Role of calibration, validation, and relevance in multi-level uncertainty integration

International Nuclear Information System (INIS)

Li, Chenzhao; Mahadevan, Sankaran

2016-01-01

Calibration of model parameters is an essential step in predicting the response of a complicated system, but the lack of data at the system level makes it impossible to conduct this quantification directly. In such a situation, system model parameters are estimated using tests at lower levels of complexity which share the same model parameters with the system. For such a multi-level problem, this paper proposes a methodology to quantify the uncertainty in the system level prediction by integrating calibration, validation and sensitivity analysis at different levels. The proposed approach considers the validity of the models used for parameter estimation at lower levels, as well as the relevance at the lower level to the prediction at the system level. The model validity is evaluated using a model reliability metric, and models with multivariate output are considered. The relevance is quantified by comparing Sobol indices at the lower level and system level, thus measuring the extent to which a lower level test represents the characteristics of the system so that the calibration results can be reliably used in the system level. Finally the results of calibration, validation and relevance analysis are integrated in a roll-up method to predict the system output. - Highlights: • Relevance analysis to quantify the closeness of two models. • Stochastic model reliability metric to integrate multiple validation experiments. • Extend the model reliability metric to deal with multivariate output. • Roll-up formula to integrate calibration, validation, and relevance.

Structural Model Error and Decision Relevancy

Science.gov (United States)

Goldsby, M.; Lusk, G.

2017-12-01

The extent to which climate models can underwrite specific climate policies has long been a contentious issue. Skeptics frequently deny that climate models are trustworthy in an attempt to undermine climate action, whereas policy makers often desire information that exceeds the capabilities of extant models. While not skeptics, a group of mathematicians and philosophers [Frigg et al. (2014)] recently argued that even tiny differences between the structure of a complex dynamical model and its target system can lead to dramatic predictive errors, possibly resulting in disastrous consequences when policy decisions are based upon those predictions. They call this result the Hawkmoth effect (HME), and seemingly use it to rebuke rightwing proposals to forgo mitigation in favor of adaptation. However, a vigorous debate has emerged between Frigg et al. on one side and another philosopher-mathematician pair [Winsberg and Goodwin (2016)] on the other. On one hand, Frigg et al. argue that their result shifts the burden to climate scientists to demonstrate that their models do not fall prey to the HME. On the other hand, Winsberg and Goodwin suggest that arguments like those asserted by Frigg et al. can be, if taken seriously, "dangerous": they fail to consider the variety of purposes for which models can be used, and thus too hastily undermine large swaths of climate science. They put the burden back on Frigg et al. to show their result has any effect on climate science. This paper seeks to attenuate this debate by establishing an irenic middle position; we find that there is more agreement between sides than it first seems. We distinguish a `decision standard' from a `burden of proof', which helps clarify the contributions to the debate from both sides. In making this distinction, we argue that scientists bear the burden of assessing the consequences of HME, but that the standard Frigg et al. adopt for decision relevancy is too strict.

Phase diagram, thermodynamic investigations, and modelling of systems relevant to lithium-ion batteries

International Nuclear Information System (INIS)

Fuertauer, Siegfried; Beutl, Alexander; Flanorfer, Hans; Henriques, David; Giel, Hans; Markus, Thorsten

2017-01-01

This article reports on two consecutive joint projects titled ''Experimental Thermodynamics and Phase Relations of New Electrode Materials for Lithium-Ion Batteries'', which were performed in the framework of the WenDeLIB 1473 priority program ''Materials with new Design for Lithium Ion Batteries''. Hundreds of samples were synthesized using experimental techniques specifically developed to deal with highly reactive lithium and lithium-containing compounds to generate electrochemical, phase diagram and crystal structure data in the Cu-Li, Li-Sn, Li-Sb, Cu-Li-Sn, Cu-Li-Sb and selected oxide systems. The thermochemical and phase diagram data were subsequently used to develop self-consistent thermodynamic descriptions of several binary systems. In the present contribution, the experimental techniques, working procedures, results and their relevance to the development of new electrode materials for lithium ion batteries are discussed and summarized. The collaboration between the three groups has resulted in more than fifteen (15) published articles during the six-year funding period.

Phase diagram, thermodynamic investigations, and modelling of systems relevant to lithium-ion batteries

Energy Technology Data Exchange (ETDEWEB)

Fuertauer, Siegfried; Beutl, Alexander; Flanorfer, Hans [Vienna Univ. (Austria). Dept. of Inorganic Chemistry - Functional Materials; Li, Dajian; Cupid, Damian [Karlsruhe Institute of Technology (KIT), Eggenstein-Leopoldshafen (Germany). Inst. for Applied Materials - Applied Materials Physics (IAM-AWP); Henriques, David; Giel, Hans; Markus, Thorsten [Mannheim Univ. of Applied Sciences (Germany). Inst. for Thermo- and Fluiddynamics

2017-11-15

This article reports on two consecutive joint projects titled ''Experimental Thermodynamics and Phase Relations of New Electrode Materials for Lithium-Ion Batteries'', which were performed in the framework of the WenDeLIB 1473 priority program ''Materials with new Design for Lithium Ion Batteries''. Hundreds of samples were synthesized using experimental techniques specifically developed to deal with highly reactive lithium and lithium-containing compounds to generate electrochemical, phase diagram and crystal structure data in the Cu-Li, Li-Sn, Li-Sb, Cu-Li-Sn, Cu-Li-Sb and selected oxide systems. The thermochemical and phase diagram data were subsequently used to develop self-consistent thermodynamic descriptions of several binary systems. In the present contribution, the experimental techniques, working procedures, results and their relevance to the development of new electrode materials for lithium ion batteries are discussed and summarized. The collaboration between the three groups has resulted in more than fifteen (15) published articles during the six-year funding period.

Towards increased policy relevance in energy modeling

Energy Technology Data Exchange (ETDEWEB)

Worrell, Ernst; Ramesohl, Stephan; Boyd, Gale

2003-07-29

Historically, most energy models were reasonably equipped to assess the impact of a subsidy or change in taxation, but are often insufficient to assess the impact of more innovative policy instruments. We evaluate the models used to assess future energy use, focusing on industrial energy use. We explore approaches to engineering-economic analysis that could help improve the realism and policy relevance of engineering-economic modeling frameworks. We also explore solutions to strengthen the policy usefulness of engineering-economic analysis that can be built from a framework of multi-disciplinary cooperation. We focus on the so-called ''engineering-economic'' (or ''bottom-up'') models, as they include the amount of detail that is commonly needed to model policy scenarios. We identify research priorities for the modeling framework, technology representation in models, policy evaluation and modeling of decision-making behavior.

BROA: An agent-based model to recommend relevant Learning Objects from Repository Federations adapted to learner profile

Directory of Open Access Journals (Sweden)

Paula A. Rodríguez

2013-03-01

Full Text Available Learning Objects (LOs are distinguished from traditional educational resources for their easy and quickly availability through Web-based repositories, from which they are accessed through their metadata. In addition, having a user profile allows an educational recommender system to help the learner to find the most relevant LOs based on their needs and preferences. The aim of this paper is to propose an agent-based model so-called BROA to recommend relevant LOs recovered from Repository Federations as well as LOs adapted to learner profile. The model proposed uses both role and service models of GAIA methodology, and the analysis models of the MAS-CommonKADS methodology. A prototype was built based on this model and validated to obtain some assessing results that are finally presented.

Profiles of Dialogue for Relevance

Directory of Open Access Journals (Sweden)

Douglas Walton

2016-12-01

Full Text Available This paper uses argument diagrams, argumentation schemes, and some tools from formal argumentation systems developed in artificial intelligence to build a graph-theoretic model of relevance shown to be applicable (with some extensions as a practical method for helping a third party judge issues of relevance or irrelevance of an argument in real examples. Examples used to illustrate how the method works are drawn from disputes about relevance in natural language discourse, including a criminal trial and a parliamentary debate.

Agent-Based Modeling in Systems Pharmacology.

Science.gov (United States)

Cosgrove, J; Butler, J; Alden, K; Read, M; Kumar, V; Cucurull-Sanchez, L; Timmis, J; Coles, M

2015-11-01

Modeling and simulation (M&S) techniques provide a platform for knowledge integration and hypothesis testing to gain insights into biological systems that would not be possible a priori. Agent-based modeling (ABM) is an M&S technique that focuses on describing individual components rather than homogenous populations. This tutorial introduces ABM to systems pharmacologists, using relevant case studies to highlight how ABM-specific strengths have yielded success in the area of preclinical mechanistic modeling.

Relevant criteria for testing the quality of turbulence models

DEFF Research Database (Denmark)

Frandsen, Sten Tronæs; Ejsing Jørgensen, Hans; Sørensen, J.D.

2007-01-01

Seeking relevant criteria for testing the quality of turbulence models, the scale of turbulence and the gust factor have been estimated from data and compared with predictions from first-order models of these two quantities. It is found that the mean of the measured length scales is approx. 10......% smaller than the IEC model, for wind turbine hub height levels. The mean is only marginally dependent on trends in time series. It is also found that the coefficient of variation of the measured length scales is about 50%. 3sec and 10sec pre-averaging of wind speed data are relevant for MW-size wind...... turbines when seeking wind characteristics that correspond to one blade and the entire rotor, respectively. For heights exceeding 50-60m the gust factor increases with wind speed. For heights larger the 60-80m, present assumptions on the value of the gust factor are significantly conservative, both for 3...

To bail out or not to bail out systemically relevant financial institutions: The incentives of policy makers

Directory of Open Access Journals (Sweden)

Lucas Marc Fuhrer

2012-11-01

Full Text Available The recent financial crisis has shown that many financial institutions may be systemically relevant. Their bankruptcy would cause significant costs for the overall economy. However, a clear definition of systemic risks still does not exist. Thus, the decision, whether an institution is, or is not systemically relevant is in the end made by policy makers. This paper takes a closer look at the incentives available to policy makers and their influence on the bailout decision. In the model presented here it is possible to show, that too many financial institutions get bailed out, when assuming that policy makers tend to be more risk-averse than socially optimal. The costs due to this misallocation of resources can be significant.

Genetic mouse models relevant to schizophrenia: taking stock and looking forward.

Science.gov (United States)

Harrison, Paul J; Pritchett, David; Stumpenhorst, Katharina; Betts, Jill F; Nissen, Wiebke; Schweimer, Judith; Lane, Tracy; Burnet, Philip W J; Lamsa, Karri P; Sharp, Trevor; Bannerman, David M; Tunbridge, Elizabeth M

2012-03-01

Genetic mouse models relevant to schizophrenia complement, and have to a large extent supplanted, pharmacological and lesion-based rat models. The main attraction is that they potentially have greater construct validity; however, they share the fundamental limitations of all animal models of psychiatric disorder, and must also be viewed in the context of the uncertain and complex genetic architecture of psychosis. Some of the key issues, including the choice of gene to target, the manner of its manipulation, gene-gene and gene-environment interactions, and phenotypic characterization, are briefly considered in this commentary, illustrated by the relevant papers reported in this special issue. Copyright © 2011 Elsevier Ltd. All rights reserved.

Mathematical Properties Relevant to Geomagnetic Field Modeling

DEFF Research Database (Denmark)

Sabaka, Terence J.; Hulot, Gauthier; Olsen, Nils

2010-01-01

be directly measured. In this chapter, the mathematical foundation of global (as opposed to regional) geomagnetic field modeling is reviewed, and the spatial modeling of the field in spherical coordinates is focussed. Time can be dealt with as an independent variable and is not explicitly considered......Geomagnetic field modeling consists in converting large numbers of magnetic observations into a linear combination of elementary mathematical functions that best describes those observations.The set of numerical coefficients defining this linear combination is then what one refers.......The relevant elementary mathematical functions are introduced, their properties are reviewed, and how they can be used to describe the magnetic field in a source-free (such as the Earth’s neutral atmosphere) or source-dense (such as the ionosphere) environment is explained. Completeness and uniqueness...

Mathematical Properties Relevant to Geomagnetic Field Modeling

DEFF Research Database (Denmark)

Sabaka, Terence J.; Hulot, Gauthier; Olsen, Nils

2014-01-01

be directly measured. In this chapter, the mathematical foundation of global (as opposed to regional) geomagnetic field modeling is reviewed, and the spatial modeling of the field in spherical coordinates is focused. Time can be dealt with as an independent variable and is not explicitly considered......Geomagnetic field modeling consists in converting large numbers of magnetic observations into a linear combination of elementary mathematical functions that best describes those observations. The set of numerical coefficients defining this linear combination is then what one refers....... The relevant elementary mathematical functions are introduced, their properties are reviewed, and how they can be used to describe the magnetic field in a source-free (such as the Earth’s neutral atmosphere) or source-dense (such as the ionosphere) environment is explained. Completeness and uniqueness...

Modelling of functional systems of managerial accounting

Directory of Open Access Journals (Sweden)

O.V. Fomina

2017-12-01

Full Text Available The modern stage of managerial accounting development takes place under the powerful influence of managerial innovations. The article aimed at the development of integrational model of budgeting and the system of balanced indices in the system of managerial accounting that will contribute the increasing of relevance for making managerial decisions by managers of different levels management. As a result of the study the author proposed the highly pragmatical integration model of budgeting and system of the balanced indices in the system of managerial accounting, which is realized by the development of the system of gathering, consolidation, analysis, and interpretation of financial and nonfinancial information, contributes the increasing of relevance for making managerial decisions on the base of coordination and effective and purpose orientation both strategical and operative resources of an enterprise. The effective integrational process of the system components makes it possible to distribute limited resources rationally taking into account prospective purposes and strategic initiatives, to carry

Macroscale hydrologic modeling of ecologically relevant flow metrics

Science.gov (United States)

Wenger, Seth J.; Luce, Charles H.; Hamlet, Alan F.; Isaak, Daniel J.; Neville, Helen M.

2010-09-01

Stream hydrology strongly affects the structure of aquatic communities. Changes to air temperature and precipitation driven by increased greenhouse gas concentrations are shifting timing and volume of streamflows potentially affecting these communities. The variable infiltration capacity (VIC) macroscale hydrologic model has been employed at regional scales to describe and forecast hydrologic changes but has been calibrated and applied mainly to large rivers. An important question is how well VIC runoff simulations serve to answer questions about hydrologic changes in smaller streams, which are important habitat for many fish species. To answer this question, we aggregated gridded VIC outputs within the drainage basins of 55 streamflow gages in the Pacific Northwest United States and compared modeled hydrographs and summary metrics to observations. For most streams, several ecologically relevant aspects of the hydrologic regime were accurately modeled, including center of flow timing, mean annual and summer flows and frequency of winter floods. Frequencies of high and low flows in the summer were not well predicted, however. Predictions were worse for sites with strong groundwater influence, and some sites showed errors that may result from limitations in the forcing climate data. Higher resolution (1/16th degree) modeling provided small improvements over lower resolution (1/8th degree). Despite some limitations, the VIC model appears capable of representing several ecologically relevant hydrologic characteristics in streams, making it a useful tool for understanding the effects of hydrology in delimiting species distributions and predicting the potential effects of climate shifts on aquatic organisms.

Other relevant numerical modelling papers

International Nuclear Information System (INIS)

Chartier, M.

1989-01-01

The ocean modelling is a rapidly evolving science and a large number of results have been published. Several categories of papers are of particular interest for this review: the papers published by the international atomic institutions, such as the NEA (for the CRESP or Subseabed Programs), the IAEA (for example the Safety Series, the Technical Report Series or the TECDOC), and the ICRP, and the papers concerned by more fundamental research, which are published in specific scientific literature. This paper aims to list some of the most relevant publications for the CRESP purposes. It means by no way to be exhaustive, but informative on the incontestable progress recently achieved in that field. One should note that some of these papers are so recent that their final version has not yet been published

Stability of Naturally Relevant Ternary Phases in the Cu–Sn–S system in Contact with an Aqueous Solution

Directory of Open Access Journals (Sweden)

Andrea Giaccherini

2016-07-01

Full Text Available A relevant research effort is devoted to the synthesis and characterization of phases belonging to the ternary system Cu–Sn–S, mainly for their possible applications in semiconductor technology. Among all ternary phases, kuramite, Cu3SnS4, mohite, Cu2SnS3, and Cu4Sn7S16 have attracted the highest interest. Numerous studies were carried out claiming for the description of new phases in the ternary compositional field. In this study, we revise the existing literature on this ternary system, with a special focus on the phases stable in a temperature range at 25 °C. The only two ternary phases observed in nature are mohite and kuramite. Their occurrence is described as very rare. A numerical modelling of the stable solid phases in contact with a water solution was underwent to define stability relationships of the relevant phases of the system. The numerical modelling of the Eh-pH diagrams was carried out through the phreeqc software with the lnll.dat thermodynamic database. Owing to the complexity of this task, the subsystems Cu–O–H, Sn–O–H, Cu–S–O–H and Sn–S–O–H were firstly considered. The first Pourbaix diagram for the two naturally relevant ternary phases is then proposed.

Assessment of efficiency of functioning the infocommunication systems a special purpose in the conditions of violation quality of relevance information

Science.gov (United States)

Parinov, A. V.; Korotkikh, L. P.; Desyatov, D. B.; Stepanov, L. V.

2018-03-01

The uniqueness of information processing mechanisms in special-purpose infocommunication systems and the increased interest of intruders lead to an increase in the relevance of the problems associated with their protection. The paper considers the issues of building risk-models for the violation of the relevance and value of information in infocommunication systems for special purposes. Also, special attention is paid to the connection between the qualities of relevance and the value of information obtained as a result of the operation of infocommunication systems for special purposes. Analytical expressions for the risk and damage function in the time range in special-purpose infocommunication systems are obtained, which can serve as a mathematical basis for risk assessment. Further, an analytical expression is obtained to assess the chance of obtaining up-to-date information in the operation of infocommunication systems up to the time the information quality is violated. An analytical expression for estimating the chance can be used to calculate the effectiveness of a special-purpose infocommunication system.

Intertwining personal and reward relevance: evidence from the drift-diffusion model.

Science.gov (United States)

Yankouskaya, A; Bührle, R; Lugt, E; Stolte, M; Sui, J

2018-01-24

In their seminal paper 'Is our self nothing but reward', Northoff and Hayes (Biol Psychiatry 69(11):1019-1025, Northoff, Hayes, Biological Psychiatry 69(11):1019-1025, 2011) proposed three models of the relationship between self and reward and opened a continuing debate about how these different fields can be linked. To date, none of the proposed models received strong empirical support. The present study tested common and distinct effects of personal relevance and reward values by de-componenting different stages of perceptual decision making using a drift-diffusion approach. We employed a recently developed associative matching paradigm where participants (N = 40) formed mental associations between five geometric shapes and five labels referring personal relevance in the personal task, or five shape-label pairings with different reward values in the reward task and then performed a matching task by indicating whether a displayed shape-label pairing was correct or incorrect. We found that common effects of personal relevance and monetary reward were manifested in the facilitation of behavioural performance for high personal relevance and high reward value as socially important signals. The differential effects between personal and monetary relevance reflected non-decisional time in a perceptual decision process, and task-specific prioritization of stimuli. Our findings support the parallel processing model (Northoff & Hayes, Biol Psychiatry 69(11):1019-1025, Northoff, Hayes, Biological Psychiatry 69(11):1019-1025, 2011) and suggest that self-specific processing occurs in parallel with high reward processing. Limitations and further directions are discussed.

A dispersion modelling system for urban air pollution

Energy Technology Data Exchange (ETDEWEB)

Karppinen, A.; Kukkonen, J.; Nordlund, G.; Rantakrans, E.; Valkama, I.

1998-10-01

An Urban Dispersion Modelling system UDM-FMI, developed at the Finnish Meteorological Institute is described in the report. The modelling system includes a multiple source Gaussian plume model and a meteorological pre-processing model. The dispersion model is an integrated urban scale model, taking into account of all source categories (point, line, area and volume sources). It includes a treatment of chemical transformation (for NO{sub 2}) wet and dry deposition (for SO{sub 2}) plume rise, downwash phenomena and dispersion of inert particles. The model allows also for the influence of a finite mixing height. The model structure is mainly based on the state-of-the-art methodology. The system also computes statistical parameters from the time series, which can be compared to air quality guidelines. The relevant meteorological parameters for the dispersion model are evaluated using data produced by a meteorological pre-processor. The model is based mainly on the energy budget method. Results of national investigations have been used for evaluating climate-dependent parameters. The model utilises the synoptic meteorological observations, radiation records and aerological sounding observations. The model results include the hourly time series of the relevant atmospheric turbulence 51 refs.

Experimental Models of Vaginal Candidiasis and Their Relevance to Human Candidiasis

Science.gov (United States)

Sobel, Jack D.

2016-01-01

Vulvovaginal candidiasis (VVC) is a high-incidence disease seriously affecting the quality of life of women worldwide, particularly in its chronic, recurrent forms (RVVC), and with no definitive cure or preventive measure. Experimental studies in currently used rat and mouse models of vaginal candidiasis have generated a large mass of data on pathogenicity determinants and inflammation and immune responses of potential importance for the control of human pathology. However, reflection is necessary about the relevance of these rodent models to RVVC. Here we examine the chemical, biochemical, and biological factors that determine or contrast the forms of the disease in rodent models and in women and highlight the differences between them. We also appeal for approaches to improve or replace the current models in order to enhance their relevance to human infection. PMID:26883592

Model Driven Development of Data Sensitive Systems

DEFF Research Database (Denmark)

Olsen, Petur

2014-01-01

storage systems, where the actual values of the data is not relevant for the behavior of the system. For many systems the values are important. For instance the control flow of the system can be dependent on the input values. We call this type of system data sensitive, as the execution is sensitive...... to the values of variables. This theses strives to improve model-driven development of such data-sensitive systems. This is done by addressing three research questions. In the first we combine state-based modeling and abstract interpretation, in order to ease modeling of data-sensitive systems, while allowing...... efficient model-checking and model-based testing. In the second we develop automatic abstraction learning used together with model learning, in order to allow fully automatic learning of data-sensitive systems to allow learning of larger systems. In the third we develop an approach for modeling and model-based...

The System Dynamics Model for Development of Organic Agriculture

Science.gov (United States)

Rozman, Črtomir; Škraba, Andrej; Kljajić, Miroljub; Pažek, Karmen; Bavec, Martina; Bavec, Franci

2008-10-01

Organic agriculture is the highest environmentally valuable agricultural system, and has strategic importance at national level that goes beyond the interests of agricultural sector. In this paper we address development of organic farming simulation model based on a system dynamics methodology (SD). The system incorporates relevant variables, which affect the development of the organic farming. The group decision support system (GDSS) was used in order to identify most relevant variables for construction of causal loop diagram and further model development. The model seeks answers to strategic questions related to the level of organically utilized area, levels of production and crop selection in a long term dynamic context and will be used for simulation of different policy scenarios for organic farming and their impact on economic and environmental parameters of organic production at an aggregate level.

Implementation of a Sage-Based Stirling Model Into a System-Level Numerical Model of the Fission Power System Technology Demonstration Unit

Science.gov (United States)

Briggs, Maxwell H.

2011-01-01

The Fission Power System (FPS) project is developing a Technology Demonstration Unit (TDU) to verify the performance and functionality of a subscale version of the FPS reference concept in a relevant environment, and to verify component and system models. As hardware is developed for the TDU, component and system models must be refined to include the details of specific component designs. This paper describes the development of a Sage-based pseudo-steady-state Stirling convertor model and its implementation into a system-level model of the TDU.

Modeling and simulation of blood collection systems.

Science.gov (United States)

Alfonso, Edgar; Xie, Xiaolan; Augusto, Vincent; Garraud, Olivier

2012-03-01

This paper addresses the modeling and simulation of blood collection systems in France for both fixed site and mobile blood collection with walk in whole blood donors and scheduled plasma and platelet donors. Petri net models are first proposed to precisely describe different blood collection processes, donor behaviors, their material/human resource requirements and relevant regulations. Petri net models are then enriched with quantitative modeling of donor arrivals, donor behaviors, activity times and resource capacity. Relevant performance indicators are defined. The resulting simulation models can be straightforwardly implemented with any simulation language. Numerical experiments are performed to show how the simulation models can be used to select, for different walk in donor arrival patterns, appropriate human resource planning and donor appointment strategies.

Towards Increased Relevance: Context-Adapted Models of the Learning Organization

Science.gov (United States)

Örtenblad, Anders

2015-01-01

Purpose: The purposes of this paper are to take a closer look at the relevance of the idea of the learning organization for organizations in different generalized organizational contexts; to open up for the existence of multiple, context-adapted models of the learning organization; and to suggest a number of such models.…

Spatio-temporal modeling of nonlinear distributed parameter systems

CERN Document Server

Li, Han-Xiong

2011-01-01

The purpose of this volume is to provide a brief review of the previous work on model reduction and identifi cation of distributed parameter systems (DPS), and develop new spatio-temporal models and their relevant identifi cation approaches. In this book, a systematic overview and classifi cation on the modeling of DPS is presented fi rst, which includes model reduction, parameter estimation and system identifi cation. Next, a class of block-oriented nonlinear systems in traditional lumped parameter systems (LPS) is extended to DPS, which results in the spatio-temporal Wiener and Hammerstein s

Integrating retention soil filters into urban hydrologic models - Relevant processes and important parameters

Science.gov (United States)

Bachmann-Machnik, Anna; Meyer, Daniel; Waldhoff, Axel; Fuchs, Stephan; Dittmer, Ulrich

2018-04-01

Retention Soil Filters (RSFs), a form of vertical flow constructed wetlands specifically designed for combined sewer overflow (CSO) treatment, have proven to be an effective tool to mitigate negative impacts of CSOs on receiving water bodies. Long-term hydrologic simulations are used to predict the emissions from urban drainage systems during planning of stormwater management measures. So far no universally accepted model for RSF simulation exists. When simulating hydraulics and water quality in RSFs, an appropriate level of detail must be chosen for reasonable balancing between model complexity and model handling, considering the model input's level of uncertainty. The most crucial parameters determining the resultant uncertainties of the integrated sewer system and filter bed model were identified by evaluating a virtual drainage system with a Retention Soil Filter for CSO treatment. To determine reasonable parameter ranges for RSF simulations, data of 207 events from six full-scale RSF plants in Germany were analyzed. Data evaluation shows that even though different plants with varying loading and operation modes were examined, a simple model is sufficient to assess relevant suspended solids (SS), chemical oxygen demand (COD) and NH4 emissions from RSFs. Two conceptual RSF models with different degrees of complexity were assessed. These models were developed based on evaluation of data from full scale RSF plants and column experiments. Incorporated model processes are ammonium adsorption in the filter layer and degradation during subsequent dry weather period, filtration of SS and particulate COD (XCOD) to a constant background concentration and removal of solute COD (SCOD) by a constant removal rate during filter passage as well as sedimentation of SS and XCOD in the filter overflow. XCOD, SS and ammonium loads as well as ammonium concentration peaks are discharged primarily via RSF overflow not passing through the filter bed. Uncertainties of the integrated

“Zebrafishing” for Novel Genes Relevant to the Glomerular Filtration Barrier

Directory of Open Access Journals (Sweden)

Nils Hanke

2013-01-01

Full Text Available Data for genes relevant to glomerular filtration barrier function or proteinuria is continually increasing in an era of microarrays, genome-wide association studies, and quantitative trait locus analysis. Researchers are limited by published literature searches to select the most relevant genes to investigate. High-throughput cell cultures and other in vitro systems ultimately need to demonstrate proof in an in vivo model. Generating mammalian models for the genes of interest is costly and time intensive, and yields only a small number of test subjects. These models also have many pitfalls such as possible embryonic mortality and failure to generate phenotypes or generate nonkidney specific phenotypes. Here we describe an in vivo zebrafish model as a simple vertebrate screening system to identify genes relevant to glomerular filtration barrier function. Using our technology, we are able to screen entirely novel genes in 4–6 weeks in hundreds of live test subjects at a fraction of the cost of a mammalian model. Our system produces consistent and reliable evidence for gene relevance in glomerular kidney disease; the results then provide merit for further analysis in mammalian models.

Why relevance theory is relevant for lexicography

DEFF Research Database (Denmark)

Bothma, Theo; Tarp, Sven

2014-01-01

This article starts by providing a brief summary of relevance theory in information science in relation to the function theory of lexicography, explaining the different types of relevance, viz. objective system relevance and the subjective types of relevance, i.e. topical, cognitive, situational...... that is very important for lexicography as well as for information science, viz. functional relevance. Since all lexicographic work is ultimately aimed at satisfying users’ information needs, the article then discusses why the lexicographer should take note of all these types of relevance when planning a new...... dictionary project, identifying new tasks and responsibilities of the modern lexicographer. The article furthermore discusses how relevance theory impacts on teaching dictionary culture and reference skills. By integrating insights from lexicography and information science, the article contributes to new...

The LAILAPS search engine: a feature model for relevance ranking in life science databases.

Science.gov (United States)

Lange, Matthias; Spies, Karl; Colmsee, Christian; Flemming, Steffen; Klapperstück, Matthias; Scholz, Uwe

2010-03-25

Efficient and effective information retrieval in life sciences is one of the most pressing challenge in bioinformatics. The incredible growth of life science databases to a vast network of interconnected information systems is to the same extent a big challenge and a great chance for life science research. The knowledge found in the Web, in particular in life-science databases, are a valuable major resource. In order to bring it to the scientist desktop, it is essential to have well performing search engines. Thereby, not the response time nor the number of results is important. The most crucial factor for millions of query results is the relevance ranking. In this paper, we present a feature model for relevance ranking in life science databases and its implementation in the LAILAPS search engine. Motivated by the observation of user behavior during their inspection of search engine result, we condensed a set of 9 relevance discriminating features. These features are intuitively used by scientists, who briefly screen database entries for potential relevance. The features are both sufficient to estimate the potential relevance, and efficiently quantifiable. The derivation of a relevance prediction function that computes the relevance from this features constitutes a regression problem. To solve this problem, we used artificial neural networks that have been trained with a reference set of relevant database entries for 19 protein queries. Supporting a flexible text index and a simple data import format, this concepts are implemented in the LAILAPS search engine. It can easily be used both as search engine for comprehensive integrated life science databases and for small in-house project databases. LAILAPS is publicly available for SWISSPROT data at http://lailaps.ipk-gatersleben.de.

Relevance of the formal red meat classification system to the South ...

African Journals Online (AJOL)

Relevance of the formal red meat classification system to the South African ... to market information make them less willing to sell their animals through the formal market. ... Keywords: Communal farmers, marketing system, meat industry ...

Models of the Economic Growth and their Relevance

Directory of Open Access Journals (Sweden)

Nicolae MOROIANU

2012-06-01

Full Text Available Until few years ago, the economic growth was something perfect normal, part of an era marked by the transformation speed. Normality itself has been transformed and we currently are influenced by other rules, unknown yet, which should answer the question: “How do we return to the economic growth?” The economic growth and the models aiming to solve this problem concern the economic history even since its beginnings. In this paper we would like to find out what is the relevance that the well-known macroeconomic models still have and which might be their applicability level in a framework created by a black swan event type.

[The G-DRG System 2009--relevant changes for rheumatology].

Science.gov (United States)

Fiori, W; Liedtke-Dyong, A; Lakomek, H-J; Buscham, K; Lehmann, H; Liman, W; Fuchs, A-K; Bessler, F; Roeder, N

2010-05-01

The following article presents the major general and specific changes in the G-DRG system, in the classification systems for diagnoses and procedures as well as for the billing process for 2010. Since the G-DRG system is primarily a tool for the redistribution of resources, every hospital needs to analyze the economic effects of the changes by applying the G-DRG transition-grouper to its own cases. Depending on their clinical focus, rheumatological departments may experience positive or negative consequences from the adjustments. In addition, relevant current case law is considered.

On sampling and modeling complex systems

International Nuclear Information System (INIS)

Marsili, Matteo; Mastromatteo, Iacopo; Roudi, Yasser

2013-01-01

The study of complex systems is limited by the fact that only a few variables are accessible for modeling and sampling, which are not necessarily the most relevant ones to explain the system behavior. In addition, empirical data typically undersample the space of possible states. We study a generic framework where a complex system is seen as a system of many interacting degrees of freedom, which are known only in part, that optimize a given function. We show that the underlying distribution with respect to the known variables has the Boltzmann form, with a temperature that depends on the number of unknown variables. In particular, when the influence of the unknown degrees of freedom on the known variables is not too irregular, the temperature decreases as the number of variables increases. This suggests that models can be predictable only when the number of relevant variables is less than a critical threshold. Concerning sampling, we argue that the information that a sample contains on the behavior of the system is quantified by the entropy of the frequency with which different states occur. This allows us to characterize the properties of maximally informative samples: within a simple approximation, the most informative frequency size distributions have power law behavior and Zipf’s law emerges at the crossover between the under sampled regime and the regime where the sample contains enough statistics to make inferences on the behavior of the system. These ideas are illustrated in some applications, showing that they can be used to identify relevant variables or to select the most informative representations of data, e.g. in data clustering. (paper)

System Identification, Environmental Modelling, and Control System Design

CERN Document Server

Garnier, Hugues

2012-01-01

System Identification, Environmetric Modelling, and Control Systems Design is dedicated to Professor Peter Young on the occasion of his seventieth birthday. Professor Young has been a pioneer in systems and control, and over the past 45 years he has influenced many developments in this field. This volume is comprised of a collection of contributions by leading experts in system identification, time-series analysis, environmetric modelling and control system design – modern research in topics that reflect important areas of interest in Professor Young’s research career. Recent theoretical developments in and relevant applications of these areas are explored treating the various subjects broadly and in depth. The authoritative and up-to-date research presented here will be of interest to academic researcher in control and disciplines related to environmental research, particularly those to with water systems. The tutorial style in which many of the contributions are composed also makes the book suitable as ...

A hierarchy for modeling high speed propulsion systems

Science.gov (United States)

Hartley, Tom T.; Deabreu, Alex

1991-01-01

General research efforts on reduced order propulsion models for control systems design are overviewed. Methods for modeling high speed propulsion systems are discussed including internal flow propulsion systems that do not contain rotating machinery such as inlets, ramjets, and scramjets. The discussion is separated into four sections: (1) computational fluid dynamics model for the entire nonlinear system or high order nonlinear models; (2) high order linearized model derived from fundamental physics; (3) low order linear models obtained from other high order models; and (4) low order nonlinear models. Included are special considerations on any relevant control system designs. The methods discussed are for the quasi-one dimensional Euler equations of gasdynamic flow. The essential nonlinear features represented are large amplitude nonlinear waves, moving normal shocks, hammershocks, subsonic combustion via heat addition, temperature dependent gases, detonation, and thermal choking.

Do recommender systems benefit users? a modeling approach

Science.gov (United States)

Yeung, Chi Ho

2016-04-01

Recommender systems are present in many web applications to guide purchase choices. They increase sales and benefit sellers, but whether they benefit customers by providing relevant products remains less explored. While in many cases the recommended products are relevant to users, in other cases customers may be tempted to purchase the products only because they are recommended. Here we introduce a model to examine the benefit of recommender systems for users, and find that recommendations from the system can be equivalent to random draws if one always follows the recommendations and seldom purchases according to his or her own preference. Nevertheless, with sufficient information about user preferences, recommendations become accurate and an abrupt transition to this accurate regime is observed for some of the studied algorithms. On the other hand, we find that high estimated accuracy indicated by common accuracy metrics is not necessarily equivalent to high real accuracy in matching users with products. This disagreement between estimated and real accuracy serves as an alarm for operators and researchers who evaluate recommender systems merely with accuracy metrics. We tested our model with a real dataset and observed similar behaviors. Finally, a recommendation approach with improved accuracy is suggested. These results imply that recommender systems can benefit users, but the more frequently a user purchases the recommended products, the less relevant the recommended products are in matching user taste.

Computational Modeling of Biological Systems From Molecules to Pathways

CERN Document Server

2012-01-01

Computational modeling is emerging as a powerful new approach for studying and manipulating biological systems. Many diverse methods have been developed to model, visualize, and rationally alter these systems at various length scales, from atomic resolution to the level of cellular pathways. Processes taking place at larger time and length scales, such as molecular evolution, have also greatly benefited from new breeds of computational approaches. Computational Modeling of Biological Systems: From Molecules to Pathways provides an overview of established computational methods for the modeling of biologically and medically relevant systems. It is suitable for researchers and professionals working in the fields of biophysics, computational biology, systems biology, and molecular medicine.

The relevance of non-human primate and rodent malaria models for humans

Directory of Open Access Journals (Sweden)

Riley Eleanor

2011-02-01

Full Text Available Abstract At the 2010 Keystone Symposium on "Malaria: new approaches to understanding Host-Parasite interactions", an extra scientific session to discuss animal models in malaria research was convened at the request of participants. This was prompted by the concern of investigators that skepticism in the malaria community about the use and relevance of animal models, particularly rodent models of severe malaria, has impacted on funding decisions and publication of research using animal models. Several speakers took the opportunity to demonstrate the similarities between findings in rodent models and human severe disease, as well as points of difference. The variety of malaria presentations in the different experimental models parallels the wide diversity of human malaria disease and, therefore, might be viewed as a strength. Many of the key features of human malaria can be replicated in a variety of nonhuman primate models, which are very under-utilized. The importance of animal models in the discovery of new anti-malarial drugs was emphasized. The major conclusions of the session were that experimental and human studies should be more closely linked so that they inform each other, and that there should be wider access to relevant clinical material.

Towards policy relevant environmental modeling: contextual validity and pragmatic models

Science.gov (United States)

Miles, Scott B.

2000-01-01

"What makes for a good model?" In various forms, this question is a question that, undoubtedly, many people, businesses, and institutions ponder with regards to their particular domain of modeling. One particular domain that is wrestling with this question is the multidisciplinary field of environmental modeling. Examples of environmental models range from models of contaminated ground water flow to the economic impact of natural disasters, such as earthquakes. One of the distinguishing claims of the field is the relevancy of environmental modeling to policy and environment-related decision-making in general. A pervasive view by both scientists and decision-makers is that a "good" model is one that is an accurate predictor. Thus, determining whether a model is "accurate" or "correct" is done by comparing model output to empirical observations. The expected outcome of this process, usually referred to as "validation" or "ground truthing," is a stamp on the model in question of "valid" or "not valid" that serves to indicate whether or not the model will be reliable before it is put into service in a decision-making context. In this paper, I begin by elaborating on the prevailing view of model validation and why this view must change. Drawing from concepts coming out of the studies of science and technology, I go on to propose a contextual view of validity that can overcome the problems associated with "ground truthing" models as an indicator of model goodness. The problem of how we talk about and determine model validity has much to do about how we perceive the utility of environmental models. In the remainder of the paper, I argue that we should adopt ideas of pragmatism in judging what makes for a good model and, in turn, developing good models. From such a perspective of model goodness, good environmental models should facilitate communication, convey—not bury or "eliminate"—uncertainties, and, thus, afford the active building of consensus decisions, instead

Development of a novel, physiologically relevant cytotoxicity model: Application to the study of chemotherapeutic damage to mesenchymal stromal cells

International Nuclear Information System (INIS)

May, Jennifer E.; Morse, H. Ruth; Xu, Jinsheng; Donaldson, Craig

2012-01-01

There is an increasing need for development of physiologically relevant in-vitro models for testing toxicity, however determining toxic effects of agents which undergo extensive hepatic metabolism can be particularly challenging. If a source of such metabolic enzymes is inadequate within a model system, toxicity from prodrugs may be grossly underestimated. Conversely, the vast majority of agents are detoxified by the liver, consequently toxicity from such agents may be overestimated. In this study we describe the development of a novel in-vitro model, which could be adapted for any toxicology setting. The model utilises HepG2 liver spheroids as a source of metabolic enzymes, which have been shown to more closely resemble human liver than traditional monolayer cultures. A co-culture model has been developed enabling the effect of any metabolised agent on another cell type to be assessed. This has been optimised to enable the study of damaging effects of chemotherapy on mesenchymal stem cells (MSC), the supportive stem cells of the bone marrow. Several optimisation steps were undertaken, including determining optimal culture conditions, confirmation of hepatic P450 enzyme activity and ensuring physiologically relevant doses of chemotherapeutic agents were appropriate for use within the model. The developed model was subsequently validated using several chemotherapeutic agents, both prodrugs and active drugs, with resulting MSC damage closely resembling effects seen in patients following chemotherapy. Minimal modifications would enable this novel co-culture model to be utilised as a general toxicity model, contributing to the drive to reduce animal safety testing and enabling physiologically relevant in-vitro study. -- Highlights: ► An in vitro model was developed for study of drugs requiring hepatic metabolism ► HepG2 spheroids were utilised as a physiologically relevant source of liver enzymes ► The model was optimised to enable study of chemotherapeutic

Development of a novel, physiologically relevant cytotoxicity model: Application to the study of chemotherapeutic damage to mesenchymal stromal cells

Energy Technology Data Exchange (ETDEWEB)

May, Jennifer E., E-mail: Jennifer2.May@uwe.ac.uk; Morse, H. Ruth, E-mail: Ruth.Morse@uwe.ac.uk; Xu, Jinsheng, E-mail: Jinsheng.Xu@uwe.ac.uk; Donaldson, Craig, E-mail: Craig.Donaldson@uwe.ac.uk

2012-09-15

There is an increasing need for development of physiologically relevant in-vitro models for testing toxicity, however determining toxic effects of agents which undergo extensive hepatic metabolism can be particularly challenging. If a source of such metabolic enzymes is inadequate within a model system, toxicity from prodrugs may be grossly underestimated. Conversely, the vast majority of agents are detoxified by the liver, consequently toxicity from such agents may be overestimated. In this study we describe the development of a novel in-vitro model, which could be adapted for any toxicology setting. The model utilises HepG2 liver spheroids as a source of metabolic enzymes, which have been shown to more closely resemble human liver than traditional monolayer cultures. A co-culture model has been developed enabling the effect of any metabolised agent on another cell type to be assessed. This has been optimised to enable the study of damaging effects of chemotherapy on mesenchymal stem cells (MSC), the supportive stem cells of the bone marrow. Several optimisation steps were undertaken, including determining optimal culture conditions, confirmation of hepatic P450 enzyme activity and ensuring physiologically relevant doses of chemotherapeutic agents were appropriate for use within the model. The developed model was subsequently validated using several chemotherapeutic agents, both prodrugs and active drugs, with resulting MSC damage closely resembling effects seen in patients following chemotherapy. Minimal modifications would enable this novel co-culture model to be utilised as a general toxicity model, contributing to the drive to reduce animal safety testing and enabling physiologically relevant in-vitro study. -- Highlights: ► An in vitro model was developed for study of drugs requiring hepatic metabolism ► HepG2 spheroids were utilised as a physiologically relevant source of liver enzymes ► The model was optimised to enable study of chemotherapeutic

Complex Systems and Self-organization Modelling

CERN Document Server

Bertelle, Cyrille; Kadri-Dahmani, Hakima

2009-01-01

The concern of this book is the use of emergent computing and self-organization modelling within various applications of complex systems. The authors focus their attention both on the innovative concepts and implementations in order to model self-organizations, but also on the relevant applicative domains in which they can be used efficiently. This book is the outcome of a workshop meeting within ESM 2006 (Eurosis), held in Toulouse, France in October 2006.

A content relevance model for social media health information.

Science.gov (United States)

Prybutok, Gayle Linda; Koh, Chang; Prybutok, Victor R

2014-04-01

Consumer health informatics includes the development and implementation of Internet-based systems to deliver health risk management information and health intervention applications to the public. The application of consumer health informatics to educational and interventional efforts such as smoking reduction and cessation has garnered attention from both consumers and health researchers in recent years. Scientists believe that smoking avoidance or cessation before the age of 30 years can prevent more than 90% of smoking-related cancers and that individuals who stop smoking fare as well in preventing cancer as those who never start. The goal of this study was to determine factors that were most highly correlated with content relevance for health information provided on the Internet for a study group of 18- to 30-year-old college students. Data analysis showed that the opportunity for convenient entertainment, social interaction, health information-seeking behavior, time spent surfing on the Internet, the importance of available activities on the Internet (particularly e-mail), and perceived site relevance for Internet-based sources of health information were significantly correlated with content relevance for 18- to 30-year-old college students, an educated subset of this population segment.

Review: To be or not to be an identifiable model. Is this a relevant question in animal science modelling?

Science.gov (United States)

Muñoz-Tamayo, R; Puillet, L; Daniel, J B; Sauvant, D; Martin, O; Taghipoor, M; Blavy, P

2018-04-01

What is a good (useful) mathematical model in animal science? For models constructed for prediction purposes, the question of model adequacy (usefulness) has been traditionally tackled by statistical analysis applied to observed experimental data relative to model-predicted variables. However, little attention has been paid to analytic tools that exploit the mathematical properties of the model equations. For example, in the context of model calibration, before attempting a numerical estimation of the model parameters, we might want to know if we have any chance of success in estimating a unique best value of the model parameters from available measurements. This question of uniqueness is referred to as structural identifiability; a mathematical property that is defined on the sole basis of the model structure within a hypothetical ideal experiment determined by a setting of model inputs (stimuli) and observable variables (measurements). Structural identifiability analysis applied to dynamic models described by ordinary differential equations (ODEs) is a common practice in control engineering and system identification. This analysis demands mathematical technicalities that are beyond the academic background of animal science, which might explain the lack of pervasiveness of identifiability analysis in animal science modelling. To fill this gap, in this paper we address the analysis of structural identifiability from a practitioner perspective by capitalizing on the use of dedicated software tools. Our objectives are (i) to provide a comprehensive explanation of the structural identifiability notion for the community of animal science modelling, (ii) to assess the relevance of identifiability analysis in animal science modelling and (iii) to motivate the community to use identifiability analysis in the modelling practice (when the identifiability question is relevant). We focus our study on ODE models. By using illustrative examples that include published

Model Predictive Engine Air-Ratio Control Using Online Sequential Relevance Vector Machine

Directory of Open Access Journals (Sweden)

Hang-cheong Wong

2012-01-01

Full Text Available Engine power, brake-specific fuel consumption, and emissions relate closely to air ratio (i.e., lambda among all the engine variables. An accurate and adaptive model for lambda prediction is essential to effective lambda control for long term. This paper utilizes an emerging technique, relevance vector machine (RVM, to build a reliable time-dependent lambda model which can be continually updated whenever a sample is added to, or removed from, the estimated lambda model. The paper also presents a new model predictive control (MPC algorithm for air-ratio regulation based on RVM. This study shows that the accuracy, training, and updating time of the RVM model are superior to the latest modelling methods, such as diagonal recurrent neural network (DRNN and decremental least-squares support vector machine (DLSSVM. Moreover, the control algorithm has been implemented on a real car to test. Experimental results reveal that the control performance of the proposed relevance vector machine model predictive controller (RVMMPC is also superior to DRNNMPC, support vector machine-based MPC, and conventional proportional-integral (PI controller in production cars. Therefore, the proposed RVMMPC is a promising scheme to replace conventional PI controller for engine air-ratio control.

[G-DRG system 2009: relevant changes for rheumatology].

Science.gov (United States)

Fiori, W; Liedtke-Dyong, A; Lakomek, H-J; Buscham, K; Lehmann, H; Liman, W; Fuchs, A-K; Bessler, F; Roeder, N

2009-08-01

The following article presents the main general and specific changes in the G-DRG (German diagnosis-related groups) system in terms of the classification systems for diagnoses and procedures as well as the billing process for 2009. Of fundamental relevance is the national weighting of the G-DRG I97Z (complex rheumatologic treatment), which up to now had to be negotiated individually by each hospital. Emphasis is also put on case auditing by the health insurers. Being primarily a tool for redistribution of resources, every hospital has to analyze the economic effects of the 2009 G-DRG system by applying the G-DRG transition grouper to its own cases. Depending on their clinical focus rheumatological departments may experience positive or negative consequences from the development. The strain imposed on hospitals by inadequate refunding of rising costs has to be assessed separately from the effects of redistribution by the G-DRG system.

The Collection of Event Data and its Relevance to the Optimisation of Decay Heat Rejection Systems

International Nuclear Information System (INIS)

Roughley, R.; Jones, N.

1975-01-01

The precision with which the reliability of DHR (Decay Heat Rejection) systems for nuclear reactors can be predicted depends not only upon model representation but also on the accuracy of the data used. In the preliminary design stages when models are being used to arrive at major engineering decisions in relation to plant configuration, the best the designer can do is use the data available at the time. With the present state of the art it is acknowledged that some degree of judgement will have to be exercised particularly for plant involving sodium technology where a large amount of operational experience has not yet been generated. This paper reviews the current efforts being deployed in the acquisition of field data relevant to DHR systems so that improvements in reliability predictions may be realised

Systemic Modelling for Relating Labour Market to Vocational Education

Science.gov (United States)

Papakitsos, Evangelos C.

