. It is our experience that vertical incision on one or two flanks parallel to the midline can decrease the tension of the wound. Moreover, ventriculo-peritoneal shunting for children who developed hydrocephalus was performed simultaneously, which constitutes another recommendation for preventing fluid collection and build up of pressure on the wound. Results: Patients in this study were in the age range of 2 days to 8 years. The most common location of MMC was in the thoracolumbar area. All but four patients had severe weakness in lower extremities. We used as much hairy skin around the MMC sac as possible in all cases. Vertical incisions on one or both flanks and simultaneous shunt procedure were performed in 36 patients. We treated children with large MMC defects with acceptable tension-free closure. Nonetheless, three patients developed superficial skin infection and partial wound dehiscence, and they were managed conservatively. Conclusions: We recommend using all hairy skin around the MMC defect for closure of large defects. In cases that were expected to be at a higher risk to develop dehiscence release incisions on one or two flanks towards the fascia were found to be useful. Simultaneous

  12. A Two-Unit Cold Standby Repairable System with One Replaceable Repair Facility and Delay Repair:Some Reliability Problems

    Institute of Scientific and Technical Information of China (English)

    WEI Ying-yuan; TANG Ying-hui

    2004-01-01

    This paper considers a two-unit same cold standby repairable system with a replaceable repair facility and delay repair .The failure time of unit is assumed to follow exponential distribution , and the repair time and delay time of failed unit are assumed to follow arbitrary distributions , whereas the failure and replacement time distributions of the repair facility are exponential and arbitrary . By using the Markov renewal process theory, some primary reliability quantities of the system are obtained.

  13. Production, Purification, and Characterization of ¹⁵N-Labeled DNA Repair Proteins as Internal Standards for Mass Spectrometric Measurements.

    Science.gov (United States)

    Reddy, Prasad T; Jaruga, Pawel; Nelson, Bryant C; Lowenthal, Mark S; Jemth, Ann-Sofie; Loseva, Olga; Coskun, Erdem; Helleday, Thomas; Dizdaroglu, Miral

    2016-01-01

    Oxidatively induced DNA damage is caused in living organisms by a variety of damaging agents, resulting in the formation of a multiplicity of lesions, which are mutagenic and cytotoxic. Unless repaired by DNA repair mechanisms before DNA replication, DNA lesions can lead to genomic instability, which is one of the hallmarks of cancer. Oxidatively induced DNA damage is mainly repaired by base excision repair pathway with the involvement of a plethora of proteins. Cancer tissues develop greater DNA repair capacity than normal tissues by overexpressing DNA repair proteins. Increased DNA repair in tumors that removes DNA lesions generated by therapeutic agents before they became toxic is a major mechanism in the development of therapy resistance. Evidence suggests that DNA repair capacity may be a predictive biomarker of patient response. Thus, knowledge of DNA-protein expressions in disease-free and cancerous tissues may help predict and guide development of treatments and yield the best therapeutic response. Our laboratory has developed methodologies that use mass spectrometry with isotope dilution for the measurement of expression of DNA repair proteins in human tissues and cultured cells. For this purpose, full-length (15)N-labeled analogs of a number of human DNA repair proteins have been produced and purified to be used as internal standards for positive identification and accurate quantification. This chapter describes in detail the protocols of this work. The use of (15)N-labeled proteins as internal standards for the measurement of several DNA repair proteins in vivo is also presented.

  14. 40 CFR 63.1024 - Leak repair.

    Science.gov (United States)

    2010-07-01

    ... 40 Protection of Environment 10 2010-07-01 2010-07-01 false Leak repair. 63.1024 Section 63.1024... Standards for Equipment Leaks-Control Level 2 Standards § 63.1024 Leak repair. (a) Leak repair schedule. The owner or operator shall repair each leak detected as soon as practical, but not later than 15...

  15. 40 CFR 65.105 - Leak repair.

    Science.gov (United States)

    2010-07-01

    ... 40 Protection of Environment 15 2010-07-01 2010-07-01 false Leak repair. 65.105 Section 65.105... FEDERAL AIR RULE Equipment Leaks § 65.105 Leak repair. (a) Leak repair schedule. The owner or operator shall repair each leak detected as soon as practical but not later than 15 calendar days after it...

  16. 40 CFR 63.1005 - Leak repair.

    Science.gov (United States)

    2010-07-01

    ... successful repair of the leak. (3) Maximum instrument reading measured by Method 21 of 40 CFR part 60... 40 Protection of Environment 10 2010-07-01 2010-07-01 false Leak repair. 63.1005 Section 63.1005... Standards for Equipment Leaks-Control Level 1 § 63.1005 Leak repair. (a) Leak repair schedule. The owner...

