WorldWideScience

Sample records for rapeseed brassica campestris

  1. Comparison of processing treatments on the composition and functional properties of rapeseed preparations (Brassica campestris L. var. toria).

    Science.gov (United States)

    Mahajan, A; Dua, S

    1994-01-01

    Rapeseed preparations viz. rapeseed meal, concentrates and isolates were prepared using different processing treatments involving organic solvents, acids, alkali, steaming and boiling. Their anti-nutritional constituents and functional properties were studied in comparison to undefatted meal. Percent decrease in phytic acid and phenolic content was maximum in seeds boiled for 30 min and isolates, respectively. Isolate II prepared by sodium hexa-metaphosphate had minimum glucosinolates, maximum content of total proteins and much improved nitrogen solubility, emulsifying and foaming properties. Water absorption and fat absorption capacities were enhanced by boiling seeds prior to grinding and ammonia-methanol extraction, respectively. Viscosity decreased in all the treatments as compared to control.

  2. Occurrence of Xanthomonas campestris pv. campestris (Pammel, 1895 Dowson 1939, on Brassicas in Montenegro

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    Dragana Radunović

    2012-01-01

    Full Text Available Brassicas form the most important group of vegetable crops in Montenegro. The cabbage(Brassica oleracea var. capitata is most commonly grown, although other brassicas,particularly kale, Brussels sprout, cauliflower and broccoli, have been increasingly producedsince recently. One of the specialties of vegetable production in Montenegro is growing ofcollard (Brassica oleracea var. acephala, which is the simplest variety of the Brassica oleraceaspecies and in the nearest relation with their wild ancestor – the sylvestris variety.Diseases are the main restrictive factors for successful production of these vegetables.Susceptibility of the cultivars and inadequate control often result in more or less damagedcrops in some plots.Causal agents of brassica diseases, especially bacterial, have not been investigated inMontenegro until 2009. Since the symptoms observed in 2009 were „V” shaped leaf edgenecrosis and black rot of vascular tissue, it was assumed that they were caused by plantpathogenic bacterium Xanthomonas campestris pv. campestris.Samples of the infected plants were collected from different localities in Montenegro.Isolation and identification of the bacterium were performed using laboratory methodsaccording to Schaad (1980, Lelliott and Stead (1987 and Arsenijević (1997. Examinationof chosen bacterial isolates was conducted using both, classical bacteriological methods(examination of their pathogenic, morphological, cultivation and biochemical and physiologicalcharacteristics, and ELISA test.The obtained results confirmed the presence of X.campestris pv. campestris (Pammel,1895 Dowson 1939, on cabbage, kale, broccoli and collard in Montenegro. This is the firstexperimental evidence that collard is the host of X. campestris pv. campestris in Montenegro.

  3. Inheritance of oilseed rape (Brassica napus) RAPD markers in a backcross progeny with Brassica campestris

    DEFF Research Database (Denmark)

    Mikkelsen, T.R.; Jensen, J.; Bagger Jørgensen, Rikke

    1996-01-01

    Different cultivars/transgenic lines of oilseed rape (Brassica napus) were crossed (as females) with different cultivars/populations of Brassica campestris. All cross combinations produced seed, with an average seed set per pollination of 9.8. Backcrossing of selected interspecific hybrids (as...... markers could be assigned to six linkage groups, most probably reflecting six B. napus C-chromosomes. The presence of backcross plants with recombinant genotypes suggests that complex genetic processes can take place during the interspecific hybridisation and backcrossing in these Brassica species....... The implications of our results for the possible choice nf integration sites of transgenes in oilseed rape are discussed....

  4. A proteomic analysis of seed development in Brassica campestri L.

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    Wenlan Li

    Full Text Available To gain insights into the protein dynamics during seed development, a proteomic study on the developing Brassica campestri L. seeds with embryos in different embryogenesis stages was carried out. The seed proteins at 10, 16, 20, 25 and 35 DAP (days after pollination, respectively, were separated using two-dimensional gel electrophoresis and identities of 209 spots with altered abundance were determined by matrix-assisted laser desorption ionization time-of-flight/time-of-flight mass spectrometry (MALDI-TOF/TOF MS. These proteins were classified into 16 groups according to their functions. The most abundant proteins were related to primary metabolism, indicating the heavy demand of materials for rapid embryo growth. Besides, the high amount of proteins involved in protein processing and destination indicated importance of protein renewal during seed development. The remaining were those participated in oxidation/detoxification, energy, defense, transcription, protein synthesis, transporter, cell structure, signal transduction, secondary metabolism, transposition, DNA repair, storage and so on. Protein abundance profiles of each functional class were generated and hierarchical cluster analysis established 8 groups of dynamic patterns. Our results revealed novel characters of protein dynamics in seed development in Brassica campestri L. and provided valuable information about the complex process of seed development in plants.

  5. Especificidade de hospedeiro nas interações Xanthomonas campestris pv. campestris - brássicas Host specificity in interaction Xanthomonas campestris pv. campestris - brassicas

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    Dulândula Silva Miguel-Wruck

    2010-06-01

    Full Text Available Face às escassas informações acerca da variabilidade patogênica de isolados brasileiros de Xanthomonas campestris pv. campestris, realizou-se um estudo para avaliar a especificidade patogênica de trinta e três isolados do patógeno, provenientes de várias regiões do Brasil e do exterior, a oito espécies de brássicas, através de inoculação por meio de injeção da suspensão bacteriana nas folhas. Desse total, 12 isolados foram obtidos de couve-comum (Brassica oleracea var. acephala, nove de repolho (B. oleracea var. capitata, cinco de couve-flor (B. oleracea var. botrytis, dois de canola (B. napus, um de brócolos (B. oleracea var. italica, um de couve-chinesa (B. chinensis, um de couve-rábano (B. oleracea var. gongylodes e dois de rabanete (Raphanus sativus. A avaliação da patogenicidade dos isolados da bactéria, frente aos hospedeiros em estudo, demonstrou que 14 deles não apresentaram especificidade, originando sintomas em todas as diferentes plantas inoculadas. Os 19 isolados restantes, entretanto, apresentaram relativo grau de especificidade, não causando doença em uma ou mais das plantas inoculadas.Considering the lack of information in literature about the pathogenic variability of Brazilian isolates of Xanthomonas campestris pv. campestris, a study was carried out to determine the pathogenic specificity of 33 isolates of this bacterium originated from several regions of Brazil and overseas to eight different Brassica species, through inoculation by means of injection of the bacterial suspension in leaves. From these isolates, 12 were obtained from collard greens (Brassica oleracea var. acephala, nine from cabbage (B. oleracea var. capitata, five from cauliflower (B. oleracea var. botrytis, two from canola (B. napus, one from broccoli (B. oleracea var. italica, one from Chinese cabbage (B. chinensis, one from kohlrabi (B. oleracea var. gongylodes and two from radish (Raphanus sativus. The pathogenicity of the bacterium

  6. Xerophilic mycopopulations isolated from rapeseeds (Brassica napus

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    Škrinjar Marija M.

    2013-01-01

    Full Text Available This paper presents the results of an investigation related to mycological populations of rapeseed samples produced in the Institute of Field and Vegetable Crops in Novi Sad (location: Rimski Šančevi, Novi Sad, with a special emphasis on the potentially toxigenic mycopopulations. Mycological investigations were performed on the samples that were treated with 4% solution of Na-hypochlorite, and on the ones that were not submitted to this treatment. Isolation and determination of total mould count was carried out using Dichloran Glycerol Agar (DG18. The identification of isolated moulds was done according to modern keys for fungal determination. From 20 untreated tested samples, 17 were contaminated with moulds (10.0 to 4.7x102 cfu/g. When the samples were treated with 4% solution of Na-hypochlorite, moulds were isolated only form 4 samples, and the total mould count ranged from 10.0 to 60.0 cfu/g. In the isolated mycopopulations, xerophilic moulds dominated, especially those from the genera Aspergillus, Eurotium and Penicillium. In the isolated mycopopulations, high degree of isolated species belonged to toxigenic species from the genera Alternaria, Aspergillus, Fusarium, Eurotium and Penicillium. [Projekat Ministarstva nauke Republike Srbije, br. III46009 i br.TR31025

  7. Characterizing Variation of Branch Angle and Genome-Wide Association Mapping in Rapeseed (Brassica napus L.)

    National Research Council Canada - National Science Library

    Liu, Jia; Wang, Wenxiang; Mei, Desheng; Wang, Hui; Fu, Li; Liu, Daoming; Li, Yunchang; Hu, Qiong

    2016-01-01

    .... In this study, a natural population of rapeseed was grown in three environments and evaluated for branch angle trait to characterize their phenotypic patterns and genotype with a 60K Brassica Infinium SNP array...

  8. Large scale purification of rapeseed proteins (Brassica napus L.).

    Science.gov (United States)

    Bérot, S; Compoint, J P; Larré, C; Malabat, C; Guéguen, J

    2005-04-15

    Rapeseed (Brassica napus L.) cruciferin (12S globulin), napin (2S albumin) and lipid transfer proteins (LTP) were purified at a multi-g scale. The procedure developed was simple, rather fast and resolutive; it permitted the recovery of these proteins with a good yield, such as 40% for cruciferin and 18% for napin. Nanofiltration eliminated the major phenolic compounds. The remaining protein fraction was fractionated by cation exchange chromatography (CEC) on a streamline SP-XL column in alkaline conditions. The unbound neutral cruciferin was polished by size exclusion chromatography. The alkaline napin isoforms and LTP, adsorbed on the beads, were eluted as a whole fraction and further separated by an other CEC step at acidic pH. Napins were polished by hydrophobic interaction chromatography (HIC). The fractions were characterized by reverse phase HPLC, electrophoresis, N-terminal sequencing and mass spectrometry. All the fractions contained less than 5% of impurities.

  9. Over-expression of miR158 causes pollen abortion in Brassica campestris ssp. chinensis.

    Science.gov (United States)

    Ma, Zhiming; Jiang, Jianxia; Hu, Ziwei; Lyu, Tianqi; Yang, Yang; Jiang, Jingjing; Cao, Jiashu

    2017-02-01

    We identified and cloned the two precursors of miR158 and its target gene in Brassica campestris ssp. chinensis, which both had high relative expression in the inflorescences. Further study revealed that over-expression of miR158 caused reduced pollen varbility, which was caused by the degradation of pollen contents from the binucleate microspore stage. These results first suggest the role of miR158 in pollen development of Brassica campestris ssp. chinensis. MicroRNAs (miRNAs) play crucial roles in many important growth and development processes both in plants and animals by regulating the expression of their target genes via mRNA cleavage or translational repression. In this study, miR158, a Brassicaceae specific miRNA, was functionally characterized with regard to its role in pollen development of non-heading Chinese cabbage (Brassica campestris ssp. chinensis). Two family members of miR158 in B. campestris, namely bra-miR158a1 and bra-miR158a2, and their target gene bra027656, which encodes a pentatricopeptide repeat (PPR) containing protein, were identified. Then, qRT-PCR analysis and GUS-reporter system revealed that both bra-miR158 and its target gene had relatively high expression levels in the inflorescences. Further study revealed that over-expression of miR158 caused reduced pollen varbility and pollen germination ratio, and the degradation of pollen contents from the binucleate microspore stage was also found in those deformed pollen grains, which led to pollen shrinking and collapse in later pollen development stage. These results first shed light on the importance of miR158 in pollen development of Brassica campestris ssp. chinensis.

  10. Production and cytogenetics of Brassica campestris-alboglabra chromosome addition lines

    DEFF Research Database (Denmark)

    Chen, B.Y.; Cheng, B.F.; Bagger Jørgensen, Rikke

    1997-01-01

    Four different Brassica campestris-alboglabra monosomic addition lines (AA + 1 chromosome from C, 2n = 21) were obtained after consecutive backcrosses between resynthesized B. napus (AACC, 2n = 38) and the parental B. campestris (AA, 2n = 20) accession. The alien chromosomes of B. alboglabra (CC, 2......n = 18) in the addition lines were distinguished by random amplified polymorphic DNA (RAPD) marker analysis and morphology of mitotic chromosomes. Four RAPD marker synteny groups were established, which represented the four different alien chromosomes of B. alboglabra in the four addition lines...

  11. 21 CFR 184.1555 - Rapeseed oil.

    Science.gov (United States)

    2010-04-01

    ... bleached rapeseed oil at 310-375 °F, using a catalyst such as nickel, until the iodine number is 4 or less... sodium hydroxide catalyst, to 330 °F under partial vacuum and steam sparging agitation. (2) The..., bleached, and deodorized edible oil obtained from certain varieties of Brassica Napus or B. Campestris of...

  12. Effect of environment on rapeseed (Brassica napus L. yield

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    Marjanović-Jeromela Ana

    2010-01-01

    Full Text Available Rapeseed seed is highly valuable raw material in oil and food industry. The main goals of rapeseed breeding are oil as the product with the highest commercial value, oil quality, and yield. Different winter and spring rapeseed cultivars and hybrids were tested at different locations in order to test their value. The environment had significant effect on seed yield. .

  13. Effect of microwave treatment on the efficacy of expeller pressing of Brassica napus rapeseed and Brassica juncea mustard seeds.

    Science.gov (United States)

    Niu, Yanxing; Rogiewicz, Anna; Wan, Chuyun; Guo, Mian; Huang, Fenghong; Slominski, Bogdan A

    2015-04-01

    A study was conducted to evaluate the effect of microwave heating on the efficacy of expeller pressing of rapeseed and mustard seed and the composition of expeller meals in two types of Brassica napus rapeseed (intermediate- and low-glucosinolate) and in Brassica juncea mustard (high-glucosinolate). Following microwave treatment, the microstructure of rapeseed using transmission electron microscopy showed a significant disappearance of oil bodies and myrosin cells. After 6 min of microwave heating (400 g, 800 W), the oil content of rapeseed expeller meal decreased from 44.9 to 13.5% for intermediate-glucosinolate B. napus rapeseed, from 42.6 to 11.3% for low-glucosinolate B. napus rapeseed, and from 44.4 to 14.1% for B. juncea mustard. The latter values were much lower than the oil contents of the corresponding expeller meals derived from the unheated seeds (i.e., 26.6, 22.6, and 29.8%, respectively). Neutral detergent fiber (NDF) contents showed no differences except for the expeller meal from the intermediate-glucosinolate B. napus rapeseed, which increased from 22.7 to 29.2% after 6 min of microwave heating. Microwave treatment for 4 and 5 min effectively inactivated myrosinase enzyme of intermediate-glucosinolate B. napus rapeseed and B. juncea mustard seed, respectively. In low-glucosinolate B. napus rapeseed the enzyme appeared to be more heat stable, with some activity being present after 6 min of microwave heating. Myrosinase enzyme inactivation had a profound effect on the glucosinolate content of expeller meals and prevented their hydrolysis to toxic breakdown products during the expelling process. It appeared evident from this study that microwave heating for 6 min was an effective method of producing expeller meal without toxic glucosinolate breakdown products while at the same time facilitating high yield of oil during the expelling process.

  14. Genome-Wide Association Study Provides Insight into the Genetic Control of Plant Height in Rapeseed (Brassica napus L.)

    OpenAIRE

    Chengming Sun; Benqi Wang; Lei Yan; Kaining Hu; Sheng Liu; Yongming Zhou; Chunyun Guan; Zhenqian Zhang; Jiana Li; Jiefu Zhang; Song Chen; Jing Wen; Chaozhi Ma; Jinxing Tu; Jinxiong Shen

    2016-01-01

    Plant height is a key morphological trait of rapeseed. In this study, we measured plant height of a rapeseed population across six environments. This population contains 476 inbred lines representing the major Chinese rapeseed genepool and 44 lines from other countries. The 60K Brassica Infinium® SNP array was utilized to genotype the association panel. A genome-wide association study (GWAS) was performed via three methods, including a robust, novel, nonparametric Anderson-Darling (A-D) test....

  15. Random amplified polymorphic DNA markers of the Brassica alboglabra chromosome of a B. campestris-alboglabra addition line

    DEFF Research Database (Denmark)

    Bagger Jørgensen, Rikke; Chen, B.Y.; Cheng, B.F.

    1996-01-01

    The alien C-genome chromosome in a Brassica campestris-alboglabra monosomic addition line was characterized by random amplified polymorphic DNA (RAPD) analysis. The alien chromosome carried three loci, E(c), W-c and Lap-1C, controlling synthesis of erucic acid, white flower colour and a fast...

  16. Tissue-specific distribution of secondary metabolites in rapeseed (Brassica napus L..

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    Jingjing Fang

    Full Text Available Four different parts, hypocotyl and radicle (HR, inner cotyledon (IC, outer cotyledon (OC, seed coat and endosperm (SE, were sampled from mature rapeseed (Brassica napus L. by laser microdissection. Subsequently, major secondary metabolites, glucosinolates and sinapine, as well as three minor ones, a cyclic spermidine conjugate and two flavonoids, representing different compound categories, were qualified and quantified in dissected samples by high-performance liquid chromatography with diode array detection and mass spectrometry. No qualitative and quantitative difference of glucosinolates and sinapine was detected in embryo tissues (HR, IC and OC. On the other hand, the three minor compounds were observed to be distributed unevenly in different rapeseed tissues. The hypothetic biological functions of the distribution patterns of different secondary metabolites in rapeseed are discussed.

  17. PECTATE LYASE-LIKE10 is associated with pollen wall development in Brassica campestris.

    Science.gov (United States)

    Jiang, Jingjing; Yao, Lina; Yu, Youjian; Lv, Meiling; Miao, Ying; Cao, Jiashu

    2014-11-01

    PECTATE LYASE-LIKE10 (PLL10) was previously identified as one of the differentially expressed genes both in microspores during the late pollen developmental stages and in pistils during the fertilization process in Chinese cabbage (Brassica campestris ssp. chinensis). Here, antisense-RNA was used to study the functions of BcPLL10 in Chinese cabbage. Abnormal pollen was identified in the transgenic lines (bcpll10-4, -5, and -6). In fertilization experiments, fewer seeds were harvested when the antisense-RNA lines were used as pollen donor. In vivo and in vitro pollen germination assays less germinated pollen tubes were observed in bcpll10 lines. Scanning electron microscopy observation verified that the tryphine materials were over accumulated around the pollen surface and sticked them together in bcpll10. Moreover, transmission electron microscopy observation revealed that the internal endintine was overdeveloped and predominantly occupied the intine, and disturbed the normal proportional distribution of the two layers in the non-germinal furrow region; and no obvious demarcation existed between them in the germinal furrow region in the bcpll10 pollen. Collectively, this study presented a novel PLL gene that played an important role during the pollen wall development in B. campestris, which may also possess potential importance for male sterility usage in agriculture. © 2014 Institute of Botany, Chinese Academy of Sciences.

  18. PECTATE LYASE-LIKE 9 from Brassica campestris is associated with intine formation.

    Science.gov (United States)

    Jiang, Jingjing; Yao, Lina; Yu, Youjian; Liang, Ying; Jiang, Jianxia; Ye, Nenghui; Miao, Ying; Cao, Jiashu

    2014-12-01

    Brassica campestris pectate lyase-like 9 (BcPLL9) was previously identified as a differentially expressed gene both in buds during late pollen developmental stage and in pistils during fertilization in Chinese cabbage. To characterize the gene's function, antisense-RNA lines of BcPLL9 (bcpll9) were constructed in Chinese cabbage. Self- and cross-fertilization experiments harvested half seed yields when bcpll9 lines were used as pollen donors. In vivo and in vitro pollen germination assays showed that nearly half of the pollen tubes in bcpll9 were irregular with shorter length and uneven surface. Aniline blue staining identified abnormal accumulation of a specific bright blue unknown material in the bcpll9 pollen portion. Scanning electron microscopy observation verified the abnormal outthrust material to be near the pollen germinal furrows. Transmission electron microscopy observation revealed the internal endintine layer was overdeveloped and predominantly occupied the intine. This abnormally formed intine likely induced the wavy structure and growth arrest of the pollen tube in half of the bcpll9 pollen grains, which resulted in less seed yields. Collectively, this study presented a novel PLL gene that has an important function in B. campestris intine formation. Copyright © 2014 Elsevier Ireland Ltd. All rights reserved.

  19. Preferential exclusion of hybrids in mixed pollinations between oilseed rape (Brassica napus) and weedy B. campestris (Brassicaceae)

    DEFF Research Database (Denmark)

    Hauser, T.P.; Bagger Jørgensen, Rikke; Østergård, Hanne

    1997-01-01

    In most experimental hybridizations between oilseed rape (Brassica napus) and weedy B. campestris, either intra- or interspecific pollen has been applied to individual flowers. Under field conditions, however, stigmas will often receive a mixture of the two types of pollen, thereby allowing...... for competition between male gametophytes and/or seeds within pods. To test whether competition influences the success of hybridization, pollen from the two species was mixed in different proportions and applied to stigmas of both species. The resulting seeds were scored for paternity by isozyme and randomly...... survival of hybrid zygotes in B. napus pods. This is in contrast to the higher survival of hybrid seeds in B. napus than in B. campestris pods when pollinations are made with pure pollen. Altogether, the likelihood of a foreign pollen grain producing a seed was much lower on B. napus than on B. campestris...

  20. Cadmium-Induced Hydrogen Accumulation Is Involved in Cadmium Tolerance in Brassica campestris by Reestablishment of Reduced Glutathione Homeostasis.

    Science.gov (United States)

    Wu, Qi; Su, Nana; Chen, Qin; Shen, Wenbiao; Shen, Zhenguo; Xia, Yan; Cui, Jin

    2015-01-01

    Hydrogen gas (H2) was recently proposed as a therapeutic antioxidant and signaling molecule in clinical trials. However, the underlying physiological roles of H2 in plants remain unclear. In the present study, hydrogen-rich water (HRW) was used to characterize the physiological roles of H2 in enhancing the tolerance of Brassica campestris against cadmium (Cd). The results showed that both 50 μM CdCl2 and 50%-saturated HRW induced an increase of endogenous H2 in Brassica campestris seedlings, and HRW alleviated Cd toxicity related to growth inhibition and oxidative damage. Seedlings supplied with HRW exhibited increased root length and reduced lipid peroxidation, similar to plants receiving GSH post-treatment. Additionally, seedlings post-treated with HRW accumulated higher levels of reduced glutathione (GSH) and ascorbic acid (AsA) and showed increased GST and GPX activities in roots. Molecular evidence illustrated that the expression of genes such as GS, GR1 and GR2, which were down-regulated following the addition of Cd, GSH or BSO, could be reversed to varying degrees by the addition of HRW. Based on these results, it could be proposed that H2 might be an important regulator for enhancing the tolerance of Brassica campestris seedlings against Cd, mainly by governing reduced glutathione homeostasis.

  1. Genome-Wide Association Study Dissects the Genetic Architecture of Seed Weight and Seed Quality in Rapeseed (Brassica napus L.)

    OpenAIRE

    Li, Feng; Chen, Biyun; Xu, Kun; Wu, Jinfeng; Song, Weilin; Bancroft, Ian; Harper, Andrea L.; Trick, Martin; Liu, Shengyi; Gao, Guizhen; Wang, Nian; Yan, Guixin; Qiao, Jiangwei; Li, Jun; Li, Hao

    2014-01-01

    Association mapping can quickly and efficiently dissect complex agronomic traits. Rapeseed is one of the most economically important polyploid oil crops, although its genome sequence is not yet published. In this study, a recently developed 60K Brassica Infinium® SNP array was used to analyse an association panel with 472 accessions. The single-nucleotide polymorphisms (SNPs) of the array were in silico mapped using ‘pseudomolecules’ representative of the genome of rapeseed to establish their...

  2. Genome-Wide Association Study Reveals the Genetic Architecture Underlying Salt Tolerance-Related Traits in Rapeseed (Brassica napus L.)

    OpenAIRE

    Wan, Heping; Chen, Lunlin; Guo, Jianbin; Li, Qun; Wen, Jing; Yi, Bin; Ma, Chaozhi; Tu, Jinxing; Fu, Tingdong; Shen, Jinxiong

    2017-01-01

    Soil salinity is a serious threat to agriculture sustainability worldwide. Salt tolerance at the seedling stage is crucial for plant establishment and high yield in saline soils; however, little information is available on rapeseed (Brassica napus L.) salt tolerance. We evaluated salt tolerance in different rapeseed accessions and conducted a genome-wide association study (GWAS) to identify salt tolerance-related quantitative trait loci (QTL). A natural population comprising 368 B. napus cult...

  3. Genome-Wide Association Study Provides Insight into the Genetic Control of Plant Height in Rapeseed (Brassica napus L.).

    Science.gov (United States)

    Sun, Chengming; Wang, Benqi; Yan, Lei; Hu, Kaining; Liu, Sheng; Zhou, Yongming; Guan, Chunyun; Zhang, Zhenqian; Li, Jiana; Zhang, Jiefu; Chen, Song; Wen, Jing; Ma, Chaozhi; Tu, Jinxing; Shen, Jinxiong; Fu, Tingdong; Yi, Bin

    2016-01-01

    Plant height is a key morphological trait of rapeseed. In this study, we measured plant height of a rapeseed population across six environments. This population contains 476 inbred lines representing the major Chinese rapeseed genepool and 44 lines from other countries. The 60K Brassica Infinium® SNP array was utilized to genotype the association panel. A genome-wide association study (GWAS) was performed via three methods, including a robust, novel, nonparametric Anderson-Darling (A-D) test. Consequently, 68 loci were identified as significantly associated with plant height (P 0.1), we found plausible candidates orthologous to the documented Arabidopsis genes involved in height regulation. One significant association found by GWAS colocalized with the established height locus BnRGA in rapeseed. Our results provide insights into the genetic basis of plant height in rapeseed and may facilitate marker-based breeding.

  4. Genome-Wide Association Study Provides Insight into the Genetic Control of Plant Height in Rapeseed (Brassica napus L.

    Directory of Open Access Journals (Sweden)

    Chengming Sun

    2016-07-01

    Full Text Available Plant height is a key morphological trait of rapeseed. In this study, we measured plant height of a rapeseed population across six environments. This population contains 476 inbred lines representing the major Chinese rapeseed genepool and 44 lines from other countries. The 60K Brassica Infinium® SNP array was utilized to genotype the association panel. A genome-wide association study (GWAS was performed via three methods, including a robust, novel, nonparametric Anderson-Darling (A-D test. Consequently, 68 loci were identified as significantly associated with plant height (P 0.1, we found plausible candidates orthologous to the documented Arabidopsis genes involved in height regulation. One significant association found by GWAS colocalized with the established height locus BnRGA in rapeseed. Our results provide insights into the genetic basis of plant height in rapeseed and may facilitate marker-based breeding.

  5. Unraveling the genetic basis of seed tocopherol content and composition in rapeseed (Brassica napus L..

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    Xingxing Wang

    Full Text Available BACKGROUND: Tocopherols are important antioxidants in vegetable oils; when present as vitamin E, tocopherols are an essential nutrient for humans and livestock. Rapeseed (Brassica napus L, AACC, 2 n = 38 is one of the most important oil crops and a major source of tocopherols. Although the tocopherol biosynthetic pathway has been well elucidated in the model photosynthetic organisms Arabidopsis thaliana and Synechocystis sp. PCC6803, knowledge about the genetic basis of tocopherol biosynthesis in seeds of rapeseed is scant. This project was carried out to dissect the genetic basis of seed tocopherol content and composition in rapeseed through quantitative trait loci (QTL detection, genome-wide association analysis, and homologous gene mapping. METHODOLOGY/PRINCIPAL FINDINGS: We used a segregating Tapidor × Ningyou7 doubled haploid (TNDH population, its reconstructed F(2 (RC-F(2 population, and a panel of 142 rapeseed accessions (association panel. Genetic effects mainly contributed to phenotypic variations in tocopherol content and composition; environmental effects were also identified. Thirty-three unique QTL were detected for tocopherol content and composition in TNDH and RC-F(2 populations. Of these, seven QTL co-localized with candidate sequences associated with tocopherol biosynthesis through in silico and linkage mapping. Several near-isogenic lines carrying introgressions from the parent with higher tocopherol content showed highly increased tocopherol content compared with the recurrent parent. Genome-wide association analysis was performed with 142 B. napus accessions. Sixty-one loci were significantly associated with tocopherol content and composition, 11 of which were localized within the confidence intervals of tocopherol QTL. CONCLUSIONS/SIGNIFICANCE: This joint QTL, candidate gene, and association mapping study sheds light on the genetic basis of seed tocopherol biosynthesis in rapeseed. The sequences presented here may be used

  6. Rapeseed (Brassica napus L. as a protein plant species

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    Marinković Radovan

    2010-01-01

    Full Text Available Proteins of plant origin have a profound impact on human and animal lives. It is impossible to solve worldwide nutrition problem without taking into concern needs for proteins. Inadequate nutrition can only be improved by providing adequate proteins. Humans need c. 120g proteins daily, a third of which should come from meat and milk. Certain population categories, such as the sick, children, pregnant women and sportspeople are more sensitive to lack of protein. Oil crops synthesise oil, which is the basic reserve material in seed, but they also synthesise high levels of protein and can serve as protein source for human and animal nutrition. Generally speaking, protein content in seed of rapeseed at site R. Šančevi was from 19.60% (NS-L-74 to 25.93% JR-NS-36, and at site Sombor from 19.26% (NS-L-74 to 24.06% and 24.09% (NS-L-46 and cultivar Mira. Genotype NS-L-74 had the lowest protein content at both testing sites. Higher protein content was evident with spring genotypes than with winter gentypes. .

  7. Detection of Fungus Infection on Petals of Rapeseed (Brassica napus L.) Using NIR Hyperspectral Imaging

    Science.gov (United States)

    Zhao, Yan-Ru; Yu, Ke-Qiang; Li, Xiaoli; He, Yong

    2016-12-01

    Infected petals are often regarded as the source for the spread of fungi Sclerotinia sclerotiorum in all growing process of rapeseed (Brassica napus L.) plants. This research aimed to detect fungal infection of rapeseed petals by applying hyperspectral imaging in the spectral region of 874-1734 nm coupled with chemometrics. Reflectance was extracted from regions of interest (ROIs) in the hyperspectral image of each sample. Firstly, principal component analysis (PCA) was applied to conduct a cluster analysis with the first several principal components (PCs). Then, two methods including X-loadings of PCA and random frog (RF) algorithm were used and compared for optimizing wavebands selection. Least squares-support vector machine (LS-SVM) methodology was employed to establish discriminative models based on the optimal and full wavebands. Finally, area under the receiver operating characteristics curve (AUC) was utilized to evaluate classification performance of these LS-SVM models. It was found that LS-SVM based on the combination of all optimal wavebands had the best performance with AUC of 0.929. These results were promising and demonstrated the potential of applying hyperspectral imaging in fungus infection detection on rapeseed petals.

  8. Characterising variation of branch angle and genome-wide association mapping in rapeseed (Brassica napus L.

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    Jia eLiu

    2016-02-01

    Full Text Available Changes in the rapeseed branch angle alter plant architecture, allowing more efficient light capture as planting density increases. In this study, a natural population of rapeseed was grown in three environments and evaluated for branch angle trait to characterize their phenotypic patterns and genotype with a 60K Brassica Infinium SNP array. Significant phenotypic variation was observed from 20 to 70 degrees. As a result, 25 significant quantitative trait loci (QTL associated with branch angle were identified on chromosomes A2, A3, A7, C3, C5 and C7 by the MLM model in TASSEL 4.0. Orthologs of the functional candidate genes involved in branch angle were identified. Among the key QTL, the peak SNPs were close to the key orthologous genes BnaA.Lazy1 and BnaC.Lazy1 on A3 and C3 homologous genome blocks. With the exception of Lazy (LA orthologous genes, SQUMOSA PROMOTER BINDING PROTEIN LIKE 14 (SPL14 and an auxin-responsive GRETCHEN HAGEN 3 (GH3 genes from Arabidopsis thaliana were identified close to two clusters of SNPs on the A7 and C7 chromosomes.These findings on multiple novel loci and candidate genes of branch angle will be useful for further understanding and genetic improvement of plant architecture in rapeseed.

  9. Characterizing Variation of Branch Angle and Genome-Wide Association Mapping in Rapeseed (Brassica napus L.).

    Science.gov (United States)

    Liu, Jia; Wang, Wenxiang; Mei, Desheng; Wang, Hui; Fu, Li; Liu, Daoming; Li, Yunchang; Hu, Qiong

    2016-01-01

    Changes in the rapeseed branch angle alter plant architecture, allowing more efficient light capture as planting density increases. In this study, a natural population of rapeseed was grown in three environments and evaluated for branch angle trait to characterize their phenotypic patterns and genotype with a 60K Brassica Infinium SNP array. Significant phenotypic variation was observed from 20 to 70°. As a result, 25 significant quantitative trait loci (QTL) associated with branch angle were identified on chromosomes A2, A3, A7, C3, C5, and C7 by the MLM model in TASSEL 4.0. Orthologs of the functional candidate genes involved in branch angle were identified. Among the key QTL, the peak SNPs were close to the key orthologous genes BnaA.Lazy1 and BnaC.Lazy1 on A3 and C3 homologous genome blocks. With the exception of Lazy (LA) orthologous genes, SQUMOSA PROMOTER BINDING PROTEIN LIKE 14 (SPL14) and an auxin-responsive GRETCHEN HAGEN 3 (GH3) genes from Arabidopsis thaliana were identified close to two clusters of SNPs on the A7 and C7 chromosomes. These findings on multiple novel loci and candidate genes of branch angle will be useful for further understanding and genetic improvement of plant architecture in rapeseed.

  10. Soxhlet-assisted matrix solid phase dispersion to extract flavonoids from rape (Brassica campestris) bee pollen.

    Science.gov (United States)

    Ma, Shuangqin; Tu, Xijuan; Dong, Jiangtao; Long, Peng; Yang, Wenchao; Miao, Xiaoqing; Chen, Wenbin; Wu, Zhenhong

    2015-11-15

    Soxhlet-assisted matrix solid phase dispersion (SA-MSPD) method was developed to extract flavonoids from rape (Brassica campestris) bee pollen. Extraction parameters including the extraction solvent, the extraction time, and the solid support conditions were investigated and optimized. The best extraction yields were obtained using ethanol as the extraction solvent, silica gel as the solid support with 1:2 samples to solid support ratio, and the extraction time of one hour. Comparing with the conventional solvent extraction and Soxhlet method, our results show that SA-MSPD method is a more effective technique with clean-up ability. In the test of six different samples of rape bee pollen, the extracted content of flavonoids was close to 10mg/g. The present work provided a simple and effective method for extracting flavonoids from rape bee pollen, and it could be applied in the studies of other kinds of bee pollen. Copyright © 2015 Elsevier B.V. All rights reserved.

  11. Selenium alleviates chromium toxicity by preventing oxidative stress in cabbage (Brassica campestris L. ssp. Pekinensis) leaves.

    Science.gov (United States)

    Qing, Xuejiao; Zhao, Xiaohu; Hu, Chengxiao; Wang, Peng; Zhang, Ying; Zhang, Xuan; Wang, Pengcheng; Shi, Hanzhi; Jia, Fen; Qu, Chanjuan

    2015-04-01

    The beneficial role of selenium (Se) in alleviation of chromium (Cr)-induced oxidative stress is well established. However, little is known about the underlying mechanism. The impacts of exogenous Se (0.1mg/L) on Cr(1mg/L)-induced oxidative stress and antioxidant systems in leaves of cabbage (Brassica campestris L. ssp. Pekinensis) were investigated by using cellular and biochemical approaches. The results showed that supplementation of the medium with Se was effective in reducing Cr-induced increased levels of lipid peroxides and superoxide free radicals (O(-)2(·)), as well as increasing activities of superoxide dismutase (SOD) and peroxidase (POD). Meanwhile, 1mg/L Cr induced loss of plasma membrane integrity, growth inhibition, as well as ultrastructural changes of leaves were significantly reversed due to Se supplementation in the medium. In addition, Se application significantly altered the subcellular distribution of Cr which transported from mitochondria, nucleus and the cell-wall material to the soluble fraction and chloroplasts. However, Se application did no significant alteration of Cr effects on osmotic adjustment accumulating products. The study suggested that Se is able to protect leaves of cabbage against Cr toxicity by alleviation of Cr induced oxidative stress, and re-distribution of Cr in the subcellular of the leaf. Furthermore, free radicals, lipid peroxides, activity of SOD and POD, and subcellular distribution of Cr can be considered the efficient biomarkers to indicate the efficiency of Se to detoxification Cr. Copyright © 2015 Elsevier Inc. All rights reserved.

  12. Global Dynamic Transcriptome Programming of Rapeseed (Brassica napus L. Anther at Different Development Stages.

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    Zhanjie Li

    Full Text Available Rapeseed (Brassica napus L. is an important oil crop worldwide and exhibits significant heterosis. Effective pollination control systems, which are closely linked to anther development, are a prerequisite for utilizing heterosis. The anther, which is the male organ in flowering plants, undergoes many metabolic processes during development. Although the gene expression patterns underlying pollen development are well studied in model plant Arabidopsis, the regulatory networks of genome-wide gene expression during rapeseed anther development is poorly understood, especially regarding metabolic regulations. In this study, we systematically analyzed metabolic processes occurring during anther development in rapeseed using ultrastructural observation and global transcriptome analysis. Anther ultrastructure exhibited that numerous cellular organelles abundant with metabolic materials, such as elaioplast, tapetosomes, plastids (containing starch deposits etc. appeared, accompanied with anther structural alterations during anther development, suggesting many metabolic processes occurring. Global transcriptome analysis revealed dynamic changes in gene expression during anther development that corresponded to dynamic functional alterations between early and late anther developmental stages. The early stage anthers preferentially expressed genes involved in lipid metabolism that are related to pollen extine formation as well as elaioplast and tapetosome biosynthesis, whereas the late stage anthers expressed genes associated with carbohydrate metabolism to form pollen intine and to accumulate starch in mature pollen grains. Finally, a predictive gene regulatory module responsible for early pollen extine formation was generated. Taken together, this analysis provides a comprehensive understanding of dynamic gene expression programming of metabolic processes in the rapeseed anther, especially with respect to lipid and carbohydrate metabolism during pollen

  13. Atrazine-resistant cytoplasmic male-sterile-nigra broccoli obtained by protoplast fusion between cytoplasmic male-sterile Brassica oleracea and atrazine-resistant Brassica campestris.

    Science.gov (United States)

    Christey, M C; Makaroff, C A; Earle, E D

    1991-12-01

    Protoplast fusion was used to combine the cytoplasmic traits of atrazine resistance and male sterility in Brassica oleracea var. italica (broccoli). Leaf protoplasts from broccoli with the petaloid B. nigra type of cytoplasmic male sterility were fused with hypocotyl protoplasts from an atrazine-resistant biotype of B. campestris var. oleifera cv Candle (oilseed rape). A total of 19 colonies regenerated shoots, all of which were broccolilike in phenotype, i.e., lacked trichomes. Four shoots, all from one colony, were atrazine resistant, surviving and growing in the presence of 25 μM atrazine. A leaf piece assay also confirmed that they were atrazine resistant. Molecular analysis showed that they contain chloroplasts from the atrazine-resistant B. campestris parent and mitochondria from the B. nigra parent. No recombination or rearrangement of the mitochondrial genomes in the fusion products was detected. These four plants and their progeny all showed the petaloid B. nigra type of male sterility.

  14. A candidate gene-based association study of tocopherol content and composition in rapeseed (Brassica napus

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    Steffi eFritsche

    2012-06-01

    Full Text Available Rapeseed (Brassica napus L. is the most important oil crop of temperate climates. Rapeseed oil contains tocopherols, also known as vitamin E, which is an indispensable nutrient for humans and animals due to its antioxidant and radical scavenging abilities. Moreover, tocopherols are also important for the oxidative stability of vegetable oils. Therefore, seed oil with increased tocopherol content or altered tocopherol composition is a target for breeding. We investigated the role of nucleotide variations within candidate genes from the tocopherol biosynthesis pathway. Field trials were carried out with 229 accessions from a worldwide B. napus collection which was divided into two panels of 96 and 133 accessions. Seed tocopherol content and composition were measured by HPLC. High heritabilities were found for both traits, ranging from 0.62 to 0.94. We identified polymorphisms by sequencing selected regions of the tocopherol genes from the 96 accession panel. Subsequently, we determined the population structure (Q and relative kinship (K as detected by genotyping with genome-wide distributed SSR markers. Association studies were performed using two models, the structure-based GLM+Q and the PK mixed model. Between 26 and 12 polymorphisms within two genes (BnaX.VTE3.a, BnaA.PDS1.c were significantly associated with tocopherol traits. The SNPs explained up to 16.93 % of the genetic variance for tocopherol composition and up to 10.48 % for total tocopherol content. Based on the sequence information we designed CAPS markers for genotyping the 133 accessions from the 2nd panel. Significant associations with various tocopherol traits confirmed the results from the first experiment. We demonstrate that the polymorphisms within the tocopherol genes clearly impact tocopherol content and composition in B. napus seeds. We suggest that these nucleotide variations may be used as selectable markers for breeding rapeseed with enhanced tocopherol quality.

  15. Genome-Wide Association Study Reveals the Genetic Architecture Underlying Salt Tolerance-Related Traits in Rapeseed (Brassica napus L.

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    Jinxiong Shen

    2017-04-01

    Full Text Available Soil salinity is a serious threat to agriculture sustainability worldwide. Salt tolerance at the seedling stage is crucial for plant establishment and high yield in saline soils; however, little information is available on rapeseed (Brassica napus L. salt tolerance. We evaluated salt tolerance in different rapeseed accessions and conducted a genome-wide association study (GWAS to identify salt tolerance-related quantitative trait loci (QTL. A natural population comprising 368 B. napus cultivars and inbred lines was genotyped with a Brassica 60K Illumina Infinium SNP array. The results revealed that 75 single-nucleotide polymorphisms (SNPs distributed across 14 chromosomes were associated with four salt tolerance-related traits. These SNPs integrated into 25 QTLs that explained 4.21–9.23% of the phenotypic variation in the cultivars. Additionally, 38 possible candidate genes were identified in genomic regions associated with salt tolerance indices. These genes fell into several functional groups that are associated with plant salt tolerance, including transcription factors, aquaporins, transporters, and enzymes. Thus, salt tolerance in rapeseed involves complex molecular mechanisms. Our results provide valuable information for studying the genetic control of salt tolerance in B. napus seedlings and may facilitate marker-based breeding for rapeseed salt tolerance.

  16. Genome-Wide Association Study Reveals the Genetic Architecture Underlying Salt Tolerance-Related Traits in Rapeseed (Brassica napus L.).

    Science.gov (United States)

    Wan, Heping; Chen, Lunlin; Guo, Jianbin; Li, Qun; Wen, Jing; Yi, Bin; Ma, Chaozhi; Tu, Jinxing; Fu, Tingdong; Shen, Jinxiong

    2017-01-01

    Soil salinity is a serious threat to agriculture sustainability worldwide. Salt tolerance at the seedling stage is crucial for plant establishment and high yield in saline soils; however, little information is available on rapeseed (Brassica napus L.) salt tolerance. We evaluated salt tolerance in different rapeseed accessions and conducted a genome-wide association study (GWAS) to identify salt tolerance-related quantitative trait loci (QTL). A natural population comprising 368 B. napus cultivars and inbred lines was genotyped with a Brassica 60K Illumina Infinium SNP array. The results revealed that 75 single-nucleotide polymorphisms (SNPs) distributed across 14 chromosomes were associated with four salt tolerance-related traits. These SNPs integrated into 25 QTLs that explained 4.21-9.23% of the phenotypic variation in the cultivars. Additionally, 38 possible candidate genes were identified in genomic regions associated with salt tolerance indices. These genes fell into several functional groups that are associated with plant salt tolerance, including transcription factors, aquaporins, transporters, and enzymes. Thus, salt tolerance in rapeseed involves complex molecular mechanisms. Our results provide valuable information for studying the genetic control of salt tolerance in B. napus seedlings and may facilitate marker-based breeding for rapeseed salt tolerance.

  17. Characterization of BcMF23a and BcMF23b, two putative pectin methylesterase genes related to pollen development in Brassica campestris ssp. chinensis.

    Science.gov (United States)

    Lin, Sue; Huang, Li; Yu, Xiaolin; Xiong, Xingpeng; Yue, Xiaoyan; Liu, Tingting; Liang, Ying; Lv, Meiling; Cao, Jiashu

    2017-02-01

    Two homologous genes, Brassica campestris Male Fertility 23a (BcMF23a) and Brassica campestris Male Fertility 23b (BcMF23b), encoding putative pectin methylesterases (PMEs) were isolated from Brassica campestris ssp. chinensis (syn. Brassica rapa ssp. chinensis). These two genes sharing high sequence identity with each other were highly expressed in the fertile flower buds but silenced in the sterile ones of genic male sterile line system ('Bcajh97-01A/B'). Results of RT-PCR and in situ hybridization suggested that BcMF23a and BcMF23b were pollen-expressed genes, whose transcripts were first detected at the binucleate pollen and maintained throughout to the mature pollen grains. Western blot indicated that both of the putative BcMF23a and BcMF23b proteins are approximately 40 kDa, which exhibited extracellular localization revealed by transient expression analysis in the onion epidermal cells. The promoter of BcMF23a was active specifically in pollen during the late pollen developmental stages, while, in addition to the pollen, BcMF23b promoter drove an extra gene expression in the valve margins, abscission layer at the base of the first true leaves, taproot and lateral roots in seedlings.

  18. Elevation of secondary metabolites synthesis in Brassica campestris ssp. chinensis L. via exogenous inoculation of Piriformospora indica with appropriate fertilizer.

    Science.gov (United States)

    Khalid, Muhammad; Hassani, Danial; Bilal, Muhammad; Liao, Jianli; Huang, Danfeng

    2017-01-01

    This work evaluated the impact of exogenous soil inoculation of beneficial fungal strain Piriformospora indica on phytochemical changes and the related genes expression of Chinese cabbage (Brassica campestris ssp. chinensis L.) by greenhouse pot experiments. High performance liquid chromatography (HPLC) affirmed that among the different combinations of fungal and organic fertilizer treatments, the phenolic acids and flavonoids were considerably enriched in organic fertilizer and fungi (OP) followed by organic fertilizer, biochar, fungi (OBP) treated plants. The antiradical activity was higher in OP (61.29%) followed by P (60%) and organic fertilizer (OF) (53.84%) inoculated plants which positively correlated with chlorophyll, carotenoids and flavonoids level (Pindica significantly (Pindica. In conclusion, the results revealed that organic fertilizer and P. indica (OP) is the most appropriate combination for improving phytochemical and antiradical properties in Pakchoi.

  19. Effects of foliar dressing of selenite and silicate alone or combined with different soil ameliorants on the accumulation of As and Cd and antioxidant system in Brassica campestris.

    Science.gov (United States)

    Ding, Yongzhen; Wang, Yongjiu; Zheng, Xiangqun; Cheng, Weimin; Shi, Rongguang; Feng, Renwei

    2017-08-01

    This study was conducted to investigate the possibility of using a combined technology to synchronously reduce As and Cd accumulation in the edible parts of Brassica campestris. The results showed that a foliar application of selenite (Se) and silicon (Si) combined with soil ameliorants (including Ca-Mg-P fertilizer, sodium silicate and red mud) showed limited effects on the growth of B. campestris. The As concentration in the leaves of B. campestris in all treatments was below the Chinese safety standard. When sodium silicate and Ca-Mg-P fertilizer were added to the soil, the additional foliar application of Se and Si could in some cases help further reduce the concentrations of As and Cd in the leaves of B. campestris. However, when red mud was applied to the soil, the foliar application of Se and Si enhanced the Cd concentration in the leaves of B. campestris. In most cases, high levels of soil ameliorants plus foliar application of Se and Si significantly enhanced the As concentrations in both the soil solution and the roots of B. campestris but reduced the soil solution Cd concentration and the leaf As concentration. Most of the treatments reduced the thiobarbituric acid reactive substances (TBARS) concentration in the leaves of B. campestris, and the foliar application of Se and Si helped the soil ameliorants alleviate the oxidative stress resulting from As and Cd exposure. In this study, several treatments significantly increased the activities of superoxide dismutase (SOD) and ascorbate peroxidase (APX). However, the enzymes peroxidase (POD) and catalase (CAT) were not induced by most treatments. In summary, the combined treatment of 1gkg-1 Ca-Mg-P fertilizer plus foliar spraying 2mmolL-1 sodium selenite was most effective in reducing the Cd concentration and a rather strong ability to reduce the As concentration and trigger the activities of SOD and APX in the leaves of B. campestris. Copyright © 2017 Elsevier Inc. All rights reserved.

  20. Whole-Genome Re-Alignment Facilitates Development of Specific Molecular Markers for Races 1 and 4 of Xanthomonas campestris pv. campestris, the Cause of Black Rot Disease in Brassica oleracea.

    Science.gov (United States)

    Rubel, Mehede Hassan; Robin, Arif Hasan Khan; Natarajan, Sathishkumar; Vicente, Joana G; Kim, Hoy-Taek; Park, Jong-In; Nou, Ill-Sup

    2017-11-24

    Black rot, caused by Xanthomonas campestris pv. campestris (Xcc), is a seed borne disease of Brassicaceae. Eleven pathogenic races have been identified based on the phenotype interaction pattern of differential brassica cultivars inoculated with different strains. Race 1 and 4 are the two most frequent races found in Brassica oleracea crops. In this study, a PCR molecular diagnostic tool was developed for the identification of Xcc races 1 and 4 of this pathogen. Whole genomic sequences of races 1, 3, 4 and 9 and sequences of three other Xanthomonas pathovars/species (X. campestris pv. incanae (Xci), X. campestris pv. raphani (Xcr) and X.euvesicatoria (Xev) were aligned to identify variable regions among races. To develop specific markers for races 1 and 4, primers were developed from a region where sequences were dissimilar in other races. Sequence-characterized amplified regions (SCAR) and insertion or deletion of bases (InDel) were used to develop each specific set of primers. The specificity of the selected primers was confirmed by PCR tests using genomic DNA of seven different Xcc races, two strains of X. campestris pathovars and other species of bacteria. Bacterial samples of the races 1 and 4 isolates were collected from artificially inoculated cabbage leaves to conduct bio-PCR. Bio-PCR successfully detected the two Xcc isolates. By using our race-specific markers, a potential race 1 strain from the existing Korean Xcc collection was identified. The Xcc race 1 and 4-specific markers developed in this study are novel and can potentially be used for rapid detection of Xcc races through PCR.

  1. Whole-Genome Re-Alignment Facilitates Development of Specific Molecular Markers for Races 1 and 4 of Xanthomonas campestris pv. campestris, the Cause of Black Rot Disease in Brassica oleracea

    Directory of Open Access Journals (Sweden)

    Mehede Hassan Rubel

    2017-11-01

    Full Text Available Black rot, caused by Xanthomonas campestris pv. campestris (Xcc, is a seed borne disease of Brassicaceae. Eleven pathogenic races have been identified based on the phenotype interaction pattern of differential brassica cultivars inoculated with different strains. Race 1 and 4 are the two most frequent races found in Brassica oleracea crops. In this study, a PCR molecular diagnostic tool was developed for the identification of Xcc races 1 and 4 of this pathogen. Whole genomic sequences of races 1, 3, 4 and 9 and sequences of three other Xanthomonas pathovars/species (X. campestris pv. incanae (Xci, X. campestris pv. raphani (Xcr and X. euvesicatoria (Xev were aligned to identify variable regions among races. To develop specific markers for races 1 and 4, primers were developed from a region where sequences were dissimilar in other races. Sequence-characterized amplified regions (SCAR and insertion or deletion of bases (InDel were used to develop each specific set of primers. The specificity of the selected primers was confirmed by PCR tests using genomic DNA of seven different Xcc races, two strains of X. campestris pathovars and other species of bacteria. Bacterial samples of the races 1 and 4 isolates were collected from artificially inoculated cabbage leaves to conduct bio-PCR. Bio-PCR successfully detected the two Xcc isolates. By using our race-specific markers, a potential race 1 strain from the existing Korean Xcc collection was identified. The Xcc race 1 and 4-specific markers developed in this study are novel and can potentially be used for rapid detection of Xcc races through PCR.

  2. Genetic Diversity in Commercial Rapeseed (Brassica napus L. Varieties from Turkey as Revealed by RAPD

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    Özlem ÖZBEK

    2013-02-01

    Full Text Available In cultivated commercial crop species, genetic diversity tends to decrease because of the extensive breeding processes. Therefore, germplasm of commercial crop species, such as Brassica napus L. should be evaluated and the genotypes, which have higher genetic diversity index, should be addressed as potential parental cross materials in breeding programs. In this study, the genetic diversity was analysed by using randomly amplified polymorphic DNA analysis (RAPD technique in nine Turkish commercial rapeseed varieties. The RAPD primers (10-mer oligonucleotides produced 51 scorable loci, 31 loci of which were polymorphic (60.78% and 20 loci (39.22% were monomorphic The RAPD bands were scored as binary matrix data and were analysed using POPGENE version 1.32. At locus level, the values of genetic diversity within population (Hs and total (HT were 0.15 and 0.19 respectively. The genetic differentiation (GST and the gene flow (Nm values between the populations were 0.20 and 2.05 respectively. The mean number of alleles (na, the mean number of effective alleles (nae, and the mean value of genetic diversity (He were 2.00, 1.26, and 0.19 respectively. According to Pearson’s correlation, multiple regression and principal component analyses, eco-geographical conditions in combination had significant effect on genetic indices of commercial B. napus L. varieties were discussed.

  3. Genome-Wide Association Mapping Reveals the Genetic Control Underlying Branch Angle in Rapeseed (Brassica napus L.

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    Hongge Li

    2017-06-01

    Full Text Available Plant architecture is vital not only for crop yield, but also for field management, such as mechanical harvesting. The branch angle is one of the key factors determining plant architecture. With the aim of revealing the genetic control underlying branch angle in rapeseed (Brassica napus L., the positional variation of branch angles on individual plants was evaluated, and the branch angle increased with the elevation of branch position. Furthermore, three middle branches of individual plants were selected to measure the branch angle because they exhibited the most representative phenotypic values. An association panel with 472 diverse accessions was estimated for branch angle trait in six environments and genotyped with a 60K Brassica Infinium® SNP array. As a result of association mapping, 46 and 38 significantly-associated loci were detected using a mixed linear model (MLM and a multi-locus random-SNP-effect mixed linear model (MRMLM, which explained up to 62.2 and 66.2% of the cumulative phenotypic variation, respectively. Numerous highly-promising candidate genes were identified by annotating against Arabidopsis thaliana homologous, including some first found in rapeseed, such as TAC1, SGR1, SGR3, and SGR5. These findings reveal the genetic control underlying branch angle and provide insight into genetic improvements that are possible in the plant architecture of rapeseed.

  4. Genome-wide association study dissects the genetic architecture of seed weight and seed quality in rapeseed (Brassica napus L.).

    Science.gov (United States)

    Li, Feng; Chen, Biyun; Xu, Kun; Wu, Jinfeng; Song, Weilin; Bancroft, Ian; Harper, Andrea L; Trick, Martin; Liu, Shengyi; Gao, Guizhen; Wang, Nian; Yan, Guixin; Qiao, Jiangwei; Li, Jun; Li, Hao; Xiao, Xin; Zhang, Tianyao; Wu, Xiaoming

    2014-08-01

    Association mapping can quickly and efficiently dissect complex agronomic traits. Rapeseed is one of the most economically important polyploid oil crops, although its genome sequence is not yet published. In this study, a recently developed 60K Brassica Infinium(®) SNP array was used to analyse an association panel with 472 accessions. The single-nucleotide polymorphisms (SNPs) of the array were in silico mapped using 'pseudomolecules' representative of the genome of rapeseed to establish their hypothetical order and to perform association mapping of seed weight and seed quality. As a result, two significant associations on A8 and C3 of Brassica napus were detected for erucic acid content, and the peak SNPs were found to be only 233 and 128 kb away from the key genes BnaA.FAE1 and BnaC.FAE1. BnaA.FAE1 was also identified to be significantly associated with the oil content. Orthologues of Arabidopsis thaliana HAG1 were identified close to four clusters of SNPs associated with glucosinolate content on A9, C2, C7 and C9. For seed weight, we detected two association signals on A7 and A9, which were consistent with previous studies of quantitative trait loci mapping. The results indicate that our association mapping approach is suitable for fine mapping of the complex traits in rapeseed. © The Author 2014. Published by Oxford University Press on behalf of Kazusa DNA Research Institute.

  5. Genome-Wide Association Mapping Reveals the Genetic Control Underlying Branch Angle in Rapeseed (Brassica napus L.).

    Science.gov (United States)

    Li, Hongge; Zhang, Liping; Hu, Jihong; Zhang, Fugui; Chen, Biyun; Xu, Kun; Gao, Guizhen; Li, Hao; Zhang, Tianyao; Li, Zaiyun; Wu, Xiaoming

    2017-01-01

    Plant architecture is vital not only for crop yield, but also for field management, such as mechanical harvesting. The branch angle is one of the key factors determining plant architecture. With the aim of revealing the genetic control underlying branch angle in rapeseed (Brassica napus L.), the positional variation of branch angles on individual plants was evaluated, and the branch angle increased with the elevation of branch position. Furthermore, three middle branches of individual plants were selected to measure the branch angle because they exhibited the most representative phenotypic values. An association panel with 472 diverse accessions was estimated for branch angle trait in six environments and genotyped with a 60K Brassica Infinium® SNP array. As a result of association mapping, 46 and 38 significantly-associated loci were detected using a mixed linear model (MLM) and a multi-locus random-SNP-effect mixed linear model (MRMLM), which explained up to 62.2 and 66.2% of the cumulative phenotypic variation, respectively. Numerous highly-promising candidate genes were identified by annotating against Arabidopsis thaliana homologous, including some first found in rapeseed, such as TAC1, SGR1, SGR3, and SGR5. These findings reveal the genetic control underlying branch angle and provide insight into genetic improvements that are possible in the plant architecture of rapeseed.

  6. Nitrogen transfer from Lupinus albus L., Trifolium incarnatum L. and Vicia sativa L. contribute differently to rapeseed (Brassica napus L.) nitrogen nutrition.

    Science.gov (United States)

    Génard, Thaïs; Etienne, Philippe; Laîné, Philippe; Yvin, Jean-Claude; Diquélou, Sylvain

    2016-09-01

    Nitrogen (N) transfer is well documented in legume-cereal intercropping but this is less often reported for legume-Brassica intercrops even though Brassica crops require higher levels of N fertilizers. The present study was carried out to quantify N transfer from legumes (Lupinus albus L., Trifolium incarnatum L. or Vicia sativa L.) to rapeseed (Brassica napus L.) using the split-root (15)N-labelling method. After three months we observed that legumes did not alter the growth of rapeseed. Vetch showed the lowest growth and demonstrated low (15)N shoot to root translocation and no significant N transfer to rapeseed. In contrast, significant (15)N enrichment was found in lupine and clover and (15)N was transferred to the associated rapeseed plants (around 6 and 4 mg N plant(-1), respectively), which contributed 2 to 3% of the rapeseed total N. Additionally, the data revealed that N2 fixation dominated the N nutrition in lupine despite the high N level provided in the donor compartment, suggesting a greater niche segregation between companion plants. Based on the results of this study we suggest that intercropping can be a relevant contributor to rapeseed N nutrition. Among the three legumes tested, clover and lupine seemed to be the best intercropping candidates.

  7. Nitrogen transfer from Lupinus albus L., Trifolium incarnatum L. and Vicia sativa L. contribute differently to rapeseed (Brassica napus L. nitrogen nutrition

    Directory of Open Access Journals (Sweden)

    Thaïs Génard

    2016-09-01

    Full Text Available Nitrogen (N transfer is well documented in legume-cereal intercropping but this is less often reported for legume-Brassica intercrops even though Brassica crops require higher levels of N fertilizers. The present study was carried out to quantify N transfer from legumes (Lupinus albus L., Trifolium incarnatum L. or Vicia sativa L. to rapeseed (Brassica napus L. using the split-root 15N-labelling method. After three months we observed that legumes did not alter the growth of rapeseed. Vetch showed the lowest growth and demonstrated low 15N shoot to root translocation and no significant N transfer to rapeseed. In contrast, significant 15N enrichment was found in lupine and clover and 15N was transferred to the associated rapeseed plants (around 6 and 4 mg N plant−1, respectively, which contributed 2 to 3% of the rapeseed total N. Additionally, the data revealed that N2 fixation dominated the N nutrition in lupine despite the high N level provided in the donor compartment, suggesting a greater niche segregation between companion plants. Based on the results of this study we suggest that intercropping can be a relevant contributor to rapeseed N nutrition. Among the three legumes tested, clover and lupine seemed to be the best intercropping candidates.

  8. [The pTA29-barnase chimeric gene transformation of Brassica campestris L. subsp. chinensis Makino var. parachinensis mediated by agrobacterium].

    Science.gov (United States)

    Cao, Bihao; Meng, Chengmin; Lei, Jianjun; Chen, Guoju

    2008-05-01

    In order to induce male sterility of Brassica campestris L. subsp. chinensis Makino var. parachinensis, we introduced the chimeric pTA29-barnase gene into it by Agrobacteriumtume faciens transformation. We obtained the transgenic plants, and determined them by PCR, Southern blotting and RT-PCR analysis. Results indicated that the RNase (barnase) gene had been transferred into genome of plant, and its expression level was different among transformation plants. All transgenic plants were male sterile; there was no vigor or a little pollen without fertility in the anther of transgenic plants. The transgenic plants failed to produce seeds under the condition self-control pollination, but hybrid seeds set were obtained when these transgenic plants were cross-pollinated artificially with normal pollen from untransformed plants. Progeny from cross-pollinated maintainer line with transgenic plants segregated in the 1:1 for male sterility and male fertility, and these phenotypes corresponded directly to the presence or absence of the chimeri TA29-barnase gene. The male fertile plants of co-separated progenies could die by spraying 10 mg/L PPT in cotyledon seedling stage. The hybrid F1 between male sterility and other varieties showed heterosis in yield and growth. All these show that it is an efficient method to induce male sterility in Brassica campestris L. subsp. chinensis Makino var. parachinensis by TA29-barnase ene, there is potential on heterosis breeding of Brassica campestris L. subsp. chinensis Makino var. parachinensis.

  9. Altered Fruit and Seed Development of Transgenic Rapeseed (Brassica napus) Over-Expressing MicroRNA394

    Science.gov (United States)

    Song, Jian Bo; Shu, Xia Xia; Shen, Qi; Li, Bo Wen; Song, Jun; Yang, Zhi Min

    2015-01-01

    Fruit and seed development in plants is a complex biological process mainly involved in input and biosynthesis of many storage compounds such as proteins and oils. Although the basic biochemical pathways for production of the storage metabolites in plants are well characterized, their regulatory mechanisms are not fully understood. In this study, we functionally identified rapeseed (Brassica napus) miR394 with its target gene Brassica napus LEAF CURLING RESPONSIVENESS (BnLCR) to dissect a role of miR394 during the fruit and seed development. Transgenic rapeseed plants over-expressing miR394 under the control of the cauliflower mosaic virus 35S promoter were generated. miR394 over-expression plants exhibited a delayed flowering time and enlarged size of plants, leaf blade, pods and seed body, but developed seeds with higher contents of protein and glucosinolates (GLS) and lower levels of oil accumulation as compared to wild-type. Over-expression of miR394 altered the fatty acid (FA) composition by increasing several FA species such as C16:0 and C18:0 and unsaturated species of C20:1 and C22:1 but lowering C18:3. This change was accompanied by induction of genes coding for transcription factors of FA synthesis including LEAFY COTYLEDON1 (BnLEC1), BnLEC2, and FUSCA3 (FUS3). Because the phytohormone auxin plays a crucial role in fruit development and seed patterning, the DR5-GUS reporter was used for monitoring the auxin response in Arabidopsis siliques and demonstrated that the DR5 gene was strongly expressed. These results suggest that BnmiR394 is involved in rapeseed fruit and seed development. PMID:25978066

  10. Altered Fruit and Seed Development of Transgenic Rapeseed (Brassica napus Over-Expressing MicroRNA394.

    Directory of Open Access Journals (Sweden)

    Jian Bo Song

    Full Text Available Fruit and seed development in plants is a complex biological process mainly involved in input and biosynthesis of many storage compounds such as proteins and oils. Although the basic biochemical pathways for production of the storage metabolites in plants are well characterized, their regulatory mechanisms are not fully understood. In this study, we functionally identified rapeseed (Brassica napus miR394 with its target gene Brassica napus leaf curling responsiveness (BnLCR to dissect a role of miR394 during the fruit and seed development. Transgenic rapeseed plants over-expressing miR394 under the control of the cauliflower mosaic virus 35S promoter were generated. miR394 over-expression plants exhibited a delayed flowering time and enlarged size of plants, leaf blade, pods and seed body, but developed seeds with higher contents of protein and glucosinolates (GLS and lower levels of oil accumulation as compared to wild-type. Over-expression of miR394 altered the fatty acid (FA composition by increasing several FA species such as C16:0 and C18:0 and unsaturated species of C20:1 and C22:1 but lowering C18:3. This change was accompanied by induction of genes coding for transcription factors of FA synthesis including leafy cotyledon1 (BnLEC1, BnLEC2, and FUSCA3 (FUS3. Because the phytohormone auxin plays a crucial role in fruit development and seed patterning, the DR5-GUS reporter was used for monitoring the auxin response in Arabidopsis siliques and demonstrated that the DR5 gene was strongly expressed. These results suggest that BnmiR394 is involved in rapeseed fruit and seed development.

  11. Identification and fine mapping of a stay-green gene (Brnye1) in pakchoi (Brassica campestris L. ssp. chinensis).

    Science.gov (United States)

    Wang, Nan; Liu, Zhiyong; Zhang, Yun; Li, Chengyu; Feng, Hui

    2017-12-05

    Using bulked segregant analysis combined with next-generation sequencing, we delimited the Brnye1 gene responsible for the stay-green trait of nye in pakchoi. Sequence analysis identified Bra019346 as the candidate gene. "Stay-green" refers to a plant trait whereby leaves remain green during senescence. This trait is useful in the cultivation of pakchoi (Brassica campestris L. ssp. chinensis), which is marketed as a green leaf product. This study aimed to identify the gene responsible for the stay-green trait in pakchoi. We identified a stay-green mutant in pakchoi, which we termed "nye". Genetic analysis revealed that the stay-green trait is controlled by a single recessive gene, Brnye1. Using the BSA-seq method, a 3.0-Mb candidate region was mapped on chromosome A03, which helped us localize Brnye1 to an 81.01-kb interval between SSR markers SSRWN27 and SSRWN30 via linkage analysis in an F2 population. We identified 12 genes in this region, 11 of which were annotated based on the Brassica rapa annotation database, and one was a functionally unknown gene. An orthologous gene of the Arabidopsis gene AtNYE1, Bra019346, was identified as the potential candidate for Brnye1. Sequence analysis revealed a 40-bp insertion in the second exon of Bra019346 in nye, which generated the TAA stop codon. A candidate gene-specific Indel marker in 1561 F2 individuals showed perfect cosegregation with Brnye1 in the nye mutant. These results provide a foundation for uncovering the molecular mechanism of the stay-green trait in pakchoi.

  12. The Dynamic Growth Exhibition and Accumulation of Cadmium of Pak Choi (Brassica campestris L. ssp. chinensis Grown in Contaminated Soils

    Directory of Open Access Journals (Sweden)

    Hung-Yu Lai

    2013-10-01

    Full Text Available The accumulation of heavy metals, especially cadmium (Cd, in leafy vegetables was compared with other vegetables. Pak choi (Brassica campestris L. ssp. chinensis is a leafy vegetable consumed in Taiwan and its safety for consumption after growing in contaminated soils is a public concern. A pot experiment (50 days was conducted to understand the dynamic accumulation of Cd by pak choi grown in artificially contaminated soils. The edible parts of pak choi were sampled and analyzed every 2–3 days. The dry weight (DW of pak choi was an exponential function of leaf length, leaf width, and chlorophyll content. The accumulation of Cd increased when the soil Cd concentration was raised, but was kept at a constant level during different growth stages. Pak choi had a high bioconcentration factor (BCF = ratio of the concentration in the edible parts to that in the soils, at values of 3.5–4.0. The consumption of pak choi grown in soils contaminated at levels used in this study would result in the ingestion of impermissible amounts of Cd and could possibly have harmful effects on health.

  13. Sulfate sorption on rape (Brassica campestris L.) straw biochar, loess soil and a biochar-soil mixture.

    Science.gov (United States)

    Zhao, Baowei; Nan, Xujun; Xu, Huan; Zhang, Tao; Ma, Fengfeng

    2017-10-01

    The effects of biochar amendment on sulfur behavior in soils are unknown. In this paper, sulfate (SO42-) sorption on rape (Brassica campestris L.) straw biochar produced at 600 °C (BC), loess soil (soil) and a 1:9 (w/w) biochar-soil mixture (BC-soil) was investigated by batch experiments. The effects of contact time, initial SO42- concentration, temperature and solution pH value on sorption were tested. Kinetics, isotherms and thermodynamics for sorption were investigated. Pre- and post-sorption characterizations of BC and soil were respectively studied using Fourier transform infrared (FTIR) and X-ray diffraction (XRD) spectroscopy, respectively. It has been shown that SO42- sorption on three sorbents was well described by pseudo-second-order kinetic model. The sorption isotherms could be fitted using Langmuir and Freundlich models. BC amendment did not increase the sorption capacity of soil for SO42-. The values of ΔG0, ΔH0 and ΔS0 indicated that the nature of sorption was spontaneous, endothermic and feasible. Increasing solution pH value led to a slight reduction in the sorption amount of SO42-. Sulfate was mainly sorbed onto BC through electrostatic interaction, whereas onto the soil via electrostatic interaction and formation of poorly soluble CaSO4. Copyright © 2017 Elsevier Ltd. All rights reserved.

  14. Genetic Damage Induced by a Food Coloring Dye (Sunset Yellow on Meristematic Cells of Brassica campestris L.

    Directory of Open Access Journals (Sweden)

    Kshama Dwivedi

    2015-01-01

    Full Text Available We have performed the present piece of work to evaluate the effect of synthetic food coloring azo dye (sunset yellow on actively dividing root tip cells of Brassica campestris L. Three doses of azo dye were administered for the treatment of actively dividing root tip cells, namely, 1%, 3%, and 5%, for 6-hour duration along with control. Mitotic analysis clearly revealed the azo dye induced endpoint deviation like reduction in the frequency of normal divisions in a dose dependent manner. Mitotic divisions in the control sets were found to be perfectly normal while dose based reduction in MI was registered in the treated sets. Azo dye has induced several chromosomal aberrations (genotoxic effect at various stages of cell cycle such as stickiness of chromosomes, micronuclei formation, precocious migration of chromosome, unorientation, forward movement of chromosome, laggards, and chromatin bridge. Among all, stickiness of chromosomes was present in the highest frequency followed by partial genome elimination as micronuclei. The present study suggests that extensive use of synthetic dye should be forbidden due to genotoxic and cytotoxic impacts on living cells. Thus, there is an urgent need to assess potential hazardous effects of these dyes on other test systems like human and nonhuman biota for better scrutiny.

  15. Genetic damage induced by a food coloring dye (sunset yellow) on meristematic cells of Brassica campestris L.

    Science.gov (United States)

    Dwivedi, Kshama; Kumar, Girjesh

    2015-01-01

    We have performed the present piece of work to evaluate the effect of synthetic food coloring azo dye (sunset yellow) on actively dividing root tip cells of Brassica campestris L. Three doses of azo dye were administered for the treatment of actively dividing root tip cells, namely, 1%, 3%, and 5%, for 6-hour duration along with control. Mitotic analysis clearly revealed the azo dye induced endpoint deviation like reduction in the frequency of normal divisions in a dose dependent manner. Mitotic divisions in the control sets were found to be perfectly normal while dose based reduction in MI was registered in the treated sets. Azo dye has induced several chromosomal aberrations (genotoxic effect) at various stages of cell cycle such as stickiness of chromosomes, micronuclei formation, precocious migration of chromosome, unorientation, forward movement of chromosome, laggards, and chromatin bridge. Among all, stickiness of chromosomes was present in the highest frequency followed by partial genome elimination as micronuclei. The present study suggests that extensive use of synthetic dye should be forbidden due to genotoxic and cytotoxic impacts on living cells. Thus, there is an urgent need to assess potential hazardous effects of these dyes on other test systems like human and nonhuman biota for better scrutiny.

  16. Molecular cloning and expression analysis of a Cu/Zn SOD gene (BcCSD1) from Brassica campestris ssp. chinensis.

    Science.gov (United States)

    Cui, Lijie; Huang, Qiang; Yan, Bin; Wang, Yao; Qian, Zhongyin; Pan, Jingxian; Kai, Guoyin

    2015-11-01

    Superoxide dismutases (SODs) are a family of metalloproteins extensively exists in eukaryote, which plays an essential role in stress-tolerance of higher plants. A full-length cDNA encoding Cu/Zn SOD (BcCSD1) was isolated from young seedlings of non-heading Chinese cabbage (Brassica campestris ssp. chinensis) by rapid amplification of cDNA ends (RACE). Bioinformatics analysis revealed that BcCSD1 belonged to the plant SOD super family and had the closest relationship with SOD from Brassica napus. Tissue expression pattern analysis revealed that the BcCSD1 was constitutively expressed in all the tested tissues, and strongest in leaf, moderate in stem, lowest in root. The expression profiles under different stress treatments such as drought, NaCl, high temperature and ABA were also investigated, and the results revealed that BcCSD1 was a stress-responsive gene, especially to ABA. These results provide useful information for further understanding the role of BcCSD1 resistant to abiotic stress in Brassica campestris in the future. Copyright © 2014 Elsevier Ltd. All rights reserved.