2016-01-01

The present study introduces a systemic model that demonstrates a description of the relationship between the labour-market and vocational education from the perspective of systemic theory. Based on the application of the relevant methodology, the two open social systems are identified and analyzed. Their key-features are presented and the points…

Isolated heart models: cardiovascular system studies and technological advances.

Science.gov (United States)

Olejnickova, Veronika; Novakova, Marie; Provaznik, Ivo

2015-07-01

Isolated heart model is a relevant tool for cardiovascular system studies. It represents a highly reproducible model for studying broad spectrum of biochemical, physiological, morphological, and pharmaceutical parameters, including analysis of intrinsic heart mechanics, metabolism, and coronary vascular response. Results obtained in this model are under no influence of other organ systems, plasma concentration of hormones or ions and influence of autonomic nervous system. The review describes various isolated heart models, the modes of heart perfusion, and advantages and limitations of various experimental setups. It reports the improvements of perfusion setup according to Langendorff introduced by the authors.

A multiple relevance feedback strategy with positive and negative models.

Directory of Open Access Journals (Sweden)

Yunlong Ma

Full Text Available A commonly used strategy to improve search accuracy is through feedback techniques. Most existing work on feedback relies on positive information, and has been extensively studied in information retrieval. However, when a query topic is difficult and the results from the first-pass retrieval are very poor, it is impossible to extract enough useful terms from a few positive documents. Therefore, the positive feedback strategy is incapable to improve retrieval in this situation. Contrarily, there is a relatively large number of negative documents in the top of the result list, and it has been confirmed that negative feedback strategy is an important and useful way for adapting this scenario by several recent studies. In this paper, we consider a scenario when the search results are so poor that there are at most three relevant documents in the top twenty documents. Then, we conduct a novel study of multiple strategies for relevance feedback using both positive and negative examples from the first-pass retrieval to improve retrieval accuracy for such difficult queries. Experimental results on these TREC collections show that the proposed language model based multiple model feedback method which is generally more effective than both the baseline method and the methods using only positive or negative model.

Pathohistological classification systems in gastric cancer: diagnostic relevance and prognostic value.

Science.gov (United States)

Berlth, Felix; Bollschweiler, Elfriede; Drebber, Uta; Hoelscher, Arnulf H; Moenig, Stefan

2014-05-21

Several pathohistological classification systems exist for the diagnosis of gastric cancer. Many studies have investigated the correlation between the pathohistological characteristics in gastric cancer and patient characteristics, disease specific criteria and overall outcome. It is still controversial as to which classification system imparts the most reliable information, and therefore, the choice of system may vary in clinical routine. In addition to the most common classification systems, such as the Laurén and the World Health Organization (WHO) classifications, other authors have tried to characterize and classify gastric cancer based on the microscopic morphology and in reference to the clinical outcome of the patients. In more than 50 years of systematic classification of the pathohistological characteristics of gastric cancer, there is no sole classification system that is consistently used worldwide in diagnostics and research. However, several national guidelines for the treatment of gastric cancer refer to the Laurén or the WHO classifications regarding therapeutic decision-making, which underlines the importance of a reliable classification system for gastric cancer. The latest results from gastric cancer studies indicate that it might be useful to integrate DNA- and RNA-based features of gastric cancer into the classification systems to establish prognostic relevance. This article reviews the diagnostic relevance and the prognostic value of different pathohistological classification systems in gastric cancer.

The relevance of non-human primate and rodent malaria models for humans

OpenAIRE

Langhorne, Jean; Buffet, Pierre; Galinski, Mary; Good, Michael; Harty, John; Leroy, Didier; Mota, Maria M; Pasini, Erica; Renia, Laurent; Riley, Eleanor; Stins, Monique; Duffy, Patrick

2011-01-01

Abstract At the 2010 Keystone Symposium on "Malaria: new approaches to understanding Host-Parasite interactions", an extra scientific session to discuss animal models in malaria research was convened at the request of participants. This was prompted by the concern of investigators that skepticism in the malaria community about the use and relevance of animal models, particularly rodent models of severe malaria, has impacted on funding decisions and publication of research using animal models....

Models for large superconducting toroidal magnet systems

International Nuclear Information System (INIS)

Arendt, F.; Brechna, H.; Erb, J.; Komarek, P.; Krauth, H.; Maurer, W.

1976-01-01

Prior to the design of large GJ toroidal magnet systems it is appropriate to procure small scale models, which can simulate their pertinent properties and allow to investigate their relevant phenomena. The important feature of the model is to show under which circumstances the system performance can be extrapolated to large magnets. Based on parameters such as the maximum magnetic field and the current density, the maximum tolerable magneto-mechanical stresses, a simple method of designing model magnets is presented. It is shown how pertinent design parameters are changed when the toroidal dimensions are altered. In addition some conductor cost estimations are given based on reactor power output and wall loading

Highly Relevant Mentoring (HRM) as a Faculty Development Model for Web-Based Instruction

Science.gov (United States)

Carter, Lorraine; Salyers, Vincent; Page, Aroha; Williams, Lynda; Albl, Liz; Hofsink, Clarence

2012-01-01

This paper describes a faculty development model called the highly relevant mentoring (HRM) model; the model includes a framework as well as some practical strategies for meeting the professional development needs of faculty who teach web-based courses. The paper further emphasizes the need for faculty and administrative buy-in for HRM and…

Structural equation modeling and natural systems

Science.gov (United States)

Grace, James B.

2006-01-01

This book, first published in 2006, presents an introduction to the methodology of structural equation modeling, illustrates its use, and goes on to argue that it has revolutionary implications for the study of natural systems. A major theme of this book is that we have, up to this point, attempted to study systems primarily using methods (such as the univariate model) that were designed only for considering individual processes. Understanding systems requires the capacity to examine simultaneous influences and responses. Structural equation modeling (SEM) has such capabilities. It also possesses many other traits that add strength to its utility as a means of making scientific progress. In light of the capabilities of SEM, it can be argued that much of ecological theory is currently locked in an immature state that impairs its relevance. It is further argued that the principles of SEM are capable of leading to the development and evaluation of multivariate theories of the sort vitally needed for the conservation of natural systems.

Health behavior change models and their socio-cultural relevance for breast cancer screening in African American women.

Science.gov (United States)

Ashing-Giwa, K

1999-01-01

Models of health behavior provide the conceptual bases for most of the breast cancer screening intervention studies. These models were not designed for and have not been adequately tested with African American women. The models discussed in this paper are: The Health Belief Model, the Theory of Reasoned Action/Theory of Planned Behavior, and the Transtheoretical Model. This paper will examine the socio-cultural relevance of these health behavior models, and discuss specific socio-cultural dimensions that are not accounted for by these paradigms. It is critical that researchers include socio-cultural dimensions, such as interconnectedness, health socialization, ecological factors and health care system factors into their intervention models with African American women. Comprehensive and socio-culturally based investigations are necessary to guide the scientific and policy challenge for reducing breast cancer mortality in African American women.

Mouse models of ageing and their relevance to disease.

Science.gov (United States)

Kõks, Sulev; Dogan, Soner; Tuna, Bilge Guvenc; González-Navarro, Herminia; Potter, Paul; Vandenbroucke, Roosmarijn E

2016-12-01

Ageing is a process that gradually increases the organism's vulnerability to death. It affects different biological pathways, and the underlying cellular mechanisms are complex. In view of the growing disease burden of ageing populations, increasing efforts are being invested in understanding the pathways and mechanisms of ageing. We review some mouse models commonly used in studies on ageing, highlight the advantages and disadvantages of the different strategies, and discuss their relevance to disease susceptibility. In addition to addressing the genetics and phenotypic analysis of mice, we discuss examples of models of delayed or accelerated ageing and their modulation by caloric restriction. Copyright © 2016 The Authors. Published by Elsevier Ireland Ltd.. All rights reserved.

Balancing relevance criteria through multi-objective optimization

NARCIS (Netherlands)

van Doorn, J.; Odijk, D.; Roijers, D.M.; de Rijke, M.

2016-01-01

Offline evaluation of information retrieval systems typically focuses on a single effectiveness measure that models the utility for a typical user. Such a measure usually combines a behavior-based rank discount with a notion of document utility that captures the single relevance criterion of

Perceived Relevance of an Introductory Information Systems Course to Prospective Business Students

Directory of Open Access Journals (Sweden)

Irene Govender

2013-12-01

Full Text Available The study is designed to examine students’ perceptions of the introductory Information Systems (IS course. It was an exploratory study in which 67 students participated. A quantitative approach was followed making use of questionnaires for the collection of data. Using the theory of reasoned action as a framework, the study explores the factors that influence non-IS major students’ perceived relevance of the IS introductory course. The analysis of collected data included descriptive and inferential statistics. Using multiple regression analysis, the results suggest that overall, the independent variables, relevance of the content, previous IT knowledge, relevance for professional practice, IT preference in courses and peers’ influence may account for 72% of the explanatory power for the dependent variable, perceived relevance of the IS course. In addition, the results have shown some strong predictors (IT preference and peers’ influence that influence students’ perceived relevance of the IS course. Practical work was found to be a strong mediating variable toward positive perceptions of IS. The results of this study suggest that students do indeed perceive the introductory IS course to be relevant and match their professional needs, but more practical work would enhance their learning. Implications for theory and practice are discussed as a result of the behavioural intention to perceive the IS course to be relevant and eventually to recruit more IS students.

Laboratory Modelling of Volcano Plumbing Systems: a review

Science.gov (United States)

Galland, Olivier; Holohan, Eoghan P.; van Wyk de Vries, Benjamin; Burchardt, Steffi

2015-04-01

Earth scientists have, since the XIX century, tried to replicate or model geological processes in controlled laboratory experiments. In particular, laboratory modelling has been used study the development of volcanic plumbing systems, which sets the stage for volcanic eruptions. Volcanic plumbing systems involve complex processes that act at length scales of microns to thousands of kilometres and at time scales from milliseconds to billions of years, and laboratory models appear very suitable to address them. This contribution reviews laboratory models dedicated to study the dynamics of volcano plumbing systems (Galland et al., Accepted). The foundation of laboratory models is the choice of relevant model materials, both for rock and magma. We outline a broad range of suitable model materials used in the literature. These materials exhibit very diverse rheological behaviours, so their careful choice is a crucial first step for the proper experiment design. The second step is model scaling, which successively calls upon: (1) the principle of dimensional analysis, and (2) the principle of similarity. The dimensional analysis aims to identify the dimensionless physical parameters that govern the underlying processes. The principle of similarity states that "a laboratory model is equivalent to his geological analogue if the dimensionless parameters identified in the dimensional analysis are identical, even if the values of the governing dimensional parameters differ greatly" (Barenblatt, 2003). The application of these two steps ensures a solid understanding and geological relevance of the laboratory models. In addition, this procedure shows that laboratory models are not designed to exactly mimic a given geological system, but to understand underlying generic processes, either individually or in combination, and to identify or demonstrate physical laws that govern these processes. From this perspective, we review the numerous applications of laboratory models to

Political economy models and agricultural policy formation : empirical applicability and relevance for the CAP

NARCIS (Netherlands)

Zee, van der F.A.

1997-01-01

This study explores the relevance and applicability of political economy models for the explanation of agricultural policies. Part I (chapters 4-7) takes a general perspective and evaluates the empirical applicability of voting models and interest group models to agricultural policy

Creation of reliable relevance judgments in information retrieval systems evaluation experimentation through crowdsourcing: a review.

Science.gov (United States)

Samimi, Parnia; Ravana, Sri Devi

2014-01-01

Test collection is used to evaluate the information retrieval systems in laboratory-based evaluation experimentation. In a classic setting, generating relevance judgments involves human assessors and is a costly and time consuming task. Researchers and practitioners are still being challenged in performing reliable and low-cost evaluation of retrieval systems. Crowdsourcing as a novel method of data acquisition is broadly used in many research fields. It has been proven that crowdsourcing is an inexpensive and quick solution as well as a reliable alternative for creating relevance judgments. One of the crowdsourcing applications in IR is to judge relevancy of query document pair. In order to have a successful crowdsourcing experiment, the relevance judgment tasks should be designed precisely to emphasize quality control. This paper is intended to explore different factors that have an influence on the accuracy of relevance judgments accomplished by workers and how to intensify the reliability of judgments in crowdsourcing experiment.

Discovering relevance knowledge in data: a growing cell structures approach.

Science.gov (United States)

Azuaje, F; Dubitzky, W; Black, N; Adamson, K

2000-01-01

Both information retrieval and case-based reasoning systems rely on effective and efficient selection of relevant data. Typically, relevance in such systems is approximated by similarity or indexing models. However, the definition of what makes data items similar or how they should be indexed is often nontrivial and time-consuming. Based on growing cell structure artificial neural networks, this paper presents a method that automatically constructs a case retrieval model from existing data. Within the case-based reasoning (CBR) framework, the method is evaluated for two medical prognosis tasks, namely, colorectal cancer survival and coronary heart disease risk prognosis. The results of the experiments suggest that the proposed method is effective and robust. To gain a deeper insight and understanding of the underlying mechanisms of the proposed model, a detailed empirical analysis of the models structural and behavioral properties is also provided.

A Model-Driven Visualization Tool for Use with Model-Based Systems Engineering Projects

Science.gov (United States)

Trase, Kathryn; Fink, Eric

2014-01-01

Model-Based Systems Engineering (MBSE) promotes increased consistency between a system's design and its design documentation through the use of an object-oriented system model. The creation of this system model facilitates data presentation by providing a mechanism from which information can be extracted by automated manipulation of model content. Existing MBSE tools enable model creation, but are often too complex for the unfamiliar model viewer to easily use. These tools do not yet provide many opportunities for easing into the development and use of a system model when system design documentation already exists. This study creates a Systems Modeling Language (SysML) Document Traceability Framework (SDTF) for integrating design documentation with a system model, and develops an Interactive Visualization Engine for SysML Tools (InVEST), that exports consistent, clear, and concise views of SysML model data. These exported views are each meaningful to a variety of project stakeholders with differing subjects of concern and depth of technical involvement. InVEST allows a model user to generate multiple views and reports from a MBSE model, including wiki pages and interactive visualizations of data. System data can also be filtered to present only the information relevant to the particular stakeholder, resulting in a view that is both consistent with the larger system model and other model views. Viewing the relationships between system artifacts and documentation, and filtering through data to see specialized views improves the value of the system as a whole, as data becomes information

Model-Based Systems Engineering in Concurrent Engineering Centers

Science.gov (United States)

Iwata, Curtis; Infeld, Samantha; Bracken, Jennifer Medlin; McGuire, Melissa; McQuirk, Christina; Kisdi, Aron; Murphy, Jonathan; Cole, Bjorn; Zarifian, Pezhman

2015-01-01

Concurrent Engineering Centers (CECs) are specialized facilities with a goal of generating and maturing engineering designs by enabling rapid design iterations. This is accomplished by co-locating a team of experts (either physically or virtually) in a room with a narrow design goal and a limited timeline of a week or less. The systems engineer uses a model of the system to capture the relevant interfaces and manage the overall architecture. A single model that integrates other design information and modeling allows the entire team to visualize the concurrent activity and identify conflicts more efficiently, potentially resulting in a systems model that will continue to be used throughout the project lifecycle. Performing systems engineering using such a system model is the definition of model-based systems engineering (MBSE); therefore, CECs evolving their approach to incorporate advances in MBSE are more successful in reducing time and cost needed to meet study goals. This paper surveys space mission CECs that are in the middle of this evolution, and the authors share their experiences in order to promote discussion within the community.

Dragon pulse information management system (DPIMS): A unique model-based approach to implementing domain agnostic system of systems and behaviors

Science.gov (United States)

Anderson, Thomas S.

2016-05-01

The Global Information Network Architecture is an information technology based on Vector Relational Data Modeling, a unique computational paradigm, DoD network certified by USARMY as the Dragon Pulse Informa- tion Management System. This network available modeling environment for modeling models, where models are configured using domain relevant semantics and use network available systems, sensors, databases and services as loosely coupled component objects and are executable applications. Solutions are based on mission tactics, techniques, and procedures and subject matter input. Three recent ARMY use cases are discussed a) ISR SoS. b) Modeling and simulation behavior validation. c) Networked digital library with behaviors.

Review of relevant studies of isolated systems[Integration of wind energy

Energy Technology Data Exchange (ETDEWEB)

Hansen, L.H.; Lundsager, P.

2000-12-01

The report presents the results of a review of studies relating to integration of wind energy in isolated power supply systems, based on a systematic literature survey. The purpose of the study is to develop a methodology consisting of a set of guidelines for wind energy projects in isolated energy systems and a set of tools and models that are operational on an engineering level. The review is based on a literature search in the ETDE Energy Database with a main search covering the period 7/88 to 6/97 and supplemented by partial update periods. A few newer references have been included in the review, most notably the IEC/PAS 62111 specification. The amount of wind energy literature related to the subject is excessively large, and a complete review in which every relevant abstract is identified and examined is not feasible within the framework of this (or probably any other) study. The review results have been organised according to the following keywords: methods & guides, economics, concept of application, system solutions, case studies, financial programmes, dedicated software tools. None of the found references presents methods or tools that contradict the philosophy of Risoe's methodology as it is described in the report. It is therefore concluded that Risoe's methodology makes a good platform for further development. (au)

Technology Investments in the NASA Entry Systems Modeling Project

Science.gov (United States)

Barnhardt, Michael; Wright, Michael; Hughes, Monica

2017-01-01

The Entry Systems Modeling (ESM) technology development project, initiated in 2012 under NASAs Game Changing Development (GCD) Program, is engaged in maturation of fundamental research developing aerosciences, materials, and integrated systems products for entry, descent, and landing(EDL)technologies [1]. To date, the ESM project has published over 200 papers in these areas, comprising the bulk of NASAs research program for EDL modeling. This presentation will provide an overview of the projects successes and challenges, and an assessment of future investments in EDL modeling and simulation relevant to NASAs mission

A review of models relevant to road safety.

Science.gov (United States)

Hughes, B P; Newstead, S; Anund, A; Shu, C C; Falkmer, T

2015-01-01

It is estimated that more than 1.2 million people die worldwide as a result of road traffic crashes and some 50 million are injured per annum. At present some Western countries' road safety strategies and countermeasures claim to have developed into 'Safe Systems' models to address the effects of road related crashes. Well-constructed models encourage effective strategies to improve road safety. This review aimed to identify and summarise concise descriptions, or 'models' of safety. The review covers information from a wide variety of fields and contexts including transport, occupational safety, food industry, education, construction and health. The information from 2620 candidate references were selected and summarised in 121 examples of different types of model and contents. The language of safety models and systems was found to be inconsistent. Each model provided additional information regarding style, purpose, complexity and diversity. In total, seven types of models were identified. The categorisation of models was done on a high level with a variation of details in each group and without a complete, simple and rational description. The models identified in this review are likely to be adaptable to road safety and some of them have previously been used. None of systems theory, safety management systems, the risk management approach, or safety culture was commonly or thoroughly applied to road safety. It is concluded that these approaches have the potential to reduce road trauma. Copyright © 2014 Elsevier Ltd. All rights reserved.

Canine intrahepatic vasculature: is a functional anatomic model relevant to the dog?

Science.gov (United States)

Hall, Jon L; Mannion, Paddy; Ladlow, Jane F

2015-01-01

To clarify canine intrahepatic portal and hepatic venous system anatomy using corrosion casting and advanced imaging and to devise a novel functional anatomic model of the canine liver to investigate whether this could help guide the planning and surgical procedure of partial hepatic lobectomy and interventional radiological procedures. Prospective experimental study. Adult Greyhound cadavers (n = 8). Portal and hepatic vein corrosion casts of healthy livers were assessed using computed tomography (CT). The hepatic lobes have a consistent hilar hepatic and portal vein supply with some variation in the number of intrahepatic branches. For all specimens, 3 surgically resectable areas were identified in the left lateral lobe and 2 surgically resectable areas were identified in the right medial lobe as defined by a functional anatomic model. CT of detailed acrylic casts allowed complex intrahepatic vascular relationships to be investigated and compared with previous studies. Improving understanding of the intrahepatic vascular supply facilitates interpretation of advanced images in clinical patients, the planning and performance of surgical procedures, and may facilitate interventional vascular procedures, such as intravenous embolization of portosystemic shunts. Functional division of the canine liver similar to human models is possible. The left lateral and right medial lobes can be consistently divided into surgically resectable functional areas and partial lobectomies can be performed following a functional model; further study in clinically affected animals would be required to investigate the relevance of this functional model in the dog. © Copyright 2014 by The American College of Veterinary Surgeons.

On the hyperporous non-linear elasticity model for fusion-relevant pebble beds

International Nuclear Information System (INIS)

Di Maio, P.A.; Giammusso, R.; Vella, G.

2010-01-01

Packed pebble beds are particular granular systems composed of a large amount of small particles, arranged in irregular lattices and surrounded by a gas filling interstitial spaces. Due to their heterogeneous structure, pebble beds have non-linear and strongly coupled thermal and mechanical behaviours whose constitutive models seem limited, being not suitable for fusion-relevant design-oriented applications. Within the framework of the modelling activities promoted for the lithiated ceramics and beryllium pebble beds foreseen in the Helium-Cooled Pebble Bed breeding blanket concept of DEMO, at the Department of Nuclear Engineering of the University of Palermo (DIN) a thermo-mechanical constitutive model has been set-up assuming that pebble beds can be considered as continuous, homogeneous and isotropic media. The present paper deals with the DIN non-linear elasticity constitutive model, based on the assumption that during the reversible straining of a pebble bed its effective logarithmic bulk modulus depends on the equivalent pressure according to a modified power law and its effective Poisson modulus remains constant. In these hypotheses the functional dependence of the effective tangential and secant bed deformation moduli on either the equivalent pressure or the volumetric strain have been derived in a closed analytical form. A procedure has been, then, defined to assess the model parameters for a given pebble bed from its oedometric test results and it has been applied to both polydisperse lithium orthosilicate and single size beryllium pebble beds.

A Method for The Assessing of Reliability Characteristics Relevant to an Assumed Position-Fixing Accuracy in Navigational Positioning Systems

Directory of Open Access Journals (Sweden)

Specht Cezary

2016-09-01

Full Text Available This paper presents a method which makes it possible to determine reliability characteristics of navigational positioning systems, relevant to an assumed value of permissible error in position fixing. The method allows to calculate: availability , reliability as well as operation continuity of position fixing system for an assumed, determined on the basis of formal requirements - both worldwide and national, position-fixing accuracy. The proposed mathematical model allows to satisfy, by any navigational positioning system, not only requirements as to position-fixing accuracy of a given navigational application (for air , sea or land traffic but also the remaining characteristics associated with technical serviceability of a system.

Modeling the performance of low concentration photovoltaic systems

Energy Technology Data Exchange (ETDEWEB)

Reis, F. [SESUL, Faculdade de Ciencias da Universidade de Lisboa, 1749-016 Lisboa (Portugal); WS Energia, Ed. Tecnologia II 47, Taguspark, Oeiras (Portugal); Brito, M.C. [SESUL, Faculdade de Ciencias da Universidade de Lisboa, 1749-016 Lisboa (Portugal); Corregidor, V.; Wemans, J. [WS Energia, Ed. Tecnologia II 47, Taguspark, Oeiras (Portugal); Sorasio, G. [WS Energia, Ed. Tecnologia II 47, Taguspark, Oeiras (Portugal); Centro Richerche ISCAT, VS Pellico, 12037, Saluzzo (Italy)

2010-07-15

A theoretical model has been developed to describe the response of V-trough systems in terms of module temperature, power output and energy yield using as inputs the atmospheric conditions. The model was adjusted to DoubleSun {sup registered} concentration technology, which integrates dual-axis tracker and conventional mono-crystalline Si modules. The good agreement between model predictions and the results obtained at WS Energia laboratory, Portugal, validated the model. It is shown that DoubleSun {sup registered} technology increases up to 86% the yearly energy yield of conventional modules relative to a fixed flat-plate system. The model was also used to perform a sensitivity analysis, in order to highlight the relevance of the leading working parameters (such as irradiance) in system performance (energy yield and module temperature). Model results show that the operation module temperature is always below the maximum working temperature defined by the module manufacturers. (author)

Studies of Catalytic Model Systems

DEFF Research Database (Denmark)

Holse, Christian

The overall topic of this thesis is within the field of catalysis, were model systems of different complexity have been studied utilizing a multipurpose Ultra High Vacuum chamber (UHV). The thesis falls in two different parts. First a simple model system in the form of a ruthenium single crystal...... of the Cu/ZnO nanoparticles is highly relevant to industrial methanol synthesis for which the direct interaction of Cu and ZnO nanocrystals synergistically boost the catalytic activity. The dynamical behavior of the nanoparticles under reducing and oxidizing environments were studied by means of ex situ X......-ray Photoelectron Electron Spectroscopy (XPS) and in situ Transmission Electron Microscopy (TEM). The surface composition of the nanoparticles changes reversibly as the nanoparticles exposed to cycles of high-pressure oxidation and reduction (200 mbar). Furthermore, the presence of metallic Zn is observed by XPS...

Identifying optimal models to represent biochemical systems.

Directory of Open Access Journals (Sweden)

Mochamad Apri

Full Text Available Biochemical systems involving a high number of components with intricate interactions often lead to complex models containing a large number of parameters. Although a large model could describe in detail the mechanisms that underlie the system, its very large size may hinder us in understanding the key elements of the system. Also in terms of parameter identification, large models are often problematic. Therefore, a reduced model may be preferred to represent the system. Yet, in order to efficaciously replace the large model, the reduced model should have the same ability as the large model to produce reliable predictions for a broad set of testable experimental conditions. We present a novel method to extract an "optimal" reduced model from a large model to represent biochemical systems by combining a reduction method and a model discrimination method. The former assures that the reduced model contains only those components that are important to produce the dynamics observed in given experiments, whereas the latter ensures that the reduced model gives a good prediction for any feasible experimental conditions that are relevant to answer questions at hand. These two techniques are applied iteratively. The method reveals the biological core of a model mathematically, indicating the processes that are likely to be responsible for certain behavior. We demonstrate the algorithm on two realistic model examples. We show that in both cases the core is substantially smaller than the full model.

Improving Industry-Relevant Nuclear-Knowledge Development through Special Partnerships

International Nuclear Information System (INIS)

Cilliers, A.

2016-01-01

Full text: South African Network for Nuclear Education Science and Technology (SAN NEST) has the objective to develop the nuclear education system in South Africa to a point where suitably qualified and experienced nuclear personnel employed by nuclear science and technology programmes in South Africa are predominantly produced by the South African education system. This is done to strengthen the nuclear science and technology education programmes to better meet future demands in terms of quality, capacity and relevance. To ensure sustainable relevance, it is important to develop special partnerships with industry. This paper describes unique partnerships that were developed with nuclear industry partners. The success of these partnerships has ensured more industry partners to embrace the model which has proven to develop relevant knowledge, support research and provide innovative solutions for industry. (author

Mitochondrial metabolism in early neural fate and its relevance for neuronal disease modeling.

Science.gov (United States)

Lorenz, Carmen; Prigione, Alessandro

2017-12-01

Modulation of energy metabolism is emerging as a key aspect associated with cell fate transition. The establishment of a correct metabolic program is particularly relevant for neural cells given their high bioenergetic requirements. Accordingly, diseases of the nervous system commonly involve mitochondrial impairment. Recent studies in animals and in neural derivatives of human pluripotent stem cells (PSCs) highlighted the importance of mitochondrial metabolism for neural fate decisions in health and disease. The mitochondria-based metabolic program of early neurogenesis suggests that PSC-derived neural stem cells (NSCs) may be used for modeling neurological disorders. Understanding how metabolic programming is orchestrated during neural commitment may provide important information for the development of therapies against conditions affecting neural functions, including aging and mitochondrial disorders. Copyright © 2017. Published by Elsevier Ltd.

Equation of state experiments and theory relevant to planetary modelling

International Nuclear Information System (INIS)

Ross, M.; Graboske, H.C. Jr.; Nellis, W.J.

1981-01-01

In recent years there have been a number of static and shockwave experiments on the properties of planetary materials. The highest pressure measurements, and the ones most relevant to planetary modelling, have been obtained by shock compression. Of particular interest to the Jovian group are results for H 2 , H 2 O, CH 4 and NH 3 . Although the properties of metallic hydrogen have not been measured, they have been the subject of extensive calculations. In addition recent shock wave experiments on iron report to have detected melting under Earth core conditions. From this data theoretical models have been developed for computing the equations of state of materials used in planetary studies. A compelling feature that has followed from the use of improved material properties is a simplification in the planetary models. (author)

Flexible AC transmission systems. Modelling and control

Energy Technology Data Exchange (ETDEWEB)

Zhang, Xiao-Ping [Birmingham Univ. (United Kingdom); Rehtanz, Christian [Technische Univ. Dortmund (Germany); Pal, Bikash [Imperial College, London (United Kingdom)

2012-11-01

This monograph presents advanced modelling, analysis and control techniques of FACTS. These topics reflect the recent research and development of FACTS controllers, and anticipate the future applications of FACTS in power systems. The book covers comprehensively a range of power-system control problems: from steady-state voltage and power flow control, to voltage and reactive power control, to voltage stability control, to small signal stability control using FACTS controllers. The book presents the modelling of the latest FACTS controllers for power flow control, compensation and power quality (IPFC, GUPF, VSC HVDC and M-VSCHVDC, etc.) in power system analysis. The selection is evaluated by the actual and likely future practical relevance of each. The material is derived mainly from the research and industrial development in which the authors have been heavily involved. The book is timely and of great value to power engineering engineers and students of modelling, simulations and control design of FACTS for a broad practical range of power system operation, planning and control problems.

THE RELEVANCE OF GOODWILL REPORTING IN AN ISLAMIC CONTEXT

Directory of Open Access Journals (Sweden)

Radu-Daniel LOGHIN

2014-11-01

Full Text Available In recent years global finance has seen the emergence of Islamic finance as an alternative to the western secular system. While the two systems posses largely similar concepts of social equity and well-being the major divide between them rests in the distinction between divine and natural law as a source of protection for the downtrodden. As communication barriers between the Arabic and Anglo-European accounting systems start to blur, the question posed for the practitioners as to what constitutes a source of equity becomes more and more relevant. Considering the case of Islamic countries, besides internally-generated and acquired goodwill Islamic sources of social equity such as zakat also provide a source of social equity. For the purpose of this paper, two models pertaining to value relevance are tested for a sample of 56 companies in 6 accounting jurisdictions with the purpose of identifying the underlying sources of social equity revealing that zakat disclosures marginally improve the accuracy of the model.

Relevant Criteria for Testing the Quality of Models for Turbulent Wind Speed Fluctuations

DEFF Research Database (Denmark)

Frandsen, Sten Tronæs; Ejsing Jørgensen, Hans; Sørensen, John Dalsgaard

2008-01-01

Seeking relevant criteria for testing the quality of turbulence models, the scale of turbulence and the gust factor have been estimated from data and compared with predictions from first-order models of these two quantities. It is found that the mean of the measured length scales is approximately...... 10% smaller than the IEC model for wind turbine hub height levels. The mean is only marginally dependent on trends in time series. It is also found that the coefficient of variation of the measured length scales is about 50%. 3  s and 10  s preaveraging of wind speed data are relevant for megawatt......-size wind turbines when seeking wind characteristics that correspond to one blade and the entire rotor, respectively. For heights exceeding 50-60  m, the gust factor increases with wind speed. For heights larger than 60-80  m, present assumptions on the value of the gust factor are significantly...

Enhancement of Physics-of-Failure Prognostic Models with System Level Features

National Research Council Canada - National Science Library

Kacprzynski, Gregory

2002-01-01

.... The novelty in the current prognostic tool development is that predictions are made through the fusion of stochastic physics-of-failure models, relevant system or component level health monitoring...

Developments in entanglement theory and applications to relevant physical systems

OpenAIRE

Lamata Manuel, Lucas

2007-01-01

This Thesis is devoted to the analysis of entanglement in relevant physical systems. Entanglement is the conducting theme of this research, though I do not dedicate to a single topic, but consider a wide scope of physical situations. I have followed mainly three lines of research for this Thesis, with a series of different works each, which are, Entanglement and Relativistic Quantum Theory, Continuous-variable entanglement, and Multipartite entanglement.

Modulation of the mirror system by social relevance.

Science.gov (United States)

Kilner, James M; Marchant, Jennifer L; Frith, Chris D

2006-09-01

When we observe the actions of others, certain areas of the brain are activated in a similar manner as to when we perform the same actions ourselves. This 'mirror system' includes areas in the ventral premotor cortex and the inferior parietal lobule. Experimental studies suggest that action observation automatically elicits activity in the observer, which precisely mirrors the activity observed. In this case we would expect this activity to be independent of observer's viewpoint. Here we use whole-head magnetoencephalography (MEG) to record cortical activity of human subjects whilst they watched a series of videos of an actor making a movement recorded from different viewpoints. We show that one cortical response to action observation (oscillatory activity in the 7-12 Hz frequency range) is modulated by the relationship between the observer and the actor. We suggest that this modulation reflects a mechanism that filters information into the 'mirror system', allowing only socially relevant information to pass.

Current systematic carbon-cycle observations and the need for implementing a policy-relevant carbon observing system

International Nuclear Information System (INIS)

Ciais, P.; Peregon, A.; Chevallier, F.; Bopp, L.; Breon, F.M.; Broquet, G.; Luyssaert, S.; Moulin, C.; Paris, J.D.; Poulter, B.; Rivier, L.; Wang, R.

2014-01-01

A globally integrated carbon observation and analysis system is needed to improve the fundamental understanding of the global carbon cycle, to improve our ability to project future changes, and to verify the effectiveness of policies aiming to reduce greenhouse gas emissions and increase carbon sequestration. Building an integrated carbon observation system requires transformational advances from the existing sparse, exploratory framework towards a dense, robust, and sustained system in all components: anthropogenic emissions, the atmosphere, the ocean, and the terrestrial biosphere. The paper is addressed to scientists, policy makers, and funding agencies who need to have a global picture of the current state of the (diverse) carbon observations. We identify the current state of carbon observations, and the needs and notional requirements for a global integrated carbon observation system that can be built in the next decade. A key conclusion is the substantial expansion of the ground-based observation networks required to reach the high spatial resolution for CO 2 and CH 4 fluxes, and for carbon stocks for addressing policy-relevant objectives, and attributing flux changes to underlying processes in each region. In order to establish flux and stock diagnostics over areas such as the southern oceans, tropical forests, and the Arctic, in situ observations will have to be complemented with remote-sensing measurements. Remote sensing offers the advantage of dense spatial coverage and frequent revisit. A key challenge is to bring remote-sensing measurements to a level of long-term consistency and accuracy so that they can be efficiently combined in models to reduce uncertainties, in synergy with ground based data. Bringing tight observational constraints on fossil fuel and land use change emissions will be the biggest challenge for deployment of a policy-relevant integrated carbon observation system. This will require in situ and remotely sensed data at much higher

Comments On Clock Models In Hybrid Automata And Hybrid Control Systems

Directory of Open Access Journals (Sweden)

Virginia Ecaterina OLTEAN

2001-12-01

Full Text Available Hybrid systems have received a lot of attention in the past decade and a number of different models have been proposed in order to establish mathematical framework that is able to handle both continuous and discrete aspects. This contribution is focused on two models: hybrid automata and hybrid control systems with continuous-discrete interface and the importance of clock models is emphasized. Simple and relevant examples, some taken from the literature, accompany the presentation.

Animal models of Central Diabetes Insipidus: Human relevance of acquired beyond hereditary syndromes and the role of oxytocin.

Science.gov (United States)

Bernal, Antonio; Mahía, Javier; Puerto, Amadeo

2016-07-01

The aim of this study was to review different animal models of Central Diabetes Insipidus, a neurobiological syndrome characterized by the excretion of copious amounts of diluted urine (polyuria), a consequent water intake (polydipsia), and a rise in the serum sodium concentration (hypernatremia). In rodents, Central Diabetes Insipidus can be caused by genetic disorders (Brattleboro rats) but also by various traumatic/surgical interventions, including neurohypophysectomy, pituitary stalk compression, hypophysectomy, and median eminence lesions. Regardless of its etiology, Central Diabetes Insipidus affects the neuroendocrine system that secretes arginine vasopressin, a neurohormone responsible for antidiuretic functions that acts trough the renal system. However, most Central Diabetes Insipidus models also show disorders in other neurobiological systems, specifically in the secretion of oxytocin, a neurohormone involved in body sodium excretion. Although the hydromineral behaviors shown by the different Central Diabetes Insipidus models have usually been considered as very similar, the present review highlights relevant differences with respect to these behaviors as a function of the individual neurobiological systems affected. Increased understanding of the relationship between the neuroendocrine systems involved and the associated hydromineral behaviors may allow appropriate action to be taken to correct these behavioral neuroendocrine deficits. Copyright © 2016 Elsevier Ltd. All rights reserved.

Hierarchical Bayesian nonparametric mixture models for clustering with variable relevance determination.

Science.gov (United States)

Yau, Christopher; Holmes, Chris

2011-07-01

We propose a hierarchical Bayesian nonparametric mixture model for clustering when some of the covariates are assumed to be of varying relevance to the clustering problem. This can be thought of as an issue in variable selection for unsupervised learning. We demonstrate that by defining a hierarchical population based nonparametric prior on the cluster locations scaled by the inverse covariance matrices of the likelihood we arrive at a 'sparsity prior' representation which admits a conditionally conjugate prior. This allows us to perform full Gibbs sampling to obtain posterior distributions over parameters of interest including an explicit measure of each covariate's relevance and a distribution over the number of potential clusters present in the data. This also allows for individual cluster specific variable selection. We demonstrate improved inference on a number of canonical problems.

Theories, models and frameworks used in capacity building interventions relevant to public health: a systematic review.

Science.gov (United States)

Bergeron, Kim; Abdi, Samiya; DeCorby, Kara; Mensah, Gloria; Rempel, Benjamin; Manson, Heather

2017-11-28

There is limited research on capacity building interventions that include theoretical foundations. The purpose of this systematic review is to identify underlying theories, models and frameworks used to support capacity building interventions relevant to public health practice. The aim is to inform and improve capacity building practices and services offered by public health organizations. Four search strategies were used: 1) electronic database searching; 2) reference lists of included papers; 3) key informant consultation; and 4) grey literature searching. Inclusion and exclusion criteria are outlined with included papers focusing on capacity building, learning plans, professional development plans in combination with tools, resources, processes, procedures, steps, model, framework, guideline, described in a public health or healthcare setting, or non-government, government, or community organizations as they relate to healthcare, and explicitly or implicitly mention a theory, model and/or framework that grounds the type of capacity building approach developed. Quality assessment were performed on all included articles. Data analysis included a process for synthesizing, analyzing and presenting descriptive summaries, categorizing theoretical foundations according to which theory, model and/or framework was used and whether or not the theory, model or framework was implied or explicitly identified. Nineteen articles were included in this review. A total of 28 theories, models and frameworks were identified. Of this number, two theories (Diffusion of Innovations and Transformational Learning), two models (Ecological and Interactive Systems Framework for Dissemination and Implementation) and one framework (Bloom's Taxonomy of Learning) were identified as the most frequently cited. This review identifies specific theories, models and frameworks to support capacity building interventions relevant to public health organizations. It provides public health practitioners

National critical incident reporting systems relevant to anaesthesia: a European survey.

Science.gov (United States)

Reed, S; Arnal, D; Frank, O; Gomez-Arnau, J I; Hansen, J; Lester, O; Mikkelsen, K L; Rhaiem, T; Rosenberg, P H; St Pierre, M; Schleppers, A; Staender, S; Smith, A F

2014-03-01

Critical incident reporting is a key tool in the promotion of patient safety in anaesthesia. We surveyed representatives of national incident reporting systems in six European countries, inviting information on scope and organization, and intelligence on factors determining success and failure. Some systems are government-run and nationally conceived; others started out as small, specialty-focused initiatives, which have since acquired a national reach. However, both national co-ordination and specialty enthusiasts seem to be necessary for an optimally functioning system. The role of reporting culture, definitional issues, and dissemination is discussed. We make recommendations for others intending to start new systems and speculate on the prospects for sharing patient safety lessons relevant to anaesthesia at European level.

Seeking kinetic pathways relevant to the structural evolution of metal nanoparticles

International Nuclear Information System (INIS)

Haldar, Paramita; Chatterjee, Abhijit

2015-01-01

Understanding the kinetic pathways that cause metal nanoparticles to structurally evolve over time is essential for predicting their shape and size distributions and catalytic properties. Consequently, we need detailed kinetic models that can provide such information. Most kinetic Monte Carlo models used for metal systems contain a fixed catalogue of atomic moves; the catalogue is largely constructed based on our physical understanding of the material. In some situations, it is possible that an incorrect picture of the overall dynamics is obtained when kinetic pathways that are relevant to the dynamics are missing from the catalogue. Hence, a computational framework that can systematically determine the relevant pathways is required. This work intends to fulfil this requirement. Examples involving an Ag nanoparticle are studied to illustrate how molecular dynamics (MD) calculations can be employed to find the relevant pathways in a system. Since pathways that are unlikely to be selected at short timescales can become relevant at longer times, the accuracy of the catalogue is maintained by continually seeking these pathways using MD. We discuss various aspects of our approach, namely, defining the relevance of atomic moves to the dynamics and determining when additional MD is required to ensure the desired accuracy, as well as physical insights into the Ag nanoparticle. (paper)

Political economy models and agricultural policy formation : empirical applicability and relevance for the CAP

OpenAIRE

Zee, van der, F.A.

1997-01-01

This study explores the relevance and applicability of political economy models for the explanation of agricultural policies. Part I (chapters 4-7) takes a general perspective and evaluates the empirical applicability of voting models and interest group models to agricultural policy formation in industrialised market economics. Part II (chapters 8-11) focuses on the empirical applicability of political economy models to agricultural policy formation and agricultural policy developmen...

Failure Propagation Modeling and Analysis via System Interfaces

Directory of Open Access Journals (Sweden)

Lin Zhao

2016-01-01

Full Text Available Safety-critical systems must be shown to be acceptably safe to deploy and use in their operational environment. One of the key concerns of developing safety-critical systems is to understand how the system behaves in the presence of failures, regardless of whether that failure is triggered by the external environment or caused by internal errors. Safety assessment at the early stages of system development involves analysis of potential failures and their consequences. Increasingly, for complex systems, model-based safety assessment is becoming more widely used. In this paper we propose an approach for safety analysis based on system interface models. By extending interaction models on the system interface level with failure modes as well as relevant portions of the physical system to be controlled, automated support could be provided for much of the failure analysis. We focus on fault modeling and on how to compute minimal cut sets. Particularly, we explore state space reconstruction strategy and bounded searching technique to reduce the number of states that need to be analyzed, which remarkably improves the efficiency of cut sets searching algorithm.

Using language models to identify relevant new information in inpatient clinical notes.

Science.gov (United States)

Zhang, Rui; Pakhomov, Serguei V; Lee, Janet T; Melton, Genevieve B

2014-01-01

Redundant information in clinical notes within electronic health record (EHR) systems is ubiquitous and may negatively impact the use of these notes by clinicians, and, potentially, the efficiency of patient care delivery. Automated methods to identify redundant versus relevant new information may provide a valuable tool for clinicians to better synthesize patient information and navigate to clinically important details. In this study, we investigated the use of language models for identification of new information in inpatient notes, and evaluated our methods using expert-derived reference standards. The best method achieved precision of 0.743, recall of 0.832 and F1-measure of 0.784. The average proportion of redundant information was similar between inpatient and outpatient progress notes (76.6% (SD=17.3%) and 76.7% (SD=14.0%), respectively). Advanced practice providers tended to have higher rates of redundancy in their notes compared to physicians. Future investigation includes the addition of semantic components and visualization of new information.

A Ship Propulsion System Model for Fault-tolerant Control

DEFF Research Database (Denmark)

Izadi-Zamanabadi, Roozbeh; Blanke, M.

This report presents a propulsion system model for a low speed marine vehicle, which can be used as a test benchmark for Fault-Tolerant Control purposes. The benchmark serves the purpose of offering realistic and challenging problems relevant in both FDI and (autonomous) supervisory control area...

Culturally relevant model program to prevent and reduce agricultural injuries.

Science.gov (United States)

Helitzer, D L; Hathorn, G; Benally, J; Ortega, C

2014-07-01

Limited research has explored pesticide injury prevention among American Indian farmers. In a five-year agricultural intervention, a university-community partnership, including the University of New Mexico School of Medicine, New Mexico State University, Shiprock Area Cooperative Extension Service, and Navajo Nation communities, used a culturally relevant model to introduce and maintain safe use of integrated pest management techniques. We applied the Diffusion of Innovations theory and community-based approaches to tailor health promotion strategies for our intervention. In a longitudinal study with repeated measures, we trained six "model farmers" to be crop management experts in pesticide safety, application, and control. Subsequently, these model farmers worked with 120 farm families randomized into two groups: intervention (Group 1) and delayed intervention (Group 2). Measurements included a walk-through analysis, test of knowledge and attitudes, and yield analysis. Both groups demonstrated improvements in pesticide storage behaviors after training. Test scores regarding safety practices improved significantly: from 57.3 to 72.4 for Group 1 and from 52.6 to 76.3 for Group 2. Group 1 maintained their knowledge and safety practices after the intervention. Attitudes about pesticides and communication of viewpoints changed across the study years. With pesticides and fertilizer, the number of corn ears increased by 56.3% and yield (kg m(-2)) of alfalfa increased by 41.2%. The study combined traditional farming practices with culturally relevant approaches and behavior change theory to affect knowledge, safety practices, attitudes, communication channels, and crop yield. Storage behaviors, use of pesticides and safety and application equipment, and safety practice knowledge changed significantly, as did attitudes about social networking, social support, and the compatibility and relative advantage of pesticides for farms.

Holistic energy system modeling combining multi-objective optimization and life cycle assessment

Science.gov (United States)

Rauner, Sebastian; Budzinski, Maik

2017-12-01

Making the global energy system more sustainable has emerged as a major societal concern and policy objective. This transition comes with various challenges and opportunities for a sustainable evolution affecting most of the UN’s Sustainable Development Goals. We therefore propose broadening the current metrics for sustainability in the energy system modeling field by using industrial ecology techniques to account for a conclusive set of indicators. This is pursued by including a life cycle based sustainability assessment into an energy system model considering all relevant products and processes of the global supply chain. We identify three pronounced features: (i) the low-hanging fruit of impact mitigation requiring manageable economic effort; (ii) embodied emissions of renewables cause increasing spatial redistribution of impact from direct emissions, the place of burning fuel, to indirect emissions, the location of the energy infrastructure production; (iii) certain impact categories, in which more overall sustainable systems perform worse than the cost minimal system, require a closer look. In essence, this study makes the case for future energy system modeling to include the increasingly important global supply chain and broaden the metrics of sustainability further than cost and climate change relevant emissions.

The LAILAPS Search Engine: Relevance Ranking in Life Science Databases

Directory of Open Access Journals (Sweden)

Lange Matthias

2010-06-01

Full Text Available Search engines and retrieval systems are popular tools at a life science desktop. The manual inspection of hundreds of database entries, that reflect a life science concept or fact, is a time intensive daily work. Hereby, not the number of query results matters, but the relevance does. In this paper, we present the LAILAPS search engine for life science databases. The concept is to combine a novel feature model for relevance ranking, a machine learning approach to model user relevance profiles, ranking improvement by user feedback tracking and an intuitive and slim web user interface, that estimates relevance rank by tracking user interactions. Queries are formulated as simple keyword lists and will be expanded by synonyms. Supporting a flexible text index and a simple data import format, LAILAPS can easily be used both as search engine for comprehensive integrated life science databases and for small in-house project databases.

On the relevance of spectral features for instrument classification

DEFF Research Database (Denmark)

Nielsen, Andreas Brinch; Sigurdsson, Sigurdur; Hansen, Lars Kai

2007-01-01

Automatic knowledge extraction from music signals is a key component for most music organization and music information retrieval systems. In this paper, we consider the problem of instrument modelling and instrument classification from the rough audio data. Existing systems for automatic instrument...... classification operate normally on a relatively large number of features, from which those related to the spectrum of the audio signal are particularly relevant. In this paper, we confront two different models about the spectral characterization of musical instruments. The first assumes a constant envelope...