  17. The role of base excision repair in the development of primary open angle glaucoma in the Polish population.

    Science.gov (United States)

    Cuchra, Magda; Markiewicz, Lukasz; Mucha, Bartosz; Pytel, Dariusz; Szymanek, Katarzyna; Szemraj, Janusz; Szaflik, Jerzy; Szaflik, Jacek P; Majsterek, Ireneusz

    2015-08-01

    Glaucoma is a leading cause of irreversible blindness in developing countries. Previous data have shown that progressive loss of human TM cells may be connected with chronic exposure to oxidative stress. This hypothesis may suggest a role of the base excision repair (BER) pathway of oxidative DNA damage in primary open angle glaucoma (POAG) patients. The aim of our study was to evaluate an association of BER gene polymorphism with a risk of POAG. Moreover, an association of clinical parameters was examined including cup disk ratio (c/d), rim area (RA) and retinal nerve fiber layer (RNFL) with glaucoma progression according to BER gene polymorphisms. Our research included 412 patients with POAG and 454 healthy controls. Gene polymorphisms were analyzed by PCR-RFLP. Heidelberg Retinal Tomography (HRT) clinical parameters were also analyzed. The 399 Arg/Gln genotype of the XRCC1 gene (OR 1.38; 95% CI 1.02-1.89 p = 0.03) was associated with an increased risk of POAG occurrence. It was indicated that the 399 Gln/Gln XRCC1 genotype might increase the risk of POAG progression according to the c/d ratio (OR 1.67; 95% CI 1.07-2.61 P = 0.02) clinical parameter. Moreover, the association of VF factor with 148 Asp/Glu of APE1 genotype distribution and POAG progression (OR 2.25; 95% CI 1.30-3.89) was also found. Additionally, the analysis of the 324 Gln/His MUTYH polymorphism gene distribution in the patient group according to RNFL factor showed that it might decrease the progression of POAG (OR 0.47; 95% CI 0.30-0.82 P = 0.005). We suggest that the 399 Arg/Gln polymorphism of the XRCC1 gene may serve as a predictive risk factor of POAG.

  18. DNA repair deficiency in neurodegeneration

    DEFF Research Database (Denmark)

    Jeppesen, Dennis Kjølhede; Bohr, Vilhelm A; Stevnsner, Tinna V.

    2011-01-01

    : homologous recombination and non-homologous end-joining. Ataxia telangiectasia and related disorders with defects in these pathways illustrate that such defects can lead to early childhood neurodegeneration. Aging is a risk factor for neurodegeneration and accumulation of oxidative mitochondrial DNA damage......Deficiency in repair of nuclear and mitochondrial DNA damage has been linked to several neurodegenerative disorders. Many recent experimental results indicate that the post-mitotic neurons are particularly prone to accumulation of unrepaired DNA lesions potentially leading to progressive...... neurodegeneration. Nucleotide excision repair is the cellular pathway responsible for removing helix-distorting DNA damage and deficiency in such repair is found in a number of diseases with neurodegenerative phenotypes, including Xeroderma Pigmentosum and Cockayne syndrome. The main pathway for repairing oxidative...

  19. Early days of DNA repair: discovery of nucleotide excision repair and homology-dependent recombinational repair.

    Science.gov (United States)

    Rupp, W Dean

    2013-12-13

    The discovery of nucleotide excision repair in 1964 showed that DNA could be repaired by a mechanism that removed the damaged section of a strand and replaced it accurately by using the remaining intact strand as the template. This result showed that DNA could be actively metabolized in a process that had no precedent. In 1968, experiments describing postreplication repair, a process dependent on homologous recombination, were reported. The authors of these papers were either at Yale University or had prior Yale connections. Here we recount some of the events leading to these discoveries and consider the impact on further research at Yale and elsewhere.

  20. Construction, repair and maintenance

    Energy Technology Data Exchange (ETDEWEB)

    Hinger, R. [Terasen Pipelines, Calgary, AB (Canada); Wong, P. [KC Integrity Corp., Calgary, AB (Canada); Yeomans, M.; Glover, A. [TransCanada PipeLines Ltd., Calgary, AB (Canada)

    2003-07-01

    The presentations by Working Group 4 focused on construction, repair and maintenance of pipelines with particular reference to high-strength steels and their applications for natural gas transmission pipelines. Discussions focused on how technology can be used to provide cost-effective design and construction solutions for long distance pipelines in a manner that does not compromise safety and reliability. The role that carbon plays in increasing the toughness of steel was also discussed. A few fundamental changes in steel production technology and a reduction in carbon content can result in a simultaneous increase in strength and toughness of steels. The cost impact of this technology was summarized. It was concluded that high strength steels offer effective solutions to deliver cost-effective pipelines to transport natural gas from northern basins. This session also presented pipeline routes that transport diluted bitumens from the Athabasca Oil Sands Project and the Muskeg River Mine to upgrader facilities in Alberta. Construction issues included design conservatism, water course crossings, winter construction, winter ditching, and public consultation. Examples of high strength steel pipe applications were also included with reference to experience gained by TransCanada and Corridor Pipeline. tabs., figs.