  17. Xanthomonas campestris pv. campestris race 1 is the main causal ...

    African Journals Online (AJOL)

    Severe outbreaks of bacterial black rot caused by Xanthomonas campestris pv. campestris (Xcc) were observed in Brassica production fields of Southern Mozambique. The causal agent of the disease in the Mahotas and Chòkwé districts was identified and characterised. In total, 83 Xanthomonas-like strains were isolated ...

  18. Role of nitrification inhibitor DMPP (3, 4-dimethylpyrazole phosphate) in NO(3-)-N accumulation in greengrocery( Brassica campestris L. ssp. chinensis) and vegetable soil.

    Science.gov (United States)

    Xu, Chao; Wu, Liang-huan; Ju, Xiao-tang; Zhang, Fu-suo

    2005-01-01

    The influence of nitrification inhibitor (NI) 3, 4-dimethylpyrazole phosphate (DMPP) on nitrate accumulation in greengrocery (Brassica campestris L. ssp. chinensis) and vegetable soil at surface layer were investigated in field experiments in 2002 and 2003. Results showed that NI DMPP took no significant effect on yields of edible parts of greengrocery, but it could significantly decrease NO(3-)-N concentration in greengrocery and in vegetable soil at surface layer. In addition, NI DMPP could reduce the NO(3-)-N concentration during the prophase stage of storage.

  19. Dynamic transcriptome analysis reveals AP2/ERF transcription factors responsible for cold stress in rapeseed (Brassica napus L.).

    Science.gov (United States)

    Du, Chunfang; Hu, Kaining; Xian, Shuanshi; Liu, Chunqing; Fan, Jianchun; Tu, Jinxing; Fu, Tingdong

    2016-06-01

    The APETALA2/ethylene response factor (AP2/ERF) transcription factor (TF) superfamily plays an important regulatory role in signal transduction of the plant responses to various stresses including low temperature. Significant progress has been made in understanding the mechanism of cold resistance in Brassica napus, an important oilseed crop. However, comprehensive studies on the induction and activity of these TFs under low temperature have been lacking. In this study, 132 AP2/ERF genes were identified by transcriptome sequencing of rapeseed leaves exposed to 0, 2, 6, 12, and 24 h of low (4 °C) temperature stress. The genes were classified into 4 subfamilies (AP2, DREB, ERF, and RAV) and 13 subgroups, among which the DREB subfamily and ERF subfamily contained 114 genes, no genes were assigned to soloist or DREB A3 subgroups. One hundred and eighteen genes were located on chromosomes A1 to C9. GO functional analysis and promoter sequence analysis revealed that these genes are involved in many molecular pathways that may enhance cold resistance in plants, such as the low-temperature responsiveness, methyl jasmonate, abscisic acid, and ethylene-responsiveness pathways. Their expression patterns revealed dynamic control at different times following initiation of cold stress; the RAV and DREB subfamilies were expressed at the early stage of cold stress, whereas the AP2 subfamily was expressed later. Quantitative PCR analyses of 13 cold-induced AP2/ERF TFs confirmed the accuracy of above results. This study is the first dynamic analysis of the AP2/ERF TFs responsible for cold stress in rapeseed. These findings will serve as a reference for future functional research on transcription in rapeseed.

  20. A genome-wide association study of plant height and primary branch number in rapeseed (Brassica napus).

    Science.gov (United States)

    Li, Feng; Chen, Biyun; Xu, Kun; Gao, Guizhen; Yan, Guixin; Qiao, Jiangwei; Li, Jun; Li, Hao; Li, Lixia; Xiao, Xin; Zhang, Tianyao; Nishio, Takeshi; Wu, Xiaoming

    2016-01-01

    Crop plant architecture plays a highly important role in its agronomic performance. Plant height (PH) and primary branch number (PB) are two major factors that affect the plant architecture of rapeseed (Brassica napus). Previous studies have shown that these two traits are controlled by multiple quantitative trait loci (QTL); however, QTLs have not been delimited to regions less than 10cM. Genome-wide association study (GWAS) is a highly efficient approach for identifying genetic loci controlling traits at relatively high resolution. In this study, variations in PH and PB of a panel of 472 rapeseed accessions that had previously been analyzed by a 60k SNP array were investigated for three consecutive years and studied by GWAS. Eight QTLs on chromosome A03, A05, A07 and C07 were identified for PH, and five QTLs on A01, A03, A07 and C07 were identified for PB. Although most QTLs have been detected in previous studies based on linkage analyses, the two QTLs of PH on A05 and the QTL of PB on C07 were novel. In the genomic regions close to the GWAS peaks, orthologs of the genes involved in flower development, phytohormone biosynthesis, metabolism and signaling in Arabidopsis were identified. Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.

  1. Genome-Wide Association Study Dissecting the Genetic Architecture Underlying the Branch Angle Trait in Rapeseed (Brassica napus L.).

    Science.gov (United States)

    Sun, Chengming; Wang, Benqi; Wang, Xiaohua; Hu, Kaining; Li, Kaidi; Li, Zhanyu; Li, San; Yan, Lei; Guan, Chunyun; Zhang, Jiefu; Zhang, Zhenqian; Chen, Song; Wen, Jing; Tu, Jinxing; Shen, Jinxiong; Fu, Tingdong; Yi, Bin

    2016-09-20

    The rapeseed branch angle is an important morphological trait because an adequate branch angle enables more efficient light capture under high planting densities. Here, we report that the average angle of the five top branches provides a reliable representation of the average angle of all branches. Statistical analyses revealed a significantly positive correlation between the branch angle and multiple plant-type and yield-related traits. The 60 K Brassica Infinium(®) single nucleotide polymorphism (SNP) array was utilized to genotype an association panel with 520 diverse accessions. A genome-wide association study was performed to determine the genetic architecture of branch angle, and 56 loci were identified as being significantly associated with the branch angle trait via three models, including a robust, novel, nonparametric Anderson-Darling (A-D) test. Moreover, these loci explained 51.1% of the phenotypic variation when a simple additive model was applied. Within the linkage disequilibrium (LD) decay ranges of 53 loci, we observed plausible candidates orthologous to documented Arabidopsis genes, such as LAZY1, SGR2, SGR4, SGR8, SGR9, PIN3, PIN7, CRK5, TIR1, and APD7. These results provide insight into the genetic basis of the branch angle trait in rapeseed and might facilitate marker-based breeding for improvements in plant architecture.

  2. Effects of intensive and alternative production systems on the technological and quality parameters of rapeseed seed (Brassica napus L. 'Siska').

    Science.gov (United States)

    Turinek, Maja; Bavec, Martina; Repič, Milan; Turinek, Matjaž; Krajnc, Andreja Urbanek; Möllers, Christian; Tres, Alba; Bavec, Franc

    2017-06-01

    Organic production is widely assumed to affect quality and nutritional parameters of arable crops. A field experiment was started in 2009 following integrated (INT), organic (ORG) and biodynamic (BD) production standards for wheat, maize and rapeseed production. With resort to standard analytical procedures and chemometrics, compositional parameters of Brassica napus L. 'Siska' seed (water, protein, oil and glucosinolate content) by non-destructive near-infrared spectroscopy (NIRS), and fatty acid composition determined by gas chromatography, were assessed. The BD and ORG production systems positively influenced oleic fatty acid and oil content in comparison to INT, which had higher levels of protein and water content (19.8% and 4.7%, respectively), as well as linolenic (3.8%), gadoleic (12.6%) and hexadecadienoic (15.5%) fatty acids. Increases in the listed parameters were linked to mineral fertilizer application in the INT production system. With principal component analysis (PCA) the INT samples were clearly differentiated. The PCA results were influenced by differences in linolenic, gadoleic and behenic fatty acid levels as well as protein and water content. Because quality parameters in rapeseed are increased in alternative production systems, production with an understanding of the soil processes and yield formation presents an opportunity for ORG and BD farmers. © 2016 Society of Chemical Industry. © 2016 Society of Chemical Industry.

  3. Effects of Temperature on Systemic Infection and Symptom Expression of Turnip mosaic virus in Chinese cabbage (Brassica campestris

    Directory of Open Access Journals (Sweden)

    Bong Nam Chung

    2015-12-01

    Full Text Available Using the Chinese cabbage (Brassica campestris cultivar ‘Chun-goang’ as a host and turnip mosaic virus (TuMV as a pathogen, we studied the effects of ambient temperature (13°C, 18°C, 23°C, 28°C and 33°C on disease intensity and the speed of systemic infection. The optimal temperature for symptom expression of TuMV was 18–28°C. However, symptoms of viral infection were initiated at 23–28°C and 6 days post infection (dpi. Plants maintained at 33°C were systemically infected as early as 6 dpi and remained symptomless until 12 or 22 dpi, depending on growth stage at the time of inoculation. It took 45 days for infection of plants grown at 13°C. Quantitative real-time polymerase chain reaction (q-PCR results showed that the accumulation of virus coat protein was greater in plants grown at 23–28°C. The speed of systemic infection increased linearly with rising ambient temperature, up to 23°C. The zero-infection temperature was 10.1°C. To study the effects of abruptly elevated temperatures on systemic infection, plants inoculated with TuMV were maintained at 10°C for 20 d; transferred to a growth chamber at temperatures of 13°C, 18°C, 23°C, 28°C, or 33°C for 1, 2, or 3 d; and then moved back to 10°C. The numbers of plants infected increased as duration of exposure to higher temperatures and dpi increased.

  4. Pollination of Rapeseed (Brassica napus by Africanized Honeybees (Hymenoptera: Apidae on Two Sowing Dates

    Directory of Open Access Journals (Sweden)

    EMERSON D. CHAMBÓ

    2014-12-01

    Full Text Available In this study, performed in the western part of the state of Paraná, Brazil, two self-fertile hybrid commercial rapeseed genotypes were evaluated for yield components and physiological quality using three pollination tests and spanning two sowing dates. The treatments consisted of combinations of two rapeseed genotypes (Hyola 61 and Hyola 433, three pollination tests (uncovered area, covered area without insects and covered area containing a single colony of Africanized Apis mellifera honeybees and two sowing dates (May 25th, 2011 and June 25th, 2011. The presence of Africanized honeybees during flowering time increased the productivity of the rapeseed. Losses in the productivity of the hybrids caused by weather conditions unfavorable for rapeseed development were mitigated through cross-pollination performed by the Africanized honeybees. Weather conditions may limit the foraging activity of Africanized honeybees, causing decreased cross-pollination by potential pollinators, especially the Africanized A. mellifera honeybee. The rapeseed hybrids respond differently depending on the sowing date, and the short-cycle Hyola 433 hybrid is the most suitable hybrid for sowing under less favorable weather conditions.

  5. Evaluation of seed and oil yield stability in NS rapeseed cultivars (Brassica napus L

    Directory of Open Access Journals (Sweden)

    Marjanović-Jeromela Ana

    2011-01-01

    Full Text Available Rapeseed trials performed in the period 2007-2010 were analyzed to evaluate seed and oil yield stability in NS rapeseed cultivars in changeable environmental conditions of northern Serbia. Seed yield, oil content and yield for 40 winter and 9 spring rapeseed cultivars were analyzed. It was found that the influence of year on seed and oil yield was most significant. Genotype (cultivars by environment (year interaction was further analyzed using AMMI (Additive Main Effects and Multiplicative Interaction model. In the environmental conditions present during the trial in Rimski Šančevi according to the analysis of regression coefficient (bi and ecovalence (Wi and AMMI model, winter cultivars Nena and NS-L-102 were the most stable and high seed yielding, and hybrid cultivar NS-H-R-3 was singled out for oil yield. These cultivars are recommended for implementation in future breeding programs and for growing in the conditions described in this paper.

  6. Inheritance of rapeseed (Brassica napus)-specific RAPD markers and a transgene in the cross B.juncea x (B.juncea x B.napus)

    DEFF Research Database (Denmark)

    Frello, S.; Hansen, K.R.; Jensen, J.

    1995-01-01

    We have examined the inheritance of 20 rapeseed (Brassica napus)-specific RAPD (randomly amplified polymorphic DNA) markers from transgenic, herbicide-tolerant rapeseed in 54 plants of the BC1 generation from the cross B. juncea x (B. juncea x B. napus). Hybridization between B. juncea and B. napus......, with B. juncea as the female parent, was successful both in controlled crosses and spontaneously in the field. The controlled backcrossing of selected hybrids to B. juncea, again with B. juncea as the female parent, also resulted in many seeds. The BC1 plants contained from 0 to 20 of the rapeseed RAPD...... markers, and the frequency of inheritance of individual RAPD markers ranged from 19% to 93%. The transgene was found in 52% of the plants analyzed. Five synteny groups of RAPD markers were identified. In the hybrids pollen fertility was 0-28%. The hybrids with the highest pollen fertility were selected...

  7. Comparative study of the floral biology and of the response of productivity to insect visitation in two rapeseed cultivars (Brassica napus L. in Rio Grande do Sul

    Directory of Open Access Journals (Sweden)

    B Blochtein

    Full Text Available Planning the artificial pollination of agricultural crops requires knowledge of the floral biology and reproductive system of the crop in question. Many studies have shown that rapeseed (Brassica napus Linnaeus is self-compatible and self-pollinated, but its productivity may be increased by insect visitation. In the present study, the floral biology and the response of productivity to insect visitation of two rapeseed cultivars (Hyola 420 and Hyola 61 were analyzed and compared in three regions of Rio Grande do Sul, Brazil. The rapeseed flowers presented three stages during anthesis, with the time periods varying between the cultivars. Both cultivars are self-compatible, but free visitation of insects increased productivity by 17% in the Hyola 420 cultivar and by approximately 30% in the Hyola 61 cultivar. Therefore, it is concluded that the cultivar Hyola 61 is more dependent on insect pollination than Hyola 420.

  8. Comparative study of the floral biology and of the response of productivity to insect visitation in two rapeseed cultivars (Brassica napus L.) in Rio Grande do Sul.

    Science.gov (United States)

    Blochtein, B; Nunes-Silva, P; Halinski, R; Lopes, L A; Witter, S

    2014-11-01

    Planning the artificial pollination of agricultural crops requires knowledge of the floral biology and reproductive system of the crop in question. Many studies have shown that rapeseed (Brassica napus Linnaeus) is self-compatible and self-pollinated, but its productivity may be increased by insect visitation. In the present study, the floral biology and the response of productivity to insect visitation of two rapeseed cultivars (Hyola 420 and Hyola 61) were analyzed and compared in three regions of Rio Grande do Sul, Brazil. The rapeseed flowers presented three stages during anthesis, with the time periods varying between the cultivars. Both cultivars are self-compatible, but free visitation of insects increased productivity by 17% in the Hyola 420 cultivar and by approximately 30% in the Hyola 61 cultivar. Therefore, it is concluded that the cultivar Hyola 61 is more dependent on insect pollination than Hyola 420.

  9. Effects of different dates of transplanting on rapeseed (Brassica napus L.) yield and its components as second crop after rice in Ghilan (Rasht) conditions

    OpenAIRE

    Mohammad javad Golmohammadi; Majid Nahvi

    2016-01-01

    An experiment conducted to study the effects of transplanting dates on rapeseed (Brassica napus L.) yield and its components as second crop after rice in Agriculture Faculty of Ghlilan University. This research was conducted in a Randomized Complete Block Design (RCBD) with 3 replications on the PF (sarigol) cultivar. Treatments consisted various dates of transplanting in cluding 1st November, 21st November, 11st December and 31st December. The results showed that the effect of different date...

  10. Unfermented recalcitrant polysaccharide structures from rapeseed (Brassica napus) meal in pigs

    NARCIS (Netherlands)

    Pustjens, A.M.; Vries, de S.; Bakuwel, M.; Gruppen, H.; Gerrits, W.J.J.; Kabel, M.A.

    2014-01-01

    Unprocessed and acid-extruded rapeseed meal (RSM) was fed to pigs as the only source of non-starch polysaccharides (NSP) and protein. Unfermented carbohydrate structures were analyzed. Acid-extrusion seemed to increase rigidness of the NSP-matrix in vivo, without affecting NSP-fermentability.

  11. Present state and prospects of breeding rapeseed (Brassica napus) with a maximum erucic acid content for industrial applications. Stand und Perspektiven der Zuechtung von Raps (Brassica napus L. ) mit hohem Erucasaeure-Gehalt im Oel fuer industrielle Nutzungszwecke

    Energy Technology Data Exchange (ETDEWEB)

    Luhs, W. (Inst. fuer Pflanzenbau und Pflanzenzuechtung 1, Giessen (Germany)); Friedt, W. (Inst. fuer Pflanzenbau und Pflanzenzuechtung 1, Giessen (Germany))

    1994-01-01

    Rapeseed oil with proportions of erucic acid (C22:1) substantially higher than the level found in traditional cultivars (ca. 50% C22:1) are sought by breeders and chemists for use in wellknown industrial processes and products. In a first step available rapeseed and Brassica germplasm was screened for high erucic acid content. Following conventional breeding procedures (e.g. pedigree selection) promising rapeseed genotypes were crossed and the progeny were selected due to genetic variation of oil content and quality. Since rapeseed (B. napus L.) is amenable to improvement through biotechnology as well, further breeding progress was achieved by application of cell and tissue culture techniques, e.g., microspore culture for the production of doubled-haploid lines. Furthermore, an impressive strategy to increase genetic variation is the resynthesis of rapeseed, i.e., by crossing the original ancestors, B. rapa and B. oleracea, accomplished by embryo rescue technique circumventing existing incompatibility barriers. Following this way we have carried out crosses between b. rapa ssp. trilocularis ('Yellow sarson') and several selected cauliflowers in order to create new oilseed rape germplasm with high erucic acid content. The offspring display desirable variation in the content of major fatty acids. Through introgression of resynthesized germplasm into conventional high-erucic acid rapeseed material it should be possible to produce recombinant breeding lines with an erucic acid content of 60% or even more. (orig.)

  12. Caracterização de isolados de Xanthomonas campestris pv campestris de sistemas de produção orgânico e reação de brássicas à podridão-negra Characterization of strains of Xanthomonas campestris pv campestris from organic farming systems and reaction of brassicas to black rot

    Directory of Open Access Journals (Sweden)

    Liliana Andréa dos Santos

    2008-12-01

    Full Text Available Noventa isolados de Xanthomonas campestris pv. campestris (Xcc de brássicas oriundas de sistemas de produção orgânico das Zonas da Mata e Agreste de Pernambuco foram caracterizados com base na sensibilidade a antibióticos e sulfato de cobre e atividade de esterase. A maioria apresentou alta sensibilidade à tetraciclina (76,6%, eritromicina (63,3% e estreptomicina (63,3%, resistência à amoxicilina (70%, gentamicina (40,0% e norfloxacin (45,5% e média sensibilidade (44,4% ou resistência (44,4% à neomicina. Cinqüenta e cinco isolados de Xcc foram resistentes ao sulfato de cobre na concentração de 50 mg/mL e todos foram sensíveis ao produto na concentração de 200 mg/mL. Atividade de esterase foi apresentada por 92,22% dos isolados. A análise Euclidiana por ligação simples evidenciou variabilidade entre os isolados separando-os em sete grupos de similaridade. Foi estudada também a reação de 14 cultivares de brássicas à podridão-negra, utilizando o isolado "B21" de Xcc. As cultivares diferiram significativamente entre si em relação ao período de incubação, incidência e severidade final da doença. Os maiores valores de severidade final da doença foram verificados em brócolos "Ramoso", couve-flor "Bola de Neve" e "Piracicaba de Verão", e repolho "Chato de Quintal". Os híbridos de couve-chinesa "AF 70", "AF 72", "AF 69" e "AF 66" mostraram-se altamente resistentes à doença, enquanto que brócolos "Ramoso" e "Precoce Piracicaba", couve-flor "Piracicaba de Verão" e "Híbrido Cindy" e repolho "60 Dias" foram medianamente resistentes.Ninety strains of Xanthomonas campestris pv. campestris (Xcc from brassicas grown under organic farming systems in the "Mata" and "Agreste" regions of Pernambuco, Brazil, were characterized based upon sensitivity to antibiotics and copper sulfate, and esterase activity. Most of the strains showed high sensitivity to tetracycline (76.6%, erythromycin (63.3% and streptomycin (63

  13. Enhancement of growth and nutrient uptake of rapeseed (Brassica napus L.) by applying mineral nutrients and biofertilizers.

    Science.gov (United States)

    Yasari, Esmaeil; Azadgoleh, M A Esmaeili; Mozafari, Saedeh; Alashti, Mahsa Rafati

    2009-01-15

    For investigating the effect of chemical fertilizer as well as biofertilizers on seed yield and quality i.e. oil, protein and nutrients concentration of rapeseed (Brassica napus L.), a split-plot fertilizers application experimental design in 4 replications was carried out during the 2005-2006 growing season, at the Gharakheil Agricultural Research Station in the Mazandaran province of Iran. Rapeseed was grown as a second crop in rotation after rice. Biofertilizers treatments were two different levels: control (no seed inoculation) and seeds inoculation with a combination of Azotobacter chroococcum and Azosprillum brasilense and Azosprillum lipoferum, as main plot and chemical fertilizers comprised N, P, K and their combinations, NPKS and NPK Zn as sub plots. The maximum value of seed yield obtained at (BF+NPK Zn) 3421.2 kg h(-1) corresponding to 244.5 pods per plant and maximum concentration of Zn in leaves as well as seeds. The highest weight of 1000 seeds (4.45 g) happened to obtain at (BF+NPK S) which coinciding with the maximum K levels in leaves. The highest number of branches was obtained at (BF+NPK Zn) with 4.43 branches per plant i.e., 46.2% increase over the control. The maximum value of rapeseed oil content 47.73% obtained at T16 (BF+NK) but maximum protein concentration of seed obtained at T12 (BF+N). Overall the results indicated that inoculation resulted in increase in seeds yield (21.17%), number of pods per plant (16.05%), number of branches (11.78%), weight of 1000 grain (2.92%), oil content of seeds (1.73%) and protein (3.91%) but decrease (-0.24%) in number of seeds per pods comparing to non-Biofertilizers treatments. Irrespective to the treatments, results showed that application of Biofertilizers coincided with 3.86, 0.82, 2.25, 0.75 and 0.91% increase in concentrations of N, P, K, S and Zn in the seeds over the non-Biofertilizers treatments.

  14. Detection of the plant pathogenic bacterium Xanthomonas campestris pv. Campestris in seed extracts of Brassica sp. Applying fluorescent antibodies and flow cytometry.

    Science.gov (United States)

    Chitarra, L G; Langerak, C J; Bergervoet, J H W; van den Bulk, R W

    2002-02-01

    Xanthomonas campestris pv. campestris (Xcc) is a seed-transmitted plant pathogenic bacterium that causes black rot of crucifers. Seed lots and plants are screened for contamination with this pathogen using plating or serological assays. These methods, however, are time consuming and not very sensitive, respectively. Therefore, flow cytometry (FCM) was evaluated as a tool for the rapid detection and quantification of Xcc cells labeled with a mixture of specific fluorescein isothicyanate (FITC)-monoclonal antibodies (mAb) in pure culture, in mixed cultures of Xcc with either the common saprophyte Pseudomonas fluorescens (Psf) or a nonpathogenic X. campestris isolate (Xc), and in crude seed extracts. The mAb 18G12, conjugated with FITC, was tested at dilutions of 1:50, 1:100, 1:200, and 1:400. For mixed suspensions of Xcc and Psf, mAb 18G12 was used at a dilution of 1:100. The combination of mAbs 18G12, 2F4, and 20H6, all conjugated with FITC, was used at a dilution of 1:100 for the detection and quantification of Xcc cells in mixed suspensions containing Xcc and Xc and in crude seed extracts. The analyses were performed with a Coulter EPICS XL-MCL flow cytometer, at low flow rate during 2 min. Using FCM, Xcc cells labeled with FITC-conjugated mAbs (18G12, 2F4, and 20H6) were detected and quantified rapidly at low numbers, i.e., 10(3) colony-forming units per milliliter in pure and in mixed cultures with Psf. The presence of the nonpathogenic Xc in the seed extracts did not interfere with the FCM results. Xcc cells were distinguished from the cells of other organisms and from small particles present in the seed extract based on the high-intensity fluorescence of the labeled cells. The application of FCM in combination with FITC-conjugated mAbs appears to be a promising technique for the detection and quantification of Xcc cells in seed extracts of crucifers. Copyright 2002 Wiley-Liss, Inc.

  15. Fine mapping of the epistatic suppressor gene (esp) of a recessive genic male sterility in rapeseed (Brassica napus L.).

    Science.gov (United States)

    Xu, Zhenghua; Xie, Yanzhou; Hong, Dengfeng; Liu, Pingwu; Yang, Guangsheng

    2009-09-01

    9012AB, a recessive genic male sterility (RGMS) line derived from spontaneous mutation in Brassica napus, has been playing an important role in rapeseed hybrid production in China. The male sterility of 9012AB is controlled by two recessive genes (ms3 and ms4) interacting with one recessive epistatic suppressor gene (esp). The objective of this study was to develop PCR-based markers tightly linked to the esp gene and construct a high-resolution map surrounding the esp gene. From the survey of 512 AFLP primer combinations, 3 tightly linked AFLP markers were obtained and successfully converted to codominant or dominant SCAR markers. Furthermore, a codominant SSR marker (Ra2G08) associated with the esp gene was identified through genetic map integration. For fine mapping of the esp gene, these PCR-based markers were analyzed in a large BC1 population of 2545 plants. The esp gene was then genetically restricted to a region of 1.03 cM, 0.35 cM from SSR marker Ra2G08 and 0.68 cM from SCAR marker WSC6. The SCAR marker WSC5 co-segregated with the target gene. These results lay a solid foundation for map-based cloning of esp and will facilitate the selection of RGMS lines and their temporary maintainers.

  16. Rapeseed research and production in China

    OpenAIRE

    Hu, Qiong; Hua, Wei; Yin, Yan; Zhang, Xuekun; Liu, Lijiang; Shi, Jiaqin; Zhao, Yongguo; Qin, Lu; Chen, Chang; Wang, Hanzhong

    2017-01-01

    Rapeseed (Brassica napus L.) is the largest oilseed crop in China and accounts for about 20% of world production. For the last 10 years, the production, planting area, and yield of rapeseed have been stable, with improvement of seed quality and especially seed oil content. China is among the leading countries in rapeseed genomic research internationally, having jointly with other countries accomplished the whole genome sequencing of rapeseed and its two parental species, Brassica oleracea and...

  17. Rhizosphere competent Mesorhizobiumloti MP6 induces root hair curling, inhibits Sclerotinia sclerotiorum and enhances growth of Indian mustard (Brassica campestris Mesorhizobium loti MP6 rizosférico competente induz encurvamento do pelo daraiz, inibe Sclerotinia sclerotiorum e estimula o crescimento de mostarda indiana (Brassica campestris

    Directory of Open Access Journals (Sweden)

    Shikha Chandra

    2007-03-01

    Full Text Available The bacterial strain Mesorhizobium loti MP6, isolated from root nodules of Mimosa pudica induced growth and yield of Brassica campestris. The isolate MP6 secreted hydroxamate type siderophore in Chrom-Azurol Siderophore (CAS agar medium. Production of hydrocyanic acid (HCN, indole acetic acid (IAA and phosphate solubilizing ability was also recorded under normal growth conditions. Root hair curling was observed through simple glass-slide technique. In vitro study showed a significant increase in population of M. loti MP6 in rhizosphere due to root exudates of B. campestris. In dual culture technique the strain showed a strong antagonistic effect against Sclerotinia sclerotiorum, a white rot pathogen of Brassica campestris. The growth of S. sclerotiorum was inhibited by 75% after prolonged incubation. Efficient root colonization of mustard seedlings was confirmed by using a streptomycin-resistant marker M. loti MP6strep+. The M. loti MP6 coated seeds proved enhanced seed germination, early vegetative growth and grain yield as compared to control. Also, a drastic decline (99% in the incidence of white rot was observed due to application of M. loti MP6.A cepa bacteriana Mesorhizobium loti MP6 isolada de nódulos de raiz de Mimosa pudica induziu o crescimento e o rendimento de Brassica campestris. A cepa MP6 secretou sideróforo do tipo hidroxamato em meio sólido Chrom-Azurol Siderophore (CAS. Em condições normais de crescimento, a cepa foi também capaz de produzir de ácido cianídrico (HCN e acido indolacético (AIA e solubilizar fosfato. O encurvamento do pelo da raiz foi observado usando a simples técnica de lâmina e lamínula. Estudos in vitro mostraram um aumento significativo na população de M. loti MP6 na rizosfera devido aos exsudatos de B. campestris. Empregando-se técnica de co-cultura, a cepa mostrou um grande efeito antagônico contra o fungo Sclerotinia sclerotiorum, o patógeno da podridão branca de Brassica campestris. Ap

  18. Strigolactones Improve Plant Growth, Photosynthesis, and Alleviate Oxidative Stress under Salinity in Rapeseed (Brassica napus L. by Regulating Gene Expression

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    Ni Ma

    2017-09-01

    Full Text Available Rapeseed (Brassica napus L. is a very important edible oil crop in the world, and the production is inhibited by abiotic stresses, such as salinity. Plant hormones can alleviate the stress by regulating the physiological processes and gene expression. To study the plant responses to salinity in combination with GR24, a synthesized strigolactone, the oilseed rape variety (Zhongshuang 11 replications were grown in the pots in a controlled growth chamber under three levels of salinity (0, 100, and 200 mM NaCl and 0.18 μM GR24 treatments at the seedling stage for 7 days. The results showed that salinity depressed the shoots and roots growth, whereas GR24 improved the growth under salt stress. Leaf chlorophyll contents and gas exchange parameters (net photosynthetic rates, stomatal conductance, intercellular CO2 concentration, and transpiration rate were also reduced significantly with increasing salinity, and these effects could be partially reversed by GR24 application. Additionally, GR24 treatment significantly increased and decreased the photosystem II quantum yield and non-photochemical quenching, respectively, under salinity stress conditions. The activities of peroxidase and superoxide dismutase increased, and lipid peroxidation measured by the level of malondialdehyde reduced due to GR24 application. The transcriptome analysis of root and shoot was conducted. Three hundred and forty-two common differentially expressed genes (DEGs after GR24 treatment and 166 special DEGs after GR24 treatment under salinity stress were identified in root and shoot. The DEGs in root were significantly more than that in shoot. Quantitative PCR validated that the stress alleviation was mainly related to the gene expression of tryptophan metabolism, plant hormone signal transduction, and photosynthesis.

  19. Intraspecific variability of floral nectar volume and composition in rapeseed (Brassica napus L. var. oleifera

    Directory of Open Access Journals (Sweden)

    Michele eBertazzini

    2016-03-01

    Full Text Available Numerous angiosperms rely on pollinators to ensure efficient flower fertilization, offering a reward consisting of nourishing nectars produced by specialized floral cells, known as nectaries. Nectar components are believed to derive from phloem sap that is enzymatically processed and transformed within nectaries. An increasing body of evidence suggests that nectar composition, mainly amino acids, may influence pollinator attraction and fidelity. This notwithstanding, little is known about the range of natural variability in nectar content for crop species. Sugar and amino acid composition of nectar harvested from field-grown plants at the 63 to 65 phenological stage was determined for a set of 44 winter genotypes of rapeseed, a bee-pollinated crop. Significant differences were found for solute concentrations, and an even higher variability was evident for nectar volumes, resulting in striking differences when results were expressed on a single flower basis. The comparison of nectar and phloem sap from a subset of 8 varieties pointed out qualitative and quantitative diversities with respect to both sugars and amino acids. Notably, amino acid concentration in phloem sap was up to one hundred times higher than in nectar. Phloem sap showed a much more uniform composition, suggesting that nectar variability depends mainly on nectary metabolism. A better understanding of the basis of nectar production would allow an improvement of seed set efficiency, as well as hive management and honey production.

  20. Studies on the cost-effective management of Alternaria blight of rapeseed-mustard (Brassica spp.

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    M.M. Khan

    2007-08-01

    Full Text Available Three systemic fungicides: Topsin-M (Thiophanate methyl, 70%WP, Ridomil MZ (Mancozeb, 64% + Metalaxyl, 8%WP, and Bavistin (Carbendazim, 50%WP alone and in combination with four non-systemic fungicides Captaf (Captan, 50%WP, Indofil M-45 (Mancozeb, 75%WP, Indofil Z-78 (Zineb, 75%WP, and Thiram (Thiram, 75%WP were evaluated both in vitro and in vivo for their effectiveness to manage Alternaria blight of rapeseedmustard caused by Alternaria brassicae. A pure culture of the pathogenic fungus was applied in the field at 2 g colonized sorghum seeds kg-1 soil. All the fungicides were evaluated for their efficacy at various concentrations, 50, 100, 150, 200 and 500 ppm, and were sprayed in the field at 0.2% a.i. l-1. All fungicides significantly reduced the severity of the disease but Ridomil MZ was most effective. Topsin-M at a concentration of 500 ppm was the most effective in reducing radial growth of the pathogenic fungi (74.2%. Ridomil MZ reduced disease severity by 32% and was followed in effectiveness by the combination Bavistin+Captaf (26.5%. Maximum yield was obtained in plots sprayed with Bavistin+Captaf (1198 kg ha-1 followed by Bavistin+Indofil Z-78 (1172 kg ha-1. It was worth noting that the highest net profit as well as the highest cost-benefit ratio was obtained with Bavistin+Indofil Z-78 (1:3.2, followed by Bavistin+Captaf (1:1.3.

  1. Genome-Wide Association Study Reveals Candidate Genes for Control of Plant Height, Branch Initiation Height and Branch Number in Rapeseed (Brassica napus L.).

    Science.gov (United States)

    Zheng, Ming; Peng, Cheng; Liu, Hongfang; Tang, Min; Yang, Hongli; Li, Xiaokang; Liu, Jinglin; Sun, Xingchao; Wang, Xinfa; Xu, Junfeng; Hua, Wei; Wang, Hanzhong

    2017-01-01

    Plant architecture is crucial for rapeseed yield and is determined by plant height (PH), branch initiation height (BIH), branch number (BN) and leaf and inflorescence morphology. In this study, we measured three major factors (PH, BIH, and BN) in a panel of 333 rapeseed accessions across 4 years. A genome-wide association study (GWAS) was performed via Q + K model and the panel was genotyped using the 60 k Brassica Infinium SNP array. We identified seven loci for PH, four for BIH, and five for BN. Subsequently, by determining linkage disequilibrium (LD) decay associated with 38 significant SNPs, we gained 31, 15, and 17 candidate genes for these traits, respectively. We also showed that PH is significantly correlated with BIH, while no other correlation was revealed. Notably, a GA signaling gene (BnRGA) and a flowering gene (BnFT) located on chromosome A02 were identified as the most likely candidate genes associated with PH regulation. Furthermore, a meristem initiation gene (BnLOF2) and a NAC domain transcriptional factor (BnCUC3) that may be associated with BN were identified on the chromosome A07. This study reveals novel insight into the genetic control of plant architecture and may facilitate marker-based breeding for rapeseed.

  2. Genome-Wide Association Study Reveals Candidate Genes for Control of Plant Height, Branch Initiation Height and Branch Number in Rapeseed (Brassica napus L.

    Directory of Open Access Journals (Sweden)

    Ming Zheng

    2017-07-01

    Full Text Available Plant architecture is crucial for rapeseed yield and is determined by plant height (PH, branch initiation height (BIH, branch number (BN and leaf and inflorescence morphology. In this study, we measured three major factors (PH, BIH, and BN in a panel of 333 rapeseed accessions across 4 years. A genome-wide association study (GWAS was performed via Q + K model and the panel was genotyped using the 60 k Brassica Infinium SNP array. We identified seven loci for PH, four for BIH, and five for BN. Subsequently, by determining linkage disequilibrium (LD decay associated with 38 significant SNPs, we gained 31, 15, and 17 candidate genes for these traits, respectively. We also showed that PH is significantly correlated with BIH, while no other correlation was revealed. Notably, a GA signaling gene (BnRGA and a flowering gene (BnFT located on chromosome A02 were identified as the most likely candidate genes associated with PH regulation. Furthermore, a meristem initiation gene (BnLOF2 and a NAC domain transcriptional factor (BnCUC3 that may be associated with BN were identified on the chromosome A07. This study reveals novel insight into the genetic control of plant architecture and may facilitate marker-based breeding for rapeseed.

  3. Extraction of the Constituent Subgenomes of the Natural Allopolyploid Rapeseed (Brassica napus L.).

    Science.gov (United States)

    Zhu, Bin; Tu, Yuqin; Zeng, Pan; Ge, Xianhong; Li, Zaiyun

    2016-11-01

    As the dynamic nature of progenitor genomes accompanies the speciation by interspecific hybridization, the extraction of the constituent subgenome(s) from a natural allopolyploid species of long history and then restitution of the progenitor(s) provides the unique opportunity to study the genome evolution and interplay. Herein, the A subgenome from the allotetraploid oilseed rape (Brassica napus L., AACC) was extracted through inducing the preferential elimination of C-subgenome chromosomes in intertribal crosses and the progenitor B. rapa was restituted (RBR). Then by crossing and backcrossing RBR with B. napus donor, the C subgenome was in situ dissected by adding each of its nine chromosomes to the extracted A subgenome and establishing the whole set of monosonic alien addition lines (MAALs). RBR from spring-type B. napus genotype "Oro" expressed a phenotype resembling some type of B. rapa never observed before, but showed a winter-type flowering habit. This RBR had weaker growth vigor and suffered more seriously from biotic and abiotic stresses compared with Oro. The phenotypes specific for these MAALs showed the location of the related genes on the particular C-subgenome chromosomes. These MAALs exhibited obviously different frequencies in homeologous pairing and transmission of additional C-subgenome chromosomes, which were associated with the distinct degrees of their relatedness, and even with the possible genetic regulation for meiotic pairing evolved in B. napus Finally, large scaffolds undetermined for sequence assembly of B. napus were anchored to specific C-subgenome chromosomes using MAALs. Copyright © 2016 by the Genetics Society of America.

  4. Effect of plant growth promoting rhizobacteria (PGPR application, nitrogen and zinc sulphate fertilizer on yield and nitrogen uptake in rapeseed (Brassica napus L.

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    N. Jafari

    2016-05-01

    Full Text Available In order to study the effects of simultaneous application of ZnSO4 and biological fertilizer, Azotobacter chroococcum and Azospirillum brasilense, on grain yield and nitrogen uptake efficiency in rapeseed (Brassica napus L., cv. Hyola308, a field experiment was conducted as split plot factorial based on randomized complete block design at research field of Faculty of Agricultural Sciences, University of Guilan, Iran, during growing season of 2007-2008. Results showed that urea fertilizer, ZnSO4 fertilizer and biological fertilizer had significant effects on nitrogen uptake and accumulation. Maximum grain yield (2568 kg.ha-1 were obtained in 150kgN + ZnSO4+ bio treatment. Maximum accumulation of nitrogen in rosette stage (4.9% and nitrogen content of grain (3.6% was obtained in 150 kg N.ha-1N + ZnSO4 + bio. Maximum Nitrogen uptake efficiency and nitrogen use efficiency (0.86 and 29.56 kg.kg-1, respectively were obtained in 50 kgN.ha-1N + ZnSO4 + bio. In regard to significant effects of ZnSO4 and biological fertilizer with lower N rate and high nitrogen uptake efficiency of rapeseed, it seems that the ability of uptake and use of nitrogen fertilizers was greater for seed formation in the presence of ZnSO4 and biological fertilizer in rapeseed, cv. Hyola308. The most important of mechanisms of PGPRs is increase the bioavailability of mineral nutrients with biological nitrogen fixation and soluble phosphorus and potassium that lead to economize nitrogen fertilizer in rapeseed production and minimizing environmental pollution risk.

  5. Production of intergeneric allotetraploid between autotetraploid non-heading Chinese cabbage (Brassica campestris ssp. chinensis Makino and autotetraploid radish (Raphanus sativus L.

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    Sun Cheng-Zhen

    2014-03-01

    Full Text Available Intergeneric hybrids between non-heading Chinese cabbage (Brassica campestris ssp. chinensis Makino; 2n = 4x = 40 and radish (Raphanus sativus L.; 2n = 4x = 36 were obtained through ovary culture and embryo rescue. Some hybrid embryos (0.11 per ovary were produced, but only 4 of them germinated. As most hybrid embryos failed to develop into plantlets directly, plants were regenerated by inducing shoots on the cultured cotyledon and inducing roots on the root induction medium. All hybrid plants were morphologically uniform. They resembled the non-heading Chinese cabbage in the long-lived habit, the plant status, the vernalization requirement and the petiole color, while the petiole shape, leaf venation pattern and flowers were more similar to those of radish. Upon examination of the flowers, these were found to have normal pistil, but rudimentary anthers with non-functional pollen grains. The somatic chromosome number of F1 plants was 38. Analysis of SSR banding patterns provided additional confirmation of hybridity.

  6. Effects of ambient and elevated level of ozone on Brassica campestris L. with special reference to yield and oil quality parameters.

    Science.gov (United States)

    Tripathi, Ruchika; Agrawal, S B

    2012-11-01

    Tropospheric ozone (O(3)) has become a serious threat to growth and yield of important agricultural crops over Asian regions including India. Effect of elevated O(3) (ambient+10ppb) was studied on Brassica campestris L. (cv. Sanjukta and Vardan) in open top chambers under natural field conditions. Eight hourly mean ambient O(3) concentration varied from 26.3ppb to 69.5ppb during the growth period. Plants under O(3) exposure showed reductions in photosynthetic rate, reproductive parameters, yield as well as seed and oil quality. Cultivar Sanjukta showed more reduction in photosynthetic characteristics, reproductive structures and seed and oil quality. However, total yield was more affected in Vardan. Exposure of O(3) increased the degree of unsaturation and level of PUFA, ω-6fatty acid, linolenic acid and erucic acid in oil indicating the deterioration of its quality. The study further confirmed that there is a correspondence between O(3) induced change in photosynthetic processes, reproductive development and yield and did not find any compensatory response in the final yield. Copyright © 2012 Elsevier Inc. All rights reserved.

  7. Fast Plants for Finer Science--An Introduction to the Biology of Rapid-Cycling Brassica Campestris (rapa) L.

    Science.gov (United States)

    Tomkins, Stephen P.; Williams, Paul H.

    1990-01-01

    Rapid-cycling brassicas can be used in the classroom to teach concepts such as plant growth, tropisms, floral reproduction, pollination, embryonic development, and plant genetics. Directions on how to obtain them for classroom use and how they may be grown are included. Practical physiology and genetics exercises are listed. (KR)

  8. Identification and Origin of Xanthomonas campestris pv. campestris Races and Related Pathovars.

    Science.gov (United States)

    Vicente, J G; Conway, J; Roberts, S J; Taylor, J D

    2001-05-01

    ABSTRACT One hundred sixty-four isolates of Xanthomonas campestris pv. campestris and other X. campestris pathovars known to infect cruciferous hosts (X. campestris pvs. aberrans, raphani, armoraciae, and incanae) were inoculated onto a differential series of Brassica spp. to determine both pathogenicity to brassicas and race. Of these, 144 isolates were identified as X. campestris pv. campestris and grouped into six races, with races 1 (62%) and 4 (32%) being predominant. Other races were rare. The remaining 20 isolates from brassicas and other cruciferous hosts were either nonpathogenic or very weakly pathogenic on the differential series and could not be race-typed. Five of these isolates, from the ornamental crucifers wallflower (Cheiranthus cheiri), stock (Matthiola incana) and candytuft (Iberis sp.), showed clear evidence of pathovar-like specificity to the hosts of origin. A gene-for-gene model based on the interaction of four avirulence genes in X. campestris pv. campestris races and four matching resistance genes in the differential hosts is proposed. Knowledge of the race structure and worldwide distribution of races is fundamental to the search for sources of resistance and for the establishment of successful resistance breeding programs.

  9. Identification of novel and conserved miRNAs involved in pollen development in Brassica campestris ssp. chinensis by high-throughput sequencing and degradome analysis

    Science.gov (United States)

    2014-01-01

    Background microRNAs (miRNAs) are endogenous, noncoding, small RNAs that have essential regulatory functions in plant growth, development, and stress response processes. However, limited information is available about their functions in sexual reproduction of flowering plants. Pollen development is an important process in the life cycle of a flowering plant and is a major factor that affects the yield and quality of crop seeds. Results This study aims to identify miRNAs involved in pollen development. Two independent small RNA libraries were constructed from the flower buds of the male sterile line (Bcajh97-01A) and male fertile line (Bcajh97-01B) of Brassica campestris ssp. chinensis. The libraries were subjected to high-throughput sequencing by using the Illumina Solexa system. Eight novel miRNAs on the other arm of known pre-miRNAs, 54 new conserved miRNAs, and 8 novel miRNA members were identified. Twenty-five pairs of novel miRNA/miRNA* were found. Among all the identified miRNAs, 18 differentially expressed miRNAs with over two-fold change between flower buds of male sterile line (Bcajh97-01A) and male fertile line (Bcajh97-01B) were identified. qRT-PCR analysis revealed that most of the differentially expressed miRNAs were preferentially expressed in flower buds of the male fertile line (Bcajh97-01B). Degradome analysis showed that a total of 15 genes were predicted to be the targets of seven miRNAs. Conclusions Our findings provide an overview of potential miRNAs involved in pollen development and interactions between miRNAs and their corresponding targets, which may provide important clues on the function of miRNAs in pollen development. PMID:24559317

  10. Comparative transcript profiling of fertile and sterile flower buds from multiple-allele-inherited male sterility in Chinese cabbage (Brassica campestris L. ssp. pekinensis).

    Science.gov (United States)

    Zhou, Xue; Liu, Zhiyong; Ji, Ruiqin; Feng, Hui

    2017-05-10

    We studied the underlying causes of multiple-allele-inherited male sterility in Chinese cabbage (Brassica campestris L. ssp. pekinensis) by identifying differentially expressed genes (DEGs) related to pollen sterility between fertile and sterile flower buds. In this work, we verified the stages of sterility microscopically and then performed transcriptome analysis of mRNA isolated from fertile and sterile buds using Illumina HiSeq 2000 platform sequencing. Approximately 80% of ~229 million high-quality paired-end reads were uniquely mapped to the reference genome. In sterile buds, 699 genes were significantly up-regulated and 4096 genes were down-regulated. Among the DEGs, 28 pollen cell wall-related genes, 54 transcription factor genes, 45 phytohormone-related genes, 20 anther and pollen-related genes, 212 specifically expressed transcripts, and 417 DEGs located on linkage group A07 were identified. Six transcription factor genes BrAMS, BrMS1, BrbHLH089, BrbHLH091, BrAtMYB103, and BrANAC025 were identified as putative sterility-related genes. The weak auxin signal that is regulated by BrABP1 may be one of the key factors causing pollen sterility observed here. Moreover, several significantly enriched GO terms such as "cell wall organization or biogenesis" (GO:0071554), "intrinsic to membrane" (GO:0031224), "integral to membrane" (GO:0016021), "hydrolase activity, acting on ester bonds" (GO:0016788), and one significantly enriched pathway "starch and sucrose metabolism" (ath00500) were identified in this work. qRT-PCR, PCR, and in situ hybridization experiments validated our RNA-seq transcriptome analysis as accurate and reliable. This study will lay the foundation for elucidating the molecular mechanism(s) that underly sterility and provide valuable information for studying multiple-allele-inherited male sterility in the Chinese cabbage line 'AB01'.

  11. The use of environmental metabolomics to determine glyphosate level of exposure in rapeseed (Brassica napus L.) seedlings

    Energy Technology Data Exchange (ETDEWEB)

    Petersen, Iben Lykke; Tomasi, Giorgio; Sorensen, Hilmer; Boll, Esther S.; Hansen, Hans Christian Bruun [Department of Basic Sciences and Environment, Faculty of Life Sciences, University of Copenhagen, Thorvaldsensvej 40, DK-1871 Frederiksberg C (Denmark); Christensen, Jan H., E-mail: jch@life.ku.dk [Department of Basic Sciences and Environment, Faculty of Life Sciences, University of Copenhagen, Thorvaldsensvej 40, DK-1871 Frederiksberg C (Denmark)

    2011-10-15

    Metabolic profiling in plants can be used to differentiate between treatments and to search for biomarkers for exposure. A methodology for processing Ultra-High-Performance Liquid Chromatography-Diode-Array-Detection data is devised. This methodology includes a scheme for selecting informative wavelengths, baseline removal, retention time alignment, selection of relevant retention times, and principal component analysis (PCA). Plant crude extracts from rapeseed seedling exposed to sublethal concentrations of glyphosate are used as a study case. Through this approach, plants exposed to concentrations down to 5 {mu}M could be distinguished from the controls. The compounds responsible for this differentiation were partially identified and were different from those specific for high exposure samples, which suggests that two different responses to glyphosate are elicited in rapeseed depending on the level of exposure. The PCA loadings indicate that a combination of other metabolites could be more sensitive than the response of shikimate to detect glyphosate exposure. - Highlights: > A method for processing UHPLC-DAD data for plant metabolic profiling is devised. > The metabolic profiling approach is more sensitive to glyphosate exposure than shikimate. > Plants exposed to concentrations down to 5 {mu}M can be distinguished from the controls. > Two different responses to glyphosate may be elicited in rapeseed depending on the level of exposure. - A novel untargeted environmental metabololomic approach is used to detect low-level glyphosate exposure of rapeseed seedlings.

  12. BcMF26a and BcMF26b Are Duplicated Polygalacturonase Genes with Divergent Expression Patterns and Functions in Pollen Development and Pollen Tube Formation in Brassica campestris.

    Directory of Open Access Journals (Sweden)

    Meiling Lyu

    Full Text Available Polygalacturonase (PG is one of the cell wall hydrolytic enzymes involving in pectin degradation. A comparison of two highly conserved duplicated PG genes, namely, Brassica campestris Male Fertility 26a (BcMF26a and BcMF26b, revealed the different features of their expression patterns and functions. We found that these two genes were orthologous genes of At4g33440, and they originated from a chromosomal segmental duplication. Although structurally similar, their regulatory and intron sequences largely diverged. QRT-PCR analysis showed that the expression level of BcMF26b was higher than that of BcMF26a in almost all the tested organs and tissues in Brassica campestris. Promoter activity analysis showed that, at reproductive development stages, BcMF26b promoter was active in tapetum, pollen grains, and pistils, whereas BcMF26a promoter was only active in pistils. In the subcellular localization experiment, BcMF26a and BcMF26b proteins could be localized to the cell wall. When the two genes were co-inhibited, pollen intine was formed abnormally and pollen tubes could not grow or stretch. Moreover, the knockout mutants of At4g33440 delayed the growth of pollen tubes. Therefore, BcMF26a/b can participate in the construction of pollen wall by modulating intine information and BcMF26b may play a major role in co-inhibiting transformed plants.

  13. Potencial alelopático de Brassica campestris subsp. rapa y Lolium temulentum sobre la germinación de semillas de tomate

    Directory of Open Access Journals (Sweden)

    Carolina Zamorano

    2005-07-01

    Full Text Available Con el objeto de evaluar el potencial alelopático de los extractos de hojas de nabo (Brassica campestris subsp. rapa y raigrás (Lolium temulentum, utilizando dos solventes (agua y metanol, se desarrollaron bioensayos con semillas pregerminadas de tomate en el laboratorio de Malherbología de la Universidad Nacional de Colombia, sede Bogotá. Los bioensayos tuvieron un diseño de bloques al azar con tres repeticiones y se replicaron tres veces. Las concentraciones de los extractos utilizados fueron 10, 25, 50 y 100 g. L-1. Como variables se midieron: el porcentaje de germinación, la longitud del brote aéreo y raíz y, adicionalmente, se calculó el porcentaje de elongación con respecto al control. No hubo efectos de los extractos sobre la germinación de semillas de tomate. Los extractos acuosos de nabo tuvieron efectos estimulantes sobre la elongación de la raíz del tomate, con concentraciones de 10 g. L-1, y detrimentales en el rango de 25 a 100 g. L-1; la concentración que redujo el crecimiento en 50% (DC50 estuvo entre 44 y 49 g. L-1, para la longitud de raíz y de brote aéreo, respectivamente. Los extractos metanólicos de nabo disminuyeron la elongación de la raíz de tomate a medida que aumentaba la concentración del extracto. El efecto de los extractos de raigrás sobre la elongación de la raíz del tomate fue similar con los dos solventes, disminuyéndola 40% en promedio con las concentraciones de 10 a 100 g. L-1; la DC50 se calculó para el porcentaje de elongación de la raíz con extracto acuoso y fue 10 g. L-1.

  14. Potencial alelopático de Brassica campestris subsp. rapa y Lolium temulentum sobre tres especies de malezas de la Sabana de Bogotá

    Directory of Open Access Journals (Sweden)

    Carolina Zamorano

    2005-07-01

    Full Text Available Se realizaron bioensayos con el objeto de evaluar el potencial alelopático de los extractos de hojas y residuos de nabo silvestre (Brassica campestris subsp. rapa [L.] Hook. f. y raigrás (Lolium temulentum L. sobre tres especies de malezas de la Sabana de Bogotá: cenizo (Chenopodium petiolare Kunth, malva blanca (Fuertesimalva limensis [L.] Fryxell y bledo (Amaranthus hybridus L.. Los bioensayos en el laboratorio se desarrollaron con la técnica de plántulas en solución nutritiva, bajo un diseño completamente al azar con tres repeticiones y tres réplicas en el tiempo, y en invernadero, donde se usó mezcla de arena y turba (3:2 como sustrato y semillas pregerminadas. Los resultados obtenidos en laboratorio mostraron diferencias en los síntomas observados entre las diferentes especies, mientras que la variable peso fresco fue la que mejor describió el efecto de las concentración para los extractos de nabo, con una concentración que reduce la variable de respuesta en 50% (DC50 de 5,53 g· L-1 para bledo, 2,58 g· L-1 para cenizo y 7,72 g· L-1 para malva blanca. En el caso de raigrás, el peso fresco permitió el ajuste de una curva concentración-respuesta, con el fin de calcular la DC50. La respuesta entre las especies de malezas fue diferente respecto a la actividad de los extractos y de los residuos vegetales en suelo. En el caso del bledo, no se registraron diferencias entre los residuos en suelo y los extractos de nabo, mientras que con cenizo y malva blanca no hubo emergencia de plántulas bajo la condición de residuos en suelo de nabo. El peso fresco de plántulas de tomate disminuyó en cerca del 25% al crecer en residuos de nabo (6 ó 12 t· ha-1 de materia fresca y en cerca del 60% bajo residuos de raigrás (6 t· ha-1 de materia fresca.

  15. Genome-Wide SNP Markers Based on SLAF-Seq Uncover Breeding Traces in Rapeseed (Brassica napus L.

    Directory of Open Access Journals (Sweden)

    Donghui Fu

    2017-04-01

    Full Text Available Single Nucleotide Polymorphisms (SNPs are the most abundant and richest form of genomic polymorphism, and hence make highly favorable markers for genetic map construction and genome-wide association studies. In this study, a total of 300 rapeseed accessions (278 representative of Chinese germplasm, plus 22 outgroup accessions of different origins and ecotypes were collected and sequenced using Specific-Locus Amplified Fragment Sequencing (SLAF-seq technology, obtaining 660.25M reads with an average sequencing depth of 6.27 × and a mean Q30 of 85.96%. Based on the 238,711 polymorphic SLAF tags a total of 1,197,282 SNPs were discovered, and a subset of 201,817 SNPs with minor allele frequency >0.05 and integrity >0.8 were selected. Of these, 30,877 were designated SNP “hotspots,” and 41 SNP-rich genomic regions could be delineated, with 100 genes associated with plant resistance, vernalization response, and signal transduction detected in these regions. Subsequent analysis of genetic diversity, linkage disequilibrium (LD, and population structure in the 300 accessions was carried out based on the 201,817 SNPs. Nine subpopulations were observed based on the population structure analysis. Hierarchical clustering and principal component analysis divided the 300 varieties roughly in accordance with their ecotype origins. However, spring-type varieties were intermingled with semi-winter type varieties, indicating frequent hybridization between spring and semi-winter ecotypes in China. In addition, LD decay across the whole genome averaged 299 kb when r2 = 0.1, but the LD decay in the A genome (43 kb was much shorter than in the C genome (1,455 kb, supporting the targeted introgression of the A genome from progenitor species B. rapa into Chinese rapeseed. This study also lays the foundation for genetic analysis of important agronomic traits using this rapeseed population.

  16. Genome-Wide SNP Markers Based on SLAF-Seq Uncover Breeding Traces in Rapeseed (Brassica napus L.).

    Science.gov (United States)

    Zhou, Qinghong; Zhou, Can; Zheng, Wei; Mason, Annaliese S; Fan, Shuying; Wu, Caijun; Fu, Donghui; Huang, Yingjin

    2017-01-01

    Single Nucleotide Polymorphisms (SNPs) are the most abundant and richest form of genomic polymorphism, and hence make highly favorable markers for genetic map construction and genome-wide association studies. In this study, a total of 300 rapeseed accessions (278 representative of Chinese germplasm, plus 22 outgroup accessions of different origins and ecotypes) were collected and sequenced using Specific-Locus Amplified Fragment Sequencing (SLAF-seq) technology, obtaining 660.25M reads with an average sequencing depth of 6.27 × and a mean Q30 of 85.96%. Based on the 238,711 polymorphic SLAF tags a total of 1,197,282 SNPs were discovered, and a subset of 201,817 SNPs with minor allele frequency >0.05 and integrity >0.8 were selected. Of these, 30,877 were designated SNP "hotspots," and 41 SNP-rich genomic regions could be delineated, with 100 genes associated with plant resistance, vernalization response, and signal transduction detected in these regions. Subsequent analysis of genetic diversity, linkage disequilibrium (LD), and population structure in the 300 accessions was carried out based on the 201,817 SNPs. Nine subpopulations were observed based on the population structure analysis. Hierarchical clustering and principal component analysis divided the 300 varieties roughly in accordance with their ecotype origins. However, spring-type varieties were intermingled with semi-winter type varieties, indicating frequent hybridization between spring and semi-winter ecotypes in China. In addition, LD decay across the whole genome averaged 299 kb when r(2) = 0.1, but the LD decay in the A genome (43 kb) was much shorter than in the C genome (1,455 kb), supporting the targeted introgression of the A genome from progenitor species B. rapa into Chinese rapeseed. This study also lays the foundation for genetic analysis of important agronomic traits using this rapeseed population.

  17. An estimation of the global emission of methyl bromide from rapeseed ( Brassica napus) from 1961 to 2003

    Science.gov (United States)

    Mead, M. Iqbal; White, Iain R.; Nickless, Graham; Wang, Kuo-Ying; Shallcross, Dudley E.

    Gan et al. [Gan, J., Yates, S.R., Ohr, H.D., Sims, J.J., 1998. Production of methyl bromide by terrestrial higher plants. Geophysical Research Letters 25 (19), 3595-3598] have reported that plants of the family Brassicaceae take up bromide from soils and subsequently release methyl bromide (CH 3Br) to the atmosphere deriving a significant emission from this source of about 7 Gg(10 9 g) yr -1. In this study, we determine a yearly global emission rate for CH 3Br from one such species, rapeseed, from 1961 to 2003 using data on crop harvest index and growth rate in conjunction with global production data. This study suggests that CH 3Br emissions from rapeseed have increased 10-fold from 1961 to 2003 and by a factor of 3-4 since 1980. It also suggests that the geographical distribution of emissions has also changed substantially in the last 40 yr. The annual emission of CH 3Br from mustard and cabbage is also estimated; whilst relative levels emitted from these species are less significant, as these crops are continually exploited for new applications CH 3Br emissions are set to increase.

  18. Different irrigation and nitrogen fertilizer treatments on some agro-physiologic traits in rapeseed (Brassica napus L.).

    Science.gov (United States)

    Daneshvar, Mashallah; Sarvestani, Zeinalaabdine Tahmasebi; Sanavy, Seyed Ali Mohammad Modarres

    2008-06-15

    In order to investigate the effect of irrigation and nitrogen fertilizer on agronomical and physiological traits of two winter rapeseed varieties, an experiment was established in a randomized complete block design as split-plot factorial arrangement with four replications in 2005-2006 at Agricultural Research Station of Khorramabad, Iran. Irrigation as main-plot factor consisted of four levels (I60, I90, I120 and I150). Sub-plot factors included nitrogen in four levels (N0, N70, N140, and N210 kg N ha(-1)) and two varieties (Zarfam and SLM046). Thousand-seed weight (TSW) in all irrigation and nitrogen levels was lower in the 2006 than that of the 2005. Seed oil percentage (SOP) was decreased with increasing water use only in second year. As nitrogen rate increased, SOP decreased and seed oil yield (SOY) increased in the 2006 significantly (p < 0.05). With increasing water supply, SOY increased in first year. Zarfam variety had a higher TSW and SOP in both years. According to combined analysis results, seed and oil yield were not significantly affected by irrigation treatments and rapeseed varieties. Seed yield had not significant difference between 70 to 210 kg N ha(-1) treatments. Both Water Use Efficiency (WUE) and dry matter remobilization efficiency (DMRE) were increased by decreasing water supply in I90 to I150 treatments. But N0 and N210 resulted in the lowest WUE and DMRE, respectively. Considering all traits, the first year of experiment was better than second year. The irrigation x variety interaction had a significant (p < 0.01) effect on seed yield and WUE. Generally, I150N70V1 combination is recommended in the region of the study due to high performance in production of seed and oil yield.

  19. IDENTIFIKASI ANTAGONIS DARI Xanthomonas campestris YANG DIISOLASI DARI RHIZOSPHERE PERKEBUNAN BROKOLI (Brassica oleracea var. italica DI DESA KEMBANG MERTA, KABUPATEN TABANAN, BALI

    Directory of Open Access Journals (Sweden)

    Nadya Treesna Wulansari

    2015-08-01

    Full Text Available The main objectives of this research were to isolate and identify antagonists of Xanthomonas campestris from rhizosphere zone of broccoli plants. Soil samples were collected from broccoli farm located at Kembang Merta village, Tabanan, Bali. Isolation and identification of the antagonists were conducted at the Laboratory of Microbiology, Udayana University. Two fungal (Trichoderma harzianum and  Trichoderma viride and two bacterial (Bacillus sp. and Pseudomonas sp. antagonists potentially to be developed as biocontrol agents of Xanthomonas campestris were successfully identified in this research.

  20. Whole-Genome Identification and Expression Pattern of the Vicinal Oxygen Chelate Family in Rapeseed (Brassica napus L.)

    Science.gov (United States)

    Liang, Yu; Wan, Neng; Cheng, Zao; Mo, Yufeng; Liu, Baolin; Liu, Hui; Raboanatahiry, Nadia; Yin, Yongtai; Li, Maoteng

    2017-01-01

    Vicinal oxygen chelate proteins (VOC) are members of the metalloenzyme superfamily, which plays roles in many biological reactions. Some members of the VOC superfamily have been systematically characterized but not in Brassica napus. In this study, 38 VOC genes were identified based on their conserved domains. The present results revealed that most of the BnaVOC genes have few introns, and all contained the typical VOC structure of βαβββ modules. The BnaVOC genes are distributed unevenly across 15 chromosomes in B. napus and occur as gene clusters on chromosomes C5 and A6. The synteny and phylogenetic analyses revealed that the VOC gene family is a consequence of mesopolyploidy events that occurred in Brassica evolution, and whole-genome duplication and segmental duplication played a major role in the expansion of the BnaVOC gene family. The expression profile analysis indicated that the expression of most BnaVOCs was increased in the leaves and late stage seeds. Further results indicated that seeds of B. napus with a high oil content show higher expression levels under drought stress conditions, suggesting that BnaVOCs not only respond to abiotic stress but may also affect lipid metabolism in drought stress. This present study provides a comprehensive overview of the VOC gene family and provides new insights into their biological function in B. napus evolution. PMID:28536594

  1. Genome-wide association study reveals the genetic architecture of flowering time in rapeseed (Brassica napus L.).

    Science.gov (United States)

    Xu, Liping; Hu, Kaining; Zhang, Zhenqian; Guan, Chunyun; Chen, Song; Hua, Wei; Li, Jiana; Wen, Jing; Yi, Bin; Shen, Jinxiong; Ma, Chaozhi; Tu, Jinxing; Fu, Tingdong

    2016-02-01

    Flowering time adaptation is a major breeding goal in the allopolyploid species Brassica napus. To investigate the genetic architecture of flowering time, a genome-wide association study (GWAS) of flowering time was conducted with a diversity panel comprising 523 B. napus cultivars and inbred lines grown in eight different environments. Genotyping was performed with a Brassica 60K Illumina Infinium SNP array. A total of 41 single-nucleotide polymorphisms (SNPs) distributed on 14 chromosomes were found to be associated with flowering time, and 12 SNPs located in the confidence intervals of quantitative trait loci (QTL) identified in previous researches based on linkage analyses. Twenty-five candidate genes were orthologous to Arabidopsis thaliana flowering genes. To further our understanding of the genetic factors influencing flowering time in different environments, GWAS was performed on two derived traits, environment sensitivity and temperature sensitivity. The most significant SNPs were found near Bn-scaff_16362_1-p380982, just 13 kb away from BnaC09g41990D, which is orthologous to A. thaliana CONSTANS (CO), an important gene in the photoperiod flowering pathway. These results provide new insights into the genetic control of flowering time in B. napus and indicate that GWAS is an effective method by which to reveal natural variations of complex traits in B. napus. © The Author 2015. Published by Oxford University Press on behalf of Kazusa DNA Research Institute.

  2. Brassica napus

    Indian Academy of Sciences (India)

    2011-12-16

    Dec 16, 2011 ... Abstract. Experiments were conducted on rapeseed (Brassica napus L.) using a diallel design with nine parents: Youcai 601, Double 20-. 4, Huashuang 3, Gaoyou 605, Zhongyou 821, Eyouchangjia, Zhong R-888, Tower and Zheshuang 72. The seed developmental process was divided into five stages, ...

  3. Effect of freezing and room temperatures storage for 18 months on quality of raw rapeseed honey (Brassica napus).

    Science.gov (United States)

    Kędzierska-Matysek, Monika; Florek, Mariusz; Wolanciuk, Anna; Skałecki, Piotr

    2016-08-01

    The physicochemical properties, colour characteristics and dynamic viscosity of fresh rapeseed honey (control, CON) and those stored for 18 months at room temperature (RT) or in freezer (FRO) were compared. The significant decrease of pH after storage was found. Honey stored at RT showed an increase of 5-hydroxymethylfurfural (HMF) (+543.0 %) and decrease of diastase activity (-24.4 %), while in FRO samples the decreasing course (-50.5 and -7.3 %, p > 0.05) were found in comparison with CON samples (3.07 and 28.37 mg kg-1). The negative correlation between HMF content and diastase activity was found. The temperature of storage significantly influenced colour parameters, however, RT differentiated colour of honey to a greater extent (ΔE = 20.37) than FRO (ΔE = 8.07). The lightness (L*), hue (h°), whiteness index (WI) and colour intensity (ABS450) of CON honey samples were similar to honey from FRO. The dynamic viscosity was significantly higher in honey stored in FRO in comparison to CON honey and honey stored at RT. However, in comparison with CON honey, higher (almost twice) viscosity for honey stored at RT was observed.

  4. Genetic diversity and pathogenicity differentiation of Sclerotinia sclerotiorum on rapeseed (Brassica napus L.) in Anhui Province, China.

    Science.gov (United States)

    Xu, D F; Li, X L; Pan, Y M; Dai, Y L; Li, P; Chen, F X; Zhang, H J; Guo, M; Gao, Z M

    2014-12-18

    The pathogenicity of 47 isolates of Sclerotinia sclerotiorum from oilseed rape (Brassica napus L.) in Anhui, China, was tested by detached leaf inoculation using the susceptible rape cultivar Wanyou-14. All isolates were pathogenic to the cultivar and could be grouped into 3 categories based on the lesion length on the leaves tested: weak pathogenicity type, intermediate pathogenicity type, and strong pathogenicity type. This suggested that there was differentiation in the pathogenicity among the strains tested of S. sclerotiorum. Additionally, the intraspecific DNA polymorphisms among 47 strains of S. sclerotiorum were investigated by screening 40 pairs of inter-simple sequence repeat (ISSR) primers. Unweighted pair-group method with arithmetic average cluster analysis of these ISSR data distinguished all strains from each other and revealed considerable genetic variability among them. These strains were classified into 7 clusters according to their branching in the dendrogram, and partial correlation was observed between the genetic polymorphisms and the pathogenicity of S. sclerotiorum strains.

  5. Drug: D09374 [KEGG MEDICUS

    Lifescience Database Archive (English)

    Full Text Available D09374 Crude, Drug Rapeseed oil, fully hydrogenated superglycerinated (NF) Brassica... napus [TAX:3708], Brassica campestris [TAX:439823] Brassicaceae (mustard family) Brassica napus, Brassica campestris seed oil hydrogenated, superglycerinated PubChem: 96026054 ...

  6. Survival of pathogens of Brussels sprouts (Brassica oleracea Gemifera group) in crop residues

    NARCIS (Netherlands)

    Köhl, J.; Vlaswinkel, M.E.T.; Groenenboom-de Haas, B.H.; Kastelein, P.; Hoof, van R.A.; Wolf, van der J.M.; Krijger, M.C.

    2011-01-01

    Mycosphaerella brassicicola (ringspot), Alternaria brassicicola and A. brassicae (dark leaf spot) and Xanthomonas campestris pv. campestris (black spot) can infect leaves of Brussels sprouts resulting in yield losses. Infections of outer leaves of sprouts cause severe losses in quality. Crop

  7. TGMS in Rapeseed (Brassica napus Resulted in Aberrant Transcriptional Regulation, Asynchronous Microsporocyte Meiosis, Defective Tapetum, and Fused Sexine

    Directory of Open Access Journals (Sweden)

    Xi-Qiong Liu

    2017-07-01

    Full Text Available The thermo-sensitive genic male sterility (TGMS line SP2S is a spontaneous rapeseed mutation with several traits that are favorable for the production of two-line hybrids. To uncover the key cellular events and genetic regulation associated with TGMS expression, a combined study using cytological observation, transcriptome profiling, and gene expression analysis was conducted for SP2S and its near-isogenic line SP2F grown under warm conditions. Asynchronous microsporocyte meiosis and abnormal tapetal plastids and elaioplasts were demonstrated in the anther of SP2S. The tetrad microspore did not undergo mitosis before the cytoplasm degenerated. Delayed degradation of the tetrad wall, which led to tetrad microspore aggregation, resulted in postponement of sexine (outer layer of pollen exine formation and sexine fusion in the tetrad. The nexine (foot layer of exine was also absent. The delay of tetrad wall degradation and abnormality of the exine structure suggested that the defective tapetum lost important functions. Based on transcriptomic comparisons between young flower buds of SP2S and SP2F plants, a total of 465 differentially expressed transcripts (DETs were identified, including 303 up-regulated DETs and 162 down-regulated DETs in SP2S. Several genes encoding small RNA degrading nuclease 2, small RNA 2′-O-methyltransferase, thioredoxin reductase 2, regulatory subunit A alpha isoform of serine/threonine-protein phosphatase 2A, glycine rich protein 1A, transcription factor bHLH25, leucine-rich repeat receptor kinase At3g14840 like, and fasciclin-like arabinogalactan proteins FLA19 and FLA20 were greatly depressed in SP2S. Interestingly, a POLLENLESS3-LIKE 2 gene encoding the Arabidopsis MS5 homologous protein, which is necessary for microsporocyte meiosis, was down-regulated in SP2S. Other genes that were up-regulated in SP2S encoded glucanase A6, ethylene-responsive transcription factor 1A-like, pollen-specific SF3, stress

  8. Evaluation of Yield Component Traits of Honeybee-Pollinated (Apis mellifera L.Rapeseed Canola (Brassica napus L. Evaluación de Parámetros de Rendimiento del Raps (Brassica napus L. Polinizado por Abejas (Apis mellifera L.

    Directory of Open Access Journals (Sweden)

    Ximena Araneda Durán

    2010-06-01

    Full Text Available Recent introduction of hybrid varieties raises the question if bees (Apis mellifera L. contribute as pollinator agents in developing the full yield potential of rapeseed (Brassica napus L.. In order to evaluate the yield achieved by B. napus cv. Artus pollinated by A. mellifera testing was carried out in the district of Freire, La Araucanía Region, Chile. This consisted in isolating or excluding rapeseed plants from pollinators with exclusion cages. Treatments applied were total exclusion (T1, partial exclusion (T2 and free pollination (T0 with a density of 6.5 hives ha-1, in order to determine the following yield components traits: grains per silique, siliques per plant, 1000 grain weight and yield. The experimental design used was randomized complete blocks with three treatments and three replicates. Results obtained show that the parameter least affected by bee intervention was the grains per silique variable. In contrast, siliques per plant and 1000 grain weight parameters presented significant differences, contributing to a yield greater than 5 t ha-1; which represented a figure 50.34% higher than in the treatment without bees. It may be concluded that the inclusion of bees in crops is fully justified as a production tool.La reciente introducción de variedades híbridas plantea la interrogante de la contribución que pueda tener la presencia de abejas (Apis mellifera L. como agentes polinizadores para desarrollar en pleno el potencial productivo del raps (Brassica napus L.. Con el objetivo de evaluar el rendimiento alcanzado por B. napus cv. Artus polinizado por A. mellifera, se realizó un ensayo en la localidad de Freire, Región de La Araucanía, Chile. Éste consistió en aislar o excluir las plantas de raps de los polinizadores mediante el uso de jaulas excluidoras. Los tratamientos consistieron en la exclusión total (T1, exclusión parcial (T2 y libre polinización (T0 con una densidad de 6,5 colmenas ha-1, con el fin de determinar

  9. Immunofluorescence microscopy and dilution-plating for the detection of Xanthomonas campestris pv. campestris in crucifer seeds : methods to determine seed health and seed infection

    NARCIS (Netherlands)

    Franken, A.A.J.M.