The relevance of existing health communication models in the email age: An

Science.gov (United States)

Fage-Butler, Antoinette Mary; Jensen, Matilde Nisbeth

2015-01-01

Email communication is being integrated relatively slowly into doctor–patient communication. Patients have expressed enthusiasm for the medium, while doctors are generally more reluctant. As existing health communication models have characteristically assumed the co-presence of doctor and patient and primarily reflect medical practitioners’ perspectives, their suitability in relation to email communication and patients’ perspectives warrants further investigation. Following a two-step process and using the methodology of the integrative literature review, 29 articles from 2004–2014 are analysed with the aim of investigating the advantages and disadvantages of the medium of email from the patient’s perspective. The findings are compared to the health communication models of biomedicine, patient-centeredness, patient education and patient empowerment to investigate these models’ relevance for doctor–patient email communication. Results show that patients identify numerous advantages with email communication, including improved convenience and access, more detailed informational exchanges, greater reflection opportunities, freedom from the medical gaze and the potential to level out power imbalances, as well as a number of primarily medium-related disadvantages. The findings indicate that email can counteract some of the communicative problems associated with biomedicine and suggest the ongoing relevance of aspects of the models of patient empowerment, patient-centeredness and patient education for email communication.

Neural systems supporting and affecting economically relevant behavior

Directory of Open Access Journals (Sweden)

Braeutigam S

2012-05-01

Full Text Available Sven BraeutigamOxford Centre for Human Brain Activity, University of Oxford, Oxford, United KingdomAbstract: For about a hundred years, theorists and traders alike have tried to unravel and understand the mechanisms and hidden rules underlying and perhaps determining economically relevant behavior. This review focuses on recent developments in neuroeconomics, where the emphasis is placed on two directions of research: first, research exploiting common experiences of urban inhabitants in industrialized societies to provide experimental paradigms with a broader real-life content; second, research based on behavioral genetics, which provides an additional dimension for experimental control and manipulation. In addition, possible limitations of state-of-the-art neuroeconomics research are addressed. It is argued that observations of neuronal systems involved in economic behavior converge to some extent across the technologies and paradigms used. Conceptually, the data available as of today raise the possibility that neuroeconomic research might provide evidence at the neuronal level for the existence of multiple systems of thought and for the importance of conflict. Methodologically, Bayesian approaches in particular may play an important role in identifying mechanisms and establishing causality between patterns of neural activity and economic behavior.Keywords: neuroeconomics, behavioral genetics, decision-making, consumer behavior, neural system

A Dynamic Wind Generation Model for Power Systems Studies

OpenAIRE

Estanqueiro, Ana

2007-01-01

In this paper, a wind park dynamic model is presented together with a base methodology for its application to power system studies. This detailed wind generation model addresses the wind turbine components and phenomena more relevant to characterize the power quality of a grid connected wind park, as well as the wind park response to the grid fast perturbations, e.g., low voltage ride through fault. The developed model was applied to the operating conditions of the selected sets of wind turbi...

Family influences on mania-relevant cognitions and beliefs: a cognitive model of mania and reward.

Science.gov (United States)

Chen, Stephen H; Johnson, Sheri L

2012-07-01

The present study proposed and tested a cognitive model of mania and reward. Undergraduates (N = 284; 68.4% female; mean age = 20.99 years, standard deviation ± 3.37) completed measures of family goal setting and achievement values, personal reward-related beliefs, cognitive symptoms of mania, and risk for mania. Correlational analyses and structural equation modeling supported two distinct, but related facets of mania-relevant cognition: stably present reward-related beliefs and state-dependent cognitive symptoms in response to success and positive emotion. Results also indicated that family emphasis on achievement and highly ambitious extrinsic goals were associated with these mania-relevant cognitions. Finally, controlling for other factors, cognitive symptoms in response to success and positive emotion were uniquely associated with lifetime propensity towards mania symptoms. Results support the merit of distinguishing between facets of mania-relevant cognition and the importance of the family in shaping both aspects of cognition. © 2012 Wiley Periodicals, Inc.

Mathematical Models and Methods for Living Systems

CERN Document Server

Chaplain, Mark; Pugliese, Andrea

2016-01-01

The aim of these lecture notes is to give an introduction to several mathematical models and methods that can be used to describe the behaviour of living systems. This emerging field of application intrinsically requires the handling of phenomena occurring at different spatial scales and hence the use of multiscale methods. Modelling and simulating the mechanisms that cells use to move, self-organise and develop in tissues is not only fundamental to an understanding of embryonic development, but is also relevant in tissue engineering and in other environmental and industrial processes involving the growth and homeostasis of biological systems. Growth and organization processes are also important in many tissue degeneration and regeneration processes, such as tumour growth, tissue vascularization, heart and muscle functionality, and cardio-vascular diseases.

Reliability Based Optimal Design of Vertical Breakwaters Modelled as a Series System Failure

DEFF Research Database (Denmark)

Christiani, E.; Burcharth, H. F.; Sørensen, John Dalsgaard

1996-01-01

Reliability based design of monolithic vertical breakwaters is considered. Probabilistic models of important failure modes such as sliding and rupture failure in the rubble mound and the subsoil are described. Characterisation of the relevant stochastic parameters are presented, and relevant design...... variables are identified and an optimal system reliability formulation is presented. An illustrative example is given....

Location Criteria Relevant for Sustainability of Social Housing Model

Directory of Open Access Journals (Sweden)

Petković-Grozdanović Nataša

2016-01-01

Full Text Available Social housing models, which had began to develop during the last century, for their only objective had a need to overcome the housing problems of socially vulnerable categories. However, numerous studies have shown that these social categories, because of their low social status, are highly susceptible to various psychological and sociological problems. On the other hand a low level of quality, which was common for social housing dwellings, has further aggravated these problems by initiating trouble behaviours among tenants, affecting social exclusion and segregation. Contemporary social housing models are therefore conceptualized in a way to provide a positive psycho-sociological impact on their tenants. Therefore the planning approach in social housing should be such to: support important functions in daily life routines; promote tolerance and cooperation; influence on a sense of social order and belonging; affect the socialization of the tenant and their integration into the wider community; and improve social cohesion. Analysis of the influential location parameters of immediate and wider social housing environment strive to define the ones relevant to the life quality of social housing tenants and therefore influence on the sustainability of social housing model.

Present status on atomic and molecular data relevant to fusion plasma diagnostics and modeling

International Nuclear Information System (INIS)

Tawara, H.

1997-01-01

This issue is the collection of the paper presented status on atomic and molecular data relevant to fusion plasma diagnostics and modeling. The 10 of the presented papers are indexed individually. (J.P.N.)

Model systems to study immunomodulation in domestic food animals.

Science.gov (United States)

Roth, J A; Flaming, K P

1990-01-01

Development of immunomodulators for use in food producing animals is an active area of research. This research has generally incorporated aspects of immunosuppression in model systems. This methodology is appropriate because most of the research has been aimed at developing immunomodulators for certain economically significant diseases in which immunosuppression is believed to be an important component of their pathogenesis. The primary focus has been on stress-associated diseases (especially bovine respiratory disease), infectious diseases in young animals, and mastitis. The model systems used have limitations, but they have demonstrated that immunomodulators are capable of significantly increasing resistance to these important infectious disease syndromes. As our understanding of molecular immunology increases and as more potential immunomodulators become available, the use of relevant model systems should greatly aid advancement in the field of immunomodulation.

The endocannabinoid system and its relevance for nutrition

DEFF Research Database (Denmark)

Maccarrone, Mauro; Gasperi, Valeria; Catani, Maria Valeria

2010-01-01

Endocannabinoids bind to cannabinoid, vanilloid, and peroxisome proliferator-activated receptors. The biological actions of these polyunsaturated lipids are controlled by key agents responsible for their synthesis, transport and degradation, which together form an endocannabinoid system (ECS......). In the past few years, evidence has been accumulated for a role of the ECS in regulating food intake and energy balance, both centrally and peripherally. In addition, up-regulation of the ECS in the gastrointestinal tract has a potential impact on inflammatory bowel diseases. In this review, the main features...... of the ECS are summarized in order to put in better focus our current knowledge of the nutritional relevance of endocannabinoid signaling and of its role in obesity, cardiovascular pathologies, and gastrointestinal diseases. The central and peripheral pathways that underlie these effects are discussed...

Mathematical approaches for complexity/predictivity trade-offs in complex system models : LDRD final report.

Energy Technology Data Exchange (ETDEWEB)

Goldsby, Michael E.; Mayo, Jackson R.; Bhattacharyya, Arnab (Massachusetts Institute of Technology, Cambridge, MA); Armstrong, Robert C.; Vanderveen, Keith

2008-09-01

The goal of this research was to examine foundational methods, both computational and theoretical, that can improve the veracity of entity-based complex system models and increase confidence in their predictions for emergent behavior. The strategy was to seek insight and guidance from simplified yet realistic models, such as cellular automata and Boolean networks, whose properties can be generalized to production entity-based simulations. We have explored the usefulness of renormalization-group methods for finding reduced models of such idealized complex systems. We have prototyped representative models that are both tractable and relevant to Sandia mission applications, and quantified the effect of computational renormalization on the predictive accuracy of these models, finding good predictivity from renormalized versions of cellular automata and Boolean networks. Furthermore, we have theoretically analyzed the robustness properties of certain Boolean networks, relevant for characterizing organic behavior, and obtained precise mathematical constraints on systems that are robust to failures. In combination, our results provide important guidance for more rigorous construction of entity-based models, which currently are often devised in an ad-hoc manner. Our results can also help in designing complex systems with the goal of predictable behavior, e.g., for cybersecurity.

Towards Intelligible Query Processing in Relevance Feedback-Based Image Retrieval Systems

OpenAIRE

Mohammed, Belkhatir

2008-01-01

We have specified within the scope of this paper a framework combining semantics and relational (spatial) characterizations within a coupled architecture in order to address the semantic gap. This framework is instantiated by an operational model based on a sound logic-based formalism, allowing to define a representation for image documents and a matching function to compare index and query structures. We have specified a query framework coupling keyword-based querying with a relevance feedba...

Reliability evaluation of the power supply of an electrical power net for safety-relevant applications

International Nuclear Information System (INIS)

Dominguez-Garcia, Alejandro D.; Kassakian, John G.; Schindall, Joel E.

2006-01-01

In this paper, we introduce a methodology for the dependability analysis of new automotive safety-relevant systems. With the introduction of safety-relevant electronic systems in cars, it is necessary to carry out a thorough dependability analysis of those systems to fully understand and quantify the failure mechanisms in order to improve the design. Several system level FMEAs are used to identify the different failure modes of the system and, a Markov model is constructed to quantify their probability of occurrence. A new power net architecture with application to new safety-relevant automotive systems, such as Steer-by-Wire or Brake-by-Wire, is used as a case study. For these safety-relevant loads, loss of electric power supply means loss of control of the vehicle. It is, therefore, necessary and critical to develop a highly dependable power net to ensure power to these loads under all circumstances

CESAR cost-efficient methods and processes for safety-relevant embedded systems

CERN Document Server

Wahl, Thomas

2013-01-01

The book summarizes the findings and contributions of the European ARTEMIS project, CESAR, for improving and enabling interoperability of methods, tools, and processes to meet the demands in embedded systems development across four domains - avionics, automotive, automation, and rail. The contributions give insight to an improved engineering and safety process life-cycle for the development of safety critical systems. They present new concept of engineering tools integration platform to improve the development of safety critical embedded systems and illustrate capacity of this framework for end-user instantiation to specific domain needs and processes. They also advance state-of-the-art in component-based development as well as component and system validation and verification, with tool support. And finally they describe industry relevant evaluated processes and methods especially designed for the embedded systems sector as well as easy adoptable common interoperability principles for software tool integratio...

Percolation of binary disk systems: Modeling and theory

International Nuclear Information System (INIS)

Meeks, Kelsey; Pantoya, Michelle L.

2017-01-01

The dispersion and connectivity of particles with a high degree of polydispersity is relevant to problems involving composite material properties and reaction decomposition prediction and has been the subject of much study in the literature. This paper utilizes Monte Carlo models to predict percolation thresholds for a two-dimensional systems containing disks of two different radii. Monte Carlo simulations and spanning probability are used to extend prior models into regions of higher polydispersity than those previously considered. A correlation to predict the percolation threshold for binary disk systems is proposed based on the extended dataset presented in this work and compared to previously published correlations. Finally, a set of boundary conditions necessary for a good fit is presented, and a condition for maximizing percolation threshold for binary disk systems is suggested.

Modeling and Simulation Resource Repository (MSRR)(System Engineering/Integrated M&S Management Approach

Science.gov (United States)

Milroy, Audrey; Hale, Joe

2006-01-01

NASA s Exploration Systems Mission Directorate (ESMD) is implementing a management approach for modeling and simulation (M&S) that will provide decision-makers information on the model s fidelity, credibility, and quality, including the verification, validation and accreditation information. The NASA MSRR will be implemented leveraging M&S industry best practices. This presentation will discuss the requirements that will enable NASA to capture and make available the "meta data" or "simulation biography" data associated with a model. The presentation will also describe the requirements that drive how NASA will collect and document relevant information for models or suites of models in order to facilitate use and reuse of relevant models and provide visibility across NASA organizations and the larger M&S community.

Knowledge-based driver assistance systems traffic situation description and situation feature relevance

CERN Document Server

Huelsen, Michael

2014-01-01

The comprehension of a traffic situation plays a major role in driving a vehicle. Interpretable information forms a basis for future projection, decision making and action performing, such as navigating, maneuvering and driving control. Michael Huelsen provides an ontology-based generic traffic situation description capable of supplying various advanced driver assistance systems with relevant information about the current traffic situation of a vehicle and its environment. These systems are enabled to perform reasonable actions and approach visionary goals such as injury and accident free driv

Modelling of the activity system - development of an evaluation method for integrated system validation

International Nuclear Information System (INIS)

Norros, Leena; Savioja, Paula

2004-01-01

In this paper we present our recent research which focuses on creating an evaluation method for human-system interfaces of complex systems. The method is aimed for use in the validation of modernised nuclear power plant (NPP) control rooms, and other complex systems with high reliability requirements. The task in validation is to determine whether the human-system functions safely and effectively. This question can be operationalized to the selection of relevant operational features and their appropriate acceptance criteria. Thus, there is a need to ensure that the results of the evaluation can be generalized so that they serve the purpose of integrated system validation. The definition of the appropriate acceptance criteria provides basis for the judgement of the appropriateness of the performance of the system. We propose that the operational situations and the acceptance criteria should be defined based on modelling of the NPP operation that is comprehended as an activity system. We developed a new core-tasks modelling framework. It is a formative modelling approach that combines causal, functional and understanding explanations of system performance. In this paper we reason how modelling can be used as a medium to determine the validity of the emerging control room system. (Author)

Geometric model of pseudo-distance measurement in satellite location systems

Science.gov (United States)

Panchuk, K. L.; Lyashkov, A. A.; Lyubchinov, E. V.

2018-04-01

The existing mathematical model of pseudo-distance measurement in satellite location systems does not provide a precise solution of the problem, but rather an approximate one. The existence of such inaccuracy, as well as bias in measurement of distance from satellite to receiver, results in inaccuracy level of several meters. Thereupon, relevance of refinement of the current mathematical model becomes obvious. The solution of the system of quadratic equations used in the current mathematical model is based on linearization. The objective of the paper is refinement of current mathematical model and derivation of analytical solution of the system of equations on its basis. In order to attain the objective, geometric analysis is performed; geometric interpretation of the equations is given. As a result, an equivalent system of equations, which allows analytical solution, is derived. An example of analytical solution implementation is presented. Application of analytical solution algorithm to the problem of pseudo-distance measurement in satellite location systems allows to improve the accuracy such measurements.

Modeling and Simulation for Mission Operations Work System Design

Science.gov (United States)

Sierhuis, Maarten; Clancey, William J.; Seah, Chin; Trimble, Jay P.; Sims, Michael H.

2003-01-01

Work System analysis and design is complex and non-deterministic. In this paper we describe Brahms, a multiagent modeling and simulation environment for designing complex interactions in human-machine systems. Brahms was originally conceived as a business process design tool that simulates work practices, including social systems of work. We describe our modeling and simulation method for mission operations work systems design, based on a research case study in which we used Brahms to design mission operations for a proposed discovery mission to the Moon. We then describe the results of an actual method application project-the Brahms Mars Exploration Rover. Space mission operations are similar to operations of traditional organizations; we show that the application of Brahms for space mission operations design is relevant and transferable to other types of business processes in organizations.

The Development of a Fault Tree Model for Balance of Plant System

International Nuclear Information System (INIS)

Hwang, Mee Jeong; Park, Jin Hee; Lim, Ho Gon

2011-01-01

In this paper, we propose a fault tree modeling method for BOP (balance of plant) system to develop a combined risk model and trip model, and the application plans of the developed model. Where, the trip means the reactor trip and turbine and generator trip. We have usually modeled the safety-related systems and their supporting systems to assess the risk analysis of a nuclear power plant. However, the BOP system.s condition change induces the risk change. That is, the BOP system.s condition is relevant to plants. performance and affects to the plant risk. The existing model for BOP systems is a simplified system model or SPV (Single-point vulnerability) evaluation model. However, these models are not effective enough to use for the plant's performance evaluation. Also, lately an integrated decision-making framework is required for risk-informed applications. The methods for monitoring the performance of a nuclear power plant differ from the purpose. For example, MSPI (mitigating system performance index) and MR (maintenance rule) use different methods and indexes to monitor the performance. Therefore, for consistent decision-making, it is necessary to develop a risk assessment model including a systems model inducing reactor trip. The system.s model inducing reactor trip and turbine/generator trip is defined as the 'trip model'

Elements of a collaborative systems model within the aerospace industry

Science.gov (United States)

Westphalen, Bailee R.

2000-10-01

Scope and method of study. The purpose of this study was to determine the components of current aerospace collaborative efforts. There were 44 participants from two selected groups surveyed for this study. Nineteen were from the Oklahoma Air National Guard based in Oklahoma City representing the aviation group. Twenty-five participants were from the NASA Johnson Space Center in Houston representing the aerospace group. The surveys for the aviation group were completed in reference to planning missions necessary to their operations. The surveys for the aerospace group were completed in reference to a well-defined and focused goal from a current mission. A questionnaire was developed to survey active participants of collaborative systems in order to consider various components found within the literature. Results were analyzed and aggregated through a database along with content analysis of open-ended question comments from respondents. Findings and conclusions. This study found and determined elements of a collaborative systems model in the aerospace industry. The elements were (1) purpose or mission for the group or team; (2) commitment or dedication to the challenge; (3) group or team meetings and discussions; (4) constraints of deadlines and budgets; (5) tools and resources for project and simulations; (6) significant contributors to the collaboration; (7) decision-making formats; (8) reviews of project; (9) participants education and employment longevity; (10) cross functionality of team or group members; (11) training on the job plus teambuilding; (12) other key elements identified relevant by the respondents but not included in the model such as communication and teamwork; (13) individual and group accountability; (14) conflict, learning, and performance; along with (15) intraorganizational coordination. These elements supported and allowed multiple individuals working together to solve a common problem or to develop innovation that could not have been

Modeling of wind turbines for power system studies

Energy Technology Data Exchange (ETDEWEB)

Petru, T.

2001-05-01

When wind turbines are installed into the electric grid, the power quality is affected. Today, strict installation recommendations often prevail due to a lack of knowledge on this subject. Consequently, it is important to predict the impact of wind turbines on the electric grid before the turbines are installed. The thesis describes relevant power quality issues, discusses different configurations of wind turbines with respect to power quality and draw requirements regarding wind turbine modeling. A model of a stall-regulated, fixed-speed wind turbine system is introduced and its power quality impact on the electric grid is evaluated. The model is verified with field measurements.

Dynamic Causal Models and Autopoietic Systems

Directory of Open Access Journals (Sweden)

OLIVIER DAVID

2007-01-01

Full Text Available Dynamic Causal Modelling (DCM and the theory of autopoietic systems are two important conceptual frameworks. In this review, we suggest that they can be combined to answer important questions about self-organising systems like the brain. DCM has been developed recently by the neuroimaging community to explain, using biophysical models, the non-invasive brain imaging data are caused by neural processes. It allows one to ask mechanistic questions about the implementation of cerebral processes. In DCM the parameters of biophysical models are estimated from measured data and the evidence for each model is evaluated. This enables one to test different functional hypotheses (i.e., models for a given data set. Autopoiesis and related formal theories of biological systems as autonomous machines represent a body of concepts with many successful applications. However, autopoiesis has remained largely theoretical and has not penetrated the empiricism of cognitive neuroscience. In this review, we try to show the connections that exist between DCM and autopoiesis. In particular, we propose a simple modification to standard formulations of DCM that includes autonomous processes. The idea is to exploit the machinery of the system identification of DCMs in neuroimaging to test the face validity of the autopoietic theory applied to neural subsystems. We illustrate the theoretical concepts and their implications for interpreting electroencephalographic signals acquired during amygdala stimulation in an epileptic patient. The results suggest that DCM represents a relevant biophysical approach to brain functional organisation, with a potential that is yet to be fully evaluated

Malaria in pregnancy: the relevance of animal models for vaccine development.

Science.gov (United States)

Doritchamou, Justin; Teo, Andrew; Fried, Michal; Duffy, Patrick E

2017-10-06

Malaria during pregnancy due to Plasmodium falciparum or P. vivax is a major public health problem in endemic areas, with P. falciparum causing the greatest burden of disease. Increasing resistance of parasites and mosquitoes to existing tools, such as preventive antimalarial treatments and insecticide-treated bed nets respectively, is eroding the partial protection that they offer to pregnant women. Thus, development of effective vaccines against malaria during pregnancy is an urgent priority. Relevant animal models that recapitulate key features of the pathophysiology and immunology of malaria in pregnant women could be used to accelerate vaccine development. This review summarizes available rodent and nonhuman primate models of malaria in pregnancy, and discusses their suitability for studies of biologics intended to prevent or treat malaria in this vulnerable population.

Relevance of Discrecionary Accruals in Ohlson Model: the Case of Mexico

Directory of Open Access Journals (Sweden)

Rocío Durán-Vázquez

2012-01-01

Full Text Available This study applied the modified Jones´ model (1991 for selected companies of Mexico. This model aims to assess the impact of Discretionary Accrual Information (DAI on financial reporting statements, in order to identify the value relevance of “earnings quality”. We applied methodological criteria of Chung et al (2005 and Mukit & Iskandar (2009. We analyzed financial information of the 35 stock included in the Index of Prices and Quotations (IPC of the Mexican Stock Exchange (BMV for the period 2000 to 2011. 19 companies met the specifications of the model, for 48 quarters of information. The analysis was done in three parts: first, an analysis of the modified Jones´ model under panel data considerations by using fixed effects and adjustments of performing autocorrelation of order 1; second, a correlation analysis between the residuals of the modified Jones´ model and the return of stock price in 3 annual closings years of study: 2007, 2008 and 2009; and third, we incorporated this variable (DAI in the Ohlson model (of the financial and corporate accounting literature and we tested it with panel data analysis, under fixed effects, throughout the study period.

Modelling of cyclopentane promoted gas hydrate systems for carbon dioxide capture processes

DEFF Research Database (Denmark)

Herslund, Peter Jørgensen; Thomsen, Kaj; Abildskov, Jens

2014-01-01

A thermodynamic model based on the Cubic-Plus-Association equation of state and the van der Waals-Platteeuw hydrate model is applied to perform a thermodynamic evaluation of gas hydrate forming systems relevant for post-combustion carbon dioxide capture.A modelling study of both fluid phase...... behaviour and hydrate phase behaviour is presented. Cycloalkanes ranging from cyclopropane to cyclohexane, represents a challenge for CPA, both in the description of the pure component densities and for liquid-liquid equilibrium (LLE) in the binary systems with water. It is concluded that an insufficient...

The application of system dynamics modelling to environmental health decision-making and policy - a scoping review.

Science.gov (United States)

Currie, Danielle J; Smith, Carl; Jagals, Paul

2018-03-27

Policy and decision-making processes are routinely challenged by the complex and dynamic nature of environmental health problems. System dynamics modelling has demonstrated considerable value across a number of different fields to help decision-makers understand and predict the dynamic behaviour of complex systems in support the development of effective policy actions. In this scoping review we investigate if, and in what contexts, system dynamics modelling is being used to inform policy or decision-making processes related to environmental health. Four electronic databases and the grey literature were systematically searched to identify studies that intersect the areas environmental health, system dynamics modelling, and decision-making. Studies identified in the initial screening were further screened for their contextual, methodological and application-related relevancy. Studies deemed 'relevant' or 'highly relevant' according to all three criteria were included in this review. Key themes related to the rationale, impact and limitation of using system dynamics in the context of environmental health decision-making and policy were analysed. We identified a limited number of relevant studies (n = 15), two-thirds of which were conducted between 2011 and 2016. The majority of applications occurred in non-health related sectors (n = 9) including transportation, public utilities, water, housing, food, agriculture, and urban and regional planning. Applications were primarily targeted at micro-level (local, community or grassroots) decision-making processes (n = 9), with macro-level (national or international) decision-making to a lesser degree. There was significant heterogeneity in the stated rationales for using system dynamics and the intended impact of the system dynamics model on decision-making processes. A series of user-related, technical and application-related limitations and challenges were identified. None of the reported limitations or challenges

DSA-guided embolization in establishing different canine spinal cord ischemia models and relevant diffusion-weighted imaging study

International Nuclear Information System (INIS)

Zhang Jingsong; Sun Lijun; Huan Yi; He Hongde; Zhang Xuexin; Zhao Haitao; Zhang Jing; Zhang Xijing

2006-01-01

Objective: To evaluate DSA-guided embolization in establishing different spinal cord ischemia models of canine and relevant diffusion-weighted imaging (DWI) application. Methods: Nine canines were randomly divided into three groups with different matching of lipiodol and diatrizoate meglumine which were injected into bilateral intercostal arteries at 9-11 level guided by DSA monitor. Then observe the changes of motor function and pathologic findings, especially perform routine MRI and DWI by a 1.5 T MR system. Results: Except one case, 8 embolization models were established successfully. Among three groups, slight-group got slight injury and muscle power was about 3-5 grade and range of injury was about two vertebra distance; medium-group presented obvious paraplegia and muscle power was 0-1 grade and range of injury was between 3-4 vertebra distance; severe-group showed greater severity and larger range of injury. All lesions presented high signals at routine MRI and DWI. Conclusion: Using different matching of lipiodol and diatrizoate meglumine can establish different spinal cord ischemia models of canine by DSA- guided embolization and DWI can be performed successfully by 1.5 T MR system, which may be a good method for advanced study of spinal cord ischemia. (authors)

Design and Modeling of a Novel Torque Vectoring Differential System

Directory of Open Access Journals (Sweden)

Chen Yu-Fan

2017-01-01

Full Text Available In this paper, a new concept torque vectoring differential (TVD system is presented. It is shown that the structure and the mechanism of the system, the operating methods, and the parameters design by a simulation program, i.e. SimulationX. First of all, the structure of the new TVD system is introduced, as well as the relevant mechanic equations. Second, we attempt to verify the feasibility and accuracy of SimulationX through establishing a simple mechanical model by MATLAB, so that the further modeling and simulation results of the new TVD system will be credible. Then, the simulation results at the setting conditions are presented. Finally, the sensitivity of the design parameters is analyzed, including adjusting the braking torque and the dimensions of the gear sets in the differential. According to these results, the characteristics of the new TVD system can be derived in order to develop the whole system with vehicle dynamic model in the next stage.

Strategic relevance and accountability expectations: new perspectives for health care information technology design.

Science.gov (United States)

Tan, J K; Modrow, R E

1999-05-01

In this article, we discuss the traditional systems analysis perspective on end-user information requirements analysis and extend it to merge with the new accountability expectations perspective to guide the future planning and design of health organization information systems. Underlying the strategic relevance of health care information technology (HCIT) are three critical questions: (1) What is the ideal HCIT model for the health organization in terms of achieving strategic expertise and competitive advantage? Specifically, how does this model link industry performance standards with organizational performance and accountability expectations? (2) How should the limitations of past HCIT models be reconciled to the benefits presented by the superior arrangement of the ideal model in the context of changing accountability expectations? (3) How should alternative HCIT solutions be evaluated in light of evidence-based accountability and organizational performance benchmarking? Insights into these questions will ensure that health care managers, HCIT practitioners and researchers can continue to focus on the most critical issues in harnessing today's fast-paced changing technologies for evolving strategically relevant, performance-based health organization systems.

New statistical methodology, mathematical models, and data bases relevant to the assessment of health impacts of energy technologies

International Nuclear Information System (INIS)

Ginevan, M.E.; Collins, J.J.; Brown, C.D.; Carnes, B.A.; Curtiss, J.B.; Devine, N.

1981-01-01

The present research develops new statistical methodology, mathematical models, and data bases of relevance to the assessment of health impacts of energy technologies, and uses these to identify, quantify, and pedict adverse health effects of energy related pollutants. Efforts are in five related areas including: (1) evaluation and development of statistical procedures for the analysis of death rate data, disease incidence data, and large scale data sets; (2) development of dose response and demographic models useful in the prediction of the health effects of energy technologies; (3) application of our method and models to analyses of the health risks of energy production; (4) a reanalysis of the Tri-State leukemia survey data, focusing on the relationship between myelogenous leukemia risk and diagnostic x-ray exposure; and (5) investigation of human birth weights as a possible early warning system for the effects of environmental pollution

Theoretical Relevance of Neuropsychological Data for Connectionist Modelling

Directory of Open Access Journals (Sweden)

Mauricio Iza

2011-05-01

Full Text Available The symbolic information-processing paradigm in cognitive psychology has met a growing challenge from neural network models over the past two decades. While neuropsychological
evidence has been of great utility to theories concerned with information processing, the real question is, whether the less rigid connectionist models provide valid, or enough, information
concerning complex cognitive structures. In this work, we will discuss the theoretical implications that neuropsychological data posits for modelling cognitive systems.

How fear-relevant illusory correlations might develop and persist in anxiety disorders: A model of contributing factors.

Science.gov (United States)

Wiemer, Julian; Pauli, Paul

2016-12-01

Fear-relevant illusory correlations (ICs) are defined as the overestimation of the relationship between a fear-relevant stimulus and aversive consequences. ICs reflect biased cognitions affecting the learning and unlearning of fear in anxiety disorders, and a deeper understanding might help to improve treatment. A model for the maintenance of ICs is proposed that highlights the importance of amplified aversiveness and salience of fear-relevant outcomes, impaired executive contingency monitoring and an availability heuristic. The model explains why ICs are enhanced in high fearful individuals and allows for some implications that might be applied to augment the effectiveness of cognitive behavior therapy, such as emotion regulation and the direction of attention to non-aversive experiences. Finally, we suggest possible future research directions and an alternative measure of ICs. Copyright © 2016 Elsevier Ltd. All rights reserved.

Radioecological models for inland water systems

International Nuclear Information System (INIS)

Raskob, W.; Popov, A.; Zheleznyak, M.J.

1998-04-01

Following a nuclear accident, radioactivity may either be directly discharged into rivers, lakes and reservoirs or - after the re-mobilisation of dry and wet deposited material by rain events - may result in the contamination of surface water bodies. These so-called aquatic exposure pathways are still missing in the decision support system IMIS/PARK. Therefore, a study was launched to analyse aquatic and radioecological models with respect to their applicability for assessing the radiation exposure of the population. The computer codes should fulfil the following requirements: 1. to quantify the impact of radionuclides in water systems from direct deposition and via runoff, both dependent on time and space, 2. to forecast the activity concentration in water systems (rivers and lakes) and sediment, both dependent on time and space, and 3. to assess the time dependent activity concentration in fish. To that purpose, a literature survey was conducted to collect a list of all relevant computer models potentially suitable for these tasks. In addition, a detailed overview of the key physical process was provided, which should be considered in the models. Based on the three main processes, 9 codes were selected for the runoff from large watersheds, 19 codes for the river transport and 14 for lakes. (orig.) [de

Structural characterisation of medically relevant protein assemblies by integrating mass spectrometry with computational modelling.

Science.gov (United States)

Politis, Argyris; Schmidt, Carla

2018-03-20

Structural mass spectrometry with its various techniques is a powerful tool for the structural elucidation of medically relevant protein assemblies. It delivers information on the composition, stoichiometries, interactions and topologies of these assemblies. Most importantly it can deal with heterogeneous mixtures and assemblies which makes it universal among the conventional structural techniques. In this review we summarise recent advances and challenges in structural mass spectrometric techniques. We describe how the combination of the different mass spectrometry-based methods with computational strategies enable structural models at molecular levels of resolution. These models hold significant potential for helping us in characterizing the function of protein assemblies related to human health and disease. In this review we summarise the techniques of structural mass spectrometry often applied when studying protein-ligand complexes. We exemplify these techniques through recent examples from literature that helped in the understanding of medically relevant protein assemblies. We further provide a detailed introduction into various computational approaches that can be integrated with these mass spectrometric techniques. Last but not least we discuss case studies that integrated mass spectrometry and computational modelling approaches and yielded models of medically important protein assembly states such as fibrils and amyloids. Copyright © 2017 The Author(s). Published by Elsevier B.V. All rights reserved.

Repository environmental parameters and models/methodologies relevant to assessing the performance of high-level waste packages in basalt, tuff, and salt

Energy Technology Data Exchange (ETDEWEB)

Claiborne, H.C.; Croff, A.G.; Griess, J.C.; Smith, F.J.

1987-09-01

This document provides specifications for models/methodologies that could be employed in determining postclosure repository environmental parameters relevant to the performance of high-level waste packages for the Basalt Waste Isolation Project (BWIP) at Richland, Washington, the tuff at Yucca Mountain by the Nevada Test Site, and the bedded salt in Deaf Smith County, Texas. Guidance is provided on the identify of the relevant repository environmental parameters; the models/methodologies employed to determine the parameters, and the input data base for the models/methodologies. Supporting studies included are an analysis of potential waste package failure modes leading to identification of the relevant repository environmental parameters, an evaluation of the credible range of the repository environmental parameters, and a summary of the review of existing models/methodologies currently employed in determining repository environmental parameters relevant to waste package performance. 327 refs., 26 figs., 19 tabs.

Repository environmental parameters and models/methodologies relevant to assessing the performance of high-level waste packages in basalt, tuff, and salt

International Nuclear Information System (INIS)

Claiborne, H.C.; Croff, A.G.; Griess, J.C.; Smith, F.J.

1987-09-01

This document provides specifications for models/methodologies that could be employed in determining postclosure repository environmental parameters relevant to the performance of high-level waste packages for the Basalt Waste Isolation Project (BWIP) at Richland, Washington, the tuff at Yucca Mountain by the Nevada Test Site, and the bedded salt in Deaf Smith County, Texas. Guidance is provided on the identify of the relevant repository environmental parameters; the models/methodologies employed to determine the parameters, and the input data base for the models/methodologies. Supporting studies included are an analysis of potential waste package failure modes leading to identification of the relevant repository environmental parameters, an evaluation of the credible range of the repository environmental parameters, and a summary of the review of existing models/methodologies currently employed in determining repository environmental parameters relevant to waste package performance. 327 refs., 26 figs., 19 tabs

Laboratory Studies of Ethane Ice Relevant to Outer Solar System Surfaces

Science.gov (United States)

Moore, Marla H.; Hudson, Reggie; Raines, Lily

2009-01-01

Oort Cloud comets, as well as TNOs Makemake (2045 FYg), Quaoar, and Pluto, are known to contain ethane. However, even though this molecule is found on several outer Solar System objects relatively little information is available about its amorphous and crystalline phases. In new experiments, we have prepared ethane ices at temperatures applicable to the outer Solar System, and have heated and ion-irradiated these ices to study phase changes and ethane's radiation chemistry using mid-IR spectroscopy (2.2 - 16.6 microns). Included in our work is the meta-stable phase that exists at 35 - 55 K. These results, including newly obtained optical constants, are relevant to ground-based observational campaigns, the New Horizons mission, and supporting laboratory work. An improved understanding of solid-phase ethane may contribute to future searches for this and other hydrocarbons in the outer Solar System.

Using the Characteristics of Documents, Users and Tasks to Predict the Situational Relevance of Health Web Documents

Directory of Open Access Journals (Sweden)

Melinda Oroszlányová

2017-09-01

Full Text Available Relevance is usually estimated by search engines using document content, disregarding the user behind the search and the characteristics of the task. In this work, we look at relevance as framed in a situational context, calling it situational relevance, and analyze whether it is possible to predict it using documents, users and tasks characteristics. Using an existing dataset composed of health web documents, relevance judgments for information needs, user and task characteristics, we build a multivariate prediction model for situational relevance. Our model has an accuracy of 77.17%. Our findings provide insights into features that could improve the estimation of relevance by search engines, helping to conciliate the systemic and situational views of relevance. In a near future we will work on the automatic assessment of document, user and task characteristics.

Aerial measuring system sensor modeling

International Nuclear Information System (INIS)

Detwiler, Rebecca

2002-01-01

The AMS fixed-wing and rotary-wing systems are critical National Nuclear Security Administration (NNSA) Emergency Response assets. This project is principally focused on the characterization of the sensors utilized with these systems via radiation transport calculations. The Monte Carlo N-Particle code (MCNP) which has been developed at Los Alamos National Laboratory was used to model the detector response of the AMS fixed wing and helicopter systems. To validate the calculations, benchmark measurements were made for simple source-detector configurations. The fixed-wing system is an important tool in response to incidents involving the release of mixed fission products (a commercial power reactor release), the threat or actual explosion of a Radiological Dispersal Device, and the loss or theft of a large industrial source (a radiography source). Calculations modeled the spectral response for the sensors contained, a 3-element NaI detector pod and HpGe detector, in the relevant energy range of 50 keV to 3 MeV. NaI detector responses were simulated for both point and distributed surface sources as a function of gamma energy and flying altitude. For point sources, photo-peak efficiencies were calculated for a zero radial distance and an offset equal to the altitude. For distributed sources approximating infinite plane, gross count efficiencies were calculated and normalized to a uniform surface deposition of 1 C i/m2

Effect and relevance of the artificial drainage system when assessing the hydrologic impact of the imperviousness distribution within the watershed

Science.gov (United States)

Thenoux, M.; Gironas, J. A.; Mejia, A.

2013-12-01

Cities and urban growth have relevant environmental and social impacts, which could eventually be enhanced or reduced during the urban planning process. From the point of view of hydrology, impermeability and natural soil compaction are one of the main problems that urbanization brings to watershed. Previous studies demonstrate and quantify the impacts of the distribution of imperviousness in a watershed, both on runoff volumes and flow, and the quality and integrity of streams and receiving bodies. Moreover, some studies have investigated the optimal distribution of imperviousness, based on simulating different scenarios of land use change and its effects on runoff, mostly at the outlet of the watershed. However, these studies typically do not address the impact of artificial drainage system associated with the imperviousness scenarios, despite it is known that storm sewer coverage affects the flow accumulation and generation of flow hydrographs. This study seeks to quantify the effects and relevance of the artificial system when it comes to assess the hydrological impacts of the spatial distribution of imperviousness and to determine the characteristics of this influence. For this purpose, an existing model to generate imperviousness distribution scenarios is coupled with a model developed to automatically generate artificial drainage networks. These models are applied to a natural watershed to generate a variety of imperviousness and storm sewer layout scenarios, which are evaluate with a morphoclimatic instantaneous unit hydrograph model. We first tested the ability of this approach to represent the joint effects of imperviousness (i.e. level and distribution) and storm sewer coverage. We then quantified the effects of these variables on the hydrological response, considering also different return period in order to take into account the variability of the precipitation regime. Overall, we show that the layout and spatial coverage of the storm sewer system

Modelling low energy electron and positron tracks in biologically relevant media

International Nuclear Information System (INIS)

Blanco, F.; Munoz, A.; Almeida, D.; Ferreira da Silva, F.; Limao-Vieira, P.; Fuss, M.C.; Sanz, A.G.; Garcia, G.

2013-01-01

This colloquium describes an approach to incorporate into radiation damage models the effect of low and intermediate energy (0-100 eV) electrons and positrons, slowing down in biologically relevant materials (water and representative biomolecules). The core of the modelling procedure is a C++ computing programme named 'Low Energy Particle Track Simulation (LEPTS)', which is compatible with available general purpose Monte Carlo packages. Input parameters are carefully selected from theoretical and experimental cross section data and energy loss distribution functions. Data sources used for this purpose are reviewed showing examples of electron and positron cross section and energy loss data for interactions with different media of increasing complexity: atoms, molecules, clusters and condense matter. Finally, we show how such a model can be used to develop an effective dosimetric tool at the molecular level (i.e. nanodosimetry). Recent experimental developments to study the fragmentation induced in biologically material by charge transfer from neutrals and negative ions are also included. (authors)

Virtual design and optimization studies for industrial silicon microphones applying tailored system-level modeling

Science.gov (United States)

Kuenzig, Thomas; Dehé, Alfons; Krumbein, Ulrich; Schrag, Gabriele

2018-05-01

Maxing out the technological limits in order to satisfy the customers’ demands and obtain the best performance of micro-devices and-systems is a challenge of today’s manufacturers. Dedicated system simulation is key to investigate the potential of device and system concepts in order to identify the best design w.r.t. the given requirements. We present a tailored, physics-based system-level modeling approach combining lumped with distributed models that provides detailed insight into the device and system operation at low computational expense. The resulting transparent, scalable (i.e. reusable) and modularly composed models explicitly contain the physical dependency on all relevant parameters, thus being well suited for dedicated investigation and optimization of MEMS devices and systems. This is demonstrated for an industrial capacitive silicon microphone. The performance of such microphones is determined by distributed effects like viscous damping and inhomogeneous capacitance variation across the membrane as well as by system-level phenomena like package-induced acoustic effects and the impact of the electronic circuitry for biasing and read-out. The here presented model covers all relevant figures of merit and, thus, enables to evaluate the optimization potential of silicon microphones towards high fidelity applications. This work was carried out at the Technical University of Munich, Chair for Physics of Electrotechnology. Thomas Kuenzig is now with Infineon Technologies AG, Neubiberg.

Analyzing Cyber Security Threats on Cyber-Physical Systems Using Model-Based Systems Engineering

Science.gov (United States)

Kerzhner, Aleksandr; Pomerantz, Marc; Tan, Kymie; Campuzano, Brian; Dinkel, Kevin; Pecharich, Jeremy; Nguyen, Viet; Steele, Robert; Johnson, Bryan

2015-01-01

The spectre of cyber attacks on aerospace systems can no longer be ignored given that many of the components and vulnerabilities that have been successfully exploited by the adversary on other infrastructures are the same as those deployed and used within the aerospace environment. An important consideration with respect to the mission/safety critical infrastructure supporting space operations is that an appropriate defensive response to an attack invariably involves the need for high precision and accuracy, because an incorrect response can trigger unacceptable losses involving lives and/or significant financial damage. A highly precise defensive response, considering the typical complexity of aerospace environments, requires a detailed and well-founded understanding of the underlying system where the goal of the defensive response is to preserve critical mission objectives in the presence of adversarial activity. In this paper, a structured approach for modeling aerospace systems is described. The approach includes physical elements, network topology, software applications, system functions, and usage scenarios. We leverage Model-Based Systems Engineering methodology by utilizing the Object Management Group's Systems Modeling Language to represent the system being analyzed and also utilize model transformations to change relevant aspects of the model into specialized analyses. A novel visualization approach is utilized to visualize the entire model as a three-dimensional graph, allowing easier interaction with subject matter experts. The model provides a unifying structure for analyzing the impact of a particular attack or a particular type of attack. Two different example analysis types are demonstrated in this paper: a graph-based propagation analysis based on edge labels, and a graph-based propagation analysis based on node labels.

Thermochemical data for environmentally-relevant elements

International Nuclear Information System (INIS)

Markich, S.J.; Brown, P.L.

1999-01-01

This study provides an extensive stability constant (log K) database suitable for calculating the speciation of selected environmentally-relevant elements (H, Na, K, Ca, Mg, Fe, Mn, U, Al Pb, Zn, Cu and cd) in an aqueous system, where a model fulvic acid (comprising aspartic, citric, malonic, salicylic and tricarballylic acids) is used to simulate metal binding by dissolved organic material Stability constants for inorganic metal complexes and minerals were selected primarily from critical literature complications and/or reviews. In contrast, few critically evaluated data were available for metal complexes with aspartic, citric, malonic, salicylic and tricarballylic acids. Consequently, data from original research articles were carefully evaluated and compiled as part of the study, following defined selection criteria. to meet the objective of compiling a comprehensive and reliable database of stability constants, all relevant equilibria and species, ranging from simple binary metal complexes to more complex ternary and even quaternary, metal complexes were included where possible in addition to the selection of stability constants from empirical sources, estimates of stability constants were performed when this could be done reliably, based on the unified theory of metal ion complexation and/or linear tree energy relationships The stability constants are given as common logarithms (logo) in the form required by the HARPHRQ geochemical code and refer to the standard state, i.e 298.15 K (25 deg C), 10 5 Pa (1 atm) and, for all species, infinite dilution (ionic strength = 0 mol L -1 ). In addition to the compilation of stability constant data, an overview is given of geochemical speciation modelling in aqueous systems and available conceptual models of metal binding by humic substances. (authors)

Using small XML elements to support relevance

NARCIS (Netherlands)

G. Ramirez Camps (Georgina); T.H.W. Westerveld (Thijs); A.P. de Vries (Arjen)

2006-01-01

htmlabstractSmall XML elements are often estimated relevant by the retrieval model but they are not desirable retrieval units. This paper presents a generic model that exploits the information obtained from small elements. We identify relationships between small and relevant elements and use this

A state-of-the-art review of transportation systems evaluation techniques relevant to air transportation, volume 1. [urban planning and urban transportation using decision theory

Science.gov (United States)

Haefner, L. E.

1975-01-01

Mathematical and philosophical approaches are presented for evaluation and implementation of ground and air transportation systems. Basic decision processes are examined that are used for cost analyses and planning (i.e, statistical decision theory, linear and dynamic programming, optimization, game theory). The effects on the environment and the community that a transportation system may have are discussed and modelled. Algorithmic structures are examined and selected bibliographic annotations are included. Transportation dynamic models were developed. Citizen participation in transportation projects (i.e, in Maryland and Massachusetts) is discussed. The relevance of the modelling and evaluation approaches to air transportation (i.e, airport planning) is examined in a case study in St. Louis, Missouri.

Session 6: Dynamic Modeling and Systems Analysis

Science.gov (United States)

Csank, Jeffrey; Chapman, Jeffryes; May, Ryan

2013-01-01

These presentations cover some of the ongoing work in dynamic modeling and dynamic systems analysis. The first presentation discusses dynamic systems analysis and how to integrate dynamic performance information into the systems analysis. The ability to evaluate the dynamic performance of an engine design may allow tradeoffs between the dynamic performance and operability of a design resulting in a more efficient engine design. The second presentation discusses the Toolbox for Modeling and Analysis of Thermodynamic Systems (T-MATS). T-MATS is a Simulation system with a library containing the basic building blocks that can be used to create dynamic Thermodynamic Systems. Some of the key features include Turbo machinery components, such as turbines, compressors, etc., and basic control system blocks. T-MAT is written in the Matlab-Simulink environment and is open source software. The third presentation focuses on getting additional performance from the engine by allowing the limit regulators only to be active when a limit is danger of being violated. Typical aircraft engine control architecture is based on MINMAX scheme, which is designed to keep engine operating within prescribed mechanical/operational safety limits. Using a conditionally active min-max limit regulator scheme, additional performance can be gained by disabling non-relevant limit regulators

Determinants of dermal exposure relevant for exposure modelling in regulatory risk assessment.

Science.gov (United States)

Marquart, J; Brouwer, D H; Gijsbers, J H J; Links, I H M; Warren, N; van Hemmen, J J

2003-11-01

Risk assessment of chemicals requires assessment of the exposure levels of workers. In the absence of adequate specific measured data, models are often used to estimate exposure levels. For dermal exposure only a few models exist, which are not validated externally. In the scope of a large European research programme, an analysis of potential dermal exposure determinants was made based on the available studies and models and on the expert judgement of the authors of this publication. Only a few potential determinants appear to have been studied in depth. Several studies have included clusters of determinants into vaguely defined parameters, such as 'task' or 'cleaning and maintenance of clothing'. Other studies include several highly correlated parameters, such as 'amount of product handled', 'duration of task' and 'area treated', and separation of these parameters to study their individual influence is not possible. However, based on the available information, a number of determinants could clearly be defined as proven or highly plausible determinants of dermal exposure in one or more exposure situation. This information was combined with expert judgement on the scientific plausibility of the influence of parameters that have not been extensively studied and on the possibilities to gather relevant information during a risk assessment process. The result of this effort is a list of determinants relevant for dermal exposure models in the scope of regulatory risk assessment. The determinants have been divided into the major categories 'substance and product characteristics', 'task done by the worker', 'process technique and equipment', 'exposure control measures', 'worker characteristics and habits' and 'area and situation'. To account for the complex nature of the dermal exposure processes, a further subdivision was made into the three major processes 'direct contact', 'surface contact' and 'deposition'.

Evidence for the triadic model of adolescent brain development: Cognitive load and task-relevance of emotion differentially affect adolescents and adults

Directory of Open Access Journals (Sweden)

Sven C. Mueller

2017-08-01

Full Text Available In adults, cognitive control is supported by several brain regions including the limbic system and the dorsolateral prefrontal cortex (dlPFC when processing emotional information. However, in adolescents, some theories hypothesize a neurobiological imbalance proposing heightened sensitivity to affective material in the amygdala and striatum within a cognitive control context. Yet, direct neurobiological evidence is scarce. Twenty-four adolescents (12–16 and 28 adults (25–35 completed an emotional n-back working memory task in response to happy, angry, and neutral faces during fMRI. Importantly, participants either paid attention to the emotion (task-relevant condition or judged the gender (task-irrelevant condition. Behaviorally, for both groups, when happy faces were task-relevant, performance improved relative to when they were task-irrelevant, while performance decrements were seen for angry faces. In the dlPFC, angry faces elicited more activation in adults during low relative to high cognitive load (2-back vs. 0-back. By contrast, happy faces elicited more activation in the amygdala in adolescents when they were task-relevant. Happy faces also generally increased nucleus accumbens activity (regardless of relevance in adolescents relative to adults. Together, the findings are consistent with neurobiological models of adolescent brain development and identify neurodevelopmental differences in cognitive control emotion interactions.

Embedding Analogical Reasoning into 5E Learning Model: A Study of the Solar System

Science.gov (United States)

Devecioglu-Kaymakci, Yasemin

2016-01-01

The purpose of this study was to investigate how the 5E learning model affects learning about the Solar System when an analogical model is utilized in teaching. The data were gathered in an urban middle school 7th grade science course while teaching relevant astronomy topics. The analogical model developed by the researchers was administered to 20…

Functional System Dynamics

OpenAIRE

Ligterink, N.E.

2007-01-01

Functional system dynamics is the analysis, modelling, and simulation of continuous systems usually described by partial differential equations. From the infinite degrees of freedom of such systems only a finite number of relevant variables have to be chosen for a practical model description. The proper input and output of the system are an important part of the relevant variables.

Oxidative Stress Implications in the Affective Disorders: Main Biomarkers, Animal Models Relevance, Genetic Perspectives, and Antioxidant Approaches.

Science.gov (United States)

Balmus, Ioana Miruna; Ciobica, Alin; Antioch, Iulia; Dobrin, Romeo; Timofte, Daniel

2016-01-01

The correlation between the affective disorders and the almost ubiquitous pathological oxidative stress can be described in a multifactorial way, as an important mechanism of central nervous system impairment. Whether the obvious changes which occur in oxidative balance of the affective disorders are a part of the constitutive mechanism or a collateral effect yet remains as an interesting question. However it is now clear that oxidative stress is a component of these disorders, being characterized by different aspects in a disease-dependent manner. Still, there are a lot of controversies regarding the relevance of the oxidative stress status in most of the affective disorders and despite the fact that most of the studies are showing that the affective disorders development can be correlated to increased oxidative levels, there are various studies stating that oxidative stress is not linked with the mood changing tendencies. Thus, in this minireview we decided to describe the way in which oxidative stress is involved in the affective disorders development, by focusing on the main oxidative stress markers that could be used mechanistically and therapeutically in these deficiencies, the genetic perspectives, some antioxidant approaches, and the relevance of some animal models studies in this context.

New Perspectives on Rodent Models of Advanced Paternal Age: Relevance to Autism

Directory of Open Access Journals (Sweden)

Claire J Foldi

2011-06-01

Full Text Available Offspring of older fathers have an increased risk of various adverse health outcomes, including autism and schizophrenia. With respect to biological mechanisms for this association, there are many more germline cell divisions in the life history of a sperm relative to that of an oocyte. This leads to more opportunities for copy error mutations in germ cells from older fathers. Evidence also suggests that epigenetic patterning in the sperm from older men is altered. Rodent models provide an experimental platform to examine the association between paternal age and brain development. Several rodent models of advanced paternal age (APA have been published with relevance to intermediate phenotypes related to autism. All four published APA models vary in key features creating a lack of consistency with respect to behavioural phenotypes. A consideration of common phenotypes that emerge from these APA-related mouse models may be informative in the exploration of the molecular and neurobiological correlates of APA.

Nostalgia's place among self-relevant emotions.

Science.gov (United States)

van Tilburg, Wijnand A P; Wildschut, Tim; Sedikides, Constantine

2017-07-24

How is nostalgia positioned among self-relevant emotions? We tested, in six studies, which self-relevant emotions are perceived as most similar versus least similar to nostalgia, and what underlies these similarities/differences. We used multidimensional scaling to chart the perceived similarities/differences among self-relevant emotions, resulting in two-dimensional models. The results were revealing. Nostalgia is positioned among self-relevant emotions characterised by positive valence, an approach orientation, and low arousal. Nostalgia most resembles pride and self-compassion, and least resembles embarrassment and shame. Our research pioneered the integration of nostalgia among self-relevant emotions.

Multilevel Flow Modeling Based Decision Support System and Its Task Organization

DEFF Research Database (Denmark)

Zhang, Xinxin; Lind, Morten; Ravn, Ole

2013-01-01

For complex engineering systems, there is an increasing demand for safety and reliability. Decision support system (DSS) is designed to offer su-pervision and analysis about operational situations. A proper model representa-tion is required for DSS to understand the process knowledge. Multilevel ...... techniques of MFM reasoning and less mature yet relevant MFM concepts are considered. It also offers an architecture design of task organization for MFM software tools by using the concept of agent and technology of multiagent software system....

Impact relevance and usability of high resolution climate modeling and data

Energy Technology Data Exchange (ETDEWEB)

Arnott, James C. [Aspen Global Change Inst., Basalt, CO (United States)

2016-10-30

The Aspen Global Change Institute hosted a technical science workshop entitled, “Impact Relevance and Usability of High-Resolution Climate Modeling and Datasets,” on August 2-7, 2015 in Aspen, CO. Kate Calvin (Pacific Northwest National Laboratory), Andrew Jones (Lawrence Berkeley National Laboratory) and Jean-François Lamarque (NCAR) served as co-chairs for the workshop. The meeting included the participation of 29 scientists for a total of 145 participant days. Following the workshop, workshop co-chairs authored a meeting report published in Eos on April 27, 2016. Insights from the workshop directly contributed to the formation of a new DOE-supported project co-led by workshop co-chair Andy Jones. A subset of meeting participants continue to work on a publication on institutional innovations that can support the usability of high resolution modeling, among other sources of climate information.

A data integration approach for cell cycle analysis oriented to model simulation in systems biology

Directory of Open Access Journals (Sweden)

Mosca Ettore

2007-08-01

Full Text Available Abstract Background The cell cycle is one of the biological processes most frequently investigated in systems biology studies and it involves the knowledge of a large number of genes and networks of protein interactions. A deep knowledge of the molecular aspect of this biological process can contribute to making cancer research more accurate and innovative. In this context the mathematical modelling of the cell cycle has a relevant role to quantify the behaviour of each component of the systems. The mathematical modelling of a biological process such as the cell cycle allows a systemic description that helps to highlight some features such as emergent properties which could be hidden when the analysis is performed only from a reductionism point of view. Moreover, in modelling complex systems, a complete annotation of all the components is equally important to understand the interaction mechanism inside the network: for this reason data integration of the model components has high relevance in systems biology studies. Description In this work, we present a resource, the Cell Cycle Database, intended to support systems biology analysis on the Cell Cycle process, based on two organisms, yeast and mammalian. The database integrates information about genes and proteins involved in the cell cycle process, stores complete models of the interaction networks and allows the mathematical simulation over time of the quantitative behaviour of each component. To accomplish this task, we developed, a web interface for browsing information related to cell cycle genes, proteins and mathematical models. In this framework, we have implemented a pipeline which allows users to deal with the mathematical part of the models, in order to solve, using different variables, the ordinary differential equation systems that describe the biological process. Conclusion This integrated system is freely available in order to support systems biology research on the cell cycle and

Thermodynamic limits set relevant constraints to the soil-plant-atmosphere system and to optimality in terrestrial vegetation

Science.gov (United States)

Kleidon, Axel; Renner, Maik

2016-04-01

The soil-plant-atmosphere system is a complex system that is strongly shaped by interactions between the physical environment and vegetation. This complexity appears to demand equally as complex models to fully capture the dynamics of the coupled system. What we describe here is an alternative approach that is based on thermodynamics and which allows for comparatively simple formulations free of empirical parameters by assuming that the system is so complex that its emergent dynamics are only constrained by the thermodynamics of the system. This approach specifically makes use of the second law of thermodynamics, a fundamental physical law that is typically not being considered in Earth system science. Its relevance to land surface processes is that it fundamentally sets a direction as well as limits to energy conversions and associated rates of mass exchange, but it requires us to formulate land surface processes as thermodynamic processes that are driven by energy conversions. We describe an application of this approach to the surface energy balance partitioning at the diurnal scale. In this application the turbulent heat fluxes of sensible and latent heat are described as the result of a convective heat engine that is driven by solar radiative heating of the surface and that operates at its thermodynamic limit. The predicted fluxes from this approach compare very well to observations at several sites. This suggests that the turbulent exchange fluxes between the surface and the atmosphere operate at their thermodynamic limit, so that thermodynamics imposes a relevant constraint to the land surface-atmosphere system. Yet, thermodynamic limits do not entirely determine the soil-plant-atmosphere system because vegetation affects these limits, for instance by affecting the magnitude of surface heating by absorption of solar radiation in the canopy layer. These effects are likely to make the conditions at the land surface more favorable for photosynthetic activity

Functionally relevant climate variables for arid lands: Aclimatic water deficit approach for modelling desert shrub distributions

Science.gov (United States)

Thomas E. Dilts; Peter J. Weisberg; Camie M. Dencker; Jeanne C. Chambers

2015-01-01

We have three goals. (1) To develop a suite of functionally relevant climate variables for modelling vegetation distribution on arid and semi-arid landscapes of the Great Basin, USA. (2) To compare the predictive power of vegetation distribution models based on mechanistically proximate factors (water deficit variables) and factors that are more mechanistically removed...

Modelling the adoption of automatic milking systems in Noord-Holland

OpenAIRE

Matteo Floridi; Fabio Bartolini; Jack Peerlings; Nico Polman; Davide Viaggi

2013-01-01

Innovation and new technology adoption represent two central elements for the business and industry development process in agriculture. One of the most relevant innovations in dairy farms is the robotisation of the milking process through the adoption of Automatic Milking Systems (AMS). The purpose of this paper is to assess the impact of selected Common Agricultural Policy measures on the adoption of AMS in dairy farms. The model developed is a dynamic farm-household model that is able to si...

Life system modeling and intelligent computing. Pt. II. Proceedings

Energy Technology Data Exchange (ETDEWEB)

Li, Kang; Irwin, George W. (eds.) [Belfast Queen' s Univ. (United Kingdom). School of Electronics, Electrical Engineering and Computer Science; Fei, Minrui; Jia, Li [Shanghai Univ. (China). School of Mechatronical Engineering and Automation

2010-07-01

This book is part II of a two-volume work that contains the refereed proceedings of the International Conference on Life System Modeling and Simulation, LSMS 2010 and the International Conference on Intelligent Computing for Sustainable Energy and Environment, ICSEE 2010, held in Wuxi, China, in September 2010. The 194 revised full papers presented were carefully reviewed and selected from over 880 submissions and recommended for publication by Springer in two volumes of Lecture Notes in Computer Science (LNCS) and one volume of Lecture Notes in Bioinformatics (LNBI). This particular volume of Lecture Notes in Computer Science (LNCS) includes 55 papers covering 7 relevant topics. The 56 papers in this volume are organized in topical sections on advanced evolutionary computing theory and algorithms; advanced neural network and fuzzy system theory and algorithms; modeling and simulation of societies and collective behavior; biomedical signal processing, imaging, and visualization; intelligent computing and control in distributed power generation systems; intelligent methods in power and energy infrastructure development; intelligent modeling, monitoring, and control of complex nonlinear systems. (orig.)

Aerial Measuring System Sensor Modeling

International Nuclear Information System (INIS)

Detwiler, R.S.

2002-01-01

This project deals with the modeling the Aerial Measuring System (AMS) fixed-wing and rotary-wing sensor systems, which are critical U.S. Department of Energy's National Nuclear Security Administration (NNSA) Consequence Management assets. The fixed-wing system is critical in detecting lost or stolen radiography or medical sources, or mixed fission products as from a commercial power plant release at high flying altitudes. The helicopter is typically used at lower altitudes to determine ground contamination, such as in measuring americium from a plutonium ground dispersal during a cleanup. Since the sensitivity of these instruments as a function of altitude is crucial in estimating detection limits of various ground contaminations and necessary count times, a characterization of their sensitivity as a function of altitude and energy is needed. Experimental data at altitude as well as laboratory benchmarks is important to insure that the strong effects of air attenuation are modeled correctly. The modeling presented here is the first attempt at such a characterization of the equipment for flying altitudes. The sodium iodide (NaI) sensors utilized with these systems were characterized using the Monte Carlo N-Particle code (MCNP) developed at Los Alamos National Laboratory. For the fixed wing system, calculations modeled the spectral response for the 3-element NaI detector pod and High-Purity Germanium (HPGe) detector, in the relevant energy range of 50 keV to 3 MeV. NaI detector responses were simulated for both point and distributed surface sources as a function of gamma energy and flying altitude. For point sources, photopeak efficiencies were calculated for a zero radial distance and an offset equal to the altitude. For distributed sources approximating an infinite plane, gross count efficiencies were calculated and normalized to a uniform surface deposition of 1 microCi/m 2 . The helicopter calculations modeled the transport of americium-241 ( 241 Am) as this is

A beamline systems model for Accelerator-Driven Transmutation Technology (ADTT) facilities

Energy Technology Data Exchange (ETDEWEB)

Todd, A.M.M.; Paulson, C.C.; Peacock, M.A. [Grumman Research and Development Center, Princeton, NJ (United States)] [and others

1995-10-01

A beamline systems code, that is being developed for Accelerator-Driven Transmutation Technology (ADTT) facility trade studies, is described. The overall program is a joint Grumman, G.H. Gillespie Associates (GHGA) and Los Alamos National Laboratory effort. The GHGA Accelerator Systems Model (ASM) has been adopted as the framework on which this effort is based. Relevant accelerator and beam transport models from earlier Grumman systems codes are being adapted to this framework. Preliminary physics and engineering models for each ADTT beamline component have been constructed. Examples noted include a Bridge Coupled Drift Tube Linac (BCDTL) and the accelerator thermal system. A decision has been made to confine the ASM framework principally to beamline modeling, while detailed target/blanket, balance-of-plant and facility costing analysis will be performed externally. An interfacing external balance-of-plant and facility costing model, which will permit the performance of iterative facility trade studies, is under separate development. An ABC (Accelerator Based Conversion) example is used to highlight the present models and capabilities.

A beamline systems model for Accelerator-Driven Transmutation Technology (ADTT) facilities

International Nuclear Information System (INIS)

Todd, Alan M. M.; Paulson, C. C.; Peacock, M. A.; Reusch, M. F.

1995-01-01

A beamline systems code, that is being developed for Accelerator-Driven Transmutation Technology (ADTT) facility trade studies, is described. The overall program is a joint Grumman, G. H. Gillespie Associates (GHGA) and Los Alamos National Laboratory effort. The GHGA Accelerator Systems Model (ASM) has been adopted as the framework on which this effort is based. Relevant accelerator and beam transport models from earlier Grumman systems codes are being adapted to this framework. Preliminary physics and engineering models for each ADTT beamline component have been constructed. Examples noted include a Bridge Coupled Drift Tube Linac (BCDTL) and the accelerator thermal system. A decision has been made to confine the ASM framework principally to beamline modeling, while detailed target/blanket, balance-of-plant and facility costing analysis will be performed externally. An interfacing external balance-of-plant and facility costing model, which will permit the performance of iterative facility trade studies, is under separate development. An ABC (Accelerator Based Conversion) example is used to highlight the present models and capabilities

Stem cell therapy for joint problems using the horse as a clinically relevant animal model

DEFF Research Database (Denmark)

Koch, Thomas Gadegaard; Betts, Dean H.

2007-01-01

of experimentally induced lesions. The horse lends itself as a good animal model of spontaneous joint disorders that are clinically relevant to similar human disorders. Equine stem cell and tissue engineering studies may be financially feasible to principal investigators and small biotechnology companies...

The Social Costs of Electricity Generation—Categorising Different Types of Costs and Evaluating Their Respective Relevance

Directory of Open Access Journals (Sweden)

Sascha Samadi

2017-03-01

Full Text Available Various electricity generation technologies using different primary energy sources are available. Many published studies compare the costs of these technologies. However, most of those studies only consider plant-level costs and do not fully take into account additional costs that societies may face in using these technologies. This article reviews the literature on the costs of electricity generation technologies, aiming to determine which types of costs are relevant from a societal point of view when comparing generation technologies. The paper categorises the relevant types of costs, differentiating between plant-level, system and external costs as the main categories. It discusses the relevance of each type of cost for each generation technology. The findings suggest that several low-carbon electricity generation technologies exhibit lower social costs per kWh than the currently dominant technologies using fossil fuels. More generally, the findings emphasise the importance of taking not only plant-level costs, but also system and external costs, into account when comparing electricity generation technologies from a societal point of view. The article intends to inform both policymakers and energy system modellers, the latter who may strive to include all relevant types of costs in their models.

Relevant Subspace Clustering

DEFF Research Database (Denmark)

Müller, Emmanuel; Assent, Ira; Günnemann, Stephan

2009-01-01

Subspace clustering aims at detecting clusters in any subspace projection of a high dimensional space. As the number of possible subspace projections is exponential in the number of dimensions, the result is often tremendously large. Recent approaches fail to reduce results to relevant subspace...... clusters. Their results are typically highly redundant, i.e. many clusters are detected multiple times in several projections. In this work, we propose a novel model for relevant subspace clustering (RESCU). We present a global optimization which detects the most interesting non-redundant subspace clusters...... achieves top clustering quality while competing approaches show greatly varying performance....

Looking for a relevant potential evapotranspiration model at the watershed scale

Science.gov (United States)

Oudin, L.; Hervieu, F.; Michel, C.; Perrin, C.; Anctil, F.; Andréassian, V.

2003-04-01

In this paper, we try to identify the most relevant approach to calculate Potential Evapotranspiration (PET) for use in a daily watershed model, to try to bring an answer to the following question: "how can we use commonly available atmospheric parameters to represent the evaporative demand at the catchment scale?". Hydrologists generally see the Penman model as the ideal model regarding to its good adequacy with lysimeter measurements and its physically-based formulation. However, in real-world engineering situations, where meteorological stations are scarce, hydrologists are often constrained to use other PET formulae with less data requirements or/and long-term average of PET values (the rationale being that PET is an inherently conservative variable). We chose to test 28 commonly used PET models coupled with 4 different daily watershed models. For each test, we compare both PET input options: actual data and long-term average data. The comparison is made in terms of streamflow simulation efficiency, over a large sample of 308 watersheds. The watersheds are located in France, Australia and the United States of America and represent varied climates. Strikingly, we find no systematic improvements of the watershed model efficiencies when using actual PET series instead of long-term averages. This suggests either that watershed models may not conveniently use the climatic information contained in PET values or that formulae are only awkward indicators of the real PET which watershed models need.

Toward a New Generation of Agricultural System Data, Models, and Knowledge Products: State of Agricultural Systems Science

Science.gov (United States)

Jones, James W.; Antle, John M.; Basso, Bruno; Boote, Kenneth J.; Conant, Richard T.; Foster, Ian; Godfray, H. Charles J.; Herrero, Mario; Howitt, Richard E.; Janssen, Sander;

AMOC decadal variability in Earth system models: Mechanisms and climate impacts

Energy Technology Data Exchange (ETDEWEB)

Fedorov, Alexey [Yale Univ., New Haven, CT (United States)

2017-09-06

This is the final report for the project titled "AMOC decadal variability in Earth system models: Mechanisms and climate impacts". The central goal of this one-year research project was to understand the mechanisms of decadal and multi-decadal variability of the Atlantic Meridional Overturning Circulation (AMOC) within a hierarchy of climate models ranging from realistic ocean GCMs to Earth system models. The AMOC is a key element of ocean circulation responsible for oceanic transport of heat from low to high latitudes and controlling, to a large extent, climate variations in the North Atlantic. The questions of the AMOC stability, variability and predictability, directly relevant to the questions of climate predictability, were at the center of the research work.

The SOA/VOC/NOx system: an explicit model of secondary organic aerosol formation

Directory of Open Access Journals (Sweden)

S. Madronich

2007-11-01

Full Text Available Our current understanding of secondary organic aerosol (SOA formation is limited by our knowledge of gaseous secondary organics involved in gas/particle partitioning. The objective of this study is to explore (i the potential for products of multiple oxidation steps contributing to SOA, and (ii the evolution of the SOA/VOC/NOx system. We developed an explicit model based on the coupling of detailed gas-phase oxidation schemes with a thermodynamic condensation module. Such a model allows prediction of SOA mass and speciation on the basis of first principles. The SOA/VOC/NOx system is studied for the oxidation of 1-octene under atmospherically relevant concentrations. In this study, gaseous oxidation of octene is simulated to lead to SOA formation. Contributors to SOA formation are shown to be formed via multiple oxidation steps of the parent hydrocarbon. The behaviour of the SOA/VOC/NOx system simulated using the explicit model agrees with general tendencies observed during laboratory chamber experiments. This explicit modelling of SOA formation appears as a useful exploratory tool to (i support interpretations of SOA formation observed in laboratory chamber experiments, (ii give some insights on SOA formation under atmospherically relevant conditions and (iii investigate implications for the regional/global lifetimes of the SOA.

Uranium(VI) speciation: modelling, uncertainty and relevance to bioavailability models. Application to uranium uptake by the gills of a freshwater bivalve

International Nuclear Information System (INIS)

Denison, F.H.

2004-07-01

The effects of varying solution composition on the interactions between uranium(VI) and excised gills of the freshwater bivalve Corbicula fluminea have been investigated in well defined solution media. A significant reduction in the uptake of uranium was observed on increasing the concentrations of the uranium complexing ligands citrate and carbonate. Saturation kinetics as a function of uranium concentration at a pH value of 5.0 were observed, indicating that the uptake of uranium is a facilitated process, probably involving one or several trans-membrane transport systems. A relatively small change in the uptake of uranium was found as a function of pH (factor of ca. 2), despite the extremely large changes to the solution speciation of uranium within the range of pH investigated (5.0 - 7.5). A comprehensive review of the thermodynamic data relevant to the solution composition domain employed for this study was performed. Estimates of the uncertainties for the formation constants of aqueous uranium(VI) species were integrated into a thermodynamic database. A computer program was written to predict the equilibrium distribution of uranium(VI) in simple aqueous systems, using thermodynamic parameter mean-values. The program was extended to perform Monte Carlo and Quasi Monte Carlo uncertainty analyses, incorporating the thermodynamic database uncertainty estimates, to quantitatively predict the uncertainties inherent in predicting the solution speciation of uranium. The use of thermodynamic equilibrium modelling as a tool for interpreting the bioavailability of uranium(VI) was investigated. Observed uranium(VI) uptake behaviour was interpreted as a function of the predicted changes to the solution speciation of uranium. Different steady-state or pre-equilibrium approaches to modelling uranium uptake were tested. Alternative modelling approaches were also tested, considering the potential changes to membrane transport system activity or sorption characteristics on

Notions of similarity for systems biology models.

Science.gov (United States)

Henkel, Ron; Hoehndorf, Robert; Kacprowski, Tim; Knüpfer, Christian; Liebermeister, Wolfram; Waltemath, Dagmar

2018-01-01

Systems biology models are rapidly increasing in complexity, size and numbers. When building large models, researchers rely on software tools for the retrieval, comparison, combination and merging of models, as well as for version control. These tools need to be able to quantify the differences and similarities between computational models. However, depending on the specific application, the notion of 'similarity' may greatly vary. A general notion of model similarity, applicable to various types of models, is still missing. Here we survey existing methods for the comparison of models, introduce quantitative measures for model similarity, and discuss potential applications of combined similarity measures. To frame model comparison as a general problem, we describe a theoretical approach to defining and computing similarities based on a combination of different model aspects. The six aspects that we define as potentially relevant for similarity are underlying encoding, references to biological entities, quantitative behaviour, qualitative behaviour, mathematical equations and parameters and network structure. We argue that future similarity measures will benefit from combining these model aspects in flexible, problem-specific ways to mimic users' intuition about model similarity, and to support complex model searches in databases. © The Author 2016. Published by Oxford University Press.

Crack propagation rate modelling for 316SS exposed to PWR-relevant conditions

International Nuclear Information System (INIS)

Vankeerberghen, M.; Weyns, G.; Gavrilov, S.; Martens, B.; Deconinck, J.

2009-01-01

The crack propagation rate of Type 316 stainless steel in boric acid-lithium hydroxide solutions under PWR-relevant conditions was modelled. A film rupture/dissolution/repassivation mechanism is assumed and extended to cold worked materials by including a stress-dependent bare metal dissolution current density. The chemical and electrochemical conditions within the crack are calculated by finite element calculations, an analytical expression is used for the crack-tip strain rate and the crack-tip stress is assumed equal to 2.5 times the yield stress (plane-strain). First the model was calibrated against a literature published data set. Afterwards, the influence of various variables - dissolved hydrogen, boric acid and lithium hydroxide content, stress intensity, crack length, temperature, flow rate - was studied. Finally, other published crack growth rate tests were modelled and the calculated crack growth rates were found to be in reasonable agreement with the reported ones

A Critical Review of the Integration of Geographic Information System and Building Information Modelling at the Data Level

Directory of Open Access Journals (Sweden)

Junxiang Zhu

2018-02-01

Full Text Available The benefits brought by the integration of Building Information Modelling (BIM and Geographic Information Systems (GIS are being proved by more and more research. The integration of the two systems is difficult for many reasons. Among them, data incompatibility is the most significant, as BIM and GIS data are created, managed, analyzed, stored, and visualized in different ways in terms of coordinate systems, scope of interest, and data structures. The objective of this paper is to review the relevant research papers to (1 identify the most relevant data models used in BIM/GIS integration and understand their advantages and disadvantages; (2 consider the possibility of other data models that are available for data level integration; and (3 provide direction on the future of BIM/GIS data integration.

Review of relevant studies of isolated systems

DEFF Research Database (Denmark)

Hansen, L.H.; Lundsager, P.

2001-01-01

The report presents the results of a review of studies relating to integration of wind energy in isolated power supply systems, based on a systematic literature survey. The purpose of the study is to develop a methodology consisting of a set of guidelinesfor wind energy projects in isolated energy...... systems and a set of tools and models that are operational on an engineering level. The review is based on a literature search in the ETDE Energy Database with a main search covering the period 7/88 to 6/97 andsupplemented by partial update periods. A few newer references have been included in the review...... have been organised according to the following keywords: methods & guides, economics, concept ofapplication, system solutions, case studies, financial programmes, dedicated software tools. None of the found references presents methods or tools that contradict the philosophy of Risø's methodology...

From Heavy-Ion Collisions to Compact Stars: Equation of State and Relevance of the System Size

Directory of Open Access Journals (Sweden)

Sylvain Mogliacci

2018-01-01

Full Text Available In this article, we start by presenting state-of-the-art methods allowing us to compute moments related to the globally conserved baryon number, by means of first principle resummed perturbative frameworks. We focus on such quantities for they convey important properties of the finite temperature and density equation of state, being particularly sensitive to changes in the degrees of freedom across the quark-hadron phase transition. We thus present various number susceptibilities along with the corresponding results as obtained by lattice quantum chromodynamics collaborations, and comment on their comparison. Next, omitting the importance of coupling corrections and considering a zero-density toy model for the sake of argument, we focus on corrections due to the small size of heavy-ion collision systems, by means of spatial compactifications. Briefly motivating the relevance of finite size effects in heavy-ion physics, in opposition to the compact star physics, we present a few preliminary thermodynamic results together with the speed of sound for certain finite size relativistic quantum systems at very high temperature.

Evidence for the triadic model of adolescent brain development: Cognitive load and task-relevance of emotion differentially affect adolescents and adults.

Science.gov (United States)

Mueller, Sven C; Cromheeke, Sofie; Siugzdaite, Roma; Nicolas Boehler, C

2017-08-01

In adults, cognitive control is supported by several brain regions including the limbic system and the dorsolateral prefrontal cortex (dlPFC) when processing emotional information. However, in adolescents, some theories hypothesize a neurobiological imbalance proposing heightened sensitivity to affective material in the amygdala and striatum within a cognitive control context. Yet, direct neurobiological evidence is scarce. Twenty-four adolescents (12-16) and 28 adults (25-35) completed an emotional n-back working memory task in response to happy, angry, and neutral faces during fMRI. Importantly, participants either paid attention to the emotion (task-relevant condition) or judged the gender (task-irrelevant condition). Behaviorally, for both groups, when happy faces were task-relevant, performance improved relative to when they were task-irrelevant, while performance decrements were seen for angry faces. In the dlPFC, angry faces elicited more activation in adults during low relative to high cognitive load (2-back vs. 0-back). By contrast, happy faces elicited more activation in the amygdala in adolescents when they were task-relevant. Happy faces also generally increased nucleus accumbens activity (regardless of relevance) in adolescents relative to adults. Together, the findings are consistent with neurobiological models of adolescent brain development and identify neurodevelopmental differences in cognitive control emotion interactions. Copyright © 2017 The Authors. Published by Elsevier Ltd.. All rights reserved.

Solar system tests of scalar field models with an exponential potential

International Nuclear Information System (INIS)

Paramos, J.; Bertolami, O.

2008-01-01

We consider a scenario where the dynamics of a scalar field is ruled by an exponential potential, such as those arising from some quintessence-type models, and aim at obtaining phenomenological manifestations of this entity within our Solar System. To do so, we assume a perturbative regime, derive the perturbed Schwarzschild metric, and extract the relevant post-Newtonian parameters.

Towards a barrier height benchmark set for biologically relevant systems.

Science.gov (United States)

Kromann, Jimmy C; Christensen, Anders S; Cui, Qiang; Jensen, Jan H

2016-01-01

We have collected computed barrier heights and reaction energies (and associated model structures) for five enzymes from studies published by Himo and co-workers. Using this data, obtained at the B3LYP/6- 311+G(2d,2p)[LANL2DZ]//B3LYP/6-31G(d,p) level of theory, we then benchmark PM6, PM7, PM7-TS, and DFTB3 and discuss the influence of system size, bulk solvation, and geometry re-optimization on the error. The mean absolute differences (MADs) observed for these five enzyme model systems are similar to those observed for PM6 and PM7 for smaller systems (10-15 kcal/mol), while DFTB results in a MAD that is significantly lower (6 kcal/mol). The MADs for PMx and DFTB3 are each dominated by large errors for a single system and if the system is disregarded the MADs fall to 4-5 kcal/mol. Overall, results for the condensed phase are neither more or less accurate relative to B3LYP than those in the gas phase. With the exception of PM7-TS, the MAD for small and large structural models are very similar, with a maximum deviation of 3 kcal/mol for PM6. Geometry optimization with PM6 shows that for one system this method predicts a different mechanism compared to B3LYP/6-31G(d,p). For the remaining systems, geometry optimization of the large structural model increases the MAD relative to single points, by 2.5 and 1.8 kcal/mol for barriers and reaction energies. For the small structural model, the corresponding MADs decrease by 0.4 and 1.2 kcal/mol, respectively. However, despite these small changes, significant changes in the structures are observed for some systems, such as proton transfer and hydrogen bonding rearrangements. The paper represents the first step in the process of creating a benchmark set of barriers computed for systems that are relatively large and representative of enzymatic reactions, a considerable challenge for any one research group but possible through a concerted effort by the community. We end by outlining steps needed to expand and improve the data set

Energy Storage in Power System Operation: The Power Nodes Modeling Framework

DEFF Research Database (Denmark)

Heussen, Kai; Koch, Stephan; Ulbig, Andreas

2010-01-01

for designing operation strategies for power systems based on ubiquitous energy storage, for example to buer non-dispatchable generation, as well as for the evaluation of the operational performance in terms of energy eciency, reliability and cost. After introducing the modeling approach and a categorization......In this paper, a novel concept for the description of energy storage in power systems with dispatchable and non-dispatchable generators and loads is presented. It is based on a system-perspective consideration of energy storage, generation and consumption. This means that grid-relevant aspects...

Decision-relevant evaluation of climate models: A case study of chill hours in California

Science.gov (United States)

Jagannathan, K. A.; Jones, A. D.; Kerr, A. C.

2017-12-01

The past decade has seen a proliferation of different climate datasets with over 60 climate models currently in use. Comparative evaluation and validation of models can assist practitioners chose the most appropriate models for adaptation planning. However, such assessments are usually conducted for `climate metrics' such as seasonal temperature, while sectoral decisions are often based on `decision-relevant outcome metrics' such as growing degree days or chill hours. Since climate models predict different metrics with varying skill, the goal of this research is to conduct a bottom-up evaluation of model skill for `outcome-based' metrics. Using chill hours (number of hours in winter months where temperature is lesser than 45 deg F) in Fresno, CA as a case, we assess how well different GCMs predict the historical mean and slope of chill hours, and whether and to what extent projections differ based on model selection. We then compare our results with other climate-based evaluations of the region, to identify similarities and differences. For the model skill evaluation, historically observed chill hours were compared with simulations from 27 GCMs (and multiple ensembles). Model skill scores were generated based on a statistical hypothesis test of the comparative assessment. Future projections from RCP 8.5 runs were evaluated, and a simple bias correction was also conducted. Our analysis indicates that model skill in predicting chill hour slope is dependent on its skill in predicting mean chill hours, which results from the non-linear nature of the chill metric. However, there was no clear relationship between the models that performed well for the chill hour metric and those that performed well in other temperature-based evaluations (such winter minimum temperature or diurnal temperature range). Further, contrary to conclusions from other studies, we also found that the multi-model mean or large ensemble mean results may not always be most appropriate for this

Discrete modelling of drapery systems

Science.gov (United States)

Thoeni, Klaus; Giacomini, Anna

2016-04-01

Drapery systems are an efficient and cost-effective measure in preventing and controlling rockfall hazards on rock slopes. The simplest form consists of a row of ground anchors along the top of the slope connected to a horizontal support cable from which a wire mesh is suspended down the face of the slope. Such systems are generally referred to as simple or unsecured draperies (Badger and Duffy 2012). Variations such as secured draperies, where a pattern of ground anchors is incorporated within the field of the mesh, and hybrid systems, where the upper part of an unsecured drapery is elevated to intercept rockfalls originating upslope of the installation, are becoming more and more popular. This work presents a discrete element framework for simulation of unsecured drapery systems and its variations. The numerical model is based on the classical discrete element method (DEM) and implemented into the open-source framework YADE (Šmilauer et al., 2010). The model takes all relevant interactions between block, drapery and slope into account (Thoeni et al., 2014) and was calibrated and validated based on full-scale experiments (Giacomini et al., 2012).The block is modelled as a rigid clump made of spherical particles which allows any shape to be approximated. The drapery is represented by a set of spherical particle with remote interactions. The behaviour of the remote interactions is governed by the constitutive behaviour of the wire and generally corresponds to a piecewise linear stress-strain relation (Thoeni et al., 2013). The same concept is used to model wire ropes. The rock slope is represented by rigid triangular elements where material properties (e.g., normal coefficient of restitution, friction angle) are assigned to each triangle. The capabilities of the developed model to simulate drapery systems and estimate the residual hazard involved with such systems is shown. References Badger, T.C., Duffy, J.D. (2012) Drapery systems. In: Turner, A.K., Schuster R

Models with Men and Women: Representing Gender in Dynamic Modeling of Social Systems.

Science.gov (United States)

Palmer, Erika; Wilson, Benedicte

2018-04-01

Dynamic engineering models have yet to be evaluated in the context of feminist engineering ethics. Decision-making concerning gender in dynamic modeling design is a gender and ethical issue that is important to address regardless of the system in which the dynamic modeling is applied. There are many dynamic modeling tools that operationally include the female population, however, there is an important distinction between females and women; it is the difference between biological sex and the social construct of gender, which is fluid and changes over time and geography. The ethical oversight in failing to represent or misrepresenting gender in model design when it is relevant to the model purpose can have implications for model validity and policy model development. This paper highlights this gender issue in the context of feminist engineering ethics using a dynamic population model. Women are often represented in this type of model only in their biological capacity, while lacking their gender identity. This illustrative example also highlights how language, including the naming of variables and communication with decision-makers, plays a role in this gender issue.

Thermal-Hydraulic Experiments and Modelling for Advanced Nuclear Reactor Systems

International Nuclear Information System (INIS)

Song, C. H.; Baek, W. P.; Chung, M. K.

2007-06-01

The objectives of the project are to study thermal hydraulic characteristics of advanced nuclear reactor system for evaluating key thermal-hydraulic phenomena relevant to new safety concepts. To meet the research goal, several thermal hydraulic experiments were performed and related thermal hydraulic models were developed with the experimental data which were produced through the thermal hydraulic experiments. The Followings are main research topics: - Multi-dimensional Phenomena in a Reactor Vessel Downcomer - Condensation-induced Thermal Mixing in a Pool - Development of Thermal-Hydraulic Models for Two-Phase Flow - Construction of T-H Data Base

Solar PV Manufacturing Cost Model Group: Installed Solar PV System Prices (Presentation)

Energy Technology Data Exchange (ETDEWEB)

Goodrich, A. C.; Woodhouse, M.; James, T.

2011-02-01

EERE's Solar Energy Technologies Program is charged with leading the Secretary's SunShot Initiative to reduce the cost of electricity from solar by 75% to be cost competitive with conventional energy sources without subsidy by the end of the decade. As part of this Initiative, the program has funded the National Renewable Energy Laboratory (NREL) to develop module manufacturing and solar PV system installation cost models to ensure that the program's cost reduction targets are carefully aligned with current and near term industry costs. The NREL cost analysis team has leveraged the laboratories' extensive experience in the areas of project finance and deployment, as well as industry partnerships, to develop cost models that mirror the project cost analysis tools used by project managers at leading U.S. installers. The cost models are constructed through a "bottoms-up" assessment of each major cost element, beginning with the system's bill of materials, labor requirements (type and hours) by component, site-specific charges, and soft costs. In addition to the relevant engineering, procurement, and construction costs, the models also consider all relevant costs to an installer, including labor burdens and overhead rates, supply chain costs, and overhead and materials inventory costs, and assume market-specific profits.

Modelling and control of neutron and synchrotron beamline positioning systems

Energy Technology Data Exchange (ETDEWEB)

Nneji, S.O., E-mail: Stephen.nneji@open.ac.uk [The Open University, Materials Engineering, Walton Hall, Milton Keynes, Buckinghamshire MK7 6AA (United Kingdom); Science and Technology Facility Council , Rutherford Appleton Laboratory, Harwell Science and Innovation Campus, Didcot, OX110QX Oxfordshire (United Kingdom); Zhang, S.Y.; Kabra, S. [Science and Technology Facility Council , Rutherford Appleton Laboratory, Harwell Science and Innovation Campus, Didcot, OX110QX Oxfordshire (United Kingdom); Moat, R.J.; James, J.A. [The Open University, Materials Engineering, Walton Hall, Milton Keynes, Buckinghamshire MK7 6AA (United Kingdom)

2016-03-21

Measurement of residual stress using neutron or synchrotron diffraction relies on the accurate alignment of the sample in relation to the gauge volume of the instrument. Automatic sample alignment can be achieved using kinematic models of the positioning system provided the relevant kinematic parameters are known, or can be determined, to a suitable accuracy. In this paper, the use of techniques from robotic calibration theory to generate kinematic models of both off-the-shelf and custom-built positioning systems is demonstrated. The approach is illustrated using a positioning system in use on the ENGIN-X instrument at the UK's ISIS pulsed neutron source comprising a traditional XYZΩ table augmented with a triple axis manipulator. Accuracies better than 100 microns were achieved for this compound system. Discussed here in terms of sample positioning systems these methods are entirely applicable to other moving instrument components such as beam shaping jaws and detectors.

Life system modeling and intelligent computing. Pt. I. Proceedings

Energy Technology Data Exchange (ETDEWEB)

Li, Kang; Irwin, George W. (eds.) [Belfast Queen' s Univ. (United Kingdom). School of Electronics, Electrical Engineering and Computer Science; Fei, Minrui; Jia, Li [Shanghai Univ. (China). School of Mechatronical Engineering and Automation

2010-07-01

This book is part I of a two-volume work that contains the refereed proceedings of the International Conference on Life System Modeling and Simulation, LSMS 2010 and the International Conference on Intelligent Computing for Sustainable Energy and Environment, ICSEE 2010, held in Wuxi, China, in September 2010. The 194 revised full papers presented were carefully reviewed and selected from over 880 submissions and recommended for publication by Springer in two volumes of Lecture Notes in Computer Science (LNCS) and one volume of Lecture Notes in Bioinformatics (LNBI). This particular volume of Lecture Notes in Computer Science (LNCS) includes 55 papers covering 7 relevant topics. The 55 papers in this volume are organized in topical sections on intelligent modeling, monitoring, and control of complex nonlinear systems; autonomy-oriented computing and intelligent agents; advanced theory and methodology in fuzzy systems and soft computing; computational intelligence in utilization of clean and renewable energy resources; intelligent modeling, control and supervision for energy saving and pollution reduction; intelligent methods in developing vehicles, engines and equipments; computational methods and intelligence in modeling genetic and biochemical networks and regulation. (orig.)

relevance of information warfare models to critical infrastructure

African Journals Online (AJOL)

ismith

Critical infrastructure models, strategies and policies should take information ... gain an advantage over a competitor or adversary through the use of one's own .... digital communications system, where the vehicles are analogous to bits or packets, ..... performance degraded, causing an increase in traffic finding a new route.

Are invertebrates relevant models in ageing research?

DEFF Research Database (Denmark)

Erdogan, Cihan Suleyman; Hansen, Benni Winding; Vang, Ole

2016-01-01

is an evolutionary conserved key protein kinase in the TOR pathway that regulates growth, proliferation and cell metabolism in response to nutrients, growth factors and stress. Comparing the ageing process in invertebrate model organisms with relatively short lifespan with mammals provides valuable information about...... the molecular mechanisms underlying the ageing process faster than mammal systems. Inhibition of the TOR pathway activity via either genetic manipulation or rapamycin increases lifespan profoundly in most invertebrate model organisms. This contribution will review the recent findings in invertebrates concerning...... the TOR pathway and effects of TOR inhibition by rapamycin on lifespan. Besides some contradictory results, the majority points out that rapamycin induces longevity. This suggests that administration of rapamycin in invertebrates is a promising tool for pursuing the scientific puzzle of lifespan...

Investigation of droplet nucleation in CCS relevant systems - design and testing of the expansion chamber

Science.gov (United States)

Čenský, Miroslav; Hrubý, Jan; Vinš, Václav; Hykl, Jiří; Šmíd, Bohuslav

2018-06-01

A unique in-house designed experimental apparatus for investigation of nucleation of droplets in CCS relevant systems is being developed by the present team. The apparatus allows simulating various processes relevant to CCS technologies. Gaseous mixtures with CO2 are prepared in a Mixture Preparation Device (MPD) based on accurate adjustment of flow rates of individual components [EPJ Web of Conferences 143, 02140 (2017)]. The mixture then flows into an expansion chamber, where it undergoes a rapid adiabatic expansion. As a consequence of adiabatic cooling, the mixture becomes supersaturated and nucleation and simultaneous growth of droplets occurs. In this study, we describe the design and testing of the expansion part of the experimental setup. The rapid expansion was realized using two valve systems, one for low pressures (up to 0.7 MPa) and the other for high pressures (up to 10 MPa). A challenge for a proper design of the expansion system is avoiding acoustic oscillations. These can occur either in the mode of Helmholtz resonator, where the compressible gas in the chamber acts as a spring and the rapidly moving gas in the valve system as a mass, or in the "flute" mode, where acoustic waves are generated in a long outlet tubing.

Relevance of the ICRP biokinetic model for dietary organically bound tritium

International Nuclear Information System (INIS)

Trivedi, A.

1999-10-01

Ingested dietary tritium can participate in metabolic processes, and become synthesized into organically bound tritium in the tissues and organs. The distribution and retention of the organically bound tritium throughout the body are much different than tritium in the body water. The International Commission on Radiological Protection (ICRP) Publication 56 (1989) has a biokinetic model to calculate dose from the ingestion of organically bound dietary tritium. The model predicts that the dose from the ingestion of organically bound dietary tritium is about 2.3 times higher than from the ingestion of the same activity of tritiated water. Under steady-state conditions, the calculated dose rate (using the first principle approach) from the ingestion of dietary organically bound tritium can be twice that from the ingestion of tritiated water. For an adult, the upper-bound dose estimate for the ingestion of dietary organically bound tritium is estimated to be close to 2.3 times higher than that of tritiated water. Therefore, given the uncertainty in the dose calculation with respect to the actual relevant dose, the ICRP biokinetic model for organically bound tritium is sufficient for dosimetry for adults. (author)

Relevance in the science classroom: A multidimensional analysis

Science.gov (United States)

Hartwell, Matthew F.

While perceived relevance is considered a fundamental component of adaptive learning, the experience of relevance and its conceptual definition have not been well described. The mixed-methods research presented in this dissertation aimed to clarify the conceptual meaning of relevance by focusing on its phenomenological experience from the students' perspective. Following a critical literature review, I propose an identity-based model of perceived relevance that includes three components: a contextual target, an identity target, and a connection type, or lens. An empirical investigation of this model that consisted of two general phases was implemented in four 9th grade-biology classrooms. Participants in Phase 1 (N = 118) completed a series of four open-ended writing activities focused on eliciting perceived personal connections to academic content. Exploratory qualitative content analysis of a 25% random sample of the student responses was used to identify the main meaning-units of the proposed model as well as different dimensions of student relevance perceptions. These meaning-units and dimensions provided the basis for the construction of a conceptual mapping sentence capturing students' perceived relevance, which was then applied in a confirmatory analysis to all other student responses. Participants in Phase 2 (N = 139) completed a closed survey designed based on the mapping sentence to assess their perceived relevance of a biology unit. The survey also included scales assessing other domain-level motivational processes. Exploratory factor analysis and non-metric multidimensional scaling indicated a coherent conceptual structure, which included a primary interpretive relevance dimension. Comparison of the conceptual structure across various groups (randomly-split sample, gender, academic level, domain-general motivational profiles) provided support for its ubiquity and insight into variation in the experience of perceived relevance among students of different

A model based system for the interpretation of MR human brain scans

International Nuclear Information System (INIS)

Kapouleas, I.; Kulikowski, C.A.

1988-01-01

This paper describes a prototype system for identifying and characterizing Multiple Scleroris (MS) lesions in the brain from magnetic resonance (MR) images. The system is designed to obtain an initial segmentation of each cross-sectional image with low level vision methods, and then derive successive refinements of image subregions through a model-driven approach that correlates relevant information from T1 and T2 images and 3-D information from complementary cross-sections when necessary. The system uses a b-spline surface model of the brain that matches the characteristics of the individual's brain. The normal internal structures of the brain are then scaled proportionately before carrying out the successive refinement operations for the detection of the MS lesions. The low level vision and the solid modeling components of the system have been successfully tested on several hundred images from a number of MR patient studies. The first steps of model fitting have been implemented and show promising results

Aerosol-Radiation-Cloud Interactions in the South-East Atlantic: Model-Relevant Observations and the Beneficiary Modeling Efforts in the Realm of the EVS-2 Project ORACLES

Science.gov (United States)

Redemann, Jens

2018-01-01

Globally, aerosols remain a major contributor to uncertainties in assessments of anthropogenically-induced changes to the Earth climate system, despite concerted efforts using satellite and suborbital observations and increasingly sophisticated models. The quantification of direct and indirect aerosol radiative effects, as well as cloud adjustments thereto, even at regional scales, continues to elude our capabilities. Some of our limitations are due to insufficient sampling and accuracy of the relevant observables, under an appropriate range of conditions to provide useful constraints for modeling efforts at various climate scales. In this talk, I will describe (1) the efforts of our group at NASA Ames to develop new airborne instrumentation to address some of the data insufficiencies mentioned above; (2) the efforts by the EVS-2 ORACLES project to address aerosol-cloud-climate interactions in the SE Atlantic and (3) time permitting, recent results from a synergistic use of A-Train aerosol data to test climate model simulations of present-day direct radiative effects in some of the AEROCOM phase II global climate models.