    1992-01-01

    Black rot is one of the most threatening diseases of crucifers. The causal agent of this disease is the bacterium Xanthomonas campestris pv. campestris . The bacterium attacks all cultivated brassicas, radishes and numerous weeds, and is able to survive on

  10. Mapping and Identifying a Candidate Gene (Bnmfs for Female-Male Sterility through Whole-Genome Resequencing and RNA-Seq in Rapeseed (Brassica napus L.

    Directory of Open Access Journals (Sweden)

    Changcai Teng

    2017-12-01

    Full Text Available In oilseed crops, carpel and stamen development play vital roles in pollination and rapeseed yield, but the genetic mechanisms underlying carpel and stamen development remain unclear. Herein, a male- and female-sterile mutant was obtained in offspring of a (Brassica napus cv. Qingyou 14 × (Qingyou 14 × B. rapa landrace Dahuang cross. Subsequently, F2–F9 populations were generated through selfing of the heterozygote plants among the progeny of each generation. The male- and female-sterility exhibited stable inheritance in successive generations and was controlled by a recessive gene. The mutant kept the same chromosome number (2n = 38 as B. napus parent but showed abnormal meiosis for male and female. One candidate gene for the sterility was identified by simple sequence repeat (SSR and insertion deletion length polymorphism (InDel markers in F7–F9 plants, and whole-genome resequencing with F8 pools and RNA sequencing with F9 pools. Whole-genome resequencing found three candidate intervals (35.40–35.68, 35.74–35.75, and 45.34–46.45 Mb on chromosome C3 in B. napus and candidate region for Bnmfs was narrowed to approximately 1.11-Mb (45.34–46.45 M by combining SSR and InDel marker analyses with whole-genome resequencing. From transcriptome profiling in 0–2 mm buds, all of the genes in the candidate interval were detected, and only two genes with significant differences (BnaC03g56670D and BnaC03g56870D were revealed. BnaC03g56870D was a candidate gene that shared homology with the CYP86C4 gene of Arabidopsis thaliana. Quantitative reverse transcription (qRT-PCR analysis showed that Bnmfs primarily functioned in flower buds. Thus, sequencing and expression analyses provided evidence that BnaC03g56870D was the candidate gene for male and female sterility in the B. napus mutant.

  11. Water Capture, and Use Efficiency and Productivity in Sole and Intercropping of Rapeseed (Brassica napus L., Bean (Phaseolus vulgaris L. and Corn (Zea mays L.

    Directory of Open Access Journals (Sweden)

    S Najibnia

    2014-09-01

    Full Text Available In order to evaluate water capture and use efficiency and also productivity in sole and intercropping of three crops Rapeseed, Bean and Corn, an experiment was conducted in Mashhad in the growing season of 2007-2008. In this investigation six treatments including three sole cropping of the three crops (rapeseed sown in 22 September 2007, bean and corn in 29 April 2008 and three intercropping including double cropping (simultaneous sowing of corn and bean in 29 April 2008, two stage-relay intercropping of rapeseed, corn and bean (rapeseed in 22 September 2007, bean and corn in 29 April 2008 and finally three stage-relay intercropping of rapeseed, corn and bean (rapeseed sown in 22 September 2007, bean in 8 April 2008 and corn in 29 April 2008 were arranged in a complete randomized block design with three replications. Results showed that in general, cropping combination affected water capture and use efficiency and also water productivity (p≤0.01. Among intercropping treatments, two stage-relay intercropping showed the highest capture efficiency (0.43, three stage-relay intercropping had the highest water use and productivity in terms of biological yields (1.82 and 0.73 g/m2/mm, respectively and double cropping showed the highest water use efficiency and productivity in terms of seed yield (0.43 and 0.17 g/m2/mm, respectively. Among sole cropping treatments, rapeseed showed the highest capture efficiency (0.26, use efficiency and productivity in terms of biological yields (6.82 and 1.75 g/m2/mm, respectively and corn showed the highest use efficiency and productivity in terms of seed yield (1.5 and 0.35 g/m2/mm, respectively. In general, two stage-relay intercropping for capture efficiency, sole cropping of rapeseed for use efficiency and productivity in terms of biological yield, and sole cropping of corn for use efficiency and productivity in terms of seed yield were superior than others. However, it seems that such combinations of crops for

  12. Rapeseed research and production in China

    Directory of Open Access Journals (Sweden)

    Qiong Hu

    2017-04-01

    Full Text Available Rapeseed (Brassica napus L. is the largest oilseed crop in China and accounts for about 20% of world production. For the last 10 years, the production, planting area, and yield of rapeseed have been stable, with improvement of seed quality and especially seed oil content. China is among the leading countries in rapeseed genomic research internationally, having jointly with other countries accomplished the whole genome sequencing of rapeseed and its two parental species, Brassica oleracea and Brassica rapa. Progress on functional genomics including the identification of QTL governing important agronomic traits such as yield, seed oil content, fertility regulation, disease and insect resistance, abiotic stress, nutrition use efficiency, and pod shattering resistance has been achieved. As a consequence, molecular markers have been developed and used in breeding programs. During 2005–2014, 215 rapeseed varieties were registered nationally, including 210 winter- and 5 spring-type varieties. Mechanization across the whole process of rapeseed production was investigated and operating instructions for all relevant techniques were published. Modern techniques for rapeseed field management such as high-density planting, controlled-release fertilizer, and biocontrol of disease and pests combined with precision tools such as drones have been developed and are being adopted in China. With the application of advanced breeding and production technologies, in the near future, the oil yield and quality of rapeseed varieties will be greatly increased, and more varieties with desirable traits, especially early maturation, high yield, high resistance to biotic and abiotic stress, and suitability for mechanized harvesting will be developed. Application of modern technologies on the mechanized management of rapeseed will greatly increase grower profit.

  13. Genetic dissection of leaf development in Brassica rapa using a ‘geneticalgenomics’ approach

    NARCIS (Netherlands)

    Xiao, D.; Wang, H.; Basnet, R.K.; Jianjun Zhao, Jianjun; Lin, K.; Hou, X.; Bonnema, A.B.

    2014-01-01

    The paleohexaploid crop Brassica rapa harbors an enormous reservoir of morphological variation, encompassing leafy vegetables, vegetable and fodder turnips (Brassica rapa, ssp. campestris), and oil crops, with different crops having very different leaf morphologies. In the triplicated B. rapa

  14. Fast and nondestructive determination of protein content in rapeseeds (Brassica napus L.) using Fourier transform infrared photoacoustic spectroscopy (FTIR-PAS).

    Science.gov (United States)

    Lu, Yuzhen; Du, Changwen; Yu, Changbing; Zhou, Jianmin

    2014-08-01

    Fast and non-destructive determination of rapeseed protein content carries significant implications in rapeseed production. This study presented the first attempt of using Fourier transform mid-infrared photoacoustic spectroscopy (FTIR-PAS) to quantify protein content of rapeseed. The full-spectrum model was first built using partial least squares (PLS). Interval selection methods including interval partial least squares (iPLS), synergy interval partial least squares (siPLS), backward elimination interval partial least squares (biPLS) and dynamic backward elimination interval partial least squares (dyn-biPLS) were then employed to select the relevant band or band combination for PLS modeling. The full-spectrum PLS model achieved an ratio of prediction to deviation (RPD) of 2.047. In comparison, all interval selection methods produced better results than full-spectrum modeling. siPLS achieved the best predictive accuracy with an RPD of 3.215 when the spectrum was sectioned into 25 intervals, and two intervals (1198-1335 and 1614-1753 cm(-1) ) were selected. iPLS excelled biPLS and dyn-biPLS, and dyn-biPLS performed slightly better than biPLS. FTIR-PAS was verified as a promising analytical tool to quantify rapeseed protein content. Interval selection could extract the relevant individual band or synergy band associated with the sample constituent of interest, and then improve the prediction accuracy of the full-spectrum model. © 2013 Society of Chemical Industry.

  15. Tobacco Rotated with Rapeseed for Soil-Borne Phytophthora Pathogen Biocontrol: Mediated by Rapeseed Root Exudates

    Directory of Open Access Journals (Sweden)

    Yuting Fang

    2016-06-01

    Full Text Available Black shank, caused by Phytophthora parasitica var. nicotianae, is a widespread and destructive disease of tobacco. Crop rotation is essential in controlling black shank. Here, we confirmed that rotating black shank-infested fields with rapeseed (Brassica napus suppressed the incidence this disease. Further study demonstrated that rapeseed roots have a strong ability to attract zoospores and subsequently stop the swimming of zoospores into cystospores. Then, rapeseed roots secrete a series of antimicrobial compounds, including 2-butenoic acid, benzothiazole, 2-(methylthiobenzothiazole, 1-(4-ethylphenyl-ethanone, and 4-methoxyindole, to inhibit the cystospore germination and mycelial growth of P. parasitica var. nicotianae. Thus, rapeseed rotated with tobacco suppresses tobacco black shank disease through the chemical weapons secreted by rapeseed roots.

  16. Effector-triggered innate immunity contributes Arabidopsis resistance to Xanthomonas campestris.

    Science.gov (United States)

    Rong, Wei; Feng, Feng; Zhou, Jianmin; He, Chaozu

    2010-11-01

    Xanthomonas campestris pv. campestris, the causal agent of black rot disease, depends on its type III secretion system (TTSS) to infect cruciferous plants, including Brassica oleracea, B. napus and Arabidopsis. Previous studies on the Arabidopsis-Pseudomonas syringae model pathosystem have indicated that a major function of TTSS from virulent bacteria is to suppress host defences triggered by pathogen-associated molecular patterns. Similar analyses have not been made for the Arabidopsis-X. campestris pv. campestris pathosystem. In this study, we report that X. campestris pv. campestris strain 8004, which is modestly pathogenic on Arabidopsis, induces strong defence responses in Arabidopsis in a TTSS-dependent manner. Furthermore, the induction of defence responses and disease resistance to X. campestris pv. campestris strain 8004 requires NDR1 (NON-RACE-SPECIFIC DISEASE RESISTANCE1), RAR1 (required for Mla12 resistance) and SGT1b (suppressor of G2 allele of skp1), suggesting that effector-triggered immunity plays a large role in resistance to this strain. Consistent with this notion, AvrXccC, an X. campestris pv. campestris TTSS effector protein, induces PR1 expression and confers resistance in Arabidopsis in a RAR1- and SGT1b-dependent manner. In rar1 and sgt1b mutants, AvrXccC acts as a virulence factor, presumably because of impaired resistance gene function. © 2010 The Authors. Molecular Plant Pathology © 2010 BSPP and Blackwell Publishing Ltd.

  17. Identification and genetic characterization by high-throughput SNP analysis of intervarietal substitution lines of rapeseed (Brassica napus L.) with enhanced embryogenic potential.

    Science.gov (United States)

    Ecke, Wolfgang; Kampouridis, Anthimos; Ziese-Kubon, Katharina; Hirsch, Ann-Catrin

    2015-04-01

    Seven intervarietal substitution lines were identified with embryogenic potentials up to 40.4 times that of the recurrent parent, providing an ideal material for further in depth studies of this trait. To identify genomic regions that carry genetic factors controlling embryogenic potential of isolated microspores of rapeseed, marker segregations were analysed in a segregating population of haploid microspore-derived embryos and a BC1 population from a cross between 'Express 617' and 'RS239'. After map construction 15 intervarietal substitution lines from the same cross with 'Express 617' as recurrent parent were selected with donor segments covering five genomic regions that had shown skewed segregations in the population of microspore-derived embryos but not in the BC1 population. By comparing the embryogenic potential of microspores of the 15 substitution lines and 'Express 617', seven lines were identified with significantly enhanced embryogenic potential ranging from 4.1 to 40.4 times that of 'Express 617'. To improve the genetic characterization of the selected lines, they were subjected to a high-throughput SNP analysis using the Illumina Infinium 60K chip for rapeseed. Based on 7,960 mapped SNP markers, one to eight donor segments per line, which cover 0.64-6.79% of the 2,126.1 cM of the SNP map, were found. The SNP analysis also gave evidence that homoeologous exchanges had occurred during the development of the substitution line population, increasing the genetic diversity within this population. By comparing donor segments between lines with significantly enhanced embryogenic potential and non-significant lines, 12 genomic regions were identified that may contain genetic factors controlling embryogenic potential in rapeseed. These regions range in size from 0 (represented by just one marker) to 26.8 cM and cover together just 5.42% of the SNP map.

  18. Simultaneous substitution of Gly96 to Ala and Ala183 to Thr in 5-enolpyruvylshikimate-3-phosphate synthase gene of E. coli (k12) and transformation of rapeseed (Brassica napus L.) in order to make tolerance to glyphosate.

    Science.gov (United States)

    Kahrizi, Danial; Salmanian, Ali Hatef; Afshari, Afsoon; Moieni, Ahmad; Mousavi, Amir

    2007-01-01

    Glyphosate is a non-selective broad-spectrum herbicide that inhibits 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS). This is a key enzyme in the aromatic amino acid biosynthesis pathway of microorganisms and plants. The manipulation of bacterial EPSPS gene in order to reduce its affinity for glyphosate, followed by its transfer to plants is one of the most effective approaches for the production of glyphosate-tolerant plants. In this study, we chose to focus on amino acid residues glycine96 and alanine183 of the E. coli (k12) EPSPS enzyme. These two amino acids are important residues for glyphosate binding. We used site directed mutagenesis (SDM) to induce point mutations in the E. coli EPSPS gene, in order to convert glycine96 to alanine (Gly96Ala) and alanine183 to threonine (Ala183Thr). After confirming the mutation by sequencing, the altered EPSPS gene was transferred to rapeseed (Brassica napus L.) via Agrobacterium-mediated transformation. The transformed explants were screened in shoot induction medium containing 25 mg L-1 kanamycin. Glyphosate tolerance was assayed in putative transgenic plants. Statistical analysis of data showed that there was a significant difference between the transgenic and control plants. It was observed that transgenic plants were resistant to glyphosate at a concentration of 10 mM whereas the non-transformed control plants were unable to survive 1 mM glyphosate. The presence and copy numbers of the transgene were confirmed with PCR and Southern blotting analysis, respectively.

  19. Mitogen-activated protein kinase kinase kinase (MAPKKK) 4 from rapeseed (Brassica napus L.) is a novel member inducing ROS accumulation and cell death

    Energy Technology Data Exchange (ETDEWEB)

    Li, Liang, E-mail: 18710470987@163.com; Ye, Chaofei, E-mail: yechaofei001@163.com; Zhao, Rui, E-mail: 571828628@qq.com; Li, Xin, E-mail: 1458272138@qq.com; Liu, Wu-zhen, E-mail: happywuzhenliu@163.com; Wu, Feifei, E-mail: 283915941@qq.com; Yan, Jingli, E-mail: yanjingli512@163.com; Jiang, Yuan-Qing, E-mail: jiangyq@nwafu.edu.cn; Yang, Bo, E-mail: yangwl@nwafu.edu.cn

    2015-11-27

    MAPKKK is the largest family of MAPK cascade, which is known to play important roles in plant growth, development and immune responses. So far, only a few have been functionally characterized even in the model plant, Arabidopsis due to the potential functional redundancy of MAPKKK. We previously identified and cloned a few MAPKKK family genes from rapeseed. In this study, BnaMAPKKK4 was characterized as a member in eliciting accumulation of reactive oxygen species (ROS) and hypersensitive response (HR)-like cell death. This is accompanied with accumulation of malondialdehyde (MDA), anthocyanin as well as nuclear DNA fragmentation. The transcript abundance of a series of ROS accumulation, cell death, and defense response related genes were up-regulated by the expression of MAPKKK4. Further investigation identified BnaMAPKKK4 elicited ROS through the downstream MPK3. These results indicate that BnaMAPKKK4 and its downstream components function in the ROS-induced cell death. - Highlights: • Expression of rapeseed MAPKKK4 induced ROS accumulation and cell death in leaves. • Cell death induced by MAPKKK4 is associated with membrane lipid peroxidation and DNA fragmentation. • MAPKKK4 interacts with MKK5 and MPK3. • MAPKKK4-induced ROS accumulation and cell death require downstream WIPK and SIPK. • MAPKKK4 is a novel MAPKKK modulating ROS accumulation and cell death.

  20. Genome-wide analysis of the auxin/indoleacetic acid (Aux/IAA) gene family in allotetraploid rapeseed (Brassica napus L.).

    Science.gov (United States)

    Li, Haitao; Wang, Bo; Zhang, Qinghua; Wang, Jing; King, Graham J; Liu, Kede

    2017-11-16

    Auxin/Indoleacetic acid (Aux/IAA) genes participate in the auxin signaling pathway and play key roles in plant growth and development. Although the Aux/IAA gene family has been identified in many plants, within allotetraploid Brassica napus little is known. In this study, a total of 119 Aux/IAA genes were found in the genome of B. napus. They were distributed non-randomly across all 19 chromosomes and other non-anchored random scaffolds, with a symmetric distribution in the A and C subgenomes. Evolutionary and comparative analysis revealed that 111 (94.1%) B. napus Aux/IAA genes were multiplied due to ancestral Brassica genome triplication and recent allotetraploidy from B. rapa and B. oleracea. Phylogenetic analysis indicated seven subgroups containing 29 orthologous gene sets and two Brassica-specific gene sets. Structures of genes and proteins varied across different genes but were conserved among homologous genes in B. napus. Furthermore, analysis of transcriptional profiles revealed that the expression patterns of Aux/IAA genes in B. napus were tissue dependent. Auxin-responsive elements tend to be distributed in the proximal region of promoters, and are significantly associated with early exogenous auxin up-regulation. Members of the Aux/IAA gene family were identified and analyzed comprehensively in the allotetraploid B. napus genome. This analysis provides a deeper understanding of diversification of the Aux/IAA gene family and will facilitate further dissection of Aux/IAA gene function in B. napus.

  1. Solubility of a cruciferin-rich protein product purified from rapeseed pressed cake (Brassica napus L.) by an aqueous processing method

    DEFF Research Database (Denmark)

    Rehder, Alina; Sulewska, Anna Maria; Markedal, Keld Ejdrup

    2017-01-01

    as food ingredients. A novel cruciferin-rich rapeseed protein product was produced by an aqueous processing method in pilot plant scale. Intact glucosinolates were conserved by this procedure and largely removed from the protein products. Protein solubility in this product was examined when dispersed...... in 50 mm phosphate buffer, pH 8.0 with varying NaCl concentration (0-500 mm). Unexpectedly, a salting-out effect was observed of the globulin proteins, as 15.9 ± 0.6% protein was in solution at 500 mm added NaCl, whereas 21.5 ± 1.1% was solubilised without added NaCl; whether the observed effects...

  2. Effects of Super-Absorbent Polymer Application on Yield and Yield Components of Rapeseed (Brassica napus L.

    Directory of Open Access Journals (Sweden)

    Fariborz SHEKARI

    2015-09-01

    Full Text Available Limitation of water resources and its great impact on agricultural and natural resources play a crucial role in the efficiency of water use. Applying super absorbent polymer to the soil may be one of the methods to minimize the stress of weather dryness in arid and semi-arid regions. In order to evaluate the effects of hydrophilic polymer application on yield and water use efficiency of rapeseed plants, an experiment was conducted under field condition in 2012 at the Research Farm of the Faculty of Agriculture, University of Maragheh. Treatments’ factors were: (i 3 super absorbent polymers (SAP (Taravat A200 levels of 0 (without application, 75 and 150 kg ha-1 A200 application, (ii three irrigation levels of 80, 120 and 180 mm evaporation from class A basin in main plots, (iii two cultivars ʻHyola 401ʼ and ʻRVSʼ in sub plots as factorial split plot combination based on completely randomized block design with three replications. The results showed that in all of the measured traits within the experiment there were significant differences between SAP levels. Furthermore, increasing irrigation interval led to an increase in a thousand seeds’ weight, but decreased seed yield. Increasing water stress raised seed oil percent and infertile silique and subsequently resulted in reduced oil yield. ʻHyola 401ʼ was more susceptible to embryo abortion compared with ʻRVSʼ. As a conclusion of the research, SAP (A200 application in quantities smaller than 75 kg ha-1 may be recommended for rapeseed production under field condition.

  3. A Genome-Wide Association Study Reveals New Loci for Resistance to Clubroot Disease in Brassica napus

    OpenAIRE

    Li, Lixia; Luo, Yujie; Chen, Biyun; Xu, Kun; Zhang, Fugui; Li, Hao; Huang, Qian; Xiao, Xin; Zhang, Tianyao; Hu, Jihong; Li, Feng; Wu, Xiaoming

    2016-01-01

    Rapeseed (Brassica napus L.) is one of the most important oil crops in the world. However, the yield and quality of rapeseed were largely decreased by clubroot (Plasmodiophora brassicae Woronin). Therefore, it is of great importance for screening more resistant germplasms or genes and improving the resistance to P. brassicae in rapeseed breeding. In this study, a massive resistant identification for a natural global population was conducted in two environments with race/pathotype 4 of P. bras...

  4. Changes in Growth and Oil Yield Indices of Rapeseed (Brassica napus L., cv. Hyola 401 in Different Concentrations andTimes of Application of Supplementary Nitrogen Fertilizer

    Directory of Open Access Journals (Sweden)

    P. Tousi Kehal

    2013-03-01

    Full Text Available In order to investigate the effect of concentration and time of supplementary nitrogen fertilizer spray on growth indices of rapeseed (cv. Hyola 401, a field experiment was conducted at Rice Research Institute of Iran as a randomized complete blocks design with 16 treatments and 3 replications in 2008-2009. The treatments included concentration of nitrogen fertilizer (urea at two levels (5 and 10 ppm in seven levels of application time:1 spraying at 6-8- leaf stage, 2 beginning of stem elongation, 3 prior to flowering, 4 at 6-8- leaf stage + beginning of stem elongation, 5 at 6-8- leaf + prior to flowering, 6 beginning of stem elongation+ prior to flowering, and 7 at 6-8- leaf + beginning of stem elongation+ prior to flowering, which were compared with two control treatments (no fertilizer nitrogen and conventional soil fertilization. Results showed that significant difference was observed between spray treatments including concentration and times of nitrogen application, between controls and between controls with spray treatments, of grain and oil yield, crop growth rate (CGR, leaf area index (LAI and leaf area duration (LAD. Application of nitrogen (10 ppm at the beginning of stem elongation+ prior to flowering stages produced maximum grain yield (4221.7 kg/ha and oil yield (1771.1 kg/ha. Spray treatments produced maximum oil yield index (15.3% compared to controls. Maximum LAI (6.9 and 5.6 respectively, CGR (15.2 and 14.3 g/m2.10 GDD, respectively and LAD (1204 and 1029 cm2/10 GDD, respectively were also obtained from spray application of nitrogen (10 ppm at the beginning of stem elongation+ prior to flowering stages and at 6-8-leaf stage + beginning of stem elongation + prior to flowering. According to the results of the present investigation, it seems that foliar application of supplementary nitrogen fertilizer at the end growth stages (beginning of stem elongation and prior to flowering of rapeseed plants may help to enhance growth indices

  5. Characterization of the straw stalk of the rapeseed plant as a biomass energy source

    Energy Technology Data Exchange (ETDEWEB)

    Karaosmanoglu, F.; Tetik, E.; Gurboy, B.; Sanli, I.

    1999-10-01

    Oil seed plants are important biomass energy sources. The rapeseed plant, which yields a high amount of vegetable oil, has a major position among other oil seed plants. In this study the straw stalk of the rapeseed plant (type 00 Brassica napus L.) has been investigated as a candidate for a biomass energy source. (author)

  6. Characterization of the straw stalk of the rapeseed plant as a biomass energy source

    Energy Technology Data Exchange (ETDEWEB)

    Karaosmanoglu, F.; Tetik, E. [Istanbul Technical Univ. (Turkey). Chemical Engineering Dept.; Guerboy, B.; Sanli, I. [Istanbul Univ. (Turkey). Faculty of Forestry

    1999-11-01

    Oil seed plants are important biomass energy sources. The rapeseed plant, which yields a high amount of vegetable oil, has a major position among other oil seed plants. In this study the straw stalk of the rapeseed plant (type 00 Brassica napus L.) has been investigated as a candidate for a biomass energy source.

  7. Effect of salinity and priming on seedling growth in rapeseed (Brassica napus var oleifera Del. - doi: 10.4025/actasciagron.v35i4.17655

    Directory of Open Access Journals (Sweden)

    Paolo Benincasa

    2013-05-01

    Full Text Available Experiments were performed to examine the effect of salt stress and GA3-priming on initial growth of two rapeseed cultivars, one tolerant and one sensitive to salt stress during germination. Seedlings from seeds germinated in salty (as NaCl and non salty substrate were grown in salty and non salty hydroponics. Salt stress reduced seedling growth of the two genotypes consistently with their degree of stress tolerance during germination. Seedlings from stress sensitive seeds germinated under high salinity showed a rapid recover of growth in non stressing conditions. The effect of salt stress on shoot/root ratio was controversial, increased for lab and decreased for greenhouse experiments, probably due to different timing of stress application and additional experimental conditions. Salt stress decreased leaf photosynthesis and increased thermal dissipation in sensitive seedlings (decrease of ΦPSII and qP, increase of NPQ. The GA3-priming did not affect seedling growth of the stress sensitive cultivar subjected to stress, while it greatly improved the performance of the stress tolerant cultivar.

  8. Distributions of imidacloprid, imidacloprid-olefin and imidacloprid-urea in green plant tissues and roots of rapeseed (Brassica napus) from artificially contaminated potting soil.

    Science.gov (United States)

    Seifrtova, Marcela; Halesova, Tatana; Sulcova, Klara; Riddellova, Katerina; Erban, Tomas

    2017-05-01

    Imidacloprid-urea is the primary imidacloprid soil metabolite, whereas imidacloprid-olefin is the main plant-relevant metabolite and is more toxic to insects than imidacloprid. We artificially contaminated potting soil and used quantitative UHPLC-QqQ-MS/MS to determine the imidacloprid, imidacloprid-olefin and imidacloprid-urea distributions in rapeseed green plant tissues and roots after 4 weeks of exposure. In soil, the imidacloprid/imidacloprid-urea molar ratios decreased similarly after the 250 and 2500 µg kg-1 imidacloprid treatments. The imidacloprid/imidacloprid-urea molar ratios in the root and soil were similar, whereas in the green plant tissue, imidacloprid-urea increased more than twofold compared with the root. Although imidacloprid-olefin was prevalent in the green plant tissues, with imidacloprid/imidacloprid-olefin molar ratios of 2.24 and 1.47 for the 250 and 2500 µg kg-1 treatments respectively, it was not detected in the root. However, imidacloprid-olefin was detected in the soil after the 2500 µg kg-1 imidacloprid treatment. Significant proportions of imidacloprid-olefin and imidacloprid-urea in green plant tissues were demonstrated. The greater imidacloprid supply increased the imidacloprid-olefin/imidacloprid molar ratio in the green plant tissues. The absence of imidacloprid-olefin in the root excluded its retransport from leaves. The similar imidacloprid/imidacloprid-urea ratios in the soil and root indicated that the root serves primarily for transporting these substances. © 2016 Society of Chemical Industry. © 2016 Society of Chemical Industry.

  9. Effects of Source and Rate of Nitrogen Fertilizer on Yield, Yield Components and Quality of Winter Rapeseed (Brassica napus L. Efecto de la Fuente y Dosis de Fertilizantes Nitrogenados en el Rendimiento, Componentes de Rendimiento y Calidad de Semilla de Canola (Brassica napus L.

    Directory of Open Access Journals (Sweden)

    Özden Öztürk

    2010-03-01

    Full Text Available Winter rapeseed (Brassica napus L. has potential to become an alternate oilseed crop both for edible oil production and energy agriculture (biofuel production for Turkey. This study was conducted to determine the effect of year, N sources and doses on the yield and quality traits of winter rapeseed in a cereal system in calcareous soils over two seasons, 2000-2001 and 2001-2002, in Central Anatolia. Three N sources, ammonium sulfate, ammonium nitrate and urea, were applied as hand broadcast on the soil surface at five doses (0, 50, 100, 150, and 200 kg N ha-1. The traits investigated were plant height, number of branches and pods per plant, number of seed per pod, thousand seed weight, seed yield, oil and protein content. There were significantly effects on seed yield, oil and protein content, and other yield components due to N sources and rates. In general, ammonium sulfate and urea gave higher seed yield than ammonium nitrate. Mean values of both seasons indicated that 100 and 150 kg N ha-1 rate increased significantly yield and quality traits with regard to other N treatments. The present results highlight the practical importance of adequate N fertilization and true N source in seed yield in winter rapeseed and suggest that ammonium sulfate at 150 kg N ha-1 will be about adequate to meet crop N requirements.El raps (Brassica napus L. tiene potencial para convertirse en un cultivo oleaginoso alternativo para producción de aceite comestible y agricultura energética (producción de biodiesel en Turquía. Este estudio fue conducido para determinar el efecto del año, fuente y dosis de N en las características de rendimiento y calidad de raps en un sistema cerealero en suelos calcáreos en dos temporadas, 2000-2001 y 2001-2002, en Anatolia Central. Se aplicaron al voleo tres fuentes de N (sulfato de amonio, nitrato de amonio y urea en cinco dosis (0, 50, 100, 150 y 200 kg N ha-1. Las características investigadas fueron altura de planta, n

  10. Effect of Nitrogen and Zinc Sulphate Fertilizers and Azotobacter and Azospirillum Biofertilizer on Yield and Growth Traits of Rapeseed (Brassica napus L.

    Directory of Open Access Journals (Sweden)

    N. Jafari

    2013-06-01

    Full Text Available In order to study the effects of simultaneous application of nitrogen (N and ZnSO4 fertilizers and biofertilizer (Azotobacter and Azospirillum on grain yield and growth traits of rapeseed, Hyola308 cultivar, a field experiment, with split plot factorial layout based on randomized complete blocks design with three replications, was conducted at Research Field of Faculty of Agriculture, University of Guilan, Rasht, Iran, during 2007-2008 growing season. Nitrogen fertilizer at four levels (0, 50, 100 and 150 kg/ha were the main plot and ZnSO4 fertilizer at two levels (0 and 50 kg/ha and biofertilizer at two levels (with and without biofertilizer were arranged in sub-plots. Results showed that maximum and minimum leaf area indices at flowering stage (average of 1.29 and 0.95, respectively were obtained in 150 kg/ha N+ZnSO4+ biofertilizer and in 50 kg/ha N+ no ZnSO4+ no biofertilizer treatments. Maximum and minimum crop growth rates at flowering stage (average of 5.89 and 3.19 g/m2.GDD, respectively were obtained in 150 kg/ha N+ZnSO4+ biofertilizer and control treatments. Maximum and minimum grain yields (2568, 2468 and 543 kg/ha, respectively were obtained in 150 kg/ha N+ with/without ZnSO4+ biofertilizer and control (no fertilizer treatments. Maximum and minimum oil yields (42.8 and 37.3%, respectively were measured in 0 kg/ha N+ZnSO4+ biofertilizer and 150 kg/ha N+ no ZnSO4+ no biofertilizer treatments. Since there was no significant difference between 150 and 100 kg/ha N+ZnSO4+ biofertilizer treatments in terms of impact on canola grain yield and growth traits, it seems that application of biofertilizer (Azotobacter and Azospirillum, without any reduction in yield, increased grain production and oil content and saved 50 kg/ha of N fertilizer. Biofertilizer (Azotobacter and Azospirillum, along with zinc and sulfur, produced phytohormones, and N fertilizer increased dry matter accumulation and leaf area index (by increasing carbohydrate conversion

  11. Effects of a controlled-release fertilizer on yield, nutrient uptake, and fertilizer usage efficiency in early ripening rapeseed (Brassica napus L.).

    Science.gov (United States)

    Tian, Chang; Zhou, Xuan; Liu, Qiang; Peng, Jian-Wei; Wang, Wen-Ming; Zhang, Zhen-Hua; Yang, Yong; Song, Hai-Xing; Guan, Chun-Yun

    Nitrogen (N), phosphorous (P), and potassium (K) are critical nutrient elements necessary for crop plant growth and development. However, excessive inputs will lead to inefficient usage and cause excessive nutrient losses in the field environment, and also adversely affect the soil, water and air quality, human health, and biodiversity. Field experiments were conducted to study the effects of controlled-release fertilizer (CRF) on seed yield, plant growth, nutrient uptake, and fertilizer usage efficiency for early ripening rapeseed (Xiangzayou 1613) in the red-yellow soil of southern China during 2011-2013. It was grown using a soluble fertilizer (SF) and the same amounts of CRF, such as SF1/CRF1 (3750 kg/hm2), SF2/CRF2 (3000 kg/hm2), SF3/CRF3 (2250 kg/hm2), SF4/CRF4 (1500 kg/hm2), SF5/CRF5 (750 kg/hm2), and also using no fertilizer (CK). CRF gave higher seed yields than SF in both seasons by 14.51%. CRF4 and SF3 in each group achieved maximum seed yield (2066.97 and 1844.50 kg/hm2, respectively), followed by CRF3 (1929.97 kg/hm2) and SF4 (1839.40 kg/hm2). There were no significant differences in seed yield among CK, SF1, and CRF1 (P>0.05). CRF4 had the highest profit (7126.4 CNY/hm2) and showed an increase of 12.37% in seed yield, and it decreased by 11.01% in unit fertilizer rate compared with SF4. The branch number, pod number, and dry matter weight compared with SF increased significantly under the fertilization of CRF (Pfertilizer rate at maturity, and the N, P, and K usage efficiency decreased with increasing the fertilizer rate. The N, P, and K uptakes and usage efficiencies of the CRF were significantly higher than those of SF (Pfertilizer, by providing sufficient N in the later growth stages, and last by reducing the residual N in the soil and increasing the N accumulation and N usage efficiency.

  12. USING Xanthomonas Campestris

    African Journals Online (AJOL)

    eobe

    study by Huanget al. [18]. The peels were washed with clean water to remove any adhering dirt after which they were blended to obtain a slurry which was autoclaved ..... Xanthan employing Xanthomonas campestris using. Sugarcane Molasses”,. American Journal of. Environmental Engineering, Vol. 2, Number 2, 2012, pp.

  13. Achievements in NS rapeseed hybrids breeding

    Directory of Open Access Journals (Sweden)

    Marjanović-Jeromela Ana

    2016-01-01

    Full Text Available The increased production of oilseed rape (Brassica napus L. is evident on a global scale, but also in Serbia in the last decade. Rapeseed is used primarily for vegetable oil and processing industry, but also as a source of protein for animal feed and green manure. Following the cultivation of varieties, breeding and cultivation of hybrid rapeseed started in the 1990's, to take advantage of heterosis in F1 generation, while protecting the breeder's rights during seed commercialization. The breeding of hybrid oilseed rape requires high quality starting material (lines with good combining abilities for introduction of male sterility. Ogura sterility system is primarily used at the Institute of Field and Vegetable Crops, Novi Sad, Serbia. To use this system, separate lines are modified with genes for cytoplasmic male sterility (cms female line - mother line and restoration of fertility (Rf male lines - father line. In order to maintain the sterility of the mother line it is necessary to produce a maintainer line of cytoplasmic male sterility. Creation of these lines and hybrids at the Institute of Field and Vegetable Crops was successfully monitored with intense use of cytogenetic laboratory methods. The structure and vitality of pollen, including different phases during meiosis were checked so that cms stability was confirmed during the introduction of these genes into different lines. Rapeseed breeding program in Serbia resulted in numerous varieties through collaboration of researchers engaged in breeding and genetics of this plant species. So far, in addition to 12 varieties of winter rapeseed and two varieties of spring rapeseed, a new hybrid of winter rapeseed NS Ras was registered in Serbia. NS Ras is an early-maturing hybrid characterized by high seed yield and oil content. Average yield of NS Ras for two seasons and three sites was 4256 kg ha-1 of seed and 1704 kg ha-1 of oil. Three promising winter rapeseed hybrids are in the process of

  14. Detecção, transmissão e efeito de Xanthomonas campestris pv. campestris na qualidade fisiológica de sementes de brócolis Detection, transmission and effect of Xanthomonas campestris pv. campestris in the physiological quality of broccoli seeds

    OpenAIRE

    Nilvanira Donizete Tebaldi; Rita de Cássia Panizzi; Rubens Sader

    2007-01-01

    A detecção, a transmissão e o efeito de Xanthomonas campestris pv. campestris (Xcc) na qualidade fisiológica de sementes de brócolis (Brassica oleracea var. italica) foram avaliadas, a partir de sementes obtidas de plantas ("Baron, Flórida, Hana Midori Sakata, Precoce Piracicaba de Verão, Ramoso Santana e Sabre") inoculadas com a bactéria, em condições de campo. Para a detecção do patógeno nas sementes foram utilizados os meios de cultura semi-seletivos: SX ágar, NSCAA e BSCAA; a taxa de tran...

  15. Genetic diversity evaluation of rapeseed genotypes ( Brassica ...

    African Journals Online (AJOL)

    Path analysis showed that number of pods per main branch had the highest direct effect on seed yield. Stepwise regressing showed numbers of pods per main branch was entered as the first variable in the model and explained 79% of seed yield variation. Phenotypic cluster showed that genotypes were divided into 4 ...

  16. The phytotoxic effects and biodegradability of stored rapeseed oil and rapeseed oil methyl ester

    Directory of Open Access Journals (Sweden)

    V. VAUHKONEN

    2008-12-01

    Full Text Available The aims of this study were to determine the phytotoxicity of stored rapeseed (Brassica rapa oil (RSO and rapeseed oil methyl ester (RME after "spill like" contamination on the growth of barley (Hordeum vulgare and the biodegradability of these substances in OECD 301F test conditions and in ground water. Rapeseed oil and rapeseed oil methyl ester were both stored for a period of time and their fuel characteristics (e.g. acid number had changed from those set by the fuel standards and are considered to have an effect on its biodegradation. The phytotoxicity was tested using two different types of barley cultivars: ‘Saana’ and ‘Vilde’. The phytotoxic effect on the barley varieties was determined, after the growth season, by measuring the total biomass growth and the mass of 1000 kernels taken from the tests plots. Also visual inspection was used to determine what the effects on the barley growth were. These measurements suggest that both RSO and RME have a negative impact on barley sprouts and therefore the total growth of the barley. RSO and RME both decreased the total amount of harvested phytomass. The weight of 1000 kernels increased with low concentrations of these contaminants and high contamination levels reduced the mass of the kernels. The results of these experiments suggest that the stored rapeseed oil and rapeseed oil methyl ester are both phytotoxic materials and therefore will cause substantial loss of vegetation in the case of a fuel spill. The RSO and RME biodegraded effectively in the measurement period of 28 days under OECD test conditions: the degree of biodegradation being over 60%. The biodegradation in the ground water was much slower: the degree of biodegradation being about 10% after 28 days.;

  17. Seed structure characteristics to form ultrahigh oil content in rapeseed.

    Directory of Open Access Journals (Sweden)

    Zhi-Yong Hu

    Full Text Available Rapeseed (Brassica napus L. is an important oil crop in the world, and increasing its oil content is a major breeding goal. The studies on seed structure and characteristics of different oil content rapeseed could help us to understand the biological mechanism of lipid accumulation, and be helpful for rapeseed breeding.Here we report on the seed ultrastructure of an ultrahigh oil content rapeseed line YN171, whose oil content is 64.8%, and compared with other high and low oil content rapeseed lines. The results indicated that the cytoplasms of cotyledon, radicle, and aleuronic cells were completely filled with oil and protein bodies, and YN171 had a high oil body organelle to cell area ratio for all cell types. In the cotyledon cells, oil body organelles comprised 81% of the total cell area in YN171, but only 53 to 58% in three high oil content lines and 33 to 38% in three low oil content lines. The high oil body organelle to cotyledon cell area ratio and the cotyledon ratio in seed were the main reasons for the ultrahigh oil content of YN171. The correlation analysis indicated that oil content is significantly negatively correlated with protein content, but is not correlated with fatty acid composition.Our results indicate that the oil content of YN171 could be enhanced by increasing the oil body organelle to cell ratio for some cell types. The oil body organelle to seed ratio significantly highly positively correlates with oil content, and could be used to predict seed oil content. Based on the structural analysis of different oil content rapeseed lines, we estimate the maximum of rapeseed oil content could reach 75%. Our results will help us to screen and identify high oil content lines in rapeseed breeding.

  18. High Quality Rapeseed Products as Feed for Sensitive Monogastrics

    DEFF Research Database (Denmark)

    Frandsen, Heidi Blok

    . Glucosinolates can be transformed enzymatic by the enzyme myrosinase (EC. 3.2.1.147), or non-enzymatic by heat treatment or under the acidic and reducing conditions in the stomach of monogastrics. The type of transformation product depends on the parent glucosinolate and of the chemical conditions, and in some...... for cheaper protein rapeseed meal has been considered as an alternative to soya-protein. Rapeseed (Brassica napus L. spp. oleifera) has a well-balanced amino acid profile for monogastrics, but it contains several compounds which are anti-nutritional and might lower the protein quality and limit the amount...... cake was included, while losses up to 88% were observed when cold-pressed rapeseed caked was used. N-balance trials with rats clearly demonstrated effects on the biologic value caused by high glucosinolate concentrations, active myrosinase and long temperature treatments. The second study (manuscript...

  19. DNA polymorphism analysis of Xanthomonas campestris pv ...

    African Journals Online (AJOL)

    strand conformation polymorphism (SSCP) techniques using M13 and 16S rRNA primers, respectively, for genotyping of the phytopathogenic bacterium Xanthomonas campestris pv. campestris was studied. RAPD provided a simple, rapid, and ...

  20. Antagonism of Bacillus spp. against Xanthomonas campestris pv. campestris

    Directory of Open Access Journals (Sweden)

    Leila Monteiro

    2005-01-01

    Full Text Available The antagonism of eight Bacillus isolates was investigated against nine strains of Xanthomonas campestris pv. campestris (causal agent of crucifers black rot to assess the role of lipopeptides in this process. Antimicrobial and hemolytic (surfactant activity tests were performed in vitro using agar diffusion methods. Antibiosis and hemolysis were positive for four Bacillus isolates against all X. campestris pv. campestris strains. The correlation observed between antimicrobial and hemolytic activities indicated that lipopeptides were involved in the antibiosis mechanism of the studied antagonists. Fermentation studies were carried out with the isolates that showed highest antimicrobial and hemolytic activities, to follow up growth and production of bioactive and surfactant compounds. Production of bioactive and surfactant compounds was observed during the late growth phase of the Bacillus isolates.Investigação sobre o antagonismo de oito isolados de Bacillus: B. subtilis R14, B. megaterium pv. cerealis RAB7, B. megaterium pv. cerealis C211, B. megaterium C116, Bacillus sp. RAB9, B. cereus C240, Bacillus sp. C11 e B. cereus C210, contra nove linhagens de X. campestris pv. campestris (bactéria responsável pela podridão negra das crucíferas foi realizada para se verificar a participação de lipopeptídeos neste mecanismo. Testes de atividades antimicrobiana e hemolítica (surfactante foram realizados, utilizando-se o método de difusão em ágar. Antibiose e hemólise foram positivas para quatro isolados de Bacillus: R14, RAB7, C116 e C210. A correlação observada entre as atividades antimicrobiana e a hemolítica indica que lipopeptídeos estão envolvidos no mecanismo de antibiose dos isolados investigados. As fermentações foram realizadas com os isolados que demonstraram melhores resultados nos testes de atividades antimicrobiana e hemolítica: R14, RAB7 e C116, para acompanhar o crescimento e a produção de compostos bioativos e

  1. Comparative study of rapeseed, monofloral types and multifloral honey by some physicochemical parameters

    Directory of Open Access Journals (Sweden)

    I. Zhelyazkova

    2017-12-01

    Full Text Available Abstract. The objective of the present study is to make a comparative analysis of some basic qualitative parameters of rapeseed (Brassica napus honey, monofloral (acacia Robinia pseudoacacia, sunflower Helianthus annuus, coriander Coriandrum sativum, lime Tilia sp., and multifloral honey. The study uses 26 samples of bee honey from different regions in the country. The physicochemical study was carried out at the Scientific Research Laboratory of Trakia University according to the harmonized methods of the International Honey Commission and the methods described in Bulgarian State Standard (BSS 3050- 80 and Regulation No. 48/2003. The following indicators have been investigated: water, glucose, fructose and sucrose content (%; hydroxymethylfurfural content (HMF, mg/kg; electrical conductivity (mS/cm. Based on the results obtained for glucose (G and fructose (F content in the honey samples, the sum total of G + F has been calculated. It has been found that the average values of the studied physico-chemical parameters in all analyzed honey samples (incl. rapeseed honey are within the tolerable limits according to national regulations. The established deviations from the requirements concerning HMF content in rapeseed honey samples can be explained by technological errors rather than by plant origin. By glucose content the analyzed rapeseed honey samples have values close to those of sunflower honey (over 30%. These results can explain the rapid crystallization of rapeseed and sunflower honey. The lowest average electrical conductivity values have been established for rapeseed and acacia honey, which is a characteristic feature of light coloured honey types. Rapeseed and multifloral honey have higher average active acidity value (pH compared to the average for the monofloral honey types. Based on the results, it can be concluded that rapeseed bee honey (Brassica napus is of quality, does not differ from the monofloral and multifloral types produced

  2. Xanthan gum production by Xanthomonas campestris pv ...

    African Journals Online (AJOL)

    Cassava starch is a main renewable bio-resource with low price and mass production in Guangxi, China. It was used as carbon source in growing Xanthomonas campestris pv. campestris 8004 (Xcc 8004) for xanthan gum production in this study. The xanthan gum yield of gelatinized cassava starch was higher than that of ...

  3. Molecular phylogenetic implications in Brassica napus based on ...

    Indian Academy of Sciences (India)

    Brassica napus L. (canola, rapeseed) is one of the most important oil crops in many countries (Abdelmigid 2012;. Fayyaz et al. 2014), and thought to have originated from a cross where the maternal donor was closely related to two diploid species, B. oleracea (CC, 2n = 18) and B. rapa (AA, 2n = 20). Here, molecular ...

  4. Immunopurification and characterization of a rape ( Brassica napus L.)

    African Journals Online (AJOL)

    Lipase or triacylglycerol acylhydrolase (E.C.3.1.1.3) was purified to homogeneity from rapeseed-germinated cotyledons (Brassica napus L.). The purification scheme involved homogenization, centrifugation, ultracentrifugation and affinity chromatography using polyclonal antibodies raised against porcine pancreatic lipase.

  5. Molecular characterization of some local and exotic Brassica juncea ...

    African Journals Online (AJOL)

    The production of Brassica germplasm with a wider genetic base is essential for using them properly in the genetic improvement of rapeseed/mustard. During the present study, different RAPD (Random Amplified Polymorphic DNA) primers were used to estimate the genetic distances among thirty different genotypes in all ...

  6. The progress of intersubgenomic heterosis studies in Brassica napus

    African Journals Online (AJOL)

    ONOS

    2010-03-15

    Mar 15, 2010 ... Cloning, chromosome mapping and expression analysis of an R2R3-. MYB gene under-expressed in maize hybrid. Mol. Biol. Rep. 33: 103-. 110. Li M, Chen X, Meng J (2006). Intersubgenomic heterosis in rapeseed production with a partial new-typed Brassica napus containing subgenome Ar from B. rapa ...

  7. Combined transcriptome and proteome analysis identifies pathways and markers associated with the establishment of rapeseed microspore-derived embry development

    NARCIS (Netherlands)

    Joosen, R.V.L.; Cordewener, J.H.G.; Supena, E.D.J.; Vorst, O.F.J.; Lammers, M.; Maliepaard, C.A.; Zeilmaker, T.; Miki, B.L.A.; America, A.H.P.; Custers, J.B.M.; Boutilier, K.A.

    2007-01-01

    Microspore-derived embryo (MDE) cultures are used as a model system to study plant cell totipotency and as an in vitro system to study embryo development. We characterized and compared the transcriptome and proteome of rapeseed (Brassica napus) MDEs from the few-celled stage to the globular/heart

  8. Rapeseed rotation, compost and biocontrol amendments reduce soilborne diseases and increase tuber yield in conventional and organic potato production systems

    Science.gov (United States)

    Three different potential disease-suppressive management practices, including a Brassica napus (rapeseed) green manure rotation crop, a conifer-based compost amendment, and three biological control organisms (Trichoderma virens, Bacillus subtilis, and Rhizoctonia solani hypovirulent isolate Rhs1A1)...

  9. Use of rapeseed and pea grain protein supplements for organic milk production

    Directory of Open Access Journals (Sweden)

    H. KHALILI

    2008-12-01

    Full Text Available Grass-red clover silage was fed ad libitum. In experiment 1 a duplicated 4 x 4 Latin square design was used. A mixture of oats and barley was given at 8 kg (C. Three isonitrogenous protein supplements were a commercial rapeseed meal (218 g kg-1 dry matter (DM; RSM, crushed organic field pea (Pisum sativum L. (452 g kg-1 DM; P and a mixture of pea (321 g kg-1 DM and organic rapeseed (Spring turnip rape, Brassica rapa L. oleifera subv. annua (155 g kg-1 DM; PRS. Cows on P and PRS diets produced as much milk as cows on the RSM diet. Milk yield was higher but protein content lower with PRS diet than with diet P. In experiment 2 a triplicated 3 x 3 Latin square design was used. A mixture of oats (395 g kg-1 , barley (395 g kg-1 and a commercial heat-moisture treated rapeseed cake (210 g kg-1 was given at 8 kg (RSC. The second diet (ORSC consisted (g kg-1 of oats (375, barley (375 and cold-pressed organic rapeseed cake (250. The third diet (RSCO consisted (g kg-1 of oat (395, barley (395 and commercial heat-moisture treated rapeseed cake (250 and additional rapeseed oil (0.38 kg to balance fat content between ORSC and RSCO diets. There was no dietary effect on the yield of energy corrected milk. Milk yield was higher with RSCO diet compared with other diets.;

  10. Expression analysis of four flower-specific promoters of Brassica spp ...

    African Journals Online (AJOL)

    The 5'-flanking region of ca. 1200 bp upstream of the translation start site (TSS) of a putative cell wall protein gene was cloned from Brassica campestris, B. chinensis, B. napus and B. oleracea, and transferred to tobacco via Agrobacterium-mediation after fused to promoter-less beta-glucuronidase (GUS) reporter gene.

  11. Production of wide hybrids and backcross progenies between Diplotaxis erucoides and crop brassicas.

    Science.gov (United States)

    Vyas, P; Prakash, S; Shivanna, K R

    1995-03-01

    Intergeneric hybrids were produced between D. erucoides (♀), a wild species, and four cultivated species of Brassica, B. campestris, B. juncea, B. napus and B. oleracea, through embryo rescue. The hybrid nature of these plants was confirmed through morphological and cytological studies. Backcross pollinations with the pollen of the respective cultivars yielded BC progenies in the hybrids D. erucoides x B. juncea and D. erucoides x B. napus but not in D. erucoides x B. campestris and D. erucoides x B. oleracea. The hybrid D. erucoides x B. campestris was also used as a bridge species and crossed with B. juncea to raise the hybrid and backcross progenies. F2 progenies were more amenable than f1 hybrids for raising backcross progenies. Although D. erucoides is considered to be a close relative of B. campestris and B. oleracea, incompatibility barriers of this species with different cultivars do not reflect this relationship.

  12. Effect of different levels of water deficit on rapeseed (Brassica napus L. crop Efeito de diferentes níveis de déficit hídrico na cultura da canola

    Directory of Open Access Journals (Sweden)

    Carolina Bilibio

    2011-08-01

    Full Text Available Effects of different levels of water deficit applied during rapeseed crop development were assessed in a trial with metallic pots in greenhouse at the Department of Agricultural Engineering of Kassel University, Witzenhausen, Germany. A randomized block design was used with one cultivar (Ability Summer Rape and three levels of water deficit (0, 30, and 60% of evapotranspiration in three treatments and 20 replicates. Irrigation management was carried out through daily water balance, where ET = I - D; ET: evapotranspiration; I: irrigation; and D: drainage. The following evaluations were carried out weekly: stem diameter (mm; plant height (cm; number of leaves; number of branches and number of pods. At the end of the experiment, assessed total green matter (g plant-1, total dry matter (g plant-1, grain yield (g plant-1, grain protein content (% and grain oil content (% were also assessed. Data were submitted to variance analysis and the effect of the treatments was assessed by regression analysis. Results showed significant differences between the treatments in all analysed variables except for plant height and grain protein content, by test F at 5% probability. Factor of response ky, indicator of crop sensitivity to water deficit, was lower than one for all assessed variables. Grain yield showed the highest sensitivity to water deficit.Os efeitos de diferentes níveis de déficit hídrico, aplicados durante o desenvolvimento da canola, foram avaliados por meio de um experimento conduzido em vasos de metal no interior de uma casa de vegetação, no Departamento de Engenharia Agrícola, da Universidade de Kassel, Alemanha. Foi utilizado um delineamento inteiramente casualizado, com a cultivar Ability (Summer Rape, e três níveis de déficit de água, 0%, 30%, 60% da evapotranspiração da cultura, totalizando três tratamentos com 20 repetições. O manejo da irrigação foi realizado por meio do balanço hídrico diário, em que ET = I - D, onde

  13. Interactive Role of Fungicides and Plant Growth Regulator (Trinexapac on Seed Yield and Oil Quality of Winter Rapeseed

    Directory of Open Access Journals (Sweden)

    Muhammad Ijaz

    2015-09-01

    Full Text Available This study was designed to evaluate the role of growth regulator trinexapac and fungicides on growth, yield, and quality of winter rapeseed (Brassica napus L.. The experiment was conducted simultaneously at different locations in Germany using two cultivars of rapeseed. Five different fungicides belonging to the triazole and strobilurin groups, as well as a growth regulator trinexapac, were tested in this study. A total of seven combinations of these fungicides and growth regulator trinexapac were applied at two growth stages of rapeseed. These two stages include green floral bud stage (BBCH 53 and the course of pod development stage (BBCH 65. The results showed that plant height and leaf area index were affected significantly by the application of fungicides. Treatments exhibited induced photosynthetic ability and delayed senescence, which improved the morphological characters and yield components of rape plants at both locations. Triazole, in combination with strobilurin, led to the highest seed yield over other treatments at both experimental locations. Significant effects of fungicides on unsaturated fatty acids of rapeseed oil were observed. Fungicides did not cause any apparent variation in the values of free fatty acids and peroxide of rapeseed oil. Results of our study demonstrate that judicious use of fungicides in rapeseed may help to achieve sustainable farming to obtain higher yield and better quality of rapeseed.

  14. Transmission of Xanthomonas campestris pv. campestris in seed production crops of cauliflower

    NARCIS (Netherlands)

    Kastelein, P.; Krijger, M.C.; Zouwen, van der P.S.; Steen, van der J.J.M.; Stevens, L.H.; Wolf, van der J.M.; Fernandes Vieira, J.; Amaral Villela, F.

    2014-01-01

    n 2011, two polytunnel greenhouse experiments were conducted on seed production farms, one under conventional conditions in the South-West (Rilland) and the other under organic conditions in the East (Voorst) of the Netherlands, to study transmission routes of Xanthomonas campestris pv. campestris

  15. Flavonoids from Lonchocarpus campestris (Leguminosae); Flavonoides de Lonchocarpus campestris (Leguminosae)

    Energy Technology Data Exchange (ETDEWEB)

    Pires, Andreza Maria L.; Silveira, Edilberto R.; Pessoa, Otilia Deusdenia L., E-mail: opessoa@ufc.b [Universidade Federal do Ceara (DQOI/UFC), Fortaleza, CE (Brazil). Dept. de Quimica Organica e Inorganica

    2011-07-01

    A new flavone named 3,4',5,6-tetramethoxy-[2'', 3'':7,8] furanoflavone besides the known flavonoids (2S,3R,4S)-3,4,5,8-tetramethoxy-[2'',3'':6,7]-furanoflavan, 3,6-dimethoxy-2'',2''-dimethylcromene-[2'',3'':7,8]-flavone, 3,5,6-trimethoxy-[2'',3'':7,8]-furanoflavone, 2,4',4,5-tetramethoxy-[2'',3'':6,7]-furanodihydroaurone, (2R,3S,4S)-3,4,5,6-tetramethoxy-[2'',3'':7,8]-furanoflavan and 3',4'-methylenedioxy-5,6-dimethoxy-[2'',3'':7,8]-furanoflavone were isolated from the root barks of Lonchocarpus campestris. The complete {sup 1}H and {sup 13}C NMR assignments of the new furan flavonoid was performed using 1D and 2D pulse sequences, including COSY, HMQC and HMBC experiments. (author)

  16. Cloning and characterization of a pathogen-induced chitinase in Brassica napus

    DEFF Research Database (Denmark)

    Rasmussen, U.; Bojsen, K.; Collinge, D.B.

    1992-01-01

    A chitinase cDNA clone from rapeseed (Brassica napus L. ssp. oleifera) was isolated. The cDNA clone, ChB4, represents a previously purified and characterized basic chitinase isozyme. The longest open reading frame in ChB4 encodes a polypeptide of 268 amino acids. This polypeptide consists of a 24...

  17. Enteric methane production and ruminal fermentation of forage brassica diets fed in continuous culture

    Science.gov (United States)

    The aim of the current study was to determine nutrient digestibility, VFA production, N metabolism, and CH4 production of canola (Brassica napus L.), rapeseed (B. napus L.), turnip (B. rapa L.), and annual ryegrass (Lolium multiflorum Lam.) fed with orchardgrass (Dactylis glomerata L.) in continuous...

  18. In vitro activity of glucosinolates and their degradation products against brassica-pathogenic bacteria and fungi.

    Science.gov (United States)

    Sotelo, T; Lema, M; Soengas, P; Cartea, M E; Velasco, P

    2015-01-01

    Glucosinolates (GSLs) are secondary metabolites found in Brassica vegetables that confer on them resistance against pests and diseases. Both GSLs and glucosinolate hydrolysis products (GHPs) have shown positive effects in reducing soil pathogens. Information about their in vitro biocide effects is scarce, but previous studies have shown sinigrin GSLs and their associated allyl isothiocyanate (AITC) to be soil biocides. The objective of this work was to evaluate the biocide effects of 17 GSLs and GHPs and of leaf methanolic extracts of different GSL-enriched Brassica crops on suppressing in vitro growth of two bacterial (Xanthomonas campestris pv. campestris and Pseudomonas syringae pv. maculicola) and two fungal (Alternaria brassicae and Sclerotinia scletoriorum) Brassica pathogens. GSLs, GHPs, and methanolic leaf extracts inhibited the development of the pathogens tested compared to the control, and the effect was dose dependent. Furthermore, the biocide effects of the different compounds studied were dependent on the species and race of the pathogen. These results indicate that GSLs and their GHPs, as well as extracts of different Brassica species, have potential to inhibit pathogen growth and offer new opportunities to study the use of Brassica crops in biofumigation for the control of multiple diseases. Copyright © 2015, American Society for Microbiology. All Rights Reserved.

  19. In Vitro Activity of Glucosinolates and Their Degradation Products against Brassica-Pathogenic Bacteria and Fungi

    Science.gov (United States)

    Sotelo, T.; Lema, M.; Soengas, P.; Cartea, M. E.

    2014-01-01

    Glucosinolates (GSLs) are secondary metabolites found in Brassica vegetables that confer on them resistance against pests and diseases. Both GSLs and glucosinolate hydrolysis products (GHPs) have shown positive effects in reducing soil pathogens. Information about their in vitro biocide effects is scarce, but previous studies have shown sinigrin GSLs and their associated allyl isothiocyanate (AITC) to be soil biocides. The objective of this work was to evaluate the biocide effects of 17 GSLs and GHPs and of leaf methanolic extracts of different GSL-enriched Brassica crops on suppressing in vitro growth of two bacterial (Xanthomonas campestris pv. campestris and Pseudomonas syringae pv. maculicola) and two fungal (Alternaria brassicae and Sclerotinia scletoriorum) Brassica pathogens. GSLs, GHPs, and methanolic leaf extracts inhibited the development of the pathogens tested compared to the control, and the effect was dose dependent. Furthermore, the biocide effects of the different compounds studied were dependent on the species and race of the pathogen. These results indicate that GSLs and their GHPs, as well as extracts of different Brassica species, have potential to inhibit pathogen growth and offer new opportunities to study the use of Brassica crops in biofumigation for the control of multiple diseases. PMID:25362058

  20. Nutritional evaluation of low-glucosinolate rapeseed meals obtained by various processes.

    Science.gov (United States)

    Mukherjee, K D; Mangold, H K; El Nockrashy, A S

    1979-01-01

    Defatted meals were prepared from two new varieties of rapeseed, the 'high-glucosinolate' variety, Brassica napus, Lesira, and the 'low-glucosinolate' variety, Brassica napus, Erglu, by each of the following processes: (1) defatting of the ground seed with hexane; (2) extraction of the myrosinase-deactivated ground seed with 70% aqueous acetone for the removal of glucosinolates followed by defatting with pure acetone, and (3) autolysis of the ground seed for the decomposition of glucosinolates followed by defatting and simultaneous removal of the decomposition products with hexane. The defatted meals obtained after extraction with aqueous acetone of autolysis contain very little glucosinolates and their degradation products as compared to those obtained by defatting with hexane only. The contents of available lysine and of phytates in the meals are, to some extent, affected by the treatment for the removal of glucosinolates. The rapeseed meals were fed at different levels to protein-depleted chicks and weanling rats. The animals fed low-glucosinolate meals prepared both from high-glucosinolate and low-glucosinolate varieties of rapeseed gave superior performance with regard to the feed conversion and protein efficiency ratio as compared to the animals fed the corresponding meals which were obtained simply by defatting the seeds with hexane. The levels of thyroxine (T4) and triiodothyronine (T3) in the serum of rats fed low-glucosinolate meals indicated normal function of the thyroid, whereas those in rats fed high-glucosinolate meals revealed hypothyroidism of the animals.

  1. Competition of rapeseed ( Brassica napus L.) cultivars with weeds ...

    African Journals Online (AJOL)

    One of the agronomic methods in weeds management is to recognize cultivars possessing high competitive ability with weeds and to recognize the effective characters in order to breed competitive cultivars in weeds sustainable management. Cultivar identification and discrimination has become an important issue in ...

  2. and Saccostomus campestris (Cricetomyinae) in relation to ...

    African Journals Online (AJOL)

    forestomach papillae supporting vast colonies of symbiotic bacteria that are not found in S. campestris. ... symbiotic bacteria attached to gastric papillae is to elevate alpha amylase activity and aid starch! glycogen ..... animals (Bauchop 1978) and in C. gambianus are known to ferment glucose (liberating alcohols), hydrolyse ...

  3. A Genome-Wide Association Study Reveals New Loci for Resistance to Clubroot Disease in Brassica napus

    Science.gov (United States)

    Li, Lixia; Luo, Yujie; Chen, Biyun; Xu, Kun; Zhang, Fugui; Li, Hao; Huang, Qian; Xiao, Xin; Zhang, Tianyao; Hu, Jihong; Li, Feng; Wu, Xiaoming

    2016-01-01

    Rapeseed (Brassica napus L.) is one of the most important oil crops in the world. However, the yield and quality of rapeseed were largely decreased by clubroot (Plasmodiophora brassicae Woronin). Therefore, it is of great importance for screening more resistant germplasms or genes and improving the resistance to P. brassicae in rapeseed breeding. In this study, a massive resistant identification for a natural global population was conducted in two environments with race/pathotype 4 of P. brassicae which was the most predominant in China, and a wide range of phenotypic variation was found in the population. In addition, a genome-wide association study of 472 accessions for clubroot resistance (CR) was performed with 60K Brassica Infinium SNP arrays for the first time. In total, nine QTLs were detected, seven of which were novel through integrative analysis. Furthermore, additive effects in genetic control of CR in rapeseed among the above loci were found. By bioinformatic analyses, the candidate genes of these loci were predicted, which indicated that TIR-NBS gene family might play an important role in CR. It is believable that the results presented in our study could provide valuable information for understanding the genetic mechanism and molecular regulation of CR. PMID:27746804

  4. A Genome-Wide Association Study Reveals New Loci for Resistance to Clubroot Disease in Brassica napus.

    Science.gov (United States)

    Li, Lixia; Luo, Yujie; Chen, Biyun; Xu, Kun; Zhang, Fugui; Li, Hao; Huang, Qian; Xiao, Xin; Zhang, Tianyao; Hu, Jihong; Li, Feng; Wu, Xiaoming

    2016-01-01

    Rapeseed (Brassica napus L.) is one of the most important oil crops in the world. However, the yield and quality of rapeseed were largely decreased by clubroot (Plasmodiophora brassicae Woronin). Therefore, it is of great importance for screening more resistant germplasms or genes and improving the resistance to P. brassicae in rapeseed breeding. In this study, a massive resistant identification for a natural global population was conducted in two environments with race/pathotype 4 of P. brassicae which was the most predominant in China, and a wide range of phenotypic variation was found in the population. In addition, a genome-wide association study of 472 accessions for clubroot resistance (CR) was performed with 60K Brassica Infinium SNP arrays for the first time. In total, nine QTLs were detected, seven of which were novel through integrative analysis. Furthermore, additive effects in genetic control of CR in rapeseed among the above loci were found. By bioinformatic analyses, the candidate genes of these loci were predicted, which indicated that TIR-NBS gene family might play an important role in CR. It is believable that the results presented in our study could provide valuable information for understanding the genetic mechanism and molecular regulation of CR.

  5. A genome-wide association study reveals new loci for resistance to clubroot disease in Brassica napus

    Directory of Open Access Journals (Sweden)

    Lixia Li

    2016-09-01

    Full Text Available Rapeseed (Brassica napus L. is one of the most important oil crops in the world. However, the yield and quality of rapeseed were largely decreased by clubroot (Plasmodiophora brassicae Woronin. Therefore, it is of great importance for screening more resistant germplasms or genes and improving the resistance to P. brassicae in rapeseed breeding. In this study, a massive resistant identification for a natural global population was conducted in two environments with race/pathotype 4 of P. brassicae which was the most predominant in China, and a wide range of phenotypic variation was found in the population. In addition, a genome-wide association study of 472 accessions for clubroot resistance (CR was performed with 60K Brassica Infinium SNP arrays for the first time. In total, 9 QTLs were detected, 7 of which were novel through integrative analysis. Furthermore, additive effects in genetic control of CR in rapeseed among the above loci were found. By bioinformatic analyses, the candidate genes of these loci were predicted, which indicated that TIR-NBS gene family might play an important role in CR. It is believable that the results presented in our study could provide valuable information for understanding the genetic mechanism and molecular regulation of CR.

  6. Enhanced phyto-extraction of cadmium and zinc using rapeseed

    Energy Technology Data Exchange (ETDEWEB)

    Ghani, M.; Slycken, S.V.; Meers, E.; Tack, F.M.G. [Laboratory of Analytical Chemistry and Applied Ecochemistry, Ghent University, Ghent (Belgium); Naz, F. [National Insect Museum, National Agricultural Research Centre, Islamabad (Pakistan); Ali, S. [Agriculture Department, University of Haripur, Haripur (Pakistan)

    2013-07-01

    In a green house pot experiment, the effects of three amendments, sulphur (S), ammonium sulphate ((NH{sub 4}){sub 2}SO{sub 4}) and ethylenediaminetetracetic acid (EDTA) were tested for phyto-extraction of Cd and Zn by rapeseed (Brassica napus L.). Elemental sulphur was applied as 20.00, 60.00, and 120.00 mg.kg{sup -1} soil. EDTA was tested at a dose of 585.00 mg.kg{sup -1} soil, and (NH{sub 4}){sub 2}SO{sub 4}) at a rate of 0.23 mg.kg{sup -1} soil. All treatments received a base fertilization (Hogland) before sowing. Plants were harvested after 51 days of growth and shoot dry matter and soil samples were analysed for metal contents. All amendments caused a significant increase in Cd and Zn contents in plant shoots of all treatments than control treatment. Further, EDTA was most effective for extraction metals concentrations in shoot biomass but the plants showed significant signs of toxicity and yield were severely depressed. The addition of sulfur favorably influenced plant biomass production. The fertilized ammonium sulfate treatment resulted in the highest phyto-extraction of Cd and Zn and the amounts of these metals accumulated in plant shoot exceeded by a factor of 4 and 3 respectively. Finally, Brassica napus could be used for soil remediation keeping its other uses which will make the contaminated site income generating source for the farmers. (authors)

  7. Genome-Wide Survey and Characterization of Fatty Acid Desaturase Gene Family in Brassica napus and Its Parental Species.

    Science.gov (United States)

    Xue, Yufei; Chen, Baojun; Wang, Rui; Win, Aung Naing; Li, Jiana; Chai, Yourong

    2018-02-01

    Rapeseed (Brassica napus) is an important oilseed crop worldwide, and fatty acid (FA) compositions determine the nutritional and economic value of its seed oil. Fatty acid desaturases (FADs) play a pivotal role in regulating FA compositions, but to date, no comprehensive genome-wide analysis of FAD gene family in rapeseed and its parent species has been reported. In this study, using homology searches, 84, 45, and 44 FAD genes were identified in rapeseed, Brassica rapa, and Brassica oleracea genomes, respectively. These FAD genes were unevenly located in 17 chromosomes and 2 scaffolds of rapeseed, 9 chromosomes and 1 scaffold of B. rapa, and all the chromosomes of B. oleracea. Phylogenetic analysis showed that the soluble and membrane-bound FADs in the three Brassica species were divided into four and six subfamilies, respectively. Generally, the soluble FADs contained two conserved histidine boxes, while three highly conserved histidine boxes were harbored in membrane-bound FADs. Exon-intron structure, intron phase, and motif composition and position were highly conserved in each FAD subfamily. Putative subcellular locations of FAD proteins in three Brassica species were consistent with those of corresponding known FADs. In total, 25 of simple sequence repeat (SSR) loci were found in FAD genes of the three Brassica species. Transcripts of selected FAD genes in the three species were examined in various organs/tissues or stress treatments from NCBI expressed sequence tag (EST) database. This study provides a critical molecular basis for quality improvement of rapeseed oil and facilitates our understanding of key roles of FAD genes in plant growth and development and stress response.

  8. Detecção, transmissão e efeito de Xanthomonas campestris pv. campestris na qualidade fisiológica de sementes de brócolis Detection, transmission and effect of Xanthomonas campestris pv. campestris in the physiological quality of broccoli seeds

    Directory of Open Access Journals (Sweden)

    Nilvanira Donizeti Tebaldi

    2007-12-01

    Full Text Available A detecção, a transmissão e o efeito de Xanthomonas campestris pv. campestris (Xcc na qualidade fisiológica de sementes de brócolis (Brassica oleracea var. italica foram avaliados, a partir de sementes obtidas de plantas ("Baron, Flórida, Hana Midori Sakata, Precoce Piracicaba de Verão, Ramoso Santana e Sabre" inoculadas com a bactéria, em condições de campo. Para a detecção do patógeno nas sementes foram utilizados os meios de cultura semi-seletivos: SX ágar, NSCAA e BSCAA; a taxa de transmissão da bactéria pelas sementes às plântulas foi avaliada usando semeadura em areia e meio de cultura contido em tubo de ensaio. Para a avaliação da qualidade fisiológica de sementes foram realizados o teste padrão de germinação e os testes de vigor: envelhecimento acelerado, índice de velocidade de emergência, crescimento de plântulas e massa seca. De acordo com os resultados, o meio de cultura semi-seletivo NSCAA foi mais eficaz para detectar Xcc em sementes de brócolis; não houve diferença significativa entre os genótipos na taxa de transmissão da bactéria pelas sementes e Xcc não afetou a germinação e o vigor das sementes.The detection, transmission and the effect of Xanthomomas campestris pv. campestris (Xcc in the physiological quality of broccoli seeds were evaluated. The seeds were obtained from inoculated field plants (`Baron', `Flórida', `Hana Midori Sakata', `Precoce Piracicaba de Verão', `Ramoso Santana' and `Sabre' genotypes with the bacterium. For the seed pathogen detection the semi-selective medium were used: starch for xanthomonads (SX agar, nutrient starch cycloheximide antibiotic agar (NSCAA and basal starch cycloheximide antibiotic agar (BSCAA; the bacteria seeds transmission percentage was evaluated using sand and test tube. The physiological seed quality was evaluated by the standard germination and vigor tests: the accelerated aging, speed of emergence, seedling growth and seedling dry weight. The

  9. Detecção, transmissão e efeito de Xanthomonas campestris pv. campestris na qualidade fisiológica de sementes de brócolis Detection, transmission and effect of Xanthomonas campestris pv. campestris in the physiological quality of broccoli seeds

    Directory of Open Access Journals (Sweden)

    Nilvanira Donizete Tebaldi

    2007-09-01

    Full Text Available A detecção, a transmissão e o efeito de Xanthomonas campestris pv. campestris (Xcc na qualidade fisiológica de sementes de brócolis (Brassica oleracea var. italica foram avaliadas, a partir de sementes obtidas de plantas ("Baron, Flórida, Hana Midori Sakata, Precoce Piracicaba de Verão, Ramoso Santana e Sabre" inoculadas com a bactéria, em condições de campo. Para a detecção do patógeno nas sementes foram utilizados os meios de cultura semi-seletivos: SX ágar, NSCAA e BSCAA; a taxa de transmissão da bactéria pelas sementes às plântulas foi avaliada usando semeadura em areia e meio de cultura contido em tubo de ensaio. Para a avaliação da qualidade fisiológica das sementes foram realizados o teste padrão de germinação e os testes de vigor: envelhecimento acelerado, índice de velocidade de emergência, crescimento das plântulas e massa seca. De acordo com os resultados, o meio de cultura semi-seletivo NSCAA foi mais eficaz para detectar Xcc em sementes de brócolis; não houve diferença significativa entre os genótipos na taxa de transmissão da bactéria pelas sementes e Xcc não afetou a germinação e o vigor das sementes.The detection, transmission and the effect of Xanthomomas campestris pv. campestris (Xcc in the physiological quality of broccoli seeds were evaluated. The seeds were obtained from inoculated field plants ('Baron', 'Flórida', 'Hana Midori Sakata', 'Precoce Piracicaba de Verão', 'Ramoso Santana' and 'Sabre' genotypes with the bacterium. For the seed pathogen detection the semi-selective medium were used: starch for xanthomonads (SX agar, nutrient starch cycloheximide antibiotic agar (NSCAA and basal starch cycloheximide antibiotic agar (BSCAA; the bacteria seeds transmission percentage was evaluated using sand and test tube. The physiological seed quality was evaluated by the standard germination and vigor tests: the accelerated aging, speed of emergence, seedling growth and seedling dry weight

  10. Identification of Xanthomonas campestris pv. campestris galactose utilization genes from transcriptome data.

    Science.gov (United States)

    Serrania, Javier; Vorhölter, Frank-Jörg; Niehaus, Karsten; Pühler, Alfred; Becker, Anke

    2008-06-30

    A 70 mer oligonucleotide microarray was constructed to analyze genome-wide expression profiles of Xanthomonas campestris pv. campestris B100, a plant-pathogenic bacterium that is industrially employed to produce the exopolysaccharide xanthan gum which has many applications as a stabilizing, thickening, gelling, and emulsifying agent in food, pharmaceutical, and cosmetic industries. As an application example, global changes of gene expression were monitored during growth of X. campestris pv. campestris B100 on two different carbon sources. Exponential growing bacterial cultures were incubated either for 1h or permanently in minimal medium supplemented with 1% galactose in comparison to growth in minimal medium supplemented with 1% glucose. Six genes were identified that were significantly increased in gene expression under both growth conditions. These genes were located in three distinguished chromosomal regions in operon-like gene clusters. Genes from these clusters encode secreted glycosidases, which were predicted to be specific for galactose-containing carbohydrates, as well as transport proteins probably located in the outer and inner cell membrane. Finally genes from one cluster code for cytoplasmic enzymes of a metabolic pathway specific for the breakdown of galactose to intermediates of glycolysis.