Models of Stress in Nonhuman Primates and Their Relevance for Human Psychopathology and Endocrine Dysfunction

Science.gov (United States)

Meyer, Jerrold S.; Hamel, Amanda F.

2014-01-01

Stressful life events have been linked to the onset of severe psychopathology and endocrine dysfunction in many patients. Moreover, vulnerability to the later development of such disorders can be increased by stress or adversity during development (e.g., childhood neglect, abuse, or trauma). This review discusses the methodological features and results of various models of stress in nonhuman primates in the context of their potential relevance for human psychopathology and endocrine dysfunction, particularly mood disorders and dysregulation of the hypothalamic-pituitary-adrenocortical (HPA) system. Such models have typically examined the effects of stress on the animals' behavior, endocrine function (primarily the HPA and hypothalamic-pituitary-gonadal systems), and, in some cases, immune status. Manipulations such as relocation and/or removal of an animal from its current social group or, alternatively, formation of a new social group can have adverse effects on all of these outcome measures that may be either transient or more persistent depending on the species, sex, and other experimental conditions. Social primates may also experience significant stress associated with their rank in the group's dominance hierarchy. Finally, stress during prenatal development or during the early postnatal period may have long-lasting neurobiological and endocrine effects that manifest in an altered ability to cope behaviorally and physiologically with later challenges. Whereas early exposure to severe stress usually results in deficient coping abilities, certain kinds of milder stressors can promote subsequent resilience in the animal. We conclude that studies of stress in nonhuman primates can model many features of stress exposure in human populations and that such studies can play a valuable role in helping to elucidate the mechanisms underlying the role of stress in human psychopathology and endocrine dysfunction. PMID:25225311

Models of stress in nonhuman primates and their relevance for human psychopathology and endocrine dysfunction.

Science.gov (United States)

Meyer, Jerrold S; Hamel, Amanda F

2014-01-01

Stressful life events have been linked to the onset of severe psychopathology and endocrine dysfunction in many patients. Moreover, vulnerability to the later development of such disorders can be increased by stress or adversity during development (e.g., childhood neglect, abuse, or trauma). This review discusses the methodological features and results of various models of stress in nonhuman primates in the context of their potential relevance for human psychopathology and endocrine dysfunction, particularly mood disorders and dysregulation of the hypothalamic-pituitary-adrenocortical (HPA) system. Such models have typically examined the effects of stress on the animals' behavior, endocrine function (primarily the HPA and hypothalamic-pituitary-gonadal systems), and, in some cases, immune status. Manipulations such as relocation and/or removal of an animal from its current social group or, alternatively, formation of a new social group can have adverse effects on all of these outcome measures that may be either transient or more persistent depending on the species, sex, and other experimental conditions. Social primates may also experience significant stress associated with their rank in the group's dominance hierarchy. Finally, stress during prenatal development or during the early postnatal period may have long-lasting neurobiological and endocrine effects that manifest in an altered ability to cope behaviorally and physiologically with later challenges. Whereas early exposure to severe stress usually results in deficient coping abilities, certain kinds of milder stressors can promote subsequent resilience in the animal. We conclude that studies of stress in nonhuman primates can model many features of stress exposure in human populations and that such studies can play a valuable role in helping to elucidate the mechanisms underlying the role of stress in human psychopathology and endocrine dysfunction. © The Author 2014. Published by Oxford University Press on

Modeling reliability measurement of interface on information system: Towards the forensic of rules

Science.gov (United States)

Nasution, M. K. M.; Sitompul, Darwin; Harahap, Marwan

2018-02-01

Today almost all machines depend on the software. As a software and hardware system depends also on the rules that are the procedures for its use. If the procedure or program can be reliably characterized by involving the concept of graph, logic, and probability, then regulatory strength can also be measured accordingly. Therefore, this paper initiates an enumeration model to measure the reliability of interfaces based on the case of information systems supported by the rules of use by the relevant agencies. An enumeration model is obtained based on software reliability calculation.

Towards a barrier height benchmark set for biologically relevant systems

Directory of Open Access Journals (Sweden)

Jimmy C. Kromann

2016-05-01

Full Text Available We have collected computed barrier heights and reaction energies (and associated model structures for five enzymes from studies published by Himo and co-workers. Using this data, obtained at the B3LYP/6- 311+G(2d,2p[LANL2DZ]//B3LYP/6-31G(d,p level of theory, we then benchmark PM6, PM7, PM7-TS, and DFTB3 and discuss the influence of system size, bulk solvation, and geometry re-optimization on the error. The mean absolute differences (MADs observed for these five enzyme model systems are similar to those observed for PM6 and PM7 for smaller systems (10–15 kcal/mol, while DFTB results in a MAD that is significantly lower (6 kcal/mol. The MADs for PMx and DFTB3 are each dominated by large errors for a single system and if the system is disregarded the MADs fall to 4–5 kcal/mol. Overall, results for the condensed phase are neither more or less accurate relative to B3LYP than those in the gas phase. With the exception of PM7-TS, the MAD for small and large structural models are very similar, with a maximum deviation of 3 kcal/mol for PM6. Geometry optimization with PM6 shows that for one system this method predicts a different mechanism compared to B3LYP/6-31G(d,p. For the remaining systems, geometry optimization of the large structural model increases the MAD relative to single points, by 2.5 and 1.8 kcal/mol for barriers and reaction energies. For the small structural model, the corresponding MADs decrease by 0.4 and 1.2 kcal/mol, respectively. However, despite these small changes, significant changes in the structures are observed for some systems, such as proton transfer and hydrogen bonding rearrangements. The paper represents the first step in the process of creating a benchmark set of barriers computed for systems that are relatively large and representative of enzymatic reactions, a considerable challenge for any one research group but possible through a concerted effort by the community. We end by outlining steps needed to expand and

Modelling small-angle scattering data from complex protein-lipid systems

DEFF Research Database (Denmark)

Kynde, Søren Andreas Røssell

This thesis consists of two parts. The rst part is divided into five chapters. Chapter 1 gives a general introduction to the bio-molecular systems that have been studied. These are membrane proteins and their lipid environments in the form of phospholipid nanodiscs. Membrane proteins...... the techniques very well suited for the study of the nanodisc system. Chapter 3 explains two different modelling approaches that can be used in the analysis of small-angle scattering data from lipid-protein complexes. These are the continuous approach where the system of interest is modelled as a few regular...... combine the bene ts of each of the methods and give unique structural information about relevant bio-molecular complexes in solution. Chapter 4 describes the work behind a proposal of a small-angle neutron scattering instrument for the European Spallation Source under construction in Lund. The instrument...

A new extranodal scoring system based on the prognostically relevant extranodal sites in diffuse large B-cell lymphoma, not otherwise specified treated with chemoimmunotherapy.

Science.gov (United States)

Hwang, Hee Sang; Yoon, Dok Hyun; Suh, Cheolwon; Huh, Jooryung

2016-08-01

Extranodal involvement is a well-known prognostic factor in patients with diffuse large B-cell lymphomas (DLBCL). Nevertheless, the prognostic impact of the extranodal scoring system included in the conventional international prognostic index (IPI) has been questioned in an era where rituximab treatment has become widespread. We investigated the prognostic impacts of individual sites of extranodal involvement in 761 patients with DLBCL who received rituximab-based chemoimmunotherapy. Subsequently, we established a new extranodal scoring system based on extranodal sites, showing significant prognostic correlation, and compared this system with conventional scoring systems, such as the IPI and the National Comprehensive Cancer Network-IPI (NCCN-IPI). An internal validation procedure, using bootstrapped samples, was also performed for both univariate and multivariate models. Using multivariate analysis with a backward variable selection, we found nine extranodal sites (the liver, lung, spleen, central nervous system, bone marrow, kidney, skin, adrenal glands, and peritoneum) that remained significant for use in the final model. Our newly established extranodal scoring system, based on these sites, was better correlated with patient survival than standard scoring systems, such as the IPI and the NCCN-IPI. Internal validation by bootstrapping demonstrated an improvement in model performance of our modified extranodal scoring system. Our new extranodal scoring system, based on the prognostically relevant sites, may improve the performance of conventional prognostic models of DLBCL in the rituximab era and warrants further external validation using large study populations.

Research on Knowledge-Oriented Supply ChainRisk Management System Model

OpenAIRE

Yingchun Guo

2011-01-01

Based on analyzing the characteristics of supply chain risk management under the influences of knowledge, in this paper integrates basic theories and methods of knowledge management into the process of risk management, builds a knowledge-oriented supply chain risk management system model, and proposes relevant strategies, presenting references for practical application of knowledge-oriented supply chain risk management. By means of acquiring, storing, sharing, and transferring supply chain ri...

On the ""early-time"" evolution of variables relevant to turbulence models for Rayleigh-Taylor instability

Energy Technology Data Exchange (ETDEWEB)

Rollin, Bertrand [Los Alamos National Laboratory; Andrews, Malcolm J [Los Alamos National Laboratory

2010-01-01

We present our progress toward setting initial conditions in variable density turbulence models. In particular, we concentrate our efforts on the BHR turbulence model for turbulent Rayleigh-Taylor instability. Our approach is to predict profiles of relevant parameters before the fully turbulent regime and use them as initial conditions for the turbulence model. We use an idealized model of the mixing between two interpenetrating fluids to define the initial profiles for the turbulence model parameters. Velocities and volume fractions used in the idealized mixing model are obtained respectively from a set of ordinary differential equations modeling the growth of the Rayleigh-Taylor instability and from an idealization of the density profile in the mixing layer. A comparison between predicted initial profiles for the turbulence model parameters and initial profiles of the parameters obtained from low Atwood number three dimensional simulations show reasonable agreement.

Modeling life the mathematics of biological systems

CERN Document Server

Garfinkel, Alan; Guo, Yina

2017-01-01

From predator-prey populations in an ecosystem, to hormone regulation within the body, the natural world abounds in dynamical systems that affect us profoundly. This book develops the mathematical tools essential for students in the life sciences to describe these interacting systems and to understand and predict their behavior. Complex feedback relations and counter-intuitive responses are common in dynamical systems in nature; this book develops the quantitative skills needed to explore these interactions. Differential equations are the natural mathematical tool for quantifying change, and are the driving force throughout this book. The use of Euler’s method makes nonlinear examples tractable and accessible to a broad spectrum of early-stage undergraduates, thus providing a practical alternative to the procedural approach of a traditional Calculus curriculum. Tools are developed within numerous, relevant examples, with an emphasis on the construction, evaluation, and interpretation of mathematical models ...

Software Helps Retrieve Information Relevant to the User

Science.gov (United States)

Mathe, Natalie; Chen, James

2003-01-01

The Adaptive Indexing and Retrieval Agent (ARNIE) is a code library, designed to be used by an application program, that assists human users in retrieving desired information in a hypertext setting. Using ARNIE, the program implements a computational model for interactively learning what information each human user considers relevant in context. The model, called a "relevance network," incrementally adapts retrieved information to users individual profiles on the basis of feedback from the users regarding specific queries. The model also generalizes such knowledge for subsequent derivation of relevant references for similar queries and profiles, thereby, assisting users in filtering information by relevance. ARNIE thus enables users to categorize and share information of interest in various contexts. ARNIE encodes the relevance and structure of information in a neural network dynamically configured with a genetic algorithm. ARNIE maintains an internal database, wherein it saves associations, and from which it returns associated items in response to a query. A C++ compiler for a platform on which ARNIE will be utilized is necessary for creating the ARNIE library but is not necessary for the execution of the software.

Model fit versus biological relevance: Evaluating photosynthesis-temperature models for three tropical seagrass species

OpenAIRE

Matthew P. Adams; Catherine J. Collier; Sven Uthicke; Yan X. Ow; Lucas Langlois; Katherine R. O’Brien

2017-01-01

When several models can describe a biological process, the equation that best fits the data is typically considered the best. However, models are most useful when they also possess biologically-meaningful parameters. In particular, model parameters should be stable, physically interpretable, and transferable to other contexts, e.g. for direct indication of system state, or usage in other model types. As an example of implementing these recommended requirements for model parameters, we evaluat...

Choice reaching with a LEGO arm robot (CoRLEGO): The motor system guides visual attention to movement-relevant information.

Science.gov (United States)

Strauss, Soeren; Woodgate, Philip J W; Sami, Saber A; Heinke, Dietmar

2015-12-01

We present an extension of a neurobiologically inspired robotics model, termed CoRLEGO (Choice reaching with a LEGO arm robot). CoRLEGO models experimental evidence from choice reaching tasks (CRT). In a CRT participants are asked to rapidly reach and touch an item presented on the screen. These experiments show that non-target items can divert the reaching movement away from the ideal trajectory to the target item. This is seen as evidence attentional selection of reaching targets can leak into the motor system. Using competitive target selection and topological representations of motor parameters (dynamic neural fields) CoRLEGO is able to mimic this leakage effect. Furthermore if the reaching target is determined by its colour oddity (i.e. a green square among red squares or vice versa), the reaching trajectories become straighter with repetitions of the target colour (colour streaks). This colour priming effect can also be modelled with CoRLEGO. The paper also presents an extension of CoRLEGO. This extension mimics findings that transcranial direct current stimulation (tDCS) over the motor cortex modulates the colour priming effect (Woodgate et al., 2015). The results with the new CoRLEGO suggest that feedback connections from the motor system to the brain's attentional system (parietal cortex) guide visual attention to extract movement-relevant information (i.e. colour) from visual stimuli. This paper adds to growing evidence that there is a close interaction between the motor system and the attention system. This evidence contradicts the traditional conceptualization of the motor system as the endpoint of a serial chain of processing stages. At the end of the paper we discuss CoRLEGO's predictions and also lessons for neurobiologically inspired robotics emerging from this work. Crown Copyright © 2015. Published by Elsevier Ltd. All rights reserved.

Application of all relevant feature selection for failure analysis of parameter-induced simulation crashes in climate models

Science.gov (United States)

Paja, W.; Wrzesień, M.; Niemiec, R.; Rudnicki, W. R.

2015-07-01

The climate models are extremely complex pieces of software. They reflect best knowledge on physical components of the climate, nevertheless, they contain several parameters, which are too weakly constrained by observations, and can potentially lead to a crash of simulation. Recently a study by Lucas et al. (2013) has shown that machine learning methods can be used for predicting which combinations of parameters can lead to crash of simulation, and hence which processes described by these parameters need refined analyses. In the current study we reanalyse the dataset used in this research using different methodology. We confirm the main conclusion of the original study concerning suitability of machine learning for prediction of crashes. We show, that only three of the eight parameters indicated in the original study as relevant for prediction of the crash are indeed strongly relevant, three other are relevant but redundant, and two are not relevant at all. We also show that the variance due to split of data between training and validation sets has large influence both on accuracy of predictions and relative importance of variables, hence only cross-validated approach can deliver robust prediction of performance and relevance of variables.

Towards Measures to Establish the Relevance of Climate Model Output for Decision Support

Science.gov (United States)

Clarke, L.; Smith, L. A.

2007-12-01

How exactly can decision-support and policy making benefit from the use of multiple climate model experiments in terms of coping with the uncertainties on climate change projections? Climate modelling faces challenges beyond those of weather forecasting or even seasonal forecasting, as with climate we are now (and will probably always be) required to extrapolate to regimes in which we have no relevant forecast-verification archive. This suggests a very different approach from traditional methods of mixing models and skill based weighting to gain profitable probabilistic information when a large forecast-verification archive is in hand. In the case of climate, it may prove more rational to search for agreement between our models (in distribution), the aim being to determine the space and timescales on which, given our current understanding, the details of the simulation models are unimportant. This suggestion and others from Smith (2002, Proc. National Acad. Sci. USA 4 (99): 2487-2492) are interpreted in the light of recent advances. Climate models are large nonlinear dynamical systems which insightfully but imperfectly reflect the evolving weather patterns of the Earth. Their use in policy making and decision support assumes both that they contain sufficient information regarding reality to inform the decision, and that this information can be effectively communicated to the decision makers. There is nothing unique about climate modeling and these constraints, they apply in all cases where scientific modeling is applied to real-word actions (other than, perhaps, the action of improving our models). Starting with the issue of communication, figures from the 2007 IPCC Summary for Policy Makers will be constructively criticized from the perspective of decision makers, specifically those of the energy sector and the insurance/reinsurance sector. More information on basic questions of reliability and robustness would be of significant value when determining how heavily

Perspectives on creating clinically relevant blast models for mild traumatic brain injury and post traumatic stress disorder symptoms

Directory of Open Access Journals (Sweden)

Lisa eBrenner

2012-03-01

Full Text Available Military personnel are returning from Iraq and Afghanistan and reporting non-specific physical (somatic, behavioral, psychological, and cognitive symptoms. Many of these symptoms are frequently associated with mild traumatic brain injury (mTBI and/or post traumatic stress disorder (PTSD. Despite significant attention and advances in assessment and intervention for these two conditions, challenges persist. To address this, clinically relevant blast models are essential in the full characterization of this type of injury, as well as in the testing and identification of potential treatment strategies. In this publication, existing diagnostic challenges and current treatment practices for mTBI and/or PTSD will be summarized, along with suggestions regarding how what has been learned from existing models of PTSD and traditional mechanism (e.g., non-blast TBI can be used to facilitate the development of clinically relevant blast models.

a System Dynamics Model to Study the Importance of Infrastructure Facilities on Quality of Primary Education System in Developing Countries

Science.gov (United States)

Pedamallu, Chandra Sekhar; Ozdamar, Linet; Weber, Gerhard-Wilhelm; Kropat, Erik

2010-06-01

The system dynamics approach is a holistic way of solving problems in real-time scenarios. This is a powerful methodology and computer simulation modeling technique for framing, analyzing, and discussing complex issues and problems. System dynamics modeling and simulation is often the background of a systemic thinking approach and has become a management and organizational development paradigm. This paper proposes a system dynamics approach for study the importance of infrastructure facilities on quality of primary education system in developing nations. The model is proposed to be built using the Cross Impact Analysis (CIA) method of relating entities and attributes relevant to the primary education system in any given community. We offer a survey to build the cross-impact correlation matrix and, hence, to better understand the primary education system and importance of infrastructural facilities on quality of primary education. The resulting model enables us to predict the effects of infrastructural facilities on the access of primary education by the community. This may support policy makers to take more effective actions in campaigns.

Dynamic modeling and response of soil-wall systems

International Nuclear Information System (INIS)

Veletsos, A.S.; Younan, A.H.

1993-10-01

The study reported herein is the third in a series of investigations motivated by need to gain improved understanding of the responses to earthquakes of deeply embedded and underground tanks storing radioactive wastes, and to develop rational but simple methods of analysis and design for such systems. Following a brief review of the errors that may result from the use of a popular model for evaluating the dynamic soil forces induced in a base-excited rigid wall retaining an elastic stratum, the sources of the errors are identified and a modification is proposed which defines correctly the action of the system. In the proposed modification, the stratum is modeled by a series of elastically supported, semi-infinite horizontal bars with distributed mass instead of massless springs. The concepts involved are introduced by reference to a system composed of a fixed-based wall and a homogeneous elastic stratum, and are then applied to the analysis of more complex soil-wall systems. Both harmonic and transient excitations are considered, and comprehensive numerical solutions are presented which elucidate the actions involved and the effects and relative importance of the relevant parameters

Fidelity in Animal Modeling: Prerequisite for a Mechanistic Research Front Relevant to the Inflammatory Incompetence of Acute Pediatric Malnutrition

Science.gov (United States)

Woodward, Bill

2016-01-01

Inflammatory incompetence is characteristic of acute pediatric protein-energy malnutrition, but its underlying mechanisms remain obscure. Perhaps substantially because the research front lacks the driving force of a scholarly unifying hypothesis, it is adrift and research activity is declining. A body of animal-based research points to a unifying paradigm, the Tolerance Model, with some potential to offer coherence and a mechanistic impetus to the field. However, reasonable skepticism prevails regarding the relevance of animal models of acute pediatric malnutrition; consequently, the fundamental contributions of the animal-based component of this research front are largely overlooked. Design-related modifications to improve the relevance of animal modeling in this research front include, most notably, prioritizing essential features of pediatric malnutrition pathology rather than dietary minutiae specific to infants and children, selecting windows of experimental animal development that correspond to targeted stages of pediatric immunological ontogeny, and controlling for ontogeny-related confounders. In addition, important opportunities are presented by newer tools including the immunologically humanized mouse and outbred stocks exhibiting a magnitude of genetic heterogeneity comparable to that of human populations. Sound animal modeling is within our grasp to stimulate and support a mechanistic research front relevant to the immunological problems that accompany acute pediatric malnutrition. PMID:27077845

Fidelity in Animal Modeling: Prerequisite for a Mechanistic Research Front Relevant to the Inflammatory Incompetence of Acute Pediatric Malnutrition.

Science.gov (United States)

Woodward, Bill

2016-04-11

Inflammatory incompetence is characteristic of acute pediatric protein-energy malnutrition, but its underlying mechanisms remain obscure. Perhaps substantially because the research front lacks the driving force of a scholarly unifying hypothesis, it is adrift and research activity is declining. A body of animal-based research points to a unifying paradigm, the Tolerance Model, with some potential to offer coherence and a mechanistic impetus to the field. However, reasonable skepticism prevails regarding the relevance of animal models of acute pediatric malnutrition; consequently, the fundamental contributions of the animal-based component of this research front are largely overlooked. Design-related modifications to improve the relevance of animal modeling in this research front include, most notably, prioritizing essential features of pediatric malnutrition pathology rather than dietary minutiae specific to infants and children, selecting windows of experimental animal development that correspond to targeted stages of pediatric immunological ontogeny, and controlling for ontogeny-related confounders. In addition, important opportunities are presented by newer tools including the immunologically humanized mouse and outbred stocks exhibiting a magnitude of genetic heterogeneity comparable to that of human populations. Sound animal modeling is within our grasp to stimulate and support a mechanistic research front relevant to the immunological problems that accompany acute pediatric malnutrition.

Clinical and Neurobiological Relevance of Current Animal Models of Autism Spectrum Disorders

Science.gov (United States)

Kim, Ki Chan; Gonzales, Edson Luck; Lázaro, María T.; Choi, Chang Soon; Bahn, Geon Ho; Yoo, Hee Jeong; Shin, Chan Young

2016-01-01

Autism spectrum disorder (ASD) is a neurodevelopmental disorder characterized by social and communication impairments, as well as repetitive and restrictive behaviors. The phenotypic heterogeneity of ASD has made it overwhelmingly difficult to determine the exact etiology and pathophysiology underlying the core symptoms, which are often accompanied by comorbidities such as hyperactivity, seizures, and sensorimotor abnormalities. To our benefit, the advent of animal models has allowed us to assess and test diverse risk factors of ASD, both genetic and environmental, and measure their contribution to the manifestation of autistic symptoms. At a broader scale, rodent models have helped consolidate molecular pathways and unify the neurophysiological mechanisms underlying each one of the various etiologies. This approach will potentially enable the stratification of ASD into clinical, molecular, and neurophenotypic subgroups, further proving their translational utility. It is henceforth paramount to establish a common ground of mechanistic theories from complementing results in preclinical research. In this review, we cluster the ASD animal models into lesion and genetic models and further classify them based on the corresponding environmental, epigenetic and genetic factors. Finally, we summarize the symptoms and neuropathological highlights for each model and make critical comparisons that elucidate their clinical and neurobiological relevance. PMID:27133257

Equation-free model reduction for complex dynamical systems

International Nuclear Information System (INIS)

Le Maitre, O. P.; Mathelin, L.; Le Maitre, O. P.

2010-01-01

This paper presents a reduced model strategy for simulation of complex physical systems. A classical reduced basis is first constructed relying on proper orthogonal decomposition of the system. Then, unlike the alternative approaches, such as Galerkin projection schemes for instance, an equation-free reduced model is constructed. It consists in the determination of an explicit transformation, or mapping, for the evolution over a coarse time-step of the projection coefficients of the system state on the reduced basis. The mapping is expressed as an explicit polynomial transformation of the projection coefficients and is computed once and for all in a pre-processing stage using the detailed model equation of the system. The reduced system can then be advanced in time by successive applications of the mapping. The CPU cost of the method lies essentially in the mapping approximation which is performed offline, in a parallel fashion, and only once. Subsequent application of the mapping to perform a time-integration is carried out at a low cost thanks to its explicit character. Application of the method is considered for the 2-D flow around a circular cylinder. We investigate the effectiveness of the reduced model in rendering the dynamics for both asymptotic state and transient stages. It is shown that the method leads to a stable and accurate time-integration for only a fraction of the cost of a detailed simulation, provided that the mapping is properly approximated and the reduced basis remains relevant for the dynamics investigated. (authors)

RESEARCH OF MULTICRITERIAL DECISION-MAKING MODEL FOR EDUCATIONAL INFORMATION SYSTEMS

Directory of Open Access Journals (Sweden)

V. V. Serbin

2016-09-01

Full Text Available Subject of Research. Decision-making model is offered for informational and educational systems. The study of multi-criteria model is carried out taking into account knowledge, reaction and doubt. Method. The model of material proficiency by the user is based on identification of the personal characteristics when operating with the system. As a result of personal characteristics tracking in the system, an image is formed for each user that can be used for identifying his state: knowledge level, proportion of error, handwriting information, etc. During registration the user is passing an input test. Multi-criteria test results are automatically stored in the user's personal database (agent matrix and accounted for psychological comfort, formation of the next system content, management of knowledge levels, decision-making when working with the system. The proposed method gives a more clear and "transparent situational picture" for objective decision-making. Main Results. Implementation of multi-criteria decision-making model contributes to the quality of distance education. Also, the method makes it possible to reduce the probability of guessing the correct answer, thus increases the objectivity of knowledge level evaluation in diagnostic systems for management of learning process based on remote technologies. Practical Relevance. Obtained theoretical results of the work are used in training systems on the basis of multi-criteria decision models. Thus, the proposed model leads to an increase in the average score of about 0.3-0.4 points and reduces the training time in 1.5 to 2.0 times.

Use of an ecologically relevant modelling approach to improve remote sensing-based schistosomiasis risk profiling

Directory of Open Access Journals (Sweden)

Yvonne Walz

2015-11-01

Full Text Available Schistosomiasis is a widespread water-based disease that puts close to 800 million people at risk of infection with more than 250 million infected, mainly in sub-Saharan Africa. Transmission is governed by the spatial distribution of specific freshwater snails that act as intermediate hosts and the frequency, duration and extent of human bodies exposed to infested water sources during human water contact. Remote sensing data have been utilized for spatially explicit risk profiling of schistosomiasis. Since schistosomiasis risk profiling based on remote sensing data inherits a conceptual drawback if school-based disease prevalence data are directly related to the remote sensing measurements extracted at the location of the school, because the disease transmission usually does not exactly occur at the school, we took the local environment around the schools into account by explicitly linking ecologically relevant environmental information of potential disease transmission sites to survey measurements of disease prevalence. Our models were validated at two sites with different landscapes in Côte d’Ivoire using high- and moderateresolution remote sensing data based on random forest and partial least squares regression. We found that the ecologically relevant modelling approach explained up to 70% of the variation in Schistosoma infection prevalence and performed better compared to a purely pixelbased modelling approach. Furthermore, our study showed that model performance increased as a function of enlarging the school catchment area, confirming the hypothesis that suitable environments for schistosomiasis transmission rarely occur at the location of survey measurements.

Optimization and modeling of a photovoltaic solar integrated system by neural networks

International Nuclear Information System (INIS)

Ashhab, Moh'd Sami S.

2008-01-01

A photovoltaic solar integrated system is modeled with artificial neural networks (ANN's). Data relevant to the system performance was collected on April, 4th 1993 and every 15 min during the day. This input-output data is used to train the ANN. The ANN approximates the data well and therefore can be relied on in predicting the system performance, namely, system efficiencies. The solar system consists of a solar trainer which contains a photovoltaic panel, a DC centrifugal pump, flat plate collectors, storage tank, a flowmeter for measuring the water mass flow rate, pipes, pyranometer for measuring the solar intensity, thermocouples for measuring various system temperatures and wind speed meter. The complex method constrained optimization is applied to the solar system ANN model to find the operating conditions of the system that will produce the maximum system efficiencies. This information will be very hard to obtain by just looking at the available historical input-output data

Optimization and modeling of a photovoltaic solar integrated system by neural networks

Energy Technology Data Exchange (ETDEWEB)

Ashhab, Moh' d Sami S. [Department of Mechanical Engineering, The Hashemite University, Zarqa 13115 (Jordan)

2008-11-15

A photovoltaic solar integrated system is modeled with artificial neural networks (ANN's). Data relevant to the system performance was collected on April, 4th 1993 and every 15 min during the day. This input-output data is used to train the ANN. The ANN approximates the data well and therefore can be relied on in predicting the system performance, namely, system efficiencies. The solar system consists of a solar trainer which contains a photovoltaic panel, a DC centrifugal pump, flat plate collectors, storage tank, a flowmeter for measuring the water mass flow rate, pipes, pyranometer for measuring the solar intensity, thermocouples for measuring various system temperatures and wind speed meter. The complex method constrained optimization is applied to the solar system ANN model to find the operating conditions of the system that will produce the maximum system efficiencies. This information will be very hard to obtain by just looking at the available historical input-output data. (author)

A Robust Feedforward Model of the Olfactory System.

Directory of Open Access Journals (Sweden)

Yilun Zhang

2016-04-01

Full Text Available Most natural odors have sparse molecular composition. This makes the principles of compressed sensing potentially relevant to the structure of the olfactory code. Yet, the largely feedforward organization of the olfactory system precludes reconstruction using standard compressed sensing algorithms. To resolve this problem, recent theoretical work has shown that signal reconstruction could take place as a result of a low dimensional dynamical system converging to one of its attractor states. However, the dynamical aspects of optimization slowed down odor recognition and were also found to be susceptible to noise. Here we describe a feedforward model of the olfactory system that achieves both strong compression and fast reconstruction that is also robust to noise. A key feature of the proposed model is a specific relationship between how odors are represented at the glomeruli stage, which corresponds to a compression, and the connections from glomeruli to third-order neurons (neurons in the olfactory cortex of vertebrates or Kenyon cells in the mushroom body of insects, which in the model corresponds to reconstruction. We show that should this specific relationship hold true, the reconstruction will be both fast and robust to noise, and in particular to the false activation of glomeruli. The predicted connectivity rate from glomeruli to third-order neurons can be tested experimentally.

Fault Diagnosis of Nonlinear Systems Using Structured Augmented State Models

Institute of Scientific and Technical Information of China (English)

Jochen Aβfalg; Frank Allg(o)wer

2007-01-01

This paper presents an internal model approach for modeling and diagnostic functionality design for nonlinear systems operating subject to single- and multiple-faults. We therefore provide the framework of structured augmented state models. Fault characteristics are considered to be generated by dynamical exosystems that are switched via equality constraints to overcome the augmented state observability limiting the number of diagnosable faults. Based on the proposed model, the fault diagnosis problem is specified as an optimal hybrid augmented state estimation problem. Sub-optimal solutions are motivated and exemplified for the fault diagnosis of the well-known three-tank benchmark. As the considered class of fault diagnosis problems is large, the suggested approach is not only of theoretical interest but also of high practical relevance.

Filtered selection coupled with support vector machines generate a functionally relevant prediction model for colorectal cancer

Directory of Open Access Journals (Sweden)

Gabere MN

2016-06-01

Full Text Available Musa Nur Gabere,1 Mohamed Aly Hussein,1 Mohammad Azhar Aziz2 1Department of Bioinformatics, King Abdullah International Medical Research Center/King Saud bin Abdulaziz University for Health Sciences, Riyadh, Saudi Arabia; 2Colorectal Cancer Research Program, Department of Medical Genomics, King Abdullah International Medical Research Center, Riyadh, Saudi Arabia Purpose: There has been considerable interest in using whole-genome expression profiles for the classification of colorectal cancer (CRC. The selection of important features is a crucial step before training a classifier.Methods: In this study, we built a model that uses support vector machine (SVM to classify cancer and normal samples using Affymetrix exon microarray data obtained from 90 samples of 48 patients diagnosed with CRC. From the 22,011 genes, we selected the 20, 30, 50, 100, 200, 300, and 500 genes most relevant to CRC using the minimum-redundancy–maximum-relevance (mRMR technique. With these gene sets, an SVM model was designed using four different kernel types (linear, polynomial, radial basis function [RBF], and sigmoid.Results: The best model, which used 30 genes and RBF kernel, outperformed other combinations; it had an accuracy of 84% for both ten fold and leave-one-out cross validations in discriminating the cancer samples from the normal samples. With this 30 genes set from mRMR, six classifiers were trained using random forest (RF, Bayes net (BN, multilayer perceptron (MLP, naïve Bayes (NB, reduced error pruning tree (REPT, and SVM. Two hybrids, mRMR + SVM and mRMR + BN, were the best models when tested on other datasets, and they achieved a prediction accuracy of 95.27% and 91.99%, respectively, compared to other mRMR hybrid models (mRMR + RF, mRMR + NB, mRMR + REPT, and mRMR + MLP. Ingenuity pathway analysis was used to analyze the functions of the 30 genes selected for this model and their potential association with CRC: CDH3, CEACAM7, CLDN1, IL8, IL6R, MMP1

The Relevance Voxel Machine (RVoxM): A Self-Tuning Bayesian Model for Informative Image-Based Prediction

DEFF Research Database (Denmark)

Sabuncu, Mert R.; Van Leemput, Koen

2012-01-01

This paper presents the relevance voxel machine (RVoxM), a dedicated Bayesian model for making predictions based on medical imaging data. In contrast to the generic machine learning algorithms that have often been used for this purpose, the method is designed to utilize a small number of spatially...

Morphodynamic Modeling Using The SToRM Computational System

Science.gov (United States)

Simoes, F.

2016-12-01

The framework of the work presented here is the open source SToRM (System for Transport and River Modeling) eco-hydraulics modeling system, which is one of the models released with the iRIC hydraulic modeling graphical software package (http://i-ric.org/). SToRM has been applied to the simulation of various complex environmental problems, including natural waterways, steep channels with regime transition, and rapidly varying flood flows with wetting and drying fronts. In its previous version, however, channel bed was treated as static and the ability of simulating sediment transport rates or bed deformation was not included. The work presented here reports SToRM's newly developed extensions to expand the system's capability to calculate morphological changes in alluvial river systems. The sediment transport module of SToRM has been developed based on the general recognition that meaningful advances depend on physically solid formulations and robust and accurate numerical solution methods. The basic concepts of mass and momentum conservation are used, where the feedback mechanisms between the flow of water, the sediment in transport, and the bed changes are directly incorporated in the governing equations used in the mathematical model. This is accomplished via a non-capacity transport formulation based on the work of Cao et al. [Z. Cao et al., "Non-capacity or capacity model for fluvial sediment transport," Water Management, 165(WM4):193-211, 2012], where the governing equations are augmented with source/sink terms due to water-sediment interaction. The same unsteady, shock-capturing numerical schemes originally used in SToRM were adapted to the new physics, using a control volume formulation over unstructured computational grids. The presentation will include a brief overview of these methodologies, and the result of applications of the model to a number of relevant physical test cases with movable bed, where computational results are compared to experimental data.

Promoting culturally competent chronic pain management using the clinically relevant continuum model.

Science.gov (United States)

Monsivais, Diane B

2011-06-01

This article reviews the culture of biomedicine and current practices in pain management education, which often merge to create a hostile environment for effective chronic pain care. Areas of cultural tensions in chronic pain frequently involve the struggle to achieve credibility regarding one's complaints of pain (or being believed that the pain is real) and complying with pain medication protocols. The clinically relevant continuum model is presented as a framework allowing providers to approach care from an evidence-based, culturally appropriate (patient centered) perspective that takes into account the highest level of evidence available, provider expertise, and patient preferences and values. Copyright © 2011 Elsevier Inc. All rights reserved.

[Influence of reverse osmosis concentrate on physicochemical parameters of Sini decoction material system and their relevance].

Science.gov (United States)

Jin, Tang-Hui; Zhang, Liu-Hong; Zhu, Hua-Xu; Guo, Li-Wei; Li, Bo; Lu, Ming-Ming

2014-04-01

By studying the process of reverse osmosis system for traditional Chinese medicine materials physicochemical parameters affecting the osmotic pressure of its relevance, new compound system reverse osmosis process design methods were explored. Three concentrations materials for high, middle and low were dubbed with Sini decoction as a model drug, and pretreated by 50 thousand relative molecular weight cut-off ultrafiltration membrane. The viscosity, turbidity, conductivity, salinity, TDS, pH value and osmotic pressure of each sample were determined after the reverse osmosis to study the physical and chemical parameters between their respective correlations with the osmotic pressure, and characterized by HPLC chromatograms showing changes before and after the main chemical composition of samples of reverse osmosis. Conductivity-osmotic pressure, salinity-osmotic pressure of the linear correlation coefficient, TDS-osmotic pressure between the three sets of parameters were 0.963 8, 0.932 7, 0.973 7, respectively. Reverse osmosis concentrate and its characteristic spectrum ultrafiltrate HPLC similarity were up to 0. 968 or more, except the low concentrations. There is a significant correlation between the three physicochemical parameters (conductivity, salinity, TDS) and osmotic pressure of each sample system, and there is also significant linear correlation between salinity, conductivity, TDS. The original chemical composition of Sini decoction material concentrate was completely remained after the process of reverse osmosis.

Investigation of droplet nucleation in CCS relevant systems – design and testing of the expansion chamber

Directory of Open Access Journals (Sweden)

Čenský Miroslav

2018-01-01

Full Text Available A unique in-house designed experimental apparatus for investigation of nucleation of droplets in CCS relevant systems is being developed by the present team. The apparatus allows simulating various processes relevant to CCS technologies. Gaseous mixtures with CO2 are prepared in a Mixture Preparation Device (MPD based on accurate adjustment of flow rates of individual components [EPJ Web of Conferences 143, 02140 (2017]. The mixture then flows into an expansion chamber, where it undergoes a rapid adiabatic expansion. As a consequence of adiabatic cooling, the mixture becomes supersaturated and nucleation and simultaneous growth of droplets occurs. In this study, we describe the design and testing of the expansion part of the experimental setup. The rapid expansion was realized using two valve systems, one for low pressures (up to 0.7 MPa and the other for high pressures (up to 10 MPa. A challenge for a proper design of the expansion system is avoiding acoustic oscillations. These can occur either in the mode of Helmholtz resonator, where the compressible gas in the chamber acts as a spring and the rapidly moving gas in the valve system as a mass, or in the “flute” mode, where acoustic waves are generated in a long outlet tubing.

Systems pharmacology - Towards the modeling of network interactions.

Science.gov (United States)

Danhof, Meindert

2016-10-30

Mechanism-based pharmacokinetic and pharmacodynamics (PKPD) and disease system (DS) models have been introduced in drug discovery and development research, to predict in a quantitative manner the effect of drug treatment in vivo in health and disease. This requires consideration of several fundamental properties of biological systems behavior including: hysteresis, non-linearity, variability, interdependency, convergence, resilience, and multi-stationarity. Classical physiology-based PKPD models consider linear transduction pathways, connecting processes on the causal path between drug administration and effect, as the basis of drug action. Depending on the drug and its biological target, such models may contain expressions to characterize i) the disposition and the target site distribution kinetics of the drug under investigation, ii) the kinetics of target binding and activation and iii) the kinetics of transduction. When connected to physiology-based DS models, PKPD models can characterize the effect on disease progression in a mechanistic manner. These models have been found useful to characterize hysteresis and non-linearity, yet they fail to explain the effects of the other fundamental properties of biological systems behavior. Recently systems pharmacology has been introduced as novel approach to predict in vivo drug effects, in which biological networks rather than single transduction pathways are considered as the basis of drug action and disease progression. These models contain expressions to characterize the functional interactions within a biological network. Such interactions are relevant when drugs act at multiple targets in the network or when homeostatic feedback mechanisms are operative. As a result systems pharmacology models are particularly useful to describe complex patterns of drug action (i.e. synergy, oscillatory behavior) and disease progression (i.e. episodic disorders). In this contribution it is shown how physiology-based PKPD and

Applications of system dynamics modelling to support health policy.

Science.gov (United States)

Atkinson, Jo-An M; Wells, Robert; Page, Andrew; Dominello, Amanda; Haines, Mary; Wilson, Andrew

2015-07-09

The value of systems science modelling methods in the health sector is increasingly being recognised. Of particular promise is the potential of these methods to improve operational aspects of healthcare capacity and delivery, analyse policy options for health system reform and guide investments to address complex public health problems. Because it lends itself to a participatory approach, system dynamics modelling has been a particularly appealing method that aims to align stakeholder understanding of the underlying causes of a problem and achieve consensus for action. The aim of this review is to determine the effectiveness of system dynamics modelling for health policy, and explore the range and nature of its application. A systematic search was conducted to identify articles published up to April 2015 from the PubMed, Web of Knowledge, Embase, ScienceDirect and Google Scholar databases. The grey literature was also searched. Papers eligible for inclusion were those that described applications of system dynamics modelling to support health policy at any level of government. Six papers were identified, comprising eight case studies of the application of system dynamics modelling to support health policy. No analytic studies were found that examined the effectiveness of this type of modelling. Only three examples engaged multidisciplinary stakeholders in collective model building. Stakeholder participation in model building reportedly facilitated development of a common 'mental map' of the health problem, resulting in consensus about optimal policy strategy and garnering support for collaborative action. The paucity of relevant papers indicates that, although the volume of descriptive literature advocating the value of system dynamics modelling is considerable, its practical application to inform health policy making is yet to be routinely applied and rigorously evaluated. Advances in software are allowing the participatory model building approach to be extended to

Modeling and power system stability of VSC-HVDC systems for grid-connection of large offshore windfarms

Energy Technology Data Exchange (ETDEWEB)

Xue Yijing [Vestas China, Beijing (China); Akhmatov, Vladislav [Technical Univ. of Denmark, Lyngby (Denmark). Centre for Electric Technology

2009-07-01

Utilization of Voltage Source Converter (VSC) - High Voltage Direct Current (HVDC) systems for grid-connection of large offshore windfarms becomes relevant as installed power capacities as well as distances to the connection points of on-land transmission systems increase. At the same time, the grid code requirements of the Transmission System Operators (TSO), including ancillary system services and Low-Voltage Fault-Ride-Through (LVFRT) capability of large offshore windfarms, become more demanding. This paper presents a general-level model of and a LVFRT solution for a VSC-HVDC system for grid-connection of large offshore windfarms. The VSC-HVDC model is implemented using a general approach of independent control of active and reactive power in normal operations. The on-land VSC inverter, i.e. a grid-side inverter, provides voltage support to the transmission system and comprises a LVFRT solution in short-circuit faults. The presented model, LVFRT solution and impact on the system stability are investigated as a case study of a 1,000 MW offshore windfarm grid-connected through a VSC-HVDC system. The investigation is carried out on a model of the west Danish, with some elements of the north German, 400 kV, 220 kV and 150 kV transmission systems stage 2005-2006 using the DIgSILENT PowerFactory simulation program. In the investigation, a thermal power plant just south to the Danish border has been substituted by this 1,000 MW offshore windfarm utilizing the VSC-HVDC system. The investigation has shown that the substitution of a thermal power plant by a VSC-HVDC connected offshore windfarm should not have any negative impact on the short-term stability of the west Danish transmission system. The investigation should be repeated applying updated system model stages and offshore wind power commissioning schedules in the North and Baltic Seas. (orig.)

DETERMINATION OF RELEVANT FEATURES OF A SCALE MODEL FOR A 55 000 DWT BULK CARRIER NECESSARY TO STUDY THE SHIP MANEUVERABILITY

Directory of Open Access Journals (Sweden)

ALECU TOMA

2016-06-01

Full Text Available The study method of a ship behavior based on practical tests on scale models is widely used both leading scientists and engineers, architects and researchers in the naval field. In this paper we propose to determine the parameters of a ship handling characteristics relevant to study the 55,000 dwt bulk carrier using a scale model. Scientific background for practical experimentation of this techniques necessary to built a scale model ship consists in applying the principles of similarity or "similitude". The scale model achieved by applying the laws of similarity must allow, through approximations available in certain circumstances, finding relevant parameters needed to simplify and solve the Navier-Stokes equations. These parameters are necessary for modeling the interaction between hull of the real ship and the fluid motion.

Chemical Mechanisms and Their Applications in the Goddard Earth Observing System (GEOS) Earth System Model.

Science.gov (United States)

Nielsen, J Eric; Pawson, Steven; Molod, Andrea; Auer, Benjamin; da Silva, Arlindo M; Douglass, Anne R; Duncan, Bryan; Liang, Qing; Manyin, Michael; Oman, Luke D; Putman, William; Strahan, Susan E; Wargan, Krzysztof

2017-12-01

NASA's Goddard Earth Observing System (GEOS) Earth System Model (ESM) is a modular, general circulation model (GCM), and data assimilation system (DAS) that is used to simulate and study the coupled dynamics, physics, chemistry, and biology of our planet. GEOS is developed by the Global Modeling and Assimilation Office (GMAO) at NASA Goddard Space Flight Center. It generates near-real-time analyzed data products, reanalyses, and weather and seasonal forecasts to support research targeted to understanding interactions among Earth System processes. For chemistry, our efforts are focused on ozone and its influence on the state of the atmosphere and oceans, and on trace gas data assimilation and global forecasting at mesoscale discretization. Several chemistry and aerosol modules are coupled to the GCM, which enables GEOS to address topics pertinent to NASA's Earth Science Mission. This paper describes the atmospheric chemistry components of GEOS and provides an overview of its Earth System Modeling Framework (ESMF)-based software infrastructure, which promotes a rich spectrum of feedbacks that influence circulation and climate, and impact human and ecosystem health. We detail how GEOS allows model users to select chemical mechanisms and emission scenarios at run time, establish the extent to which the aerosol and chemical components communicate, and decide whether either or both influence the radiative transfer calculations. A variety of resolutions facilitates research on spatial and temporal scales relevant to problems ranging from hourly changes in air quality to trace gas trends in a changing climate. Samples of recent GEOS chemistry applications are provided.

An undergraduate course, and new textbook, on ``Physical Models of Living Systems''

Science.gov (United States)

Nelson, Philip

2015-03-01

I'll describe an intermediate-level course on ``Physical Models of Living Systems.'' The only prerequisite is first-year university physics and calculus. The course is a response to rapidly growing interest among undergraduates in several science and engineering departments. Students acquire several research skills that are often not addressed in traditional courses, including: basic modeling skills, probabilistic modeling skills, data analysis methods, computer programming using a general-purpose platform like MATLAB or Python, dynamical systems, particularly feedback control. These basic skills, which are relevant to nearly any field of science or engineering, are presented in the context of case studies from living systems, including: virus dynamics; bacterial genetics and evolution of drug resistance; statistical inference; superresolution microscopy; synthetic biology; naturally evolved cellular circuits. Publication of a new textbook by WH Freeman and Co. is scheduled for December 2014. Supported in part by EF-0928048 and DMR-0832802.

Modelling of the chemical state in groundwater infiltration systems

International Nuclear Information System (INIS)

Zysset, A.

1993-01-01

Groundwater is replenished by water stemming either from precipitations, lakes or rivers. The area where such an infiltration occurs is characterized by a change in the environmental conditions, such as a decrease of the flow velocity and an increase in the solid surface marking the boundary of the flow field. With these changes new chemical processes may become relevant to the transport behavior of contaminants. Since the rates of chemical processes usually are a function of the concentrations of several species, an understanding of infiltration sites may require a multicomponent approach. The present study aims at formulating a mathematical model together with its numerical solution for groundwater infiltration sites. Such a model should improve the understanding of groundwater quality changes related to infiltrating contaminants. The groundwater quality is of vital interest to men because at many places most of the drinking water originates from groundwater. In the first part of the present study two partial models are formulated: one accounting for the transport in a one-dimensional, homogeneous and saturated porous medium, the other accounting for chemical reactions. This second model is initially stated for general kinetic systems. Then, it is specified for two systems, namely for a system governed only by reactions which are fast compared to the transport processes and for a system with biologically mediated redox reactions of dissolved substrates. In the second part of the study a numerical solution to the model is developed. For this purpose, the two partial models are coupled. The coupling is either iterative as in the case of a system with fast reactions or sequential as in all other cases. The numerical solutions of simple test cases are compared to analytical solutions. In the third part the model is evaluated using observations of infiltration sites reported in the literature. (author) figs., tabs., 155 refs

On the ""early-time"" evolution of variables relevant to turbulence models for the Rayleigh-Taylor instability

Energy Technology Data Exchange (ETDEWEB)

Rollin, Bertrand [Los Alamos National Laboratory; Andrews, Malcolm J [Los Alamos National Laboratory

2010-01-01

We present our progress toward setting initial conditions in variable density turbulence models. In particular, we concentrate our efforts on the BHR turbulence model for turbulent Rayleigh-Taylor instability. Our approach is to predict profiles of relevant variables before fully turbulent regime and use them as initial conditions for the turbulence model. We use an idealized model of mixing between two interpenetrating fluids to define the initial profiles for the turbulence model variables. Velocities and volume fractions used in the idealized mixing model are obtained respectively from a set of ordinary differential equations modeling the growth of the Rayleigh-Taylor instability and from an idealization of the density profile in the mixing layer. A comparison between predicted profiles for the turbulence model variables and profiles of the variables obtained from low Atwood number three dimensional simulations show reasonable agreement.