  11. Natural Genetic Variation of Xanthomonas campestris pv. campestris Pathogenicity on Arabidopsis Revealed by Association and Reverse Genetics

    Science.gov (United States)

    Guy, Endrick; Genissel, Anne; Hajri, Ahmed; Chabannes, Matthieu; David, Perrine; Carrere, Sébastien; Lautier, Martine; Roux, Brice; Boureau, Tristan; Arlat, Matthieu; Poussier, Stéphane; Noël, Laurent D.

    2013-01-01

    ABSTRACT The pathogenic bacterium Xanthomonas campestris pv. campestris, the causal agent of black rot of Brassicaceae, manipulates the physiology and the innate immunity of its hosts. Association genetic and reverse-genetic analyses of a world panel of 45 X. campestris pv. campestris strains were used to gain understanding of the genetic basis of the bacterium’s pathogenicity to Arabidopsis thaliana. We found that the compositions of the minimal predicted type III secretome varied extensively, with 18 to 28 proteins per strain. There were clear differences in aggressiveness of those X. campestris pv. campestris strains on two Arabidopsis natural accessions. We identified 3 effector genes (xopAC, xopJ5, and xopAL2) and 67 amplified fragment length polymorphism (AFLP) markers that were associated with variations in disease symptoms. The nature and distribution of the AFLP markers remain to be determined, but we observed a low linkage disequilibrium level between predicted effectors and other significant markers, suggesting that additional genetic factors make a meaningful contribution to pathogenicity. Mutagenesis of type III effectors in X. campestris pv. campestris confirmed that xopAC functions as both a virulence and an avirulence gene in Arabidopsis and that xopAM functions as a second avirulence gene on plants of the Col-0 ecotype. However, we did not detect the effect of any other effector in the X. campestris pv. campestris 8004 strain, likely due to other genetic background effects. These results highlight the complex genetic basis of pathogenicity at the pathovar level and encourage us to challenge the agronomical relevance of some virulence determinants identified solely in model strains. PMID:23736288

  12. Biological traits and Life table parameters A and B biotype of Bemisia tabaci (Genn. on cotton and rapeseed

    Directory of Open Access Journals (Sweden)

    Mohammad Amin Samih

    2014-06-01

    Full Text Available The aim of this work was to construct life table of Bemisia tabaci (Gen. A and B (silverleaf whitefly B. argentifolii Bellows and Perring biotype (Hem.: Aleyrodidae on two host plants; cotton, (Gossypium hirsutum L. and rapeseed, (Brassica napus L.. Experiments were conducted in a growth chamber under 24 ± 2ºC, 55±3% RH and 16:8 (L:D h photoperiod on caged plants of cotton G. hirsutum L. (Varamin 76 variety and rapeseed B. napus L. (global variety. The intrinsic rate of natural increase (r m, net reproductive rate (R0 and mean generation time (T for B. tabaci A biotype was 0.1010 females per female per day, 18.4075 females per female and 30.079 day (d on cotton; 0.1286, 30.6760 and 26.77 d on rapeseed; and for B biotype (B. argentifolii those above respective parameters averaged 0.1033, 27.8426 and 32.74 d on cotton and 0.1750, 40.75 and 21.27 d on rapeseed. The total survival of A and B biotype from the egg to adult on cotton was 22.08 and 22.25, respectively. The results showed significant differences between the two biotype reared on either host plant for gross reproductive rate (GRR, net reproductive rate (R0 or NRR, intrinsic rates of increase (r m, finite rate of increase (λ, doubling time (DT and mean generation times (Tc. To obtain a better understanding of the biology of these biotypes, Stable age distribution (Cx and some other aspects of life history related to their hosts were also studied. Based upon the results, both biotypes showed a greater reproduction capacity on rapeseed than on cotton. Thus, rapeseed was more suitable host than cotton for two biotypes and this was an important factor in host plant selection for optimizing the control strategies of these major pests.

  13. Jasna: A new winter rapeseed cultivar

    Directory of Open Access Journals (Sweden)

    Marjanović-Jeromela Ana

    2009-01-01

    Full Text Available The program of winter rapeseed breeding at Institute of Field and Vegetable Crops covers the development of winter and spring rapeseed cultivars and hybrids. Winter rapeseed cultivars are selected for high and stabile grain and oil yield, good oil quality, low erucic acid and glucosinolate content (type 00 and tolerance to stresses caused by abiotic and biotic factors. This paper reviews agronomic characteristics and grain and oil quality of a new cultivar of winter rapeseed Jasna. In the trials of the Serbian Commission for new cultivars registration, cultivar Jasna had higher grain yield then standard, in the three locations and two years. In average the yield was 4566 kg/ha. Oil content is at the level of the standard. The erucic acid content and glucosinolate content are lower then that in the standard and that are positive characteristics. .

  14. Erucic acid rapeseed: 1. Prospects of improvements

    National Research Council Canada - National Science Library

    Sanyal, Anushree; Pinochet, Xavier; Merrien, André; Laustriat, Marie; Decocq, Guillaume; Fine, Frédéric

    2015-01-01

    In the current context of boosting production of high erucic acid rapeseed, because of the wide range of its industrial applications, this literature review is designed to provide a general overview...

  15. A homolog of the RPS2 disease resistance gene is constitutively expressed in Brassica oleracea

    Directory of Open Access Journals (Sweden)

    Malvas Celia C.

    2003-01-01

    Full Text Available In this study, we identified disease resistance gene homologs in Brassica oleracea and assessed their expression in lines resistant and susceptible to Xanthomonas campestris pv. campestris (Xcc. Two DNA fragments of approximately 2.5 kb (BI-16/RPS2 and Lc201/RPS2 were amplified by PCR from two Brassica lines using primers based on an RPS2 homologous sequence previously described in the Brassica oleracea ecotype B117. The sequences of these fragments shared high similarity (95-98% with RPS2 homologs from various Brassica species. The digestion of these fragments with restriction enzymes revealed polymorphisms at the Xba I restriction sites. The length polymorphisms were used as a co-dominant marker in an F2 population developed to segregate for resistance to Xcc, the causal agent of black rot. Linkage analysis showed no significant association between the marker and quantitative trait loci for black rot. RT-PCR with specific primers yielded an expected 453 bp fragment that corresponded to the RPS2 homologs in both resistant and susceptible lines inoculated with the pathogen, as well as in non-inoculated control plants. These results suggest that these homologs are constitutively expressed in B. oleracea.

  16. Genetic Construction of Lactose-Utilizing Xanthomonas campestris

    OpenAIRE

    Walsh, Patricia M.; Michael J Haas; Somkuti, George A.

    1984-01-01

    Xanthomonas campestris, the producer of xanthan gum, possesses a β-galactosidase of very low specific activity. Plasmid pGC9114 (RP1::Tn951), generated by the transposition of the lactose transposon Tn951 to RP1, was conjugally transferred into XN1, a nalidixic acid-resistant derivative of X. campestris NRRL B-1459S-4L. Transfer occurred on membrane filters and in broth. The β-galactosidase gene of Tn951 was expressed in X. campestris. The specific activity of β-galactosidase in transconjugan...

  17. Brassica napus L.

    African Journals Online (AJOL)

    STORAGESEVER

    2009-10-05

    Oct 5, 2009 ... ... genetic diversity, RAPD, cluster analysis. INTRODUCTION. Rapeseed is the second most important oil crop in the world after soybean (Hasan et al., 2006). Besides that, rapeseed is also very important as a key crop for the raw material supply in the biodiesel (green diesel) industry. (Marjanovic-Jeromela ...

  18. In Vitro Digestibility of Rapeseed and Bovine Whey Protein Mixtures.

    Science.gov (United States)

    Joehnke, Marcel Skejovic; Rehder, Alina; Sørensen, Susanne; Bjergegaard, Charlotte; Sørensen, Jens Christian; Markedal, Keld Ejdrup

    2018-01-24

    Partial replacement of animal protein sources with plant proteins is highly relevant for the food industry, but potential effects on protein digestibility need to be established. In this study, the in vitro protein digestibility (IVPD) of four protein sources and their mixtures (50:50 w/w ratio) was investigated using a transient pepsin hydrolysis (1 h) followed by pancreatin (1 h). The protein sources consisted of napin-rich rapeseed (Brassica napus L.) protein concentrates (RPCs; RP1, RP2) prepared in pilot scale and major bovine whey proteins (WPs; α-LA, alpha-lactalbumin; β-LG, beta-lactoglobulin). IVPD of individual protein sources was higher for WPs compared to RPCs. The RP2/β-LG mixture resulted in an unexpected high IVPD equivalent to β-LG protein alone. Protein mixtures containing RP1 showed a new IVPD response type due to the negative influence of a high trypsin inhibitor activity (TIA) level. Improved IVPD of RP1 alone and in protein mixtures was obtained by lowering the TIA level using dithiothreitol (DTT). These results showed that napin-rich protein products prepared by appropriate processing can be combined with specific WPs in mixtures to improve the IVPD.

  19. The compact genome of the plant pathogen Plasmodiophora brassicae is adapted to intracellular interactions with host Brassica spp.

    Science.gov (United States)

    Rolfe, Stephen A; Strelkov, Stephen E; Links, Matthew G; Clarke, Wayne E; Robinson, Stephen J; Djavaheri, Mohammad; Malinowski, Robert; Haddadi, Parham; Kagale, Sateesh; Parkin, Isobel A P; Taheri, Ali; Borhan, M Hossein

    2016-03-31

    The protist Plasmodiophora brassicae is a soil-borne pathogen of cruciferous species and the causal agent of clubroot disease of Brassicas including agriculturally important crops such as canola/rapeseed (Brassica napus). P. brassicae has remained an enigmatic plant pathogen and is a rare example of an obligate biotroph that resides entirely inside the host plant cell. The pathogen is the cause of severe yield losses and can render infested fields unsuitable for Brassica crop growth due to the persistence of resting spores in the soil for up to 20 years. To provide insight into the biology of the pathogen and its interaction with its primary host B. napus, we produced a draft genome of P. brassicae pathotypes 3 and 6 (Pb3 and Pb6) that differ in their host range. Pb3 is highly virulent on B. napus (but also infects other Brassica species) while Pb6 infects only vegetable Brassica crops. Both the Pb3 and Pb6 genomes are highly compact, each with a total size of 24.2 Mb, and contain less than 2 % repetitive DNA. Clustering of genome-wide single nucleotide polymorphisms (SNP) of Pb3, Pb6 and three additional re-sequenced pathotypes (Pb2, Pb5 and Pb8) shows a high degree of correlation of cluster grouping with host range. The Pb3 genome features significant reduction of intergenic space with multiple examples of overlapping untranslated regions (UTRs). Dependency on the host for essential nutrients is evident from the loss of genes for the biosynthesis of thiamine and some amino acids and the presence of a wide range of transport proteins, including some unique to P. brassicae. The annotated genes of Pb3 include those with a potential role in the regulation of the plant growth hormones cytokinin and auxin. The expression profile of Pb3 genes, including putative effectors, during infection and their potential role in manipulation of host defence is discussed. The P. brassicae genome sequence reveals a compact genome, a dependency of the pathogen on its host for some

  20. Genome-wide investigation of genetic changes during modern breeding of Brassica napus.

    Science.gov (United States)

    Wang, Nian; Li, Feng; Chen, Biyun; Xu, Kun; Yan, Guixin; Qiao, Jiangwei; Li, Jun; Gao, Guizhen; Bancroft, Ian; Meng, Jingling; King, Graham J; Wu, Xiaoming

    2014-08-01

    Considerable genome variation had been incorporated within rapeseed breeding programs over past decades. In past decades, there have been substantial changes in phenotypic properties of rapeseed as a result of extensive breeding effort. Uncovering the underlying patterns of allelic variation in the context of genome organisation would provide knowledge to guide future genetic improvement. We assessed genome-wide genetic changes, including population structure, genetic relatedness, the extent of linkage disequilibrium, nucleotide diversity and genetic differentiation based on F ST outlier detection, for a panel of 472 Brassica napus inbred accessions using a 60 k Brassica Infinium® SNP array. We found genetic diversity varied in different sub-groups. Moreover, the genetic diversity increased from 1950 to 1980 and then remained at a similar level in China and Europe. We also found ~6-10 % genomic regions revealed high F ST values. Some QTLs previously associated with important agronomic traits overlapped with these regions. Overall, the B. napus C genome was found to have more high F ST signals than the A genome, and we concluded that the C genome may contribute more valuable alleles to generate elite traits. The results of this study indicate that considerable genome variation had been incorporated within rapeseed breeding programs over past decades. These results also contribute to understanding the impact of rapeseed improvement on available genome variation and the potential for dissecting complex agronomic traits.

  1. Genetic Diversity and Pathogenic Variation of Common Blight Bacteria (Xanthomonas campestris pv. phaseoli and X. campestris pv. phaseoli var. fuscans) Suggests Pathogen Coevolution with the Common Bean.

    Science.gov (United States)

    Mkandawire, Alexander B C; Mabagala, Robert B; Guzmán, Pablo; Gepts, Paul; Gilbertson, Robert L

    2004-06-01

    ABSTRACT Common bacterial blight (CBB), caused by Xanthomonas campestris pv. phaseoli and X. campestris pv. phaseoli var. fuscans, is one of the most important diseases of common bean (Phaseolus vulgaris) in East Africa and other bean-growing regions. Xanthomonad-like bacteria associated with CBB in Malawi and Tanzania, East Africa, and in Wisconsin, U.S., were characterized based on brown pigment production, pathogenicity on common bean, detection with an X. campestris pv. phaseoli- or X. campestris pv. phaseoli var. fuscans-specific PCR primer pair, and repetitive element polymerase chain reaction (rep-PCR) and restriction fragment length polymorphism (RFLP) analyses. The common bean gene pool (Andean or Middle American) from which each strain was isolated also was determined. In Malawi, X. campestris pv. phaseoli and X. campestris pv. phaseoli var. fuscans were isolated predominantly from Andean or Middle American beans, respectively. In Tanzania, X. campestris pv. phaseoli var. fuscans was most commonly isolated, irrespective of gene pool; whereas, in Wisconsin, only X. campestris pv. phaseoli was isolated from Andean red kidney beans. Three rep-PCR fingerprints were obtained for X. campestris pv. phaseoli strains; two were unique to East African strains, whereas the other was associated with strains collected from all other (mostly New World) locations. RFLP analyses with repetitive DNA probes revealed the same genetic diversity among X. campestris pv. phaseoli strains as did rep-PCR. These probes hybridized with only one or two fragments in the East African strains, but with multiple fragments in the other X. campestris pv. phaseoli strains. East African X. campestris pv. phaseoli strains were highly pathogenic on Andean beans, but were significantly less pathogenic on Middle American beans. In contrast, X. campestris pv. phaseoli strains from New World locations were highly pathogenic on beans of both gene pools. Together, these results indicate the

  2. Effect of Rapeseed Oil on Effective Protein Degradability and Intestinal Protein Digestibility of Oat, Rapeseed Meal and Dried Sugarbeet Pulp

    National Research Council Canada - National Science Library

    Potkanski, A; Nowak, W

    2000-01-01

    Potkanski, A. and Nowak, W. 2000. Effect of rapeseed oil on effective protein degradability and intestinal protein digestibility of oat, rapeseed meal and dried sugarbeet pulp. J. Appl. Anim. Res., 18: 81-89...

  3. Economics of rapeseed production in Serbia

    Directory of Open Access Journals (Sweden)

    Popović Rade

    2010-01-01

    Full Text Available Rapeseed production in Serbia is characterized by an increasing trend, as a result of positive price signals from international market. Since previous researches on economics of rapeseed production were aimed at non-family farms, focus in this paper is on the same aspects on family farms from lowland production region. Results are analyzed in view of micro and macro-economic trends. Increase of world demand for oil crops, as a result of increasing production of renewable fuels and food needs, causes a trend of higher prices, which will probably remain in the following period. Due to this, opportunities are made for Serbian farmers in lowland production region to increase agriculture area under rapeseed. .

  4. Morphological, photosynthetic and physiological responses of rapeseed leaf to different combinations of red and blue lights at the rosette stage

    Directory of Open Access Journals (Sweden)

    Chang Shengxin

    2016-08-01

    Full Text Available Rapeseed (Brassica napus L. is sensitive to light quality. The factory production of rapeseed seedlings for vegetable use and for transplanting in the field requires an investigation of the responses of rapeseed to light quality. This study evaluated the responses of the leaf of rapeseed (cv. ‘Zhongshuang 11’ to different ratios of red-photonflux (RPF and blue-photonflux (BPF from light emitting diodes (LEDs. The treatments were set as monochromatic lights, including 100R:0B% and 0R:100B%, and compound lights (CLs, including 75R:25B%, 50R:50B% and 25R:75B%. The total photonflux in all of the treatments was set as 550 μmolm-2s-1. With an increase of BPF, the rapeseed leaves changed from wrinkled blades and down-rolled margins to flat blades and slightly up-rolled margins, and the compact degree of palisade tissue increased. One layer of the cells of palisade tissue was present under 100R:0B%, whereas two layers were present under the other treatments. Compared to 100R:0B%, 0R:100B% enhanced the indexes of leaf thickness, leaf mass per area (LMA, stomatal density, chlorophyll (Chl content per weight and photosynthetic capacity (Pmax, and the CLs with high BPF ratios enhanced these indexes. However, the 100R:0B% and CLs with high RPF ratios enhanced the net photosynthetic rate (Pn. The leaves under the CLs showed growth vigor, whereas the leaves under 100R:0B% or 0R:100B% were stressed with a low Fv/Fm (photosynthetic maximum quantum yield and a high content of O2.- and H2O2. The top second leaves under 100R:0B% or 0R:100B% showed stress resistance responses with a high activity of antioxidase, but the top third leaves showed irreversible damage and inactivity of antioxidase. Our results showed that the rapeseed leaves grown under 0R:100B% or CLs with a high BPF ratio showed higher ability to utilize high photonflux, while the leaves grown under 100R:0B% or CLs with a low BPF ratio showed higher efficiency in utilizing low photonflux. Under

  5. Morphological, Photosynthetic, and Physiological Responses of Rapeseed Leaf to Different Combinations of Red and Blue Lights at the Rosette Stage.

    Science.gov (United States)

    Shengxin, Chang; Chunxia, Li; Xuyang, Yao; Song, Chen; Xuelei, Jiao; Xiaoying, Liu; Zhigang, Xu; Rongzhan, Guan

    2016-01-01

    Rapeseed (Brassica napus L.) is sensitive to light quality. The factory production of rapeseed seedlings for vegetable use and for transplanting in the field requires an investigation of the responses of rapeseed to light quality. This study evaluated the responses of the leaf of rapeseed (cv. "Zhongshuang 11") to different ratios of red-photonflux (RPF) and blue-photonflux (BPF) from light emitting diodes (LEDs). The treatments were set as monochromatic lights, including 100R:0B% and 0R:100B%, and compound lights (CLs), including 75R:25B%, 50R:50B%, and 25R:75B%. The total photonflux in all of the treatments was set as 550 μmolm(-2)s(-1). With an increase of BPF, the rapeseed leaves changed from wrinkled blades and down-rolled margins to flat blades and slightly up-rolled margins, and the compact degree of palisade tissue increased. One layer of the cells of palisade tissue was present under 100R:0B%, whereas two layers were present under the other treatments. Compared to 100R:0B%, 0R:100B% enhanced the indexes of leaf thickness, leaf mass per area (LMA), stomatal density, chlorophyll (Chl) content per weight and photosynthetic capacity (P max), and the CLs with high BPF ratios enhanced these indexes. However, the 100R:0B% and CLs with high RPF ratios enhanced the net photosynthetic rate (P n). The leaves under the CLs showed growth vigor, whereas the leaves under 100R:0B% or 0R:100B% were stressed with a low F v/F m (photosynthetic maximum quantum yield) and a high content of [Formula: see text] and H2O2. The top second leaves under 100R:0B% or 0R:100B% showed stress resistance responses with a high activity of antioxidase, but the top third leaves showed irreversible damage and inactivity of antioxidase. Our results showed that the rapeseed leaves grown under 0R:100B% or CLs with a high BPF ratio showed higher ability to utilize high photonflux, while the leaves grown under 100R:0B% or CLs with a low BPF ratio showed higher efficiency in utilizing low

  6. Establishment of an inducing medium for type III effector secretion in Xanthomonas campestris pv. campestris

    Directory of Open Access Journals (Sweden)

    Guo-Feng Jiang

    2013-09-01

    Full Text Available It is well known that the type III secretion system (T3SS and type III (T3 effectors are essential for the pathogenicity of most bacterial phytopathogens and that the expression of T3SS and T3 effectors is suppressed in rich media but induced in minimal media and plants. To facilitate in-depth studies on T3SS and T3 effectors, it is crucial to establish a medium for T3 effector expression and secretion. Xanthomonas campestris pv. campestris (Xcc is a model bacterium for studying plant-pathogen interactions. To date no medium for Xcc T3 effector secretion has been defined. Here, we compared four minimal media (MME, MMX, XVM2, and XOM2 which are reported for T3 expression induction in Xanthomonas spp. and found that MME is most efficient for expression and secretion of Xcc T3 effectors. By optimization of carbon and nitrogen sources and pH value based on MME, we established XCM1 medium, which is about 3 times stronger than MME for Xcc T3 effectors secretion. We further optimized the concentration of phosphate, calcium, and magnesium in XCM1 and found that XCM1 with a lower concentration of magnesium (renamed as XCM2 is about 10 times as efficient as XCM1 (meanwhile, about 30 times stronger than MME. Thus, we established an inducing medium XCM2 which is preferred for T3 effector secretion in Xcc.

  7. Chromosome map of Xanthomonas campestris pv. campestris 17 with locations of genes involved in xanthan gum synthesis and yellow pigmentation.

    Science.gov (United States)

    Tseng, Y H; Choy, K T; Hung, C H; Lin, N T; Liu, J Y; Lou, C H; Yang, B Y; Wen, F S; Weng, S F; Wu, J R

    1999-01-01

    No plasmid was detected in Xanthomonas campestris pv. campestris 17, a strain of the causative agent of black rot in cruciferous plants isolated in Taiwan. Its chromosome was cut by PacI, PmeI, and SwaI into five, two, and six fragments, respectively, and a size of 4.8 Mb was estimated by summing the fragment lengths in these digests. Based on the data obtained from partial digestion and Southern hybridization using probes common to pairs of the overlapping fragments or prepared from linking fragments, a circular physical map bearing the PacI, PmeI, and SwaI sites was constructed for the X. campestris pv. campestris 17 chromosome. Locations of eight eps loci involved in exopolysaccharide (xanthan gum) synthesis, two rrn operons each possessing an unique I-CeuI site, one pig cluster required for yellow pigmentation, and nine auxotrophic markers were determined, using mutants isolated by mutagenesis with Tn5(pfm)CmKm. This transposon contains a polylinker with sites for several rare-cutting restriction endonucleases located between the chloramphenicol resistance and kanamycin resistance (Kmr) genes, which upon insertion introduced additional sites into the chromosome. The recA and tdh genes, with known sequences, were mapped by tagging with the polylinker-Kmr segment from Tn5(pfm)CmKm. This is the first map for X. campestris and would be useful for genetic studies of this and related Xanthomonas species.

  8. Chromosome Map of Xanthomonas campestris pv. campestris 17 with Locations of Genes Involved in Xanthan Gum Synthesis and Yellow Pigmentation

    Science.gov (United States)

    Tseng, Yi-Hsiung; Choy, Ka-Tim; Hung, Chih-Hsin; Lin, Nien-Tsung; Liu, Jane-Yu; Lou, Chih-Hong; Yang, Bih-Ying; Wen, Fu-Shyan; Weng, Shu-Fen; Wu, Jung-Rung

    1999-01-01

    No plasmid was detected in Xanthomonas campestris pv. campestris 17, a strain of the causative agent of black rot in cruciferous plants isolated in Taiwan. Its chromosome was cut by PacI, PmeI, and SwaI into five, two, and six fragments, respectively, and a size of 4.8 Mb was estimated by summing the fragment lengths in these digests. Based on the data obtained from partial digestion and Southern hybridization using probes common to pairs of the overlapping fragments or prepared from linking fragments, a circular physical map bearing the PacI, PmeI, and SwaI sites was constructed for the X. campestris pv. campestris 17 chromosome. Locations of eight eps loci involved in exopolysaccharide (xanthan gum) synthesis, two rrn operons each possessing an unique I-CeuI site, one pig cluster required for yellow pigmentation, and nine auxotrophic markers were determined, using mutants isolated by mutagenesis with Tn5(pfm)CmKm. This transposon contains a polylinker with sites for several rare-cutting restriction endonucleases located between the chloramphenicol resistance and kanamycin resistance (Kmr) genes, which upon insertion introduced additional sites into the chromosome. The recA and tdh genes, with known sequences, were mapped by tagging with the polylinker-Kmr segment from Tn5(pfm)CmKm. This is the first map for X. campestris and would be useful for genetic studies of this and related Xanthomonas species. PMID:9864320

  9. Genetic Construction of Lactose-Utilizing Xanthomonas campestris.

    Science.gov (United States)

    Walsh, P M; Haas, M J; Somkuti, G A

    1984-02-01

    Xanthomonas campestris, the producer of xanthan gum, possesses a beta-galactosidase of very low specific activity. Plasmid pGC9114 (RP1::Tn951), generated by the transposition of the lactose transposon Tn951 to RP1, was conjugally transferred into XN1, a nalidixic acid-resistant derivative of X. campestris NRRL B-1459S-4L. Transfer occurred on membrane filters and in broth. The beta-galactosidase gene of Tn951 was expressed in X. campestris. The specific activity of beta-galactosidase in transconjugants was over 200-fold higher than that in XN1, and transconjugants grew as well in lactose-based media as in glucose-based media. The lactose-utilizing transconjugants could potentially be used to produce xanthan gum from cheese whey.

  10. Short communication: Evaluation of a model for predicting Avena fatua and Descurainia sophia seed emergence in winter rapeseed

    Directory of Open Access Journals (Sweden)

    Mohammad A. Aboutalebian

    2017-07-01

    Full Text Available Avena fatua and Descurainia sophia are two important annual weeds throughout winter rapeseed (Brassica napus L. production systems in the semiarid region of Iran. Timely and more accurate control of both species may be developed if there is a better understanding of its emergence patterns. Non-linear regression techniques are usually unable to accurately predict field emergence under such environmental conditions. The objectives of this research were to evaluate the emergence patterns of A. fatua and D. sophia and determine if emergence could be predicted using cumulative soil thermal time in degree days (CTT. In the present work, cumulative seedling emergence from a winter rapeseed field during 3 years data set was fitted to cumulative soil CTT using Weibull and Gompertz functions. The Weibull model provided a better fit, based on coefficient of determination (R2sqr, root mean square of error (RMSE and Akaike index (AICd, compared to the Gompertz model between 2013 and 2016 seasons for both species. Maximum emergence of A. fatua occured 70-119 days after sowing or after equals 329-426 °Cd, while in D. sophia it occurred 119-134 days after sowing rapeseed equals 373-470 °Cd. Both models can aid in the future study of A. fatua and D. sophia emergence and assist growers and agricultural professionals with planning timely and more accurate A. fatua and D. sophia control.

  11. Evaluation of the Use of Spring Rapeseed in Phytoremediation of Soils Contaminated with Trace Elements and Their Effect on Yield Parameters

    Directory of Open Access Journals (Sweden)

    Szulc Piotr Mirosław

    2014-12-01

    Full Text Available The experimental material was made up by the plant organs of Brassica napus L. from a pot experiment during one vegetation period. There was investigated the effect of relatively high concentration of zinc, copper, lead and cadmium in soil on the rapeseed yield, the content of protein and oil in seeds. The impact of metals was defined based on the content of selected fatty acids in oil extracted from seeds. The highest contents of zinc and copper were found in leaves, lead - in roots and cadmium - in stems. The biological concentration factor values were respectively calculated for all the rapeseed organs. For Cu and Pb the values of biological concentration factor were low and very low for all the plant organs. The doses of Zn (300 mg × kg-1, 600 mg × kg-1 and Cu (80 mg × kg-1, 160 mg × kg-1 applied in the pot experiment resulted in the translocation of metals from the roots to the leaves. The doses of lead (400 mg × kg-1, 1600 mg × kg-1 did not trigger any translocation of that metal from the roots to the above-ground rapeseed plant parts, however, after the application of the cadmium doses (2 mg × kg-1, 6 mg × kg-1, there was recorded a clear translocation of Cd to the rapeseed stems and the leaves. A relatively high content of zinc, copper, lead and cadmium in soil had a significant effect neither on the yield parameters and nor on the qualitative characters of the rapeseed seed. Neither did they affect the content of protein, fat and fatty acids in seed-extracted oil. The results of the pot experiment suggest that spring rapeseed is suitable for the phytoremediation of moderately heavy-metalcontaminated soils.

  12. The poor digestibility of rapeseed protein is balanced by its very high metabolic utilization in humans.

    Science.gov (United States)

    Bos, Cécile; Airinei, Gheorghe; Mariotti, François; Benamouzig, Robert; Bérot, Serge; Evrard, Jacques; Fénart, Evelyne; Tomé, Daniel; Gaudichon, Claire

    2007-03-01

    Rapeseed protein (RP, Brassica napus) is used in only animal feed despite its high nutritional potential for human nutrition. We sought to assess the nutritional quality of rapeseed by measuring its real ileal digestibility (RID) and net postprandial protein utilization (NPPU) in humans fed (15)N-RP. Volunteers equipped with an intestinal tube at the jejunal (n = 5) or ileal level (n = 7) ingested a mixed meal containing 27.3 g (15)N-RP and a total energy content of 700 kcal (2.93 MJ). Dietary N kinetics was quantified in intestinal fluid, urine, and blood sampled at regular intervals during the postprandial period. The RID of RP was 84.0 +/- 8.8%. Dietary N at the ileal level was mostly in the form of undigested protein from both 12S and 2S rapeseed fractions. Aminoacidemia was not significantly increased by meal ingestion. The postprandial distribution of dietary N was 5.4 +/- 1.8% in urinary urea and ammonia, 8.2 +/- 3.4% in body urea, and 7.7 +/- 2.0% in plasma protein 8 h after the meal. The NPPU of RP amounted to 70.5 +/- 9.6% and the postprandial biological value (PBV) was high at 83.8 +/- 4.6%. RP has a low RID in humans compared with other plant proteins but also exhibits a very low deamination rate. Thus, the PBV of RP is excellent in humans, being as high as that of milk protein. We conclude that RP has a high nutritional potential for human nutrition.

  13. BnWRI1 coordinates fatty acid biosynthesis and photosynthesis pathways during oil accumulation in rapeseed.

    Science.gov (United States)

    Wu, Xue-Long; Liu, Zhi-Hong; Hu, Zhang-Hua; Huang, Rui-Zhi

    2014-06-01

    Photosynthesis in "green" seeds, such as rapeseed, soybean, and Arabidopsis, plays a substantial role in the improved efficiency of oil accumulation. However, the molecular mechanism underpinning the coordinated expression of fatty acid (FA) biosynthesis- and photosynthesis-related genes in such developing seeds remains to be elucidated. Here, we found that seed-specific overexpression of BnWRI1, a WRI1 homolog from rapeseed (Brassica napus cv. ZGY2), results in enhanced chlorophyll content in developing seeds and increased oil content and seed mass in matured seeds. BnWRI1 was co-expressed with BnBCCP and BnCAB, two marker genes of FA biosynthesis and photosynthesis during seed development, respectively. Overexpression of BnWRI1 increased expression of both marker genes. Further, the nuclear-localized BnWRI1 protein was found to act as a transcription activator. It could bind to the GT1-element and/or GCC-box, which are widespread in the upstream regions of genes involved in FA biosynthesis and photosynthesis pathways. Accordingly, BnWRI1 could interact with promoters of BCCP2 and LHB1B2 in vivo. These results suggested that BnWRI1 may coordinate FA biosynthesis and photosynthesis pathways in developing seeds via directly stimulating expression of GT1-element and/or GCC-box containing genes. © 2014 Institute of Botany, Chinese Academy of Sciences.

  14. Significant reductions in oil quality and lipid content of oilseed rape (Brassica napus L.) under climate change

    DEFF Research Database (Denmark)

    Namazkar, Shahla; Egsgaard, Helge; Frenck, Georg

    Despite of the potential importance to food and bioenergy purposes effects from climate change on plant oil quality have hardly been characterized. Worldwide Brassica napus, rapeseed or oilseed rape, is the second largest source of vegetable oil and the predominant oil crop in Europe. We found...... significant changes in oil quality and quantity of cultivars of oilseed rape grown in five future climate scenarios with elevated [CO2], [O3], temperature and combinations hereof (~RCP8.5, IPCC 2013)....

  15. Sensitive and specific detection of Xanthomonas campestris pv campestris by PCR using species-specific primers based on hrpF gene sequences.

    Science.gov (United States)

    Park, Young Jin; Lee, Byoung Moo; Ho-Hahn, Jang; Lee, Gil Bok; Park, Dong Suk

    2004-01-01

    A sensitive and specific assay was developed to detect bacterial black rot of crucifers caused by Xanthomonas campestris pv. campestris (X. c. pv. campestris), in cabbage seed and plant. Primers XCF and XCR from hrpF homologous to nolX, host recognition protein, were used to amplify a 525 bp DNA fragment. PCR technique was applied to detect the pathogen in naturally infected seed and plant of cabbage. The PCR product was only produced from X. c. pv. campestris among 40 isolates of Xanthomonas strains, Escherichia coli (O157:H7), Pectobacterium carotovorum subsp. carotovorum, and other reference bacteria.

  16. Chromosome Map of Xanthomonas campestris pv. campestris 17 with Locations of Genes Involved in Xanthan Gum Synthesis and Yellow Pigmentation

    OpenAIRE

    Tseng, Yi-Hsiung; Choy, Ka-Tim; Hung, Chih-Hsin; Lin, Nien-Tsung; Liu, Jane-Yu; Lou, Chih-Hong; Yang, Bih-Ying; Wen, Fu-Shyan; Weng, Shu-Fen; Wu, Jung-Rung

    1999-01-01

    No plasmid was detected in Xanthomonas campestris pv. campestris 17, a strain of the causative agent of black rot in cruciferous plants isolated in Taiwan. Its chromosome was cut by PacI, PmeI, and SwaI into five, two, and six fragments, respectively, and a size of 4.8 Mb was estimated by summing the fragment lengths in these digests. Based on the data obtained from partial digestion and Southern hybridization using probes common to pairs of the overlapping fragments or prepared from linking ...

  17. The effect of different physical forms of rapeseed as a fat supplement on the activity of some enzymes in the duodenal chyme of dairy cows

    DEFF Research Database (Denmark)

    Moharerry, A.; Brask, Maike; Weisbjerg, Martin Riis

    2014-01-01

    on the duodenal enzyme profile in dairy cows. Four mid-lactation Danish Holstein dairy cows were submitted to an experiment with a 4 × 4 Latin square design and fed four rations containing 50% forage and 50% concentrate on a dry matter basis. The four rations were: a control ration with rapeseed meal (low fat......Studies on nutritional regulation of digestive enzymes in ruminants are scarce. Fat supplementation of diets for dairy cows changes the supply of nutrients for absorption and transport. The aim of this experiment was to study the effect of the physical form of rapeseed (Brassica napus) fat......, frozen immediately and stored frozen (–20°C) before analyses. Additional fat increased the soluble protein content in duodenal chyme (P treatments. Lipase activity increased for RSO compared with the control...

  18. Cold stress causes rapid but differential changes in properties of plasma membrane H(+)-ATPase of camelina and rapeseed.

    Science.gov (United States)

    Kim, Hyun-Sung; Oh, Jung-Min; Luan, Sheng; Carlson, John E; Ahn, Sung-Ju

    2013-06-15

    Camelina (Camelina sativa) and rapeseed (Brassica napus) are well-established oil-seed crops with great promise also for biofuels. Both are cold-tolerant, and camelina is regarded to be especially appropriate for production on marginal lands. We examined physiological and biochemical alterations in both species during cold stress treatment for 3 days and subsequent recovery at the temperature of 25°C for 0, 0.25, 0.5, 1, 2, 6, and 24h, with particular emphasis on the post-translational regulation of the plasma membrane (PM) H(+)-ATPase (EC3.6.3.14). The activity and translation of the PM H(+)-ATPase, as well as 14-3-3 proteins, increased after 3 days of cold stress in both species but recovery under normal conditions proceeded differently. The increase in H(+)-ATPase activity was the most dramatic in camelina roots after recovery for 2h at 25°C, followed by decay to background levels within 24h. In rapeseed, the change in H(+)-ATPase activity during the recovery period was less pronounced. Furthermore, H(+)-pumping increased in both species after 15min recovery, but to twice the level in camelina roots compared to rapeseed. Protein gel blot analysis with phospho-threonine anti-bodies showed that an increase in phosphorylation levels paralleled the increase in H(+)-transport rate. Thus our results suggest that cold stress and recovery in camelina and rapeseed are associated with PM H(+)-fluxes that may be regulated by specific translational and post-translational modifications. Copyright © 2013 Elsevier GmbH. All rights reserved.

  19. studies on seed transmissfon of xanthomqnas campestris pv

    African Journals Online (AJOL)

    1993-03-03

    Mar 3, 1993 ... Centro International de Agricultura. Tropical. Pastor Corrales, M.A., S.A. Beebe and FJ. Correa, 1981. Comparing two inoculation techniques for evaluating resistance in beans to Xanthomonas campestris pv phaseoli. in: Proceedings of the Fifth international. Conference on Plant Pathogenic Bacteria,. 1981 ...

  20. Real Time Live Imaging of Phytopathogenic Bacteria Xanthomonas campestris pv. campestris MAFF106712 in ‘Plant Sweet Home’

    Science.gov (United States)

    Akimoto-Tomiyama, Chiharu; Furutani, Ayako; Ochiai, Hirokazu

    2014-01-01

    Xanthomonas is one of the most widespread phytobacteria, causing diseases on a variety of agricultural plants. To develop novel control techniques, knowledge of bacterial behavior inside plant cells is essential. Xanthomonas campestris pv. campestris, a vascular pathogen, is the causal agent of black rot on leaves of Brassicaceae, including Arabidopsis thaliana. Among the X. campestris pv. campestris stocks in the MAFF collection, we selected XccMAFF106712 as a model compatible pathogen for the A. thaliana reference ecotype Columbia (Col-0). Using modified green fluorescent protein (AcGFP) as a reporter, we observed real time XccMAFF106712 colonization in planta with confocal microscopy. AcGFP-expressing bacteria colonized the inside of epidermal cells and the apoplast, as well as the xylem vessels of the vasculature. In the case of the type III mutant, bacteria colonization was never detected in the xylem vessel or apoplast, though they freely enter the xylem vessel through the wound. After 9 days post inoculation with XccMAFF106712, the xylem vessel became filled with bacterial aggregates. This suggests that Xcc colonization can be divided into main four steps, (1) movement in the xylem vessel, (2) movement to the next cell, (3) adhesion to the host plant cells, and (4) formation of bacterial aggregates. The type III mutant abolished at least steps (1) and (2). Better understanding of Xcc colonization is essential for development of novel control techniques for black rot. PMID:24736478

  1. Alleviation of cadmium toxicity to Cole (Brassica campestris L. Cruciferae) by exogenous glutathione

    Science.gov (United States)

    Wang, Jun; Huang, Bin; Chen, Xin; Shi, Yi

    2017-04-01

    In this study, we determined the influence of exogenous GSH on cadmium toxicity to cole. GSH addition had beneficial effect on plant development and growth, especially on aboveground biomass and root length. Despite that exogenous GSH insignificantly promoted Cd uptake by the plant, it could decrease of Cd root-to-shoot transport and ameliorate Cd toxicity to the plant. At 6 mg Cd kg-1 soil, GSH addition well countered the Cd-induced significant reduction in CAT activity, but only insignificantly decreased MDA content, suggesting exogenous GSH might indirectly protect plant against oxidative stress via regulating antioxidative enzyme activities. However, at 12 mg Cd kg-1 soil, GSH application insignificantly increased the antioxidant activities but significantly decreased MDA content, indicating external GSH could directly participate in removing radical oxygen species. The results suggest exogenous GSH may have the potential of decreasing Cd accumulation in the edible parts of cultivars and alleviating Cd toxicity.

  2. characterisation of rapeseed oil based resins using infrared

    African Journals Online (AJOL)

    Mgina

    ABSTRACT. Rapeseed oil which is a triglyceride had undergone chemical modification on its structure to obtain hydroxyl groups. The hydroxylated chemical structure was crosslinked using methylene-p- phenyl diisocyanate to produce a thermoset rapeseed oil resin. The cross linking process was monitored in situ using ...

  3. Characterisation of Rapeseed Oil Based Resins Using Infrared and ...

    African Journals Online (AJOL)

    Rapeseed oil which is a triglyceride had undergone chemical modification on its structure to obtain hydroxyl groups. The hydroxylated chemical structure was crosslinked using methylene-pphenyl diisocyanate to produce a thermoset rapeseed oil resin. The cross linking process was monitored in situ using the Attenuated ...

  4. characterisation of rapeseed oil based resins using infrared

    African Journals Online (AJOL)

    Mgina

    CHARACTERISATION OF RAPESEED OIL BASED RESINS. USING INFRARED AND THERMOGRAVIMETRY TECHNIQUES. LY Mwaikambo. Department of Mechanical and Industrial Engineering,. University of Dar Es salaam, P.O. Box 35131, Dar Es salaam, Tanzania, lyrmwaikambo@udsm.ac.tz. ABSTRACT. Rapeseed ...

  5. Comparative proteome analysis of drought-sensitive and drought-tolerant rapeseed roots and their hybrid F1 line under drought stress.

    Science.gov (United States)

    Mohammadi, Payam Pour; Moieni, Ahmad; Komatsu, Setsuko

    2012-11-01

    Rapeseed (Brassica napus L.), which is the third leading source of vegetable oil, is sensitive to drought stress during the early vegetative growth stage. To investigate the initial response of rapeseed to drought stress, changes in the protein expression profiles of drought-sensitive (RGS-003) and drought-tolerant lines (SLM-003), and their F1 hybrid, were analyzed using a proteomics approach. Seven-day-old rapeseed seedlings were treated with drought stress by restricting water for 7 days, and proteins were extracted from roots and separated by two-dimensional polyacrylamide gel electrophoresis. In the sensitive rapeseed line, 35 protein spots were differentially expressed under drought stress, and proteins related to metabolism, energy, disease/defense, and transport were decreased. In the tolerant line, 32 protein spots were differentially expressed under drought stress, and proteins involved in metabolism, disease/defense, and transport were increased, while energy-related proteins were decreased. Six protein spots in F1 hybrid were common among expressed proteins in the drought-sensitive and -tolerant lines. Notably, tubulin beta-2 and heat shock protein 70 were decreased in the drought-sensitive line and hybrid F1 plants, while jasmonate-inducible protein and 20S proteasome subunit PAF1 were increased in the F1 hybrids and drought-tolerant line. These results indicate that (1) V-type H(+) ATPase, plasma-membrane associated cation-binding protein, HSP 90, and elongation factor EF-2 have a role in the drought tolerance of rapeseed; (2) The decreased levels of heat shock protein 70 and tubulin beta-2 in the drought-sensitive and hybrid F1 lines might explain the reduced growth of these lines in drought conditions.

  6. Tolerance of Brassica nigra to Pieris brassicae herbivory

    NARCIS (Netherlands)

    Blatt, S.E.; Smallegange, R.C.; Hess, L.; Harvey, J.A.; Dicke, M.; Loon, van J.J.A.

    2008-01-01

    Black mustard, Brassica nigra (L.) Koch, is a wild annual species found throughout Europe and fed on by larvae of the large cabbage-white butterfly, Pieris brassicae L. We examined the impact of herbivory from P. brassicae, a gregarious herbivore, on B. nigra grown from wild seed collected locally.

  7. Brassicas limited in weed control

    OpenAIRE

    Kristiansen, P

    2006-01-01

    This article discusses the limitations of using brassica cover crops for weed control. A brief overview of the role of cover crops is provided, followed by a short review of research looking at brassica cover crops.

  8. Genetic Dissection of Leaf Development in Brassica rapa Using a Genetical Genomics Approach1[W

    Science.gov (United States)

    Xiao, Dong; Wang, Huange; Basnet, Ram Kumar; Zhao, Jianjun; Lin, Ke; Hou, Xilin; Bonnema, Guusje

    2014-01-01

    The paleohexaploid crop Brassica rapa harbors an enormous reservoir of morphological variation, encompassing leafy vegetables, vegetable and fodder turnips (Brassica rapa, ssp. campestris), and oil crops, with different crops having very different leaf morphologies. In the triplicated B. rapa genome, many genes have multiple paralogs that may be regulated differentially and contribute to phenotypic variation. Using a genetical genomics approach, phenotypic data from a segregating doubled haploid population derived from a cross between cultivar Yellow sarson (oil type) and cultivar Pak choi (vegetable type) were used to identify loci controlling leaf development. Twenty-five colocalized phenotypic quantitative trait loci (QTLs) contributing to natural variation for leaf morphological traits, leaf number, plant architecture, and flowering time were identified. Genetic analysis showed that four colocalized phenotypic QTLs colocalized with flowering time and leaf trait candidate genes, with their cis-expression QTLs and cis- or trans-expression QTLs for homologs of genes playing a role in leaf development in Arabidopsis (Arabidopsis thaliana). The leaf gene BRASSICA RAPA KIP-RELATED PROTEIN2_A03 colocalized with QTLs for leaf shape and plant height; BRASSICA RAPA ERECTA_A09 colocalized with QTLs for leaf color and leaf shape; BRASSICA RAPA LONGIFOLIA1_A10 colocalized with QTLs for leaf size, leaf color, plant branching, and flowering time; while the major flowering time gene, BRASSICA RAPA FLOWERING LOCUS C_A02, colocalized with QTLs explaining variation in flowering time, plant architectural traits, and leaf size. Colocalization of these QTLs points to pleiotropic regulation of leaf development and plant architectural traits in B. rapa. PMID:24394778

  9. Genetic dissection of leaf development in Brassica rapa using a genetical genomics approach.

    Science.gov (United States)

    Xiao, Dong; Wang, Huange; Basnet, Ram Kumar; Zhao, Jianjun; Lin, Ke; Hou, Xilin; Bonnema, Guusje

    2014-03-01

    The paleohexaploid crop Brassica rapa harbors an enormous reservoir of morphological variation, encompassing leafy vegetables, vegetable and fodder turnips (Brassica rapa, ssp. campestris), and oil crops, with different crops having very different leaf morphologies. In the triplicated B. rapa genome, many genes have multiple paralogs that may be regulated differentially and contribute to phenotypic variation. Using a genetical genomics approach, phenotypic data from a segregating doubled haploid population derived from a cross between cultivar Yellow sarson (oil type) and cultivar Pak choi (vegetable type) were used to identify loci controlling leaf development. Twenty-five colocalized phenotypic quantitative trait loci (QTLs) contributing to natural variation for leaf morphological traits, leaf number, plant architecture, and flowering time were identified. Genetic analysis showed that four colocalized phenotypic QTLs colocalized with flowering time and leaf trait candidate genes, with their cis-expression QTLs and cis- or trans-expression QTLs for homologs of genes playing a role in leaf development in Arabidopsis (Arabidopsis thaliana). The leaf gene Brassica rapa KIP-related protein2_A03 colocalized with QTLs for leaf shape and plant height; Brassica rapa Erecta_A09 colocalized with QTLs for leaf color and leaf shape; Brassica rapa Longifolia1_A10 colocalized with QTLs for leaf size, leaf color, plant branching, and flowering time; while the major flowering time gene, Brassica rapa flowering locus C_A02, colocalized with QTLs explaining variation in flowering time, plant architectural traits, and leaf size. Colocalization of these QTLs points to pleiotropic regulation of leaf development and plant architectural traits in B. rapa.

  10. Xanthan production by Xanthomonas campestris using whey permeate medium.

    Science.gov (United States)

    Savvides, A L; Katsifas, E A; Hatzinikolaou, D G; Karagouni, A D

    2012-08-01

    Xanthan gum is a polysaccharide that is widely used as stabilizer and thickener with many industrial applications in food industry. Our aim was to estimate the ability of Xanthomonas campestris ATCC 13951 for the production of xanthan gum by using whey as a growth medium, a by-product of dairy industry. X. campestris ATCC 13951 has been studied in batch cultures using a complex medium for the determination of the optimal concentration of glucose, galactose and lactose. In addition, whey was used under various treatment procedures (de-proteinated, partially hydrolyzed by β-lactamase and partially hydrolyzed and de-proteinated) as culture medium, to study the production of xanthan in a 2 l bioreactor with constant stirring and aeration. A production of 28 g/l was obtained when partially hydrolysed β-lactamase was used, which proved to be one of the highest xanthan gum production reported so far. At the same time, an effort has been made for the control and selection of the most appropriate procedure for the preservation of the strain and its use as inoculant in batch cultures, without loss of its viability and its capability of xanthan gum production. The pre-treatment of whey (whey permeate medium hydrolyzed, WPH) was very important for the production of xanthan by the strain X. campestris ATCC 13951 during batch culture conditions in a 2 l bioreactor. Preservation methods such as lyophilization, cryopreservation at various glycerol solution and temperatures have been examined. The results indicated that the best preservation method for the producing strain X. campestris ATCC 13951 was the lyophilization. Taking into account that whey permeate is a low cost by-product of the dairy industry, the production of xanthan achieved under the studied conditions was considered very promising for industrial application.

  11. Production and cytogenetics of intergeneric hybrids between the three cultivated Brassica diploids and Orychophragmusviolaceus.

    Science.gov (United States)

    Li, Z; Heneen, W K

    1999-08-01

    It has been proposed that both complete and partial separation of the parental genomes during mitosis and meiosis occurs in the intergeneric hybrids between Orychophragmus violaceus (2n=24) and the three cultivated Brassica tetraploids (B. napus, B. carinata and B. juncea). The hypothesis has been that this and the variations in chromosome numbers of these hybrids and their progenies result from the different roles of the A, B and C genomes originating from Brassica. To test this hypothesis, we produced hybrids between O. violaceus and the cultivated Brassica diploids. The hybrids with B. oleracea (2n=18, CC) had an intermediate morphology, but their petals were purple like those of O. violaceus. They were sterile and had the expected chromosome number (2n=21) in their mitotic and meiotic cells. The hybrid with B. campestris (2n=20, AA) was morphologically intermediate, except for its partial fertility and its yellow petals, which were similar to those of B. campestris. It was mixoploid (2n=23-42), and cells with 2n=34 were most frequent. Partial separation of parental genomes during mitosis, leading to the addition of O. violaceus chromosomes to the B. campestris complement, was proposed to explain the findings in the mitotic and meiotic cells of the hybrid and its progeny. In crosses with B. nigra (2n=16, BB), the majority of the F(1) plants were of the maternal type (2n=16), a small fraction had B. nigra morphology but were mixoploids (2n=16-18), predominantly with 2n=16 cells and three plants, each with a specific morphology, were mixoploids consisting of cells with varying ranges of chromosome numbers (2n=17-26, 11-17 and 14-17). The origin of these different types of plants was inferred to be a result of the complete and partial separation of parental genomes and the loss of O. violaceus chromosomes. Our findings in the three crosses suggest that the A genome was more influential than the C genome with respect to complete genome separation during mitosis and

  12. High Density Linkage Map Construction and QTL Detection for Three Silique-Related Traits in Orychophragmus violaceus Derived Brassica napus Population

    OpenAIRE

    Yang, Yi; Shen, Yusen; Li, Shunda; Ge, Xianhong; Li, Zaiyun

    2017-01-01

    Seeds per silique (SS), seed weight (SW), and silique length (SL) are important determinant traits of seed yield potential in rapeseed (Brassica napus L.), and are controlled by naturally occurring quantitative trait loci (QTLs). Mapping QTLs to narrow chromosomal regions provides an effective means of characterizing the genetic basis of these complex traits. Orychophragmus violaceus is a crucifer with long siliques, many SS, and heavy seeds. A novel B. napus introgression line with many SS w...

  13. Integration of linkage maps for the Amphidiploid Brassica napus and comparative mapping with Arabidopsis and Brassica rapa

    Science.gov (United States)

    2011-01-01

    Background The large number of genetic linkage maps representing Brassica chromosomes constitute a potential platform for studying crop traits and genome evolution within Brassicaceae. However, the alignment of existing maps remains a major challenge. The integration of these genetic maps will enhance genetic resolution, and provide a means to navigate between sequence-tagged loci, and with contiguous genome sequences as these become available. Results We report the first genome-wide integration of Brassica maps based on an automated pipeline which involved collation of genome-wide genotype data for sequence-tagged markers scored on three extensively used amphidiploid Brassica napus (2n = 38) populations. Representative markers were selected from consolidated maps for each population, and skeleton bin maps were generated. The skeleton maps for the three populations were then combined to generate an integrated map for each LG, comparing two different approaches, one encapsulated in JoinMap and the other in MergeMap. The BnaWAIT_01_2010a integrated genetic map was generated using JoinMap, and includes 5,162 genetic markers mapped onto 2,196 loci, with a total genetic length of 1,792 cM. The map density of one locus every 0.82 cM, corresponding to 515 Kbp, increases by at least three-fold the locus and marker density within the original maps. Within the B. napus integrated map we identified 103 conserved collinearity blocks relative to Arabidopsis, including five previously unreported blocks. The BnaWAIT_01_2010a map was used to investigate the integrity and conservation of order proposed for genome sequence scaffolds generated from the constituent A genome of Brassica rapa. Conclusions Our results provide a comprehensive genetic integration of the B. napus genome from a range of sources, which we anticipate will provide valuable information for rapeseed and Canola research. PMID:21306613

  14. Integration of linkage maps for the Amphidiploid Brassica napus and comparative mapping with Arabidopsis and Brassica rapa

    Directory of Open Access Journals (Sweden)

    Delourme Régine

    2011-02-01

    Full Text Available Abstract Background The large number of genetic linkage maps representing Brassica chromosomes constitute a potential platform for studying crop traits and genome evolution within Brassicaceae. However, the alignment of existing maps remains a major challenge. The integration of these genetic maps will enhance genetic resolution, and provide a means to navigate between sequence-tagged loci, and with contiguous genome sequences as these become available. Results We report the first genome-wide integration of Brassica maps based on an automated pipeline which involved collation of genome-wide genotype data for sequence-tagged markers scored on three extensively used amphidiploid Brassica napus (2n = 38 populations. Representative markers were selected from consolidated maps for each population, and skeleton bin maps were generated. The skeleton maps for the three populations were then combined to generate an integrated map for each LG, comparing two different approaches, one encapsulated in JoinMap and the other in MergeMap. The BnaWAIT_01_2010a integrated genetic map was generated using JoinMap, and includes 5,162 genetic markers mapped onto 2,196 loci, with a total genetic length of 1,792 cM. The map density of one locus every 0.82 cM, corresponding to 515 Kbp, increases by at least three-fold the locus and marker density within the original maps. Within the B. napus integrated map we identified 103 conserved collinearity blocks relative to Arabidopsis, including five previously unreported blocks. The BnaWAIT_01_2010a map was used to investigate the integrity and conservation of order proposed for genome sequence scaffolds generated from the constituent A genome of Brassica rapa. Conclusions Our results provide a comprehensive genetic integration of the B. napus genome from a range of sources, which we anticipate will provide valuable information for rapeseed and Canola research.

  15. [Phosphinothricin-resistant somatic hybrids Brassica napus + Orychophragmus violaceus].

    Science.gov (United States)

    Sakhno, L O; Komarnyts'kyĭ, I K; Cherep, M N; Kuchuk, M V

    2007-01-01

    Phosphinothricin (PPT) resistant hybrid plants between Brassica napus L. cv. Kalinovsky and Orychophragmus violaceus (L.) O.E. Shulz. were obtained as a result of somatic hybridization experiments. The hybrids inherited PPT resistance from O. violaceus plants which were previously transformed by the vector containing Spm/dSpm Zea mays transposon system with bar gene located within the nonautonomous transposon. The obtained plants had intermediate morphology. Their hybrid nature has been confirmed by isozyme (esterase and amilase activity) and PCR (bar, gus, Spm/dSpm integration) analyses. The hybrids combined B. napus plastom and O. violaceus mithochondrion that was revealed by PCR-RFLP. The hybrid plants might be included to rapeseed breeding programme after examination of their oil quality as well as to chloroplast transformation experiments that is still urgent for B. napus.

  16. Characterization of the Xanthomonas campestris pv. campestris lipopolysaccharide substructures essential for elicitation of an oxidative burst in tobacco cells.

    Science.gov (United States)

    Braun, Sebastian G; Meyer, Andreas; Holst, Otto; Pühler, Alfred; Niehaus, Karsten

    2005-07-01

    The lipopolysaccharides (LPS) of gram-negative bacteria are essential for perception of pathogens by animals and plants. To identify the LPS substructure or substructures recognized by plants, we isolated water-phase (w)LPS from different Xanthomonas campestris pv. campestris mutants and analyzed their sugar content and ability to elicit an oxidative burst in tobacco cell cultures. The different wLPS species are characterized by lacking repetitive subunits of the O-antigen, the complete O-antigen, or even most of the core region. Because loss of lipid A would be lethal to bacteria, pure lipid A was obtained from X. campestris pv. campestris wild-type wLPS by chemical hydrolysis. The elicitation experiments with tobacco cell cultures revealed that LPS detection is dependent on the bioavailability of the amphiphilic wLPS, which can form micelles in an aqueous environment. By adding deoxycholate to prevent micelle formation, all of the tested wLPS species showed elicitation capability, whereas the lipid A alone was not able to trigger an oxidative burst or calcium transients in tobacco cell cultures. These results suggest that the LPS substructure recognized by tobacco cells is localized in the inner core region of the LPS, consisting of glucose, galacturonic acid, and 3-deoxy-d-manno-oct-2-ulosonic acids. Although lipid A alone seems to be insufficient to induce an oxidative burst in tobacco cell cultures, it cannot be ruled out that lipid A or the glucosamine backbone may be important in combination with the inner core structures.

  17. Neutral sulfite semi-chemical pulping of rapeseed residues

    OpenAIRE

    Ahmadi, Mohammad; LATIBARI, Ahmad Jahan; FAEZIPOUR, Mehdi; HEDJAZI, Sahab

    2014-01-01

    Neutral sulfite semi-chemical (NSSC) pulping of rapeseed residues from Karadj rapeseed growing fields was investigated. Rapeseed residue was collected from the research field at the Agriculture and Natural Resources Campus, University of Tehran located in Karadj. Cellulose, lignin, holocellulose, extractives soluble in alcohol acetone, 1% NaOH solubility, and ash were determined as 42 ± 2%, 17 ± 1%, 77.5 ± 2%, 2.2 ± 0.1%, 50.3 ± 1.6%, and 6%, respectively. Fiber length, width, and cell wall t...

  18. [Effect of rapeseed from different distributors on the rat liver].

    Science.gov (United States)

    Alvizouri, M

    1993-01-01

    In previous papers it was reported that rapeseed could prevent the development of cirrhosis induced by carbon tetrachloride and at the same time can induce liver regeneration in the rat. In such experiments rapeseed was always obtained from the same distributor "Semillas Berentsen". When reseed of different distributors was used, neither cirrhosis prevention or liver regeneration was observed. The difference among the rapeseed used was that "Semillas Berentsen" utilizes a fungicide to preserve the seed and the other distributors do not use any preservative. This circumstance made think that the active principle responsible for the effects observed is probably the fungicide.

  19. Genetic Diversity of Xanthomonas campestris pv. vitians, the Causal Agent of Bacterial Leafspot of Lettuce.

    Science.gov (United States)

    Barak, Jeri D; Gilbertson, Robert L

    2003-05-01

    ABSTRACT Bacterial leafspot of lettuce (BLS), caused by Xanthomonas campes-tris pv. vitians, has become more prevalent in many lettuce-growing areas of the world over the past decade. To gain insight into the nature of these outbreaks, the genetic variation in X. campestris pv. vitians strains from different geographical locations was examined. All strains were first tested for pathogenicity on lettuce plants, and then genetic diversity was assessed using (i) gas-chromatographic analysis of bacterial fatty acids, (ii) polymerase chain reaction analysis of repetitive DNA sequences (rep-PCR), (iii) DNA sequence analysis of the internal transcribed spacer region 1 (ITS1) of the ribosomal RNA, (iv) restriction fragment length polymorphism (RFLP) analysis of total genomic DNA with a repetitive DNA probe, and (v) detection and partial characterization of plasmid DNA. Fatty acid analysis identified all pathogenic strains as X. campestris, but did not consistently identify all the strains as X. campestris pv. vitians. The rep-PCR fingerprints and ITS1 sequences of all pathogenic X. campestris pv. vitians strains examined were identical, and distinct from those of the other X. campestris pathovars. Thus, these characteristics did not reveal genetic diversity among X. campestris pv. vitians strains, but did allow for differentiation of X. campestris pathovars. Genetic diversity among X. campestris pv. vitians strains was revealed by RFLP analysis with a repetitive DNA probe and by characterization of plasmid DNA. This diversity was greatest among strains from different geographical regions, although diversity among strains from the same location also was detected. The results of this study suggest that these X. campestris pv. vitians strains are not clonal, but comprise a relatively homogeneous group.

  20. Can rapeseed lower methane emission from heifers?

    DEFF Research Database (Denmark)

    Hellwing, Anne Louise Frydendahl; Sørensen, Martin Tang; Weisbjerg, Martin Riis

    2013-01-01

    300 kg. Dry matter intake (DMI; P=0.01) and daily CH4 emission (P=0.002) were lowest on the FAT. However, CH4 emission per kg DMI (P=0.21) or per kg weight gain (P=0.44) was not different. The loss of CH4 as a percentage of gross energy intake tended to be lower on FAT (6.4%) than on CON (6.8%; P=0......Twelve heifers were assigned to either a control diet (CON) with 26 g fat per kg dry matter (DM) or a supplemented diet (FAT) with crushed rapeseed with 53 g fat per kg DM. Methane (CH4) emission was measured by open-circuit indirect calorimetry for four days when the heifers weighed approximately.......08). It is concluded that the FAT may have potential to reduce CH4 emission from heifers, but further studies are warranted to document this effect....

  1. Assessment of imidacloprid in Brassica environment.

    Science.gov (United States)

    Kumar, R; Dikshit, A K

    2001-09-01

    Imidacloprid was applied as seed treatment (Gaucho 70 WS, 5 and 10 g ai kg(-1) seed) and foliar spray (Confidor 200 SL, 20 and 40 g ai ha(-1)) at 50% pod formation stage on mustard (Brassica campestris Linn.) to control mustard aphid, Lipaphis erysimi Kalt. It was detectable upto 82 and 96 days in plants after sowing from lower and higher doses of seed treatment. However, it dissipated faster and became nondetectable after 7 and 15 days of foliar treatments from lower and higher rates of application, respectively. The dissipation models yielded the rate constants of 0.0209 and 0.0230 and 0.0736 and 0.0779 day(-1) from seed and foliar treatment. The corresponding half-lives of 14.40 and 13.07 and 4.09 and 3.86 days were recorded. This suggested that the dissipation was independent of initial doses and followed a first order rate kinetics. The projected TMRC of imidacloprid from seed (0.136 and 0.225 mg person(-1) day(-1)) and foliar (0.069 and 0.1497 mg person(-1) day(-1)) treatments were found lower than the MPI (3.135 mg person(-1) day(-1)). At harvest mustard grains did not contain imidacloprid residues. The absence of imidacloprid in 0-10 and 10-20 cm soil layers indicated no leaching of insecticide. Therefore, imidacloprid treatments could be taken as safe for crop protection, consumption of leaves and environmental contamination point of view.

  2. Characteristics of rapeseed oil cake using nitrogen adsorption

    Science.gov (United States)

    Sokołowska, Z.; Bowanko, G.; Boguta, P.; Tys, J.; Skiba, K.

    2013-09-01

    Adsorption of nitrogen on the rapeseed oil cake and rapeseed oil cake with wheat meal extrudates was investigated. The results are presented as adsorption-desorption isotherms. The Brunauer-Emmet and Teller equation was used to analyse the experimental sorption data. To obtain estimates of the surface area and surface fractal dimension, the sorption isotherms were analyzed using the Brunauer-Emmet and Teller and Frenkel-Halsey-Hill equations. Mesopore analysis was carried out using the Dollimore and Heal method. The properties and surface characteristic of rapeseed oil cake extrudates are related to different basic properties of particular samples and duration of the extrusion process. Extrusion conditions lead to essential differences in particular products. For all kinds of rapeseed oil cakes the amount of adsorbed nitrogen was different, but for the rapeseed oil cake extrudates a large amount of adsorbed nitrogenwas observed. The average surface area of the rapeseed oil cake extrudates was about 6.5-7.0 m2 g-1, whereas it was equal to about 4.0-6.0 m2 g-1 for rapeseed oil cake with the wheat meal extrudates. In the case of non-extruded rapeseed oil cake and wheat meal, the dominant group included ca. 2 and 5 nmpores. The values of surface fractal dimension suggested that the surface of the extrudates was more homogenous than that of the raw material. Duration of the extrusion process to 80 s resulted in a decrease in the specific surface area, surface fractal dimension, and porosity of the extrudates.

  3. Resistance of cotton towards Xanthomonas campestris pv. malvacearum.

    Science.gov (United States)

    Delannoy, E; Lyon, B R; Marmey, P; Jalloul, A; Daniel, J F; Montillet, J L; Essenberg, M; Nicole, M

    2005-01-01

    Interactions between Gossypium spp. and the bacterial pathogen Xanthomonas campestris pv. malvacearum are understood in the context of the gene-for-gene concept. Reviewed here are the genetic basis for cotton resistance, with reference to resistance genes, resistance gene analogs, and bacterial avirulence genes, together with the physiological mechanisms involved in the hypersensitive response to the pathogen, including production of signaling hormones, synthesis of antimicrobial molecules and alteration of host cell structures. This host-pathogen interaction represents the most complex resistance gene/avr gene system yet known and is one of the few in which phytoalexins are known to be specifically localized in HR cells at anti-microbial concentrations.

  4. Disruption of a CAROTENOID CLEAVAGE DIOXYGENASE 4 gene converts flower colour from white to yellow in Brassica species.

    Science.gov (United States)

    Zhang, Bao; Liu, Chao; Wang, Yaqin; Yao, Xuan; Wang, Fang; Wu, Jiangsheng; King, Graham J; Liu, Kede

    2015-06-01

    In Brassica napus, yellow petals had a much higher content of carotenoids than white petals present in a small number of lines, with violaxanthin identified as the major carotenoid compound in yellow petals of rapeseed lines. Using positional cloning we identified a carotenoid cleavage dioxygenase 4 gene, BnaC3.CCD4, responsible for the formation of flower colour, with preferential expression in petals of white-flowered B. napus lines. Insertion of a CACTA-like transposable element 1 (TE1) into the coding region of BnaC3.CCD4 had disrupted its expression in yellow-flowered rapeseed lines. α-Ionone was identified as the major volatile apocarotenoid released from white petals but not from yellow petals. We speculate that BnaC3.CCD4 may use δ- and/or α-carotene as substrates. Four variations, including two CACTA-like TEs (alleles M1 and M4) and two insertion/deletions (INDELs, alleles M2 and M3), were identified in yellow-flowered Brassica oleracea lines. The two CACTA-like TEs were also identified in the coding region of BcaC3.CCD4 in Brassica carinata. However, the two INDELs were not detected in B. napus and B. carinata. We demonstrate that the insertions of TEs in BolC3.CCD4 predated the formation of the two allotetraploids. © 2015 The Authors New Phytologist © 2015 New Phytologist Trust.

  5. Potential of Legume-Brassica Intercrops for Forage Production and Green Manure: Encouragements from a Temperate Southeast European Environment.

    Science.gov (United States)

    Jeromela, Ana M; Mikić, Aleksandar M; Vujić, Svetlana; Ćupina, Branko; Krstić, Đorđe; Dimitrijević, Aleksandra; Vasiljević, Sanja; Mihailović, Vojislav; Cvejić, Sandra; Miladinović, Dragana

    2017-01-01

    Legumes and brassicas have much in common: importance in agricultural history, rich biodiversity, numerous forms of use, high adaptability to diverse farming designs, and various non-food applications. Rare available resources demonstrate intercropping legumes and brassicas as beneficial to both, especially for the latter, profiting from better nitrogen nutrition. Our team aimed at designing a scheme of the intercrops of autumn- and spring-sown annual legumes with brassicas for ruminant feeding and green manure, and has carried out a set of field trials in a temperate Southeast European environment and during the past decade, aimed at assessing their potential for yields of forage dry matter and aboveground biomass nitrogen and their economic reliability via land equivalent ratio. This review provides a cross-view of the most important deliverables of our applied research, including eight annual legume crops and six brassica species, demonstrating that nearly all the intercrops were economically reliable, as well as that those involving hairy vetch, Hungarian vetch, Narbonne vetch and pea on one side, and fodder kale and rapeseed on the other, were most productive in both manners. Feeling encouraged that this pioneering study may stimulate similar analyses in other environments and that intercropping annual legume and brassicas may play a large-scale role in diverse cropping systems, our team is heading a detailed examination of various extended research.

  6. Potential of Legume–Brassica Intercrops for Forage Production and Green Manure: Encouragements from a Temperate Southeast European Environment

    Science.gov (United States)

    Jeromela, Ana M.; Mikić, Aleksandar M.; Vujić, Svetlana; Ćupina, Branko; Krstić, Đorđe; Dimitrijević, Aleksandra; Vasiljević, Sanja; Mihailović, Vojislav; Cvejić, Sandra; Miladinović, Dragana

    2017-01-01

    Legumes and brassicas have much in common: importance in agricultural history, rich biodiversity, numerous forms of use, high adaptability to diverse farming designs, and various non-food applications. Rare available resources demonstrate intercropping legumes and brassicas as beneficial to both, especially for the latter, profiting from better nitrogen nutrition. Our team aimed at designing a scheme of the intercrops of autumn- and spring-sown annual legumes with brassicas for ruminant feeding and green manure, and has carried out a set of field trials in a temperate Southeast European environment and during the past decade, aimed at assessing their potential for yields of forage dry matter and aboveground biomass nitrogen and their economic reliability via land equivalent ratio. This review provides a cross-view of the most important deliverables of our applied research, including eight annual legume crops and six brassica species, demonstrating that nearly all the intercrops were economically reliable, as well as that those involving hairy vetch, Hungarian vetch, Narbonne vetch and pea on one side, and fodder kale and rapeseed on the other, were most productive in both manners. Feeling encouraged that this pioneering study may stimulate similar analyses in other environments and that intercropping annual legume and brassicas may play a large-scale role in diverse cropping systems, our team is heading a detailed examination of various extended research. PMID:28326095

  7. LMI1-like genes involved in leaf margin development of Brassica napus.

    Science.gov (United States)

    Ni, Xiyuan; Liu, Han; Huang, Jixiang; Zhao, Jianyi

    2017-06-01

    In rapeseed (Brassica napus L.), leaf margins are variable and can be entire, serrate, or lobed. In our previous study, the lobed-leaf gene (LOBED-LEAF 1, BnLL1) was mapped to a 32.1 kb section of B. napus A10. Two LMI1-like genes, BnaA10g26320D and BnaA10g26330D, were considered the potential genes that controlled the lobed-leaf trait in rapeseed. In the present study, these two genes and another homologous gene (BnaC04g00850D) were transformed into Arabidopsis thaliana (L.) Heynh. plants to identify their functions. All three LMI1-like genes of B. napus produced serrate leaf margins. The expression analysis indicated that the expression level of BnaA10g26320D determined the difference between lobed- and entire-leaved lines in rapeseed. Therefore, it is likely that BnaA10g26320D corresponds to BnLL1.

  8. Complete sequence of heterogenous-composition mitochondrial genome (Brassica napus and its exogenous source

    Directory of Open Access Journals (Sweden)

    Wang Juan

    2012-11-01

    Full Text Available Abstract Background Unlike maternal inheritance of mitochondria in sexual reproduction, somatic hybrids follow no obvious pattern. The introgressed segment orf138 from the mitochondrial genome of radish (Raphanus sativus to its counterpart in rapeseed (Brassica napus demonstrates that this inheritance mode derives from the cytoplasm of both parents. Sequencing of the complete mitochondrial genome of five species from Brassica family allowed the prediction of other extraneous sources of the cybrids from the radish parent, and the determination of their mitochondrial rearrangement. Results We obtained the complete mitochondrial genome of Ogura-cms-cybrid (oguC rapeseed. To date, this is the first time that a heterogeneously composed mitochondrial genome was sequenced. The 258,473 bp master circle constituted of 33 protein-coding genes, 3 rRNA sequences, and 23 tRNA sequences. This mitotype noticeably holds two copies of atp9 and is devoid of cox2-2. Relative to nap mitochondrial genome, 40 point mutations were scattered in the 23 protein-coding genes. atp6 even has an abnormal start locus whereas tatC has an abnormal end locus. The rearrangement of the 22 syntenic regions that comprised 80.11% of the genome was influenced by short repeats. A pair of large repeats (9731 bp was responsible for the multipartite structure. Nine unique regions were detected when compared with other published Brassica mitochondrial genome sequences. We also found six homologous chloroplast segments (Brassica napus. Conclusions The mitochondrial genome of oguC is quite divergent from nap and pol, which are more similar with each other. We analyzed the unique regions of every genome of the Brassica family, and found that very few segments were specific for these six mitotypes, especially cam, jun, and ole, which have no specific segments at all. Therefore, we conclude that the most specific regions of oguC possibly came from radish. Compared with the chloroplast genome

  9. Detection of Xanthomonas campestris pv. citri by the polymerase chain reaction method

    OpenAIRE

    Hartung, J S; J.F. Daniel; Pruvost, O.P.

    1993-01-01

    pFL1 is a pUC9 derivative that contains a 572-bp EcoRI insert cloned from plasmid DNA of Xanthomonas campestris pv. citri XC62. The nucleotide sequence of pFL1 was determined, and the sequence information was used to design primers for application of the polymerase chain reaction (PCR) to the detection of X. campestris pv. citri, the causal agent of citrus bacterial canker disease. Seven 18-bp oligonucleotide primers were designed and tested with DNA from X. campestris pv. citri strains and o...

  10. Quality evaluation of rapeseed oils used as engine fuels

    Directory of Open Access Journals (Sweden)

    Marek Světlík

    2012-01-01

    Full Text Available Samples from six reference decentralised facilities and one industrial production unit of rapeseed oils were taken for the evaluation of the influence of production processes to the properties specified in the technical standard; in the laboratories, the properties limited by the standard for rapeseed oils were determined. In addition, long-term monitoring of changes in the oxidation stability in the storage test of rapeseed oils additived in the quantities of 200, 400 and 600 mg.kg−1 of the Baynox antioxidant was started. The results confirmed that the critical points in the rapeseed oil production process consist in the contamination with ash-forming elements, such as phosphorus, magnesium, calcium and overall impurities. Not only in the case of hot pressing, but also in two-step cold pressing of rapeseed it is necessary to reduce the content of ash-forming elements using additional processes, such as degumming, neutralisation and whitening. The safety step consisting of filtration down to maximum particle size of 1 μm must be always in place before the oil distribution. A positive effect of the Baynox antioxidant was clearly proved. As 200 mg.kg−1 of Baynox was added, the oxidation stability value increased from 8 to 9.05 hrs immediately after the pressing with a consequent decrease to 6 hrs after 270 days. With using of addition 400 ppm Baynox decreased oxidation stability under 6 hours not until after 390 days of storage. With addition 600 ppm Baynox the oxidation stability of rapeseed oil even after 510 days of storage makes 6.5 hours. The quality monitoring brought about necessary findings and knowledge for the optimisation of the rapeseed oil production and distribution as engine fuels. In addition, it serves as an initial supporting document for the creation of the necessary quality control system.

  11. Survival of Alternaria brassicae in seeds and crop debris of rapeseed and mustard in Nepal

    DEFF Research Database (Denmark)

    Shrestha, S.K.; Munk, Lisa; Mathur, S.

    2003-01-01

    Contributions from The Danish Government Institute of Seed Pathology for Developing Countries - Copenhagen, Denmark, No. 166......Contributions from The Danish Government Institute of Seed Pathology for Developing Countries - Copenhagen, Denmark, No. 166...

  12. Identification of genomic regions involved in resistance against Sclerotinia sclerotiorum from wild Brassica oleracea.

    Science.gov (United States)

    Mei, Jiaqin; Ding, Yijuan; Lu, Kun; Wei, Dayong; Liu, Yao; Disi, Joseph Onwusemu; Li, Jiana; Liu, Liezhao; Liu, Shengyi; McKay, John; Qian, Wei

    2013-02-01

    The lack of resistant source has greatly restrained resistance breeding of rapeseed (Brassica napus, AACC) against Sclerotinia sclerotiorum which causes severe yield losses in rapeseed production all over the world. Recently, several wild Brassica oleracea accessions (CC) with high level of resistance have been identified (Mei et al. in Euphytica 177:393-400, 2011), bringing a new hope to improve Sclerotinia resistance of rapeseed. To map quantitative trait loci (QTL) for Sclerotinia resistance from wild B. oleracea, an F2 population consisting of 149 genotypes, with several clones of each genotypes, was developed from one F1 individual derived from the cross between a resistant accession of wild B. oleracea (B. incana) and a susceptible accession of cultivated B. oleracea var. alboglabra. The F2 population was evaluated for Sclerotinia reaction in 2009 and 2010 under controlled condition. Significant differences among genotypes and high heritability for leaf and stem reaction indicated that genetic components accounted for a large portion of the phenotypic variance. A total of 12 QTL for leaf resistance and six QTL for stem resistance were identified in 2 years, each explaining 2.2-28.4 % of the phenotypic variation. The combined effect of alleles from wild B. oleracea reduced the relative susceptibility by 22.5 % in leaves and 15 % in stems on average over 2 years. A 12.8-cM genetic region on chromosome C09 of B. oleracea consisting of two major QTL intervals for both leaf and stem resistance was assigned into a 2.7-Mb genomic region on chromosome A09 of B. rapa, harboring about 30 putative resistance-related genes. Significant negative corrections were found between flowering time and relative susceptibility of leaf and stem. The association of flowering time with Sclerotinia resistance is discussed.

  13. Identification of a novel type III secretion-associated outer membrane-bound protein from Xanthomonas campestris pv. campestris.

    Science.gov (United States)

    Li, Lei; Li, Rui-Fang; Ming, Zhen-Hua; Lu, Guang-Tao; Tang, Ji-Liang

    2017-02-15

    Many bacterial pathogens employ the type III secretion system (T3SS) to translocate effector proteins into eukaryotic cells to overcome host defenses. To date, most of our knowledge about the T3SS molecular architecture comes from the studies on animal pathogens. In plant pathogens, nine Hrc proteins are believed to be structural components of the T3SS, of which HrcC and HrcJ form the outer and inner rings of the T3SS, respectively. Here, we demonstrated that a novel outer membrane-bound protein (HpaM) of Xanthomonas campestris pv. campestris is critical for the type III secretion and is structurally and functionally conserved in phytopathogenic Xanthomonas spp. We showed that the C-terminus of HpaM extends into the periplasm to interact physically with HrcJ and the middle part of HpaM interacts physically with HrcC. It is clear that the outer and inner rings compose the main basal body of the T3SS apparatus in animal pathogens. Therefore, we presume that HpaM may act as a T3SS structural component, or play a role in assisting assembling or affecting the stability of the T3SS apparatus. HpaM is a highly prevalent and specific protein in Xanthomonas spp., suggesting that the T3SS of Xanthomonas is distinctive in some aspects from other pathogens.

  14. Rape-seed oil - a substitute for mineral oil?

    Energy Technology Data Exchange (ETDEWEB)

    Badent, R.; Kist, K.; Schwab, A.J. [University of Karlsruhe (Germany). Institute of Electric Systems and High-Voltage Technology

    1999-07-01

    This paper presents the results obtained from the study on the basic characteristics of rape-seed oil considered to be a substitute of mineral oil in power transformers. The results show that rape- seed oil is usable as an insulating liquid. Furthermore, results are presented concerning the breakdown behaviour in uniform (plane-plane geometry) and non-uniform (rod-plane geometry) fields under impulse conditions with gaps up to 40 mm and voltages up to 650 kV. A sufficient high 50 Hz breakdown voltage is the most important precondition for a medium to be used as an insulator. The dielectric strength of rape-seed oil exceeds more than 50 kV/2,5 mm and consequently fulfils the requirements of the standards. The measurement of the permittivity and tan {delta} at 90{sup o}C yields to 3,18 and 0,015, respectively and is comparable to the values of standard mineral oil. However, there are still some problems to be overcome. Beside the insulating task the liquid dielectric has also a cooling function in power apparatus. Since the dynamic viscosity of rape-seed oil (about 70 mm{sup 2}/s at 40{sup o}C) is higher than that of mineral oil, rape-seed oil has a lower ability for heat conduction. A further problem is the solidification of rape-seed oil below -5{sup o}C. (author)

  15. Meio semi-seletivo para isolamento de Xanthomonas campestris pv. viticola

    Directory of Open Access Journals (Sweden)

    Peixoto Ana Rosa

    2006-01-01

    Full Text Available O cancro bacteriano causado por Xanthomonas campestris pv. viticola é a fitobacteriose mais importante da videira no Submédio São Francisco. O isolamento de X. campestris pv. viticola de tecidos vegetais infectados é dificultado pela presença de contaminantes bacterianos, entre os quais Microbacterium barkeri. Objetivando-se a formulação de meio de cultura semi-seletivo, 22 isolados de X. campestris pv. viticola foram testados com relação a 30 antibióticos. O meio semi-seletivo NYDAM (extrato de carne 3, peptona 5, glicose 10, extrato de levedura 5, ágar 18 e ampicilina 0,1 em g L-1 inibiu M. barkeri e bactérias fitopatogênicas podendo ser utilizado para isolar X. campestris pv. viticola de hospedeiros com infecção natural em campo.

  16. Detection of Xanthomonas campestris pv. citri by the polymerase chain reaction method.

    Science.gov (United States)

    Hartung, J S; Daniel, J F; Pruvost, O P

    1993-04-01

    pFL1 is a pUC9 derivative that contains a 572-bp EcoRI insert cloned from plasmid DNA of Xanthomonas campestris pv. citri XC62. The nucleotide sequence of pFL1 was determined, and the sequence information was used to design primers for application of the polymerase chain reaction (PCR) to the detection of X. campestris pv. citri, the causal agent of citrus bacterial canker disease. Seven 18-bp oligonucleotide primers were designed and tested with DNA from X. campestris pv. citri strains and other strains of X. campestris associated with Citrus spp. as templates in the PCR. Four primer pairs directed the amplification of target DNA from X. campestris pv. citri strains but not from strains of X. campestris associated with a different disease, citrus bacterial spot. Primer pair 2-3 directed the specific amplification of target DNA from pathotype A but not other pathotypes of X. campestris pv. citri. A pH 9.0 buffer that contained 1% Triton X-100 and 0.1% gelatin was absolutely required for the successful amplification of the target DNA, which was 61% G+C. Limits of detection after amplification and gel electrophoresis were 25 pg of purified target DNA and about 10 cells when Southern blots were made after gel electrophoresis and probed with biotinylated pFL1. This level of detection represents an increase in sensitivity of about 100-fold over that of dot blotting with the same hybridization probe. PCR products of the expected sizes were amplified from DNA extracted from 7-month-old lesions from which viable bacteria could not be isolated. These products were confirmed to be specific for X. campestris pv. citri by Southern blotting. This PCR-based detection protocol will be a useful addition to current methods of detection of this pathogen, which is currently the target of international quarantine measures.

  17. Antagonism of yeasts to Xanthomonas campestris pv. campestris on cabbage phylloplane in field Antagonismo de leveduras a Xanthomonas campestris pv. campestris no filoplano de repolho em condições de campo

    Directory of Open Access Journals (Sweden)

    Sayonara M.P. Assis

    1999-07-01

    Full Text Available Twenty yeast isolates, obtained from cabbage phylloplane, were evaluated for antagonistic activity against Xanthomonas campestris pv. campestris, in field. Plants of cabbage cv. Midori were pulverized simultaneously with suspensions of antagonists and pathogen. After 10 days, plants were evaluated through percentage of foliar area with lesions. Percentage of disease severity reduction (DSR% was also calculated. Yeast isolates LR32, LR42 and LR19 showed, respectively, 72, 75 and 79% of DSR. These antagonists were tested in seven different application periods in relation to pathogen inoculation (T1=4 d before; T2=simultaneously; T3=4 d after; T4=4 d before + simultaneously; T5=4 d after + simultaneously; T6=4 d before + 4 d after; T7=4 d before + simultaneously + 4 d after. The highest DSRs were showed by LR42 (71%, LR42 (67%, LR35 (69% and LR19 (68% in the treatments T7, T4, T5 and T6, which significantly differed from the others. The same yeast antagonists were also tested for black rot control using different cabbage cultivars (Fuyutoyo, Master-325, Matsukaze, Midori, Sekai I and Red Winner. The DSRs varied from 58 to 61%, and there was no significant difference among cultivars.Vinte isolados de leveduras, obtidos a partir do filoplano de repolho foram avaliados pela atividade antagônica contra Xanthomonas campestris pv. campestris, em condições de campo. Plantas de repolho cv. Midori foram pulverizadas simultaneamente com suspensões do antagonista e do patógeno. Após 10 dias, as plantas foram avaliadas através da porcentagem de área foliar infectada. A porcentagem de redução da severidade da doença (DSR%, também foi calculada. Os isolados de leveduras LR32, LR42 e LR19 apresentaram, respectivamente, 72, 75 e 79% de DSR. Estes isolados foram testados em sete diferentes períodos de aplicação dos antagonistas em relação a inoculação do patógeno. (T1=4d antes; T2=simultaneamente; T3=4 d após; T4=4 d antes + simultaneamente; T5

  18. Tranformasi Fragmen Dna Kromosom Xanthomonas Campestris ke dalam Escherichia Coli

    Directory of Open Access Journals (Sweden)

    Wibowo Mangunwardoyo

    2002-04-01

    Full Text Available Research on DNA transformation of Xanthomonas campestris into Escherichia coli DH5αα using plasmid vector Escherichia coli (pUC19. was carried out. DNA chromosome was isolated using CTAB method, alkali lysis method was used to isolate DNA plasmid. Both of DNA plasmid and chromosome were digested using restriction enzyme EcoRI. Competent cell was prepared with CaCl2 and heat shock method for transformation procedure. The result revealed transformation obtain 5 white colonies, with transformation frequency was 1,22 x 10-8 colony/competent cell. Electrophoresis analysis showed the DNA fragment (insert in range 0.5 – 7,5 kb. Further research should be carried out to prepare the genomic library to obtain better result of transformant.

  19. Biosynthesis of Zinc Oxide Nano-rods Using Xanthomonas campestris

    Directory of Open Access Journals (Sweden)

    Zahra sadat Mahdi

    2017-06-01

    Full Text Available Introduction: one dimensional nanocrystals especially nano-rods have attracted a great deal of attention due to their unique properties and wide applications in industry. Chemical and physical methods which are currently used to produce zinc oxide nano- rods, often leave toxic chemicals on surface of nanoparticles limiting their applications for health and medical purposes. Therefore, biological synthesis of zinc oxide nanoparticles has been considered as an environmentally friendly process and a potential alternative to chemical and physical methods. Materials and methods: Nano-rods of zinc oxide were produced by Xanthomonas campestris using zinc nitrate hexa hydrate as substrate, in a shaker incubator at 37 ° C and pH 7. The powder produced was then calcined at 600 ° C for 2 hours after drying. The synthesized ZnO nanoparticles were characterized using FTIR, XRD, SEM, EDX and UV–vis spectroscopy. Results: FTIR analysis was used to identify functional groups involved in the biosynthesis of ZnO NPs. The peak observed at 563 cm-1 corresponds to the stretching vibrations of ZnO NPs. XRD analysis revealed that the hexagonal ZnO nanoparticles synthesized were pure and crystalline in nature. The morphology and size of the powder were investigated using SEM analysis and the results showed that ZnO nano-rods have a diameter ranging from 122–200 nm with an average length about 300 nm. EDX analysis was performed for determination of the elemental composition and purity of samples. The recorded EDX spectrum revealed the high purity of the synthesized ZnO nano-rods without detection of any impurities. The absorption peak at 376 nm indicating the presence of zinc oxide nanoparticles was further confirmed by UV-Vis spectroscopy. Discussion and conclusion: The current research work describes a low-cost, unreported, nontoxic, simple, safe and eco-friendly method for the biosynthesis of zinc oxide nanoparticle using xanthomonas campestris as the reducing

  20. Enhanced bioenergy recovery from rapeseed plant in a biorefinery concept

    DEFF Research Database (Denmark)

    Luo, Gang; Talebnia, Farid; Karakashev, Dimitar Borisov

    2011-01-01

    The present study investigated the utilization of the whole rapeseed plant (seed and straw) for multi-biofuels production in a biorefinery concept. Results showed that bioethanol production from straw was technically feasible with ethanol yield of 0.15 g ethanol/g dry straw after combined alkaline......, results from continuous experiments demonstrated that the two-stage hydrogen and methane fermentation process could work stably at organic loading rate up to 4.5 gVS/(L d), while the single-stage methane production process failed. The energy recovery efficiency from rapeseed plant increased from 20...

  1. Avaliação de meios semi-seletivos e técnicas moleculares para detecção de Xanthomonas campestris pv. campestris

    OpenAIRE

    Amaral, Lívio da Silva

    2012-01-01

    Avaliou-se a eficiência de meios de cultura semi-seletivos, de testes de patogenicidade e a especificidade de primers para a detecção de Xanthomonas campestris pv. campestris (Xcc). Para a execução dos experimentos, foram utilizados 29 isolados recebidos de diferentes regiões do Brasil. Para a confirmação da identidade dos isolados foram realizados os testes de produção de xantomonadinas e de utilização de asparagina, análise da região 16s do genoma bacteriano e testes de patogenicidade. Dos ...

  2. Xanthomonas campestris pv. vesicatoria Secretes Proteases and Xylanases via the Xps Type II Secretion System and Outer Membrane Vesicles

    Science.gov (United States)

    Solé, Magali; Scheibner, Felix; Hoffmeister, Anne-Katrin; Hartmann, Nadine; Hause, Gerd; Rother, Annekatrin; Jordan, Michael; Lautier, Martine; Arlat, Matthieu

    2015-01-01

    ABSTRACT Many plant-pathogenic bacteria utilize type II secretion (T2S) systems to secrete degradative enzymes into the extracellular milieu. T2S substrates presumably mediate the degradation of plant cell wall components during the host-pathogen interaction and thus promote bacterial virulence. Previously, the Xps-T2S system from Xanthomonas campestris pv. vesicatoria was shown to contribute to extracellular protease activity and the secretion of a virulence-associated xylanase. The identities and functions of additional T2S substrates from X. campestris pv. vesicatoria, however, are still unknown. In the present study, the analysis of 25 candidate proteins from X. campestris pv. vesicatoria led to the identification of two type II secreted predicted xylanases, a putative protease and a lipase which was previously identified as a virulence factor of X. campestris pv. vesicatoria. Studies with mutant strains revealed that the identified xylanases and the protease contribute to virulence and in planta growth of X. campestris pv. vesicatoria. When analyzed in the related pathogen X. campestris pv. campestris, several T2S substrates from X. campestris pv. vesicatoria were secreted independently of the T2S systems, presumably because of differences in the T2S substrate specificities of the two pathogens. Furthermore, in X. campestris pv. vesicatoria T2S mutants, secretion of T2S substrates was not completely absent, suggesting the contribution of additional transport systems to protein secretion. In line with this hypothesis, T2S substrates were detected in outer membrane vesicles, which were frequently observed for X. campestris pv. vesicatoria. We, therefore, propose that extracellular virulence-associated enzymes from X. campestris pv. vesicatoria are targeted to the Xps-T2S system and to outer membrane vesicles. IMPORTANCE The virulence of plant-pathogenic bacteria often depends on TS2 systems, which secrete degradative enzymes into the extracellular milieu. T2S

  3. The progress of intersubgenomic heterosis studies in Brassica napus

    African Journals Online (AJOL)

    The new nomenclature of Brassica has been suggested in a previous study by same authours where the symbols of Ar, Aj and An represented the A genome in the Brassica rapa, Brassica juncea and Brassica napus, Bb, Bj and Bc for the B genome of Brassica nigra (black mustard), B. juncea and Brassica carinata, Co, Cn ...

  4. High-throughput multiplex cpDNA resequencing clarifies the genetic diversity and genetic relationships among Brassica napus, Brassica rapa and Brassica oleracea.

    Science.gov (United States)

    Qiao, Jiangwei; Cai, Mengxian; Yan, Guixin; Wang, Nian; Li, Feng; Chen, Binyun; Gao, Guizhen; Xu, Kun; Li, Jun; Wu, Xiaoming

    2016-01-01

    Brassica napus (rapeseed) is a recent allotetraploid plant and the second most important oilseed crop worldwide. The origin of B. napus and the genetic relationships with its diploid ancestor species remain largely unresolved. Here, chloroplast DNA (cpDNA) from 488 B. napus accessions of global origin, 139 B. rapa accessions and 49 B. oleracea accessions were populationally resequenced using Illumina Solexa sequencing technologies. The intraspecific cpDNA variants and their allelic frequencies were called genomewide and further validated via EcoTILLING analyses of the rpo region. The cpDNA of the current global B. napus population comprises more than 400 variants (SNPs and short InDels) and maintains one predominant haplotype (Bncp1). Whole-genome resequencing of the cpDNA of Bncp1 haplotype eliminated its direct inheritance from any accession of the B. rapa or B. oleracea species. The distribution of the polymorphism information content (PIC) values for each variant demonstrated that B. napus has much lower cpDNA diversity than B. rapa; however, a vast majority of the wild and cultivated B. oleracea specimens appeared to share one same distinct cpDNA haplotype, in contrast to its wild C-genome relatives. This finding suggests that the cpDNA of the three Brassica species is well differentiated. The predominant B. napus cpDNA haplotype may have originated from uninvestigated relatives or from interactions between cpDNA mutations and natural/artificial selection during speciation and evolution. These exhaustive data on variation in cpDNA would provide fundamental data for research on cpDNA and chloroplasts. © 2015 Society for Experimental Biology, Association of Applied Biologists and John Wiley & Sons Ltd.

  5. High-throughput polymorphism detection and genotyping in Brassica napus using next-generation RAD sequencing

    Directory of Open Access Journals (Sweden)

    Bus Anja

    2012-06-01

    Full Text Available Abstract Background The complex genome of rapeseed (Brassica napus is not well understood despite the economic importance of the species. Good knowledge of sequence variation is needed for genetics approaches and breeding purposes. We used a diversity set of B. napus representing eight different germplasm types to sequence genome-wide distributed restriction-site associated DNA (RAD fragments for polymorphism detection and genotyping. Results More than 113,000 RAD clusters with more than 20,000 single nucleotide polymorphisms (SNPs and 125 insertions/deletions were detected and characterized. About one third of the RAD clusters and polymorphisms mapped to the Brassica rapa reference sequence. An even distribution of RAD clusters and polymorphisms was observed across the B. rapa chromosomes, which suggests that there might be an equal distribution over the Brassica oleracea chromosomes, too. The representation of Gene Ontology (GO terms for unigenes with RAD clusters and polymorphisms revealed no signature of selection with respect to the distribution of polymorphisms within genes belonging to a specific GO category. Conclusions Considering the decreasing costs for next-generation sequencing, the results of our study suggest that RAD sequencing is not only a simple and cost-effective method for high-density polymorphism detection but also an alternative to SNP genotyping from transcriptome sequencing or SNP arrays, even for species with complex genomes such as B. napus.

  6. Dust Reduction in Broiler Houses by Spraying Rapeseed Oil

    NARCIS (Netherlands)

    Aarnink, A.J.A.; Harn, van J.; Hattum, van T.G.; Zhao, Y.; Ogink, N.W.M.

    2011-01-01

    The effect of spraying rapeseed oil on the reduction of dust and ammonia concentrations and emissions, and on animal parameters was investigated in a dose-response study in a broiler house during three growing periods in four (round 1) or five rooms (rounds 2 and 3). The spraying rates varied per

  7. Enzyme assisted protein extraction from rapeseed, soybean, and microalgae meals

    NARCIS (Netherlands)

    Sari, Y.W.; Bruins, M.E.; Sanders, J.P.M.

    2013-01-01

    Oilseed meals that are by-products from oil production are potential resources for protein. The aim of this work is to investigate the use of enzymes in assisting in the extraction of protein from different oilseed meals, namely rapeseed, soybean, and microalgae meals. In addition, microalgae

  8. Glucosinolates in rapeseed as antinutritive factors in animal nutrition

    Directory of Open Access Journals (Sweden)

    Kokić Bojana

    2012-01-01

    Full Text Available Rapeseed has multiple purposes: animal nutrition, production of oil and biodiesel. Content of oil and protein in dry seeds of rapeseed is 40-47% and 19-29%, respectively. However, the seed also contains harmful substances: glucosinolates, erucic acid, phytate and tannin. This paper describes the importance of rapeseed in animal nutrition and shows the possibility of its inclusion in animal meal depending on the content of glucosinolates. The main antinutritive factors present in this oil crop are glucosinolates, therefore this paper shows their biological effect in animal nutrition and their detoxification. Canola varieties have reduced glucosinolate content and they have almost entirely superseded the old varieties of rapeseed. Glucosinolates alone are biologically inactive molecules, but their degradation products are biologically active and well known for their diverse biological effects. The degree of negative impact of glucosinolates in the diet of animals depends on their level and composition of formed degradation products, but also the species and age of animals. In order to reduce glucosinolate content different methods are used which include their hydrolysis or decomposition before feeding the animals.

  9. Incorporating pleiotropic quantitative trait loci in dissection of complex traits: seed yield in rapeseed as an example.

    Science.gov (United States)

    Luo, Ziliang; Wang, Meng; Long, Yan; Huang, Yongju; Shi, Lei; Zhang, Chunyu; Liu, Xiang; Fitt, Bruce D L; Xiang, Jinxia; Mason, Annaliese S; Snowdon, Rod J; Liu, Peifa; Meng, Jinling; Zou, Jun

    2017-08-01

    A comprehensive linkage atlas for seed yield in rapeseed. Most agronomic traits of interest for crop improvement (including seed yield) are highly complex quantitative traits controlled by numerous genetic loci, which brings challenges for comprehensively capturing associated markers/genes. We propose that multiple trait interactions underlie complex traits such as seed yield, and that considering these component traits and their interactions can dissect individual quantitative trait loci (QTL) effects more effectively and improve yield predictions. Using a segregating rapeseed (Brassica napus) population, we analyzed a large set of trait data generated in 19 independent experiments to investigate correlations between seed yield and other complex traits, and further identified QTL in this population with a SNP-based genetic bin map. A total of 1904 consensus QTL accounting for 22 traits, including 80 QTL directly affecting seed yield, were anchored to the B. napus reference sequence. Through trait association analysis and QTL meta-analysis, we identified a total of 525 indivisible QTL that either directly or indirectly contributed to seed yield, of which 295 QTL were detected across multiple environments. A majority (81.5%) of the 525 QTL were pleiotropic. By considering associations between traits, we identified 25 yield-related QTL previously ignored due to contrasting genetic effects, as well as 31 QTL with minor complementary effects. Implementation of the 525 QTL in genomic prediction models improved seed yield prediction accuracy. Dissecting the genetic and phenotypic interrelationships underlying complex quantitative traits using this method will provide valuable insights for genomics-based crop improvement.

  10. Reuse of rapeseed by-products from biodiesel production

    Directory of Open Access Journals (Sweden)

    Tajana Krička

    2015-03-01

    Full Text Available The objective of this paper is to investigate usability of rapeseed cake from biodiesel fuel production as an energy source. For this research, rapeseed was grown at the research site of the Faculty of Agriculture in Zagreb, Croatia. The investigated rapeseed cake, residue from cold pressing, was divided in two groups of samples. The first group was a mix of three varieties (Bristol, Express and Navajo, while the other group consisted of three hybrids (Artus, Baldur, Titan. The utilization of rapeseed cake for energy via two routes was evaluated; namely, utilization of rapeseed cake as (1 solid biofuel (pellets with addition of 3% of glycerol, and (2 as substrate in anaerobic digestion (AD. In investigation of cake as solid fuel, proximate (moisture content, ash content, fixed carbon and volatile matter, ultimate (content of carbon, sulphur, hydrogen, oxygen and nitrogen and physical and calometry analyses (abrasion, diameter, length, density, higher and lower heating value were carried out. As for its use in AD, production of biogas during 40 days was monitored with a view of assessing the use of digested residue as fertilizer in agricultural production. Both groups of digested residues were analysed (pH, electroconductivity, moisture content, ash content, content of nitrogen and carbon, C/N ratio, content of P2O5, K2O, Ca, Mg, Na. The analysis indicated that the investigated raw material is usable as solid and gas biofuel, and digested residue as fertilizer in ecological agriculture. The two groups of samples analysed here did not show significant differences.

  11. Multivariate analysis of quantitative traits can effectively classify rapeseed germplasm

    Directory of Open Access Journals (Sweden)

    Jankulovska Mirjana

    2014-01-01

    Full Text Available In this study, the use of different multivariate approaches to classify rapeseed genotypes based on quantitative traits has been presented. Tree regression analysis, PCA analysis and two-way cluster analysis were applied in order todescribe and understand the extent of genetic variability in spring rapeseed genotype by trait data. The traits which highly influenced seed and oil yield in rapeseed were successfully identified by the tree regression analysis. Principal predictor for both response variables was number of pods per plant (NP. NP and 1000 seed weight could help in the selection of high yielding genotypes. High values for both traits and oil content could lead to high oil yielding genotypes. These traits may serve as indirect selection criteria and can lead to improvement of seed and oil yield in rapeseed. Quantitative traits that explained most of the variability in the studied germplasm were classified using principal component analysis. In this data set, five PCs were identified, out of which the first three PCs explained 63% of the total variance. It helped in facilitating the choice of variables based on which the genotypes’ clustering could be performed. The two-way cluster analysissimultaneously clustered genotypes and quantitative traits. The final number of clusters was determined using bootstrapping technique. This approach provided clear overview on the variability of the analyzed genotypes. The genotypes that have similar performance regarding the traits included in this study can be easily detected on the heatmap. Genotypes grouped in the clusters 1 and 8 had high values for seed and oil yield, and relatively short vegetative growth duration period and those in cluster 9, combined moderate to low values for vegetative growth duration and moderate to high seed and oil yield. These genotypes should be further exploited and implemented in the rapeseed breeding program. The combined application of these multivariate methods

  12. Effect of Salinity and Low Osmotic Potential on the Germination and Seedling Growth of Rapeseed Cultivars with Different Stress Tolerance

    Directory of Open Access Journals (Sweden)

    Roberta Pace

    2010-03-01

    Full Text Available In mediterranean environments, rapeseed is grown in fall-winter with late-summer sowing and this implies that germination and initial seedling growth may occur in soils with low water content and/or high salinity. Lab experiments were carried out to study the effect of the level and timing of salt and osmotic stress application on the germination and seedling growth of rapeseed (Brassica napus var. oleifera Del. cultivars with different stress tolerance. After a preliminary screening on eighteen cultivars, four hybrids with different stress tolerance during germination were chosen to study germination on Petri dishes at 14 increasing concentrations of PEG 6000 (ψs up to -1.5 MPa and 12 increasing concentrations of NaCl (up to 600 mM. Seedlings from seeds germinated at 0 and 250 mM of NaCl were then grown into boxes for the slant test containing NaCl solutions 0 mM and 100 mM, while seedlings from seeds germinated -0.8 and -0.03 MPa (PEG were grown in pots containing siliceous sand with a water content equivalent to field capacity or half of field capacity. In both experiments seedlings were grown for 11 days under controlled light/temperature conditions. Therefore, for both salt and osmotic stress experiments, the following four combinations for “germination-growth” conditions were obtained for each cultivar: optimum-optimum; optimum-stress; stress-optimum; stress-stress. The following determinations were performed: final percentage germination, time to 50% germination (T50, and base water potential of seeds; dry and fresh weights, and shoot and root lengths of seedlings at the end of the growth period (i.e. 11 days after plant transfer to the growth medium, and correspondent relative growth rates between the start and the end of the growth period. The different degree of stress tolerance observed among rapeseed cultivars for germination was in the order of 150 mMol for NaCl concentration and 0.2-0.3 MPa for osmotic potential. Nonetheless

  13. The cloning, crystallization and preliminary X-ray analysis of XC2113, a YaeQ protein from Xanthomonas campestris

    Energy Technology Data Exchange (ETDEWEB)

    Chio, Kuo-Cheng; Chin, Ko-Hsin [Institute of Biochemistry, National Chung-Hsing University, Taichung 40227,Taiwan (China); Gao, Fei Philip [Florida State University, Tallahassee, FL 32310 (United States); Lyu, Ping-Chiang [Department of Life Science, National Tsing Hua University, Hsin-Chu,Taiwan (China); Shr, Hui-Lin; Wang, Andrew H.-J. [Institute of Biological Chemistry, Academia Sinica, Nankang, Taipei,Taiwan (China); Core Facility for Protein Crystallography, Academia Sinica, Nankang, Taipei,Taiwan (China); Chou, Shan-Ho, E-mail: shchou@nchu.edu.tw [Institute of Biochemistry, National Chung-Hsing University, Taichung 40227,Taiwan (China)

    2006-10-01

    A YaeQ protein from the plant pathogen X. campestris pv. campestris has been overexpressed in E. coli, purified and crystallized. The crystals diffracted well to a resolution of 1.28 Å. Xanthomonas campestris is a Gram-negative bacterium that is phytopathogenic to cruciferous plants and causes worldwide agricultural loss. It is therefore important to identify potential pathogenic factors involved in this plant disease. Here, the cloning, expression, crystallization and preliminary X-ray analysis of XC2113, a YaeQ protein possibly involved in the production of virulence factors in Xanthomonas campestris pathovar campestris, are reported. The XC2113 crystals diffracted well to a resolution of at least 1.28 Å. They are orthorhombic and belong to space group P2{sub 1}2{sub 1}2{sub 1}, with unit-cell parameters a = 32.86, b = 62.69, c = 79.96 Å.

  14. Modelling Xanthomonas campestris batch fermentations in a bubble column.

    Science.gov (United States)

    Pons, A; Dussap, C G; Gros, J B

    1989-01-20

    Rate and yield expressions relating to biomass and xanthan formation and to nitrogen, glucose, and oxygen consumption were established for Xanthomonas campestris batch fermentations in a bubble column. Microbial growth was described by the logistic rate equation, characterized by a maximum specific growth rate mu(M) = 0.5 h(-1) and a maximum attainable cell concentration provided by nitrogenous compounds. With regard to carbon metabolism, the decrease with time in experimental yields and in the experimental specific rates of xanthan production and glucose assimilation demonstrated the inadequacy of the Luedeking-Piret model. These decreases were connected to the simultaneous drop in dissolved-oxygen tension observed during xanthan synthesis. The knowledge of metabolic pathways and energetic balance were used to establish the relationships between substrate utilization, ATP generation, and xanthan production. The model was structured by assuming the oxygen limitation of both the respiration rate and the efficiency of the oxidative phosphorylation mechanism (P/O ratio). Consequently, the specific rates and yield expressions became dependent on the dissolved-oxygen tension, i.e., of the volumetric oxygen transfer in the fermentor.

  15. SNP markers-based map construction and genome-wide linkage analysis in Brassica napus.

    Science.gov (United States)

    Raman, Harsh; Dalton-Morgan, Jessica; Diffey, Simon; Raman, Rosy; Alamery, Salman; Edwards, David; Batley, Jacqueline

    2014-09-01

    An Illumina Infinium array comprising 5306 single nucleotide polymorphism (SNP) markers was used to genotype 175 individuals of a doubled haploid population derived from a cross between Skipton and Ag-Spectrum, two Australian cultivars of rapeseed (Brassica napus L.). A genetic linkage map based on 613 SNP and 228 non-SNP (DArT, SSR, SRAP and candidate gene markers) covering 2514.8 cM was constructed and further utilized to identify loci associated with flowering time and resistance to blackleg, a disease caused by the fungus Leptosphaeria maculans. Comparison between genetic map positions of SNP markers and the sequenced Brassica rapa (A) and Brassica oleracea (C) genome scaffolds showed several genomic rearrangements in the B. napus genome. A major locus controlling resistance to L. maculans was identified at both seedling and adult plant stages on chromosome A07. QTL analyses revealed that up to 40.2% of genetic variation for flowering time was accounted for by loci having quantitative effects. Comparative mapping showed Arabidopsis and Brassica flowering genes such as Phytochrome A/D, Flowering Locus C and agamous-Like MADS box gene AGL1 map within marker intervals associated with flowering time in a DH population from Skipton/Ag-Spectrum. Genomic regions associated with flowering time and resistance to L. maculans had several SNP markers mapped within 10 cM. Our results suggest that SNP markers will be suitable for various applications such as trait introgression, comparative mapping and high-resolution mapping of loci in B. napus. © 2014 Society for Experimental Biology, Association of Applied Biologists and John Wiley & Sons Ltd.

  16. Characterization of products from the pyrolysis of rapeseed oil cake.

    Science.gov (United States)

    Ucar, Suat; Ozkan, Ahmet R

    2008-12-01

    The main aim of this study was to investigate the composition of products from the pyrolysis of rapeseed oil cake in a fixed bed reactor at 400, 450, 500, 700 and 900 degrees C. The gas products mainly consisted of CO(2), CO, CH(4) and H(2)S at 500 degrees C. Empirical formula of bio-oil from the pyrolysis of rapeseed oil cake was CH(1.59)O(0.16)N(0.116)S(0.003) for 500 degrees C. Bio-oils mainly contained oleic acid, 1H-indole, 2,3,5-trimethoxy toluene, toluene, (Z)-9-octadecanamide, psoralene, phenol and phenol derivatives at all pyrolysis temperatures. Both non-aromatic and aromatic hydrocarbon compounds were determined in water phase of liquid product by Headspace-GC analysis. The heating values of bio-chars were found to be similar (24MJkg(-1)) at all pyrolysis temperatures.

  17. Predicting rapeseed oil content with near-infrared spectroscopy

    Directory of Open Access Journals (Sweden)

    Roberta Rossato

    2013-12-01

    Full Text Available The objective of this work was to establish a calibration equation and to estimate the efficiency of near-infrared reflectance (NIR spectroscopy for evaluating rapeseed oil content in Southern Brazil. Spectral data from 124 half-sib families were correlated with oil contents determined by the chemical method. The accuracy of the equation was verified by coefficient of determination (R² of 0.92, error of calibration (SEC of 0.78, and error of performance (SEP of 1.22. The oil content of ten genotypes, which were not included in the calibration with NIR, was similar to the one obtained by the standard chemical method. NIR spectroscopy is adequate to differentiate oil content of rapeseed genotypes.

  18. DNA probes for detection of copper resistance genes in Xanthomonas campestris pv. Vesicatoria

    Energy Technology Data Exchange (ETDEWEB)

    Garde, S.; Bender, C.L. (Oklahoma State Univ., Stillwater (USA))

    1991-08-01

    The copper resistance (Cu{sup r}) genes encoded on pXV10A, a 190-kb plasmid in Xanthomonas campestris pv. vesicatoria XV10, were isolated on a 44-kb cosmid clone designated pCuR1. Tn5 mutagenesis of pCuR1 indicated that a 4.0-kb region was required for copper resistance. Three restriction fragments located within the 4.0-kb region demonstrated high specificity for the Cu{sup r} genes present in X. campestris pv. vesicatoria and will be useful in monitoring the presence of these genes in the environment.

  19. DNA probes for detection of copper resistance genes in Xanthomonas campestris pv. vesicatoria.

    OpenAIRE

    Garde, S; Bender, C L

    1991-01-01

    The copper resistance (Cur) genes encoded on pXV10A, a 190-kb plasmid in Xanthomonas campestris pv. vesicatoria XV10, were isolated on a 44-kb cosmid clone designated pCuR1. Tn5 mutagenesis of pCuR1 indicated that a 4.0-kb region was required for copper resistance. Three restriction fragments located within the 4.0-kb region demonstrated high specificity for the Cur genes present in X. campestris pv. vesicatoria and will be useful in monitoring the presence of these genes in the environment.

  20. DNA probes for detection of copper resistance genes in Xanthomonas campestris pv. vesicatoria.

    Science.gov (United States)

    Garde, S; Bender, C L

    1991-08-01

    The copper resistance (Cur) genes encoded on pXV10A, a 190-kb plasmid in Xanthomonas campestris pv. vesicatoria XV10, were isolated on a 44-kb cosmid clone designated pCuR1. Tn5 mutagenesis of pCuR1 indicated that a 4.0-kb region was required for copper resistance. Three restriction fragments located within the 4.0-kb region demonstrated high specificity for the Cur genes present in X. campestris pv. vesicatoria and will be useful in monitoring the presence of these genes in the environment.

  1. Assessing transport susceptibility of rapeseed meal fractionation products

    Directory of Open Access Journals (Sweden)

    Milena Bojanowska

    2016-09-01

    Full Text Available Background: Having considered increasing production of liquid and solid biofuels from rapeseed and bearing in mind its stable and unquestionable position in  the food and animal feed industries, a rational approach towards technologically and logistically efficient utilization of by-products from rapeseed processing is required. The aim of the research presented in the article is to assess the transport susceptibility of rapeseed meal fractions, varying according to particle size and chemical composition. Methods: Resistance to changes stimulating self-heating has been assumed as the main criterion of transport susceptibility. The following diagnostic variables have been experimentally determined: total protein, crude fat and crude fiber content, porosity, and water activity in the fraction of examined meal. In order to organize a set of particles and to indicate their optimal applications according to criteria chosen with regard to both  utilization and transportation, two aggregate indicators have been calculated. Results: It has been proved that medium-sized particle fractions (0.075-0.4 mm exhibit the lowest transport susceptibility, whereas the those with the largest granulations (>3 mm -have the highest. One significant relationship is the decline of feeding value and concurrent increase in the transport susceptibility of meal fractions, which in practice means that those fractions least-favoured by the animal feed industry can be least cumbersome to transport. Conclusions: It has been suggested that there should be a division of rapeseed meal into two products with different applications and different transport susceptibility. The fractioning of meal can bring numerous, measurable benefits for the meal industry and logistics processes for solid biofuels, where storage and transport properties have considerable importance, alongside commodity price and transport costs.

  2. Development and validation of a duplex real-time PCR assay for the simultaneous detection of three mustard species (Sinapis alba, Brassica nigra and Brassica juncea) in food.

    Science.gov (United States)

    Palle-Reisch, Monika; Cichna-Markl, Margit; Hochegger, Rupert

    2014-06-15

    The paper presents a duplex real-time PCR assay for the simultaneous detection of three potentially allergenic mustard species commonly used in food: white mustard (Sinapis alba), black mustard (Brassica nigra) and brown mustard (Brassica juncea). White mustard is detected in the "green" and black/brown mustard in the "yellow" channel. The duplex real-time PCR assay does not show cross-reactivity with other Brassicaceae species including broccoli, cauliflower, radish and rapeseed. Low cross-reactivities (difference in the Ct value ⩾ 11.91 compared with the positive control) were obtained with cumin, fenugreek, ginger, rye and turmeric. When applying 500 ng DNA per PCR tube, the duplex real-time PCR assay allowed the detection of white, black and brown mustard in brewed model sausages down to a concentration of 5mg/kg in 10 out of 10 replicates. The duplex real-time PCR assay was applied to verify correct labelling of commercial foodstuffs. Copyright © 2013 Elsevier Ltd. All rights reserved.

  3. Biosorption of lead ions from aqueous effluents by rapeseed biomass.

    Science.gov (United States)

    Morosanu, Irina; Teodosiu, Carmen; Paduraru, Carmen; Ibanescu, Dumitrita; Tofan, Lavinia

    2017-10-25

    Lead, as well as other heavy metals, is regarded as priority pollutant due to its non-biodegradability, toxicity and persistence in the environment. In this study, rapeseed biomass was used in the biosorption of Pb(II) ions in batch and dynamic conditions, as well as with tests for industrial wastewater. The influence of initial concentration (5-250mg/L), pH and contact time (0.5-6h) was investigated. The kinetic data modeling resulted in good correlations with the pseudo-second order and intraparticle diffusion models. The maximum sorption capacities of Pb(II) were 18.35, 21.29 and 22.7mg/L at 4, 20 and 50°C, respectively. Thermodynamic parameters indicated the spontaneity and endothermic nature of lead biosorption on rapeseed biomass. The biosorption mechanism involves both physical and chemical interactions. The breakthrough curves at 50 and 100mg/L were determined and evaluated under dynamic conditions. The breakthrough time lowered with increasing the influent Pb(II) concentration. The experimental data obtained from fixed-bed column tests were well fitted by Thomas and Yoon-Nelson models. The calculated sorption capacities were in good agreement with the uptake capacity of Langmuir model. The applicability of rapeseed to be used as a sorbent for Pb(II) ions from real wastewater was tested, and Pb(II) removal efficiency of 94.47% was obtained. Copyright © 2016 Elsevier B.V. All rights reserved.

  4. Genome-Wide Identification, Evolutionary and Expression Analyses of the GALACTINOL SYNTHASE Gene Family in Rapeseed and Tobacco

    Directory of Open Access Journals (Sweden)

    Yonghai Fan

    2017-12-01

    Full Text Available Galactinol synthase (GolS is a key enzyme in raffinose family oligosaccharide (RFO biosynthesis. The finding that GolS accumulates in plants exposed to abiotic stresses indicates RFOs function in environmental adaptation. However, the evolutionary relationships and biological functions of GolS family in rapeseed (Brassica napus and tobacco (Nicotiana tabacum remain unclear. In this study, we identified 20 BnGolS and 9 NtGolS genes. Subcellular localization predictions showed that most of the proteins are localized to the cytoplasm. Phylogenetic analysis identified a lost event of an ancient GolS copy in the Solanaceae and an ancient duplication event leading to evolution of GolS4/7 in the Brassicaceae. The three-dimensional structures of two GolS proteins were conserved, with an important DxD motif for binding to UDP-galactose (uridine diphosphate-galactose and inositol. Expression profile analysis indicated that BnGolS and NtGolS genes were expressed in most tissues and highly expressed in one or two specific tissues. Hormone treatments strongly induced the expression of most BnGolS genes and homologous genes in the same subfamilies exhibited divergent-induced expression. Our study provides a comprehensive evolutionary analysis of GolS genes among the Brassicaceae and Solanaceae as well as an insight into the biological function of GolS genes in hormone response in plants.

  5. Optimización del proceso de obtención de biodiesel a partir de colza silvestre (Brassica Campestris

    Directory of Open Access Journals (Sweden)

    Héctor Ramírez

    2012-01-01

    Full Text Available Los objetivos de esta investigación fueron , optimizar el rendimiento de biodiesel a partir del aceite de colza silvestre en función de la relación molar metanol/aceite, la concentración de catalizadores homogéneos NaOH y KOH, te mperatura y tiempo de transesterificación a través de la metodología de superficie respuesta, y determinar las características fisicoquímicas del biodiesel obtenido en condiciones optimizadas. Fue aplic ado un diseño de Plackett y Burman (PB12 para la etap a d e screening y un diseño compuesto central rotacional (DCCR para la optimización final. Las condiciones que maximizan el r endimiento de biodiesel (77.8 % se obtuvieron a concentraciones de 0 – 0.2 % de NaOH y de 0.4 a 0.6 % de KOH , con tiempos de 77 a 81 minutos, manteniendo constante la relación molar metanol/aceite en 6/1 y una temperatura de 60ºC. Las propiedades fisicoquímicas del biodiesel obtenido en condiciones optimizadas cumplen con las especificaciones técnicas dadas por la ASTM D6751 – 07 y EN14214.

  6. Influence of heat stress on leaf morphology and nitrogen–carbohydrate metabolisms in two wucai (Brassica campestris L. genotypes

    Directory of Open Access Journals (Sweden)

    Lingyun Yuan

    2017-06-01

    Full Text Available Heat stress is a major environmental stress that limits plant growth and yield worldwide. The present study was carried out to explore the physiological mechanism of heat tolerant to provide the theoretical basis for heat-tolerant breeding. The changes of leaf morphology, anatomy, nitrogen assimilation, and carbohydrate metabolism in two wucai genotypes (WS-1, heat tolerant; WS-6, heat sensitive grown under heat stress (40°C/30°C for 7 days were investigated. Our results showed that heat stress hampered the plant growth and biomass accumulation in certain extent in WS-1 and WS-6. However, the inhibition extent of WS-1 was significantly smaller than WS-6. Thickness of leaf lamina, upper epidermis, and palisade mesophyll were increased by heat in WS-1, which might be contributed to the higher assimilation of photosynthates. During nitrogen assimilation, WS-1 possessed the higher nitrogen-related metabolic enzyme activities, including nitrate reductase (NR, glutamine synthetase (GS, glutamate synthase (GOGAT, and glutamate dehydrogenase (GDH, which were reflected by higher photosynthetic nitrogen-use efficiency (PNUE with respect to WS-6. The total amino acids level had no influence in WS-1, whereas it was reduced in WS-6 by heat. And the proline contents of both wucai genotypes were all increased to respond the heat stress. Additionally, among all treatments, the total soluble sugar content of WS-1 by heat got the highest level, including higher contents of sucrose, fructose, and starch than those of WS-6. Moreover, the metabolism efficiency of sucrose to starch in WS-1 was greater than WS-6 under heat stress, proved by higher activities of sucrose phosphate synthase (SPS, sucrose synthase (SuSy, acid invertase (AI, and amylase. These results demonstrated that leaf anatomical alterations resulted in higher nitrogen and carbon assimilation in heat-tolerant genotype WS-1, which exhibited a greater performance to resist heat stress.

  7. Stereoselective uptake and distribution of the chiral neonicotinoid insecticide, Paichongding, in Chinese pak choi (Brassica campestris ssp. chinenesis)

    Energy Technology Data Exchange (ETDEWEB)

    Wang, Haiyan; Yang, Zhen; Liu, Ruyang; Fu, Qiuguo; Zhang, Sufen; Cai, Zhiqiang; Li, Juying; Zhao, Xiaojun [Institute of Nuclear Agricultural Sciences, Key Laboratory of Nuclear Agricultural Sciences of Ministry of Agriculture and Zhejiang Province, Zhejiang University, Hangzhou 310029 (China); Ye, Qingfu, E-mail: qfye@zju.edu.cn [Institute of Nuclear Agricultural Sciences, Key Laboratory of Nuclear Agricultural Sciences of Ministry of Agriculture and Zhejiang Province, Zhejiang University, Hangzhou 310029 (China); Wang, Wei [Institute of Nuclear Agricultural Sciences, Key Laboratory of Nuclear Agricultural Sciences of Ministry of Agriculture and Zhejiang Province, Zhejiang University, Hangzhou 310029 (China); Li, Zhong, E-mail: lizhong@ecust.edu.cn [School of Pharmacy, East China University of Science and Technology, 130 Meilong Road, Shanghai 200237 (China)

    2013-11-15

    Highlights: • Absorption of foliar applied Paichongding by pak choi was not stereoselective. • Foliar uptake and downward transport of Paichongding were both found in pak choi. • Enantioselective and epimer-selective root uptake were observed for Paichongding. • Foliage/root uptake showed diastereoselective transport of Paichongding epimers. • The SR and RS are more easily taken up by roots and accumulated in edible parts. -- Abstract: Neonicotinoid chiral insecticidal Paichongding is a promising substitute for the widely used imidacloprid. Four stereoisomers of Paichongding, 5R,7R, 5S,7S, 5S,7R and 5R,7S, were employed in both foliage and roots of Chinese pak choi to investigate their stereoselective uptake and distribution in pak choi. Results showed that after foliar application, no stereoselective absorption into pak-choi plants was observed among the enantiomers. Total absorptions were 35.40% of the applied amount for 5R,7R, 36.66% for 5S,7S, 36.80% for 5S,7R and 38.20% for 5R,7S at 96 HAT. The translocation of the four absorbed stereoisomers within pak choi occurred both acropetally and basipetally and the transport of {sup 14}C from enantiomers 5R,7R and 5S,7S were significantly higher than for 5R,7S and 5S,7R. Significant stereoselective translocation inside plants was observed between Paichongding epimers. Total root uptake reached 16.49–19.85% for 5R,7R and 5S,7S, and 24.57–28.82% for 5S,7R and 5R,7S at 144 HAT. Both enantioselective and diastereoselective root uptake into pak-choi occurred between the four stereoisomers. The 5R,7S and 5S,7R enantiomers were more readily uptaken by the roots than 5R,7R and 5S,7S and accumulated in the edible leaves. These results will help to develop an understanding of Paichongding using only the target-active enantiomer of pesticides.

  8. Determination of Flowering Phenology, Number of Flowers, Nectar and Pollen Potential of Oil Rape (Brassica napus L., Plant in Black Sea Coastal Region

    Directory of Open Access Journals (Sweden)

    Necda Çankaya

    2017-11-01

    Full Text Available This research was carried out in 2011 and 2012 in order to determine the flowering phenology, number of flowers, nectar and pollen potential in the Samsun province of the oilseed rape (Brassica napus L., which is widely used in agriculture in our country. In the first year of the study (2011, it was determined that the rapeseed plant was in flower for 44 days, there were 2.694 flowers per plant, 1.89 kg/da nectar per day and 1330 kg/da pollen production. In the second year of the research (2012, it was revealed that the rapeseed plant was in flower for 39 days, there were 701 plants/flower in the plant, 0.38 kg/da nectar secreted daily and 331.57 kg/da pollen. According to the results of two years, the yield of rapeseed was found to be 41.5 days, the daily nectar production was 0.23 mg/flower/day, the nectar dry matter level was 20.25% and the pollen production was 0.48 mg/flower/day. In Samsun province, it was determined that rapeseed plants flowered before the flowering of many plants in the vicinity in the early spring, and provided honey bees, Apis mellifera L., and many other honey bees, nectar and pollen. It has been demonstrated that the cultivation of rapeseed is cultivated in the early spring, and it can be a convenient source of food for honey bees and other dusty insects.

  9. Cytological and comparative proteomic analyses on male sterility in Brassica napus L. induced by the chemical hybridization agent monosulphuron ester sodium.

    Directory of Open Access Journals (Sweden)

    Yufeng Cheng

    Full Text Available Male sterility induced by a chemical hybridization agent (CHA is an important tool for utilizing crop heterosis. Monosulphuron ester sodium (MES, a new acetolactate synthase-inhibitor herbicide belonging to the sulphonylurea family, has been developed as an effective CHA to induce male sterility in rapeseed (Brassica napus L.. To understand MES-induced male sterility in rapeseed better, comparative cytological and proteomic analyses were conducted in this study. Cytological analysis indicated that defective tapetal cells and abnormal microspores were gradually generated in the developing anthers of MES-treated plants at various development stages, resulting in unviable microspores and male sterility. A total of 141 differentially expressed proteins between the MES-treated and control plants were revealed, and 131 of them were further identified by MALDI-TOF/TOF MS. Most of these proteins decreased in abundance in tissues of MES-treated rapeseed plants, and only a few increased. Notably, some proteins were absent or induced in developing anthers after MES treatment. These proteins were involved in several processes that may be crucial for tapetum and microspore development. Down-regulation of these proteins may disrupt the coordination of developmental and metabolic processes, resulting in defective tapetum and abnormal microspores that lead to male sterility in MES-treated plants. Accordingly, a simple model of CHA-MES-induced male sterility in rapeseed was established. This study is the first cytological and dynamic proteomic investigation on CHA-MES-induced male sterility in rapeseed, and the results provide new insights into the molecular events of male sterility.

  10. Cytological and comparative proteomic analyses on male sterility in Brassica napus L. induced by the chemical hybridization agent monosulphuron ester sodium.

    Science.gov (United States)

    Cheng, Yufeng; Wang, Qian; Li, Zhanjie; Cui, Jianmin; Hu, Shengwu; Zhao, Huixian; Chen, Mingshun

    2013-01-01

    Male sterility induced by a chemical hybridization agent (CHA) is an important tool for utilizing crop heterosis. Monosulphuron ester sodium (MES), a new acetolactate synthase-inhibitor herbicide belonging to the sulphonylurea family, has been developed as an effective CHA to induce male sterility in rapeseed (Brassica napus L.). To understand MES-induced male sterility in rapeseed better, comparative cytological and proteomic analyses were conducted in this study. Cytological analysis indicated that defective tapetal cells and abnormal microspores were gradually generated in the developing anthers of MES-treated plants at various development stages, resulting in unviable microspores and male sterility. A total of 141 differentially expressed proteins between the MES-treated and control plants were revealed, and 131 of them were further identified by MALDI-TOF/TOF MS. Most of these proteins decreased in abundance in tissues of MES-treated rapeseed plants, and only a few increased. Notably, some proteins were absent or induced in developing anthers after MES treatment. These proteins were involved in several processes that may be crucial for tapetum and microspore development. Down-regulation of these proteins may disrupt the coordination of developmental and metabolic processes, resulting in defective tapetum and abnormal microspores that lead to male sterility in MES-treated plants. Accordingly, a simple model of CHA-MES-induced male sterility in rapeseed was established. This study is the first cytological and dynamic proteomic investigation on CHA-MES-induced male sterility in rapeseed, and the results provide new insights into the molecular events of male sterility.

  11. Identification of Candidate Genes for Seed Glucosinolate Content Using Association Mapping in Brassica napus L.

    Science.gov (United States)

    Qu, Cun-Min; Li, Shi-Meng; Duan, Xiu-Jian; Fan, Jin-Hua; Jia, Le-Dong; Zhao, Hui-Yan; Lu, Kun; Li, Jia-Na; Xu, Xin-Fu; Wang, Rui

    2015-11-18

    Rapeseed contains glucosinolates, a toxic group of sulfur-containing glucosides, which play critical roles in defense against herbivores and microbes. However, the presence of glucosinolates in rapeseed reduces the value of the meal as feed for livestock. We performed association mapping of seed glucosinolate (GS) content using the 60K Brassica Infinium single nucleotide polymorphism (SNP) array in 520 oilseed rape accessions. A total of 11 peak SNPs significantly associated with GS content were detected in growing seasons of 2013 and 2014 and were located on B. napus chromosomes A08, A09, C03, and C09, respectively. Two associated regions of GS content covered by these markers were further verified, and three B. napus homologous genes involved in the biosynthesis and accumulation of GS were identified. These genes were multigene family members and were distributed on different chromosomes. Moreover, two genes (BnGRT2 and BnMYB28) associated with GS content were validated by the qRT-PCR analysis of their expression profiles. The further identification and functionalization of these genes will provide useful insight into the mechanism underlying GS biosynthesis and allocation in B. napus, and the associated SNPs markers could be helpful for molecular maker-assisted breeding for low seed GS in B. napus.

  12. Identification of Candidate Genes for Seed Glucosinolate Content Using Association Mapping in Brassica napus L.

    Directory of Open Access Journals (Sweden)

    Cun-Min Qu

    2015-11-01

    Full Text Available Rapeseed contains glucosinolates, a toxic group of sulfur-containing glucosides, which play critical roles in defense against herbivores and microbes. However, the presence of glucosinolates in rapeseed reduces the value of the meal as feed for livestock. We performed association mapping of seed glucosinolate (GS content using the 60K Brassica Infinium single nucleotide polymorphism (SNP array in 520 oilseed rape accessions. A total of 11 peak SNPs significantly associated with GS content were detected in growing seasons of 2013 and 2014 and were located on B. napus chromosomes A08, A09, C03, and C09, respectively. Two associated regions of GS content covered by these markers were further verified, and three B. napus homologous genes involved in the biosynthesis and accumulation of GS were identified. These genes were multigene family members and were distributed on different chromosomes. Moreover, two genes (BnGRT2 and BnMYB28 associated with GS content were validated by the qRT-PCR analysis of their expression profiles. The further identification and functionalization of these genes will provide useful insight into the mechanism underlying GS biosynthesis and allocation in B. napus, and the associated SNPs markers could be helpful for molecular maker-assisted breeding for low seed GS in B. napus.

  13. Phenolic Compounds in Brassica Vegetables

    Directory of Open Access Journals (Sweden)

    Pablo Velasco

    2010-12-01

    Full Text Available Phenolic compounds are a large group of phytochemicals widespread in the plant kingdom. Depending on their structure they can be classified into simple phenols, phenolic acids, hydroxycinnamic acid derivatives and flavonoids. Phenolic compounds have received considerable attention for being potentially protective factors against cancer and heart diseases, in part because of their potent antioxidative properties and their ubiquity in a wide range of commonly consumed foods of plant origin. The Brassicaceae family includes a wide range of horticultural crops, some of them with economic significance and extensively used in the diet throughout the world. The phenolic composition of Brassica vegetables has been recently investigated and, nowadays, the profile of different Brassica species is well established. Here, we review the significance of phenolic compounds as a source of beneficial compounds for human health and the influence of environmental conditions and processing mechanisms on the phenolic composition of Brassica vegetables.

  14. Predation of Indianmeal moth larvae by Lyctocoris campestris(F.) (Hemiptera: Anthocoridae) in different stored commodities

    Science.gov (United States)

    Predation rates for the anthocorid predator Lyctocoris campestris (F.) against varying densities of late-instar Plodia interpunctello (Hubner) were compared in whole corn, whole wheat, or folled oat stored commodities. More prey were attacked in corn and wheat than in oats, and female predators gene...

  15. Host Genotype and Hypersensitive Reaction Influence Population Levels of Xanthomonas campestris pv. vitians in Lettuce.

    Science.gov (United States)

    Bull, Carolee T; Gebben, Samantha J; Goldman, Polly H; Trent, Mark; Hayes, Ryan J

    2015-03-01

    Dynamics of population sizes of Xanthomonas campestris pv. vitians inoculated onto or into lettuce leaves were monitored on susceptible and resistant cultivars. In general, population growth was greater for susceptible (Clemente, Salinas 88, Vista Verde) than resistant (Batavia Reine des Glaces, Iceberg, Little Gem) cultivars. When spray-inoculated or infiltrated, population levels of X. campestris pv. vitians were consistently significantly lower on Little Gem than on susceptible cultivars, while differences in the other resistant cultivars were not consistently statistically significant. Populations increased at an intermediate rate on cultivars Iceberg and Batavia Reine des Glaces. There were significant positive correlations between bacterial concentration applied and disease severity for all cultivars, but bacterial titer had a significantly greater influence on disease severity in the susceptible cultivars than in Little Gem and an intermediate influence in Iceberg and Batavia Reine des Glaces. Infiltration of X. campestris pv. vitians strains into leaves of Little Gem resulted in an incompatible reaction, whereas compatible reactions were observed in all other cultivars. It appears that the differences in the relationship between population dynamics for Little Gem and the other cultivars tested were due to the hypersensitive response in cultivar Little Gem. These findings have implications for disease management and lettuce breeding because X. campestris pv. vitians interacts differently with cultivars that differ for resistance mechanisms.

  16. Aspects of quantitative resistance to Xanthomonas campestris pv. oryzae in rice

    NARCIS (Netherlands)

    Koch, M.F.

    1990-01-01

    Quantitative resistance (QR) toXanthomonas campestris pv. oryzae (Xco), the causal organism of bacterial blight in rice, is evident as reduced lesion length and slowed lesion development relative

  17. Host genotype and hypersensitive reaction influence population levels of Xanthomonas campestris pv. vitians in lettuce

    Science.gov (United States)

    Population dynamics of Xanthomonas campestris pv. vitians spray inoculated on or infiltrated into lettuce leaves were monitored on cultivars that were well characterized for resistance or susceptibility to the pathogen. In general, population growth was greater for susceptible (Clemente, Salinas 88,...

  18. Use of bioluminescence for detection of genetically engineered microorganisms released into the environment. [Xanthomonas campestris

    Energy Technology Data Exchange (ETDEWEB)

    Shaw, J.J.; Dane, F.; Geiger, D.; Kloepper, J.W. (Auburn Univ., AL (United States))

    1992-01-01

    The persistence and movement of strain JS414 of Xanthomonas campestris pv. campestris, which was genetically engineered to bioluminesce, were monitored during a limited field introduction. Bioluminescence and traditional dilution plate counts were determined. Strain JS414 was applied to cabbage plants and surrounding soil by mist inoculation, by wound inoculation, by scattering infested debris among plants, and by incorporating bacteria into the soil. Bioluminescent X. campestris pv. campestris was detected in plant samples and in the rhizosphere up to 6 weeks after inoculation. Movement to uninoculated plants was detected on one occasion, but movement from the immediate release area was not detected. Strain JS414 was detected in soil samples beneath mist- and wound-inoculated plants only at intentionally infested locations and in aerial samples only on the day of inoculation. The authors bioluminescence methods proved to be as sensitive as plating methods for detecting the genetically engineered microorganisms in environmental samples. Their results demonstrate that transgenic incorporation of the luxCDABE operon provides a non-labor-intensive, sensitive detection method for monitoring genetically engineered microorganisms in nature.

  19. Evaluation of rapeseed genotypes for yield and oil quality under ...

    African Journals Online (AJOL)

    PRECIOUS

    2009-12-15

    Dec 15, 2009 ... The per capita oil consumption increasing day by day is impaired by the growth rate of more than 3%. Hence there is no way, but to improve the oilseed production for getting self sufficiency in edible oils demand (Anonymous, 2007). The genus Brassica has over 150 species and repre- sented by 8 species ...

  20. valuation of rapeseed genotypes for yield and oil quality under ...

    African Journals Online (AJOL)

    , erucic acid (23.67 ìmol/g) and higher amounts of oleic acid (59.01%). Due to its high yield and oil quality, the genotype Siren is recommended for general cultivation in the area and further use in breeding programmes for Brassica napus.

  1. Different myrosinase and idioblast distribution in Arabidopsis and Brassica napus

    DEFF Research Database (Denmark)

    Andreasson, Erik; Jørgensen, Lise Bolt; Höglund, Anna-Stina

    2001-01-01

    Arabidopsis, Brassica napus, Myrosinase, Myrosinase Binding Protein, Glucosinolates, Myrosin Cell, Immunocytochemistry......Arabidopsis, Brassica napus, Myrosinase, Myrosinase Binding Protein, Glucosinolates, Myrosin Cell, Immunocytochemistry...

  2. Deciphering the Diploid Ancestral Genome of the Mesohexaploid Brassica rapa

    National Research Council Canada - National Science Library

    Feng Cheng; Terezie Mandáková; Jian Wu; Qi Xie; Martin A. Lysak; Xiaowu Wang

    2013-01-01

    .... The availability of several crucifer genome sequences, especially that of Chinese cabbage (Brassica rapa), enables study of the evolution of the mesohexaploid Brassica genomes from their diploid progenitors...

  3. Purification and protein composition of oil bodies from Brassica napus seeds

    Directory of Open Access Journals (Sweden)

    Jolivet Pascale

    2006-11-01

    Full Text Available Seed oil bodies are intracellular particles to store lipids as food reserves in oleaginous plants. Description of oil body-associated proteins of Arabidopsis thaliana has been recently reported whereas only few data are available in the case of rapeseed. Oil bodies have been prepared from two double-low varieties of Brassica napus seeds, a standard variety (Explus and an oleic variety (Cabriolet. Oil bodies have been purified using floatation technique in the successive presence of high salt concentration, detergent or urea in order to remove non-specifically trapped proteins. The integrity of the oil bodies has been verified and their size estimated. Their protein and fatty acid contents have been determined. The proteins composing these organelles were extracted, separated by denaturing gel electrophoresis, digested by trypsin and their peptides were subsequently analyzed by liquid chromatography-tandem mass spectrometry. Protein identification was performed using Arabidopsis thaliana protein sequence database and a collection of Expressed Sequence Tag (EST of Brassica napus generated from the framework of the French plant genomics programme “Genoplante”. This led to the identification of a limited number of proteins: eight oleosins showing a high similarity each other and representing up to 75% of oil body proteins, a 11 β hydroxysteroid dehydrogenase-like protein highly homologous to the same protein from A. thaliana, and only few contaminating proteins associated with myrosinase activity.

  4. Deletion of a Stay-Green Gene Associates with Adaptive Selection in Brassica napus.

    Science.gov (United States)

    Qian, Lunwen; Voss-Fels, Kai; Cui, Yixin; Jan, Habib U; Samans, Birgit; Obermeier, Christian; Qian, Wei; Snowdon, Rod J

    2016-12-05

    Chlorophyll levels provide important information about plant growth and physiological plasticity in response to changing environments. The stay-green gene NON-YELLOWING 1 (NYE1) is believed to regulate chlorophyll degradation during senescence, concomitantly affecting the disassembly of the light-harvesting complex and hence indirectly influencing photosynthesis. We identified Brassica napus accessions carrying an NYE1 deletion associated with increased chlorophyll content, and with upregulated expression of light-harvesting complex and photosynthetic reaction center (PSI and PSII) genes. Comparative analysis of the seed oil content of accessions with related genetic backgrounds revealed that the B. napus NYE1 gene deletion (bnnye1) affected oil accumulation, and linkage disequilibrium signatures suggested that the locus has been subject to artificial selection by breeding in oilseed B. napus forms. Comparative analysis of haplotype diversity groups (haplogroups) between three different ecotypes of the allopolyploid B. napus and its A-subgenome diploid progenitor, Brassica rapa, indicated that introgression of the bnnye1 deletion from Asian B. rapa into winter-type B. napus may have simultaneously improved its adaptation to cooler environments experienced by autumn-sown rapeseed. Copyright © 2016 The Author. Published by Elsevier Inc. All rights reserved.

  5. Genome-Wide Delineation of Natural Variation for Pod Shatter Resistance in Brassica napus

    Science.gov (United States)

    Raman, Harsh; Raman, Rosy; Kilian, Andrzej; Detering, Frank; Carling, Jason; Coombes, Neil; Diffey, Simon; Kadkol, Gururaj; Edwards, David; McCully, Margaret; Ruperao, Pradeep; Parkin, Isobel A. P.; Batley, Jacqueline; Luckett, David J.; Wratten, Neil

    2014-01-01

    Resistance to pod shattering (shatter resistance) is a target trait for global rapeseed (canola, Brassica napus L.), improvement programs to minimise grain loss in the mature standing crop, and during windrowing and mechanical harvest. We describe the genetic basis of natural variation for shatter resistance in B. napus and show that several quantitative trait loci (QTL) control this trait. To identify loci underlying shatter resistance, we used a novel genotyping-by-sequencing approach DArT-Seq. QTL analysis detected a total of 12 significant QTL on chromosomes A03, A07, A09, C03, C04, C06, and C08; which jointly account for approximately 57% of the genotypic variation in shatter resistance. Through Genome-Wide Association Studies, we show that a large number of loci, including those that are involved in shattering in Arabidopsis, account for variation in shatter resistance in diverse B. napus germplasm. Our results indicate that genetic diversity for shatter resistance genes in B. napus is limited; many of the genes that might control this trait were not included during the natural creation of this species, or were not retained during the domestication and selection process. We speculate that valuable diversity for this trait was lost during the natural creation of B. napus. To improve shatter resistance, breeders will need to target the introduction of useful alleles especially from genotypes of other related species of Brassica, such as those that we have identified. PMID:25006804

  6. GWAS, QTL mapping and gene expression analyses in Brassica napus reveal genetic control of branching morphogenesis.

    Science.gov (United States)

    He, Yajun; Wu, Daoming; Wei, Dayong; Fu, Ying; Cui, Yixin; Dong, Hongli; Tan, Chuandong; Qian, Wei

    2017-11-21

    Branch number is an important trait in plant architecture that can influence crop yield and quality in Brassica napus. Here, we detected the QTLs responsible for branch number in a DH population and its reconstructed F2 population over two years. Further, a GWAS research on branch number was performed using a panel of 327 accessions with 33186 genomic SNPs from the 60 K Brassica Illumina® Infinium SNP array. Through combining linkage analysis and association mapping, a new QTL was fine mapped onto C03. Subsequently, we tested the correlations between the SNP polymorphisms and mRNA expression levels of genes in the target interval to identify potential loci or genes that control branch number through expression. The results show that 4 SNP loci are associated with the corresponding gene expression levels, and one locus (BnaC03g63480D) exhibited a significant correlation between the phenotype variation and gene expression levels. Our results provide insights into the genetic basis for branching morphogenesis and may be valuable for optimizing architecture in rapeseed breeding.