Relevant Factors in The Post-Merger Systems Integration and Information Technology in Brazilian Banks

Directory of Open Access Journals (Sweden)

Marcel Ginotti Pires

2017-01-01

Full Text Available This article discusses the factors present in post-merger integration of Systems and Information Technology (SIT that lead to positive and negative results in mergers and acquisitions (M & A. The research comprised three of the largest acquiring banks in Brazil. We adopted two methods of research, qualitative, to operationalize the theoretical concepts and quantitative, to test the hypotheses. We interviewed six executives of banks that held relevant experience in M & A processes. Subsequently, we applied questionnaires to IT professionals who were involved in the SIT integration processes. The results showed that the quality and expertise of the integration teams and managing the integration were the most relevant factors in the processes, with positive results for increased efficiency and the increased capacity of SIT. Negative results were due to failures in exploiting learning opportunities, the loss of employees and the inexpressive record of integration procedures.

The value relevance of environmental emissions

Directory of Open Access Journals (Sweden)

Melinda Lydia Nelwan

2016-07-01

Full Text Available This study examines whether environmental performance has value relevance by investigating the relations between environmental emissions and stock prices for the U.S. public companies. The previous studies argued that the conjectured relations between accounting performance measures and environmental performance do not have a strong theoretical basis, and the modeling of relations between market per-formance measures and environmental performance do not adequately consider the relevance of accounting performance to market value. Therefore, this study examines whether publicly reported environmental emissions provide incremental information to accounting earnings in pricing companies stocks. It is done among the complete set of industries covered by Toxics Release Inventory (TRI reporting for the period 2007 to 2010. Using Ohlson model but modified to include different types of emis-sions, it is found that ground emissions (underground injection and land emissions are value relevant but other emission types (air and water and transferred-out emis-sions appear to not provide incremental information in the valuation model. The result in this study raise concerns that different types of emissions are assessed differently by the market, confirming that studies should not aggregate such measures.

Formal Requirements Modeling for Reactive Systems with Coloured Petri Nets

DEFF Research Database (Denmark)

Tjell, Simon

This dissertation presents the contributions of seven publications all concerned with the application of Coloured Petri Nets (CPN) to requirements modeling for reactive systems. The publications are introduced along with relevant background material and related work, and their contributions...... to take into concern that the behavior of human actors is less likely to be predictable than the behavior of e.g. mechanical components.   In the second approach, the CPN model is parameterized and utilizes a generic and reusable CPN module operating as an SD interpreter. In addition to distinguishing...... and events. A tool is presented that allows automated validation of the structure of CPN models with respect to the guidelines. Next, three publications on integrating Jackson's Problem Frames with CPN requirements models are presented: The first publication introduces a method for systematically structuring...

Systemic autoimmunity induced by the TLR7/8 agonist Resiquimod causes myocarditis and dilated cardiomyopathy in a new mouse model of autoimmune heart disease

Directory of Open Access Journals (Sweden)

Muneer G. Hasham

2017-03-01

Full Text Available Systemic autoimmune diseases such as systemic lupus erythematosus (SLE and rheumatoid arthritis (RA show significant heart involvement and cardiovascular morbidity, which can be due to systemically increased levels of inflammation or direct autoreactivity targeting cardiac tissue. Despite high clinical relevance, cardiac damage secondary to systemic autoimmunity lacks inducible rodent models. Here, we characterise immune-mediated cardiac tissue damage in a new model of SLE induced by topical application of the Toll-like receptor 7/8 (TLR7/8 agonist Resiquimod. We observe a cardiac phenotype reminiscent of autoimmune-mediated dilated cardiomyopathy, and identify auto-antibodies as major contributors to cardiac tissue damage. Resiquimod-induced heart disease is a highly relevant mouse model for mechanistic and therapeutic studies aiming to protect the heart during autoimmunity.

A model of heavy ion detection in physical and biological systems

International Nuclear Information System (INIS)

Waligorski, M.P.R.

1988-01-01

Track structure theory (the Katz model) and its application to the detection of heavy ions in physical and biological systems are reviewed. Following the use of a new corrected formula describing the radial distribution of average dose around the path of a heavy ion, based on results of Monte Carlo calculations and on results of experimental measurements, better agreement is achieved between model calculations and experimentally measured relative effectiveness, for enzymatic and viral systems, for the Fricke dosemeter and for alanine and thermoluminescent (TDL-700) dosemeters irradiated with beams of heavy charged particles. From experimentally measured RBE dependences for survival and frequency of neoplastic transformations in a mammalian cell culture irradiated with beams of energetic heavy ions, values of model parameters for these biological endpoints have been extracted, and a model extrapolation to the low-dose region performed. Results of model calculations are then compared with evaluations of the lung cancer hazard in populations exposed to radon and its progeny. The model can be applied to practical phenomenological analysis of radiation damage in solid-state systems and to dosimetry of charged particle and fast neutron beams using a variety of detectors. The model can also serve as a guide in building more basic models of the action of ionizing radiation with physical and biological systems and guide of development of models of radiation risk more relevant than that used presently. 185 refs., 31 figs., 3 tabs. (author)

Function of dynamic models in systems biology: linking structure to behaviour.

Science.gov (United States)

Knüpfer, Christian; Beckstein, Clemens

2013-10-08

Dynamic models in Systems Biology are used in computational simulation experiments for addressing biological questions. The complexity of the modelled biological systems and the growing number and size of the models calls for computer support for modelling and simulation in Systems Biology. This computer support has to be based on formal representations of relevant knowledge fragments. In this paper we describe different functional aspects of dynamic models. This description is conceptually embedded in our "meaning facets" framework which systematises the interpretation of dynamic models in structural, functional and behavioural facets. Here we focus on how function links the structure and the behaviour of a model. Models play a specific role (teleological function) in the scientific process of finding explanations for dynamic phenomena. In order to fulfil this role a model has to be used in simulation experiments (pragmatical function). A simulation experiment always refers to a specific situation and a state of the model and the modelled system (conditional function). We claim that the function of dynamic models refers to both the simulation experiment executed by software (intrinsic function) and the biological experiment which produces the phenomena under investigation (extrinsic function). We use the presented conceptual framework for the function of dynamic models to review formal accounts for functional aspects of models in Systems Biology, such as checklists, ontologies, and formal languages. Furthermore, we identify missing formal accounts for some of the functional aspects. In order to fill one of these gaps we propose an ontology for the teleological function of models. We have thoroughly analysed the role and use of models in Systems Biology. The resulting conceptual framework for the function of models is an important first step towards a comprehensive formal representation of the functional knowledge involved in the modelling and simulation process

Quantitative software-reliability analysis of computer codes relevant to nuclear safety

International Nuclear Information System (INIS)

Mueller, C.J.

1981-12-01

This report presents the results of the first year of an ongoing research program to determine the probability of failure characteristics of computer codes relevant to nuclear safety. An introduction to both qualitative and quantitative aspects of nuclear software is given. A mathematical framework is presented which will enable the a priori prediction of the probability of failure characteristics of a code given the proper specification of its properties. The framework consists of four parts: (1) a classification system for software errors and code failures; (2) probabilistic modeling for selected reliability characteristics; (3) multivariate regression analyses to establish predictive relationships among reliability characteristics and generic code property and development parameters; and (4) the associated information base. Preliminary data of the type needed to support the modeling and the predictions of this program are described. Illustrations of the use of the modeling are given but the results so obtained, as well as all results of code failure probabilities presented herein, are based on data which at this point are preliminary, incomplete, and possibly non-representative of codes relevant to nuclear safety

Model-based analysis of digital radio frequency control systems for a heavy-ion synchrotron

International Nuclear Information System (INIS)

Spies, Christopher

2013-12-01

In this thesis, we investigate the behavior of different radio frequency control systems in a heavy-ion synchrotron, which act on the electrical fields used to accelerate charged particles, along with the longitudinal dynamics of the particles in the beam. Due to the large physical dimensions of the system, the required precision can only be achieved by a distributed control system. Since the plant is highly nonlinear and the overall system is very complex, a purely analytical treatment is not possible without introducing unacceptable simplifications. Instead, we use numerical simulation to investigate the system behavior. This thesis arises from a cooperation between the Institute of Microelectronic Systems at Technische Universitaet Darmstadt and the GSI Helmholtz Center for Heavy-Ion Research. A new heavy-ion synchrotron, the SIS100, is currently being built at GSI; its completion is scheduled for 2016. The starting point for the present thesis was the question whether a control concept previously devised at GSI is feasible - not only in the ideal case, but in the presence of parameter deviations, noise, and other disturbances - and how it can be optimized. In this thesis, we present a system model of a heavy-ion synchrotron. This model comprises the beam dynamics, the relevant components of the accelerator, and the relevant controllers as well as the communication between those controllers. We discuss the simulation techniques as well as several simplifications we applied in order to be able to simulate the model in an acceptable amount of time and show that these simplifications are justified. Using the model, we conducted several case studies in order to demonstrate the practical feasibility of the control concept, analyze the system's sensitivity towards disturbances and explore opportunities for future extensions. We derive specific suggestions for improvements from our results. Finally, we demonstrate that the model represents the physical reality

The SADI Personal Health Lens: A Web Browser-Based System for Identifying Personally Relevant Drug Interactions.

Science.gov (United States)

Vandervalk, Ben; McCarthy, E Luke; Cruz-Toledo, José; Klein, Artjom; Baker, Christopher J O; Dumontier, Michel; Wilkinson, Mark D

2013-04-05

The Web provides widespread access to vast quantities of health-related information that can improve quality-of-life through better understanding of personal symptoms, medical conditions, and available treatments. Unfortunately, identifying a credible and personally relevant subset of information can be a time-consuming and challenging task for users without a medical background. The objective of the Personal Health Lens system is to aid users when reading health-related webpages by providing warnings about personally relevant drug interactions. More broadly, we wish to present a prototype for a novel, generalizable approach to facilitating interactions between a patient, their practitioner(s), and the Web. We utilized a distributed, Semantic Web-based architecture for recognizing personally dangerous drugs consisting of: (1) a private, local triple store of personal health information, (2) Semantic Web services, following the Semantic Automated Discovery and Integration (SADI) design pattern, for text mining and identifying substance interactions, (3) a bookmarklet to trigger analysis of a webpage and annotate it with personalized warnings, and (4) a semantic query that acts as an abstract template of the analytical workflow to be enacted by the system. A prototype implementation of the system is provided in the form of a Java standalone executable JAR file. The JAR file bundles all components of the system: the personal health database, locally-running versions of the SADI services, and a javascript bookmarklet that triggers analysis of a webpage. In addition, the demonstration includes a hypothetical personal health profile, allowing the system to be used immediately without configuration. Usage instructions are provided. The main strength of the Personal Health Lens system is its ability to organize medical information and to present it to the user in a personalized and contextually relevant manner. While this prototype was limited to a single knowledge domain

The SADI Personal Health Lens: A Web Browser-Based System for Identifying Personally Relevant Drug Interactions

Science.gov (United States)

Vandervalk, Ben; McCarthy, E Luke; Cruz-Toledo, José; Klein, Artjom; Baker, Christopher J O; Dumontier, Michel

2013-01-01

Background The Web provides widespread access to vast quantities of health-related information that can improve quality-of-life through better understanding of personal symptoms, medical conditions, and available treatments. Unfortunately, identifying a credible and personally relevant subset of information can be a time-consuming and challenging task for users without a medical background. Objective The objective of the Personal Health Lens system is to aid users when reading health-related webpages by providing warnings about personally relevant drug interactions. More broadly, we wish to present a prototype for a novel, generalizable approach to facilitating interactions between a patient, their practitioner(s), and the Web. Methods We utilized a distributed, Semantic Web-based architecture for recognizing personally dangerous drugs consisting of: (1) a private, local triple store of personal health information, (2) Semantic Web services, following the Semantic Automated Discovery and Integration (SADI) design pattern, for text mining and identifying substance interactions, (3) a bookmarklet to trigger analysis of a webpage and annotate it with personalized warnings, and (4) a semantic query that acts as an abstract template of the analytical workflow to be enacted by the system. Results A prototype implementation of the system is provided in the form of a Java standalone executable JAR file. The JAR file bundles all components of the system: the personal health database, locally-running versions of the SADI services, and a javascript bookmarklet that triggers analysis of a webpage. In addition, the demonstration includes a hypothetical personal health profile, allowing the system to be used immediately without configuration. Usage instructions are provided. Conclusions The main strength of the Personal Health Lens system is its ability to organize medical information and to present it to the user in a personalized and contextually relevant manner. While this

Dynamic behavioural model for assessing impact of regeneration actions on system availability: Application to weapon systems

International Nuclear Information System (INIS)

Monnin, Maxime; Iung, Benoit; Senechal, Olivier

2011-01-01

Mastering system availability all along the system life cycle is now a critical issue with regards to systems engineering. It is more true for military systems which operate in a battle context. Indeed as they must act in a hostile environment, they can become unavailable due to failures of or damage to the system. In both cases, system regeneration is required to restore its availability. Many approaches based on system modelling have been developed to assess availability. However, very few of them take battlefield damage into account and relevant methods for the model development are missing. In this paper, a modelling method for architecture of weapon system of systems that supports regeneration engineering is proposed. On the one hand, this method relies on a unified failure/damage approach to extend acknowledged availability models. It allows to integrate failures, damages, as well as the possibility of regeneration, into operational availability assessment. Architectures are modelled as a set of operational functions, supported by components that belong to platform (system). Modelling atoms (i.e. elementary units of modelling) for both the architecture components and functions are defined, based on state-space formalism. Monte Carlo method is used to estimate availability through simulation. Availability of the architecture is defined on the basis of the possible states of the required functions for a mission. The states of a function directly depend on the state of the corresponding components (i.e. the components that support the function). Aggregation rules define the state of the function knowing the states of each component. Aggregation is defined by means of combinatorial equations of the component states. The modelling approach is supported by means of stochastic activity network for the models simulation. Results are analysed in terms of graphs of availability for mission's days. Thus, given the simulation results, it is possible to plan combat

The big seven model of personality and its relevance to personality pathology.

Science.gov (United States)

Simms, Leonard J

2007-02-01

Proponents of the Big Seven model of personality have suggested that Positive Valence (PV) and Negative Valence (NV) are independent of the Big Five personality dimensions and may be particularly relevant to personality disorder. These hypotheses were tested with 403 undergraduates who completed a Big Seven measure and markers of the Big Five and personality pathology. Results revealed that PV and NV incrementally predicted personality pathology dimensions beyond those predicted by multiple markers of the Big Five. However, factor analyses suggested that PV and NV might be best understood as specific, maladaptive aspects of positive emotionality and low agreeableness, respectively, as opposed to independent factors of personality. Implications for the description of normal and abnormal personality are discussed.

Nuclear models relevant to evaluation

International Nuclear Information System (INIS)

Arthur, E.D.; Chadwick, M.B.; Hale, G.M.; Young, P.G.

1991-01-01

The widespread use of nuclear models continues in the creation of data evaluations. The reasons include extension of data evaluations to higher energies, creation of data libraries for isotopic components of natural materials, and production of evaluations for radiative target species. In these cases, experimental data are often sparse or nonexistent. As this trend continues, the nuclear models employed in evaluation work move towards more microscopically-based theoretical methods, prompted in part by the availability of increasingly powerful computational resources. Advances in nuclear models applicable to evaluation will be reviewed. These include advances in optical model theory, microscopic and phenomenological state and level density theory, unified models that consistently describe both equilibrium and nonequilibrium reaction mechanism, and improved methodologies for calculation of prompt radiation from fission. 84 refs., 8 figs

SBRML: a markup language for associating systems biology data with models.

Science.gov (United States)

Dada, Joseph O; Spasić, Irena; Paton, Norman W; Mendes, Pedro

2010-04-01

Research in systems biology is carried out through a combination of experiments and models. Several data standards have been adopted for representing models (Systems Biology Markup Language) and various types of relevant experimental data (such as FuGE and those of the Proteomics Standards Initiative). However, until now, there has been no standard way to associate a model and its entities to the corresponding datasets, or vice versa. Such a standard would provide a means to represent computational simulation results as well as to frame experimental data in the context of a particular model. Target applications include model-driven data analysis, parameter estimation, and sharing and archiving model simulations. We propose the Systems Biology Results Markup Language (SBRML), an XML-based language that associates a model with several datasets. Each dataset is represented as a series of values associated with model variables, and their corresponding parameter values. SBRML provides a flexible way of indexing the results to model parameter values, which supports both spreadsheet-like data and multidimensional data cubes. We present and discuss several examples of SBRML usage in applications such as enzyme kinetics, microarray gene expression and various types of simulation results. The XML Schema file for SBRML is available at http://www.comp-sys-bio.org/SBRML under the Academic Free License (AFL) v3.0.

From research excellence to brand relevance: A model for higher education reputation building

Directory of Open Access Journals (Sweden)

Nina Overton-de Klerk

2016-05-01

Full Text Available In this article we propose a novel approach to reputation development at higher education institutions. Global reputation development at higher education institutions is largely driven by research excellence, is predominantly measured by research output, and is predominantly reflected in hierarchical university rankings. The ranking becomes equated with brand equity. We argue that the current approach to reputation development in higher education institutions is modernist and linear. This is strangely out-of-kilter with the complexities of a transforming society in flux, the demands of a diversity of stakeholders, and the drive towards transdisciplinarity, laterality, reflexivity and relevance in science. Good research clearly remains an important ingredient of a university's brand value. However, a case can be made for brand relevance, co-created in collaboration with stakeholders, as an alternative and non-linear way of differentiation. This approach is appropriate in light of challenges in strategic science globally as well as trends and shifts in the emerging paradigm of strategic communication. In applying strategic communication principles to current trends and issues in strategic science and the communication thereof, an alternative model for strategic reputation building at higher education institutions is developed.

Inverse analyses of effective diffusion parameters relevant for a two-phase moisture model of cementitious materials

DEFF Research Database (Denmark)

Addassi, Mouadh; Johannesson, Björn; Wadsö, Lars

2018-01-01

Here we present an inverse analyses approach to determining the two-phase moisture transport properties relevant to concrete durability modeling. The purposed moisture transport model was based on a continuum approach with two truly separate equations for the liquid and gas phase being connected...... test, and, (iv) capillary suction test. Mass change over time, as obtained from the drying test, the two different cup test intervals and the capillary suction test, was used to obtain the effective diffusion parameters using the proposed inverse analyses approach. The moisture properties obtained...

Model fit versus biological relevance: Evaluating photosynthesis-temperature models for three tropical seagrass species.

Science.gov (United States)

Adams, Matthew P; Collier, Catherine J; Uthicke, Sven; Ow, Yan X; Langlois, Lucas; O'Brien, Katherine R

2017-01-04

When several models can describe a biological process, the equation that best fits the data is typically considered the best. However, models are most useful when they also possess biologically-meaningful parameters. In particular, model parameters should be stable, physically interpretable, and transferable to other contexts, e.g. for direct indication of system state, or usage in other model types. As an example of implementing these recommended requirements for model parameters, we evaluated twelve published empirical models for temperature-dependent tropical seagrass photosynthesis, based on two criteria: (1) goodness of fit, and (2) how easily biologically-meaningful parameters can be obtained. All models were formulated in terms of parameters characterising the thermal optimum (T opt ) for maximum photosynthetic rate (P max ). These parameters indicate the upper thermal limits of seagrass photosynthetic capacity, and hence can be used to assess the vulnerability of seagrass to temperature change. Our study exemplifies an approach to model selection which optimises the usefulness of empirical models for both modellers and ecologists alike.

Model fit versus biological relevance: Evaluating photosynthesis-temperature models for three tropical seagrass species

Science.gov (United States)

Adams, Matthew P.; Collier, Catherine J.; Uthicke, Sven; Ow, Yan X.; Langlois, Lucas; O'Brien, Katherine R.

2017-01-01

When several models can describe a biological process, the equation that best fits the data is typically considered the best. However, models are most useful when they also possess biologically-meaningful parameters. In particular, model parameters should be stable, physically interpretable, and transferable to other contexts, e.g. for direct indication of system state, or usage in other model types. As an example of implementing these recommended requirements for model parameters, we evaluated twelve published empirical models for temperature-dependent tropical seagrass photosynthesis, based on two criteria: (1) goodness of fit, and (2) how easily biologically-meaningful parameters can be obtained. All models were formulated in terms of parameters characterising the thermal optimum (Topt) for maximum photosynthetic rate (Pmax). These parameters indicate the upper thermal limits of seagrass photosynthetic capacity, and hence can be used to assess the vulnerability of seagrass to temperature change. Our study exemplifies an approach to model selection which optimises the usefulness of empirical models for both modellers and ecologists alike.

Is sustainability achievable? Exploring the limits of sustainability with model systems.

Science.gov (United States)

Shastri, Yogendra; Diwekar, Urmila; Cabezas, Heriberto; Williamson, James

2008-09-01

Successful implementation of sustainability ideas in ecosystem management requires a basic understanding of the often nonlinear and nonintuitive relationships among different dimensions of sustainability, particularly the system-wide implications of human actions. This basic understanding further includes a sense of the time scale of possible future events and the limits of what is and is not likely to be possible. With this understanding, systematic approaches can then be used to develop policy guidelines for the system. This article presents an illustration of these ideas by analyzing an integrated ecological-economic-social model, which comprises various ecological (natural) and domesticated compartments representing species along with a macroeconomic price setting model. The stable and qualitatively realistic model is used to analyze different relevant scenarios. Apart from highlighting complex relationships within the system, it identifies potentially unsustainable future developments such as increased human per capita consumption rates. Dynamic optimization is then used to develop time-dependent policy guidelines for the unsustainable scenarios using objective functions that aim to minimize fluctuations in the system's Fisher information. The results can help to identify effective policy parameters and highlight the tradeoff between natural and domesticated compartments while managing such integrated systems. The results should also qualitatively guide further investigations in the area of system level studies and policy development.

A simple model for localized-itinerant magnetic systems: crystal field effects

International Nuclear Information System (INIS)

Iannarella, L.; Silva, X.A. da; Guimarares, A.P.

1989-01-01

The magnetic behavior of a system consisting of localized electrons coupled to conduction electrons and submitted to an axial crystral field at T=0 K is ivestigated within the framework of the molecular field approximation. An analytical ionic magnetic state equation is deduced; it shows how the magnetization depends on the model parameters (exchange, crystal field, band occupation) and external magnetic field. A condition for the onset of spontaneous magnetic order is obtained and the ferro - and paramagnetic phases are studied. This study displays several features of real magnetic systems, including quenching or total suppression of the magnetic moments (depending on the relative value of the crystal field parameter) and exchange enhacement. The relevance of such model for the description of rare-earth intermetallic compounds is discussed. (author) [pt

Monochloramine Cometabolism by Nitrifying Biofilm Relevant ...

Science.gov (United States)

Recently, biological monochloramine removal (i.e., cometabolism) by a pure culture ammonia–oxidizing bacteria, Nitrosomonas europaea, and a nitrifying mixed–culture have been shown to increase monochloramine demand. Although important, these previous suspended culture batch kinetic experiments were not representative of drinking water distribution systems where bacteria grow predominantly as biofilm attached to pipe walls or sediments and physiological differences may exist between suspension and biofilm growth. Therefore, the current research was an important next step in extending the previous results to investigate monochloramine cometabolism by biofilm grown in annular reactors under drinking water relevant conditions. Estimated monochloramine cometabolism kinetics were similar to those of ammonia metabolism, and monochloramine cometabolism was a significant loss mechanism (25–40% of the observed monochloramine loss). These results demonstrated that monochloramine cometabolism occurred in drinking water relevant nitrifying biofilm; thus, cometabolism may be a significant contribution to monochloramine loss during nitrification episodes in distribution systems. Investigate whether or not nitrifying biofilm can biologically transform monochloramine under drinking water relevant conditions.

Application of all-relevant feature selection for the failure analysis of parameter-induced simulation crashes in climate models

Science.gov (United States)

Paja, Wiesław; Wrzesien, Mariusz; Niemiec, Rafał; Rudnicki, Witold R.

2016-03-01

Climate models are extremely complex pieces of software. They reflect the best knowledge on the physical components of the climate; nevertheless, they contain several parameters, which are too weakly constrained by observations, and can potentially lead to a simulation crashing. Recently a study by Lucas et al. (2013) has shown that machine learning methods can be used for predicting which combinations of parameters can lead to the simulation crashing and hence which processes described by these parameters need refined analyses. In the current study we reanalyse the data set used in this research using different methodology. We confirm the main conclusion of the original study concerning the suitability of machine learning for the prediction of crashes. We show that only three of the eight parameters indicated in the original study as relevant for prediction of the crash are indeed strongly relevant, three others are relevant but redundant and two are not relevant at all. We also show that the variance due to the split of data between training and validation sets has a large influence both on the accuracy of predictions and on the relative importance of variables; hence only a cross-validated approach can deliver a robust prediction of performance and relevance of variables.

Analysis and evaluation of the ASTEC model basis. Relevant experiments. Technical report

International Nuclear Information System (INIS)

Koppers, V.; Koch, M.K.

2015-12-01

The present report is a Technical Report within the research project ''ASMO'', funded by the German Federal Ministry of Economics and Technology (BMWi 1501433) and projected at the Reactor Simulation and Safety Group, Chair of Energy Systems and Energy Economics (LEE) at the Ruhr-Universitaet Bochum (RUB). The project deals with the analysis of the model basis of the Accident Source Term Evaluation Code (ASTEC). This report focuses on the containment part of ASTEC (CPA) and presents the simulation results of the experiment TH20.7. The experimental series TH20 was performed in the test vessel THAI (Thermal-hydraulics, Aerosols, Iodine) to investigate the erosion of a helium layer by a blower generated air jet. Helium is used as a substitute for hydrogen. In the experiment TH20.7 a light-gas layer is established and eroded by a momentum driven jet. The simulation of momentum driven jets is challenging for CPA because there is no model to simulate the kinetic momentum transfer. Subject of this report is the analysis of the capability of the code with the current model basis to model momentum driven phenomena. The jet is modelled using virtual ventilation systems, so called FAN-Systems. The FAN-Systems are adapted to the erosion velocity. The simulation results are compared to the experimental results and a basic calculation using FAN-Systems without any adjustments. For further improvement, different variation calculations are performed. At first, the vertical nodalization is refined. Subsequently, the resistance coefficients are adjusted to support the jet flow pattern and the number of the FAN-Systems is reduced. The analysis shows that the simulation of a momentum driven light-gas layer erosion is possible using adjusted FAN-Systems. A fine selected vertical nodalization and adaption of the resistance coefficients improves the simulation results.

Lab-on-a-brane: A novel physiologically relevant planar arterial model to study transendothelial transport

Science.gov (United States)

Budhwani, Karim Ismail

The tremendous quality of life impact notwithstanding, cardiovascular diseases and Cancer add up to over US$ 700bn each year in financial costs alone. Aging and population growth are expected to further expand the problem space while drug research and development remain expensive. However, preclinical costs can be substantially mitigated by substituting animal models with in vitro devices that accurately model human cardiovascular transport. Here we present a novel physiologically relevant lab-on-a-brane that simulates in vivo pressure, flow, strain, and shear waveforms associated with normal and pathological conditions in large and small blood vessels for studying molecular transport across the endothelial monolayer. The device builds upon previously demonstrated integrated microfluidic loop design by: (a) introducing nanoscale pores in the substrate membrane to enable transmembrane molecular transport, (b) transforming the substrate membrane into a nanofibrous matrix for 3D smooth muscle cell (SMC) tissue culture, (c) integrating electrospinning fabrication methods, (d) engineering an invertible sandwich cell culture device architecture, and (e) devising a healthy co-culture mechanism for human arterial endothelial cell (HAEC) monolayer and multiple layers of human smooth muscle cells (HSMC) to accurately mimic arterial anatomy. Structural and mechanical characterization was conducted using confocal microscopy, SEM, stress/strain analysis, and infrared spectroscopy. Transport was characterized using FITC-Dextran hydraulic permeability protocol. Structure and transport characterization successfully demonstrate device viability as a physiologically relevant arterial mimic for testing transendothelial transport. Thus, our lab-on-a-brane provides a highly effective and efficient, yet considerably inexpensive, physiologically relevant alternative for pharmacokinetic evaluation; possibly reducing animals used in pre-clinical testing, clinical trials cost from false

Systematic Assessment of Neutron and Gamma Backgrounds Relevant to Operational Modeling and Detection Technology Implementation

Energy Technology Data Exchange (ETDEWEB)

Archer, Daniel E. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Hornback, Donald Eric [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Johnson, Jeffrey O. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Nicholson, Andrew D. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Patton, Bruce W. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Peplow, Douglas E. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Miller, Thomas Martin [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Ayaz-Maierhafer, Birsen [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)

2015-01-01

This report summarizes the findings of a two year effort to systematically assess neutron and gamma backgrounds relevant to operational modeling and detection technology implementation. The first year effort focused on reviewing the origins of background sources and their impact on measured rates in operational scenarios of interest. The second year has focused on the assessment of detector and algorithm performance as they pertain to operational requirements against the various background sources and background levels.

A long-term three dimensional liver co-culture system for improved prediction of clinically relevant drug-induced hepatotoxicity

International Nuclear Information System (INIS)

Kostadinova, Radina; Boess, Franziska; Applegate, Dawn; Suter, Laura; Weiser, Thomas; Singer, Thomas; Naughton, Brian; Roth, Adrian

2013-01-01

Drug-induced liver injury (DILI) is the major cause for liver failure and post-marketing drug withdrawals. Due to species-specific differences in hepatocellular function, animal experiments to assess potential liabilities of drug candidates can predict hepatotoxicity in humans only to a certain extent. In addition to animal experimentation, primary hepatocytes from rat or human are widely used for pre-clinical safety assessment. However, as many toxic responses in vivo are mediated by a complex interplay among different cell types and often require chronic drug exposures, the predictive performance of hepatocytes is very limited. Here, we established and characterized human and rat in vitro three-dimensional (3D) liver co-culture systems containing primary parenchymal and non-parenchymal hepatic cells. Our data demonstrate that cells cultured on a 3D scaffold have a preserved composition of hepatocytes, stellate, Kupffer and endothelial cells and maintain liver function for up to 3 months, as measured by the production of albumin, fibrinogen, transferrin and urea. Additionally, 3D liver co-cultures maintain cytochrome P450 inducibility, form bile canaliculi-like structures and respond to inflammatory stimuli. Upon incubation with selected hepatotoxicants including drugs which have been shown to induce idiosyncratic toxicity, we demonstrated that this model better detected in vivo drug-induced toxicity, including species-specific drug effects, when compared to monolayer hepatocyte cultures. In conclusion, our results underline the importance of more complex and long lasting in vitro cell culture models that contain all liver cell types and allow repeated drug-treatments for detection of in vivo-relevant adverse drug effects. - Highlights: ► 3D liver co-cultures maintain liver specific functions for up to three months. ► Activities of Cytochrome P450s remain drug- inducible accross three months. ► 3D liver co-cultures recapitulate drug-induced liver toxicity

A long-term three dimensional liver co-culture system for improved prediction of clinically relevant drug-induced hepatotoxicity

Energy Technology Data Exchange (ETDEWEB)

Kostadinova, Radina; Boess, Franziska [Non-Clinical Safety, Hoffmann-La Roche Ltd, Grenzacherstrasse 124, Building 73 / Room 117b, 4070 Basel (Switzerland); Applegate, Dawn [RegeneMed, 9855 Towne Centre Drive Suite 200, San Diego, CA 92121 (United States); Suter, Laura; Weiser, Thomas; Singer, Thomas [Non-Clinical Safety, Hoffmann-La Roche Ltd, Grenzacherstrasse 124, Building 73 / Room 117b, 4070 Basel (Switzerland); Naughton, Brian [RegeneMed, 9855 Towne Centre Drive Suite 200, San Diego, CA 92121 (United States); Roth, Adrian, E-mail: adrian_b.roth@roche.com [Non-Clinical Safety, Hoffmann-La Roche Ltd, Grenzacherstrasse 124, Building 73 / Room 117b, 4070 Basel (Switzerland)

2013-04-01

Drug-induced liver injury (DILI) is the major cause for liver failure and post-marketing drug withdrawals. Due to species-specific differences in hepatocellular function, animal experiments to assess potential liabilities of drug candidates can predict hepatotoxicity in humans only to a certain extent. In addition to animal experimentation, primary hepatocytes from rat or human are widely used for pre-clinical safety assessment. However, as many toxic responses in vivo are mediated by a complex interplay among different cell types and often require chronic drug exposures, the predictive performance of hepatocytes is very limited. Here, we established and characterized human and rat in vitro three-dimensional (3D) liver co-culture systems containing primary parenchymal and non-parenchymal hepatic cells. Our data demonstrate that cells cultured on a 3D scaffold have a preserved composition of hepatocytes, stellate, Kupffer and endothelial cells and maintain liver function for up to 3 months, as measured by the production of albumin, fibrinogen, transferrin and urea. Additionally, 3D liver co-cultures maintain cytochrome P450 inducibility, form bile canaliculi-like structures and respond to inflammatory stimuli. Upon incubation with selected hepatotoxicants including drugs which have been shown to induce idiosyncratic toxicity, we demonstrated that this model better detected in vivo drug-induced toxicity, including species-specific drug effects, when compared to monolayer hepatocyte cultures. In conclusion, our results underline the importance of more complex and long lasting in vitro cell culture models that contain all liver cell types and allow repeated drug-treatments for detection of in vivo-relevant adverse drug effects. - Highlights: ► 3D liver co-cultures maintain liver specific functions for up to three months. ► Activities of Cytochrome P450s remain drug- inducible accross three months. ► 3D liver co-cultures recapitulate drug-induced liver toxicity

INFORMATION MODEL OF MAJOR DEPRESSION TREATMENT COST - RELEVANCE OF QUALITY MANAGEMENT OF HEALTH SYSTEM

Directory of Open Access Journals (Sweden)

Danijela Tadić

2010-09-01

Full Text Available This paper develops multirelational data base for major depression costs. It lists how data are collected and stored into the fact base and dimension base. Uncertain data is described linguistically and modelled by fuzzy sets. Linguistic expressions are stored in dimension base. Models of major depression treatment costs are developed for each patient and all population. On the basis of this model and multirelational data base MD-OLAP a model for major depression treatment costs is developed.

The Limits to Relevance

Science.gov (United States)

Averill, M.; Briggle, A.

2006-12-01

Science policy and knowledge production lately have taken a pragmatic turn. Funding agencies increasingly are requiring scientists to explain the relevance of their work to society. This stems in part from mounting critiques of the "linear model" of knowledge production in which scientists operating according to their own interests or disciplinary standards are presumed to automatically produce knowledge that is of relevance outside of their narrow communities. Many contend that funded scientific research should be linked more directly to societal goals, which implies a shift in the kind of research that will be funded. While both authors support the concept of useful science, we question the exact meaning of "relevance" and the wisdom of allowing it to control research agendas. We hope to contribute to the conversation by thinking more critically about the meaning and limits of the term "relevance" and the trade-offs implicit in a narrow utilitarian approach. The paper will consider which interests tend to be privileged by an emphasis on relevance and address issues such as whose goals ought to be pursued and why, and who gets to decide. We will consider how relevance, narrowly construed, may actually limit the ultimate utility of scientific research. The paper also will reflect on the worthiness of research goals themselves and their relationship to a broader view of what it means to be human and to live in society. Just as there is more to being human than the pragmatic demands of daily life, there is more at issue with knowledge production than finding the most efficient ways to satisfy consumer preferences or fix near-term policy problems. We will conclude by calling for a balanced approach to funding research that addresses society's most pressing needs but also supports innovative research with less immediately apparent application.

[work motivation -- assessment instruments and their relevance for medical care].

Science.gov (United States)

Fiedler, Rolf G; Ranft, Andreas; Greitemann, Bernhard; Heuft, Gereon

2005-11-01

The relevance of work motivation for medical research and healthcare, in particular rehabilitation, is described. Four diagnostic instruments in the German language are introduced which can assess work motivation using a scale system: AVEM, JDS, LMI and FBTM. Their possible application and potential usage for the clinical area are discussed. Apart from the FBTM, none of these instruments can be directly used as a general instrument in a normal medical clinical setting. Finally, a current model for work motivation (compensatory model of work motivation and volition) is presented that contains basis concepts, which are judged as important for future research questions concerning the development of motivation diagnostic instruments.

SysBioCube: A Data Warehouse and Integrative Data Analysis Platform Facilitating Systems Biology Studies of Disorders of Military Relevance.

Science.gov (United States)

Chowbina, Sudhir; Hammamieh, Rasha; Kumar, Raina; Chakraborty, Nabarun; Yang, Ruoting; Mudunuri, Uma; Jett, Marti; Palma, Joseph M; Stephens, Robert

2013-01-01

SysBioCube is an integrated data warehouse and analysis platform for experimental data relating to diseases of military relevance developed for the US Army Medical Research and Materiel Command Systems Biology Enterprise (SBE). It brings together, under a single database environment, pathophysio-, psychological, molecular and biochemical data from mouse models of post-traumatic stress disorder and (pre-) clinical data from human PTSD patients.. SysBioCube will organize, centralize and normalize this data and provide an access portal for subsequent analysis to the SBE. It provides new or expanded browsing, querying and visualization to provide better understanding of the systems biology of PTSD, all brought about through the integrated environment. We employ Oracle database technology to store the data using an integrated hierarchical database schema design. The web interface provides researchers with systematic information and option to interrogate the profiles of pan-omics component across different data types, experimental designs and other covariates.

A Tissue Relevance and Meshing Method for Computing Patient-Specific Anatomical Models in Endoscopic Sinus Surgery Simulation

Science.gov (United States)

Audette, M. A.; Hertel, I.; Burgert, O.; Strauss, G.

This paper presents on-going work on a method for determining which subvolumes of a patient-specific tissue map, extracted from CT data of the head, are relevant to simulating endoscopic sinus surgery of that individual, and for decomposing these relevant tissues into triangles and tetrahedra whose mesh size is well controlled. The overall goal is to limit the complexity of the real-time biomechanical interaction while ensuring the clinical relevance of the simulation. Relevant tissues are determined as the union of the pathology present in the patient, of critical tissues deemed to be near the intended surgical path or pathology, and of bone and soft tissue near the intended path, pathology or critical tissues. The processing of tissues, prior to meshing, is based on the Fast Marching method applied under various guises, in a conditional manner that is related to tissue classes. The meshing is based on an adaptation of a meshing method of ours, which combines the Marching Tetrahedra method and the discrete Simplex mesh surface model to produce a topologically faithful surface mesh with well controlled edge and face size as a first stage, and Almost-regular Tetrahedralization of the same prescribed mesh size as a last stage.

Model for spatial synthesis of automated control system of the GCR type reactor; Model za prostornu sintezu sistema automatskog upravljanja reaktora GCR tipa

Energy Technology Data Exchange (ETDEWEB)

Lazarevic, B; Matausek, M [Institut za nuklearne nauke ' Boris Kidric' , Vinca, Belgrade (Yugoslavia)

1966-07-01

This paper describes the model which was developed for synthesis of spatial distribution of automated control elements in the reactor. It represents a general reliable mathematical model for analyzing transition states and synthesis of the automated control and regulation systems of GCR type reactors. One-dimensional system was defined under assumption that the time dependence of parameters of the neutron diffusion equation are identical in the total volume of the reactor and that spatial distribution of neutrons is time independent. It is shown that this assumption is satisfactory in case of short term variations which are relevant for safety analysis.

Protection of safety-relevant information in distributed energy information systems; Schutz sicherheitsrelevanter Informationen in verteilten Energieinformationssystemen

Energy Technology Data Exchange (ETDEWEB)

Beenken, Petra

2010-07-01

encryption systems and a corresponding separated and decentralized key management. The ENERTRUST security model allows people to identify their security relevant data and the need of protection of this data by reasoning. Moreover it allows people to make a definition of a suitable - that means a conflict free - protection measurement as an encryption system. Furthermore the security model mentions authentification operations for a secure key exchange and the model gives an opportunity to find out which subjects need an access to which energy data.

Towards and Effective Financial Management: Relevance of Dividend Discount Model in Stock Price Valuation

Directory of Open Access Journals (Sweden)

Ana Mugoša

2015-06-01

Full Text Available The aim of this paper is to analyze the relevance of dividend discount model, i.e. its specific form in stock price estimation known as Gordon growth model. The expected dividends can be a measure of cash flows returned to the stockholder. In this context, the model is useful for assessment of how risk factors, such as interest rates and changing inflation rates, affect stock returns. This is especially important in case when investors are value oriented, i.e. when expected dividends are theirmain investing drivers. We compared the estimated with the actual stock price values and tested the statistical significance of price differences in 199 publicly traded European companies for the period2010-2013. Statistical difference between pairs of price series (actual and estimated was tested using Wilcoxon and Kruskal-Wallis tests of median and distribution equality. The hypothesis that Gordon growth model cannot be reliable measure of stock price valuation on European equity market over period of 2010-2013 due to influence of the global financial crisis was rejected with 95% confidence. Gordon growth model has proven to be reliable measure of stock price valuation even over period of strong global financial crisis influence.

Magnetic anisotropy in the Kitaev model systems Na2IrO3 and RuCl3

Science.gov (United States)

Chaloupka, Jiří; Khaliullin, Giniyat

2016-08-01

We study the ordered moment direction in the extended Kitaev-Heisenberg model relevant to honeycomb lattice magnets with strong spin-orbit coupling. We utilize numerical diagonalization and analyze the exact cluster ground states using a particular set of spin-coherent states, obtaining thereby quantum corrections to the magnetic anisotropy beyond conventional perturbative methods. It is found that the quantum fluctuations strongly modify the moment direction obtained at a classical level and are thus crucial for a precise quantification of the interactions. The results show that the moment direction is a sensitive probe of the model parameters in real materials. Focusing on the experimentally relevant zigzag phases of the model, we analyze the currently available neutron-diffraction and resonant x-ray-diffraction data on Na2IrO3 and RuCl3 and discuss the parameter regimes plausible in these Kitaev-Heisenberg model systems.

Towards a systems approach for understanding honeybee decline: a stocktaking and synthesis of existing models.

Science.gov (United States)

Becher, Matthias A; Osborne, Juliet L; Thorbek, Pernille; Kennedy, Peter J; Grimm, Volker

2013-08-01

The health of managed and wild honeybee colonies appears to have declined substantially in Europe and the United States over the last decade. Sustainability of honeybee colonies is important not only for honey production, but also for pollination of crops and wild plants alongside other insect pollinators. A combination of causal factors, including parasites, pathogens, land use changes and pesticide usage, are cited as responsible for the increased colony mortality.However, despite detailed knowledge of the behaviour of honeybees and their colonies, there are no suitable tools to explore the resilience mechanisms of this complex system under stress. Empirically testing all combinations of stressors in a systematic fashion is not feasible. We therefore suggest a cross-level systems approach, based on mechanistic modelling, to investigate the impacts of (and interactions between) colony and land management.We review existing honeybee models that are relevant to examining the effects of different stressors on colony growth and survival. Most of these models describe honeybee colony dynamics, foraging behaviour or honeybee - varroa mite - virus interactions.We found that many, but not all, processes within honeybee colonies, epidemiology and foraging are well understood and described in the models, but there is no model that couples in-hive dynamics and pathology with foraging dynamics in realistic landscapes. Synthesis and applications . We describe how a new integrated model could be built to simulate multifactorial impacts on the honeybee colony system, using building blocks from the reviewed models. The development of such a tool would not only highlight empirical research priorities but also provide an important forecasting tool for policy makers and beekeepers, and we list examples of relevant applications to bee disease and landscape management decisions.

A robot conditioned reflex system modeled after the cerebellum.

Science.gov (United States)

Albus, J. S.

1972-01-01

Reduction of a theory of cerebellar function to computer software for the control of a mechanical manipulator. This reduction is achieved by considering the cerebellum, along with the higher-level brain centers which control it, as a type of finite-state machine with input entering the cerebellum via mossy fibers from the periphery and output from the cerebellum occurring via Purkinje cells. It is hypothesized that the cerebellum learns by an error-correction system similar to Perceptron training algorithms. An electromechanical model of the cerebellum is then developed for the control of a mechanical arm. The problem of modeling the granular layer which selects the set of parallel fibers which are active at any instant of time is considered, and a relevance matrix is constructed to model the relative degree of influence which mossy fibers from the various joints have on the sets of granule cells unique to each joint.

Modeling Phase Equilibria for Acid Gas Mixtures using the Cubic-Plus-Association Equation of State. 3. Applications Relevant to Liquid or Supercritical CO2 Transport

DEFF Research Database (Denmark)

Tsivintzelis, Ioannis; Ali, Shahid; Kontogeorgis, Georgios

2014-01-01

density data for both CO2 and CO2–water and for vapor–liquid equilibrium for mixtures of CO2 with various compounds present in transport systems. In all of these cases we consider various possibilities for modeling CO2 (inert, self-associating using two-, three-, and four sites) and the possibility......The CPA (cubic-plus-association) equation of state is applied in this work to a wide range of systems of relevance to CO2 transport. Both phase equilibria and densities over extensive temperature and pressure ranges are considered. More specifically in this study we first evaluate CPA against......” for applying CPA to acid gas mixtures. The overall conclusion is that CPA performs satisfactorily; the model in most cases correlates well binary data and predicts with good accuracy multicomponent vapor–liquid equilibria. Among the various approaches investigated, the best ones are when cross association...

Modelling of interplanetary pickup ion fluxes and relevance for LISM parameters

International Nuclear Information System (INIS)

Fahr, H.J.; Rucinski, D.

1989-01-01

It has been known for many years that neutral interstellar atoms enter the solar system from the upwind side and penetrate deep into the inner heliosphere. Helium atoms, in particular, advance towards very small solar distances before they are ionized and then again convected as He - pickup ions outwards with the solar wind. Since these ions were recently detected in space, we concentrate here on calculations of He + production rates and He + fluxes. It is shown that inside 1 a.u., the He - production is essentially determined both by solar e.u.v. photoionization and by electron impact ionization. We calculate He + production rates as a function of space coordinates, taking into account the core-halo structure of the energy distribution of solar wind electrons and their temperature distribution with distance according to relevant solar wind models. For this purpose, a newly developed program to compute He densities was used. In contrast to the production of H + , the He - production rates are found to be higher on the downwind axis than on the upwind axis by a factor of 5. We also determine partial and total He + ion fluxes as a function of solar distance and longitude. It is interesting to note that only the values for total fluxes agree well with the integrated He + fluxes measured by the SULEICA experiment aboard the AMPTE satellite. This indicates that pickup ions under the influence of the intrinsic MHD wave turbulence in the solar wind change their primary seed distribution function by rapid pitch-angle scattering and subsequent adiabatic cooling. To interpret the He + intensity profile along the orbit of the Earth in terms of LISM helium parameters, we point to the need to take into account carefully electron impact ionization in order to prevent misinterpretations. (author)

Effect of nonlinear void reactivity on bifurcation characteristics of a lumped-parameter model of a BWR: A study relevant to RBMK

Energy Technology Data Exchange (ETDEWEB)

Verma, Dinkar, E-mail: dinkar@iitk.ac.in [Nuclear Engineering and Technology Program, Indian Institute of Technology Kanpur, Kanpur 208 016 (India); Kalra, Manjeet Singh, E-mail: drmanjeet.singh@dituniversity.edu.in [DIT University, Dehradun 248 009 (India); Wahi, Pankaj, E-mail: wahi@iitk.ac.in [Department of Mechanical Engineering, Indian Institute of Technology Kanpur, Kanpur 208 016 (India)

2017-04-15

Highlights: • A simplified model with nonlinear void reactivity feedback is studied. • Method of multiple scales for nonlinear analysis and oscillation characteristics. • Second order void reactivity dominates in determining system dynamics. • Opposing signs of linear and quadratic void reactivity enhances global safety. - Abstract: In the present work, the effect of nonlinear void reactivity on the dynamics of a simplified lumped-parameter model for a boiling water reactor (BWR) is investigated. A mathematical model of five differential equations comprising of neutronics and thermal-hydraulics encompassing the nonlinearities associated with both the reactivity feedbacks and the heat transfer process has been used. To this end, we have considered parameters relevant to RBMK for which the void reactivity is known to be nonlinear. A nonlinear analysis of the model exploiting the method of multiple time scales (MMTS) predicts the occurrence of the two types of Hopf bifurcation, namely subcritical and supercritical, leading to the evolution of limit cycles for a range of parameters. Numerical simulations have been performed to verify the analytical results obtained by MMTS. The study shows that the nonlinear reactivity has a significant influence on the system dynamics. A parametric study with varying nominal reactor power and operating conditions in coolant channel has also been performed which shows the effect of change in concerned parameter on the boundary between regions of sub- and super-critical Hopf bifurcations in the space constituted by the two coefficients of reactivities viz. the void and the Doppler coefficient of reactivities. In particular, we find that introduction of a negative quadratic term in the void reactivity feedback significantly increases the supercritical region and dominates in determining the system dynamics.