  7. Direct nitrous oxide emissions from rapeseed in Germany

    Science.gov (United States)

    Fuß, Roland; Andres, Monique; Hegewald, Hannes; Kesenheimer, Katharina; Köbke, Sarah; Räbiger, Thomas; Suarez, Teresa; Stichnothe, Heinz; Flessa, Heiner

    2014-05-01

    The production of first generation biofuels has increased over the last decade in Germany. However, there is a strong public and scientific debate concerning ecological impact and sustainability of biofuel production. The EU Renewables Directive requires biofuels to save 35 % of GHG emissions compared to fossil fuels. Starting in 2017, 50 % mitigation of GHG emissions must be achieved. This presents challenges for production of biofuels from rapeseed, which is one of the major renewable resources used for fuel production. Field emissions of nitrous oxide (N2O) and GHG emissions during production of fertilizers contribute strongest to the GHG balance of rapeseed biofuel. Thus, the most promising GHG mitigation option is the optimization of nitrogen fertilization. Since 2012, field trials are conducted on five German research farms to quantify direct GHG emissions. The sites were selected to represent the main rapeseed production regions in Germany as well as climatic regions and soil types. Randomized plot designs were established, which allow monitoring (using manual chambers) impact of fertilization intensity on direct emissions and yield of the typical crop sequence (winter rape - winter wheat - winter barley). The effect of substituting mineral fertilizer with biogas digestate with and without addition of a nitrification inhibitor is also studied. Here we present results from the first cropping season. In 2013, annual direct N2O emissions as well as yield normalized N2O emissions from rape were low. This can be explained with the weather conditions as 2013 was characterized by a cold and long winter with snow until mid spring. As a result, emissions were smaller than predicted by the IPCC emission factors or by the Global Nitrous Oxide Calculator (GNOC). However, emissions still depend on nitrogen input.

  8. Identification of expressed genes during infection of chinese cabbage (Brassica rapa subsp. pekinensis) by Plasmodiophora brassicae

    DEFF Research Database (Denmark)

    Sundelin, Thomas; Jensen, Dan Funck; Lübeck, Mette

    2011-01-01

    and that the introns are small. These results show that it is possible to discover new P. brassicae genes from a mixed pool of both plant and pathogen cDNA. The results also revealed that some of the P. brassicae genes expressed in Chinese cabbage (Brassica rapa subsp. pekinensis) were identical to the genes expressed...

  9. Oxidation stability of rapeseed biodiesel/petroleum diesel blends

    DEFF Research Database (Denmark)

    Østerstrøm, Freja From; Anderson, James E.; Mueller, Sherry A.

    2016-01-01

    of the oxidation of a biodiesel fuel blend consisting of 30% (v/v) rapeseed methyl ester in petroleum diesel (B30) was conducted at 70 and 90 °C with three aeration rates. Oxidation rates increased with increasing temperature as indicated by decreases in induction period (Rancimat), concentrations of unsaturated......, and then decreased reflecting volatilization of fuel and volatile oxidation products. Peroxide concentration showed a peak that coincided with the most rapid rate of oxygen incorporation, acid formation, and polyunsaturated FAME degradation. Net oxygen incorporation exhibited a plateau at approximately 5-6 wt % O...

  10. Effect of topdressing with nitrogen and boron on the yield and quality of rapeseed

    Directory of Open Access Journals (Sweden)

    Ladislav Varga

    2010-01-01

    Full Text Available Field trials with winter rape (Brassica napus L. var. napus variety Rasmus were established in August in the years 2002–2004 at the experimental station in Kolíňany which belongs to the Slovak University of Agriculture in Nitra. In the experiments we explore the effect of supplementary spring topdressing of rape with nitrogen and boron in the BBCH 29–30 stage with regard to the yields of seeds and their qualitative parameters (TSW, content of oil and crude protein. In the experiment we applied DAM–390 (solution of ammonium nitrate and urea, 30% N at a rate of 30 kg N/ha and Humix Bór (humic acids + N, K, B at a rate of 0.240 kg B / ha. The different climate conditions in the respective years had a significant effect on yields of rapeseed and ranged as follows: 2003: 1.80–2.29 t / ha; 2004: 2.60–3.35 t / ha; 2005: 2.45–3.29 t / ha. The significant decrease in seed yields in the first year of the experiment was caused namely by the deficit in precipitation in January, February and June 2003 and high temperatures in May and June in the same year. In terms of the individual years and the three-year average the application of Humix Bór itself did not significantly improve the yield and qualitative parameters of seeds compared to the unfertilised control. In a three-year average the application of the N fertiliser alone or in combination with Humix Bór increased seed yields and the crude protein content by 22.4–30.7 % and 4.0–4.9 rel. %, respectively, compared to the unfertilised control. The significantly highest seed yields (2.98 t / ha were achieved when the plants were treated with a combination of nitrogen and Humix Bór as compared to all the other treatments (2.28–2.79 t / ha. The oil content in seeds increased significantly to 44.1% only when treated with a combined application of DAM–390 and Humix Bór as against the unfertilised control (42.8%. Fertilisation did not change

  11. Genomic Changes in Resynthesized Brassica napus and Their Effect on Gene Expression and Phenotype

    National Research Council Canada - National Science Library

    Robert T. Gaeta; J. Chris Pires; Federico Iniguez-Luy; Enrique Leon; Thomas C. Osborn

    2007-01-01

    .... We analyzed genetic, epigenetic, gene expression, and phenotypic changes in ∼50 resynthesized Brassica napus lines independently derived by hybridizing double haploids of Brassica oleracea and Brassica rapa...

  12. [Skin manifestations of toxic syndrome due to denatured rapeseed oil].

    Science.gov (United States)

    Fonseca, E

    2009-12-01

    This article offered an extensive description of the clinical and pathological features and time-course of the skin manifestations of toxic syndrome caused by denatured rapeseed oil, also known as toxic oil syndrome. This new condition occurred in Spain in 1981 and was due to the ingestion of rapeseed oil intended for industrial use that had been denatured with anilines and subsequently refined and sold fraudulently as olive oil. In total, 20,000 cases and 400 deaths were reported. The disease affected mainly women, particularly in the late stages. In the acute phase, the predominant skin manifestations were toxic-allergic rashes reminiscent of allergic urticaria in the dermatopathologic study. In approximately 25% of cases, the patients' skin subsequently took on an edematous appearance, with pigmentary abnormalities shown to be related to cutaneous mucinosis. Finally, a characteristic sclerodermatous condition would develop that tended to improve spontaneously. The constant presence of mast cells in all biopsies and the development of mastocytosis in several patients pointed to an important role for these cells in the pathogenesis of the condition. This was subsequently confirmed in other sclerodermatous processes. In 1989, eosinophilia-myalgia syndrome caused by toxins present in tryptophan food supplements was reported in the United States. This syndrome resembled toxic oil syndrome in many ways and demonstrated that mucinosis and toxic sclerodermatous processes do exist.

  13. Identification and expression analysis of BoMF25, a novel polygalacturonase gene involved in pollen development of Brassica oleracea.

    Science.gov (United States)

    Lyu, Meiling; Liang, Ying; Yu, Youjian; Ma, Zhiming; Song, Limin; Yue, Xiaoyan; Cao, Jiashu

    2015-06-01

    BoMF25 acts on pollen wall. Polygalacturonase (PG) is a pectin-digesting enzyme involved in numerous plant developmental processes and is described to be of critical importance for pollen wall development. In the present study, a PG gene, BoMF25, was isolated from Brassica oleracea. BoMF25 is the homologous gene of At4g35670, a PG gene in Arabidopsis thaliana with a high expression level at the tricellular pollen stage. Collinear analysis revealed that the orthologous gene of BoMF25 in Brassica campestris (syn. B. rapa) genome was probably lost because of genome deletion and reshuffling. Sequence analysis indicated that BoMF25 contained four classical conserved domains (I, II, III, and IV) of PG protein. Homology and phylogenetic analyses showed that BoMF25 was clustered in Clade F. The putative promoter sequence, containing classical cis-acting elements and pollen-specific motifs, could drive green fluorescence protein expression in onion epidermal cells. Quantitative RT-PCR analysis suggested that BoMF25 was mainly expressed in the anther at the late stage of pollen development. In situ hybridization analysis also indicated that the strong and specific expression signal of BoMF25 existed in pollen grains at the mature pollen stage. Subcellular localization showed that the fluorescence signal was observed in the cell wall of onion epidermal cells, which suggested that BoMF25 may be a secreted protein localized in the pollen wall.

  14. Variations in fatty acid composition, glucosinolate profile and some phyto chemical contents in selected oil seed rape (Brassica napus L.) cultivars

    Energy Technology Data Exchange (ETDEWEB)

    El-Din Saad El-Beltag, H.; Mohamed, A. A.

    2010-07-01

    Rapeseed (Brassica napus L.) is now the third most important source of edible oil in the world after soybean and palm oil. In this study seeds of five different rapeseed cultivars namely; pactol, silvo, topas, serw 4 and serw 6 were evaluated for their fatty acid composition, glucosinolate profile, amino acids, total tocopherols and phenolic content. Among all cultivars significant variability in fatty acids were observed. The oleic acid (C18:1) ranged from 56.31% to 58.67%, linoleic acid (C18:2) from 10.52% to 13.74%, {alpha}-linolenic acid (C18:3) from 8.83% to 10.32% and erucic acid (22:1) from 0.15% to 0.91%. The glucosinolate profile of rapeseed was also separated and identified using high-performance liquid chromatography. Small variations in the glucosinolate profile were observed among all tested cultivars; however, progoitrin and gluconapin were the major glucosinolate found. Additionally, silvo cultivar showed the highest total glucosinolate contents (5.97 {mu}mol/g dw). Generally, the contents of aspartic, glutamic, arginine and leucine were high, while the contents of tyrosine and isoleucine were low among all cultivars. For total tocopherols, the results indicated that both serw 6 and pactol cultivars had the highest total tocopherol contents (138.3 and 102.8 mg/100 g oil, respectively). Total phenolic contents varied from 28.0 to 35.4 mg/g dw. The highest total phenolic content was found in topas while the lowest value was detected in serw 6. These parameters; fatty acid contents, glucosinolate profile and amino acids together with total tocopherols and phenolic contents, could be taken into consideration by oilseed rape breeders as selection criteria for developing genotypes with modified seed quality traits in Brassica napus L. (Author)

  15. Sensitive and specific detection of Xanthomonas campestris pv. vesicatoria by PCR using pathovar-specific primers based on rhs family gene sequences.

    Science.gov (United States)

    Park, Dong Suk; Shim, Jae Kyung; Kim, Jung Sun; Lim, Chun Keun; Shrestha, Rosemary; Hahn, Jang Ho; Kim, Hong Gi

    2009-01-01

    The present study describes PCR assay to detect bacterial spot caused by Xanthomonas campestris pv. vesicatoria in pepper and tomato. One set of PCR primer was developed to amplify gene required for an rhs family gene homologous to rhsA, cell envelope biogenesis, outer membrane. Only a PCR product of a 517bp was produced in PCR reaction with the Xanthomonas campestris pv. vesicatoria (XCVF/XCVR) primer set. A specific, and highly sensitive and rapid PCR assay for the detection of X. campestris pv. vesicatoria was achieved. The protocol can be used as a reliable diagnostic tool for specific detection of X. campestris pv. vesicatoria in pepper or tomato.

  16. Studies of the spore walls of Agaricus bisporus and Agaricus campestris.

    Science.gov (United States)

    Mendoza, C G; Leal, J A; Novaes-Ledieu, M

    1979-01-01

    The composition and ultrastructure of spore walls of Agaricus bisporus and Agaricus campestris were compared by chemical and enzymatic assays and electron microscopy. Polymers of N-acetylglucosamine (chitin) and glucosamine (chitosan) were the major carbohydrate wall components of both species. The chitin to chitosan ratio in the spore walls of A. bisporus was about 0.38, while in A. campestris it was about 2.8 These polymers were associated with proteins, lipids (readily extractable and bound), melanin, and a low content of beta-glucan. The quantity of protein, total lipid, melanin, or beta-glucan was similar in spore walls of both species. With the electron microscopy, the spore walls appeared as two well-defined layers which may correspond to microfibrils of chitin and chitosan in which the electron-dense melanin was located in the external layer.

  17. Physicochemical and functional properties of rapeseed protein isolate: influence of antinutrient removal with acidified organic solvents from rapeseed meal.

    Science.gov (United States)

    Das Purkayastha, Manashi; Gogoi, Jyotchna; Kalita, Dipankar; Chattopadhyay, Pronobesh; Nakhuru, Khonamai Sewa; Goyary, Danswrang; Mahanta, Charu Lata

    2014-08-06

    The presence of antinutritional constituents in rapeseed protein products (RPI), such as polyphenols, phytates, allyl isothiocyanates, and glucosinolates, is a formidable constraint. The effect of antinutrient removal from rapeseed meal with an organic solvent mixture (methanol/acetone, 1:1 v/v, combined with an acid (hydrochloric, acetic, perchloric, trichloroacetic, phosphoric)) on the physicochemical and functional properties of RPI was investigated. The extraction resulted in a substantial reduction of antinutrients from RPI, especially polyphenols and phytates, with concomitant decreases in protein yield and solubility. Treatment harbored significant improvement in the degree of whiteness, which was highest in the perchloric acid case. Surface hydrophobicity and free sulfhydryl group of RPI changed considerably, with perchloric acid-treated samples showing higher values, whereas the disulfide content remarkably increased in trichloroacetic acid- and phosphoric acid-treated samples, signifying aggregation. Intrinsic emission fluorescence and FTIR spectra showed significant changes in proteins' tertiary and secondary conformations, and the changes were more pronounced in samples treated with higher concentrations of acids. No appreciable alteration appeared among the electrophoretic profiles of proteins from pristine meal and those treated with lower levels of acids. Interfacial surface properties of proteins were variably improved by the solvent extraction, whereas the converse was true for their extent of denaturation. The results suggest that the physicochemical and conformational properties of RPI are closely related to its functional properties.

  18. An analysis of growth factors of rapeseed at modern resource-saving technology

    Science.gov (United States)

    Filipova, M.; Zheleva, I.; Sulejmenova, N.; Abildaev, E.

    2017-10-01

    Nowadays the production of rapeseed has grown due to the variety of existing possibilities for its using. This calls the search for new, resource-saving technologies for its growing in Republic of Kazakhstan. For these new technologies it is needed to know which are the factors that influence the production of rapeseed and how each factor influence the production and the quality of this culture. The careful study of these factors is necessary for better understudying the process of the growing aimed increasing the yields and quantity of the rapeseed.

  19. Significant reductions in oil quality and lipid content of oilseed rape (Brassica napus L.) under climate change

    DEFF Research Database (Denmark)

    Namazkar, Shahla; Egsgaard, Helge; Frenck, Georg

    2015-01-01

    stearic acid, C 18:0. For example we found that in the two factor treatment, where elevated [CO2] and temperature were combined, the essential fatty acid omega-3, C18:3, decreased by 45% and oil content declined 10%.Total losses in fatty acid and oil yields would be even larger, when also considering...... fatty acids was changed for the worse. Facing this outlook, breeding for climate tolerant cultivars seems essential for oil yield and quality. (C) 2015 Published by Elsevier B.V......Despite of the potential importance to food and bioenergy purposes, effects from climate change on plant oil quality have hardly been characterized.On a global basis Brassica napus L., rapeseed or oilseed rape, is the second largest source of vegetable oil after soybean and the predominant oil crop...

  20. Significant reductions in oil quality and lipid content of oilseed rape (Brassica napus L.) under climate change

    DEFF Research Database (Denmark)

    Namazkar, Shahla; Egsgaard, Helge; Frenck, Georg

    2015-01-01

    found that in the two- factor treatment, where elevated [CO2] and temperature were combined, the essential fatty acid omega-3, C18:3, decreased by 45% and oil content declined 10%.Total losses in fatty acid and oil yields would be even larger, when also considering reported reductions in seed biomass....... Facing this outlook, breeding for climate tolerant cultivars seems essential for oil yield and quality.......Despite of the potential importance to food and bioenergy purposes, effects from climate change on plant oil quality have hardly been characterized.On a global basis Brassica napus L., rapeseed or oilseed rape, is the second largest source of vegetable oil after soybean and the predominant oil crop...

  1. Enhanced fructooligosaccharides and inulinase production by a Xanthomonas campestris pv. phaseoli KM 24 mutant.

    Science.gov (United States)

    Naidoo, Kameshnee; Ayyachamy, Manimaran; Permaul, Kugen; Singh, Suren

    2009-08-01

    Xanthomonas campestris pv phaseoli produced an extracellular endoinulinase (9.24 +/- 0.03 U mL(-1)) in an optimized medium comprising of 3% sucrose and 2.5% tryptone. X. campestris pv. phaseoli was further subjected to ethylmethanesulfonate mutagenesis and the resulting mutant, X. campestris pv. phaseoli KM 24 demonstrated inulinase production of 22.09 +/- 0.03 U mL(-1) after 18 h, which was 2.4-fold higher than that of the wild type. Inulinase production by this mutant was scaled up using sucrose as a carbon source in a 5-L fermenter yielding maximum volumetric (21,865 U L(-1) h(-1)) and specific (119,025 U g(-1) h(-1)) productivities of inulinase after 18 h with an inulinase/invertase ratio of 2.6. A maximum FOS production of 11.9 g L(-1) h(-1) and specific productivity of 72 g g(-1) h(-1) FOS from inulin were observed in a fermenter, when the mutant was grown on medium containing 3% inulin and 2.5% tryptone. The detection of mono- and oligosaccharides in inulin hydrolysates by TLC analysis indicated the presence of an endoinulinase. This mutant has potential for large-scale production of inulinase and fructooligosaccharides.

  2. Subgenome parallel selection is associated with morphotype diversification and convergent crop domestication in Brassica rapa and Brassica oleracea

    NARCIS (Netherlands)

    Cheng, Feng; Sun, Rifei; Hou, Xilin; Zheng, Hongkun; Zhang, Fenglan; Zhang, Yangyong; Liu, Bo; Liang, Jianli; Zhuang, Mu; Liu, Yunxia; Liu, Dongyuan; Wang, Xiaobo; Li, Pingxia; Liu, Yumei; Lin, Ke; Bucher, Johan; Zhang, Ningwen; Wang, Yan; Wang, Hui; Deng, Jie; Liao, Yongcui; Wei, Keyun; Zhang, Xueming; Fu, Lixia; Hu, Yunyan; Liu, Jisheng; Cai, Chengcheng; Zhang, Shujiang; Zhang, Shifan; Li, Fei; Zhang, Hui; Zhang, Jifang; Guo, Ning; Liu, Zhiyuan; Liu, Jin; Sun, Chao; Ma, Yuan; Zhang, Haijiao; Cui, Yang; Freeling, Micheal R.; Borm, Theo; Bonnema, Guusje; Wu, Jian; Wang, Xiaowu

    2016-01-01

    Brassica species, including crops such as cabbage, turnip and oilseed, display enormous phenotypic variation. Brassica genomes have all undergone a whole-genome triplication (WGT) event with unknown effects on phenotype diversification. We resequenced 199 Brassica rapa and 119 Brassica oleracea

  3. Brassica taxonomy based on nuclear restriction fragment length polymorphisms (RFLPs) : 3. Genome relationships in Brassica and related genera and the origin of B. oleracea and B. rapa (syn. campestns).

    Science.gov (United States)

    Song, K; Osborn, T C; Williams, P H

    1990-04-01

    RFLPs were used to study genome evolution and phylogeny in Brassica and related genera. Thirtyeight accessions, including 10 accessions of B. rapa (syn. campestris), 9 cultivated types of B. oleracea, 13 nine-chromosome wild brassicas related to B. oleracea, and 6 other species in Brassica and allied genera, were examined with more then 30 random genomic DNA probes, which identified RFLPs mapping to nine different linkage groups of the B. rapa genome. Based on the RFLP data, phylogenetic trees were constructed using the PAUP microcomputer program. Within B. rapa, accessions of pak choi, narinosa, and Chinese cabbage from East Asia constituted a group distinct from turnip and wild European populations, consistent with the hypothesis that B. rapa had two centers of domestication. A wild B. rapa accession from India was positioned in the tree between European types and East Asian types, suggesting an evolutionary pathway from Europe to India, then to South China. Cultivated B. oleracea morphotypes showed monophyletic origin with wild B. oleracea or B. alboglabra as possible ancestors. Various kales constitute a highly diverse group, and represent the primitive morphotypes of cultivated B. oleracea from which cabbage, broccoli, cauliflower, etc. probably have evolved. Cauliflower was found to be closely related to broccoli, whereas cabbage was closely related to leafy kales. A great diversity existed among the 13 collections of nine-chromosome wild brassicas related to B. oleracea, representing various taxonomic states from subspecies to species. Results from these studies suggested that two basic evolutionary pathways exist for the diploid species examined. One pathway gave rise to B. fruticulosa, B. nigra, and Sinapis arvensis, with B. adpressa or a close relative as the initial ancestor. Another pathway gave rise to B. oleracea and B. rapa, with Diplotaxis erucoides or a close relative as the initial ancestor. Raphanus sativus and Eruca sativus represented

  4. Fatty acid DSF binds and allosterically activates histidine kinase RpfC of phytopathogenic bacterium Xanthomonas campestris pv. campestris to regulate quorum-sensing and virulence.

    Directory of Open Access Journals (Sweden)

    Zhen Cai

    2017-04-01

    Full Text Available As well as their importance to nutrition, fatty acids (FA represent a unique group of quorum sensing chemicals that modulate the behavior of bacterial population in virulence. However, the way in which full-length, membrane-bound receptors biochemically detect FA remains unclear. Here, we provide genetic, enzymological and biophysical evidences to demonstrate that in the phytopathogenic bacterium Xanthomonas campestris pv. campestris, a medium-chain FA diffusible signal factor (DSF binds directly to the N-terminal, 22 amino acid-length sensor region of a receptor histidine kinase (HK, RpfC. The binding event remarkably activates RpfC autokinase activity by causing an allosteric change associated with the dimerization and histidine phosphotransfer (DHp and catalytic ATP-binding (CA domains. Six residues were found essential for sensing DSF, especially those located in the region adjoining to the inner membrane of cells. Disrupting direct DSF-RpfC interaction caused deficiency in bacterial virulence and biofilm development. In addition, two amino acids within the juxtamembrane domain of RpfC, Leu172 and Ala178, are involved in the autoinhibition of the RpfC kinase activity. Replacements of them caused constitutive activation of RpfC-mediated signaling regardless of DSF stimulation. Therefore, our results revealed a biochemical mechanism whereby FA activates bacterial HK in an allosteric manner, which will assist in future studies on the specificity of FA-HK recognition during bacterial virulence regulation and cell-cell communication.

  5. Two non-consensus Clp binding sites are involved in upregulation of the gum operon involved in xanthan polysaccharide synthesis in Xanthomonas campestris pv. campestris.

    Science.gov (United States)

    Chen, Chih-Hua; Lin, Nien-Tsung; Hsiao, Yi-Min; Yang, Chiou-Ying; Tseng, Yi-Hsiung

    2010-09-01

    Biosynthesis of xanthan polysaccharide, a virulence factor of phytopathogenic Xanthomonas campestris pv. campestris (Xcc), involves the gum operon and the cyclic AMP receptor protein (CRP) homologue Clp. Clp was shown to have the same DNA binding specificity as the CRP at positions 5, 6, and 7 (GTG motif) of the left arm. Therefore, Clp binding sites (CBSs) have typically been identified by pattern searching of the Xcc genome using the consensus CRP binding sequence. Here, results of a reporter assay and electrophoretic mobility shift assay suggest that Clp upregulates the gum operon by binding to two non-consensus sites, in which a more conserved right arm may compensate for the lack of conservation in the left arm, a high GC content in the central region (6 bp) may be important for binding, and binding may be enhanced if the GC-rich central region is palindromic. These suggest that atypical CBSs exist in Xcc promoters and that Clp, while retaining the capacity to bind typical CBSs, has evolved to bind atypical CBS because: 1) Clp shares only moderate homology with the CRP and is modulated by cyclic di-GMP; and 2) Xcc has a higher GC content (65%) than Escherichia coli (50%). Copyright 2010 Elsevier Masson SAS. All rights reserved.

  6. Conformational changes associated with the binding of zinc acetate at the putative active site of XcTcmJ, a cupin from Xanthomonas campestris pv. campestris.

    Science.gov (United States)

    Axelrod, Herbert L; Kozbial, Piotr; McMullan, Daniel; Krishna, S Sri; Miller, Mitchell D; Abdubek, Polat; Acosta, Claire; Astakhova, Tamara; Carlton, Dennis; Caruthers, Jonathan; Chiu, Hsiu Ju; Clayton, Thomas; Deller, Marc C; Duan, Lian; Elias, Ylva; Feuerhelm, Julie; Grzechnik, Slawomir K; Grant, Joanna C; Han, Gye Won; Jaroszewski, Lukasz; Jin, Kevin K; Klock, Heath E; Knuth, Mark W; Kumar, Abhinav; Marciano, David; Morse, Andrew T; Murphy, Kevin D; Nigoghossian, Edward; Okach, Linda; Oommachen, Silvya; Paulsen, Jessica; Reyes, Ron; Rife, Christopher L; Tien, Henry J; Trout, Christina V; van den Bedem, Henry; Weekes, Dana; White, Aprilfawn; Xu, Qingping; Zubieta, Chloe; Hodgson, Keith O; Wooley, John; Elsliger, Marc André; Deacon, Ashley M; Godzik, Adam; Lesley, Scott A; Wilson, Ian A

    2010-10-01

    In the plant pathogen Xanthomonas campestris pv. campestris, the product of the tcmJ gene, XcTcmJ, encodes a protein belonging to the RmlC family of cupins. XcTcmJ was crystallized in a monoclinic space group (C2) in the presence of zinc acetate and the structure was determined to 1.6 Å resolution. Previously, the apo structure has been reported in the absence of any bound metal ion [Chin et al. (2006), Proteins, 65, 1046-1050]. The most significant difference between the apo structure and the structure of XcTcmJ described here is a reorganization of the binding site for zinc acetate, which was most likely acquired from the crystallization solution. This site is located in the conserved metal ion-binding domain at the putative active site of XcTcmJ. In addition, an acetate was also bound within coordination distance of the zinc. In order to accommodate this binding, rearrangement of a conserved histidine ligand is required as well as several nearby residues within and around the putative active site. These observations indicate that binding of zinc serves a functional role in this cupin protein.

  7. Refined annotation of the complete genome of the phytopathogenic and xanthan producing Xanthomonas campestris pv. campestris strain B100 based on RNA sequence data.

    Science.gov (United States)

    Alkhateeb, Rabeaa S; Rückert, Christian; Rupp, Oliver; Pucker, Boas; Hublik, Gerd; Wibberg, Daniel; Niehaus, Karsten; Pühler, Alfred; Vorhölter, Frank-Jörg

    2017-07-10

    Bioinformatics tools and gene expression data were applied to identify new genes and to enhance the accuracy in genomic feature predictions for Xanthomonas campestris pv. campestris (Xcc) B100, a pathogen of cruciferous plants and model strain for the biosynthesis of xanthan, a polysaccharide with a multitude of commercial applications as a thickening agent. Results from 5'-enriched end RNA sequencing (RNA-seq) and total transcriptome RNA-seq experiments were used for this purpose. Functional gene annotations were updated where new evidence had emerged and start codon predictions were enhanced for 153 protein-coding genes (CDS). In total, 32 novel CDS, and 176 novel RNA genes and features were predicted, among them 77 isogenes of the small non-coding RNA sX9. Furthermore, the RNA-seq data facilitated the identification of 848 operons that included a total of 2551 CDS besides 1667 CDS that were mono-cistronically expressed. Copyright © 2017 Elsevier B.V. All rights reserved.

  8. Fatty acid DSF binds and allosterically activates histidine kinase RpfC of phytopathogenic bacterium Xanthomonas campestris pv. campestris to regulate quorum-sensing and virulence.

    Science.gov (United States)

    Cai, Zhen; Yuan, Zhi-Hui; Zhang, Huan; Pan, Yue; Wu, Yao; Tian, Xiu-Qi; Wang, Fang-Fang; Wang, Li; Qian, Wei

    2017-04-01

    As well as their importance to nutrition, fatty acids (FA) represent a unique group of quorum sensing chemicals that modulate the behavior of bacterial population in virulence. However, the way in which full-length, membrane-bound receptors biochemically detect FA remains unclear. Here, we provide genetic, enzymological and biophysical evidences to demonstrate that in the phytopathogenic bacterium Xanthomonas campestris pv. campestris, a medium-chain FA diffusible signal factor (DSF) binds directly to the N-terminal, 22 amino acid-length sensor region of a receptor histidine kinase (HK), RpfC. The binding event remarkably activates RpfC autokinase activity by causing an allosteric change associated with the dimerization and histidine phosphotransfer (DHp) and catalytic ATP-binding (CA) domains. Six residues were found essential for sensing DSF, especially those located in the region adjoining to the inner membrane of cells. Disrupting direct DSF-RpfC interaction caused deficiency in bacterial virulence and biofilm development. In addition, two amino acids within the juxtamembrane domain of RpfC, Leu172 and Ala178, are involved in the autoinhibition of the RpfC kinase activity. Replacements of them caused constitutive activation of RpfC-mediated signaling regardless of DSF stimulation. Therefore, our results revealed a biochemical mechanism whereby FA activates bacterial HK in an allosteric manner, which will assist in future studies on the specificity of FA-HK recognition during bacterial virulence regulation and cell-cell communication.

  9. Functional characterization and transcriptional analysis of galE gene encoding a UDP-galactose 4-epimerase in Xanthomonas campestris pv. campestris.

    Science.gov (United States)

    Li, Chien-Te; Liao, Chao-Tsai; Du, Shin-Chiao; Hsiao, Yu-Ping; Lo, Hsueh-Hsia; Hsiao, Yi-Min

    2014-01-01

    The Gram-negative plant pathogen Xanthomonas campestris pv. campestris (Xcc) is the causative agent of black rot in crucifers, a disease that causes tremendous agricultural loss. In this study, the Xcc galE gene was characterized. Sequence and mutational analysis demonstrated that the Xcc galE encodes a UDP-galactose 4-epimerase (EC 5.1.3.2), which catalyzes the interconversion of UDP-galactose and UDP-glucose. Alanine substitution of the putative catalytic residues (Ser124, Tyr147, and Lys151) of GalE caused loss of epimerase activity. Further study showed that the Xcc galE mutant had reduced biofilm formation ability. Furthermore, reporter assays revealed that galE transcription exhibits a distinct expression profile under different culture conditions, is subject to catabolite repression, and is positively regulated by Clp and RpfF. In addition, the galE transcription initiation site was mapped. This is the first time that UDP-galactose 4-epimerase has been characterized in the crucifer pathogen Xcc. Copyright © 2013 Elsevier GmbH. All rights reserved.

  10. MarR-Family Transcription Factor HpaR Controls Expression of the vgrR-vgrS Operon of Xanthomonas campestris pv. campestris.

    Science.gov (United States)

    Pan, Yue; Liang, Fang; Li, Ru-Jiao; Qian, Wei

    2018-01-03

    MarR (multiple antibiotic resistance regulator)-family transcription factors (TFs), which regulate the expression of virulence factors and other physiological pathways in pathogenic bacteria, are regarded as ideal molecular targets for the development of novel antimicrobial strategies. In the plant bacterial pathogen Xanthomonas campestris pv. campestris, HpaR, a typical MarR-family TF, is associated with bacterial virulence, but its mechanism of virulence regulation remains unclear. Here, we dissected the HpaR regulon using high-throughput RNA sequencing and chromatin immunoprecipitation sequencing. HpaR directly or indirectly controls the expression of approximately 448 genes; it acts both as a transcriptional activator and a repressor to control the expression of downstream genes by directly binding to their promoter regions. The consensus HpaR-binding DNA motifs contain imperfect palindromic sequences similar to [G/T]CAACAATT[C/T]TTG. In-depth analysis revealed that HpaR positively modulates transcription level of the vgrR-vgrS operon that encodes an important two-component signal transduction system to sense iron depletion and regulate bacterial virulence. Epistasis analysis demonstrated that vgrR-vgrS is a core downstream component of HpaR regulation, as overexpression of vgrR restored the phenotypic deficiencies caused by a hpaR mutation. This dissection of the HpaR regulon should facilitate future studies focused on the activating mechanism of HpaR during bacterial infection.

  11. Fatty acid DSF binds and allosterically activates histidine kinase RpfC of phytopathogenic bacterium Xanthomonas campestris pv. campestris to regulate quorum-sensing and virulence

    Science.gov (United States)

    Zhang, Huan; Pan, Yue; Wu, Yao; Tian, Xiu-Qi; Wang, Fang-Fang; Wang, Li

    2017-01-01

    As well as their importance to nutrition, fatty acids (FA) represent a unique group of quorum sensing chemicals that modulate the behavior of bacterial population in virulence. However, the way in which full-length, membrane-bound receptors biochemically detect FA remains unclear. Here, we provide genetic, enzymological and biophysical evidences to demonstrate that in the phytopathogenic bacterium Xanthomonas campestris pv. campestris, a medium-chain FA diffusible signal factor (DSF) binds directly to the N-terminal, 22 amino acid-length sensor region of a receptor histidine kinase (HK), RpfC. The binding event remarkably activates RpfC autokinase activity by causing an allosteric change associated with the dimerization and histidine phosphotransfer (DHp) and catalytic ATP-binding (CA) domains. Six residues were found essential for sensing DSF, especially those located in the region adjoining to the inner membrane of cells. Disrupting direct DSF-RpfC interaction caused deficiency in bacterial virulence and biofilm development. In addition, two amino acids within the juxtamembrane domain of RpfC, Leu172 and Ala178, are involved in the autoinhibition of the RpfC kinase activity. Replacements of them caused constitutive activation of RpfC-mediated signaling regardless of DSF stimulation. Therefore, our results revealed a biochemical mechanism whereby FA activates bacterial HK in an allosteric manner, which will assist in future studies on the specificity of FA-HK recognition during bacterial virulence regulation and cell-cell communication. PMID:28369120

  12. Genome-Wide Identification and Structural Analysis of bZIP Transcription Factor Genes in Brassica napus

    Directory of Open Access Journals (Sweden)

    Yan Zhou

    2017-10-01

    Full Text Available The basic region/leucine zipper motif (bZIP transcription factor family is one of the largest families of transcriptional regulators in plants. bZIP genes have been systematically characterized in some plants, but not in rapeseed (Brassica napus. In this study, we identified 247 BnbZIP genes in the rapeseed genome, which we classified into 10 subfamilies based on phylogenetic analysis of their deduced protein sequences. The BnbZIP genes were grouped into functional clades with Arabidopsis genes with similar putative functions, indicating functional conservation. Genome mapping analysis revealed that the BnbZIPs are distributed unevenly across all 19 chromosomes, and that some of these genes arose through whole-genome duplication and dispersed duplication events. All expression profiles of 247 bZIP genes were extracted from RNA-sequencing data obtained from 17 different B. napus ZS11 tissues with 42 various developmental stages. These genes exhibited different expression patterns in various tissues, revealing that these genes are differentially regulated. Our results provide a valuable foundation for functional dissection of the different BnbZIP homologs in B. napus and its parental lines and for molecular breeding studies of bZIP genes in B. napus.

  13. Genome-Wide Identification and Structural Analysis of bZIP Transcription Factor Genes in Brassica napus

    Science.gov (United States)

    Zhou, Yan; Xu, Daixiang; Jia, Ledong; Huang, Xiaohu; Ma, Guoqiang; Wang, Shuxian; Zhu, Meichen; Zhang, Aoxiang; Guan, Mingwei; Xu, Xinfu; Wang, Rui; Li, Jiana

    2017-01-01

    The basic region/leucine zipper motif (bZIP) transcription factor family is one of the largest families of transcriptional regulators in plants. bZIP genes have been systematically characterized in some plants, but not in rapeseed (Brassica napus). In this study, we identified 247 BnbZIP genes in the rapeseed genome, which we classified into 10 subfamilies based on phylogenetic analysis of their deduced protein sequences. The BnbZIP genes were grouped into functional clades with Arabidopsis genes with similar putative functions, indicating functional conservation. Genome mapping analysis revealed that the BnbZIPs are distributed unevenly across all 19 chromosomes, and that some of these genes arose through whole-genome duplication and dispersed duplication events. All expression profiles of 247 bZIP genes were extracted from RNA-sequencing data obtained from 17 different B. napus ZS11 tissues with 42 various developmental stages. These genes exhibited different expression patterns in various tissues, revealing that these genes are differentially regulated. Our results provide a valuable foundation for functional dissection of the different BnbZIP homologs in B. napus and its parental lines and for molecular breeding studies of bZIP genes in B. napus. PMID:29064393

  14. Xylitol production by Debaryomyces hansenii and Candida guilliermondii from rapeseed straw hemicellulosic hydrolysate

    DEFF Research Database (Denmark)

    López-Linares, Juan Carlos; Romero, Inmaculada; Cara, Cristobal

    2018-01-01

    This study evaluated the possibility of using rapeseed straw hemicellulosic hydrolysate as a fermentation medium for xylitol production. Two yeast strains, namely Debaryomyces hansenii and Candida guilliermondii, were used for this bioconversion process and their performance to convert xylose int...

  15. Rapeseed is an efficient energy crop which can still improve

    Directory of Open Access Journals (Sweden)

    Flenet Francis

    2007-11-01

    Full Text Available The ability of biofuels to contribute efficiently to the replacement of fossil energy and to the reduction of greenhouse gas emissions has been a matter of debate. Hence, there is a need to assess accurately the energy balance of biofuels and their ability to reduce greenhouse gas emissions, in order to evaluate and to improve the benefit for society. In rapeseed, the energy ratio (energy produced per unit of non-renewable energy input is well above 2 whatever the method of calculation. In order to investigate the variability of energy ratios and to identify ways of improvement, a study was conducted in France in 2005 and 2006. The method of mass allocation of input energy was used for calculations, instead of the substitution method, because with this method the results do not depend on the utilization of co-products. Hence, this method is better adapted to follow improvements. A great variability in the energy ratio was observed in 2005 and 2006. Seed yields and energy cost of fertilizer N explained most of this variability. Hence, improvements should focus on increasing yield with little increase in energy cost, and on decreasing wasting of N fertilizer. However the farmer incomes, and the net production of energy per hectare, must also be a matter of concern. The inventories of greenhouse gas emissions of biofuels are still uncertain because of the great variability of soil emissions, due to environmental and management factors. Hence, in order to assess the effect of rapeseed on greenhouse gas emissions, methods based on process-oriented models accounting for these factors must be used. Such models give promising results, but further testing is still needed.

  16. Ileal digestibility of sunfl ower meal, pea, rapeseed cake, and lupine in pigs

    DEFF Research Database (Denmark)

    Nørgaard, Jan Værum; Fernández, José Adalberto; Jørgensen, Henry

    2012-01-01

    .05) for soybean meal and pea compared to sunfl ower meal, rapeseed cake, and lupine. The SID of Lys and His were lowest (P digestible protein source relative to sunfl ower......The standardized ileal digestibility (SID) of CP and AA was evaluated in soybean (Glycine max) meal, sunfl ower (Helianthus annuus) meal, rapeseed cake, and fi eld pea (Pisum sativum) using 10 pigs and in lupine (Lupinus angustifolius) using 7 pigs. Pigs were fi tted with either a T...

  17. Increase of protein extraction yield from rapeseed meal through a pretreatment with phytase.

    Science.gov (United States)

    Rodrigues, Ivo M; Carvalho, M Graça Vs; Rocha, Jorge Ms

    2017-06-01

    Rapeseed meal is a good source of high-quality vegetal protein but contains antinutritional compounds that limit its use for human and animal feed. The aim of this study was to develop a methodology to enhance alkaline protein extraction of rapeseed meal and to produce protein-rich products with low levels of phytic acid. Different phytase dosages and operating conditions were used for rapeseed meal pretreatment followed by alkaline extraction at different temperatures, time, pH and solid/liquid ratios (S/L). The highest protein extraction yield attained was 72.1%, for 2 h at 55 °C, with a phytase dosage of 0.8 U g(-1) when the alkaline extraction was performed at 75 °C, pH 12.5 and 60 min for an S/L ratio of 10 g 100 mL(-1) water. The extraction yields were higher than those previously obtained without enzymatic pretreatment. Phytase pretreatment enhanced alkaline extraction yield of proteins from rapeseed meal. This procedure allowed also the production of rapeseed protein concentrates with very low levels of phytic acid, ∼1 g kg(-1) , improving their nutritional properties and commercial value. Moreover, after the pretreatment, the amount of phytic acid in the remaining rapeseed meal decreases about 25%. © 2016 Society of Chemical Industry. © 2016 Society of Chemical Industry.

  18. Characterization of the Factors that Influence Sinapine Concentration in Rapeseed Meal during Fermentation

    Science.gov (United States)

    Niu, Yanxing; Jiang, Mulan; Guo, Mian; Wan, Chuyun; Hu, Shuangxi; Jin, Hu; Huang, Fenghong

    2015-01-01

    We analyzed and compared the difference in sinapine concentration in rapeseed meal between the filamentous fungus, Trametes sp 48424, and the yeast, Saccharomyces cerevisiae, in both liquid and solid-state fermentation. During liquid and solid-state fermentation by Trametes sp 48424, the sinapine concentration decreased significantly. In contrast, the liquid and solid-state fermentation process by Saccharomyces cerevisiae just slightly decreased the sinapine concentration (P ≤ 0.05). After the solid-state fermented samples were dried, the concentration of sinapine in rapeseed meal decreased significantly in Saccharomyces cerevisiae. Based on the measurement of laccase activity, we observed that laccase induced the decrease in the concentration of sinapine during fermentation with Trametes sp 48424. In order to eliminate the influence of microorganisms and the metabolites produced during fermentation, high moisture rapeseed meal and the original rapeseed meal were dried at 90°C and 105°C, respectively. During drying, the concentration of sinapine in high moisture rapeseed meal decreased rapidly and we obtained a high correlation coefficient between the concentration of sinapine and loss of moisture. Our results suggest that drying and enzymes, especially laccase that is produced during the solid-state fermentation process, may be the main factors that affect the concentration of sinapine in rapeseed meal. PMID:25606856

  19. Characterization of the factors that influence sinapine concentration in rapeseed meal during fermentation.

    Directory of Open Access Journals (Sweden)

    Yanxing Niu

    Full Text Available We analyzed and compared the difference in sinapine concentration in rapeseed meal between the filamentous fungus, Trametes sp 48424, and the yeast, Saccharomyces cerevisiae, in both liquid and solid-state fermentation. During liquid and solid-state fermentation by Trametes sp 48424, the sinapine concentration decreased significantly. In contrast, the liquid and solid-state fermentation process by Saccharomyces cerevisiae just slightly decreased the sinapine concentration (P ≤ 0.05. After the solid-state fermented samples were dried, the concentration of sinapine in rapeseed meal decreased significantly in Saccharomyces cerevisiae. Based on the measurement of laccase activity, we observed that laccase induced the decrease in the concentration of sinapine during fermentation with Trametes sp 48424. In order to eliminate the influence of microorganisms and the metabolites produced during fermentation, high moisture rapeseed meal and the original rapeseed meal were dried at 90 °C and 105 °C, respectively. During drying, the concentration of sinapine in high moisture rapeseed meal decreased rapidly and we obtained a high correlation coefficient between the concentration of sinapine and loss of moisture. Our results suggest that drying and enzymes, especially laccase that is produced during the solid-state fermentation process, may be the main factors that affect the concentration of sinapine in rapeseed meal.

  20. Identification and quantification of glucosinolates in rapeseed using liquid chromatography-ion trap mass spectrometry.

    Science.gov (United States)

    Millán, Silvia; Sampedro, M Carmen; Gallejones, Patricia; Castellón, Ander; Ibargoitia, Maria L; Goicolea, M Aranzazu; Barrio, Ramón J

    2009-07-01

    A rapid and sensitive method for the speciation and quantification of glucosinolates in rapeseed is described. The method combines liquid chromatography (LC) with ion trap mass spectrometry (ITMS) detection. Electrospray ionization (ESI) has been chosen as the ionization technique for the on-line coupling of LC with ITMS. Glucosinolates are extracted from different rapeseeds with MeOH and the extracts are cleaned-up by solid phase extraction with Florisil cartridges. Aqueous extracts are injected into LC system coupled to an ITMS, leading to accurately quantify eight of the most important glucosinolates in rapeseed, by MS2 mode and confirming their structure by MS3 acquisition. All the glucosinolates found in rapeseeds provide good signals corresponding to the deprotonated precursor ion [M-H]-. The method is reliable and reproducible, and detection limits range from 0.5 nmol g(-1) to 3.7 nmol g(-1) when 200 mg of dried seeds of certified reference material are analyzed. Within-day and between-day RSD percentages range between 2.4-14.1% and 3.9-16.9%, respectively. The LC-ESI-ITMS-MS method described here allows for a rapid assessment of these metabolites in rapeseed without a desulfatation step. The overall process has been successfully applied to identify and quantify glucosinolates in rapeseed samples.

  1. Effect of Scarification, Self-Inhibition, and Sowing Depth on Seed Germination of Lupinus campestris Efecto de la Escarificación, Autoinhibición y Profundidad de Siembra sobre la Germinación de Semillas de Lupinus campestris

    OpenAIRE

    Pedro Gutiérrez Nava; Fernando De León González; Jorge Etchevers Barra; Alejandro Casas Fernández

    2010-01-01

    Lupinus campestris Schltdl. & Cham. grows in shallow fields and disturbed areas of Central Mexico. It has potential to improve soil fertility and as fodder. Seeds of L. campestris show dormancy, and the technology needed to increase its potential use requires information about conditions favouring seed germination. The aim of this study was to evaluate the seed germination responseof L. campestris under controlled (laboratory) and natural field conditions. Under laboratory conditions, 2 yr ol...

  2. Optimized Rapeseed Oils Rich in Endogenous Micronutrients Protect High Fat Diet Fed Rats from Hepatic Lipid Accumulation and Oxidative Stress

    OpenAIRE

    Jiqu Xu; Xiaoli Liu; Hui Gao; Chang Chen; Qianchun Deng; Qingde Huang; Zhonghua Ma; Fenghong Huang

    2015-01-01

    Micronutrients in rapeseed exert a potential benefit to hepatoprotection, but most of them are lost during the conventional refining processing. Thus some processing technologies have been optimized to improve micronutrient retention in oil. The aim of this study is to assess whether optimized rapeseed oils (OROs) have positive effects on hepatic lipid accumulation and oxidative stress induced by a high-fat diet. Methods: Rats received experiment diets containing 20% fat and refined rapeseed ...

  3. Transformation of LTP gene into Brassica napus to enhance its resistance to Sclerotinia sclerotiorum.

    Science.gov (United States)

    Fan, Y; Du, K; Gao, Y; Kong, Y; Chu, C; Sokolov, V; Wang, Y

    2013-04-01

    Rapeseed (Brassica napus L.) is one of the most important economic crops worldwide, and Sclerotinia sclerotiorum is the most dangerous disease that affects its yield greatly. Lipid transfer protein (LTP) has broad-spectrum anti-bacterial and fungal activities. In this study, B. napus was transformed using Agrobacterium tumefaciens harboring the plasmid-containing LTP gene to study its possible capability of increasing plant's resistance. First, we optimized the petiole genetic transformation system by adjusting the days of explants, bacterial concentrations, ratio of hormones, and cultivating condition. Second, we obtained 8 positive plants by PCR analysis of T0 generation. The PCR results of T1 generation were positive, indicating that the LTP gene had been integrated into B. napus. Third, T1 transgenic plants inoculated by detached leaves with mycelia of S. sclerotiorum showed better disease resistance than non-transformants. Oxalic acid belongs to secondary metabolites of S. sclerotiorum, and several studies have demonstrated that the resistance of rapeseed to oxalic acid is significantly consistent with its resistance to S. sclerotiorum. The result from the seed germination assay showed that when T1 seeds were exposed to oxalic acid stress, their germination rate was evidently higher than that of non-transformant seeds. In addition, we measured some physiological changes in T1 plants and control plants under oxalic acid stress. The results showed that T1 transgenic plants had lower malondialdehyde (MDA) content, higher super oxide dismutase (SOD), and peroxidase (POD) activities than non-transformants, whereas disease resistance was related to low MDA content and high SOD and POD activities.

  4. Association of the Cytoplasmic Membrane Protein XpsN with the Outer Membrane Protein XpsD in the Type II Protein Secretion Apparatus of Xanthomonas campestris pv. Campestris

    Science.gov (United States)

    Lee, Hsien-Ming; Wang, Kuan-Cheng; Liu, Yi-Ling; Yew, Hsin-Yan; Chen, Ling-Yun; Leu, Wei-Ming; Chen, David Chanhen; Hu, Nien-Tai

    2000-01-01

    An xps gene cluster composed of 11 open reading frames is required for the type II protein secretion in Xanthomonas campestris pv. campestris. Immediately upstream of the xpsD gene, which encodes an outer membrane protein that serves as the secretion channel by forming multimers, there exists an open reading frame (previously designated ORF2) that could encode a protein of 261 amino acid residues. Its N-terminal hydrophobic region is a likely membrane-anchoring sequence. Antibody raised against this protein could detect in the wild-type strain of X. campestris pv. campestris a protein band with an apparent molecular mass of 36 kDa by Western blotting. Its aberrant slow migration in sodium dodecyl sulfate-polyacrylamide gels might be due to its high proline content. We designated this protein XpsN. By constructing a mutant strain with an in-frame deletion of the chromosomal xpsN gene, we demonstrated that it is required for the secretion of extracellular enzyme by X. campestris pv. campestris. Subcellular fractionation studies indicated that the XpsN protein was tightly associated with the membrane. Sucrose gradient sedimentation followed by immunoblot analysis revealed that it primarily appeared in the cytoplasmic membrane fractions. Immune precipitation experiments indicated that the XpsN protein was coprecipitated with the XpsD protein. In addition, the XpsN protein was co-eluted with the (His)6-tagged XpsD protein from the metal affinity chromatography column. All observations suggested that the XpsN protein forms a stable complex with the XpsD protein. In addition, immune precipitation analysis of the XpsN protein with various truncated XpsD proteins revealed that the C-terminal region of the XpsD protein between residues 650 and 759 was likely to be involved in complex formation between the two. PMID:10692359

  5. [Separation and purification of the main glucosinolate from rapeseeds].

    Science.gov (United States)

    Zhou, Jinlan; Hu, Jianhu; Qiu, Aiyong

    2005-07-01

    A procedure for the preparative isolation of 1-S-[(1Z)-3-hydroxy-1-[(sulfooxy) imino]-4-pentenyl]-1-thio-beta-D-glucopyanose, potassium salt (progoitrin) from Brassica oleracea is reported. The major steps in this procedure were: (1) extraction of glucosinolates with methanol from Brassica oleracea; (2) separation and purification of glucosinolates by chromatographic column on alumina support; and (3) a follow-up reversed-phase separation by octadecyl (C18) silica support yielding progoitrin as the main content of glucosinolate. The structure of progoitrin was identified on its physicochemical properties by ultraviolet absorption spectrometry, infrared absorption, 'H nuclear magnetic resonance spectroscopy, mass spectrometry and elemental analysis. Spectroscopic data of the sample isolated were in agreement with those reported in the literature. The purity of progoitrin obtained was determined to be 99% by high performance liquid chromatography. The simplicity of the separation and purification procedure for glucosinolates and the high purity of progoitrin isolated would make the method an important reference for future research on glucosinolates and a favorable technique for future development.

  6. A 3.9-kb DNA region of Xanthomonas campestris pv. campestris that is necessary for lipopolysaccharide production encodes a set of enzymes involved in the synthesis of dTDP-rhamnose.

    OpenAIRE

    Köplin, R; Wang, G.; Hötte, B; Priefer, U B; Pühler, A

    1993-01-01

    By mutational analysis it was found that a 3.9-kb SmaI-XhoII DNA fragment of Xanthomonas campestris pv. campestris is involved in lipopolysaccharide (LPS) biosynthesis. LPS samples isolated from different mutants carrying mutations in the 3.9-kb SmaI-XhoII DNA fragment exhibited banding patterns in silver-stained sodium dodecyl sulfate-polyacrylamide gels markedly different from that of the wild-type LPS. Moreover, comparison of the monosaccharide composition obtained by high-performance anio...

  7. Genome-wide Association Study Identifies New Loci for Resistance to Sclerotinia Stem Rot in Brassica napus.

    Science.gov (United States)

    Wu, Jian; Zhao, Qing; Liu, Sheng; Shahid, Muhammad; Lan, Lei; Cai, Guangqin; Zhang, Chunyu; Fan, Chuchuan; Wang, Youping; Zhou, Yongming

    2016-01-01

    Sclerotinia stem rot (SSR) caused by the necrotrophic fungus Sclerotinia sclerotiorum is a major disease in rapeseed (Brassica napus) worldwide. Breeding for SSR resistance in B. napus, as in other crops, relies only on germplasms with quantitative resistance genes. A better understanding of the genetic basis for SSR resistance in B. napus thus holds promise for the genetic improvement of disease resistance. In the present study, a genome-wide association study (GWAS) for SSR resistance in B. napus were performed using an association panel of 448 accessions genotyped with the Brassica 60K Infinium® single-nucleotide polymorphism (SNP) array. A total of 26 SNPs corresponding to three loci, DSRC4, DSRC6, and DSRC8 were associated with SSR resistance. Haplotype analysis showed that the three favorable alleles for SSR resistance exhibited cumulative effects. After aligning SSR resistance quantitative trait loci (QTL) identified in the present and previous studies to the B. napus reference genome, one locus (DSRC6) was found to be located within the confidence interval of a QTL identified in previous QTL mapping studies and another two loci (DSRC4 and DSRC8) were considered novel loci for SSR resistance. A total of 39 candidate genes were predicted for the three loci based on the GWAS combining with the differentially expressed genes identified in previous transcriptomics analyses.

  8. Genome-wide association study identifies new loci for resistance to Sclerotinia stem rot in Brassica napus

    Directory of Open Access Journals (Sweden)

    Jian Wu

    2016-09-01

    Full Text Available Sclerotinia stem rot (SSR caused by the necrotrophic fungus Sclerotinia sclerotiorum is a major disease in rapeseed (Brassica napus worldwide. Breeding for SSR resistance in B. napus, as in other crops, relies only on germplasms with quantitative resistance genes. A better understanding of the genetic basis for SSR resistance in B. napus thus holds promise for the genetic improvement of disease resistance. In the present study, a genome-wide association study (GWAS for SSR resistance in B. napus were performed using an association panel of 448 accessions genotyped with the Brassica 60K Infinium® single-nucleotide polymorphism (SNP array. A total of 26 SNPs corresponding to 3 loci, DSRC4, DSRC6 and DSRC8 were associated with SSR resistance. Haplotype analysis showed that the 3 favourable alleles for SSR resistance exhibited cumulative effects. After aligning SSR resistance quantitative trait loci (QTL identified in the present and previous studies to the B. napus reference genome, one locus (DSRC6 was found to be located within the confidence interval of a QTL identified in previous QTL mapping studies and another two loci (DSRC4 and DSRC8 were considered novel loci for SSR resistance. A total of 39 candidate genes were predicted for the 3 loci based on the GWAS combining with the differentially expressed genes identified in previous transcriptomics analyses.

  9. Chemical characterization of Xanthan biopolymers synthesized by Xanthomonas campestris pv pruni strains; Caracterizacao quimica de biopolimeros sintetizados por Xanthomonas campestris pv pruni

    Energy Technology Data Exchange (ETDEWEB)

    Moreira, Angelita da S.; Vendruscolo, Claire T.; Furlan, Ligia [Universidade Federal de Pelotas, RS (Brazil). Centro de Biotecnologia]. E-mail: angelita@ufpel.tche.br; claire@ufpel.tche.br; ligia@ufpel.tche.br; Galland, Griselda [Rio Grande do Sul Univ., Porto Alegre, RS (Brazil). Inst. de Qumica

    2001-07-01

    In this work we describe the characterisation of Xanthan biopolymers synthesized by two Xanthomonas campestris pv pruni strains, in aerobic fermentation. By chromatography on TLC we could notice the presence of Mannose monomer in higher proportion in the 82 strain with relation to the another ones. The viscosity results showed the temperature dependence. The 06 and 82 strains had their viscosity increased whereas for the 87 strain we could observe a reduction with temperature increasing. The {sup 13}C NMR spectrum of 87 strain showed the characteristic signals at approximately 92.8, 70.4 and 61.4 ppm, attributed to C1, C4 and C6 from glucose monomer, with higher intensity. (author)

  10. Molecular Mapping and QTL for Expression Profiles of Flavonoid Genes in Brassica napus

    Science.gov (United States)

    Qu, Cunmin; Zhao, Huiyan; Fu, Fuyou; Zhang, Kai; Yuan, Jianglian; Liu, Liezhao; Wang, Rui; Xu, Xinfu; Lu, Kun; Li, Jia-Na

    2016-01-01

    Flavonoids are secondary metabolites that are extensively distributed in the plant kingdom and contribute to seed coat color formation in rapeseed. To decipher the genetic networks underlying flavonoid biosynthesis in rapeseed, we constructed a high-density genetic linkage map with 1089 polymorphic loci (including 464 SSR loci, 97 RAPD loci, 451 SRAP loci, and 75 IBP loci) using recombinant inbred lines (RILs). The map consists of 19 linkage groups and covers 2775 cM of the B. napus genome with an average distance of 2.54 cM between adjacent markers. We then performed expression quantitative trait locus (eQTL) analysis to detect transcript-level variation of 18 flavonoid biosynthesis pathway genes in the seeds of the 94 RILs. In total, 72 eQTLs were detected and found to be distributed among 15 different linkage groups that account for 4.11% to 52.70% of the phenotypic variance atrributed to each eQTL. Using a genetical genomics approach, four eQTL hotspots together harboring 28 eQTLs associated with 18 genes were found on chromosomes A03, A09, and C08 and had high levels of synteny with genome sequences of A. thaliana and Brassica species. Associated with the trans-eQTL hotspots on chromosomes A03, A09, and C08 were 5, 17, and 1 genes encoding transcription factors, suggesting that these genes have essential roles in the flavonoid biosynthesis pathway. Importantly, bZIP25, which is expressed specifically in seeds, MYC1, which controls flavonoid biosynthesis, and the R2R3-type gene MYB51, which is involved in the synthesis of secondary metabolites, were associated with the eQTL hotspots, and these genes might thus be involved in different flavonoid biosynthesis pathways in rapeseed. Hence, further studies of the functions of these genes will provide insight into the regulatory mechanism underlying flavonoid biosynthesis, and lay the foundation for elaborating the molecular mechanism of seed coat color formation in B. napus. PMID:27881992

  11. Mutation of the gene encoding a major outer-membrane protein in Xanthomonas campestris pv. campestris causes pleiotropic effects, including loss of pathogenicity.

    Science.gov (United States)

    Chen, Yih-Yuan; Wu, Chieh-Hao; Lin, Juey-Wen; Weng, Shu-Fen; Tseng, Yi-Hsiung

    2010-09-01

    Xanthomonas campestris pv. campestris (Xcc) is the phytopathogen that causes black rot in crucifers. The xanthan polysaccharide and extracellular enzymes produced by this organism are virulence factors, the expression of which is upregulated by Clp (CRP-like protein) and DSF (diffusible signal factor), which is synthesized by RpfF. It is also known that biofilm formation/dispersal, regulated by the effect of controlled synthesis of DSF on cell-cell signalling, is required for virulence. Furthermore, a deficiency in DSF causes cell aggregation with concomitant production of a gum-like substance that can be dispersed by addition of DSF or digested by exogenous endo-beta-1,4-mannanase expressed by Xcc. In this study, Western blotting of proteins from a mopB mutant (XcMopB) showed Xcc MopB to be the major outer-membrane protein (OMP); Xcc MopB shared over 97 % identity with homologues from other members of Xanthomonas. Similarly to the rpfF mutant, XcMopB formed aggregates with simultaneous production of a gummy substance, but these aggregates could not be dispersed by DSF or endo-beta-1,4-mannanase, indicating that different mechanisms were involved in aggregation. In addition, XcMopB showed surface deformation, altered OMP composition, impaired xanthan production, increased sensitivity to stressful conditions including SDS, elevated temperature and changes in pH, reduced adhesion and motility and defects in pathogenesis. The finding that the major OMP is required for pathogenicity is unprecedented in phytopathogenic bacteria.

  12. Genome wide transcription start sites analysis of Xanthomonas campestris pv. campestris B100 with insights into the gum gene cluster directing the biosynthesis of the exopolysaccharide xanthan.

    Science.gov (United States)

    Alkhateeb, Rabeaa S; Vorhölter, Frank-Jörg; Rückert, Christian; Mentz, Almut; Wibberg, Daniel; Hublik, Gerd; Niehaus, Karsten; Pühler, Alfred

    2016-05-10

    Xanthomonas campestris pv. campestris (Xcc) is the major producer of the exopolysaccharide xanthan, the commercially most important natural polysaccharide of microbial origin. The current work provides deeper insights into the yet uncharacterized transcriptomic features of the xanthan producing strain Xcc-B100. Towards this goal, RNA sequencing of a library based on the selective enrichment of the 5' ends of native transcripts was performed. This approach resulted in the genome wide identification of 3067 transcription start sites (TSSs) that were further classified based on their genomic positions. Among them, 1545 mapped upstream of an actively transcribed CDS and 1363 were classified as novel TSSs representing antisense, internal, and TSSs belonging to previously unidentified genomic features. Analyzing the transcriptional strength of primary and antisense TSSs revealed that in some instances antisense transcription seemed to be initiated at a higher level than its sense counterpart. Mapping the exact positions of TSSs aided in the identification of promoter consensus motifs, ribosomal binding sites, and enhanced the genome annotation of 159 in silico predicted translational start (TLS) sites. The global view on length distribution of the 5' untranslated regions (5'-UTRs) deduced from the data pointed to the occurrence of leaderless transcripts and transcripts with unusually long 5'-UTRs, in addition to identifying seven putative riboswitch elements for Xcc-B100. Concerning the biosynthesis of xanthan, we focused on the transcriptional organization of the gum gene cluster. Under the conditions tested, we present evidence for a complex transcription pattern of the gum genes with multiple TSSs and an obvious considerable role of antisense transcription. The gene gumB, encoding an outer membrane xanthan exporter, is presented here as an example for genes that possessed a strong antisense TSS. Copyright © 2016 Elsevier B.V. All rights reserved.

  13. Significant alterations in anisotropic ice growth rate induced by the ice nucleation-active bacteria Xanthomonas campestris

    Science.gov (United States)

    Nada, Hiroki; Zepeda, Salvador; Miura, Hitoshi; Furukawa, Yoshinori

    2010-09-01

    In the present study, we found that the ice nucleation-active bacteria Xanthomonas campestris significantly altered anisotropic ice growth rate. Results of ice growth experiments in the presence of X. campestris showed that this bacterium decreased the ice crystal growth rate in the c-axis, whereas it increased growth rates in directions normal to the c-axis. These results indicate that these alterations in anisotropic growth rate are the result of selective binding of bacterial ice-nucleating proteins along the {0 0 0 1} basal plane.

  14. Brassica oleracea and B. napus.

    Science.gov (United States)

    Sparrow, Penny A C Hundleby Née; Irwin, Judith A

    2015-01-01

    With the accelerating advances in genetics and genomics research in Arabidopsis and Brassica, transformation technologies are now routinely being exploited to elucidate gene function as well as contributing to the development of novel enhanced crops. When a researcher's desired goal is simply to modify or introduce candidate genes into a Brassica, the availability of easy-to-follow protocols and knowledge of readily transformable genotypes becomes a valuable resource. In this chapter we outline a basic A. tumefaciens-mediated transformation method, using 4-day-old cotyledonary explants, that has been successfully applied to a range of different B. oleracea and B. napus genotypes. For demonstration purposes, we focus primarily on the diploid species B. oleracea using a model doubled haploid genotype, AG DH1012. After only 3-4 weeks on kanamycin selection the first transgenic shoots can be isolated. Transformation efficiencies are typically in the region of 15-25 % (based on 15-25 PCR-positive independent shoots from 100 inoculated explants). Most explants will produce multiple shoots (1-3+ per explant) and so the total number of transgenic shoots produced will exceed 15-25 per 100 explant experiment. The protocol is also applicable to B. napus and modifications specific to this species are highlighted accordingly. For researchers wishing to use their own plant genotype, tissue culture phenotypes that are conducive to efficient transformation are also highlighted within this chapter.

  15. Genotoxic potential of organic extracts from particle emissions of diesel and rapeseed oil powered engines.

    Science.gov (United States)

    Topinka, Jan; Milcova, Alena; Schmuczerova, Jana; Mazac, Martin; Pechout, Martin; Vojtisek-Lom, Michal

    2012-07-07

    The present study was performed to identify possible genotoxicity induced by organic extracts from particulate matter in the exhaust of two typical diesel engines run on diesel fuel and neat heated fuel-grade rapeseed oil: a Cummins ISBe4 engine tested using the World Harmonized Steady State Test Cycle (WHSC) and modified Engine Steady Cycle (ESC) and a Zetor 1505 engine tested using the Non-Road Steady State Cycle (NRSC). In addition, biodiesel B-100 (neat methylester of rapeseed oil) was tested in the Cummins engine run on the modified ESC. Diluted exhaust was sampled with high-volume samplers on Teflon coated filters. Filters were extracted with dichlormethane (DCM) and DNA adduct levels induced by extractable organic matter (EOM) in an acellular assay of calf thymus DNA coupled with (32)P-postlabeling in the presence and absence of rat liver microsomal S9 fraction were employed. Simultaneously, the chemical analysis of 12 priority PAHs in EOM, including 7 carcinogenic PAHs (c-PAHs) was performed. The results suggest that diesel emissions contain substantially more total PAHs than rapeseed oil emissions (for the ESC) or that these concentrations were comparable (for the WHSC and NRSC), while c-PAHs levels were comparable (for the ESC) or significantly higher (for the WHSC and NRSC) for rapeseed oil emissions. DNA adduct levels induced by diesel and rapeseed oil derived EOM were comparable, but consistently slightly higher for diesel than for rapeseed oil. Highly significant correlations were found between 12 priority PAHs concentrations and DNA adduct levels (0.980; ptest cycle than on the fuel. Our findings suggest that the genotoxicity of particulate emissions from the combustion of rapeseed oil is significant and is comparable to that from the combustion of diesel fuel. A more detailed study is ongoing to verify and extent these preliminary findings. Copyright © 2012 Elsevier Ireland Ltd. All rights reserved.

  16. Distribution and harmfulness of field dodder (Cuscuta campestris Yuncker at sugar beet fields in Slovakia

    Directory of Open Access Journals (Sweden)

    Tóth Peter

    2006-01-01

    Full Text Available During 2002-2004, field surveys of field dodder (Cuscuta campestris Yunck e r in croplands were done in southwestern Slovakia. From among 150 localities surveyed, 80 were found infested by the field dodder. Within crop plants, C. campestris infested sugar beet (Beta vulgaris, alfalfa (Medicago sativa tobacco (Nicotiana tabacum, potato (Solanum tuberosum, lentil (Lens esculenta, parsley (Pastinaca sativa and onion (Allium cepa. Besides the crops, 18 weed species were also recorded. The species from the genus Polygonum (Polygonaceae were the most important and acted as a significant reservoir of field dodder in cropland. C. campestris was not found in cold climatic regions with altitude higher than 240 m. The impact of field dodder infestation on sugar beet yield was studied during the year of 2004 in two localities (Šalov and Žitavce in southwestern Slovakia. The presence of field dodder markedly reduced both, quantity and quality of sugar beet yield. Weight of heavily infested beets was reduced from 21.6 to 37.4% and sugar content from 12.0 to 15.2%. Such decline of both parameters was also recorded when field dodder was removed together with leaves of sugar beet during growing season at the end of July. The aim of the infested leaves removal was to decrease mass of field dodder seeds. Although the leaf area of sugar beet regenerates, the decrease of quality and quantity was observed. The decline was the same at both localities, no matter whether the fields were irrigated (Šalov or not (Žitavce.

  17. Searching for a trace of Artemisia campestris pollen in the air

    Directory of Open Access Journals (Sweden)

    Łukasz Grewling

    2015-12-01

    Full Text Available The aim of the study was to determinate whether Artemisia campestris was present in the vicinity of 8 pollen monitoring stations in Poland by examining temporal variations in daily average airborne Artemisia pollen data recorded by Hirst type volumetric traps. Three day moving averages of airborne Artemisia pollen were examined by Spearman’s rank correlation test. Results show that Artemisia pollen seasons in Poland generally display similar unimodal patterns (correlation coefficients r > 0.900; P < 0.05. The only exception was the Artemisia pollen concentration noted in the outskirts of Poznań (Morasko, where the bimodal pattern was revealed. Correlations between Artemisia pollen data recorded at Poznań-Morasko and the other Polish sites were the lowest in the investigated dataset; this was particularly noticeable in the second part of pollen season (r ~0.730. We show that the typical bimodal pattern in Artemisia pollen seasons, which is characteristic of the presence of both A. vulgaris (first peak and A. campestris (second peak, does not occur at the majority of sites in Poland and is restricted to the outskirts of Poznań. In fact, it was noted that the pollen monitoring site in Poznań-Centre, just 8 km from Morasko, only exhibited one peak (attributed to A. vulgaris. This shows that the influence of A. campestris on airborne pollen season curves is limited and can be largely disregarded. In addition, this study supports previous records showing that the spatial distribution of airborne Artemisia pollen within a city (urban-rural gradient can vary markedly, depending on the species composition.

  18. Intraspecific chromosomal and genetic polymorphism in Brassica ...

    Indian Academy of Sciences (India)

    2014-04-16

    Apr 16, 2014 ... 2002). The development of genome-specific DNA markers, which reveal homozygous and heterozygous state of FAE1.1 locus, gives an opportunity to evaluate the genetic polymor- phism of rapeseed varieties and to accelerate the breeding of new canola varieties with desired properties. Some other.

  19. Levantamento da intensidade da alternariose e da podridão negra em cultivos orgânicos de brássicas em Pernambuco e Santa Catarina Survey of the intensity of Alternaria black spot and black rot on brassica species under organic farming systems in Pernambuco and Santa Catarina states, Brazil

    Directory of Open Access Journals (Sweden)

    Luiz A M Peruch

    2006-12-01

    Full Text Available O objetivo deste trabalho foi avaliar a intensidade da alternariose, causada por Alternaria brassicicola e/ou Alternaria brassicae, e da podridão negra, causada por Xanthomonas campestris pv. campestris, em cultivos orgânicos de brássicas em Pernambuco e Santa Catarina. Os levantamentos foram realizados no período de novembro de 2001 a fevereiro de 2002, num total de 103 cultivos orgânicos de várias espécies de brássicas. Foram registradas elevadas prevalências das doenças nos estados, com exceção em couve-chinesa em Santa Catarina. A prevalência da alternariose foi 100% nos cultivos de brócolis em Pernambuco, bem como em couve-flor nos dois estados, enquanto a podridão negra atingiu esse nível nos cultivos de brócolis e couve-flor em Santa Catarina. Na média das diferentes espécies de brássicas, as doenças foram mais prevalentes em Pernambuco que Santa Catarina. Entretanto, as médias de severidade de cada doença no conjunto das brássicas não foram diferentes entre os estados, embora as condições climáticas tenham sido nitidamente distintas. A severidade da alternariose variou entre as espécies de brássicas somente em Pernambuco, com a menor severidade registrada em couve-manteiga. Em relação à podridão negra, apenas em Santa Catarina houve diferença na severidade entre as brássicas, sendo registrados os menores níveis em couve-chinesa. Não foram constatadas correlações significativas entre os níveis de severidade da alternariose e da podridão negra, bem como da severidade destas com o número total de plantas e a idade das plantas nos cultivos.The objective of this research was to evaluate the intensity of Alternaria black spot, caused by Alternaria brassicicola and/or Alternaria brassicae, and black rot, caused by Xanthomonas campestris pv. campestris in organic cultivation of brassicas in Pernambuco and Santa Catarina. The survey was carried aut from November 2001 to February 2002, in 103 fields under

  20. Genetic diversity and relationships among cabbage ( Brassica ...

    African Journals Online (AJOL)

    The integration of our data with historical documents confirmed that traditional cabbage landraces cultivated in North of China were first introduced from Russia. Key words: Amplified fragment length polymorphism (AFLP), genetic diversity, cabbage (Brassica oleracea var. capitata), landraces, population structure.

  1. Response of oilseed Brassica cultivars to ozone

    Energy Technology Data Exchange (ETDEWEB)

    Hucl, P.; Beversdorf, W.D

    1993-10-01

    Research was conducted to determine the sensitivity of four Brassica oilseed crops to ozone under controlled environmental conditions. Cultivars of four Brassica oilseed species were exposed to acute levels of ozone (0.31 or 0.47 [mu]l/l) at the seedling stage. Brassica hirta BHL-926 was the most sensitive to ozone, followed by B. juncea (Newton) and B. rapa (Torch). Injury symptoms ranged from a slight stippling in insensitive species to large bifacial necrotic patches in the most sensitive species. Brassica napus (canola) seedlings exhibited very little foliar injury (0-4% after 24 h exposure to 0.31 [mu]l/l ozone). In Ontario, where a vast majority of canola acreage is seeded to B. napus cultivars, it is unlikely that canola yields are being affected by exposure to ozone. 6 refs., 1 tab.