Business model design for a wearable biofeedback system.

Science.gov (United States)

Hidefjäll, Patrik; Titkova, Dina

2015-01-01

Wearable sensor technologies used to track daily activities have become successful in the consumer market. In order for wearable sensor technology to offer added value in the more challenging areas of stress-rehab care and occupational health stress-related biofeedback parameters need to be monitored and more elaborate business models are needed. To identify probable success factors for a wearable biofeedback system (Affective Health) in the two mentioned market segments in a Swedish setting, we conducted literature studies and interviews with relevant representatives. Data were collected and used first to describe the two market segments and then to define likely feasible business model designs, according to the Business Model Canvas framework. Needs of stakeholders were identified as inputs to business model design. Value propositions, a key building block of a business model, were defined for each segment. The value proposition for occupational health was defined as "A tool that can both identify employees at risk of stress-related disorders and reinforce healthy sustainable behavior" and for healthcare as: "Providing therapists with objective data about the patient's emotional state and motivating patients to better engage in the treatment process".

Decision analysis and risk models for land development affecting infrastructure systems.

Science.gov (United States)

Thekdi, Shital A; Lambert, James H

2012-07-01

Coordination and layering of models to identify risks in complex systems such as large-scale infrastructure of energy, water, and transportation is of current interest across application domains. Such infrastructures are increasingly vulnerable to adjacent commercial and residential land development. Land development can compromise the performance of essential infrastructure systems and increase the costs of maintaining or increasing performance. A risk-informed approach to this topic would be useful to avoid surprise, regret, and the need for costly remedies. This article develops a layering and coordination of models for risk management of land development affecting infrastructure systems. The layers are: system identification, expert elicitation, predictive modeling, comparison of investment alternatives, and implications of current decisions for future options. The modeling layers share a focus on observable factors that most contribute to volatility of land development and land use. The relevant data and expert evidence include current and forecasted growth in population and employment, conservation and preservation rules, land topography and geometries, real estate assessments, market and economic conditions, and other factors. The approach integrates to a decision framework of strategic considerations based on assessing risk, cost, and opportunity in order to prioritize needs and potential remedies that mitigate impacts of land development to the infrastructure systems. The approach is demonstrated for a 5,700-mile multimodal transportation system adjacent to 60,000 tracts of potential land development. © 2011 Society for Risk Analysis.

Comparative analysis of three drug-drug interaction screening systems against probable clinically relevant drug-drug interactions: a prospective cohort study.

Science.gov (United States)

Muhič, Neža; Mrhar, Ales; Brvar, Miran

2017-07-01

Drug-drug interaction (DDI) screening systems report potential DDIs. This study aimed to find the prevalence of probable DDI-related adverse drug reactions (ADRs) and compare the clinical usefulness of different DDI screening systems to prevent or warn against these ADRs. A prospective cohort study was conducted in patients urgently admitted to medical departments. Potential DDIs were checked using Complete Drug Interaction®, Lexicomp® Online™, and Drug Interaction Checker®. The study team identified the patients with probable clinically relevant DDI-related ADRs on admission, the causality of which was assessed using the Drug Interaction Probability Scale (DIPS). Sensitivity, specificity, and positive and negative predictive values of screening systems to prevent or warn against probable DDI-related ADRs were evaluated. Overall, 50 probable clinically relevant DDI-related ADRs were found in 37 out of 795 included patients taking at least two drugs, most common of them were bleeding, hyperkalemia, digitalis toxicity, and hypotension. Complete Drug Interaction showed the best sensitivity (0.76) for actual DDI-related ADRs, followed by Lexicomp Online (0.50), and Drug Interaction Checker (0.40). Complete Drug Interaction and Drug Interaction Checker had positive predictive values of 0.07; Lexicomp Online had 0.04. We found no difference in specificity and negative predictive values among these systems. DDI screening systems differ significantly in their ability to detect probable clinically relevant DDI-related ADRs in terms of sensitivity and positive predictive value.

User Interaction Modeling and Profile Extraction in Interactive Systems: A Groupware Application Case Study †

Science.gov (United States)

Tîrnăucă, Cristina; Duque, Rafael; Montaña, José L.

2017-01-01

A relevant goal in human–computer interaction is to produce applications that are easy to use and well-adjusted to their users’ needs. To address this problem it is important to know how users interact with the system. This work constitutes a methodological contribution capable of identifying the context of use in which users perform interactions with a groupware application (synchronous or asynchronous) and provides, using machine learning techniques, generative models of how users behave. Additionally, these models are transformed into a text that describes in natural language the main characteristics of the interaction of the users with the system. PMID:28726762

Relevance Feedback in Content Based Image Retrieval: A Review

Directory of Open Access Journals (Sweden)

Manesh B. Kokare

2011-01-01

Full Text Available This paper provides an overview of the technical achievements in the research area of relevance feedback (RF in content-based image retrieval (CBIR. Relevance feedback is a powerful technique in CBIR systems, in order to improve the performance of CBIR effectively. It is an open research area to the researcher to reduce the semantic gap between low-level features and high level concepts. The paper covers the current state of art of the research in relevance feedback in CBIR, various relevance feedback techniques and issues in relevance feedback are discussed in detail.

More Realistic Face Model Surface Improves Relevance of Pediatric In-Vitro Aerosol Studies.

Science.gov (United States)

Amirav, Israel; Halamish, Asaf; Gorenberg, Miguel; Omar, Hamza; Newhouse, Michael T

2015-01-01

Various hard face models are commonly used to evaluate the efficiency of aerosol face masks. Softer more realistic "face" surface materials, like skin, deform upon mask application and should provide more relevant in-vitro tests. Studies that simultaneously take into consideration many of the factors characteristic of the in vivo face are lacking. These include airways, various application forces, comparison of various devices, comparison with a hard-surface model and use of a more representative model face based on large numbers of actual faces. To compare mask to "face" seal and aerosol delivery of two pediatric masks using a soft vs. a hard, appropriately representative, pediatric face model under various applied forces. Two identical face models and upper airways replicas were constructed, the only difference being the suppleness and compressibility of the surface layer of the "face." Integrity of the seal and aerosol delivery of two different masks [AeroChamber (AC) and SootherMask (SM)] were compared using a breath simulator, filter collection and realistic applied forces. The soft "face" significantly increased the delivery efficiency and the sealing characteristics of both masks. Aerosol delivery with the soft "face" was significantly greater for the SM compared to the AC (pmasks was observed with the hard "face." The material and pliability of the model "face" surface has a significant influence on both the seal and delivery efficiency of face masks. This finding should be taken into account during in-vitro aerosol studies.

Application of mathematical modeling in sustained release delivery systems.

Science.gov (United States)

Grassi, Mario; Grassi, Gabriele

2014-08-01

This review, presenting as starting point the concept of the mathematical modeling, is aimed at the physical and mathematical description of the most important mechanisms regulating drug delivery from matrix systems. The precise knowledge of the delivery mechanisms allows us to set up powerful mathematical models which, in turn, are essential for the design and optimization of appropriate drug delivery systems. The fundamental mechanisms for drug delivery from matrices are represented by drug diffusion, matrix swelling, matrix erosion, drug dissolution with possible recrystallization (e.g., as in the case of amorphous and nanocrystalline drugs), initial drug distribution inside the matrix, matrix geometry, matrix size distribution (in the case of spherical matrices of different diameter) and osmotic pressure. Depending on matrix characteristics, the above-reported variables may play a different role in drug delivery; thus the mathematical model needs to be built solely on the most relevant mechanisms of the particular matrix considered. Despite the somewhat diffident behavior of the industrial world, in the light of the most recent findings, we believe that mathematical modeling may have a tremendous potential impact in the pharmaceutical field. We do believe that mathematical modeling will be more and more important in the future especially in the light of the rapid advent of personalized medicine, a novel therapeutic approach intended to treat each single patient instead of the 'average' patient.

Functional System Dynamics

NARCIS (Netherlands)

Ligterink, N.E.

2007-01-01

Functional system dynamics is the analysis, modelling, and simulation of continuous systems usually described by partial differential equations. From the infinite degrees of freedom of such systems only a finite number of relevant variables have to be chosen for a practical model description. The

A model of negotiation scenarios based on time, relevance andcontrol used to define advantageous positions in a negotiation

Directory of Open Access Journals (Sweden)

Omar Guillermo Rojas Altamirano

2016-04-01

Full Text Available Models that apply to negotiation are based on different perspectives that range from the relationship between the actors, game theory or the steps in a procedure. This research proposes a model of negotiation scenarios that considers three factors (time, relevance and control, which are displayed as the most important in a negotiation. These factors interact with each other and create different scenarios for each of the actors involved in a negotiation. The proposed model not only facilitates the creation of a negotiation strategy but also an ideal choice of effective tactics.

Sex and gonadal hormones in mouse models of Alzheimer’s disease: what is relevant to the human condition?

Directory of Open Access Journals (Sweden)

Dubal Dena B

2012-11-01

Full Text Available Abstract Biologic sex and gonadal hormones matter in human aging and diseases of aging such as Alzheimer’s – and the importance of studying their influences relates directly to human health. The goal of this article is to review the literature to date on sex and hormones in mouse models of Alzheimer’s disease (AD with an exclusive focus on interpreting the relevance of findings to the human condition. To this end, we highlight advances in AD and in sex and hormone biology, discuss what these advances mean for merging the two fields, review the current mouse model literature, raise major unresolved questions, and offer a research framework that incorporates human reproductive aging for future studies aimed at translational discoveries in this important area. Unraveling human relevant pathways in sex and hormone-based biology may ultimately pave the way to novel and urgently needed treatments for AD and other neurodegenerative diseases.

Libretexts: a flexible online open system for disseminating educational materials relevant to geophysics at all levels

Science.gov (United States)

Halpern, J. B.

2017-12-01

Libretexts is an online open system for distributing educational materials with over 5 million page views per month. Covering geophysics, chemistry, physics and more it offers a platform for authors and users including faculty and students to access curated educational materials. Currently there are on line texts covering geology, geobiology, natural hazards and understanding the refusal to accept climate change as well as relevant materials in other sections on aquatic and atmospheric chemistry. In addition to "written" materials Libretexts provides access to simulations and demonstrations that are relevant. Most importantly the Libretext project welcomes new contributors. Faculty can use available materials to construct their own texts or supplementary materials in relatively short order. Since all material is covered by a Creative Commons Copyright, material can be added to as needed for teaching.

An analytic tableaux model for Deductive Mastermind empirically tested with a massively used online learning system

NARCIS (Netherlands)

Gierasimczuk, N.; van der Maas, H.L.J.; Raijmakers, M.E.J.

2013-01-01

The paper is concerned with the psychological relevance of a logical model for deductive reasoning. We propose a new way to analyze logical reasoning in a deductive version of the Mastermind game implemented within a popular Dutch online educational learning system (Math Garden). Our main goal is to

A conscious mouse model of gastric ileus using clinically relevant endpoints

Directory of Open Access Journals (Sweden)

Shao Yuanlin

2005-06-01

Full Text Available Abstract Background Gastric ileus is an unsolved clinical problem and current treatment is limited to supportive measures. Models of ileus using anesthetized animals, muscle strips or isolated smooth muscle cells do not adequately reproduce the clinical situation. Thus, previous studies using these techniques have not led to a clear understanding of the pathophysiology of ileus. The feasibility of using food intake and fecal output as simple, clinically relevant endpoints for monitoring ileus in a conscious mouse model was evaluated by assessing the severity and time course of various insults known to cause ileus. Methods Delayed food intake and fecal output associated with ileus was monitored after intraperitoneal injection of endotoxin, laparotomy with bowel manipulation, thermal injury or cerulein induced acute pancreatitis. The correlation of decreased food intake after endotoxin injection with gastric ileus was validated by measuring gastric emptying. The effect of endotoxin on general activity level and feeding behavior was also determined. Small bowel transit was measured using a phenol red marker. Results Each insult resulted in a transient and comparable decrease in food intake and fecal output consistent with the clinical picture of ileus. The endpoints were highly sensitive to small changes in low doses of endotoxin, the extent of bowel manipulation, and cerulein dose. The delay in food intake directly correlated with delayed gastric emptying. Changes in general activity and feeding behavior were insufficient to explain decreased food intake. Intestinal transit remained unchanged at the times measured. Conclusion Food intake and fecal output are sensitive markers of gastric dysfunction in four experimental models of ileus. In the mouse, delayed gastric emptying appears to be the major cause of the anorexic effect associated with ileus. Gastric dysfunction is more important than small bowel dysfunction in this model. Recovery of

Computational Design of Short Pulse Laser Driven Iron Opacity Measurements at Stellar-Relevant Conditions

Energy Technology Data Exchange (ETDEWEB)

Martin, Madison E. [Univ. of Florida, Gainesville, FL (United States)

2017-05-20

Opacity is a critical parameter in the simulation of radiation transport in systems such as inertial con nement fusion capsules and stars. The resolution of current disagreements between solar models and helioseismological observations would bene t from experimental validation of theoretical opacity models. Overall, short pulse laser heated iron experiments reaching stellar-relevant conditions have been designed with consideration of minimizing tamper emission and optical depth effects while meeting plasma condition and x-ray emission goals.

Nutrient cycle benchmarks for earth system land model

Science.gov (United States)

Zhu, Q.; Riley, W. J.; Tang, J.; Zhao, L.

2017-12-01

Projecting future biosphere-climate feedbacks using Earth system models (ESMs) relies heavily on robust modeling of land surface carbon dynamics. More importantly, soil nutrient (particularly, nitrogen (N) and phosphorus (P)) dynamics strongly modulate carbon dynamics, such as plant sequestration of atmospheric CO2. Prevailing ESM land models all consider nitrogen as a potentially limiting nutrient, and several consider phosphorus. However, including nutrient cycle processes in ESM land models potentially introduces large uncertainties that could be identified and addressed by improved observational constraints. We describe the development of two nutrient cycle benchmarks for ESM land models: (1) nutrient partitioning between plants and soil microbes inferred from 15N and 33P tracers studies and (2) nutrient limitation effects on carbon cycle informed by long-term fertilization experiments. We used these benchmarks to evaluate critical hypotheses regarding nutrient cycling and their representation in ESMs. We found that a mechanistic representation of plant-microbe nutrient competition based on relevant functional traits best reproduced observed plant-microbe nutrient partitioning. We also found that for multiple-nutrient models (i.e., N and P), application of Liebig's law of the minimum is often inaccurate. Rather, the Multiple Nutrient Limitation (MNL) concept better reproduces observed carbon-nutrient interactions.

Relevance of the c-statistic when evaluating risk-adjustment models in surgery.

Science.gov (United States)

Merkow, Ryan P; Hall, Bruce L; Cohen, Mark E; Dimick, Justin B; Wang, Edward; Chow, Warren B; Ko, Clifford Y; Bilimoria, Karl Y

2012-05-01

The measurement of hospital quality based on outcomes requires risk adjustment. The c-statistic is a popular tool used to judge model performance, but can be limited, particularly when evaluating specific operations in focused populations. Our objectives were to examine the interpretation and relevance of the c-statistic when used in models with increasingly similar case mix and to consider an alternative perspective on model calibration based on a graphical depiction of model fit. From the American College of Surgeons National Surgical Quality Improvement Program (2008-2009), patients were identified who underwent a general surgery procedure, and procedure groups were increasingly restricted: colorectal-all, colorectal-elective cases only, and colorectal-elective cancer cases only. Mortality and serious morbidity outcomes were evaluated using logistic regression-based risk adjustment, and model c-statistics and calibration curves were used to compare model performance. During the study period, 323,427 general, 47,605 colorectal-all, 39,860 colorectal-elective, and 21,680 colorectal cancer patients were studied. Mortality ranged from 1.0% in general surgery to 4.1% in the colorectal-all group, and serious morbidity ranged from 3.9% in general surgery to 12.4% in the colorectal-all procedural group. As case mix was restricted, c-statistics progressively declined from the general to the colorectal cancer surgery cohorts for both mortality and serious morbidity (mortality: 0.949 to 0.866; serious morbidity: 0.861 to 0.668). Calibration was evaluated graphically by examining predicted vs observed number of events over risk deciles. For both mortality and serious morbidity, there was no qualitative difference in calibration identified between the procedure groups. In the present study, we demonstrate how the c-statistic can become less informative and, in certain circumstances, can lead to incorrect model-based conclusions, as case mix is restricted and patients become

Systemic resilience model

International Nuclear Information System (INIS)

Lundberg, Jonas; Johansson, Björn JE

2015-01-01

It has been realized that resilience as a concept involves several contradictory definitions, both for instance resilience as agile adjustment and as robust resistance to situations. Our analysis of resilience concepts and models suggest that beyond simplistic definitions, it is possible to draw up a systemic resilience model (SyRes) that maintains these opposing characteristics without contradiction. We outline six functions in a systemic model, drawing primarily on resilience engineering, and disaster response: anticipation, monitoring, response, recovery, learning, and self-monitoring. The model consists of four areas: Event-based constraints, Functional Dependencies, Adaptive Capacity and Strategy. The paper describes dependencies between constraints, functions and strategies. We argue that models such as SyRes should be useful both for envisioning new resilience methods and metrics, as well as for engineering and evaluating resilient systems. - Highlights: • The SyRes model resolves contradictions between previous resilience definitions. • SyRes is a core model for envisioning and evaluating resilience metrics and models. • SyRes describes six functions in a systemic model. • They are anticipation, monitoring, response, recovery, learning, self-monitoring. • The model describes dependencies between constraints, functions and strategies

A 3D dynamical model of the colliding winds in binary systems

Science.gov (United States)

Parkin, E. R.; Pittard, J. M.

2008-08-01

We present a three-dimensional (3D) dynamical model of the orbital-induced curvature of the wind-wind collision region in binary star systems. Momentum balance equations are used to determine the position and shape of the contact discontinuity between the stars, while further downstream the gas is assumed to behave ballistically. An Archimedean spiral structure is formed by the motion of the stars, with clear resemblance to high-resolution images of the so-called `pinwheel nebulae'. A key advantage of this approach over grid or smoothed particle hydrodynamic models is its significantly reduced computational cost, while it also allows the study of the structure obtained in an eccentric orbit. The model is relevant to symbiotic systems and γ-ray binaries, as well as systems with O-type and Wolf-Rayet stars. As an example application, we simulate the X-ray emission from hypothetical O+O and WR+O star binaries, and describe a method of ray tracing through the 3D spiral structure to account for absorption by the circumstellar material in the system. Such calculations may be easily adapted to study observations at wavelengths ranging from the radio to γ-ray.

Annotation and retrieval system of CAD models based on functional semantics

Science.gov (United States)

Wang, Zhansong; Tian, Ling; Duan, Wenrui

2014-11-01

CAD model retrieval based on functional semantics is more significant than content-based 3D model retrieval during the mechanical conceptual design phase. However, relevant research is still not fully discussed. Therefore, a functional semantic-based CAD model annotation and retrieval method is proposed to support mechanical conceptual design and design reuse, inspire designer creativity through existing CAD models, shorten design cycle, and reduce costs. Firstly, the CAD model functional semantic ontology is constructed to formally represent the functional semantics of CAD models and describe the mechanical conceptual design space comprehensively and consistently. Secondly, an approach to represent CAD models as attributed adjacency graphs(AAG) is proposed. In this method, the geometry and topology data are extracted from STEP models. On the basis of AAG, the functional semantics of CAD models are annotated semi-automatically by matching CAD models that contain the partial features of which functional semantics have been annotated manually, thereby constructing CAD Model Repository that supports model retrieval based on functional semantics. Thirdly, a CAD model retrieval algorithm that supports multi-function extended retrieval is proposed to explore more potential creative design knowledge in the semantic level. Finally, a prototype system, called Functional Semantic-based CAD Model Annotation and Retrieval System(FSMARS), is implemented. A case demonstrates that FSMARS can successfully botain multiple potential CAD models that conform to the desired function. The proposed research addresses actual needs and presents a new way to acquire CAD models in the mechanical conceptual design phase.

Deep learning relevance

DEFF Research Database (Denmark)

Lioma, Christina; Larsen, Birger; Petersen, Casper

2016-01-01

train a Recurrent Neural Network (RNN) on existing relevant information to that query. We then use the RNN to "deep learn" a single, synthetic, and we assume, relevant document for that query. We design a crowdsourcing experiment to assess how relevant the "deep learned" document is, compared...... to existing relevant documents. Users are shown a query and four wordclouds (of three existing relevant documents and our deep learned synthetic document). The synthetic document is ranked on average most relevant of all....

Development of a natural Gas Systems Analysis Model (GSAM)

International Nuclear Information System (INIS)

1994-02-01

Lacking a detailed characterization of the resource base and a comprehensive borehole-to-burnertip evaluation model of the North American natural gas system, past R ampersand D, tax and regulatory policies have been formulated without a full understanding of their likely direct and indirect impacts on future gas supply and demand. The recent disappearance of the deliverability surplus, pipeline deregulation, and current policy debates about regulatory initiatives in taxation, environmental compliance and leasing make the need for a comprehensive gas evaluation system critical. Traditional econometric or highly aggregated energy models are increasingly regarded as unable to incorporate available geologic detail and explicit technology performance and costing algorithms necessary to evaluate resource-technology-economic interactions in a market context. The objective of this research is to create a comprehensive, non-proprietary, microcomputer model of the North American natural gas system. GSAM explicitly evaluates the key components of the natural gas system, including resource base, exploration and development, extraction technology performance and costs, transportation and storage and end use. The primary focus is the detailed characterization of the resource base at the reservoir and sub-reservoir level and the impact of alternative extraction technologies on well productivity and economics. GSAM evaluates the complex interactions of current and alternative future technology and policy initiatives in the context of the evolving gas markets. Scheduled for completion in 1995, a prototype is planned for early 1994. ICF Resources reviewed relevant natural gas upstream, downstream and market models to identify appropriate analytic capabilities to incorporate into GSAM. We have reviewed extraction technologies to better characterize performance and costs in terms of GSAM parameters

Modeling Exoplanetary Haze and Cloud Effects for Transmission Spectroscopy in the TRAPPIST-1 System

Science.gov (United States)

Moran, Sarah E.; Horst, Sarah M.; Lewis, Nikole K.; Batalha, Natasha E.; de Wit, Julien

2018-01-01

We present theoretical transmission spectra of the planets TRAPPIST-1d, e, f, and g using a version of the CaltecH Inverse ModEling and Retrieval Algorithms (CHIMERA) atmospheric modeling code. We use particle size, aerosol production rates, and aerosol composition inputs from recent laboratory experiments relevant for the TRAPPIST-1 system to constrain cloud and haze behavior and their effects on transmission spectra. We explore these cloud and haze cases for a variety of theoretical atmospheric compositions including hydrogen-, nitrogen-, and carbon dioxide-dominated atmospheres. Then, we demonstrate the feasibility of physically-motivated, laboratory-supported clouds and hazes to obscure spectral features at wavelengths and resolutions relevant to instruments on the Hubble Space Telescope and the upcoming James Webb Space Telescope. Lastly, with laboratory based constraints of haze production rates for terrestrial exoplanets, we constrain possible bulk atmospheric compositions of the TRAPPIST-1 planets based on current observations. We show that continued collection of optical data, beyond the supported wavelength range of the James Webb Telescope, is necessary to explore the full effect of hazes for transmission spectra of exoplanetary atmospheres like the TRAPPIST-1 system.

Clinically relevant incidental cardiovascular findings in CT examinations

International Nuclear Information System (INIS)

Voigt, P.; Fahnert, J.; Kahn, T.; Surov, A.; Schramm, D.; Bach, A.G.

2017-01-01

Incidental cardiovascular findings are a frequent phenomenon in computed tomography (CT) examinations. As the result of a dedicated PubMed search this article gives a systemic overview of the current literature on the most important incidental cardiovascular findings, their prevalence and clinical relevance. The majority of incidental cardiovascular findings are of only low clinical relevance; however, highly relevant incidental findings, such as aortic aneurysms, thromboses and thromboembolic events can also occasionally be found, especially in oncology patients. The scans from every CT examination should also be investigated for incidental findings as they can be of decisive importance for the further clinical management of patients, depending on their clinical relevance. (orig.) [de

Modeling the modified drug release from curved shape drug delivery systems - Dome Matrix®.

Science.gov (United States)

Caccavo, D; Barba, A A; d'Amore, M; De Piano, R; Lamberti, G; Rossi, A; Colombo, P

2017-12-01

The controlled drug release from hydrogel-based drug delivery systems is a topic of large interest for research in pharmacology. The mathematical modeling of the behavior of these systems is a tool of emerging relevance, since the simulations can be of use in the design of novel systems, in particular for complex shaped tablets. In this work a model, previously developed, was applied to complex-shaped oral drug delivery systems based on hydrogels (Dome Matrix®). Furthermore, the model was successfully adopted in the description of drug release from partially accessible Dome Matrix® systems (systems with some surfaces coated). In these simulations, the erosion rate was used asa fitting parameter, and its dependence upon the surface area/volume ratio and upon the local fluid dynamics was discussed. The model parameters were determined by comparison with the drug release profile from a cylindrical tablet, then the model was successfully used for the prediction of the drug release from a Dome Matrix® system, for simple module configuration and for module assembled (void and piled) configurations. It was also demonstrated that, given the same initial S/V ratio, the drug release is independent upon the shape of the tablets but it is only influenced by the S/V evolution. The model reveals itself able to describe the observed phenomena, and thus it can be of use for the design of oral drug delivery systems, even if complex shaped. Copyright © 2017 Elsevier B.V. All rights reserved.

An investigation of factors affecting elementary school students' BMI values based on the system dynamics modeling.

Science.gov (United States)

Lan, Tian-Syung; Chen, Kai-Ling; Chen, Pin-Chang; Ku, Chao-Tai; Chiu, Pei-Hsuan; Wang, Meng-Hsiang

2014-01-01

This study used system dynamics method to investigate the factors affecting elementary school students' BMI values. The construction of the dynamic model is divided into the qualitative causal loop and the quantitative system dynamics modeling. According to the system dynamics modeling, this study consisted of research on the four dimensions: student's personal life style, diet-relevant parenting behaviors, advocacy and implementation of school nutrition education, and students' peer interaction. The results of this study showed that students with more adequate health concepts usually have better eating behaviors and consequently have less chance of becoming obese. In addition, this study also verified that educational attainment and socioeconomic status of parents have a positive correlation with students' amounts of physical activity, and nutrition education has a prominent influence on changing students' high-calorie diets.

Utility of Social Modeling for Proliferation Assessment - Enhancing a Facility-Level Model for Proliferation Resistance Assessment of a Nuclear Enegry System

Energy Technology Data Exchange (ETDEWEB)

Coles, Garill A.; Brothers, Alan J.; Gastelum, Zoe N.; Olson, Jarrod; Thompson, Sandra E.

2009-10-26

The Utility of Social Modeling for Proliferation Assessment project (PL09-UtilSocial) investigates the use of social and cultural information to improve nuclear proliferation assessments, including nonproliferation assessments, Proliferation Resistance (PR) assessments, safeguards assessments, and other related studies. These assessments often use and create technical information about a host State and its posture towards proliferation, the vulnerability of a nuclear energy system (NES) to an undesired event, and the effectiveness of safeguards. This objective of this project is to find and integrate social and technical information by explicitly considering the role of cultural, social, and behavioral factors relevant to proliferation; and to describe and demonstrate if and how social science modeling has utility in proliferation assessment. This report describes a modeling approach and how it might be used to support a location-specific assessment of the PR assessment of a particular NES. The report demonstrates the use of social modeling to enhance an existing assessment process that relies on primarily technical factors. This effort builds on a literature review and preliminary assessment performed as the first stage of the project and compiled in PNNL-18438. [ T his report describes an effort to answer questions about whether it is possible to incorporate social modeling into a PR assessment in such a way that we can determine the effects of social factors on a primarily technical assessment. This report provides: 1. background information about relevant social factors literature; 2. background information about a particular PR assessment approach relevant to this particular demonstration; 3. a discussion of social modeling undertaken to find and characterize social factors that are relevant to the PR assessment of a nuclear facility in a specific location; 4. description of an enhancement concept that integrates social factors into an existing, technically

Relevant pH and lipase for in vitro models of gastric digestion.

Science.gov (United States)

Sams, Laura; Paume, Julie; Giallo, Jacqueline; Carrière, Frédéric

2016-01-01

The development of in vitro digestion models relies on the availability of in vivo data such as digestive enzyme levels and pH values recorded in the course of meal digestion. The variations of these parameters along the GI tract are important for designing dynamic digestion models but also static models for which the choice of representative conditions of the gastric and intestinal conditions is critical. Simulating gastric digestion with a static model and a single set of parameters is particularly challenging because the variations in pH and enzyme concentration occurring in the stomach are much broader than those occurring in the small intestine. A review of the literature on this topic reveals that most models of gastric digestion use very low pH values that are not representative of the fed conditions. This is illustrated here by showing the variations in gastric pH as a function of meal gastric emptying instead of time. This representation highlights those pH values that are the most relevant for testing meal digestion in the stomach. Gastric lipolysis is still largely ignored or is performed with microbial lipases. In vivo data on gastric lipase and lipolysis have however been collected in humans and dogs during test meals. The biochemical characterization of gastric lipase has shown that this enzyme is rather unique among lipases: (i) stability and activity in the pH range 2 to 7 with an optimum at pH 4-5.4; (ii) high tensioactivity that allows resistance to bile salts and penetration into phospholipid layers covering TAG droplets; (iii) sn-3 stereospecificity for TAG hydrolysis; and (iv) resistance to pepsin. Most of these properties have been known for more than two decades and should provide a rational basis for the replacement of gastric lipase by other lipases when gastric lipase is not available.

submitter Thermal, Hydraulic, and Electromagnetic Modeling of Superconducting Magnet Systems

CERN Document Server

Bottura, L

2016-01-01

Modeling techniques and tailored computational tools are becoming increasingly relevant to the design and analysis of large-scale superconducting magnet systems. Efficient and reliable tools are useful to provide an optimal forecast of the envelope of operating conditions and margins, which are difficult to test even when a prototype is available. This knowledge can be used to considerably reduce the design margins of the system, and thus the overall cost, or increase reliability during operation. An integrated analysis of a superconducting magnet system is, however, a complex matter, governed by very diverse physics. This paper reviews the wide spectrum of phenomena and provides an estimate of the time scales of thermal, hydraulic, and electromagnetic mechanisms affecting the performance of superconducting magnet systems. The analysis is useful to provide guidelines on how to divide the complex problem into building blocks that can be integrated in a design and analysis framework for a consistent multiphysic...

Affective picture processing and motivational relevance: arousal and valence effects on ERPs in an oddball task.

Science.gov (United States)

Briggs, Kate E; Martin, Frances H

2009-06-01

There are two dominant theories of affective picture processing; one that attention is more deeply engaged by motivationally relevant stimuli (i.e., stimuli that activate both the appetitive and aversive systems), and two that attention is more deeply engaged by aversive stimuli described as the negativity bias. In order to identify the theory that can best account for affective picture processing, event-related potentials (ERPs) were recorded from 34 participants during a modified oddball paradigm in which levels of stimulus valence, arousal, and motivational relevance were systematically varied. Results were partially consistent with motivated attention models of emotional perception, as P3b amplitude was enhanced in response to highly arousing and motivationally relevant sexual and unpleasant stimuli compared to respective low arousing and less motivationally relevant stimuli. However P3b amplitudes were significantly larger in response to the highly arousing sexual stimuli compared to all other affective stimuli, which is not consistent with either dominant theory. The current study therefore highlights the need for a revised model of affective picture processing and provides a platform for further research investigating the independent effects of sexual arousal on cognitive processing.

RSMASS system model development

International Nuclear Information System (INIS)

Marshall, A.C.; Gallup, D.R.

1998-01-01

RSMASS system mass models have been used for more than a decade to make rapid estimates of space reactor power system masses. This paper reviews the evolution of the RSMASS models and summarizes present capabilities. RSMASS has evolved from a simple model used to make rough estimates of space reactor and shield masses to a versatile space reactor power system model. RSMASS uses unique reactor and shield models that permit rapid mass optimization calculations for a variety of space reactor power and propulsion systems. The RSMASS-D upgrade of the original model includes algorithms for the balance of the power system, a number of reactor and shield modeling improvements, and an automatic mass optimization scheme. The RSMASS-D suite of codes cover a very broad range of reactor and power conversion system options as well as propulsion and bimodal reactor systems. Reactor choices include in-core and ex-core thermionic reactors, liquid metal cooled reactors, particle bed reactors, and prismatic configuration reactors. Power conversion options include thermoelectric, thermionic, Stirling, Brayton, and Rankine approaches. Program output includes all major component masses and dimensions, efficiencies, and a description of the design parameters for a mass optimized system. In the past, RSMASS has been used as an aid to identify and select promising concepts for space power applications. The RSMASS modeling approach has been demonstrated to be a valuable tool for guiding optimization of the power system design; consequently, the model is useful during system design and development as well as during the selection process. An improved in-core thermionic reactor system model RSMASS-T is now under development. The current development of the RSMASS-T code represents the next evolutionary stage of the RSMASS models. RSMASS-T includes many modeling improvements and is planned to be more user-friendly. RSMASS-T will be released as a fully documented, certified code at the end of

Value-Relevance of Biological Assets under IFRS

OpenAIRE

Rute Gonçalves; Patrícia Lopes

2015-01-01

Using 389 firm-year observations of listed firms worldwide in 27 countries that adopted International Financial Reporting Standards (IFRS) until 2010, for the period 2011-2013, the purpose of this paper is to examine the value-relevance of fair value accounting of biological assets. In order to operationalize it as the book value’s ability to explain market equity value, this study adjusts the Ohlson model. The results support that recognized biological assets are value-relevant. After includ...

A Novel Relevance Feedback Approach Based on Similarity Measure Modification in an X-Ray Image Retrieval System Based on Fuzzy Representation Using Fuzzy Attributed Relational Graph

Directory of Open Access Journals (Sweden)

Hossien Pourghassem

2011-04-01

Full Text Available Relevance feedback approaches is used to improve the performance of content-based image retrieval systems. In this paper, a novel relevance feedback approach based on similarity measure modification in an X-ray image retrieval system based on fuzzy representation using fuzzy attributed relational graph (FARG is presented. In this approach, optimum weight of each feature in feature vector is calculated using similarity rate between query image and relevant and irrelevant images in user feedback. The calculated weight is used to tune fuzzy graph matching algorithm as a modifier parameter in similarity measure. The standard deviation of the retrieved image features is applied to calculate the optimum weight. The proposed image retrieval system uses a FARG for representation of images, a fuzzy matching graph algorithm as similarity measure and a semantic classifier based on merging scheme for determination of the search space in image database. To evaluate relevance feedback approach in the proposed system, a standard X-ray image database consisting of 10000 images in 57 classes is used. The improvement of the evaluation parameters shows proficiency and efficiency of the proposed system.

Extracting the relevant delays in time series modelling

DEFF Research Database (Denmark)

Goutte, Cyril

1997-01-01

selection, and more precisely stepwise forward selection. The method is compared to other forward selection schemes, as well as to a nonparametric tests aimed at estimating the embedding dimension of time series. The final application extends these results to the efficient estimation of FIR filters on some......In this contribution, we suggest a convenient way to use generalisation error to extract the relevant delays from a time-varying process, i.e. the delays that lead to the best prediction performance. We design a generalisation-based algorithm that takes its inspiration from traditional variable...

Revolutionary land use change in the 21st century: Is (rangeland) science relevant?

Science.gov (United States)

Herrick, J.E.; Brown, J.R.; Bestelmeyer, B.T.; Andrews, S.S.; Baldi, G.; Davies, J.; Duniway, M.; Havstad, K.M.; Karl, J.W.; Karlen, D.L.; Peters, Debra P.C.; Quinton, J.N.; Riginos, C.; Shaver, P.L.; Steinaker, D.; Twomlow, S.

2012-01-01

Rapidly increasing demand for food, fiber, and fuel together with new technologies and the mobility of global capital are driving revolutionary changes in land use throughout the world. Efforts to increase land productivity include conversion of millions of hectares of rangelands to crop production, including many marginal lands with low resistance and resilience to degradation. Sustaining the productivity of these lands requires careful land use planning and innovative management systems. Historically, this responsibility has been left to agronomists and others with expertise in crop production. In this article, we argue that the revolutionary land use changes necessary to support national and global food security potentially make rangeland science more relevant now than ever. Maintaining and increasing relevance will require a revolutionary change in range science from a discipline that focuses on a particular land use or land cover to one that addresses the challenge of managing all lands that, at one time, were considered to be marginal for crop production. We propose four strategies to increase the relevance of rangeland science to global land management: 1) expand our awareness and understanding of local to global economic, social, and technological trends in order to anticipate and identify drivers and patterns of conversion; 2) emphasize empirical studies and modeling that anticipate the biophysical (ecosystem services) and societal consequences of large-scale changes in land cover and use; 3) significantly increase communication and collaboration with the disciplines and sectors of society currently responsible for managing the new land uses; and 4) develop and adopt a dynamic and flexible resilience-based land classification system and data-supported conceptual models (e.g., state-and-transition models) that represent all lands, regardless of use and the consequences of land conversion to various uses instead of changes in state or condition that are

CASCADE: An Agent Based Framework For Modeling The Dynamics Of Smart Electricity Systems

OpenAIRE

Rylatt, R. M.; Gammon, Rupert; Boait, Peter John; Varga, L.; Allen, P.; Savill, M.; Snape, J. Richard; Lemon, Mark; Ardestani, B. M.; Pakka, V. H.; Fletcher, G.; Smith, S.; Fan, D.; Strathern, M.

2013-01-01

Collaborative project with Cranfield University The Complex Adaptive Systems, Cognitive Agents and Distributed Energy (CASCADE) project is developing a framework based on Agent Based Modelling (ABM). The CASCADE Framework can be used both to gain policy and industry relevant insights into the smart grid concept itself and as a platform to design and test distributed ICT solutions for smart grid based business entities. ABM is used to capture the behaviors of diff erent socia...

A PSO Driven Intelligent Model Updating and Parameter Identification Scheme for Cable-Damper System

Directory of Open Access Journals (Sweden)

Danhui Dan

2015-01-01

Full Text Available The precise measurement of the cable force is very important for monitoring and evaluating the operation status of cable structures such as cable-stayed bridges. The cable system should be installed with lateral dampers to reduce the vibration, which affects the precise measurement of the cable force and other cable parameters. This paper suggests a cable model updating calculation scheme driven by the particle swarm optimization (PSO algorithm. By establishing a finite element model considering the static geometric nonlinearity and stress-stiffening effect firstly, an automatically finite element method model updating powered by PSO algorithm is proposed, with the aims to identify the cable force and relevant parameters of cable-damper system precisely. Both numerical case studies and full-scale cable tests indicated that, after two rounds of updating process, the algorithm can accurately identify the cable force, moment of inertia, and damping coefficient of the cable-damper system.

THE RELEVANT TEMPORAL MARKET DEFINITION IN ANTITRUST ANALYSIS

Directory of Open Access Journals (Sweden)

Anzhelika Gerasymenko

2018-01-01

Full Text Available The purpose of the paper is to compare various theoretical approaches to the relevant temporal market definition, collecting the arguments for their implementation under the different kinds of antitrust cases. It is vital for the markets with peak demand (transport, electricity, markets of intergenerational products or discreet supply (agriculture. Methodology. The survey is based on the theoretical and graphical modelling of product space perception by consumers. It investigates changes of the latter under different marketing strategies of a seller. Statistical methods are used to analyse trends of demand and prices for iPhones’ changes, as well as dynamics of electricity consumption. Results. The paper reveals two facing approaches to the definition of relevant temporal market: 1 the discrete one that provides a short-run analysis of products’ substitutability and combines only those time periods that are characterized by a stable balance of demand and supply, as well as stable market equilibrium; 2 the coherent one that provides a long-run analysis of cyclical variation of the market. This cycling is based on the awareness of consumers and producers of intertemporal substitutability of products. The authors use the model of intertemporal competition to explain principles of these approaches and apply it to the iPhone market analysis. They conclude that the coherent approach must be applied to the temporal market definition for the products with elastic demand. Inelastic demand brings the necessity to apply the discrete approach to the temporal market definition. These conclusions cannot be applied to regulated markets. The system of government regulation is the main determinant of the temporal boundaries of such markets. Practical implications. The results of this research can be used by competition agencies in antitrust cases to define the relevant temporal market, where the violations of antitrust legislation can occur. The correct

Online drug databases: a new method to assess and compare inclusion of clinically relevant information.

Science.gov (United States)

Silva, Cristina; Fresco, Paula; Monteiro, Joaquim; Rama, Ana Cristina Ribeiro

2013-08-01

Evidence-Based Practice requires health care decisions to be based on the best available evidence. The model "Information Mastery" proposes that clinicians should use sources of information that have previously evaluated relevance and validity, provided at the point of care. Drug databases (DB) allow easy and fast access to information and have the benefit of more frequent content updates. Relevant information, in the context of drug therapy, is that which supports safe and effective use of medicines. Accordingly, the European Guideline on the Summary of Product Characteristics (EG-SmPC) was used as a standard to evaluate the inclusion of relevant information contents in DB. To develop and test a method to evaluate relevancy of DB contents, by assessing the inclusion of information items deemed relevant for effective and safe drug use. Hierarchical organisation and selection of the principles defined in the EGSmPC; definition of criteria to assess inclusion of selected information items; creation of a categorisation and quantification system that allows score calculation; calculation of relative differences (RD) of scores for comparison with an "ideal" database, defined as the one that achieves the best quantification possible for each of the information items; pilot test on a sample of 9 drug databases, using 10 drugs frequently associated in literature with morbidity-mortality and also being widely consumed in Portugal. Main outcome measure Calculate individual and global scores for clinically relevant information items of drug monographs in databases, using the categorisation and quantification system created. A--Method development: selection of sections, subsections, relevant information items and corresponding requisites; system to categorise and quantify their inclusion; score and RD calculation procedure. B--Pilot test: calculated scores for the 9 databases; globally, all databases evaluated significantly differed from the "ideal" database; some DB performed

Costs Systems: Relevance, Feasibility And Usefulness According To Public Officials In The State Of Paraná (Brazil

Directory of Open Access Journals (Sweden)

Luciane Maria Gonçalves Franco

2013-06-01

Full Text Available The aim in this study is to get to know the level of understanding and adoption of cost systems in cities in the State of Paraná. A descriptive study with a qualitative approach was undertaken. Data were collected through the application of a questionnaire in 67 cities in the State of Paraná. Descriptive analysis was used and Spearman’s correlation coefficient was applied to achieve the research objective. Among the study results, the following stand out: the incipient nature of knowledge about the relevance, feasibility and usefulness of a cost system; resulting from public officials’ limited knowledge, mainly about topics related to the budgetary and financial feasibility of adopting cost systems; an environment for the cost system, implemented costs systems and operating systems; although the answers obtained to proposals about cost information and control were significantly coherent.

Development of an ex vivo retention model simulating bioadhesion in the oral cavity using human saliva and physiologically relevant irrigation media

DEFF Research Database (Denmark)

Madsen, Katrine D.; Sander, Camilla; Baldursdottir, Stefania

2013-01-01

In recent years, there has been a particular interest in bioadhesive formulations for oromucosal drug delivery as this may promote prolonged local therapy and enhanced systemic effect. Saliva plays a vital role in oromucosal drug absorption by dissolving the drug and presenting it to the mucosal...... in the oral cavity. Thus we aimed at developing an advanced ex vivo buccal retention model, with focus on choosing a physiologically relevant irrigation media closely resembling human saliva. Spray dried chitosan microparticles containing metformin hydrochloride as an example of a small hydrophilic drug, were...... employed as bioadhesive formulations. Chewing-stimulated human whole saliva was collected and characterized for use in retention studies in comparison with four artificial irrigation media; phosphate buffer, Saliva Orthana(®), porcine gastric mucin base media (PGM3), and xanthan gum based media (XG2...

Atmospheric emissions modeling of energetic biomass alternatives using system dynamics approach

International Nuclear Information System (INIS)

Szarka, N.; University of Concepcion; Kakucs, O.; Wolfbauer, J.; Bezama, A.

2008-01-01

To simulate the quantitative effects of regional biomass alternatives for energetic purpose (BfE) on air pollutant emissions, a system dynamics model was developed and applied for the EuRegion Austrian-Hungarian cross-border area. The dynamic simulation program Vensim R was used to build an overall regional model with economic, social and environmental sectors. Within this model, the here-introduced regional air pollution sub-model (RegAir) includes the important human-made emissions of 10 pollutants resulting from all relevant source sectors within the region investigated. Emissions from activities related to biomass production, transport, conversion and final energy consumption were built in detail. After building and calibrating the RegAir model, seven quantitative test scenarios were defined and implemented into the world. Through the scenarios simulation, effects on air emissions were followed and compared over time. The results of these simulations show a significant reduction of CO 2 emission, especially in cases where fossil fuel displacement in heating devices is achieved on the largest scale. On the contrary, traditional air pollutants increase by most BfE options. The results of the RegAir model simulations of BfE alternatives over two decades provide useful quantifications of various air emissions and identify the less pollutant BfE alternatives in the dynamic context of the relevant air pollution sources of the region. After minor structural modification and appropriate calibration, RegAir can be applied to other regions as well. However, it is stated that, to finally decide on the overall most-appropriate options at a regional level, other environmental as well as economic and social effects must be taken into consideration, being the latter the goal of the mentioned overall regional model which serves as a model frame to the RegAir tool. (author)

The Earth System Model

Science.gov (United States)

Schoeberl, Mark; Rood, Richard B.; Hildebrand, Peter; Raymond, Carol

2003-01-01

The Earth System Model is the natural evolution of current climate models and will be the ultimate embodiment of our geophysical understanding of the planet. These models are constructed from components - atmosphere, ocean, ice, land, chemistry, solid earth, etc. models and merged together through a coupling program which is responsible for the exchange of data from the components. Climate models and future earth system models will have standardized modules, and these standards are now being developed by the ESMF project funded by NASA. The Earth System Model will have a variety of uses beyond climate prediction. The model can be used to build climate data records making it the core of an assimilation system, and it can be used in OSSE experiments to evaluate. The computing and storage requirements for the ESM appear to be daunting. However, the Japanese ES theoretical computing capability is already within 20% of the minimum requirements needed for some 2010 climate model applications. Thus it seems very possible that a focused effort to build an Earth System Model will achieve succcss.

Relevance of quantum mechanics on some aspects of ion channel function

OpenAIRE

Roy, Sisir; Llinás, Rodolfo

2009-01-01

Mathematical modeling of ionic diffusion along K ion channels indicates that such diffusion is oscillatory, at the weak non-Markovian limit. This finding leads us to derive a Schrödinger–Langevin equation for this kind of system within the framework of stochastic quantization. The Planck’s constant is shown to be relevant to the Lagrangian action at the level of a single ion channel. This sheds new light on the issue of applicability of quantum formalism to ion channel dynamics and to the phy...

Anatomical masking of pressure footprints based on the Oxford Foot Model: validation and clinical relevance.

Science.gov (United States)

Giacomozzi, Claudia; Stebbins, Julie A

2017-03-01

Plantar pressure analysis is widely used in the assessment of foot function. In order to assess regional loading, a mask is applied to the footprint to sub-divide it into regions of interest (ROIs). The most common masking method is based on geometric features of the footprint (GM). Footprint masking based on anatomical landmarks of the foot has been implemented more recently, and involves the integration of a 3D motion capture system, plantar pressure measurement device, and a multi-segment foot model. However, thorough validation of anatomical masking (AM) using pathological footprints has not yet been presented. In the present study, an AM method based on the Oxford Foot Model (OFM) was compared to an equivalent GM. Pressure footprints from 20 young healthy subjects (HG) and 20 patients with clubfoot (CF) were anatomically divided into 5 ROIs using a subset of the OFM markers. The same foot regions were also identified by using a standard GM method. Comparisons of intra-subject coefficient of variation (CV) showed that the OFM-based AM was at least as reliable as the GM for all investigated pressure parameters in all foot regions. Clinical relevance of AM was investigated by comparing footprints from HG and CF groups. Contact time, maximum force, force-time integral and contact area proved to be sensitive parameters that were able to distinguish HG and CF groups, using both AM and GM methods However, the AM method revealed statistically significant differences between groups in 75% of measured variables, compared to 62% using a standard GM method, indicating that the AM method is more sensitive for revealing differences between groups. Copyright © 2017 Elsevier B.V. All rights reserved.

A meta-analysis of the abscopal effect in preclinical models: Is the biologically effective dose a relevant physical trigger?

Directory of Open Access Journals (Sweden)

Raffaella Marconi

Full Text Available Preclinical in vivo studies using small animals are considered crucial in translational cancer research and clinical implementation of novel treatments. This is of paramount relevance in radiobiology, especially for any technological developments permitted to deliver high doses in single or oligo-fractionated regimens, such as stereotactic ablative radiotherapy (SABR. In this context, clinical success in cancer treatment needs to be guaranteed, sparing normal tissue and preventing the potential spread of disease or local recurrence. In this work we introduce a new dose-response relationship based on relevant publications concerning preclinical models with regard to delivered dose, fractionation schedule and occurrence of biological effects on non-irradiated tissue, abscopal effects.We reviewed relevant publications on murine models and the abscopal effect in radiation cancer research following PRISMA methodology. In particular, through a log-likelihood method, we evaluated whether the occurrence of abscopal effects may be related to the biologically effective dose (BED. To this aim, studies accomplished with different tumor histotypes were considered in our analysis including breast, colon, lung, fibrosarcoma, pancreas, melanoma and head and neck cancer. For all the tumors, the α / β ratio was assumed to be 10 Gy, as generally adopted for neoplastic cells.Our results support the hypothesis that the occurrence rate of abscopal effects in preclinical models increases with BED. In particular, the probability of revealing abscopal effects is 50% when a BED of 60 Gy is generated.Our study provides evidence that SABR treatments associated with high BEDs could be considered an effective strategy in triggering the abscopal effect, thus shedding light on the promising outcomes revealed in clinical practice.

COTHERM: Geophysical Modeling of High Enthalpy Geothermal Systems

Science.gov (United States)

Grab, Melchior; Maurer, Hansruedi; Greenhalgh, Stewart

2014-05-01

three components: (1) A literature study to find relevant, existing theoretical models, (2) laboratory determinations to confirm their validity for Icelandic rocks of interest and (3) a field campaign to obtain in-situ, shallow rock properties from seismic and resistivity tomography surveys over a fossilized and exhumed geothermal system. Theoretical models describing physical behavior for rocks with strong inhomogeneities, complex pore structure and complicated fluid-rock interaction mechanisms are often poorly constrained and require the knowledge about a wide range of parameters that are difficult to quantify. Therefore we calibrate the theoretical models by laboratory measurements on samples of rocks, forming magmatic geothermal reservoirs. Since the samples used in the laboratory are limited in size, and laboratory equipment operates at much higher frequency than the instruments used in the field, the results need to be up-scaled from the laboratory scale to field scale. This is not a simple process and entails many uncertainties.

Order-disorder transitions in time-discrete mean field systems with memory: a novel approach via nonlinear autoregressive models

International Nuclear Information System (INIS)

Frank, T D; Mongkolsakulvong, S

2015-01-01

In a previous study strongly nonlinear autoregressive (SNAR) models have been introduced as a generalization of the widely-used time-discrete autoregressive models that are known to apply both to Markov and non-Markovian systems. In contrast to conventional autoregressive models, SNAR models depend on process mean values. So far, only linear dependences have been studied. We consider the case in which process mean values can have a nonlinear impact on the processes under consideration. It is shown that such models describe Markov and non-Markovian many-body systems with mean field forces that exhibit a nonlinear impact on single subsystems. We exemplify that such nonlinear dependences can describe order-disorder phase transitions of time-discrete Markovian and non-Markovian many-body systems. The relevant order parameter equations are derived and issues of stability and stationarity are studied. (paper)

On agent cooperation : the relevance of cognitive plausibility for multiagent simulation models of organizations

NARCIS (Netherlands)

van den Broek, J.

2001-01-01

Human organizations and computational multiagent systems both are social systems because they are both made up of a large number of interacting parts. Since human organizations are arrangements of distributed real intelligence, any DAI model is in some sense a model of an organization. This

On agent cooperation : The relevance of cognitive plausibility for multiagent simulation models of organizations

NARCIS (Netherlands)

Broek, J. van den

2001-01-01

Human organizations and computational multiagent systems both are social systems because they are both made up of a large number of interacting parts. Since human organizations are arrangements of distributed real intelligence, any DAI model is in some sense a model of an organization. This

An Investigation of Factors Affecting Elementary School Students’ BMI Values Based on the System Dynamics Modeling

Directory of Open Access Journals (Sweden)

Tian-Syung Lan

2014-01-01

Full Text Available This study used system dynamics method to investigate the factors affecting elementary school students’ BMI values. The construction of the dynamic model is divided into the qualitative causal loop and the quantitative system dynamics modeling. According to the system dynamics modeling, this study consisted of research on the four dimensions: student’s personal life style, diet-relevant parenting behaviors, advocacy and implementation of school nutrition education, and students’ peer interaction. The results of this study showed that students with more adequate health concepts usually have better eating behaviors and consequently have less chance of becoming obese. In addition, this study also verified that educational attainment and socioeconomic status of parents have a positive correlation with students’ amounts of physical activity, and nutrition education has a prominent influence on changing students’ high-calorie diets.

A new course and textbook on Physical Models of Living Systems, for science and engineering undergraduates

Science.gov (United States)

Nelson, Philip

2015-03-01

I'll describe an intermediate-level course on ``Physical Models of Living Systems.'' The only prerequisite is first-year university physics and calculus. The course is a response to rapidly growing interest among undergraduates in a broad range of science and engineering majors. Students acquire several research skills that are often not addressed in traditional courses: Basic modeling skills Probabilistic modeling skills Data analysis methods Computer programming using a general-purpose platform like MATLAB or Python Dynamical systems, particularly feedback control. These basic skills, which are relevant to nearly any field of science or engineering, are presented in the context of case studies from living systems, including: Virus dynamics Bacterial genetics and evolution of drug resistance Statistical inference Superresolution microscopy Synthetic biology Naturally evolved cellular circuits. Work supported by NSF Grants EF-0928048 and DMR-0832802.

Translating hydrologically-relevant variables from the ice sheet model SICOPOLIS to the Greenland Analog Project hydrologic modeling domain

Science.gov (United States)

Vallot, Dorothée; Applegate, Patrick; Pettersson, Rickard

2013-04-01

Projecting future climate and ice sheet development requires sophisticated models and extensive field observations. Given the present state of our knowledge, it is very difficult to say what will happen with certainty. Despite the ongoing increase in atmospheric greenhouse gas concentrations, the possibility that a new ice sheet might form over Scandinavia in the far distant future cannot be excluded. The growth of a new Scandinavian Ice Sheet would have important consequences for buried nuclear waste repositories. The Greenland Analogue Project, initiated by the Swedish Nuclear Fuel and Waste Management Company (SKB), is working to assess the effects of a possible future ice sheet on groundwater flow by studying a constrained domain in Western Greenland by field measurements (including deep bedrock drilling in front of the ice sheet) combined with numerical modeling. To address the needs of the GAP project, we interpolated results from an ensemble of ice sheet model runs to the smaller and more finely resolved modeling domain used in the GAP project's hydrologic modeling. Three runs have been chosen with three fairly different positive degree-day factors among those that reproduced the modern ice margin at the borehole position. The interpolated results describe changes in hydrologically-relevant variables over two time periods, 115 ka to 80 ka, and 20 ka to 1 ka. In the first of these time periods, the ice margin advances over the model domain; in the second time period, the ice margin retreats over the model domain. The spatially-and temporally dependent variables that we treated include the ice thickness, basal melting rate, surface mass balance, basal temperature, basal thermal regime (frozen or thawed), surface temperature, and basal water pressure. The melt flux is also calculated.

Inferring relevance in a changing world

Directory of Open Access Journals (Sweden)

Robert C Wilson

2012-01-01

Full Text Available Reinforcement learning models of human and animal learning usually concentrate on how we learn the relationship between different stimuli or actions and rewards. However, in real world situations stimuli are ill-defined. On the one hand, our immediate environment is extremely multi-dimensional. On the other hand, in every decision-making scenario only a few aspects of the environment are relevant for obtaining reward, while most are irrelevant. Thus a key question is how do we learn these relevant dimensions, that is, how do we learn what to learn about? We investigated this process of representation learning experimentally, using a task in which one stimulus dimension was relevant for determining reward at each point in time. As in real life situations, in our task the relevant dimension can change without warning, adding ever-present uncertainty engendered by a constantly changing environment. We show that human performance on this task is better described by a suboptimal strategy based on selective attention and serial hypothesis testing rather than a normative strategy based on probabilistic inference. From this, we conjecture that the problem of inferring relevance in general scenarios is too computationally demanding for the brain to solve optimally. As a result the brain utilizes approximations, employing these even in simplified scenarios in which optimal representation learning is tractable, such as the one in our experiment.

Sustainable transportation according to certification systems: A viability analysis based on neighborhood size and context relevance

Energy Technology Data Exchange (ETDEWEB)

Gouda, Amr Ah., E-mail: amr.gouda@eng.asu.edu.eg [Center for Technology and Society, Technische Universität Berlin, Hardenbergstr, 16-18, Berlin 10623 (Germany); Architecture Department, Faculty of Engineering, Ain Shams University, 1 Sarayat St., Abassia, Cairo (Egypt); Masoumi, Houshmand E. [Center for Technology and Society, Technische Universität Berlin, Hardenbergstr, 16-18, Berlin 10623 (Germany)

2017-03-15

Urban sustainability certification (USC) systems comprehensively assess and benchmark the sustainability of neighborhoods, communities, etc. However, it is important to understand what USCs mean by neighborhoods and communities in terms of definition and their certified developments' size. This study focuses on sustainable transportation and its measures in USCs in order to discern: how relevant are these measures to the varied local conditions, especially in developing countries? And whether they can generate palpable benefits vis-à-vis the certified developments' site areas. Taking descriptive analysis methods, this study focuses on four prominent USCs, namely, LEED for Neighborhood Development, BREEAM Communities, CASBEE for Urban Development, and The Pearl Community Rating System. The four USCs prescribed multiple measures for sustainable transportation, particularly in favor of active transportation and public transportation. However, the relatively small size of their citified developments and the varying transportation conditions among different contexts attenuate the viability and relevance of the advocated measures for both modes. In order to yield more benefits, USCs should underscore the integrative nature of neighborhoods and communities, and transportation within their prescribed criteria and measures. Moreover, sustainable transportation as a theme should be tailored to the local conditions rather than being adopted or adapted from global USCs. - Highlights: • Transportation measures in four prominent certification systems were investigated. • Most certified neighborhoods, communities and developments have small site areas. • Certifications are insensitive to realities of transport in developing countries. • Benefits from advocating active transport only within certified areas are minimal. • Certifications devalue the integrative nature of neighborhoods and transportation.

Sustainable transportation according to certification systems: A viability analysis based on neighborhood size and context relevance

International Nuclear Information System (INIS)

Gouda, Amr Ah.; Masoumi, Houshmand E.

2017-01-01

Urban sustainability certification (USC) systems comprehensively assess and benchmark the sustainability of neighborhoods, communities, etc. However, it is important to understand what USCs mean by neighborhoods and communities in terms of definition and their certified developments' size. This study focuses on sustainable transportation and its measures in USCs in order to discern: how relevant are these measures to the varied local conditions, especially in developing countries? And whether they can generate palpable benefits vis-à-vis the certified developments' site areas. Taking descriptive analysis methods, this study focuses on four prominent USCs, namely, LEED for Neighborhood Development, BREEAM Communities, CASBEE for Urban Development, and The Pearl Community Rating System. The four USCs prescribed multiple measures for sustainable transportation, particularly in favor of active transportation and public transportation. However, the relatively small size of their citified developments and the varying transportation conditions among different contexts attenuate the viability and relevance of the advocated measures for both modes. In order to yield more benefits, USCs should underscore the integrative nature of neighborhoods and communities, and transportation within their prescribed criteria and measures. Moreover, sustainable transportation as a theme should be tailored to the local conditions rather than being adopted or adapted from global USCs. - Highlights: • Transportation measures in four prominent certification systems were investigated. • Most certified neighborhoods, communities and developments have small site areas. • Certifications are insensitive to realities of transport in developing countries. • Benefits from advocating active transport only within certified areas are minimal. • Certifications devalue the integrative nature of neighborhoods and transportation.

Models of human operators: Their need and usefulness for improvement of advanced control systems and control rooms

International Nuclear Information System (INIS)

Knee, H.E.; Schryver, J.C.

1991-01-01

Models of human behavior and cognition (HB ampersand C) are necessary for understanding the total response of complex systems. Many such model have come available over the past thirty years for various applications. Many potential model users remain skeptical about their practically, acceptability, and usefulness. Such hesitancy stems in part from disbelief in the ability to model complex cognitive processes, and a belief that relevant human behavior can be adequately accounted for through the use of common-sense heuristics. This paper will highlight several models of HB ampersand C and identify existing and potential applications in attempt to dispel such notions. 26 refs

Neural network modelling and dynamical system theory: are they relevant to study the governing dynamics of association football players?

Science.gov (United States)

Dutt-Mazumder, Aviroop; Button, Chris; Robins, Anthony; Bartlett, Roger

2011-12-01

Recent studies have explored the organization of player movements in team sports using a range of statistical tools. However, the factors that best explain the performance of association football teams remain elusive. Arguably, this is due to the high-dimensional behavioural outputs that illustrate the complex, evolving configurations typical of team games. According to dynamical system analysts, movement patterns in team sports exhibit nonlinear self-organizing features. Nonlinear processing tools (i.e. Artificial Neural Networks; ANNs) are becoming increasingly popular to investigate the coordination of participants in sports competitions. ANNs are well suited to describing high-dimensional data sets with nonlinear attributes, however, limited information concerning the processes required to apply ANNs exists. This review investigates the relative value of various ANN learning approaches used in sports performance analysis of team sports focusing on potential applications for association football. Sixty-two research sources were summarized and reviewed from electronic literature search engines such as SPORTDiscus, Google Scholar, IEEE Xplore, Scirus, ScienceDirect and Elsevier. Typical ANN learning algorithms can be adapted to perform pattern recognition and pattern classification. Particularly, dimensionality reduction by a Kohonen feature map (KFM) can compress chaotic high-dimensional datasets into low-dimensional relevant information. Such information would be useful for developing effective training drills that should enhance self-organizing coordination among players. We conclude that ANN-based qualitative analysis is a promising approach to understand the dynamical attributes of association football players.

A cost optimization model for 100% renewable residential energy supply systems

DEFF Research Database (Denmark)

Milan, Christian; Bojesen, Carsten; Nielsen, Mads Pagh

2012-01-01

The concept of net zero energy buildings (Net ZEB) has received increased attention throughout the last years. A well adapted and optimized design of the energy supply system is crucial for the performance of these buildings. To achieve this, a holistic approach is needed which accounts for the i......The concept of net zero energy buildings (Net ZEB) has received increased attention throughout the last years. A well adapted and optimized design of the energy supply system is crucial for the performance of these buildings. To achieve this, a holistic approach is needed which accounts......'s involving on-site production of heat and electricity in combination with electricity exchanged with the public grid. The model is based on linear programming and determines the optimal capacities for each relevant supply technology in terms of the overall system costs. It has been successfully applied...

Performance evaluation of functioning of natural-industrial system of mining-processing complex with help of analytical and mathematical models

Science.gov (United States)

Bosikov, I. I.; Klyuev, R. V.; Revazov, V. Ch; Pilieva, D. E.

2018-03-01

The article describes research and analysis of hazardous processes occurring in the natural-industrial system and effectiveness assessment of its functioning using mathematical models. Studies of the functioning regularities of the natural and industrial system are becoming increasingly relevant in connection with the formulation of the task of modernizing production and the economy of Russia as a whole. In connection with a significant amount of poorly structured data, it is complicated by regulations for the effective functioning of production processes, social and natural complexes, under which a sustainable development of the natural-industrial system of the mining and processing complex would be ensured. Therefore, the scientific and applied problems, the solution of which allows one to formalize the hidden structural functioning patterns of the natural-industrial system and to make managerial decisions of organizational and technological nature to improve the efficiency of the system, are very relevant.

Dynamic model of frequency control in Danish power system with large scale integration of wind power

DEFF Research Database (Denmark)

Basit, Abdul; Hansen, Anca Daniela; Sørensen, Poul Ejnar

2013-01-01

This work evaluates the impact of large scale integration of wind power in future power systems when 50% of load demand can be met from wind power. The focus is on active power balance control, where the main source of power imbalance is an inaccurate wind speed forecast. In this study, a Danish...... power system model with large scale of wind power is developed and a case study for an inaccurate wind power forecast is investigated. The goal of this work is to develop an adequate power system model that depicts relevant dynamic features of the power plants and compensates for load generation...... imbalances, caused by inaccurate wind speed forecast, by an appropriate control of the active power production from power plants....

Human performance modeling for system of systems analytics.

Energy Technology Data Exchange (ETDEWEB)

Dixon, Kevin R.; Lawton, Craig R.; Basilico, Justin Derrick; Longsine, Dennis E. (INTERA, Inc., Austin, TX); Forsythe, James Chris; Gauthier, John Henry; Le, Hai D.

2008-10-01

A Laboratory-Directed Research and Development project was initiated in 2005 to investigate Human Performance Modeling in a System of Systems analytic environment. SAND2006-6569 and SAND2006-7911 document interim results from this effort; this report documents the final results. The problem is difficult because of the number of humans involved in a System of Systems environment and the generally poorly defined nature of the tasks that each human must perform. A two-pronged strategy was followed: one prong was to develop human models using a probability-based method similar to that first developed for relatively well-understood probability based performance modeling; another prong was to investigate more state-of-art human cognition models. The probability-based modeling resulted in a comprehensive addition of human-modeling capability to the existing SoSAT computer program. The cognitive modeling resulted in an increased understanding of what is necessary to incorporate cognition-based models to a System of Systems analytic environment.

Radiation transformation studies: are they relevant to radiation protection problems?

International Nuclear Information System (INIS)

Seymour, C.B.; Mothersill, C.

1988-01-01

Because of the difficulties of studying radio-carcinogenesis in humans, several in vitro systems are utilised. These cell transformation systems are reviewed, with particular emphasis on their relevance to human radiological protection problems. Most available systems use rodent fibroblasts. These are discussed in detail. Attention is drawn to certain artefacts which can cause problems with interpretation of such data. The relevance of these systems is questionable because of species differences, particularly concerning life span and because most human tumours are derived from epithelial cells. New epithelial culture systems and three-dimensional tissue culture methods becoming available are discussed in the light of their potential for addressing radiation protection problems. (author)

Heuristics for Relevancy Ranking of Earth Dataset Search Results

Science.gov (United States)

Lynnes, Christopher; Quinn, Patrick; Norton, James

2016-01-01

As the Variety of Earth science datasets increases, science researchers find it more challenging to discover and select the datasets that best fit their needs. The most common way of search providers to address this problem is to rank the datasets returned for a query by their likely relevance to the user. Large web page search engines typically use text matching supplemented with reverse link counts, semantic annotations and user intent modeling. However, this produces uneven results when applied to dataset metadata records simply externalized as a web page. Fortunately, data and search provides have decades of experience in serving data user communities, allowing them to form heuristics that leverage the structure in the metadata together with knowledge about the user community. Some of these heuristics include specific ways of matching the user input to the essential measurements in the dataset and determining overlaps of time range and spatial areas. Heuristics based on the novelty of the datasets can prioritize later, better versions of data over similar predecessors. And knowledge of how different user types and communities use data can be brought to bear in cases where characteristics of the user (discipline, expertise) or their intent (applications, research) can be divined. The Earth Observing System Data and Information System has begun implementing some of these heuristics in the relevancy algorithm of its Common Metadata Repository search engine.

Towards a systemic functional model for comparing forms of discourse in academic writing Towards a systemic functional model for comparing forms of discourse in academic writing

Directory of Open Access Journals (Sweden)

Meriel Bloor

2008-04-01

Full Text Available This article reports on research into the variation of texts across disciplines and considers the implications of this work for the teaching of writing. The research was motivated by the need to improve students’ academic writing skills in English and the limitations of some current pedagogic advice. The analysis compares Methods sections of research articles across four disciplines, including applied and hard sciences, on a cline, or gradient, termed slow to fast. The analysis considers the characteristics the texts share, but more importantly identifies the variation between sets of linguistic features. Working within a systemic functional framework, the texts are analysed for length, sentence length, lexical density, readability, grammatical metaphor, Thematic choice, as well as various rhetorical functions. Contextually relevant reasons for the differences are considered and the implications of the findings are related to models of text and discourse. Recommendations are made for developing domain models that relate clusters of features to positions on a cline. This article reports on research into the variation of texts across disciplines and considers the implications of this work for the teaching of writing. The research was motivated by the need to improve students’ academic writing skills in English and the limitations of some current pedagogic advice. The analysis compares Methods sections of research articles across four disciplines, including applied and hard sciences, on a cline, or gradient, termed slow to fast. The analysis considers the characteristics the texts share, but more importantly identifies the variation between sets of linguistic features. Working within a systemic functional framework, the texts are analysed for length, sentence length, lexical density, readability, grammatical metaphor, Thematic choice, as well as various rhetorical functions. Contextually relevant reasons for the differences are considered

Six-Dimensional Modeling of Coherent Bunch Instabilities and Related Feedback Systems using Power-Series Maps for the Lattice

Energy Technology Data Exchange (ETDEWEB)

Briggs, D.

2003-07-07

The authors have developed 6-dimensional phase-space code that tracks macroparticles for the study of coherent bunch instabilities and related feedback systems. The model is based on power-series maps to represent the lattice, and allows for straightforward inclusion of effects such as amplitude dependent tune shift, chromaticity, synchrotron oscillations, and synchrotron radiation. It simulates long range wake fields such as resistive-wall effects as well as the higher order modes in cavities. The model has served to study the dynamics relevant to the transverse feedback system currently being commissioned for the Advanced Light Source (ALS). Current work integrates earlier versions into a modular system that includes models for transverse and longitudinal feedback systems. It is designed to provide a modular approach to the dynamics and diagnostics, allowing a user to modify the model of a storage ring at run-time without recompilation.

A Technology Acceptance Model for Inter-Organisational Electronic Medical Records Systems

Directory of Open Access Journals (Sweden)

Jocelyn Handy

2001-11-01

Full Text Available This article reports the findings of the first stage of an ongoing, longitudinal study into the implementation of an interorganisational electronic medical records (EMR system. The study adapted and expanded Davis' (1993 technology acceptance model (TAM to investigate the attitudes of primary care practitioners towards a proposed system for maternity patients. All doctors and midwives holding maternity care contracts with a large urban hospital in New Zealand were sent a questionnaire soliciting their views on a planned EMR system linking the hospital and the primary care sectors. The results showed that whilst Davis' two key factors of perceived ease of use and perceived usefulness were important to medical professionals, another key factor, perceived system acceptability, which concerns control and management of information is vitally important to the acceptance of the system. The study also showed that the two groups of professionals had differing requirements due to different levels of experience and practice computerisation. Finally, the research highlights a number of wider organisational issues particularly relevant to the use of inter organisational systems in general and healthcare systems in particular.

Analysing stratified medicine business models and value systems: innovation-regulation interactions.

Science.gov (United States)

Mittra, James; Tait, Joyce

2012-09-15

Stratified medicine offers both opportunities and challenges to the conventional business models that drive pharmaceutical R&D. Given the increasingly unsustainable blockbuster model of drug development, due in part to maturing product pipelines, alongside increasing demands from regulators, healthcare providers and patients for higher standards of safety, efficacy and cost-effectiveness of new therapies, stratified medicine promises a range of benefits to pharmaceutical and diagnostic firms as well as healthcare providers and patients. However, the transition from 'blockbusters' to what might now be termed 'niche-busters' will require the adoption of new, innovative business models, the identification of different and perhaps novel types of value along the R&D pathway, and a smarter approach to regulation to facilitate innovation in this area. In this paper we apply the Innogen Centre's interdisciplinary ALSIS methodology, which we have developed for the analysis of life science innovation systems in contexts where the value creation process is lengthy, expensive and highly uncertain, to this emerging field of stratified medicine. In doing so, we consider the complex collaboration, timing, coordination and regulatory interactions that shape business models, value chains and value systems relevant to stratified medicine. More specifically, we explore in some depth two convergence models for co-development of a therapy and diagnostic before market authorisation, highlighting the regulatory requirements and policy initiatives within the broader value system environment that have a key role in determining the probable success and sustainability of these models. Copyright © 2012 Elsevier B.V. All rights reserved.

Selected Topics on Systems Modeling and Natural Language Processing: Editorial Introduction to the Issue 7 of CSIMQ

Directory of Open Access Journals (Sweden)

Witold Andrzejewski

2016-07-01

Full Text Available The seventh issue of Complex Systems Informatics and Modeling Quarterly presents five papers devoted to two distinct research topics: systems modeling and natural language processing (NLP. Both of these subjects are very important in computer science. Through modeling we can simplify the studied problem by concentrating on only one aspect at a time. Moreover, a properly constructed model allows the modeler to work on higher levels of abstraction and not having to concentrate on details. Since the size and complexity of information systems grows rapidly, creating good models of such systems is crucial. The analysis of natural language is slowly becoming a widely used tool in commerce and day to day life. Opinion mining allows recommender systems to provide accurate recommendations based on user-generated reviews. Speech recognition and NLP are the basis for such widely used personal assistants as Apple’s Siri, Microsoft’s Cortana, and Google Now. While a lot of work has already been done on natural language processing, the research usually concerns widely used languages, such as English. Consequently, natural language processing in languages other than English is very relevant subject and is addressed in this issue.

A General Model for Performance Evaluation in DS-CDMA Systems with Variable Spreading Factors

Science.gov (United States)

Chiaraluce, Franco; Gambi, Ennio; Righi, Giorgia

This paper extends previous analytical approaches for the study of CDMA systems to the relevant case of multipath environments where users can operate at different bit rates. This scenario is of interest for the Wideband CDMA strategy employed in UMTS, and the model permits the performance comparison of classic and more innovative spreading signals. The method is based on the characteristic function approach, that allows to model accurately the various kinds of interferences. Some numerical examples are given with reference to the ITU-R M. 1225 Recommendations, but the analysis could be extended to different channel descriptions.

Relevance Theory as model for analysing visual and multimodal communication

NARCIS (Netherlands)

Forceville, C.; Machin, D.

2014-01-01

Elaborating on my earlier work (Forceville 1996: chapter 5, 2005, 2009; see also Yus 2008), I will here sketch how discussions of visual and multimodal discourse can be embedded in a more general theory of communication and cognition: Sperber and Wilson’s Relevance Theory/RT (Sperber and Wilson

Optimization of large-scale heterogeneous system-of-systems models.

Energy Technology Data Exchange (ETDEWEB)

Parekh, Ojas; Watson, Jean-Paul; Phillips, Cynthia Ann; Siirola, John; Swiler, Laura Painton; Hough, Patricia Diane (Sandia National Laboratories, Livermore, CA); Lee, Herbert K. H. (University of California, Santa Cruz, Santa Cruz, CA); Hart, William Eugene; Gray, Genetha Anne (Sandia National Laboratories, Livermore, CA); Woodruff, David L. (University of California, Davis, Davis, CA)

2012-01-01

Decision makers increasingly rely on large-scale computational models to simulate and analyze complex man-made systems. For example, computational models of national infrastructures are being used to inform government policy, assess economic and national security risks, evaluate infrastructure interdependencies, and plan for the growth and evolution of infrastructure capabilities. A major challenge for decision makers is the analysis of national-scale models that are composed of interacting systems: effective integration of system models is difficult, there are many parameters to analyze in these systems, and fundamental modeling uncertainties complicate analysis. This project is developing optimization methods to effectively represent and analyze large-scale heterogeneous system of systems (HSoS) models, which have emerged as a promising approach for describing such complex man-made systems. These optimization methods enable decision makers to predict future system behavior, manage system risk, assess tradeoffs between system criteria, and identify critical modeling uncertainties.

PTEN phosphatase-independent maintenance of glandular morphology in a predictive colorectal cancer model system.

Science.gov (United States)

Jagan, Ishaan C; Deevi, Ravi K; Fatehullah, Aliya; Topley, Rebecca; Eves, Joshua; Stevenson, Michael; Loughrey, Maurice; Arthur, Kenneth; Campbell, Frederick Charles

2013-11-01

Organotypic models may provide mechanistic insight into colorectal cancer (CRC) morphology. Three-dimensional (3D) colorectal gland formation is regulated by phosphatase and tensin homologue deleted on chromosome 10 (PTEN) coupling of cell division cycle 42 (cdc42) to atypical protein kinase C (aPKC). This study investigated PTEN phosphatase-dependent and phosphatase-independent morphogenic functions in 3D models and assessed translational relevance in human studies. Isogenic PTEN-expressing or PTEN-deficient 3D colorectal cultures were used. In translational studies, apical aPKC activity readout was assessed against apical membrane (AM) orientation and gland morphology in 3D models and human CRC. We found that catalytically active or inactive PTEN constructs containing an intact C2 domain enhanced cdc42 activity, whereas mutants of the C2 domain calcium binding region 3 membrane-binding loop (M-CBR3) were ineffective. The isolated PTEN C2 domain (C2) accumulated in membrane fractions, but C2 M-CBR3 remained in cytosol. Transfection of C2 but not C2 M-CBR3 rescued defective AM orientation and 3D morphogenesis of PTEN-deficient Caco-2 cultures. The signal intensity of apical phospho-aPKC correlated with that of Na(+)/H(+) exchanger regulatory factor-1 (NHERF-1) in the 3D model. Apical NHERF-1 intensity thus provided readout of apical aPKC activity and associated with glandular morphology in the model system and human colon. Low apical NHERF-1 intensity in CRC associated with disruption of glandular architecture, high cancer grade, and metastatic dissemination. We conclude that the membrane-binding function of the catalytically inert PTEN C2 domain influences cdc42/aPKC-dependent AM dynamics and gland formation in a highly relevant 3D CRC morphogenesis model system.

PTEN Phosphatase-Independent Maintenance of Glandular Morphology in a Predictive Colorectal Cancer Model System

Directory of Open Access Journals (Sweden)

Ishaan C. Jagan

2013-11-01

Full Text Available Organotypic models may provide mechanistic insight into colorectal cancer (CRC morphology. Three-dimensional (3D colorectal gland formation is regulated by phosphatase and tensin homologue deleted on chromosome 10 (PTEN coupling of cell division cycle 42 (cdc42 to atypical protein kinase C (aPKC. This study investigated PTEN phosphatase-dependent and phosphatase-independent morphogenic functions in 3D models and assessed translational relevance in human studies. Isogenic PTEN-expressing or PTEN-deficient 3D colorectal cultures were used. In translational studies, apical aPKC activity readout was assessed against apical membrane (AM orientation and gland morphology in 3D models and human CRC. We found that catalytically active or inactive PTEN constructs containing an intact C2 domain enhanced cdc42 activity, whereas mutants of the C2 domain calcium binding region 3 membrane-binding loop (M-CBR3 were ineffective. The isolated PTEN C2 domain (C2 accumulated in membrane fractions, but C2 M-CBR3 remained in cytosol. Transfection of C2 but not C2 M-CBR3 rescued defective AM orientation and 3D morphogenesis of PTEN-deficient Caco-2 cultures. The signal intensity of apical phospho-aPKC correlated with that of Na+/H+ exchanger regulatory factor-1 (NHERF-1 in the 3D model. Apical NHERF-1 intensity thus provided readout of apical aPKC activity and associated with glandular morphology in the model system and human colon. Low apical NHERF-1 intensity in CRC associated with disruption of glandular architecture, high cancer grade, and metastatic dissemination. We conclude that the membrane-binding function of the catalytically inert PTEN C2 domain influences cdc42/aPKC-dependent AM dynamics and gland formation in a highly relevant 3D CRC morphogenesis model system.

Gene Expression Analysis to Assess the Relevance of Rodent Models to Human Lung Injury.

Science.gov (United States)

Sweeney, Timothy E; Lofgren, Shane; Khatri, Purvesh; Rogers, Angela J

2017-08-01

The relevance of animal models to human diseases is an area of intense scientific debate. The degree to which mouse models of lung injury recapitulate human lung injury has never been assessed. Integrating data from both human and animal expression studies allows for increased statistical power and identification of conserved differential gene expression across organisms and conditions. We sought comprehensive integration of gene expression data in experimental acute lung injury (ALI) in rodents compared with humans. We performed two separate gene expression multicohort analyses to determine differential gene expression in experimental animal and human lung injury. We used correlational and pathway analyses combined with external in vitro gene expression data to identify both potential drivers of underlying inflammation and therapeutic drug candidates. We identified 21 animal lung tissue datasets and three human lung injury bronchoalveolar lavage datasets. We show that the metasignatures of animal and human experimental ALI are significantly correlated despite these widely varying experimental conditions. The gene expression changes among mice and rats across diverse injury models (ozone, ventilator-induced lung injury, LPS) are significantly correlated with human models of lung injury (Pearson r = 0.33-0.45, P human lung injury. Predicted therapeutic targets, peptide ligand signatures, and pathway analyses are also all highly overlapping. Gene expression changes are similar in animal and human experimental ALI, and provide several physiologic and therapeutic insights to the disease.

Selected System Models

Science.gov (United States)

Schmidt-Eisenlohr, F.; Puñal, O.; Klagges, K.; Kirsche, M.

Apart from the general issue of modeling the channel, the PHY and the MAC of wireless networks, there are specific modeling assumptions that are considered for different systems. In this chapter we consider three specific wireless standards and highlight modeling options for them. These are IEEE 802.11 (as example for wireless local area networks), IEEE 802.16 (as example for wireless metropolitan networks) and IEEE 802.15 (as example for body area networks). Each section on these three systems discusses also at the end a set of model implementations that are available today.

6,7-dimethoxy-coumarin as a probe of hydration dynamics in biologically relevant systems

Science.gov (United States)

Ghose, Avisek; Amaro, Mariana; Kovaricek, Petr; Hof, Martin; Sykora, Jan

2018-04-01

Coumarin derivatives are well known fluorescence reporters for investigating biological systems due to their strong micro-environment sensitivity. Despite having wide range of environment sensitive fluorescence probes, the potential of 6,7-dimethoxy-coumarin has not been studied extensively so far. With a perspective of its use in protein studies, namely using the unnatural amino acid technology or as a substrate for hydrolase enzymes, we study acetyloxymethyl-6,7-dimethoxycoumarin (Ac-DMC). We investigate the photophysics and hydration dynamics of this dye in aerosol-OT (AOT) reverse micelles at various water contents using the time dependent fluorescence shift (TDFS) method. The TDFS response in AOT reverse micelles from water/surfactant ratio of 0 to 20 confirms its sensitivity towards the hydration and mobility of its microenvironment. Moreover, we show that the fluorophore can be efficiently quenched by halide ions. Hence, we conclude that the 6,7-dimethoxy-methylcoumarin fluorophore is useful for studying hydration parameters in biologically relevant systems.

Assessing Hospital Physicians' Acceptance of Clinical Information Systems: A Review of the Relevant Literature

Directory of Open Access Journals (Sweden)

Bram Pynoo

2013-06-01

Full Text Available In view of the tremendous potential benefits of clinical information systems (CIS for the quality of patient care; it is hard to understand why not every CIS is embraced by its targeted users, the physicians. The aim of this study is to propose a framework for assessing hospital physicians' CIS-acceptance that can serve as a guidance for future research into this area. Hereto, a review of the relevant literature was performed in the ISI Web-of-Science database. Eleven studies were withheld from an initial dataset of 797 articles. Results show that just as in business settings, there are four core groups of variables that influence physicians' acceptance of a CIS: its usefulness and ease of use, social norms, and factors in the working environment that facilitate use of the CIS (such as providing computers/workstations, compatibility between the new and existing system.... We also identified some additional variables as predictors of CIS-acceptance.

Modelling the adoption of automatic milking systems in Noord-Holland

Directory of Open Access Journals (Sweden)

Matteo Floridi

2013-05-01

Full Text Available Innovation and new technology adoption represent two central elements for the business and industry development process in agriculture. One of the most relevant innovations in dairy farms is the robotisation of the milking process through the adoption of Automatic Milking Systems (AMS. The purpose of this paper is to assess the impact of selected Common Agricultural Policy measures on the adoption of AMS in dairy farms. The model developed is a dynamic farm-household model that is able to simulate the adoption of AMS taking into account the allocation of productive factors between on-farm and off-farm activities. The model simulates the decision to replace a traditional milking system with AMS using a Real Options approach that allows farmers to choose the optimal timing of investments. Results show that the adoption of AMS, and the timing of such a decision, is strongly affected by policy uncertainty and market conditions. The effect of this uncertainty is to postpone the decision to adopt the new technology until farmers have gathered enough information to reduce the negative effects of the technological lock-in. AMS adoption results in an increase in farm size and herd size due to the reduction in the labour required for milking operations.

Predicting the resilience and recovery of aquatic systems: a framework for model evolution within environmental observatories

Science.gov (United States)

Hipsey, Matthew R.; Hamilton, David P.; Hanson, Paul C.; Carey, Cayelan C.; Coletti, Janaine Z; Read, Jordan S.; Ibelings, Bas W; Valensini, Fiona J; Brookes, Justin D

2015-01-01

Maintaining the health of aquatic systems is an essential component of sustainable catchmentmanagement, however, degradation of water quality and aquatic habitat continues to challenge scientistsand policy-makers. To support management and restoration efforts aquatic system models are requiredthat are able to capture the often complex trajectories that these systems display in response to multiplestressors. This paper explores the abilities and limitations of current model approaches in meeting this chal-lenge, and outlines a strategy based on integration of flexible model libraries and data from observationnetworks, within a learning framework, as a means to improve the accuracy and scope of model predictions.The framework is comprised of a data assimilation component that utilizes diverse data streams from sensornetworks, and a second component whereby model structural evolution can occur once the model isassessed against theoretically relevant metrics of system function. Given the scale and transdisciplinarynature of the prediction challenge, network science initiatives are identified as a means to develop and inte-grate diverse model libraries and workflows, and to obtain consensus on diagnostic approaches to modelassessment that can guide model adaptation. We outline how such a framework can help us explore thetheory of how aquatic systems respond to change by bridging bottom-up and top-down lines of enquiry,and, in doing so, also advance the role of prediction in aquatic ecosystem management.

Nonlinear Dynamic Modeling of a Supersonic Commercial Transport Turbo-Machinery Propulsion System for Aero-Propulso-Servo-Elasticity Research

Science.gov (United States)

Connolly, Joe; Carlson, Jan-Renee; Kopasakis, George; Woolwine, Kyle

2015-01-01

This paper covers the development of an integrated nonlinear dynamic model for a variable cycle turbofan engine, supersonic inlet, and convergent-divergent nozzle that can be integrated with an aeroelastic vehicle model to create an overall Aero-Propulso-Servo-Elastic (APSE) modeling tool. The primary focus of this study is to provide a means to capture relevant thrust dynamics of a full supersonic propulsion system by using relatively simple quasi-one dimensional computational fluid dynamics (CFD) methods that will allow for accurate control algorithm development and capture the key aspects of the thrust to feed into an APSE model. Previously, propulsion system component models have been developed and are used for this study of the fully integrated propulsion system. An overview of the methodology is presented for the modeling of each propulsion component, with a focus on its associated coupling for the overall model. To conduct APSE studies the described dynamic propulsion system model is integrated into a high fidelity CFD model of the full vehicle capable of conducting aero-elastic studies. Dynamic thrust analysis for the quasi-one dimensional dynamic propulsion system model is presented along with an initial three dimensional flow field model of the engine integrated into a supersonic commercial transport.

Predicting Formation Damage in Aquifer Thermal Energy Storage Systems Utilizing a Coupled Hydraulic-Thermal-Chemical Reservoir Model

Science.gov (United States)

Müller, Daniel; Regenspurg, Simona; Milsch, Harald; Blöcher, Guido; Kranz, Stefan; Saadat, Ali

2014-05-01

In aquifer thermal energy storage (ATES) systems, large amounts of energy can be stored by injecting hot water into deep or intermediate aquifers. In a seasonal production-injection cycle, water is circulated through a system comprising the porous aquifer, a production well, a heat exchanger and an injection well. This process involves large temperature and pressure differences, which shift chemical equilibria and introduce or amplify mechanical processes. Rock-fluid interaction such as dissolution and precipitation or migration and deposition of fine particles will affect the hydraulic properties of the porous medium and may lead to irreversible formation damage. In consequence, these processes determine the long-term performance of the ATES system and need to be predicted to ensure the reliability of the system. However, high temperature and pressure gradients and dynamic feedback cycles pose challenges on predicting the influence of the relevant processes. Within this study, a reservoir model comprising a coupled hydraulic-thermal-chemical simulation was developed based on an ATES demonstration project located in the city of Berlin, Germany. The structural model was created with Petrel, based on data available from seismic cross-sections and wellbores. The reservoir simulation was realized by combining the capabilities of multiple simulation tools. For the reactive transport model, COMSOL Multiphysics (hydraulic-thermal) and PHREEQC (chemical) were combined using the novel interface COMSOL_PHREEQC, developed by Wissmeier & Barry (2011). It provides a MATLAB-based coupling interface between both programs. Compared to using COMSOL's built-in reactive transport simulator, PHREEQC additionally calculates adsorption and reaction kinetics and allows the selection of different activity coefficient models in the database. The presented simulation tool will be able to predict the most important aspects of hydraulic, thermal and chemical transport processes relevant to

Rapid Discrimination Among Putative Mechanistic Models of Biochemical Systems.

Science.gov (United States)

Lomnitz, Jason G; Savageau, Michael A

2016-08-31

An overarching goal in molecular biology is to gain an understanding of the mechanistic basis underlying biochemical systems. Success is critical if we are to predict effectively the outcome of drug treatments and the development of abnormal phenotypes. However, data from most experimental studies is typically noisy and sparse. This allows multiple potential mechanisms to account for experimental observations, and often devising experiments to test each is not feasible. Here, we introduce a novel strategy that discriminates among putative models based on their repertoire of qualitatively distinct phenotypes, without relying on knowledge of specific values for rate constants and binding constants. As an illustration, we apply this strategy to two synthetic gene circuits exhibiting anomalous behaviors. Our results show that the conventional models, based on their well-characterized components, cannot account for the experimental observations. We examine a total of 40 alternative hypotheses and show that only 5 have the potential to reproduce the experimental data, and one can do so with biologically relevant parameter values.

Effects of clinically relevant MPL mutations in the transmembrane domain revealed at the atomic level through computational modeling.

Science.gov (United States)

Lee, Tai-Sung; Kantarjian, Hagop; Ma, Wanlong; Yeh, Chen-Hsiung; Giles, Francis; Albitar, Maher

2011-01-01

Mutations in the thrombopoietin receptor (MPL) may activate relevant pathways and lead to chronic myeloproliferative neoplasms (MPNs). The mechanisms of MPL activation remain elusive because of a lack of experimental structures. Modern computational biology techniques were utilized to explore the mechanisms of MPL protein activation due to various mutations. Transmembrane (TM) domain predictions, homology modeling, ab initio protein structure prediction, and molecular dynamics (MD) simulations were used to build structural dynamic models of wild-type and four clinically observed mutants of MPL. The simulation results suggest that S505 and W515 are important in keeping the TM domain in its correct position within the membrane. Mutations at either of these two positions cause movement of the TM domain, altering the conformation of the nearby intracellular domain in unexpected ways, and may cause the unwanted constitutive activation of MPL's kinase partner, JAK2. Our findings represent the first full-scale molecular dynamics simulations of the wild-type and clinically observed mutants of the MPL protein, a critical element of the MPL-JAK2-STAT signaling pathway. In contrast to usual explanations for the activation mechanism that are based on the relative translational movement between rigid domains of MPL, our results suggest that mutations within the TM region could result in conformational changes including tilt and rotation (azimuthal) angles along the membrane axis. Such changes may significantly alter the conformation of the adjacent and intrinsically flexible intracellular domain. Hence, caution should be exercised when interpreting experimental evidence based on rigid models of cytokine receptors or similar systems.

Data-assisted reduced-order modeling of extreme events in complex dynamical systems.

Science.gov (United States)

Wan, Zhong Yi; Vlachas, Pantelis; Koumoutsakos, Petros; Sapsis, Themistoklis

2018-01-01

The prediction of extreme events, from avalanches and droughts to tsunamis and epidemics, depends on the formulation and analysis of relevant, complex dynamical systems. Such dynamical systems are characterized by high intrinsic dimensionality with extreme events having the form of rare transitions that are several standard deviations away from the mean. Such systems are not amenable to classical order-reduction methods through projection of the governing equations due to the large intrinsic dimensionality of the underlying attractor as well as the complexity of the transient events. Alternatively, data-driven techniques aim to quantify the dynamics of specific, critical modes by utilizing data-streams and by expanding the dimensionality of the reduced-order model using delayed coordinates. In turn, these methods have major limitations in regions of the phase space with sparse data, which is the case for extreme events. In this work, we develop a novel hybrid framework that complements an imperfect reduced order model, with data-streams that are integrated though a recurrent neural network (RNN) architecture. The reduced order model has the form of projected equations into a low-dimensional subspace that still contains important dynamical information about the system and it is expanded by a long short-term memory (LSTM) regularization. The LSTM-RNN is trained by analyzing the mismatch between the imperfect model and the data-streams, projected to the reduced-order space. The data-driven model assists the imperfect model in regions where data is available, while for locations where data is sparse the imperfect model still provides a baseline for the prediction of the system state. We assess the developed framework on two challenging prototype systems exhibiting extreme events. We show that the blended approach has improved performance compared with methods that use either data streams or the imperfect model alone. Notably the improvement is more significant in

Data-assisted reduced-order modeling of extreme events in complex dynamical systems.

Directory of Open Access Journals (Sweden)

Zhong Yi Wan

Full Text Available The prediction of extreme events, from avalanches and droughts to tsunamis and epidemics, depends on the formulation and analysis of relevant, complex dynamical systems. Such dynamical systems are characterized by high intrinsic dimensionality with extreme events having the form of rare transitions that are several standard deviations away from the mean. Such systems are not amenable to classical order-reduction methods through projection of the governing equations due to the large intrinsic dimensionality of the underlying attractor as well as the complexity of the transient events. Alternatively, data-driven techniques aim to quantify the dynamics of specific, critical modes by utilizing data-streams and by expanding the dimensionality of the reduced-order model using delayed coordinates. In turn, these methods have major limitations in regions of the phase space with sparse data, which is the case for extreme events. In this work, we develop a novel hybrid framework that complements an imperfect reduced order model, with data-streams that are integrated though a recurrent neural network (RNN architecture. The reduced order model has the form of projected equations into a low-dimensional subspace that still contains important dynamical information about the system and it is expanded by a long short-term memory (LSTM regularization. The LSTM-RNN is trained by analyzing the mismatch between the imperfect model and the data-streams, projected to the reduced-order space. The data-driven model assists the imperfect model in regions where data is available, while for locations where data is sparse the imperfect model still provides a baseline for the prediction of the system state. We assess the developed framework on two challenging prototype systems exhibiting extreme events. We show that the blended approach has improved performance compared with methods that use either data streams or the imperfect model alone. Notably the improvement is more

The Relevance Aura of Bibliographic Records.

Science.gov (United States)

Brooks, Terrence A.

1997-01-01

Analyzes relevance assessments of topical descriptors for bibliographic records for two dimensions: (1) a vertical conceptual hierarchy of broad to narrow descriptors, and (2) a horizontal linkage of related terms. The data were analyzed for a semantic distance and semantic direction effect as postulated by the Semantic Distance Model. (Author/LRW)

Regional and global modeling estimates of policy relevant background ozone over the United States

Science.gov (United States)

Emery, Christopher; Jung, Jaegun; Downey, Nicole; Johnson, Jeremiah; Jimenez, Michele; Yarwood, Greg; Morris, Ralph