  2. Antihypertensive and vasorelaxant effects of aqueous extract of Artemisia campestris L. from Eastern Morocco.

    Science.gov (United States)

    Dib, Ikram; Tits, Monique; Angenot, Luc; Wauters, Jean Noel; Assaidi, Asmae; Mekhfi, Hassane; Aziz, Mohammed; Bnouham, Mohammed; Legssyer, Abdelkhaleq; Frederich, Michel; Ziyyat, Abderrahim

    2017-07-12

    Artemisia campestris L. (Asteraceae) has many traditional uses, among which treatment of diabetes and hypertension. This study was conducted in order to confirm the antihypertensive and hypotensive effects of A. campestris L. aqueous extract (AcAE) and to explore the underlying mechanism of action of its vasorelaxant effect, besides the acute toxicity. Also, the chemical composition of AcAE was investigated. the chemical content of AcAE was determined by using HPLC and NMR techniques. The antihypertensive effect was assessed indirectly by tail-cuff method on L-NAME induced hypertensive rats, while the hypotensive action was monitored intravenously by invasive method on normotensive rats. The vasorelaxant effect and vascular mechanism of action were studied in the presence of antagonists and blockers on aorta isolated from normotensive rats. On the other side, the acute toxicity was studied by oral feeding of extract to the mice. The global phytochemical profile of AcAE reveals the presence of several polyphenols as main components. A. campestris L. infusion was characterized by mono- and di-cinnamoyl compounds, with 3,5-dicaffeoylquinic (isochlorogenic A) acid being the main compound, followed by 5-caffeoylquinic (chlorogenic) acid. Vicenin-2 (apigenin 6,8-di-C-glucoside) appeared to be the most abundant compound among flavonoids. The daily treatment with AcAE at 150mg/kg/day prevented the installation of hypertension on L-NAME hypertensive rats, and reduced SBP from 172mmHg up to 144mmHg. At the dose 40mg/kg, AcAE provoked reduction of systolic (SBP), diastolic (DBP) and mean arterial pressure (MAP), without affecting the heart rate. Also, AcAE (10 -2 -2mg/ml) relaxed the precontracted aorta by 95.8±1.3%. The denudation and preincubation of aorta with atropine, calmidazolium, L-NAME, hydroxycobalamin, ODQ, 8-RP-Br-PET-cGMP, thapsigargin and verapamil attenuated the vasorelaxant response, while the pre-treatment with 4-AP, TEA, glibenclamide and BaCl 2 did not

  3. Tronchuda cabbage flavonoids uptake by Pieris brassicae

    OpenAIRE

    Ferreres, F.; Sousa, C.; Valentão, P.; PEREIRA, J. A.; Seabra, R.M.; Andrade, P.B.

    2007-01-01

    The flavonoid pattern of larvae of cabbage white butterfly (Pieris brassicae L.; Lepidoptera: Pieridae) reared on the leaves of tronchuda cabbage was analysed by HPLC-DAD-MS/MS-ESI. Twenty flavonoids were identified or characterised, namely 16 kaempferol and four quercetin derivatives. Kaempferol 3-O-sophoroside, a minor component of tronchuda cabbage, was found to be the main component in P. brassicae (15.8%). Apart from this, only two other flavonoids present in significant amounts...

  4. Amplifying recombination genome-wide and reshaping crossover landscapes in Brassicas.

    Directory of Open Access Journals (Sweden)

    Alexandre Pelé

    2017-05-01

    Full Text Available Meiotic recombination by crossovers (COs is tightly regulated, limiting its key role in producing genetic diversity. However, while COs are usually restricted in number and not homogenously distributed along chromosomes, we show here how to disrupt these rules in Brassica species by using allotriploid hybrids (AAC, 2n = 3x = 29, resulting from the cross between the allotetraploid rapeseed (B. napus, AACC, 2n = 4x = 38 and one of its diploid progenitors (B. rapa, AA, 2n = 2x = 20. We produced mapping populations from different genotypes of both diploid AA and triploid AAC hybrids, used as female and/or as male. Each population revealed nearly 3,000 COs that we studied with SNP markers well distributed along the A genome (on average 1 SNP per 1.25 Mbp. Compared to the case of diploids, allotriploid hybrids showed 1.7 to 3.4 times more overall COs depending on the sex of meiosis and the genetic background. Most surprisingly, we found that such a rise was always associated with (i dramatic changes in the shape of recombination landscapes and (ii a strong decrease of CO interference. Hybrids carrying an additional C genome exhibited COs all along the A chromosomes, even in the vicinity of centromeres that are deprived of COs in diploids as well as in most studied species. Moreover, in male allotriploid hybrids we found that Class I COs are mostly responsible for the changes of CO rates, landscapes and interference. These results offer the opportunity for geneticists and plant breeders to dramatically enhance the generation of diversity in Brassica species by disrupting the linkage drag coming from limits on number and distribution of COs.

  5. A high-density SNP map for accurate mapping of seed fibre QTL in Brassica napus L.

    Directory of Open Access Journals (Sweden)

    Liezhao Liu

    Full Text Available A high density genetic linkage map for the complex allotetraploid crop species Brassica napus (oilseed rape was constructed in a late-generation recombinant inbred line (RIL population, using genome-wide single nucleotide polymorphism (SNP markers assayed by the Brassica 60 K Infinium BeadChip Array. The linkage map contains 9164 SNP markers covering 1832.9 cM. 1232 bins account for 7648 of the markers. A subset of 2795 SNP markers, with an average distance of 0.66 cM between adjacent markers, was applied for QTL mapping of seed colour and the cell wall fiber components acid detergent lignin (ADL, cellulose and hemicellulose. After phenotypic analyses across four different environments a total of 11 QTL were detected for seed colour and fiber traits. The high-density map considerably improved QTL resolution compared to the previous low-density maps. A previously identified major QTL with very high effects on seed colour and ADL was pinpointed to a narrow genome interval on chromosome A09, while a minor QTL explaining 8.1% to 14.1% of variation for ADL was detected on chromosome C05. Five and three QTL accounting for 4.7% to 21.9% and 7.3% to 16.9% of the phenotypic variation for cellulose and hemicellulose, respectively, were also detected. To our knowledge this is the first description of QTL for seed cellulose and hemicellulose in B. napus, representing interesting new targets for improving oil content. The high density SNP genetic map enables navigation from interesting B. napus QTL to Brassica genome sequences, giving useful new information for understanding the genetics of key seed quality traits in rapeseed.

  6. A high-density SNP map for accurate mapping of seed fibre QTL in Brassica napus L.

    Science.gov (United States)

    Liu, Liezhao; Qu, Cunmin; Wittkop, Benjamin; Yi, Bin; Xiao, Yang; He, Yajun; Snowdon, Rod J; Li, Jiana

    2013-01-01

    A high density genetic linkage map for the complex allotetraploid crop species Brassica napus (oilseed rape) was constructed in a late-generation recombinant inbred line (RIL) population, using genome-wide single nucleotide polymorphism (SNP) markers assayed by the Brassica 60 K Infinium BeadChip Array. The linkage map contains 9164 SNP markers covering 1832.9 cM. 1232 bins account for 7648 of the markers. A subset of 2795 SNP markers, with an average distance of 0.66 cM between adjacent markers, was applied for QTL mapping of seed colour and the cell wall fiber components acid detergent lignin (ADL), cellulose and hemicellulose. After phenotypic analyses across four different environments a total of 11 QTL were detected for seed colour and fiber traits. The high-density map considerably improved QTL resolution compared to the previous low-density maps. A previously identified major QTL with very high effects on seed colour and ADL was pinpointed to a narrow genome interval on chromosome A09, while a minor QTL explaining 8.1% to 14.1% of variation for ADL was detected on chromosome C05. Five and three QTL accounting for 4.7% to 21.9% and 7.3% to 16.9% of the phenotypic variation for cellulose and hemicellulose, respectively, were also detected. To our knowledge this is the first description of QTL for seed cellulose and hemicellulose in B. napus, representing interesting new targets for improving oil content. The high density SNP genetic map enables navigation from interesting B. napus QTL to Brassica genome sequences, giving useful new information for understanding the genetics of key seed quality traits in rapeseed.

  7. Genetic analysis of resistance to clubroot (Plasmodiophora brassicae) in Brassica oleracea. 1. Analysis of symptom grades

    NARCIS (Netherlands)

    Voorrips, R.E.; Kanne, H.J.

    1997-01-01

    The inheritance of resistance to clubroot, caused by Plasmodiophora brassicae, in Brassica oleracea was studied in the F1, F2and backcross progenies of four crosses between resistant and susceptible doubled haploid lines. The disease severity was scored visually on a 0–3 scale of symptom grades.

  8. Clubroot in the cole crops : the interaction between Plasmodiophora brassicae and Brassica oleracea

    NARCIS (Netherlands)

    Voorrips, R.E.

    1996-01-01

    The clubroot disease of the cole crops ( Brassica oleracea ) and other crucifers is caused by the fungus Plasmodiophora brassicae . It is an important disease, affecting an estimated 10 % of the total cultured area world-wide. The potential of

  9. Ozone affects growth and development of Pieris brassicae on the wild host plant Brassica nigra

    NARCIS (Netherlands)

    Khaling, E.; Papazian, S.; Poelman, E.H.; Holopainen, J.K.; Albrectsen, B.R.; Blande, J.D.

    2015-01-01

    When plants are exposed to ozone they exhibit changes in both primary and secondary metabolism, which may affect their interactions with herbivorous insects. Here we investigated the performance and preferences of the specialist herbivore Pieris brassicae on the wild plant Brassica nigra under

  10. Green Sonoextraction of Protein from Oleaginous Press Rapeseed Cake

    Directory of Open Access Journals (Sweden)

    Meryem Boukroufa

    2017-01-01

    Full Text Available In this study, extraction of soluble proteins from rapeseed cake using different conventional and innovative extraction processes in order to maximize the extraction yield has been investigated. Firstly, various extraction techniques including ultrasound, microwave, and percolation were tested to increase the protein recovery efficiency. Secondly, response surface methodology (RSM using a central composite design (CCD approach was applied to investigate the influence of process variables on ultrasound-assisted extraction (UAE. Statistical analysis revealed that the optimized conditions providing a protein yield of 4.24 g/100 g DM were an ultrasound power of 5.6 W·cm−2 and temperature of 45 °C. Quantitatively UAE followed by two stages of conventional extraction gave the best total protein yield of 9.81 g/100 g DM. Qualitatively, the protein efficiency ratio (PER used as measure of the nutritive value (12S/2S ratio which indicates protein quality in terms of S-containing essential amino acids, was similar to that of the conventional extraction method. Small amounts of protein aggregate were observed in the HPLC profile of the extract.

  11. Canola/rapeseed protein-functionality and nutrition

    Directory of Open Access Journals (Sweden)

    Wanasundara Janitha P.D.

    2016-07-01

    Full Text Available Protein rich meal is a valuable co-product of canola/rapeseed oil extraction. Seed storage proteins that include cruciferin (11S and napin (2S dominate the protein complement of canola while oleosins, lipid transfer proteins and other minor proteins of non-storage nature are also found. Although oil-free canola meal contains 36–40% protein on a dry weight basis, non-protein components including fibre, polymeric phenolics, phytates and sinapine, etc. of the seed coat and cellular components make protein less suitable for food use. Separation of canola protein from non-protein components is a technical challenge but necessary to obtain full nutritional and functional potential of protein. Process conditions of raw material and protein preparation are critical of nutritional and functional value of the final protein product. The storage proteins of canola can satisfy many nutritional and functional requirements for food applications. Protein macromolecules of canola also provide functionalities required in applications beyond edible uses; there exists substantial potential as a source of plant protein and a renewable biopolymer. Available information at present is mostly based on the protein products that can be obtained as mixtures of storage protein types and other chemical constituents of the seed; therefore, full potential of canola storage proteins is yet to be revealed.

  12. Rapeseed Oil as Renewable Resource for Polyol Synthesis

    Science.gov (United States)

    Stirna, Uldis; Fridrihsone, Anda; Misane, Marija; Vilsone, Dzintra

    2011-01-01

    Vegetable oils are one of the most important platform chemicals due to their accessibility, specific structure of oils and low price. Rapeseed oil (RO) polyols were prepared by amidization of RO with diethanolamine (DEA). To determine the kinetics of amidization reaction, experiments were carried out. Fourier transform infrared spectroscopy (FTIR), differential scanning calorimetry (DSC), amine (NH) value was determined. Group contribution method by Fedor‵s was used to calculate solubility parameters, van der Waals volume was calculated by Askadskii. Obtained polyol‵s OH and NH value are from 304 up to 415 mg KOH/g. RO polyols synthesis meets the criteria of "green chemistry". In the present study, reaction of RO amidization with DEA was investigated, as well as optimum conditions for polyol synthesis was established to obtain polyols for polyurethane production. Calculations of solubility parameter and cohesion energy density were calculated, as RO polyols will be used as side chains in polymers, and solubility parameter will be used to explain properties of polymers.

  13. Detection of Water Content in Rapeseed Leaves Using Terahertz Spectroscopy

    Directory of Open Access Journals (Sweden)

    Pengcheng Nie

    2017-12-01

    Full Text Available The terahertz (THz spectra of rapeseed leaves with different water content (WC were investigated. The transmission and absorption spectra in the range of 0.3–2 THz were measured by using THz time-domain spectroscopy. The mean transmittance and absorption coefficients were applied to analyze the change regulation of WC. In addition, the Savitzky-Golay method was performed to preprocess the spectra. Then, the partial least squares (PLS, kernel PLS (KPLS, and Boosting-PLS were conducted to establish models for predicting WC based on the processed transmission and absorption spectra. Reliable results were obtained by these three methods. KPLS generated the best prediction accuracy of WC. The prediction coefficient correlation (Rval and root mean square error (RMSEP of KPLS based on transmission were Rval = 0.8508, RMSEP = 0.1015, and that based on absorption were Rval = 0.8574, RMSEP = 0.1009. Results demonstrated that THz spectroscopy combined with modeling methods provided an efficient and feasible technique for detecting plant physiological information.

  14. Tribological characteristics of monodispersed cerium borate nanospheres in biodegradable rapeseed oil lubricant

    Energy Technology Data Exchange (ETDEWEB)

    Boshui, Chen, E-mail: boshuichen@163.com; Kecheng, Gu; Jianhua, Fang; Jiang, Wu; Jiu, Wang; Nan, Zhang

    2015-10-30

    Graphical abstract: - Highlights: • Monodispersed stearic acid-capped cerium borate composite nanoparticles were prepared by hydrothermal method. Their morphologies, element compositions, size distributions, crystal and chemical structures, hydrophobic characteristics were also characterized. • The surface-capped cerium borate nanoparticles exhibited excellent dispersing stability in rapeseed oil. As new lubricating additives, they were also outstanding in enhancing friction-reducing and anti-wear capacities of rapeseed oil in biodegradable rapeseed oil. The results presented in this paper would be of important significance for developing green lubricants and lubricant additives. • The prominent tribological performances of SA/CeBO{sub 3} in rapeseed oil were investigated and attributed to the formation of a composite boundary lubrication film mainly composed of lubricous tribochemical species on the tribo-surfaces. - Abstract: Stearic acid-capped cerium borate composite nanoparticles, abbreviated as SA/CeBO{sub 3}, were prepared by hydrothermal method. The morphologies, element compositions, size distributions, crystal and chemical structures, hydrophobic characteristics, of SA/CeBO{sub 3} were characterized by scanning electron microscope, energy dispersive X-ray spectrometer, dynamic laser particle size analyzer, X-ray diffraction, and Fourier transform infrared spectrometer, respectively. The friction and wear performances of SA/CeBO{sub 3} as a lubricating additive in a rapeseed oil were evaluated on a four-ball tribo-tester. The tribochemical characteristics of the worn surfaces were investigated by X-ray photoelectron spectroscopy. The results showed that the hydrophobic SA/CeBO{sub 3} were monodispersed nanospheres with an average diameter of 8 nm, and exhibited excellent dispersing stability in rapeseed oil. Meanwhile, SA/CeBO{sub 3} nanospheres were outstanding in enhancing friction-reducing and anti-wear capacities of rapeseed oil. The prominent

  15. Tribological characteristics of monodispersed cerium borate nanospheres in biodegradable rapeseed oil lubricant

    Science.gov (United States)

    Boshui, Chen; Kecheng, Gu; Jianhua, Fang; Jiang, Wu; Jiu, Wang; Nan, Zhang

    2015-10-01

    Stearic acid-capped cerium borate composite nanoparticles, abbreviated as SA/CeBO3, were prepared by hydrothermal method. The morphologies, element compositions, size distributions, crystal and chemical structures, hydrophobic characteristics, of SA/CeBO3 were characterized by scanning electron microscope, energy dispersive X-ray spectrometer, dynamic laser particle size analyzer, X-ray diffraction, and Fourier transform infrared spectrometer, respectively. The friction and wear performances of SA/CeBO3 as a lubricating additive in a rapeseed oil were evaluated on a four-ball tribo-tester. The tribochemical characteristics of the worn surfaces were investigated by X-ray photoelectron spectroscopy. The results showed that the hydrophobic SA/CeBO3 were monodispersed nanospheres with an average diameter of 8 nm, and exhibited excellent dispersing stability in rapeseed oil. Meanwhile, SA/CeBO3 nanospheres were outstanding in enhancing friction-reducing and anti-wear capacities of rapeseed oil. The prominent tribological performances of SA/CeBO3 in rapeseed oil were attributed to the formation of a composite boundary lubrication film mainly composed of lubricous tribochemical species of B2O3, CeO2 and Fe2O3, and the adsorbates of SA/CeBO3 and rapeseed oil, on the tribo-surfaces.

  16. Genetic variation in glucosinolate content within Brassica rapa vegetables

    NARCIS (Netherlands)

    He, H.; Ping, L.; Bonnema, G.; Dekker, M.; Verkerk, R.

    2012-01-01

    Glucosinolates (GSs) were analyzed in 56 accessions of Brassica rapa grown in the greenhouse. Eight different glucosinolates were identified in the Brassica rapa group. They are the aliphatic glucosinolates progoitrin (PRO), gluconapin (NAP), glucobrassicanapin (GBN), the indolyl glucosinolates

  17. A 3.9-kb DNA region of Xanthomonas campestris pv. campestris that is necessary for lipopolysaccharide production encodes a set of enzymes involved in the synthesis of dTDP-rhamnose.

    Science.gov (United States)

    Köplin, R; Wang, G; Hötte, B; Priefer, U B; Pühler, A

    1993-12-01

    By mutational analysis it was found that a 3.9-kb SmaI-XhoII DNA fragment of Xanthomonas campestris pv. campestris is involved in lipopolysaccharide (LPS) biosynthesis. LPS samples isolated from different mutants carrying mutations in the 3.9-kb SmaI-XhoII DNA fragment exhibited banding patterns in silver-stained sodium dodecyl sulfate-polyacrylamide gels markedly different from that of the wild-type LPS. Moreover, comparison of the monosaccharide composition obtained by high-performance anion-exchange chromatography with pulsed amperometric detection of LPS purified from wild-type Xanthomonas campestris pv. campestris B100 and from mutants with mutations in the 3.9-kb SmaI-XhoII DNA fragment revealed a lack of rhamnose moieties in the mutant LPS. Sequence analysis of this DNA fragment revealed four open reading frames (ORFs), designated ORF302, ORF183, ORF295, and ORF351. The deduced amino acid sequences of these ORFs showed a high degree of homology to the deduced amino acid sequences of the rfbC, rfbD, rfbA, and rfbB genes of Salmonella typhimurium LT2, which have been shown to encode a set of enzymes responsible for conversion of glucose 1-phosphate to dTDP-rhamnose.

  18. hpaR, a putative marR family transcriptional regulator, is positively controlled by HrpG and HrpX and involved in the pathogenesis, hypersensitive response, and extracellular protease production of Xanthomonas campestris pathovar campestris.

    Science.gov (United States)

    Wei, Ke; Tang, Dong-Jie; He, Yong-Qiang; Feng, Jia-Xun; Jiang, Bo-Le; Lu, Guang-Tao; Chen, Baoshan; Tang, Ji-Liang

    2007-03-01

    The MarR family of transcriptional regulators of bacteria are involved in the regulation of many cellular processes, including pathogenesis. In this work, we have demonstrated genetically that hpaR (hpa, hrp associated), which encodes a putative MarR family regulator, is involved in the hypersensitive response (HR), pathogenicity, and extracellular protease production of the phytopathogenic bacterium Xanthomonas campestris pathovar campestris. A mutation in hpaR resulted in complete loss of virulence in the host plant cabbage, a delayed and weakened HR in the nonhost plant pepper ECW-10R, and an increase in extracellular protease production. Detection of the beta-glucuronidase activity of a plasmid-driven hpaR promoter-gusA reporter revealed that the expression of hpaR is positively controlled by HrpG and HrpX and is suppressed in rich medium while being strongly induced in minimal and hrp-inducing media and inside the host. These findings indicate that hpaR belongs to the hrpG and hrpX regulon and that HrpX regulates the extracellular protease production via hpaR in X. campestris pv. campestris.

  19. Chitinase-mediated inhibitory activity of Brassica transgenic on growth of Alternaria brassicae.

    Science.gov (United States)

    Mondal, Kalyan K; Chatterjee, Subhas Chandra; Viswakarma, Navin; Bhattacharya, Ram Charan; Grover, Anita

    2003-09-01

    Chitinase, capable of degrading the cell walls of invading phytopathogenic fungi, plays an important role in plant defense response, particularly when this enzyme is overexpressed through genetic engineering. In the present study, Brassica plant (Brassica juncea L.) was transformed with chitinase gene tagged with an overexpressing promoter 35 S CaMV. The putative transgenics were assayed for their inhibitory activity against Alternaria brassicae, the inducer of Alternaria leaf spot of Brassica both in vitro and under polyhouse conditions. In in vitro fungal growth inhibition assays, chitinase inhibited the fungal colony size by 12-56% over the non-trangenic control. The bioassay under artificial epiphytotic conditions revealed the delay in the onset of disease as well as reduced lesion number and size in 35S-chitinase Brassica as compared to the untransformed control plants.

  20. SSR marker variations in Brassica species provide insight into the origin and evolution of Brassica amphidiploids.

    Science.gov (United States)

    Thakur, Ajay Kumar; Singh, Kunwar Harendra; Singh, Lal; Nanjundan, Joghee; Khan, Yasin Jeshima; Singh, Dhiraj

    2018-01-01

    Oilseed Brassica represents an important group of oilseed crops with a long history of evolution and cultivation. To understand the origin and evolution of Brassica amphidiploids, simple sequence repeat (SSR) markers were used to unravel genetic variations in three diploids and three amphidiploid Brassica species of U's triangle along with Eruca sativa as an outlier. Of 124 Brassica-derived SSR loci assayed, 100% cross-transferability was obtained for B. juncea and three subspecies of B. rapa, while lowest cross-transferability (91.93%) was obtained for Eruca sativa. The average % age of cross-transferability across all the seven species was 98.15%. The number of alleles detected at each locus ranged from one to six with an average of 3.41 alleles per primer pair. Neighbor-Joining-based dendrogram divided all the 40 accessions into two main groups composed of B. juncea/B. nigra/B. rapa and B. carinata/B. napus/B. oleracea. C-genome of oilseed Brassica species remained relatively more conserved than A- and B-genome. A- genome present in B. juncea and B. napus seems distinct from each other and hence provides great opportunity for generating diversity through synthesizing amphidiploids from different sources of A- genome. B. juncea had least intra-specific distance indicating narrow genetic base. B. rapa appears to be more primitive species from which other two diploid species might have evolved. The SSR marker set developed in this study will assist in DNA fingerprinting of various Brassica species cultivars, evaluating the genetic diversity in Brassica germplasm, genome mapping and construction of linkage maps, gene tagging and various other genomics-related studies in Brassica species. Further, the evolutionary relationship established among various Brassica species would assist in formulating suitable breeding strategies for widening the genetic base of Brassica amphidiploids by exploiting the genetic diversity present in diploid progenitor gene pools.

  1. Biogenic greenhouse gas emissions linked to the life cycles of biodiesel derived from European rapeseed and Brazilian soybeans

    NARCIS (Netherlands)

    Reijnders, L.; Huijbregts, M.A.J.

    2008-01-01

    Biogenic emissions of carbonaceous greenhouse gases and N2O turn out to be important determinants of life cycle emissions of greenhouse gases linked to the life cycle of biodiesel from European rapeseed and Brazilian soybeans. For biodiesel from European rapeseed and for biodiesel from Brazilian

  2. Comparative transcriptome analysis reveals carbohydrate and lipid metabolism blocks in Brassica napus L. male sterility induced by the chemical hybridization agent monosulfuron ester sodium.

    Science.gov (United States)

    Li, Zhanjie; Cheng, Yufeng; Cui, Jianmin; Zhang, Peipei; Zhao, Huixian; Hu, Shengwu

    2015-03-17

    Chemical hybridization agents (CHAs) are often used to induce male sterility for the production of hybrid seeds. We previously discovered that monosulfuron ester sodium (MES), an acetolactate synthase (ALS) inhibitor of the herbicide sulfonylurea family, can induce rapeseed (Brassica napus L.) male sterility at approximately 1% concentration required for its herbicidal activity. To find some clues to the mechanism of MES inducing male sterility, the ultrastructural cytology observations, comparative transcriptome analysis, and physiological analysis on carbohydrate content were carried out in leaves and anthers at different developmental stages between the MES-treated and mock-treated rapeseed plants. Cytological analysis revealed that the plastid ultrastructure was abnormal in pollen mother cells and tapetal cells in male sterility anthers induced by MES treatment, with less material accumulation in it. However, starch granules were observed in chloroplastids of the epidermis cells in male sterility anthers. Comparative transcriptome analysis identified 1501 differentially expressed transcripts (DETs) in leaves and anthers at different developmental stages, most of these DETs being localized in plastid and mitochondrion. Transcripts involved in metabolism, especially in carbohydrate and lipid metabolism, and cellular transport were differentially expressed. Pathway visualization showed that the tightly regulated gene network for metabolism was reprogrammed to respond to MES treatment. The results of cytological observation and transcriptome analysis in the MES-treated rapeseed plants were mirrored by carbohydrate content analysis. MES treatment led to decrease in soluble sugars content in leaves and early stage buds, but increase in soluble sugars content and decrease in starch content in middle stage buds. Our integrative results suggested that carbohydrate and lipid metabolism were influenced by CHA-MES treatment during rapeseed anther development, which might

  3. Regulation of the synthesis of cyclic glucan in Xanthomonas campestris by a diffusible signal molecule.

    Science.gov (United States)

    Vojnov, A A; Slater, H; Newman, M A; Daniels, M J; Dow, J M

    2001-12-01

    The rpf gene cluster of Xanthomonas campestris pv. campestris is involved in the co-ordinate positive regulation of the production of extracellular enzymes and the extracellular polysaccharide xanthan. Several of the rpf genes are involved in a regulatory system involving the small diffusible molecule DSF (for diffusible signal factor). Synthesis of DSF requires RpfF, and a two-component sensory transduction system involving RpfC has been implicated in the perception of the signal and signal transduction. Here we show that mutations in both rpfF and rpfC lead to reductions in the levels of cyclic glucan. The levels of cyclic glucan synthetase in membrane preparations from rpfF and rpfC mutants were, however, unaltered from the wild-type. Similar alterations in the level of cyclic glucan without changes in cyclic glucan synthetase activity were seen when wild-type bacteria were exposed to osmotic stress. These results extend the range of cellular functions subject to regulation by the rpf genes and DSF system.

  4. Pyranose Dehydrogenase from Agaricus campestris and Agaricus xanthoderma: Characterization and Applications in Carbohydrate Conversions

    Directory of Open Access Journals (Sweden)

    Clemens K. Peterbauer

    2013-08-01

    Full Text Available Pyranose dehydrogenase (PDH is a flavin-dependent sugar oxidoreductase that is limited to a rather small group of litter-degrading basidiomycetes. The enzyme is unable to utilize oxygen as an electron acceptor, using substituted benzoquinones and (organo metal ions instead. PDH displays a broad substrate specificity and intriguing variations in regioselectivity, depending on substrate, enzyme source and reaction conditions. In contrast to the related enzyme pyranose 2-oxidase (POx, PDHs from several sources are capable of oxidizing α- or β-1→4-linked di- and oligosaccharides, including lactose. PDH from A. xanthoderma is able to perform C-1 and C-2 oxidation, producing, in addition to lactobionic acid, 2-dehydrolactose, an intermediate for the production of lactulose, whereas PDH from A. campestris oxidizes lactose nearly exclusively at the C-1 position. In this work, we present the isolation of PDH-encoding genes from A. campestris (Ac and A. xanthoderma (Ax and a comparison of other so far isolated PDH-sequences. Secretory overexpression of both enzymes in Pichia pastoris was successful when using their native signal sequences with yields of 371 U·L−1 for AxPDH and 35 U·L−1 for AcPDH. The pure enzymes were characterized biochemically and tested for applications in carbohydrate conversion reactions of industrial relevance.

  5. Production of xanthan gum by free and immobilized cells of Xanthomonas campestris and Xanthomonas pelargonii.

    Science.gov (United States)

    Niknezhad, Seyyed Vahid; Asadollahi, Mohammad Ali; Zamani, Akram; Biria, Davoud

    2016-01-01

    Production of xanthan gum using immobilized cells of Xanthomonas campestris and Xanthomonas pelargonii grown on glucose or hydrolyzed starch as carbon sources was investigated. Calcium alginate (CA) and calcium alginate-polyvinyl alcohol-boric acid (CA-PVA) beads were used for the immobilization of cells. Xanthan titers of 8.2 and 9.2g/L were obtained for X. campestris cells immobilized in CA-PVA beads using glucose and hydrolyzed starch, respectively, whereas those for X. pelargonii were 8 and 7.9 g/L, respectively. Immobilized cells in CA-PVA beads were successfully employed in three consecutive cycles for xanthan production without any noticeable degradation of the beads whereas the CA beads were broken after the first cycle. The results of this study suggested that immobilized cells are advantageous over the free cells for xanthan production. Also it was shown that the cells immobilized in CA-PVA beads are more efficient than cells immobilized in CA beads for xanthan production. Copyright © 2015 Elsevier B.V. All rights reserved.

  6. Baby leaf lettuce germplasm enhancement: developing diverse populations with resistance to bacterial leaf spot caused by Xanthomonas campestris pv. vitians

    Science.gov (United States)

    Baby leaf lettuce cultivars with resistance to bacterial leaf spot (BLS) caused by Xanthomonas campestris pv. vitians (Xcv) are needed to reduce crop losses. The objectives of this research were to assess the genetic diversity for BLS resistance in baby leaf lettuce cultivars and to select early gen...

  7. Asteraceae Artemisia campestris and Artemisia herba-alba Essential Oils Trigger Apoptosis and Cell Cycle Arrest in Leishmania infantum Promastigotes

    Science.gov (United States)

    Messaoud, Chokri; Haoues, Meriam; Neffati, Noura; Bassoumi Jamoussi, Imen; Essafi-Benkhadir, Khadija; Boussaid, Mohamed; Karoui, Habib

    2016-01-01

    We report the chemical composition and anti-Leishmania and antioxidant activity of Artemisia campestris L. and Artemisia herba-alba Asso. essential oils (EOs). Our results showed that these extracts exhibit different antioxidant activities according to the used assay. The radical scavenging effects determined by DPPH assay were of IC50 = 3.3 mg/mL and IC50 = 9.1 mg/mL for Artemisia campestris and Artemisia herba-alba essential oils, respectively. However, antioxidant effects of both essential oils, determined by ferric-reducing antioxidant power (FRAP) assay, were in the same range (2.3 and 2.97 mg eq EDTA/g EO, resp.), while the Artemisia herba-alba essential oil showed highest chelating activity of Fe2+ ions (27.48 mM Fe2+). Interestingly, we showed that both EOs possess dose-dependent activity against Leishmania infantum promastigotes with IC50 values of 68 μg/mL and 44 μg/mL for A. herba-alba and A. campestris, respectively. We reported, for the first time, that antileishmanial activity of both EOs was mediated by cell apoptosis induction and cell cycle arrest at the sub-G0/G1 phase. All our results showed that EOs from A. herba-alba and A. campestris plants are promising candidates as anti-Leishmania medicinal products. PMID:27807464

  8. Identification of Aedes campestris from New Mexico: with notes on the isolation of western equine encephalitis and other arboviruses.

    Science.gov (United States)

    Clark, G G; Crabbs, C L; Bailey, C L; Calisher, C H; Craig, G B

    1986-12-01

    An arbovirus survey was conducted during August 1985 at White Sands Missile Range in southcentral New Mexico following a suspected arboviral disease epizootic among feral horses. A total of 20,566 mosquitoes (18,505 females and 2,061 males) and 8,900 biting gnats were collected and assayed for virus. Female mosquitoes were principally Aedes campestris (54.8%), Aedes dorsalis (30.4%) and Culex tarsalis (13.2%). Arboviruses were not isolated from biting gnats, but mosquitoes yielded a total of 37 viral isolates, including western equine encephalitis (WEE) (18), California serogroup (15), Cache Valey (1), and Hart Park (1) viruses in addition to 2, as yet unidentified, rhabdoviruses. Isolates of WEE virus were from 9 pools of Ae. campestris, 6 of Cx. tarsalis and 3 of Ae. dorsalis. California serogroup viruses, including 2 subtypes, were obtained from 7 pools of females and 1 pool of males of Ae. campestris and from 4 pools of Ae. dorsalis. Cache Valley and Hart Park viruses were isolated from single pools of Ae. dorsalis and Cx. tarsalis, respectively, and the rhabdoviruses were obtained from Ae. campestris and Psorophora signipennis.

  9. Cloning of a two-component signal transduction system of Xanthomonas campestris pv. phaseoli var. fuscans strain BXPF65

    DEFF Research Database (Denmark)

    Chan, JWYF; Maynard, Scott; Goodwin, PH

    1998-01-01

    A putative two-component signal transduction system was amplified and cloned from the plant pathogenic bacterium Xanthomonas campestris pv. phaseoli var. fuscans isolate BXPF65. The 620 bp amplified fragment was sequenced and analyzed with the BLAST Enhanced Alignment Utility (BEAUTY). BEAUTY ana...

  10. The inheritance of resistance to bacterial leaf spot of lettuce caused by Xanthomonas campestris pv. vitians in three lettuce cultivars

    Science.gov (United States)

    Lettuce yields can be reduced by the disease bacterial leaf spot (BLS) caused by the pathogen Xanthomonas campestris pv. vitians (Xcv) and host resistance is the most feasible method to reduce disease losses. The cultivars La Brillante, Pavane, and Little Gem express an incompatible host-pathogen in...

  11. Phylogenetic relationships within and among Brassica species from ...

    African Journals Online (AJOL)

    STORAGESEVER

    2008-05-02

    May 2, 2008 ... Brassica oleracea var. virids) and fifteen tetraploid cultivars (Brassica napus) from the national winter canola variety trials (NWCVT) were evaluated using 13 sets of random amplified polymorphic DNA. (RAPD) associated with blackleg resistance in Brassica nigra. 126 highly polymorphic bands with an.

  12. In vitro propagation of Ethiopian mustard ( Brassica carinata A ...

    African Journals Online (AJOL)

    Brassica carinata (A. Braun) is an amphi-diploid species that originated from interspecific hybridization between Brassica nigra and Brassica oleracea in the highlands of Ethiopia. The crop has many desirable agronomic traits but with oil quality constraints like high erucic acid and glucosinolate contents. In this study, two ...

  13. BrassicaTED - a public database for utilization of miniature transposable elements in Brassica species.

    Science.gov (United States)

    Murukarthick, Jayakodi; Sampath, Perumal; Lee, Sang Choon; Choi, Beom-Soon; Senthil, Natesan; Liu, Shengyi; Yang, Tae-Jin

    2014-06-20

    MITE, TRIM and SINEs are miniature form transposable elements (mTEs) that are ubiquitous and dispersed throughout entire plant genomes. Tens of thousands of members cause insertion polymorphism at both the inter- and intra- species level. Therefore, mTEs are valuable targets and resources for development of markers that can be utilized for breeding, genetic diversity and genome evolution studies. Taking advantage of the completely sequenced genomes of Brassica rapa and B. oleracea, characterization of mTEs and building a curated database are prerequisite to extending their utilization for genomics and applied fields in Brassica crops. We have developed BrassicaTED as a unique web portal containing detailed characterization information for mTEs of Brassica species. At present, BrassicaTED has datasets for 41 mTE families, including 5894 and 6026 members from 20 MITE families, 1393 and 1639 members from 5 TRIM families, 1270 and 2364 members from 16 SINE families in B. rapa and B. oleracea, respectively. BrassicaTED offers different sections to browse structural and positional characteristics for every mTE family. In addition, we have added data on 289 MITE insertion polymorphisms from a survey of seven Brassica relatives. Genes with internal mTE insertions are shown with detailed gene annotation and microarray-based comparative gene expression data in comparison with their paralogs in the triplicated B. rapa genome. This database also includes a novel tool, K BLAST (Karyotype BLAST), for clear visualization of the locations for each member in the B. rapa and B. oleracea pseudo-genome sequences. BrassicaTED is a newly developed database of information regarding the characteristics and potential utility of mTEs including MITE, TRIM and SINEs in B. rapa and B. oleracea. The database will promote the development of desirable mTE-based markers, which can be utilized for genomics and breeding in Brassica species. BrassicaTED will be a valuable repository for scientists

  14. Co-processing of olive bagasse with crude rapeseed oil via pyrolysis.

    Science.gov (United States)

    Uçar, Suat; Karagöz, Selhan

    2017-05-01

    The co-pyrolysis of olive bagasse with crude rapeseed oil at different blend ratios was investigated at 500ºC in a fixed bed reactor. The effect of olive bagasse to crude rapeseed oil ratio on the product distributions and properties of the pyrolysis products were comparatively investigated. The addition of crude rapeseed oil into olive bagasse in the co-pyrolysis led to formation of upgraded biofuels in terms of liquid yields and properties. While the pyrolysis of olive bagasse produced a liquid yield of 52.5 wt %, the highest liquid yield of 73.5 wt % was obtained from the co-pyrolysis of olive bagasse with crude rapeseed oil at a blend ratio of 1:4. The bio-oil derived from olive bagasse contained 5% naphtha, 10% heavy naphtha, 30% gas oil, and 55% heavy gas oil. In the case of bio-oil obtained from the co-pyrolysis of olive bagasse with crude rapeseed oil at a blend ratio of 1:4, the light naphtha, heavy naphtha, and light gas oil content increased. This is an indication of the improved characteristics of the bio-oil obtained from the co-processing. The heating value of bio-oil from the pyrolysis of olive bagasse alone was 34.6 MJ kg-1 and the heating values of bio-oils obtained from the co-pyrolysis of olive bagasse with crude rapeseed oil ranged from 37.6 to 41.6 MJ kg-1. It was demonstrated that the co-processing of waste biomass with crude plant oil is a good alternative to improve bio-oil yields and properties.

  15. Is chronic rapeseed oil diet more neuroprotective than chronic corn/sunflower diet?

    Directory of Open Access Journals (Sweden)

    Pages Nicole

    2007-05-01

    Full Text Available Polyunsaturated fatty acids (PUFA and specifically omega3 have been shown to exert a potent protecting effect on both cardiac and neuronal functions. Rapeseed oil contains 9% of alphalinolenic acid (18-3n-3, ALA, whereas corn and sunflower oils (18:2n-6, linoleic acid rich do not. The aim of the present study was to compare in mice the putative protective effects of ALA, by testing two chronic diets containing either rapeseed oil (ALA rich or a corn/sunflower blend (devoided of ALA using an epilepsy model, allowing the detection of neurotoxic or neuroprotective activities: the MDDAS test (Magnesium Deficiency-Dependent Audiogenic Seizure test. After a 30 day-Mg-deprivation period, neuronal hyperexcitability appeared only in the corn/sunflower fed group, suggesting a protecting effect of the rapeseed oil. The number of convulsive mice was twice reduced in the rapeseed group and all of them recovered whereas in the corn/sunflower group all the mice had seizures and 43% died. The pattern of seizures with the rapeseed diet showed an increase in the first two step durations (latency and wild running, and a non significant slight decrease in the third (convulsions and the fourth (recovery ones. These results suggest a GABAergic-like effect. The increases in the first 2 phases were also indicative of a likely effect on Na+ channels, which was also observed using the maximum electroshock seizure test. These preliminary results indicate that adapted chronic dietary intake of rapeseed oil, an ALA rich monounsaturated oil, could help to control neuronal disorders as here shown in our model of magnesium-deficient mice.

  16. Metabolic Changes during Storage of Brassica napus Seeds under Moist Conditions and the Consequences for the Sensory Quality of the Resulting Virgin Oil.

    Science.gov (United States)

    Bonte, Anja; Schweiger, Rabea; Pons, Caroline; Wagner, Claudia; Brühl, Ludger; Matthäus, Bertrand; Müller, Caroline

    2017-12-20

    Virgin rapeseed (Brassica napus) oil is a valuable niche product, if delivered with a high quality. In this study, the effects of moist storage of B. napus seeds for 1 to 4 days on the seed metabolome and the chemo-sensory properties of the produced oils were determined. The concentrations of several primary metabolites, including monosaccharides and amino acids, rapidly increased in the seeds, probably indicating the breakdown of storage compounds to support seed germination. Seed concentrations of indole glucosinolates increased with a slight time offset suggesting that amino acids may be used to modify secondary metabolism. The volatile profiles of the oils were pronouncedly influenced by moist seed storage, with the sensory quality of the oils decreasing. This study provides a direct time-resolved link between seed metabolism under moist conditions and the quality of the resulting oils, thereby emphasizing the crucial role of dry seed storage in ensuring high oil quality.

  17. Patterns of molecular variation in a species-wide germplasm set of Brassica napus.

    Science.gov (United States)

    Bus, Anja; Körber, Niklas; Snowdon, Rod J; Stich, Benjamin

    2011-12-01

    Rapeseed (Brassica napus L.) is the leading European oilseed crop serving as source for edible oil and renewable energy. The objectives of our study were to (i) examine the population structure of a large and diverse set of B. napus inbred lines, (ii) investigate patterns of genetic diversity within and among different germplasm types, (iii) compare the two genomes of B. napus with regard to genetic diversity, and (iv) assess the extent of linkage disequilibrium (LD) between simple sequence repeat (SSR) markers. Our study was based on 509 B. napus inbred lines genotyped with 89 genome-specific SSR primer combinations. Both a principal coordinate analysis and software STRUCTURE revealed that winter types, spring types, and swedes were assigned to three major clusters. The genetic diversity of winter oilseed rape was lower than the diversity found in other germplasm types. Within winter oilseed rape types, a decay of genetic diversity with more recent release dates and reduced levels of erucic acid and glucosinolates was observed. The percentage of linked SSR loci pairs in significant (r (2) > Q (95 unlinked loci pairs)) LD was 6.29% for the entire germplasm set. Furthermore, LD decayed rapidly with distance, which will allow a relatively high mapping resolution in genome-wide association studies using our germplasm set, but, on the other hand, will require a high number of markers.

  18. Piriformospora indica promotes growth, seed yield and quality of Brassica napus L.

    Science.gov (United States)

    Su, Zhen-Zhu; Wang, Ting; Shrivastava, Neeraj; Chen, You-Yuan; Liu, Xiaoxi; Sun, Chao; Yin, Yufeng; Gao, Qi-Kang; Lou, Bing-Gan

    2017-06-01

    In current scenario, crop productivity is being challenged by decreasing soil fertility. To cope up with this problem, different beneficial microbes are explored to increase the crop productivity with value additions. In this study, Brassica napus L., an important agricultural economic oilseed crop with rich source of nutritive qualities, was interacted with Piriformospora indica, a unique root colonizing fungus with wide host range and multifunctional aspects. The fungus-treated plants showed a significant increase in agronomic parameters with plant biomass, lodging-resistance, early bolting and flowering, oil yield and quality. Nutritional analysis revealed that plants treated by P. indica had reduced erucic acid and glucosinolates contents, and increased the accumulation of N, Ca, Mg, P, K, S, B, Fe and Zn elements. Low erucic acid and glucosinolates contents are important parameters for high quality oil, because oils high in erucic acid and glucosinolates are considered undesirable for human nutrition. Furthermore, the expression profiles of two encoding enzyme genes, Bn-FAE1 and BnECR, which are responsible for regulating erucic acid biosynthesis, were down-regulated at mid- and late- life stages during seeds development in colonized plants. These results demonstrated that P. indica played an important role in enhancing plant growth, rapeseed yield and quality improvement of B. napus. Copyright © 2017 Elsevier GmbH. All rights reserved.

  19. Early biochemical responses of Brassica napus var Exagone seed germination at salt treatment

    Directory of Open Access Journals (Sweden)

    Lacramioara Oprica

    2011-12-01

    Full Text Available The rapeseed is the third most important edible oil source in the world, after soybean and palm. This plant is very sensitive to salt stress throughout the growth and development cycle. Salt stress reduces plant growth and productivity and can affected several physiological and biochemical process. For this reason, this study was carried out to determine early the effects of NaCl treatment on the protein content, amylase (EC 3.2.1.1, acide phosphatase (E.C. 3.1.3.2, peroxidase (EC 1.11.1.7 and catalase (EC 1.11.1.6 in young rape plant (Brassica napus L. var Exagone. The rape seed were treated four hour with three NaCl solutions (50mM, 100mM, 150mM comparatively with a control who wasn’t exposed at treatment. Amylase activity was inhibited by all used salts concentrations at both time intervals studied. Salinity stimulated the acid phosphatase activity, more intense at 4 days and moderately at 7 days after treatment. The activity of the two assayed antioxidant enzymes (except peroxidase in the second period increase in salinity conditions with increasing salt concentration. Soluble protein content is reduced compared to the control at both studied intervals.

  20. Limpeza clonal de mudas de videira infectadas por Xanthomonas campestris pv. viticola Clonal cleaning of grapevine plants infected by Xanthomonas campestris pv. viticola

    Directory of Open Access Journals (Sweden)

    Adriano Márcio Freire Silva

    2013-03-01

    Full Text Available O cancro bacteriano da videira é causado por Xanthomonas campestris pv. viticola (Xcv. Visando à limpeza clonal de mudas de 'Red Globe', foram estudados: tamanho ideal de ápices e gemas axilares para cultivo em meio de Galzy modificado (MGM; efeito da termoterapia (38ºC/30 dias; e ação de antibióticos na eliminação de Xcv em videiras infectadas. Os percentuais de contaminação por Xcv e de regeneração foram analisados, e as plantas obtidas foram indexadas em meio ágar nutritivo-dextrose-extrato de levedura-ampicilina (NYDAM, seguindo-se teste de patogenicidade. O cultivo de explantes com 3 mm possibilitou a obtenção de plantas livres da bactéria, com regeneração 14,3 vezes maior que explantes com 1 mm. A termoterapia de mudas infectadas, associada ao cultivo in vitro, não eliminou o patógeno. O cultivo de explantes com 10 mm, durante 40 dias em MGM + cefotaxima (300 mg L-1, proporcionou limpeza clonal das mudas. A indexação de plantas de videira regeneradas in vitro, quanto à infecção por Xcv utilizando NYDAM, seguida de teste de patogenicidade, é uma alternativa econômica e eficiente para produção de mudas de alta qualidade fitossanitária.Bacterial canker is caused by Xanthomonas campestris pv. viticola (Xcv. In order to eliminate Xcv from 'Red Globe' plants it was studied: optimal size of meristem tips and axillary buds for cultivation in modified Galzy's medium (MGM; effects of thermotherapy (38ºC/30 days; and action of antibiotics in the elimination of Xcv in infected grapevines. The percentages of contamination by Xcv and regeneration were analyzed and plants obtained were indexed using the semi-selective culture medium nutrient agar-dextrose-yeast extract-ampicilin (NYDAM followed by a pathogenicity test. The cultivation of 3 mm explants permitted to obtain plants free of bacteria with regeneration 14.3 times higher than 1 mm explants. The thermotherapy of infected plants associated to the in vitro culture

  1. Unleashing the genome of Brassica rapa

    Directory of Open Access Journals (Sweden)

    Haibao eTang

    2012-07-01

    Full Text Available The completion and release of the Brassica rapa genome is of great benefit to researchers of the Brassicas, Arabidopsis, and genome evolution. While its lineage is closely related to the model organism Arabidopsis thaliana, the Brassicas experienced a whole genome triplication subsequent to their divergence. This event contemporaneously created three copies of its ancestral genome, which had diploidized through the process of homeologous gene loss known as fractionation. By the fractionation of homeologous gene content and genetic regulatory binding sites, Brassica’s genome is well placed to use comparative genomic techniques to identify syntenic regions, homeologous gene duplications, and putative regulatory sequences. Here, we use the comparative genomics platform CoGe to perform several different genomic analyses with which to study structural changes of its genome and dynamics of various genetic elements. Starting with whole genome comparisons, the Brassica paleohexaploidy is characterized, syntenic regions with Arabidopsis thaliana are identified, and the TOC1 gene in the circadian rhythm pathway from Arabidopsis thaliana is used to find duplicated orthologs in Brassica rapa. These TOC1 genes are further analyzed to identify conserved noncoding sequences that contain cis-acting regulatory elements and promoter sequences previously implicated in circadian rhythmicity. Each 'cookbook style' analysis includes a step-by-step walkthrough with links to CoGe to quickly reproduce each step of the analytical process.

  2. The BnGRF2 gene (GRF2-like gene from Brassica napus) enhances seed oil production through regulating cell number and plant photosynthesis.

    Science.gov (United States)

    Liu, Jing; Hua, Wei; Yang, Hong-Li; Zhan, Gao-Miao; Li, Rong-Jun; Deng, Lin-Bin; Wang, Xin-Fa; Liu, Gui-Hua; Wang, Han-Zhong

    2012-06-01

    Seed yield and oil content are two important agricultural characteristics in oil crop breeding, and a lot of functional gene research is being concentrated on increasing these factors. In this study, by differential gene expression analyses between rapeseed lines (zy036 and 51070) which exhibit different levels of seed oil production, BnGRF2 (Brassica napus growth-regulating factor 2-like gene) was identified in the high oil-producing line zy036. To elucidate the possible roles of BnGRF2 in seed oil production, the cDNA sequences of the rapeseed GRF2 gene were isolated. The Blastn result showed that rapeseed contained BnGRF2a/2b which were located in the A genome (A1 and A3) and C genome (C1 and C6), respectively, and the dominantly expressed gene BnGRF2a was chosen for transgenic research. Analysis of 35S-BnGRF2a transgenic Arabidopsis showed that overexpressed BnGRF2a resulted in an increase in seed oil production of >50%. Moreover, BnGRF2a also induced a >20% enlargement in extended leaves and >40% improvement in photosynthetic efficiency because of an increase in the chlorophyll content. Furthermore, transcriptome analyses indicated that some genes associated with cell proliferation, photosynthesis, and oil synthesis were up-regulated, which revealed that cell number and plant photosynthesis contributed to the increased seed weight and oil content. Because of less efficient self-fertilization induced by the longer pistil in the 35S-BnGRF2a transgenic line, Napin-BnGRF2a transgenic lines were further used to identify the function of BnGRF2, and the results showed that seed oil production also could increase >40% compared with the wild-type control. The results suggest that improvement to economically important characteristics in oil crops may be achieved by manipulation of the GRF2 expression level.

  3. Enhanced Seed Oil Production in Canola by Conditional Expression of Brassica napus LEAFY COTYLEDON1 and LEC1-LIKE in Developing Seeds1[W][OA

    Science.gov (United States)

    Tan, Helin; Yang, Xiaohui; Zhang, Fengxia; Zheng, Xiu; Qu, Cunmin; Mu, Jinye; Fu, Fuyou; Li, Jiana; Guan, Rongzhan; Zhang, Hongsheng; Wang, Guodong; Zuo, Jianru

    2011-01-01

    The seed oil content in oilseed crops is a major selection trait to breeders. In Arabidopsis (Arabidopsis thaliana), LEAFY COTYLEDON1 (LEC1) and LEC1-LIKE (L1L) are key regulators of fatty acid biosynthesis. Overexpression of AtLEC1 and its orthologs in canola (Brassica napus), BnLEC1 and BnL1L, causes an increased fatty acid level in transgenic Arabidopsis plants, which, however, also show severe developmental abnormalities. Here, we use truncated napin A promoters, which retain the seed-specific expression pattern but with a reduced expression level, to drive the expression of BnLEC1 and BnL1L in transgenic canola. Conditional expression of BnLEC1 and BnL1L increases the seed oil content by 2% to 20% and has no detrimental effects on major agronomic traits. In the transgenic canola, expression of a subset of genes involved in fatty acid biosynthesis and glycolysis is up-regulated in developing seeds. Moreover, the BnLEC1 transgene enhances the expression of several genes involved in Suc synthesis and transport in developing seeds and the silique wall. Consistently, the accumulation of Suc and Fru is increased in developing seeds of the transgenic rapeseed, suggesting the increased carbon flux to fatty acid biosynthesis. These results demonstrate that BnLEC1 and BnL1L are reliable targets for genetic improvement of rapeseed in seed oil production. PMID:21562329

  4. Enhanced seed oil production in canola by conditional expression of Brassica napus LEAFY COTYLEDON1 and LEC1-LIKE in developing seeds.

    Science.gov (United States)

    Tan, Helin; Yang, Xiaohui; Zhang, Fengxia; Zheng, Xiu; Qu, Cunmin; Mu, Jinye; Fu, Fuyou; Li, Jiana; Guan, Rongzhan; Zhang, Hongsheng; Wang, Guodong; Zuo, Jianru

    2011-07-01

    The seed oil content in oilseed crops is a major selection trait to breeders. In Arabidopsis (Arabidopsis thaliana), LEAFY COTYLEDON1 (LEC1) and LEC1-LIKE (L1L) are key regulators of fatty acid biosynthesis. Overexpression of AtLEC1 and its orthologs in canola (Brassica napus), BnLEC1 and BnL1L, causes an increased fatty acid level in transgenic Arabidopsis plants, which, however, also show severe developmental abnormalities. Here, we use truncated napin A promoters, which retain the seed-specific expression pattern but with a reduced expression level, to drive the expression of BnLEC1 and BnL1L in transgenic canola. Conditional expression of BnLEC1 and BnL1L increases the seed oil content by 2% to 20% and has no detrimental effects on major agronomic traits. In the transgenic canola, expression of a subset of genes involved in fatty acid biosynthesis and glycolysis is up-regulated in developing seeds. Moreover, the BnLEC1 transgene enhances the expression of several genes involved in Suc synthesis and transport in developing seeds and the silique wall. Consistently, the accumulation of Suc and Fru is increased in developing seeds of the transgenic rapeseed, suggesting the increased carbon flux to fatty acid biosynthesis. These results demonstrate that BnLEC1 and BnL1L are reliable targets for genetic improvement of rapeseed in seed oil production.

  5. Selection and evaluation of novel reference genes for quantitative reverse transcription PCR (qRT-PCR) based on genome and transcriptome data in Brassica napus L.

    Science.gov (United States)

    Yang, Hongli; Liu, Jing; Huang, Shunmou; Guo, Tingting; Deng, Linbin; Hua, Wei

    2014-03-15

    Selection of reference genes in Brassica napus, a tetraploid (4×) species, is a very difficult task without information on genome and transcriptome. By now, only several traditional reference genes which show significant expression differentiation under different conditions are used in B. napus. In the present study, based on genome and transcriptome data of the rapeseed Zhongshuang-11 cultivar, 14 candidate reference genes were screened for investigation in different tissues, cultivars, and treated conditions of B. napus. These genes were as follows: ELF5, ENTH, F-BOX7, F-BOX2, FYPP1, GDI1, GYF, MCP2d, OTP80, PPR, SPOC, Unknown1, Unknown2 and UBA. Among them, excluding GYF and FYPP1, another 12 genes, were identified to perform better than traditional reference genes ACTIN7 and GAPDH. To further validate the accuracy of the newly developed reference genes in normalization, expression levels of BnCAT1 (B. napus catalase 1) in different rapeseed tissues and seedlings under stress conditions were normalized by the three most stable reference genes PPR, GDI1, and ENTH and little difference existed in normalization results. To the best of our knowledge, this is the first time B. napus reference genes have been provided with the help of complete genome and transcriptome information. The new reference genes provided in this study are more accurate than previously reported reference genes in quantifying expression levels of B. napus genes. Crown Copyright © 2014. Published by Elsevier B.V. All rights reserved.

  6. Acetolactate Synthase-Inhibiting Gametocide Amidosulfuron Causes Chloroplast Destruction, Tissue Autophagy, and Elevation of Ethylene Release in Rapeseed

    Directory of Open Access Journals (Sweden)

    Xi-Qiong Liu

    2017-09-01

    Full Text Available Background: Acetolactate synthase (ALS-inhibiting herbicides amidosulfuron (Hoestar is an efficient gametocide that can induce male sterility in rapeseed (Brassica napus L.. We conducted an integrated study of cytological, transcriptomic, and physiological analysis to decipher the gametocidal effect of amidosulfuron.Results: In the first several days after exposure to amidosulfuron at a gametocidal dose of ca. 1 μg per plant, the plants showed the earliest symptoms including short retard of raceme elongation, slight chlorosis on leaf, and decrease of photosynthesis rate. Chloroplasts in leaf and anther epidermis, and tapetal plastids were deformed. Both tapetal cell and uni-nucleate microspore showed autophagic vacuoles and degenerated quickly. The amidosulfuron treatment caused reduction of photosynthetic rate and the contents of leaf chlorophyll, soluble sugar and pyruvate, as well as content alteration of several free amino acids in the treated plants. A comparison of transcriptomic profiling data of the young flower buds of the treated plants with the control identified 142 up-regulated and 201 down-regulated differential expression transcripts with functional annotations. Down-regulation of several interesting genes encoding PAIR1, SDS, PPD2, HFM1, CSTF77, A6, ALA6, UGE1, FLA20, A9, bHLH91, and putative cell wall protein LOC106368794, and up-regulation of autophagy-related protein ATG8A indicated functional abnormalities about cell cycle, cell wall formation, chloroplast structure, and tissue autophagy. Ethylene-responsive transcription factor RAP2-11-like was up-regulated in the flower buds and ethylene release rate was also elevated. The transcriptional regulation in the amidosulfuron-treated plants was in line with the cytological and physiological changes.Conclusions: The results suggested that metabolic decrease related to photosynthesis and energy supply are associated with male sterility induced by amidosulfuron. The results provide

  7. Development of immunofluorescence colony staining (IFC) for detection of Xanthomonas campestris pv. vesicatoria and Clavibacter michiganensis subsp michiganensis in tomato seeds

    NARCIS (Netherlands)

    Nemeth, J.; Vuurde, van J.W.L.

    2006-01-01

    Immunofluorescence colony-staining (IFC) is based on sample pour plating in combination with immunofluorescence staining for recognition of the target colony. IFC was optimised for detecting Xanthomonas campestris pv. vesicatoria (Xcv) and Clavibacter michiganensis subsp. michiganensis (Cmm) in

  8. Molecular evolution of virulence in natural field strains of Xanthomonas campestris pv. vesicatoria.

    Science.gov (United States)

    Gassmann, W; Dahlbeck, D; Chesnokova, O; Minsavage, G V; Jones, J B; Staskawicz, B J

    2000-12-01

    The avrBs2 avirulence gene of the bacterial plant pathogen Xanthomonas campestris pv. vesicatoria triggers disease resistance in pepper plants containing the Bs2 resistance gene and contributes to bacterial virulence on susceptible host plants. We studied the effects of the pepper Bs2 gene on the evolution of avrBs2 by characterizing the molecular basis for virulence of 20 X. campestris pv. vesicatoria field strains that were isolated from disease spots on previously resistant Bs2 pepper plants. All field strains tested were complemented by a wild-type copy of avrBs2 in their ability to trigger disease resistance on Bs2 plants. DNA sequencing revealed four mutant alleles of avrBs2, two of which consisted of insertions or deletions of 5 nucleotides in a repetitive region of avrBs2. The other two avrBs2 alleles were characterized by point mutations with resulting single amino acid changes (R403P or A410D). We generated isogenic X. campestris pv. vesicatoria strains by chromosomal avrBs2 gene exchange to study the effects of these mutations on the dual functions of avrBs2 in enhancing bacterial virulence and inducing plant resistance by in planta bacterial growth experiments. The deletion of 5 nucleotides led to loss of avrBs2-induced resistance on Bs2 pepper plants and abolition of avrBs2-mediated enhancement of fitness on susceptible plants. Significantly, the point mutations led to minimal reduction in virulence function of avrBs2 on susceptible pepper plants, with either minimal (R403P allele) or an intermediate level of (A410D allele) triggering of resistance on Bs2 plants. Consistent with the divergent selection pressures on avrBs2 exerted by the Bs2 resistance gene, our results show that avrBs2 is evolving to decrease detection by the Bs2 gene while at the same time maintaining its virulence function.

  9. Detection and identification of phytopathogenic Xanthomonas strains by amplification of DNA sequences related to the hrp genes of Xanthomonas campestris pv. vesicatoria.

    OpenAIRE

    Leite, R P; Minsavage, G. V.; Bonas, U; Stall, R. E.

    1994-01-01

    Three pairs of oligonucleotide primers specific for different regions of the hrp gene (hypersensitive reaction and pathogenicity) cluster of Xanthomonas campestris pv. vesicatoria were designed and tested for amplification of DNA isolated from a large number of different bacteria. DNA sequences related to the hrp genes were successfully amplified from X. fragariae and from 28 pathovars of X. campestris. No DNA amplification occurred with genomic DNA from phytopathogenic strains of X. campestr...

  10. Sensitive and specific detection of Xanthomonas campestris pv. pelargonii with DNA primers and probes identified by random amplified polymorphic DNA analysis.

    OpenAIRE

    Manulis, S; Valinsky, L; Lichter, A; Gabriel, D. W.

    1994-01-01

    The random amplified polymorphic DNA method was used to distinguish strains of Xanthomonas campestris pv. pelargonii from 21 other Xanthomonas species and/or pathovars. Among the 42 arbitrarily chosen primers evaluated, 3 were found to reveal diagnostic polymorphisms when purified DNAs from compared strains were amplified by the PCR. The three primers revealed DNA amplification patterns which were conserved among all 53 strains tested of X. campestris pv. pelargonii isolated from various loca...

  11. The cyclic nucleotide monophosphate domain of Xanthomonas campestris global regulator Clp defines a new class of cyclic di-GMP effectors.

    Science.gov (United States)

    Tao, Fei; He, Ya-Wen; Wu, Dong-Hui; Swarup, Sanjay; Zhang, Lian-Hui

    2010-02-01

    The widely conserved second messenger cyclic diguanosine monophosphate (c-di-GMP) plays a key role in quorum-sensing (QS)-dependent production of virulence factors in Xanthomonas campestris pv. campestris. The detection of QS diffusible signal factor (DSF) by the sensor RpfC leads to the activation of response regulator RpfG, which activates virulence gene expression by degrading c-di-GMP. Here, we show that a global regulator in the X. campestris pv. campestris QS regulatory pathway, Clp, is a c-di-GMP effector. c-di-GMP specifically binds to Clp with high affinity and induces allosteric conformational changes that abolish the interaction between Clp and its target gene promoter. Clp is similar to the cyclic AMP (cAMP) binding proteins Crp and Vfr and contains a conserved cyclic nucleotide monophosphate (cNMP) binding domain. Using site-directed mutagenesis, we found that the cNMP binding domain of Clp contains a glutamic acid residue (E99) that is essential for c-di-GMP binding. Substituting the residue with serine (E99S) resulted in decreased sensitivity to changes in the intracellular c-di-GMP level and attenuated bacterial virulence. These data establish the direct role of Clp in the response to fluctuating c-di-GMP levels and depict a novel mechanism by which QS links the second messenger with the X. campestris pv. campestris virulence regulon.

  12. Expression, purification and crystallization of the outer membrane lipoprotein GumB from Xanthomonas campestris.

    Science.gov (United States)

    Jacobs, Melisa; Salinas, Silvina R; Bianco, María I; Ielpi, Luis

    2012-10-01

    GumB is a predicted outer membrane lipoprotein that is involved in the synthesis and/or secretion of xanthan gum. This exopolysaccharide, produced by Xanthomonas campestris, is valuable in industry because of its important rheological properties. Solution of the GumB structure will provide insight into the polymerization and/or secretion mechanisms of xanthan gum. GumB was overexpressed and purified and diffraction-quality crystals of native GumB were obtained. A complete data set was collected to 2.54 Å resolution with an R(p.i.m.) of 0.034. The crystals belonged to space group P2(1)2(1)2(1), with unit-cell parameters a = 84.4, b = 90.5, c = 120.7 Å.

  13. Characteristics of denatured rapeseed oil during storage and refining processes

    Directory of Open Access Journals (Sweden)

    Philen, R. M.

    2000-10-01

    Full Text Available In 1981, toxic oil syndrome, a progressive multi-system disease caused by consumption of rapeseed oil denatured with aniline occurred in Spain. To date, the causal toxic agent or agents remain unknown. Measures of acidity, moisture, impurities, phosphorous, soaps, and spectrophotometric determinations of color at 409 nm were performed. Since fatty acid anilide concentrations in these oils are associated with risk of disease, w e studied the formation of aniline-derived compounds over time after oil denaturation and by oil deodorization temperatures (200ºC, 215ºC, 230ºC, 245ºC, 260ºC, y 270ºC and times (3, 4, 4.5, 5, 5.5 and 6 hours. Formation of fatty acid anilide compounds increased with storage time. Deodorization led to a reduction of total anilides in all the samples, particularly at temperatures above 245ºC. Esters of 3-(N-phenylamino-1,2-propanediol were not detected.En 1981 tuvo lugar en España el llamado «Síndrome del Aceite Tóxico», una enfermedad progresiva multi-sistemática causada por el consumo de aceite de colza desnaturalizado con anilina. Hasta la fecha, el agente o agentes tóxicos causantes permanecen desconocidos. Se han realizado medidas de acidez, humedad, impurezas, fósforo, jabones y determinaciones espectrofotométricas de color a 409 nm. Puesto que las concentraciones de anilidas de los ácidos grasos en estos aceites se asocian al riesgo de padecer la enfermedad, se estudiaron la formación de compuestos derivados de anilina durante el tiempo de desnaturalización y con las temperaturas y tiempos de desodorización (temperaturas: 200ºC, 215ºC, 230ºC, 245ºC, 260ºC, y 270ºC y tiempos: 3, 4, 4.5, 5, 5.5 y 6 horas. La formación de anilidas de ácidos grasos aumenta con el tiempo de almacenamiento. La desodorización conlleva una reducción de la cantidad total de anilidas en todas las muestras, particularmente cuando la temperatura es superior a 245ºC. No fueron

  14. ESTIMATION OF WHEAT STRAW AND RAPESEED USEFULNESS FOR WHEAT FERTILISATION IN ARABLE FARMING

    Directory of Open Access Journals (Sweden)

    Sławomir Stankowski

    2015-02-01

    Full Text Available The aim of the research was the estimation of wheat and rapeseed straw usefulness for fertilising plants in arable farming. The subject matter of the study was the analysis of the influence of soil fertilisation with wheat and rapeseed straw on the yield and changes in the content of phosphorus, potassium, calcium and magnesium in winter wheat grain cultivars: Finezja and Ludwig. The static field experiment was conducted at Agricultural Experiment Station, Grabów, Institute of Soil Science and Plant Cultivation – State Research Institute (51°21′ N, 21°40′ E in the years 2008–2010 on Haplic Luvisol. The effect of fertilisation with wheat and rapeseed straw did not have a significant effect on grain yield of winter wheat cultivars ‘Finezja’ and ‘Ludwig’. The introduction of complementary nitrogen fertilisation caused an increase in grain yield of wheat cultivar Ludwig. Organic fertilisation with wheat and rapeseed straw as well as complementary nitrogen fertilisation did not significantly differentiate the content of phosphorus, potassium, calcium and magnesium in winter wheat grain cultivars ‘Finezja’ and ‘Ludwig’.

  15. Optimization of H2SO4-catalyzed hydrothermal pretreatment of rapeseed straw for bioconversion to ethanol

    DEFF Research Database (Denmark)

    Xuebin, Lu; Zhang, Y.; Angelidaki, Irini

    2009-01-01

    A central composite design of response surface method was used to optimize H2SO4-catalyzed hydrothermal pretreatment of rapeseed straw, in respect to acid concentration (0.5-2%), treatment time (5-20 min) and solid content (10-20%) at 180 degrees C. Enzymatic hydrolysis and fermentation were also...

  16. Methane production and digestion of different physical forms of rapeseed as fat supplements in dairy cows

    DEFF Research Database (Denmark)

    Brask, Maike; Lund, Peter; Weisbjerg, Martin Riis

    2013-01-01

    The purpose of this experiment was to study the effect of the physical form of rapeseed fat on methane (CH4) mitigation properties, feed digestion, and rumen fermentation. Four lactating ruminal-, duodenal-, and ileal-cannulated Danish Holstein dairy cows (143 d in milk, milk yield of 34.3 kg) we...

  17. Evaluation of rapeseed cultivation suitability in Apulia with GIS-multicriteria analysis

    Directory of Open Access Journals (Sweden)

    Nicola Grassano

    2011-05-01

    Full Text Available The potential of land for energy crops is determined by an evaluation of biophysical and economical variables. From this respect, climate, soil and geomorphologic environmental components are the most important agro-ecological variables to conduct this kind of evaluation. In this study, Geographic Information System (GIS has been used to identify the most suitable areas for rapeseed crop production in the Apulia region. Environmental components such as climate (precipitation, temperature, soil (chemical and physical characteristics including texture, gravel percentage, pH, electrical conductivity (EC, soil depth, etc., topography (slope and economical components (farm-useful surface, mechanization, percentage of land covered by cereals and horticulture, irrigated surface, set-aside surface were considered. Biophysical parameters (climate, geomorphology and soil were used to draw a map of agronomic suitability of rapeseed according to the Agronomic Classification of the Territory II (CAT II classification system; a map of general suitability of rapeseed in the Apulia region has been drawn with the support of multicriteria analysis, which also takes into account the economical parameters. The results from overlay maps for agronomic evaluation in the Apulia region showed that 38% (189,983 ha of the arable land area is highly suitable (S1, 43.4% (21,6642 ha is moderately suitable (S2, 11.9% (59,487 ha is marginally suitable (S3 and 6.7% (33,210 ha is and not suitable (N for rapeseed cultivation.

  18. Abatement of particulate matter emission from experimental aviary housings for laying hens by spraying rapeseed oil

    NARCIS (Netherlands)

    Winkel, A.; Riel, van J.W.; Emous, van R.A.; Aarnink, A.J.A.; Groot Koerkamp, P.W.G.; Ogink, N.W.M.

    2016-01-01

    In alternative systems for laying hens, concentrations and emission rates of particulate matter (PM) give reason for concern with regard to working conditions, bird health and productivity, and health of residents living near farms. Previously, we found that spraying a film of rapeseed oil onto the

  19. Monitoring lipase-catalyzed butterfat interesterification with rapesee oil by Fourier transform near-infrared spectroscopy

    DEFF Research Database (Denmark)

    Zhang, Hong; Mu, Huiling; Xu, Xuebing

    2006-01-01

    This work demonstrates the application of FT-NIR spectroscopy to monitor the enzymatic interesterification process for butterfat modification. The reactions were catalyzed by Lipozyme TL IM at 70 C for the blend of butterfat/rapeseed oil (70/30, w/w) in a packed-bed reactor. The blend and intere...

  20. Effects of Toasting Time on Digestive Hydrolysis of Soluble and Insoluble 00-Rapeseed Meal Proteins

    NARCIS (Netherlands)

    Salazar-Villanea, Sergio; Bruininx, Erik M.A.M.; Gruppen, Harry; Carré, Patrick; Quinsac, Alain; Poel, van der Thomas

    2017-01-01

    Thermal damage to proteins can reduce their nutritional value. The effects of toasting time on the kinetics of hydrolysis, the resulting molecular weight distribution of 00-rapeseed meal (RSM) and the soluble and insoluble protein fractions separated from the RSM were studied. Hydrolysis was

  1. The effect of mixing ratio on co-pyrolysis of lignite and rapeseed

    Energy Technology Data Exchange (ETDEWEB)

    Onay, O [Anadolu Univ., Eskisehir (Turkey). Porsuk Vocational School; Usta, C.; Kockar, O.M. [Anadolu Univ., Eskisehir (Turkey). Dept. of Chemical Engineering

    2007-07-01

    This study was conducted to determine the influence of lignite on the yield and chemical structure of bio-oil produced from rapeseed using a fast pyrolysis technique. The rapeseed and lignite mixtures were pyrolyzed in a fixed bed reactor. Heating rates and temperatures were controlled by a PID controller. Char yield after pyrolysis was determined from the overall weight losses of the reactor tube, while the liquid phase was collected in a glass liner. Experiments were conducted using a range of blending ratios. While final pyrolysis temperatures were set at 550 degrees C. An elemental analyzer was used to characterize the rapeseed and pyrolysis bio-oils. Fourier transform infrared analysis (FTIR) was used to conduct functional group compositional analyses. The study showed that conversion degree increased with temperature increases. Yields of both conversion and oil increased with biomass concentration. However, distribution between conversion and oil was influenced by the blending ratio. A maximum yield of oil was obtained with a 5 per cent blending ratio of lignite. It was concluded that the co-pyrolysis of rapeseed and coal at a temperature of 550 degrees C increases production by more than 11 per cent. 14 refs., 3 tabs., 3 figs.

  2. Life cycle water footprint analysis for rapeseed derived jet fuel in North Dakota

    Science.gov (United States)

    Rapeseed is a promising feedstock source for hydroprocessed esters and fatty acids (HEFA) jet fuel production to address energy security and climate change mitigation. However, concerns have been raised about its impact on water as large scale biofuels production may place pressure on fresh water su...

  3. 7 CFR 457.161 - Canola and rapeseed crop insurance provisions.

    Science.gov (United States)

    2010-01-01

    ...: Canola and Rapeseed Crop Provisions If a conflict exists among the policy provisions, the order of... that contains at least 30 percent of an industrial type of oil as shown on the Special Provisions and... Official United States Standards for Grain including, but not limited to protein and oil, will not be...

  4. Blends of rapeseed oil with black cumin and rice bran oils for increasing the oxidative stability.

    Science.gov (United States)

    Rudzińska, Magdalena; Hassanein, Minar M M; Abdel-Razek, Adel G; Ratusz, Katarzyna; Siger, Aleksander

    2016-02-01

    For the increase of oxidative stability and phytonutrient contents of rapeseed oil 5, 10 and 20 % blends with rice bran oil and black cumin oil were prepared. Profiles of different bioactive lipid components of blends including tocopherols, tocotrienols, phytosterols and phytostanols as well as fatty acid composition were carried out using HPLC and GLC. Rancimat was used for detecting oxidative stability of the fatty material. The blends with black cumin seed oil characterized higher level of α- and γ-tocopherols as well as all isomers of tocotrienols. Presence of rice bran oil in blends leads to increased tocotrienols amounts, β-sitosterol and squalene. Blending resulted in lowering ratio of PUFA/SFA and improves stability of these oils. The ratio of omega-6/omega-3 raises from 2.1 in rapeseed oil to 3.7 and 3.0 in blends with black cumin and rice bran oils, respectively. Addition of 10 and 20 % of black cumin and rice bran oils to rapeseed oil were influenced on the oxidative stability of prepared blends. The results appear that blending of rapeseed oil with black cumin seed oil or rice bran oil enhanced nutritional and functional properties via higher oxidative stability as well as improved phytonutrient contents.

  5. Ozone affects growth and development of Pieris brassicae on the wild host plant Brassica nigra.

    Science.gov (United States)

    Khaling, Eliezer; Papazian, Stefano; Poelman, Erik H; Holopainen, Jarmo K; Albrectsen, Benedicte R; Blande, James D

    2015-04-01

    When plants are exposed to ozone they exhibit changes in both primary and secondary metabolism, which may affect their interactions with herbivorous insects. Here we investigated the performance and preferences of the specialist herbivore Pieris brassicae on the wild plant Brassica nigra under elevated ozone conditions. The direct and indirect effects of ozone on the plant-herbivore system were studied. In both cases ozone exposure had a negative effect on P. brassicae development. However, in dual-choice tests larvae preferentially consumed plant material previously fumigated with the highest concentration tested, showing a lack of correlation between larval preference and performance on ozone exposed plants. Metabolomic analysis of leaf material subjected to combinations of ozone and herbivore-feeding, and focussing on known defence metabolites, indicated that P. brassicae behaviour and performance were associated with ozone-induced alterations to glucosinolate and phenolic pools. Copyright © 2015 Elsevier Ltd. All rights reserved.

  6. Xanthomonas campestris attenuates virulence by sensing light through a bacteriophytochrome photoreceptor.

    Science.gov (United States)

    Bonomi, Hernán R; Toum, Laila; Sycz, Gabriela; Sieira, Rodrigo; Toscani, Andrés M; Gudesblat, Gustavo E; Leskow, Federico C; Goldbaum, Fernando A; Vojnov, Adrián A; Malamud, Florencia

    2016-11-01

    Phytochromes constitute a major photoreceptor family found in plants, algae, fungi, and prokaryotes, including pathogens. Here, we report that Xanthomonas campestris pv. campestris (Xcc), the causal agent of black rot disease which affects cruciferous crops worldwide, codes for a functional bacteriophytochrome (XccBphP). XccBphP possesses an N-terminal PAS2-GAF-PHY photosensory domain triad and a C-terminal PAS9 domain as its output module. Our results show that illumination of Xcc, prior to plant infection, attenuates its virulence in an XccBphP-dependent manner. Moreover, in response to light, XccBphP downregulates xanthan exopolysaccharide production and biofilm formation, two known Xcc virulence factors. Furthermore, the XccbphP null mutant shows enhanced virulence, similar to that of dark-adapted Xcc cultures. Stomatal aperture regulation and callose deposition, both well-established plant defense mechanisms against bacterial pathogens, are overridden by the XccbphP strain. Additionally, an RNA-Seq analysis reveals that far-red light or XccBphP overexpression produces genomewide transcriptional changes, including the inhibition of several Xcc virulence systems. Our findings indicate that Xcc senses light through XccBphP, eliciting bacterial virulence attenuation via downregulation of bacterial virulence factors. The capacity of XccBphP to respond to light both in vitro and in vivo was abolished by a mutation on the conserved Cys13 residue. These results provide evidence for a novel bacteriophytochrome function affecting an infectious process. © 2016 The Authors.

  7. Expression of sweet pepper Hrap gene in banana enhances resistance to Xanthomonas campestris pv. musacearum.

    Science.gov (United States)

    Tripathi, Leena; Mwaka, Henry; Tripathi, Jaindra Nath; Tushemereirwe, Wilberforce Kateera

    2010-11-01

    Banana Xanthomonas wilt (BXW), caused by the bacterium Xanthomonas campestris pv. musacearum, is the most devastating disease of banana in the Great Lakes region of Africa. The pathogen's rapid spread has threatened the livelihood of millions of Africans who rely on banana fruit for food security and income. The disease is very destructive, infecting all banana varieties, including both East African Highland bananas and exotic types of banana. In the absence of natural host plant resistance among banana cultivars, the constitutive expression of the hypersensitivity response-assisting protein (Hrap) gene from sweet pepper (Capsicum annuum) was evaluated for its ability to confer resistance to BXW. Transgenic lines expressing the Hrap gene under the regulation of the constitutive CaMV35S promoter were generated using embryogenic cell suspensions of two banana cultivars: 'Sukali Ndiizi' and 'Mpologoma'. These lines were characterized by molecular analysis, and were challenged with Xanthomonas campestris pv. musacearum to analyse the efficacy of the Hrap gene against BXW. The majority of transgenic lines (six of eight) expressing Hrap did not show any symptoms of infection after artificial inoculation of potted plants in the screenhouse, whereas control nontransgenic plants showed severe symptoms resulting in complete wilting. This study demonstrates that the constitutive expression of the sweet pepper Hrap gene in banana results in enhanced resistance to BXW. We describe the development of transgenic banana varieties resistant to BXW, which will boost the arsenal available to fight this epidemic disease and save livelihoods in the Great Lakes region of East and Central Africa. © 2010 IITA/NARO. Molecular Plant Pathology © 2010 BSPP and Blackwell Publishing Ltd.

  8. Physiological and genetic analysis of CO2-induced breakdown of self-incompatibility in Brassica rapa.

    Science.gov (United States)

    Lao, Xintian; Suwabe, Keita; Niikura, Satoshi; Kakita, Mitsuru; Iwano, Megumi; Takayama, Seiji

    2014-03-01

    Self-incompatibility (SI) of the Brassicaceae family can be overcome by CO2 gas treatment. This method has been used for decades as an effective means to obtain a large amount of inbred seeds which can then be used for F1 hybrid seed production; however, the molecular mechanism by which CO2 alters the SI pathway has not been elucidated. In this study, to obtain new insights into the mechanism of CO2-induced SI breakdown, the focus was on two inbred lines of Brassica rapa (syn. campestris) with different CO2 sensitivity. Physiological examination using X-ray microanalysis suggested that SI breakdown in the CO2-sensitive line was accompanied by a significant accumulation of calcium at the pollen-stigma interface. Pre-treatment of pollen or pistil with CO2 gas before pollination showed no effect on the SI reaction, suggesting that some physiological process after pollination is necessary for SI to be overcome. Genetic analyses using F1 progeny of a CO2-sensitive × CO2-insensitive cross suggested that CO2 sensitivity is a semi-dominant trait in these lines. Analysis of F2 progeny suggested that CO2 sensitivity could be a quantitative trait, which is controlled by more than one gene. Quantitative trait locus (QTL) analyses identified two major loci, BrSIO1 and BrSIO2, which work additively in overcoming SI during CO2 treatment. No QTL was detected at the loci previously shown to affect SI stability, suggesting that CO2 sensitivity is determined by novel genes. The QTL data presented here should be useful for determining the responsible genes, and for the marker-assisted selection of desirable parental lines with stable but CO2-sensitive SI in F1 hybrid breeding.

  9. Combining Ability Analysis and Genetic-Effects Studies for Some Important Quality Characters in Brassica napus L.

    Directory of Open Access Journals (Sweden)

    Aamar Shehzad

    2015-10-01

    Full Text Available Combining ability analysis has an important position in rapeseed breeding. To evaluate genetic and combining ability effects, three Brassica napus L. testers “Punjab Sarson, Legend and Durre-NIFA” and five lines “Duncled, K-258, ZN-R-1, ZN-R-8, ZN-M-6” were crossed using line × tester design in Randomized Complete Block Design (RCBD with three replications. Mean sum of squares of the analysis of variances (ANOVA for genotypes was highly significant for all of the traits. Most of the lines and testers exhibited significant results of mean sum of squares for combining ability. Line ‘Duncled’ was proved good general combiner for oil (8.8, protein (3.7, erucic acid (33.0, oleic acid (13.0 and glucosinolate (-19.3 over other lines and tester ‘Durree-NIFA’ for protein (6.6, erucic acid (-23.4, and linolenic acid (-5.3 over other testers. Significant specific combining ability effects were also observed. The best hybrid combinations were Legend × ZN-R-1 for oil (9.6, Punjab Sarson × Duncled for minimum erucic acid (-14.0 and linolenic acid contents (-6.0, and Legend × ZN-M-6 for maximum protein (8.2 and minimum glucosinolate contents (-11.1. The maximum oil contents were observed in ‘Legend × ZN-R-1’ (52.4%. The cross ‘Punjab Sarson × Duncled’ expressed maximum values of protein (26.5% and oleic acid (62.5% while minimum for erucic acid (2.3%, linolenic acid (5.4% and glucosinolate contents (19.3µmol/g. This research discloses the significance of non-additive genetic effects for most of the studied traits except oil contents. These studies will also help to improve nutritional values of rapeseed crop by selecting noble crosses.

  10. A Novel Cytoplasmic Male Sterility in Brassica napus (inap CMS) with Carpelloid Stamens via Protoplast Fusion with Chinese Woad

    Science.gov (United States)

    Kang, Lei; Li, Pengfei; Wang, Aifan; Ge, Xianhong; Li, Zaiyun

    2017-01-01

    A novel cytoplasmic male sterility (CMS) in Brassica napus (inap CMS) was selected from the somatic hybrid with Isatis indigotica (Chinese woad) by recurrent backcrossing. The male sterility was caused by the conversion of tetradynamous stamens into carpelloid structures with stigmatoid tissues at their tips and ovule-like tissues in the margins, and the two shorter stamens into filaments without anthers. The feminized development of the stamens resulted in the complete lack of pollen grains, which was stable in different years and environments. The pistils of inap CMS displayed normal morphology and good seed-set after pollinated by B. napus. Histological sections showed that the developmental alteration of the stamens initiated at the stage of stamen primordium differentiation. AFLP analysis of the nuclear genomic composition with 23 pairs of selective primers detected no woad DNA bands in inap CMS. Twenty out of 25 mitochondrial genes originated from I. indigotica, except for cox2-2 which was the recombinant between cox2 from woad and cox2-2 from rapeseed. The novel cox2-2 was transcribed in flower buds of inap CMS weakly and comparatively with the fertile B. napus addition line Me harboring one particular woad chromosome. The restorers of other autoplasmic and alloplasmic CMS systems in rapeseed failed to restore the fertility of inap CMS and the screening of B. napus wide resources found no fertility restoration variety, showing its distinct origin and the related mechanism of sterility. The reasons for the mitochondrial rearrangements and the breeding of the restorer for the novel CMS system were discussed. PMID:28428799

  11. Effect of water deficit on water use efficiency of canola (Brassica napus L. cultivars in Mashhad condition

    Directory of Open Access Journals (Sweden)

    S.H. Mousavi

    2016-04-01

    Full Text Available Water deficit is a major factor influencing yield of canola (Brassica napus L. seed yield and oil content. A field experiment was conducted during 2010 growing season in the Agriculture Research Station of Torogh, Mashhad, Iran to evaluate responses of canola cultivars to limited water. Experimental design was RCBD pattern with three replications. Treatments were two irrigation regimes (based on irrigation after 120 mm evaporation on class A pan for stress treatments and 80 mm evaporation for non stress treatments and six rapeseed cultivars(hyola 401, Hyola 330, Parkland, Goldrush, BP18 and landrace. Results showed that water use efficiency was significantly affected by drought stress. Average of water use efficiency at all cultivars in stress treatments was 6.6 Kg per m3 water by 3412.3 m3 water used and 4.5 Kg per m3 water by 4612.3 m3 water used in non stress treatments. The highest and the lowest water use efficiency observed in Hyola 401 and Goldrush by 7.4 and 2.6 kilograms per m3 water in drought stress treatment, respectively. In addition to the ability of oil production by rapeseed cultivars under drought stress was affected and became less in drought stress. Hyola 401 had the highest oil content by 0.28 kg oil per m3 water in non stress and BP.18 had the lowest oil content 0.06 kg oil per m3 water in stress treatment. Results showed that water deficit can affect oil content significantly.

  12. Complete mitochondrial genome sequence of black mustard (Brassica nigra; BB) and comparison with Brassica oleracea (CC) and Brassica carinata (BBCC).

    Science.gov (United States)

    Yamagishi, Hiroshi; Tanaka, Yoshiyuki; Terachi, Toru

    2014-11-01

    Crop species of Brassica (Brassicaceae) consist of three monogenomic species and three amphidiploid species resulting from interspecific hybridizations among them. Until now, mitochondrial genome sequences were available for only five of these species. We sequenced the mitochondrial genome of the sixth species, Brassica nigra (nuclear genome constitution BB), and compared it with those of Brassica oleracea (CC) and Brassica carinata (BBCC). The genome was assembled into a 232 145 bp circular sequence that is slightly larger than that of B. oleracea (219 952 bp). The genome of B. nigra contained 33 protein-coding genes, 3 rRNA genes, and 17 tRNA genes. The cox2-2 gene present in B. oleracea was absent in B. nigra. Although the nucleotide sequences of 52 genes were identical between B. nigra and B. carinata, the second exon of rps3 showed differences including an insertion/deletion (indel) and nucleotide substitutions. A PCR test to detect the indel revealed intraspecific variation in rps3, and in one line of B. nigra it amplified a DNA fragment of the size expected for B. carinata. In addition, the B. carinata lines tested here produced DNA fragments of the size expected for B. nigra. The results indicate that at least two mitotypes of B. nigra were present in the maternal parents of B. carinata.

  13. Brassica villosa, a system for studying non-glandular trichomes and genes in the Brassicas.

    Science.gov (United States)

    Nayidu, Naghabushana K; Tan, Yifang; Taheri, Ali; Li, Xiang; Bjorndahl, Trent C; Nowak, Jacek; Wishart, David S; Hegedus, Dwayne; Gruber, Margaret Y

    2014-07-01

    Brassica villosa is a wild Brassica C genome species with very dense trichome coverage and strong resistance to many insect pests of Brassica oilseeds and vegetables. Transcriptome analysis of hairy B. villosa leaves indicated higher expression of several important trichome initiation genes compared with glabrous B. napus leaves and consistent with the Arabidopsis model of trichome development. However, transcripts of the TRY inhibitory gene in hairy B. villosa were surprisingly high relative to B. napus and relative transcript levels of SAD2, EGL3, and several XIX genes were low, suggesting potential ancillary or less important trichome-related roles for these genes in Brassica species compared with Arabidopsis. Several antioxidant, calcium, non-calcium metal and secondary metabolite genes also showed differential expression between these two species. These coincided with accumulation of two alkaloid-like compounds, high levels of calcium, and other metals in B. villosa trichomes that are correlated with the known tolerance of B. villosa to high salt and the calcium-rich natural habitat of this wild species. This first time report on the isolation of large amounts of pure B. villosa trichomes, on trichome content, and on relative gene expression differences in an exceptionally hairy Brassica species compared with a glabrous species opens doors for the scientific community to understand trichome gene function in the Brassicas and highlights the potential of B. villosa as a trichome research platform.

  14. The Effect of Field Dodder (Cuscuta campestris Yunck. on Morphological and Fluorescence Parameters of Giant Ragweed (Ambrosia trifida L.

    Directory of Open Access Journals (Sweden)

    Sava Vrbničanin

    2013-01-01

    Full Text Available The effect of the parasitic flowering plant known as field dodder (Cuscuta campestrisYunck. on morphological and fluorescence parameters of infested giant ragweed(Ambrosia trifida L. plants was examined under controlled conditions. The parameters ofchlorophyll fluorescence (Fo, Fv/Fm, ΦPSII, Fv, Fm, ETR and IF were measured on infested (Iand non-infested (N A. trifida plants over a period of seven days, beginning with the day ofinfestation. Morphological parameters (plant height, dry and fresh weight were measuredon the last day of fluorescence measurements. C. campestris was found to affect the height,fresh and dry weight of the infested A. trifida plants, causing significant reduction in plantheight and dry weight. Field dodder also affected several parameters of chlorophyll fluorescence(Fo, Fv/Fm, ΦPSII and Fv in infested A. trifida plants.

  15. Unleashing the Genome of Brassica Rapa

    Science.gov (United States)

    Tang, Haibao; Lyons, Eric

    2012-01-01

    The completion and release of the Brassica rapa genome is of great benefit to researchers of the Brassicas, Arabidopsis, and genome evolution. While its lineage is closely related to the model organism Arabidopsis thaliana, the Brassicas experienced a whole genome triplication subsequent to their divergence. This event contemporaneously created three copies of its ancestral genome, which had diploidized through the process of homeologous gene loss known as fractionation. By the fractionation of homeologous gene content and genetic regulatory binding sites, Brassica’s genome is well placed to use comparative genomic techniques to identify syntenic regions, homeologous gene duplications, and putative regulatory sequences. Here, we use the comparative genomics platform CoGe to perform several different genomic analyses with which to study structural changes of its genome and dynamics of various genetic elements. Starting with whole genome comparisons, the Brassica paleohexaploidy is characterized, syntenic regions with A. thaliana are identified, and the TOC1 gene in the circadian rhythm pathway from A. thaliana is used to find duplicated orthologs in B. rapa. These TOC1 genes are further analyzed to identify conserved non-coding sequences that contain cis-acting regulatory elements and promoter sequences previously implicated in circadian rhythmicity. Each “cookbook style” analysis includes a step-by-step walk-through with links to CoGe to quickly reproduce each step of the analytical process. PMID:22866056

  16. Anaerobic metabolism in Brassica seedlings

    Science.gov (United States)

    Park, Myoung-Ryoul; Hasenstein, Karl H.

    Germination typically depends on oxidative respiration. The lack of convection under space conditions may create hypoxic or conditions during seed germination. We investigated the effect of reduced oxygen on seed germination and metabolism to understand how metabolic constraints affect seed growth and responsiveness to reorientation. Germination was completely inhibited when seeds were imbibed in the absence of oxygen; germination occurred at 5% oxygen and higher levels. Adding oxygen after 72 h resulted in immediate germination (protrusion of the radicle). Hypoxia typically activates alcohol dehydrogenase (ADH, EC 1.1.1.1) and lactate dehydrogenase (LDH, EC 1.1.1.27) which produce ethanol and/or L-lactate, respectively. We report on the expression of ADH1 and LDH1, and changes in total soluble sugars, starch, pH, and L-lactate in seedlings grown at 28°C in 0, 2.5, 5, 10% and ambient (21%) oxygen conditions as controls. The highest consumption (lowest level) of sugars was seen at 0% oxygen but the lowest level of starch occurred 24 h after imbibition under ambient condition. Expression levels of ADH1 in ambient oxygen condition increased within 24 h but increased threefold under hypoxic conditions; LDH1 increased up to 8-fold under hypoxia compared to controls but ADH1 and LDH1 were less expressed as the oxygen levels increased. The intracellular pH of seeds decreased as the content of L-lactate increased for all oxygen concentrations. These results indicate that germination of Brassica is sensitive to oxygen levels and that oxygen availability during germination is an important factor for metabolic activities. (Supported by NASA grant NNX10AP91G)

  17. Ultrasound-assisted production of biodiesel FAME from rapeseed oil in a novel two-compartment reactor

    DEFF Research Database (Denmark)

    Nakayama, Ryo-ichi; Imai, Masanao; Woodley, John

    2017-01-01

    Ultrasonication has been proposed as a promising technique for enzymatic transesterification. In contrast, excess ultrasonication causes an enzyme inactivation. This paper presents enzymatic transesterification to produce fatty acid methyl ester (FAME) from rapeseed oil using Callera Trans L™ using...

  18. Antioxidant Enzyme Activities of some Brassica Species

    Directory of Open Access Journals (Sweden)

    Rodica SOARE

    2017-11-01

    Full Text Available This paper set out to comparatively study five species: white cabbage (Brassica oleracea L. var. capitata alba Alef., red cabbage (Brassica oleracea L. var. capitata f. rubra Alef., Kale (Brassica oleracea L. var. Acephala, cauliflower (Brassica oleracea var. botrytis and broccoli (Brassica oleracea var. cymosa in order to identify those with high enzymatic and antioxidant activities. The enzymatic activity of superoxide dismutase (SOD, catalase (CAT and soluble peroxidase (POX as well as the antioxidant activity against 2.2’-azino-bis (3-ethylbenzothiazoline-6-sulphonic acid (ABTS radical cation were determined. Total superoxide dismutase activity was measured spectrophotometrically based on inhibition in the photochemical reduction of nitroblue tetrazolium. Total soluble peroxidase was assayed by measuring the increase in A436 due to the guaiacol oxidation and the catalase activity was assayed through the colorimetric method. The capacity of extracts to scavenge the ABTS radical cation was assessed colorimetric using Trolox as a standard. The obtained results show that studied enzymatic activities and the antioxidant activity against ABTS vary depending on the analyzed species. So, among the studied Brassicaceae species, it emphasize red cabbage with the highest enzymatic activity (CAT 22.54 mM H2O2/min/g and POX 187.2 mM ΔA/1min/1g f.w. and kale with highest antioxidant activity, of 767 μmol TE/100g f.w. The results of this study recommendintroducing the studied varieties in diet due to the rich antioxidant properties.

  19. Micronutrients-fortified rapeseed oil improves hepatic lipid accumulation and oxidative stress in rats fed a high-fat diet

    OpenAIRE

    Xu, Jiqu; Zhou, Xiaoqi; Gao, Hui; Chen, Chang; Deng, Qianchun; Huang, Qingde; Ma, Jing; Wan, Zhengyang; Yang, Jin?e; Huang, Fenghong

    2013-01-01

    Intake of high-fat diet is associated with increased fatty livers. Hepatic lipid accumulation and oxidative stress are key pathophysiological mechanisms in this disease. Micronutrients polyphenols, tocopherols and phytosterols in rapeseed exert potential benefit to hepatoprotection, but most of these micronutrients are removed by the traditional refining process. The purpose of the present study was to determine whether rapeseed oil fortified with these micronutrients can decrease hepatic lip...

  20. Sinapinic and protocatechuic acids found in rapeseed: isolation, characterisation and potential benefits for human health as functional food ingredients

    Directory of Open Access Journals (Sweden)

    Quinn Leah

    2017-12-01

    Full Text Available Rapeseed is one of the world’s major oilseeds, and rapeseed oil is produced by pressing of the seeds. This process results in the production of a low-economic-value by-product, rapeseed meal, which is commonly used as animal feed. Rapeseed meal is rich in bioactive phenolic compounds, including sinapinic acid (SA and protocatechuic acid (PCA. Isolation of these bioactive compounds from a by-product of rapeseed oil production is largely in agreement with the current concept of the circular economy and total utilisation of crop harvest using a biorefinery approach. In this review, current information concerning traditional and novel methods to isolate phenolic compounds – including SA and PCA – from rapeseed meal, along with in vitro and in vivo studies concerning the bioactivity of SA and PCA and their associated health effects, is collated. These health effects include anti-inflammatory, anti-cancer, anti-diabetes activities, along with histone deacetylase inhibition and protective cardiovascular, neurological and hepatic effects. The traditional extraction methods include use of solvents and/or enzymes. However, a need for simpler, more efficient methodologies has led to the development of novel extraction processes, including microwave-assisted, ultrasound-assisted, pulsed electric field and high-voltage electrical discharge extraction processes.

  1. Solid-state fermentation of rapeseed meal with the white-rot fungi trametes versicolor and Pleurotus ostreatus.

    Science.gov (United States)

    Żuchowski, Jerzy; Pecio, Łukasz; Jaszek, Magdalena; Stochmal, Anna

    2013-12-01

    Rapeseed meal is valuable high-protein forage, but its nutritional value is significantly reduced by the presence of a number of antinutrients, including phenolic compounds. Solid-state fermentation with white-rot fungi was used to decrease the sinapic acid concentration of rapeseed meal. After 7 days of growth of Trametes versicolor and Pleurotus ostreatus, the sinapic acid content of rapeseed meal was reduced by 59.9 and 74.5 %, respectively. At the end of the experiment, sinapic acid concentration of T. versicolor cultures decreased by 93%of the initial value; in the case of cultures of P. ostreatus, 93.2 % reduction was observed. Moreover, cultivation of white-rot fungi on rapeseed meal resulted in the intensive production of extracellular laccase, particularly strong during the late phases of growth of T. versicolor. The obtained results confirm that both fungal species may effectively be used to decompose antinutritional phenolics of rapeseed meal. Rapeseed meal may also find use as an inexpensive and efficient substrate for a biotechnological production of laccase by white-rot fungi.

  2. Effects of low light on photosynthetic properties, antioxidant enzyme activity, and anthocyanin accumulation in purple pak-choi (Brassica campestris ssp. Chinensis Makino)

    National Research Council Canada - National Science Library

    Hongfang Zhu; Xiaofeng Li; Wen Zhai; Yang Liu; Qianqian Gao; Jinping Liu; Li Ren; Huoying Chen; Yuying Zhu

    2017-01-01

    Anthocyanins are secondary metabolites that contribute to red, blue, and purple colors in plants and are affected by light, but the effects of low light on the physiological responses of purple pak...

  3. Development of EST-SSR markers in flowering Chinese cabbage (Brassica campestris L. ssp. chinensis var. utilis Tsen et Lee) based on de novo transcriptomeic assemblies

    Science.gov (United States)

    Flowering Chinese cabbage is one of the most important vegetable crops in southern China. Genetic improvement of various agronomic traits in this crop is underway to meet high market demand in the region, but the progress is hampered by limited number of molecular markers available in this crop. Thi...

  4. Development of EST-SSR markers in flowering Chinese cabbage (Brassica campestris L. ssp. chinensis var. utilis Tsen et Lee based on de novo transcriptomic assemblies.

    Directory of Open Access Journals (Sweden)

    Jingfang Chen

    Full Text Available Flowering Chinese cabbage is one of the most important vegetable crops in southern China. Genetic improvement of various agronomic traits in this crop is underway to meet high market demand in the region, but the progress is hampered by limited number of molecular markers available in this crop. This study aimed to develop EST-SSR markers from transcriptome sequences generated by next-generation sequencing. RNA-seq of eight cabbage samples identified 48,975 unigenes. Of these unigenes, 23,267 were annotated in 56 gene ontology (GO categories, 6,033 were mapped to 131 KEGG pathways, and 7,825 were assigned to clusters of orthologous groups (COGs. From the unigenes, 8,165 EST-SSR loci were identified and 98.57% of them were 1-3 nucleotide repeats with 14.32%, 41.08% and 43.17% of mono-, di- and tri-nucleotide repeats, respectively. Fifty-eight types of motifs were identified with A/T, AG/CT, AT/AT, AC/GT, AAG/CTT and AGG/CCT the most abundant. The lengths of repeated nucleotide sequences in all SSR loci ranged from 12 to 60 bp, with most (88.51% under 20 bp. Among 170 primer pairs were randomly selected from a total of 4,912 SSR primers we designed, 48 yielded unambiguously polymorphic bands with high reproducibility. Cluster analysis using 48 SSRs classified 34 flowering Chinese cabbage cultivars into three groups. A large number of EST-SSR markers identified in this study will facilitate marker-assisted selection in the breeding programs of flowering Chinese cabbage.

  5. Quantitative trait loci for thermal time to flowering and photoperiod responsiveness discovered in summer annual-type Brassica napus L.

    Directory of Open Access Journals (Sweden)

    Matthew N Nelson

    Full Text Available Time of flowering is a key adaptive trait in plants and is conditioned by the interaction of genes and environmental cues including length of photoperiod, ambient temperature and vernalisation. Here we investigated the photoperiod responsiveness of summer annual-types of Brassica napus (rapeseed, canola. A population of 131 doubled haploid lines derived from a cross between European and Australian parents was evaluated for days to flowering, thermal time to flowering (measured in degree-days and the number of leaf nodes at flowering in a compact and efficient glasshouse-based experiment with replicated short and long day treatments. All three traits were under strong genetic control with heritability estimates ranging from 0.85-0.93. There was a very strong photoperiod effect with flowering in the population accelerated by 765 degree-days in the long day versus short day treatments. However, there was a strong genetic correlation of line effects (0.91 between the long and short day treatments and relatively low genotype x treatment interaction indicating that photoperiod had a similar effect across the population. Bivariate analysis of thermal time to flowering in short and long days revealed three main effect quantitative trait loci (QTLs that accounted for 57.7% of the variation in the population and no significant interaction QTLs. These results provided insight into the contrasting adaptations of Australian and European varieties. Both parents responded to photoperiod and their alleles shifted the population to earlier flowering under long days. In addition, segregation of QTLs in the population caused wide transgressive segregation in thermal time to flowering. Potential candidate flowering time homologues located near QTLs were identified with the aid of the Brassica rapa reference genome sequence. We discuss how these results will help to guide the breeding of summer annual types of B. napus adapted to new and changing environments.

  6. High-density single nucleotide polymorphism (SNP) array mapping in Brassica oleracea: identification of QTL associated with carotenoid variation in broccoli florets.

    Science.gov (United States)

    Brown, Allan F; Yousef, Gad G; Chebrolu, Kranthi K; Byrd, Robert W; Everhart, Koyt W; Thomas, Aswathy; Reid, Robert W; Parkin, Isobel A P; Sharpe, Andrew G; Oliver, Rebekah; Guzman, Ivette; Jackson, Eric W

    2014-09-01

    A high-resolution genetic linkage map of B. oleracea was developed from a B. napus SNP array. The work will facilitate genetic and evolutionary studies in Brassicaceae. A broccoli population, VI-158 × BNC, consisting of 150 F2:3 families was used to create a saturated Brassica oleracea (diploid: CC) linkage map using a recently developed rapeseed (Brassica napus) (tetraploid: AACC) Illumina Infinium single nucleotide polymorphism (SNP) array. The map consisted of 547 non-redundant SNP markers spanning 948.1 cM across nine chromosomes with an average interval size of 1.7 cM. As the SNPs are anchored to the genomic reference sequence of the rapid cycling B. oleracea TO1000, we were able to estimate that the map provides 96 % coverage of the diploid genome. Carotenoid analysis of 2 years data identified 3 QTLs on two chromosomes that are associated with up to half of the phenotypic variation associated with the accumulation of total or individual compounds. By searching the genome sequences of the two related diploid species (B. oleracea and B. rapa), we further identified putative carotenoid candidate genes in the region of these QTLs. This is the first description of the use of a B. napus SNP array to rapidly construct high-density genetic linkage maps of one of the constituent diploid species. The unambiguous nature of these markers with regard to genomic sequences provides evidence to the nature of genes underlying the QTL, and demonstrates the value and impact this resource will have on Brassica research.

  7. A new time-saving transformation system for Brassica napus

    African Journals Online (AJOL)

    STORAGESEVER

    2009-06-03

    mediated transformation system for Brassica napus was developed. A series of combinations of optical densities, infection durations, concentrations of acetosyringone and silwet L77 were evaluated. Maximum transformation.

  8. Evolution of Enzymatic Activities in the Enolase Superfamily: L-Fuconate Dehydratase from Xanthomonas campestris

    Energy Technology Data Exchange (ETDEWEB)

    Yew,W.; Fedorov, A.; Fedorov, E.; Rakus, J.; Pierce, R.; Almo, S.; Gerlt, J.

    2006-01-01

    Many members of the mechanistically diverse enolase superfamily have unknown functions. In this report the authors use both genome (operon) context and screening of a library of acid sugars to assign the L-fuconate dehydratase (FucD) function to a member of the mandelate racemase (MR) subgroup of the superfamily encoded by the Xanthomonas campestris pv. campestris str. ATCC 33913 genome (GI: 21233491). Orthologues of FucD are found in both bacteria and eukaryotes, the latter including the rTS beta protein in Homo sapiens that has been implicated in regulating thymidylate synthase activity. As suggested by sequence alignments and confirmed by high-resolution structures in the presence of active site ligands, FucD and MR share the same active site motif of functional groups: three carboxylate ligands for the essential Mg2+ located at the ends of th third, fourth, and fifth-strands in the (/)7-barrel domain (Asp 248, Glu 274, and Glu 301, respectively), a Lys-x-Lys motif at the end of the second-strand (Lys 218 and Lys 220), a His-Asp dyad at the end of the seventh and sixth-strands (His 351 and Asp 324, respectively), and a Glue at the end of the eighth-strand (Glu 382). The mechanism of the FucD reaction involves initial abstraction of the 2-proton by Lys 220, acid catalysis of the vinylogous-elimination of the 3-OH group by His 351, and stereospecific ketonization of the resulting 2-keto-3-deoxy-L-fuconate product. Screening of the library of acid sugars revealed substrate and functional promiscuity: In addition to L-fuconate, FucD also catalyzes the dehydration of L-galactonate, D-arabinonate, D-altronate, L-talonate, and D-ribonate. The dehydrations of L-fuconate, L-galactonate, and D-arabinonate are initiated by abstraction of the 2-protons by Lys 220. The dehydrations of L-talonate and D-ribonate are initiated by abstraction of the 2-protons by His 351; however, protonation of the enediolate intermediates by the conjugate acid of Lys 220 yields L

  9. Complete genome sequence of the rapeseed plant-growth promoting Serratia plymuthica strain AS9

    Energy Technology Data Exchange (ETDEWEB)

    Neupane, Saraswoti [Uppsala University, Uppsala, Sweden; Hogberg, Nils [Uppsala University, Uppsala, Sweden; Alstrom, Sadhna [Uppsala University, Uppsala, Sweden; Lucas, Susan [U.S. Department of Energy, Joint Genome Institute; Han, James [U.S. Department of Energy, Joint Genome Institute; Lapidus, Alla L. [U.S. Department of Energy, Joint Genome Institute; Cheng, Jan-Fang [U.S. Department of Energy, Joint Genome Institute; Bruce, David [Los Alamos National Laboratory (LANL); Goodwin, Lynne A. [Los Alamos National Laboratory (LANL); Pitluck, Sam [U.S. Department of Energy, Joint Genome Institute; Peters, Lin [U.S. Department of Energy, Joint Genome Institute; Ovchinnikova, Galina [U.S. Department of Energy, Joint Genome Institute; Lu, Megan [Los Alamos National Laboratory (LANL); Han, Cliff [Los Alamos National Laboratory (LANL); Detter, J. Chris [U.S. Department of Energy, Joint Genome Institute; Tapia, Roxanne [Los Alamos National Laboratory (LANL); Fiebig, Anne [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany; Land, Miriam L [ORNL; Hauser, Loren John [ORNL; Kyrpides, Nikos C [U.S. Department of Energy, Joint Genome Institute; Ivanova, N [U.S. Department of Energy, Joint Genome Institute; Pagani, Ioanna [U.S. Department of Energy, Joint Genome Institute; Klenk, Hans-Peter [DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany; Woyke, Tanja [U.S. Department of Energy, Joint Genome Institute; Finlay, Roger D. [Uppsala University, Uppsala, Sweden

    2012-01-01

    Serratia plymuthica are plant-associated, plant beneficial species belonging to the family Enterobacteriaceae. The members of the genus Serratia are ubiquitous in nature and their life style varies from endophytic to free-living. S. plymuthica AS9 is of special interest for its ability to inhibit fungal pathogens of rapeseed and to promote plant growth. The genome of S. plymuthica AS9 comprises a 5,442,880 bp long circular chromosome that consists of 4,952 protein-coding genes, 87 tRNA genes and 7 rRNA operons. This genome is part of the project entitled Genomics of four rapeseed plant growth promoting bacteria with antagonistic effect on plant pathogens awarded through the 2010 DOE-JGI Community Sequencing Program (CSP2010).

  10. Impact of rapeseed press-cake on Maillard reaction in a cookie model system.

    Science.gov (United States)

    Troise, Antonio Dario; Wilkin, Jonathan Desmond; Fiore, Alberto

    2018-03-15

    Rapeseed press-cake (RPC) is a byproduct of rapeseed oil production, rich in proteins and fiber. The aim of this study was to investigate the impact of cold pressed RPC, RPC fiber isolate and RPC alkaline extract on the formation of acrylamide and 5-hydroxymethylfufural (HMF) in cookies. Both compounds were influenced by the ingredients: the addition of RPC led to a significant dose-dependent increase of HMF in the cookies and to an increase of acrylamide up to 66.9%. On the contrary, acrylamide concentration was reduced down to 39.6% in presence of the alkaline extract and down to 4.4% in the presence of the fiber extract. The Michael addition of free amino acids to acrylamide was further investigated by high-resolution mass spectrometry (HRMS) revealing that cysteine was the preferred nucleophile for acrylamide elimination. Copyright © 2017 Elsevier Ltd. All rights reserved.

  11. Rapeseed and sunflower meal: a review on biotechnology status and challenges.

    Science.gov (United States)

    Lomascolo, Anne; Uzan-Boukhris, Eva; Sigoillot, Jean-Claude; Fine, Frédéric

    2012-09-01

    Rapeseed and sunflower are two of the world's major oilseeds. Rapeseed and sunflower meal (RSM and SFM), the by-products of oil extraction, are produced in large quantities. They are mainly composed of proteins, lignocellulosic fibres and minerals. They were initially used as a protein complement in animal feed rations and sometimes as fertilizer or as combustible source. More recently, new alternatives to these traditional uses have been developed that draw on the structure and physicochemical properties of RSM and SFM, which are plentiful sources of nitrogen and carbon nutrients. This feature, together with their cheapness and ready availability, supports the cultivation of various microorganisms in both submerged cultures and solid-state fermentation. Recent studies have thus emphasized the potential utilisation of RSM and SFM in fermentative processes, including saccharification and production of enzymes, antibiotics, antioxidants and other bio-products, opening new challenging perspectives in white biotechnology applications.

  12. Legume seeds and rapeseed press cake as substitutes for soybean meal in sow and piglet feed

    Directory of Open Access Journals (Sweden)

    Ewa Hanczakowska

    2013-11-01

    Full Text Available The possibility of replacing soybean meal with mixtures of rapeseed press cake (RPC and legume seeds in sow and piglet diets was evaluated in an experiment on 30 sows and their progeny. Group I (control received standard feed mixture containing soybean meal as the main protein source, group II – RPC mixed with fodder pea, group III – field bean, group IV – blue lupine, group V – yellow lupine. Weaned piglets received mixtures containing RPC and legume mixtures. Considerable differences were found in amino acid composition of proteins. Differences in the apparent digestibility of essential nutrients were statistically insignificant. Sows fed with field bean and yellow lupine gave birth to heaviest piglets. After weaning piglets receiving field bean were characterized by the best weight gains. It is concluded that mixing rapeseed cake with legume seeds allows for the complete replacement of soybean meal in sow diets and for partial replacement in piglet diets.

  13. COMPARATIVE MOLECULAR GENETIC ANALYSIS BETWEEN UKRAINIAN AND EU REGISTERED GLYPHOSATE-TOLERANT RAPESEED TRANSGENIC PLANTS

    Directory of Open Access Journals (Sweden)

    A. M. Taranenko

    2015-04-01

    Full Text Available The purpose of research was to analyze 10 developed at the Institute of Cell Biology and Genetic Engineering lines of rapeseed to confirm the presence and functionality of the transferred transgene CP4 epsps, as well as the differences among those lines from registered transformation events GT73 and GT200 (Monsanto. During the study extraction of total rapeseed DNA, PCR analysis, electrophoretic separation and visualization of amplicons in agarose gel were conducted, as well as testing of green plants for resistance to glyphosate in greenhouse. The structural difference among 7 transgenic lines from registered transformation events GT73 and GT200 was revealed. Plants showing the presence of synthetic CP4 epsps sequence were resistant to the herbicide in a closed soil. The uniqueness of the obtained transformation events was confirmed, as well as the prospect of using them in breeding.

  14. Genetic mapping and functional analysis of the tomato Bs4 locus governing recognition of the Xanthomonas campestris pv. vesicatoria AvrBs4 protein.

    Science.gov (United States)

    Ballvora, A; Pierre, M; van den Ackerveken, G; Schornack, S; Rossier, O; Ganal, M; Lahaye, T; Bonas, U

    2001-05-01

    Xanthomonas campestris pv. vesicatoria is the causal agent of bacterial spot disease on pepper (Capsicum spp.) and tomato (Lycopersicon spp.). Analysis of 17 different Lycopersicon accessions with avrBs4-expressing X. campestris pv. vesicatoria strains identified 15 resistant and two susceptible tomato genotypes. Genetic analysis revealed that AvrBs4 recognition in tomato is governed by a single locus, designated Bs4 (bacterial spot resistance locus no. 4). Amplified fragment length polymorphism and bulked DNA templates from resistant and susceptible plants were used to define a 2.6-cM interval containing the Bs4 locus. A standard tomato mapping population was employed to localize Bs4-linked markers on the short arm of chromosome 5. Investigation of X. campestris pv. vesicatoria hrp mutant strains revealed that AvrBs4 secretion and avirulence activity are hrp dependent. Agrobacterium-based delivery of the avrBs4 gene into tomato triggered a plant response that phenotypically resembled the hypersensitive response induced by avrBs4-expressing X. campestris pv. vesicatoria strains, suggesting symplastic perception of the avirulence protein. Mutations in the avrBs4 C-terminal nuclear localization signals (NLSs) showed that NLSs are dispensable for Bs4-mediated recognition. Our data suggest that tomato Bs4 and pepper Bs3 employ different recognition modes for detection of the highly homologous X. campestris pv. vesicatoria avirulence proteins AvrBs4 and AvrBs3.

  15. Influence of metal loading on hydrocracking of rapeseed oil using bifunctional micro-/mesoporous composite materials

    Energy Technology Data Exchange (ETDEWEB)

    Gille, T.; Busse, O.; Reschetilowski, W. [Technische Univ. Dresden (Germany). Inst. of Industrial Chemistry

    2013-11-01

    Hydrocracking of rapeseed oil has been investigated in a fixed bed reactor under integral conditions. A synthesized micro-/mesoporous composite material Al-MCM-41/ZSM-5 modified by different metal loadings (NiMo, PtNiMo, Pt) was used as catalyst system. It could be demonstrated that the support material and their metal loading influence the product selectivity as well as the deactivation tendencies of the catalyst sample. (orig.)

  16. Effects of Toasting Time on Digestive Hydrolysis of Soluble and Insoluble 00-Rapeseed Meal Proteins

    OpenAIRE

    Salazar-Villanea, Sergio; Bruininx, Erik M.A.M.; Gruppen, Harry; Carré, Patrick; Quinsac, Alain; Poel, de, K.R.

    2017-01-01

    Thermal damage to proteins can reduce their nutritional value. The effects of toasting time on the kinetics of hydrolysis, the resulting molecular weight distribution of 00-rapeseed meal (RSM) and the soluble and insoluble protein fractions separated from the RSM were studied. Hydrolysis was performed with pancreatic proteases to represent in vitro protein digestibility. Increasing the toasting time of RSM linearly decreased the rate of protein hydrolysis of RSM and the insoluble protein frac...

  17. Fatty acids, vitamins and cholesterol content, and sensory properties of cheese made with milk from sheep fed rapeseed oilcake.

    Science.gov (United States)

    Nájera, A I; Bustamante, M A; Albisu, M; Valdivielso, I; Amores, G; Mandaluniz, N; Arranz, J; Barron, L J R; de Renobales, M

    2017-09-01

    The aim of the present study was to evaluate the influence of rapeseed oilcake used for feeding sheep on the content of fatty acids (FA), tocopherols, retinoids, and cholesterol of milk and cheese, and on the sensory properties of cheese. Indoor animal feeding (in winter) is the highest cost of production for cheesemakers, and the inclusion of locally produced rapeseed oilcake in the concentrate feed formulation can reduce the cost of cheese production, as long as the quality of the cheese is not altered. The experiment was carried out in March (mid lactation) with 72 Latxa sheep from an experimental farm located in the Basque Country (northern Spain). Two homogeneous groups of animals (n = 36) were set to receive each a different diet based on commercial or rapeseed concentrate, respectively, and forage (Festuca hay). Animal production parameters were individually recorded for each feeding group, whereas bulk milk from each group was used for cheesemaking trials. The rapeseed concentrate had higher amounts of unsaturated FA (mainly C18:1 cis isomers, C18:2 cis-9,cis-12 and C18:3 cis-9,cis-12,cis-15) and tocopherols than the commercial concentrate. The inclusion of rapeseed oilcake in the diet of dairy sheep did not compromise animal production parameters or milk gross composition. Bulk milk and cheese from sheep fed rapeseed concentrate showed higher content of unsaturated FA and tocopherols than those from sheep fed commercial concentrate. No differences were observed in the content of retinoid in milk and cheese between feeding groups, whereas the cholesterol content was slightly lower in cheese made with milk from sheep fed rapeseed concentrate. Thus, milk and cheese from sheep fed rapeseed concentrate had a healthier lipid profile. In addition, the inclusion of rapeseed oilcake in the diet of sheep did not change the typical sensory attributes of Protected Denomination of Origin Idiazabal cheese. Therefore, rapeseed concentrate could be a good local resource

  18. Structural and functional comparative mapping between the Brassica A genomes in allotetraploid Brassica napus and diploid Brassica rapa.

    Science.gov (United States)

    Jiang, Congcong; Ramchiary, Nirala; Ma, Yongbiao; Jin, Mina; Feng, Ji; Li, Ruiyuan; Wang, Hao; Long, Yan; Choi, Su Ryun; Zhang, Chunyu; Cowling, Wallace A; Park, Beom Seok; Lim, Yong Pyo; Meng, Jinling

    2011-10-01

    Brassica napus (AACC genome) is an important oilseed crop that was formed by the fusion of the diploids B. rapa (AA) and B. oleracea (CC). The complete genomic sequence of the Brassica A genome will be available soon from the B. rapa genome sequencing project, but it is not clear how informative the A genome sequence in B. rapa (A(r)) will be for predicting the structure and function of the A subgenome in the allotetraploid Brassica species B. napus (A(n)). In this paper, we report the results of structural and functional comparative mapping between the A subgenomes of B. napus and B. rapa based on genetic maps that were anchored with bacterial artificial chromosomes (BACs)-sequence of B. rapa. We identified segmental conservation that represented by syntenic blocks in over one third of the A genome; meanwhile, comparative mapping of quantitative trait loci for seed quality traits identified a dozen homologous regions with conserved function in the A genome of the two species. However, several genomic rearrangement events, such as inversions, intra- and inter-chromosomal translocations, were also observed, covering totally at least 5% of the A genome, between allotetraploid B. napus and diploid B. rapa. Based on these results, the A genomes of B. rapa and B. napus are mostly functionally conserved, but caution will be necessary in applying the full sequence data from B. rapa to the B. napus as a result of genomic rearrangements in the A genome between the two species.

  19. Fluidized bed treatment of rapeseed meal and cake as possibility for the production of canolol

    Directory of Open Access Journals (Sweden)

    Pudel Frank

    2014-01-01

    Full Text Available Canolol (2,6-dimethoxy-4-vinylphenol, 4-vinylsyringol, which is formed by thermally initiated CO2splitting off from sinapic acid, possesses a high antioxidant potential. Furthermore different positive physiological properties are described. Due to rapeseed’s high content of phenolic acids, particularly sinapic acid, it is obvious to produce canolol as by-product of rapeseed processing. Roasting of rapeseed meal or cake in a fluidized bed followed by extraction with supercritical carbon dioxide of the formed canolol represents a production procedure which not impairs the commercial oil mill process. This article summarizes results from the roasting process with rapeseed meal and cake in fluidized bed equipments of different design and size showing that it is a suitable technique to transform sinapic acid into canolol. The achieved canolol contents are at 500 mg/kg in minimum, if the material is rapidly cooled-down after reaching the optimal temperature of 165 °C. Further roasting leads to a fast reduction of the canolol content. In addition it could be observed, that the sinapic acid content is not decreasing in the same amount as the canolol content increases. Sinapic acid seems to be “reproduced” during roasting. The reaction mechanisms of the described phenomena are not known.

  20. Utilization of rapeseed pellet from fatty acid methyl esters production as an energy source.

    Science.gov (United States)

    Ciunel, Krzysztof; Klugmann-Radziemska, Ewa

    2014-01-01

    Rapeseed pellet - crushed seed residue from oil extraction is a by-product of fatty acid methyl esters production process. As other types of biomass, it can either be burned directly in furnaces or processed to increase its energetic value. Biomass is renewable, abundant and has domestic usage; the sources ofbiomass can help the world reduce its dependence on petroleum products, fossil coal and natural gas. Energetically effective utilization of rapeseed pellet could substantially improve the economic balance of an individual household in which biodiesel for fulfilling the producer's own energetic demand is obtained. In this article, the experimental results of combusting rapeseed pellet in a calorimeter, combustion in a boiler heater and the analysis of the emissions level of different pollutants in exhaust fumes during different stages of biomass boiler operation are presented. It has been proved that the pellet, a by-product of biodiesel production, is not only a valuable substitute of animal fodder, but also an excellent renewable and environmentally friendly energy source, viable for use in household tap water heating installations.

  1. USING OF SECONDARY PRODUCTS OF RAPESEED PROCESSING IN THE FOOD INDUSTRY

    Directory of Open Access Journals (Sweden)

    E. A. Raksha-Slusareva

    2014-04-01

    Full Text Available When oil and biodiesel are extracted from rapeseed, secondary derived products are formed, which are not used effectively at the moment. The article deals with the problems of possible their use in food industry. During food product preparation for special dietary consumption we used electrophysical (processing by hydroelectropulse and physical (drying, grinding, steam treatment processing of raw materials. Through the developed technology for rapeseed cake processing, we received raw materials suitable for use in food industry. On the basis of these raw materials, the «Nutrition product for special dietary consumption “Ripakovyi”» was developed. It is a part of rape seed meal obtained from the seeds with low content of glucosinolates and erucic acid processed by hydroelectropulse dried in the cabinet oven or in the convective dryer, crushed and disinfected based on a developed soft technology for biologically active substances conservation. The production of this product solves the problem of rational utilization of rapeseed meal and diversification of foods for special dietary consumption.

  2. Rapeseed oil-rich diet alters hepatic mitochondrial membrane lipid composition and disrupts bioenergetics.

    Science.gov (United States)

    Monteiro, João P; Pereira, Cláudia V; Silva, Ana M; Maciel, Elisabete; Baldeiras, Inês; Peixoto, Francisco; Domingues, Maria R; Jurado, Amália S; Oliveira, Paulo J

    2013-12-01

    Diet is directly related with physiological alterations occurring at a cell and subcellular level. However, the role of diet manipulation on mitochondrial physiology is still largely unexplored. Aiming at correlating diet with alterations of mitochondrial membrane composition and bioenergetics, Wistar-Han male rats were fed for 11, 22 and 33 days with a rapeseed oil-based diet and mitochondrial bioenergetics, and membrane composition were compared at each time point with a standard diet group. Considerable differences were noticed in mitochondrial membrane lipid composition, namely in terms of fatty acyl chains and relative proportions of phospholipid classes, the modified diet inducing a decrease in the saturated to unsaturated molar ratio and an increase in the phosphatidylcholine to phosphatidylethanolamine molar ratio. Mass spectrometry lipid analysis showed significant differences in the major species of cardiolipin, with an apparent increased incorporation of oleic acid as a result of exposure to the modified diet. Rats fed the modified diet during 22 days showed decreased hepatic mitochondrial state 3 respiration and were more susceptible to Ca(2+)-induced transition pore opening. Rapeseed oil-enriched diet also appeared to promote a decrease in hydroperoxide production by the respiratory chain, although a simultaneous decrease in vitamin E content was detected. In conclusion, our data indicate that the rapeseed oil diet causes negative alterations on hepatic mitochondrial bioenergetics, which may result from membrane remodeling. Such alterations may have an impact not only on energy supply to the cell, but also on drug-induced hepatic mitochondrial liabilities.

  3. Dependence of rapeseed quality and yield on density, variety and year of production

    Directory of Open Access Journals (Sweden)

    Vujaković Milka

    2015-01-01

    Full Text Available Rapeseed is an important industrial plant in the world. In Vojvodina region of Serbia it is grown on well aerated and deep soils. Most often it is sown with the distance between the rows of 25 cm, and 5-6 cm within the row. The trial with three winter rapeseed genotypes (Banaćanka, Slavica and NS-H-2 was set up at Rimski Šančevi (Vojvodina during growing seasons of 2009/2010 and 2010/2011. Seed was sown with inter row spacing of 25 cm, and spacing within the rows of 5 cm, 8 cm, 10 cm and 16 cm. The following parameters were tested upon harvesting: seed germination, 1000 seed weight, test weight, seed yield, oil content and total protein in seed. No effect of planting density was observed on rapeseed seed quality produced in 2009/10 and 2010/11, which should be kept in mind when determining the quantity of seed required for sowing.

  4. Biology and harmfulness of Brassica pod midge (Dasineura brassicae Winn. in winter oilseed rape

    Directory of Open Access Journals (Sweden)

    Draga Graora

    2015-04-01

    Full Text Available The Brassica pod midge (Dasineura brassicae Winn. is an important pest in oilseed rape (Brasica napus L.. It develops two generations per year and overwinters in the larval stage in cocoons in soil. Immigration of the first generation adults lasted from the beginning of April until the end of May. Larvae developed in pods from mid-April to mid-June, causing pod deformation and cracking, which resulted in premature falling out of seeds and yield reduction. Pod damage amounted to 11.6%. The emergence of the second generation adults was detected at the end of May and in the first ten days of June. D. brassicae was found to lay eggs in healthy pods and no correlation was found with the cabbage seed weevil, Ceutorhynchus assimilis Paykull.

  5. NMR metabolomics of ripened and developing oilseed rape (Brassica napus) and turnip rape (Brassica rapa).

    Science.gov (United States)

    Kortesniemi, Maaria; Vuorinen, Anssi L; Sinkkonen, Jari; Yang, Baoru; Rajala, Ari; Kallio, Heikki

    2015-04-01

    The oilseeds of the commercially important oilseed rape (Brassica napus) and turnip rape (Brassica rapa) were investigated with (1)H NMR metabolomics. The compositions of ripened (cultivated in field trials) and developing seeds (cultivated in controlled conditions) were compared in multivariate models using principal component analysis (PCA), partial least squares discriminant analysis (PLS-DA), and orthogonal partial least squares discriminant analysis (OPLS-DA). Differences in the major lipids and the minor metabolites between the two species were found. A higher content of polyunsaturated fatty acids and sucrose were observed in turnip rape, while the overall oil content and sinapine levels were higher in oilseed rape. The genotype traits were negligible compared to the effect of the growing site and concomitant conditions on the oilseed metabolome. This study demonstrates the applicability of NMR-based analysis in determining the species, geographical origin, developmental stage, and quality of oilseed Brassicas. Copyright © 2014 Elsevier Ltd. All rights reserved.

  6. The complete chloroplast genome of two Brassica species, Brassica nigra and B. Oleracea.

    Science.gov (United States)

    Seol, Young-Joo; Kim, Kyunghee; Kang, Sang-Ho; Perumal, Sampath; Lee, Jonghoon; Kim, Chang-Kug

    2017-03-01

    The two Brassica species, Brassica nigra and Brassica oleracea, are important agronomic crops. The chloroplast genome sequences were generated by de novo assembly using whole genome next-generation sequences. The chloroplast genomes of B. nigra and B. oleracea were 153 633 bp and 153 366 bp in size, respectively, and showed conserved typical chloroplast structure. The both chloroplast genomes contained a total of 114 genes including 80 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. Phylogenetic analysis revealed that B. oleracea is closely related to B. rapa and B. napus but B. nigra is more diverse than the neighbor species Raphanus sativus.

  7. Bioconversion from crude glycerin by Xanthomonas campestris 2103: xanthan production and characterization

    Directory of Open Access Journals (Sweden)

    L. V. Brandão

    2013-12-01

    Full Text Available The production and rheological properties of xanthan gum from crude glycerin fermentation, a primary by-product of the biodiesel industry with environmental and health risks, were evaluated. Batch fermentations (28 °C/250 rpm /120 h were carried out using crude glycerin, 0.01% urea and 0.1% KH2PO4, (% w/v, and compared to a sucrose control under the same operational conditions, using Xanthomonas campestris strain 2103 isolate from Brazil. Its maximal production by crude glycerin fermentation was 7.23±0.1 g·L-1 at 120 h, with an apparent viscosity of 642.57 mPa·s, (2 % w/v, 25 °C, 25 s-1, 70% and 30% higher than from sucrose fermentation, respectively. Its molecular weight varied from 28.2 to 36.2×10(6 Da. The Ostwald-de-Waele model parameters (K and n indicated a pseudoplastic behavior at all concentrations (0.5 to 2.0 %, w/v and temperatures (25-85 °C, while its consistency index indicated promising rheological properties for drilling fluid applications. Therefore, crude glycerin has potential as a cost-effective and alternative substrate for non-food grade xanthan production.

  8. Limpeza clonal de mudas de videira infectadas por Xanthomonas campestris pv. viticola

    Directory of Open Access Journals (Sweden)

    Adriano Márcio Freire Silva

    2013-03-01

    Full Text Available O cancro bacteriano da videira é causado por Xanthomonas campestris pv. viticola (Xcv. Visando à limpeza clonal de mudas de 'Red Globe', foram estudados: tamanho ideal de ápices e gemas axilares para cultivo em meio de Galzy modificado (MGM; efeito da termoterapia (38ºC/30 dias; e ação de antibióticos na eliminação de Xcv em videiras infectadas. Os percentuais de contaminação por Xcv e de regeneração foram analisados, e as plantas obtidas foram indexadas em meio ágar nutritivo-dextrose-extrato de levedura-ampicilina (NYDAM, seguindo-se teste de patogenicidade. O cultivo de explantes com 3 mm possibilitou a obtenção de plantas livres da bactéria, com regeneração 14,3 vezes maior que explantes com 1 mm. A termoterapia de mudas infectadas, associada ao cultivo in vitro, não eliminou o patógeno. O cultivo de explantes com 10 mm, durante 40 dias em MGM + cefotaxima (300 mg L-1, proporcionou limpeza clonal das mudas. A indexação de plantas de videira regeneradas in vitro, quanto à infecção por Xcv utilizando NYDAM, seguida de teste de patogenicidade, é uma alternativa econômica e eficiente para produção de mudas de alta qualidade fitossanitária.

  9. Antioxidant, antibacterial, anti-inflammatory and wound healing effects of Artemisia campestris aqueous extract in rat.

    Science.gov (United States)

    Ghlissi, Zohra; Sayari, Nadhim; Kallel, Rim; Bougatef, Ali; Sahnoun, Zouheir

    2016-12-01

    This study investigated some biological properties of Artemisia campestris aqueous extract (ACAE) as well its global chemical compositions. Twenty four rats were excised on the posterior neck skin area and divided into 4 groups, treated respectively with: sterile saline, glycerol, CICAFLORA and ACAE. The wound closure rate, histopathology evolution and the superoxide dismutase (SOD), catalase (CAT) and malondialdehyde (MDA) level in skin tissue were evaluated. Anti-inflammatory activity was studied by carrageenan-induced rat paw edema. Animals were divided into 3 groups pre-treated respectively with sterile saline, acetylsalicylic acid (AA) and ACAE. The antibacterial activity was tested against six bacteria and the antioxidant activity was estimated by the 1,1-diphenyl-2-picrylhydrazyl (DPPH), reducing power and β-carotene activities. Our results demonstrated a significant improvement in wound healing progression and in oxidative stress damage in the wounds tissues of ACAE-treated rats, compared to control. ACAE-treated rats revealed also a significant inhibition of carrageenan-induced hind paws edema as confirmed by the histological analysis. In addition to the antioxidant activity, ACAE showed considerable antibacterial activities. ACAE exhibited important wound healing effect probably due to the anti-inflammatory, antibacterial and antioxidant activities of its phytochemical contents. Therefore, this study confirms its popular use and highlights its promise in the development of new drugs. Copyright © 2016 Elsevier Masson SAS. All rights reserved.

  10. Kinetic models for xanthan gum production using Xanthomonas campestris from molasses

    Directory of Open Access Journals (Sweden)

    S.L. GILANI

    2011-06-01

    Full Text Available The effects of media temperature, agitation rate and molasses concentration on the yield of fermentation in xanthan gum production process were investigated. Xanthan gum was produced in batch fermentation by Xanthomonas campestris PTCC 1473 from molasses. At 32 C, 500 rpm and media with 30 g/l of total sugar, maximum production of xanthan gum (17.1 g/l was achieved. For the purity of the xanthan FTIR spectrum was obtained. The identified spectrum was compared with the commercial product. In batch culture, several kinetic models for the biochemical reactions were extensively studied. The growth kinetic parameters were evaluated by unstructured model and derived from the related equations. Based on Malthus and Logistic rate equations, the maximum specific growth rate, max, and initial cell dry weight, X0, were defined. Luedeking-Piret and Modified Luedeking-Piret models were applied for the product formation and substrate consumption rates. In batch experiments, the kinetic parameters for the growth associated (m, a and non-growth associated (n, b parameters were determined.

  11. Effect of alcoholic extract of guaco (Mikania glomerata on the control of dark rot (Xanthomonas campestris pv. campestris in cauliflower/ Avaliação da eficácia da tintura etanólica de guaco (Mikania glomerata no controle da podridão negra (Xanthomonas campestris pv. campestris em couve-flor

    Directory of Open Access Journals (Sweden)

    Kátia Regina Freitas Schwan-Estrada

    2006-06-01

    Full Text Available With the use of irrigation and new hybrids of cauliflower, it is possible to get production during all the year with hight yield. However, the crop has been affected by diseases, as the dark rot caused by X. campestris pv. campestris. The objective of this research work was to study the potential of Mikania glomerata for the control of this disease. Alcoholic extract 50 ºGL of M. glomerata was evaluated regarding to: in vitro antimicrobial activity through bacterial growth in 100, 250, 500 and 1000 mg L-1 of the alcoholic extract; induction of local or systemic resistance in 25 days old cauliflower, with spray of alcoholic extract concomitantly and three days before the inoculation with the pathogen (water and bordeau mixture were used as control; peroxidases activity in leaves of cauliflower treated and not treated, and harvested concomitantly, 24, 48 and 72 hours after spraying the alcoholic extract and also after inoculation. The alcoholic extract of M. glomerata showed inhibition of the bacterial growth in vitro at the concentrations of 250, 500 and 1000 mg L-1. The concentrations of 500 mg L-1 and 1000 mg L-1 inhibited 24% and 38% of the bacterial growth. This inhibition could be due to antibacterial compounds in the alcoholic extract. An inhibition of the disease in vivo occurred only in the leaves treated with 100 and 500 mg L-1 of alcoholic extract when applied concomitantly with the bacteria. This result was similar to bordeau mixture, indicating a control by direct antimicrobial activity. There was no systemic resistence induction for all treatments. The peroxidases induction was due to infectious pathogen process and not to the treatments with alcoholic extract. The results indicate the potential of M. glomerata alcoholic extract for the preventive control of cauliflower dark rot disease.Com a prática da irrigação e novos híbridos de couve-flor, é possível produzir durante todo o ano e com alta produtividade. Mas, a cultura tem

  12. Antimicrobial and Antioxidant Activities of Coumarins from the Roots of Ferulago campestris (Apiaceae

    Directory of Open Access Journals (Sweden)

    2009-02-01

    Full Text Available We report the isolation of several coumarins and the stereochemical assessment of some pyranocoumarins, as well as the antibacterial and antioxidant activities of the three most abundant ones (grandivittin, agasyllin and aegelinol benzoate isolated from the roots of Ferulago campestris collected in Sicily and of the hydrolysis product (aegelinol. Aegelinol and agasyllin showed antibacterial activity against nine ATCC and the same clinically isolated Gram-positive and Gram-negative bacterial strains. At a concentration between 16 and 125 mg/mL both coumarins showed a significant antibacterial effect against both Gram-negative and Gram-positive bacteria. In particular the ATCC strains Staphylococcus aureus, Salmonella thypii, Enterobacter cloacae and Enterobacter earogenes (MIC = 16 and 32 mg/mL for aegelinol and agasyllin, respectively were the most inhibited. Antibacterial activity was also found against Helicobacter pylori: a dose-dependent inhibition was shown between 5 and 25 mg/mL. The antioxidant activity of the coumarins was evaluated by their effects on human whole blood leukocytes (WB and on isolated polymorphonucleate (PMN chemiluminescence (CL, PMA-stimulated and resting.

  13. Xanthan biosynthesis by Xanthomonas campestris ATCC 13951 on wastewaters from white grape processing

    Directory of Open Access Journals (Sweden)

    Rončević Zorana

    2017-01-01

    Full Text Available Wastewaters from grape processing in wineries are characterized by large seasonal fluctuations in volume and composition, and are often discarded into environment with little or no treatment. The biotechnological production of valuable products is the most promising alternative for reducing the negative environmental impact and recycling these effluents. Results from previous study show that mixed winery wastewaters, after additional optimization of the medium preparation, may be a suitable raw material for industrial xanthan production. Therefore, the aim of this work was to examine the possibility of xanthan production by Xanthomonas campestris ATCC 13951 on mixed wastewaters from different stages of white grape processing in winery with initial sugars content of 20 g/L. In addition to the media characteristics and indicators of biopolymer quality, raw xanthan yield and degree of sugars conversion into product were determined in order to examine the success of performed bioprocess. The results for biopolymer yield (14.66 g/L and sugars conversion into desired product (70.21% obtained in applied experimental conditions confirm that wastewaters from white grape processing have a great potential to be used as a substrate for xanthan biosynthesis.

  14. Physiological responses of Brassica napus to fulvic acid under water stress: Chlorophyll a fluorescence and antioxidant enzyme activity

    Directory of Open Access Journals (Sweden)

    Ramin Lotfi

    2015-10-01

    Full Text Available The ameliorative effect of fulvic acid (0, 300, and 600 mg L− 1 on photosystem II and antioxidant enzyme activity of the rapeseed (Brassica napus L. plant under water stress (60, 100, and 140 mm evaporation from class A pan was studied using split plots in a randomized complete block design with three replications. Results indicated that application of fulvic acid (FA improved the maximum quantum efficiency of PSII (Fv/Fm and performance index (PI of plants under both well-watered and limited-water conditions. The time span from Fo to Fm and the energy necessary for the closure of all reaction centers was significantly increased, but the size of the plastoquinone pool was reduced with increasing water stress levels. Plants treated with FA had higher peroxidase and catalase activities under all irrigation conditions. Activities of ascorbate peroxidase and superoxide dismutase in plants increased with increasing water stress. Malondialdehyde increased under severe water stress, but application of FA significantly decreased lipid peroxidation. Production of reactive oxygen species (ROS is a common phenomenon in plants under stress. Under this condition, the balance between the production of ROS and the quenching activity of antioxidants is upset, often resulting in oxidative damage. In this study, application of FA significantly increased fluorescence of chlorophyll a, inhibiting ROS production and enhancing antioxidant enzymes activity that destroyed ROS. Thus, ROS in plant cells was reduced under water stress by application of FA and consequently lipid peroxidation was reduced.

  15. Radio-sensitivity analysis and selection of useful mutants of rape (Brassica napus L.) by gamma irradiation

    Energy Technology Data Exchange (ETDEWEB)

    Goh, Eun Jeong; Kim, Wook Jin; Kim, Jin Baek; Kim, Dong Sub; Kim, Sang Hoon; Kang, Si Yong [Korea Atomic Energy Research Institute, Jeongeup (Korea, Republic of)

    2010-09-15

    Rape (Brassica napus L.) plants are one of the major oilseed crops. The main components of rapeseed are oil (35 to 47%) and protein (15 to 32%). For the biodiesel production, the development of a new variety of rape plant with high biomass and/or oleic acid contents is required. In order to determine the optimum dose of gamma-ray irradiation, the rape seeds of cvs. Hanra (Hr), Youngsan (Ys), Tammi (Tm), and Tamra (Tr) were irradiated with a 100 {approx} 4,000 Gy dose range of gamma-rays. Considering the growth factors, the optimum doses were determined to be within the range of 600 {approx} 1,000 Gy for the selection of useful mutant lines. Six-hundred and eighty eight (688) M{sub 2} mutant lines were obtained from 600 {approx} 1,000 Gy gamma-ray-irradiated M{sub 1} plants through selfing. The growth characteristics, leaf shape, early flowering, and flower color were all investigated. The selected mutant numbers of early flowering, leaf shape, and flower color were 34, 52, and 3 from the four cultivars, respectively. These mutant lines will be used for the development of a new variety of rape plant with high biomass and oleic acid contents.

  16. Use of airborne remote sensing to detect riverside Brassica rapa to aid in risk assessment of transgenic crops

    Science.gov (United States)

    Elliott, Luisa M.; Mason, David C.; Allainguillaume, Joel; Wilkinson, Mike J.

    2009-11-01

    High resolution descriptions of plant distribution have utility for many ecological applications but are especially useful for predictive modeling of gene flow from transgenic crops. Difficulty lies in the extrapolation errors that occur when limited ground survey data are scaled up to the landscape or national level. This problem is epitomized by the wide confidence limits generated in a previous attempt to describe the national abundance of riverside Brassica rapa (a wild relative of cultivated rapeseed) across the United Kingdom. Here, we assess the value of airborne remote sensing to locate B. rapa over large areas and so reduce the need for extrapolation. We describe results from flights over the river Nene in England acquired using Airborne Thematic Mapper (ATM) and Compact Airborne Spectrographic Imager (CASI) imagery, together with ground truth data. It proved possible to detect 97% of flowering B. rapa on the basis of spectral profiles. This included all stands of plants that occupied >2m square (>5 plants), which were detected using single-pixel classification. It also included very small populations (rapa was coupled with a rather large false positive rate (43%). The latter could be reduced by using the image detections to target fieldwork to confirm species identity, or by acquiring additional remote sensing data such as laser altimetry or multitemporal imagery.

  17. Modulation of the norfloxacin resistance in Staphylococcus aureus by Croton campestris A. and Ocimum gratissimum L. Modulación de la resistencia a norfloxacina de Staphylococcus aureus por Croton A. campestris y Ocimum gratissimum L.

    Directory of Open Access Journals (Sweden)

    José P. Siqueira-Júnior

    2011-06-01

    Full Text Available

    Introduction: Some species of Staphylococcus are often recognized as etiological agents of many animal and human opportunistic infections. This study is the first test of change in resistance of
    antibiotic activity by Croton campestris A. and Ocimum gratissimum L. against multiresistant strains of Staphylococcus aureus.
    Objective: In this study, the hexane and methanol extract of Croton campestris A. and Ocimum gratissimum L. was tested for antibacterial activity alone and in combination with norfloxacin against the strain SA1199B.
    Materials and methods: The minimum inhibitory concentration (MIC and the modulatory effect of extracts was assayed using microtitre assay.
    Results: By the fact of the MIC observed was not clinically relevant (MIC= 512 to ≥1.024 μg/ml, the antibiotic activity of norfloxacin was enhanced when this antibiotic was combined with sub-inhibitory concentrations of extracts, mainly the hexane extracts.
    Conclusions: These results indicate that the assayed extracts present compounds that can be used as a putative efflux pump inhibitor, indicating that Croton campestris A. and Ocimum gratissimum L. can be a source of plant derived products with antibiotic modifier activity.

    Introducción. Algunas especies de Staphylococcus suelen ser reconocidas como agentes etiológicos de muchas infecciones oportunistas en animales y em humanos. Este estudio es la primera prueba del
    cambio en la resistencia de la actividad antibiótica por Croton campestris A. y Ocimum gratissimum L. contra cepas multirresistentes de Staphylococcus aureus.
    Objetivo. Ensayar la actividad antibacteriana de los extractos hexánicos y metanólicos de Croton campestris A. y Ocimum gratissimum L. sola y en combinación con norfloxacina sobre la cepa SA1199B.
    Materiales y métodos. Se analizó la concentración inhibitoria mínima (CIM y el efecto modulador de los extractos usando el ensayo de microtitulaci

  18. miR395 is involved in detoxification of cadmium in Brassica napus

    Energy Technology Data Exchange (ETDEWEB)

    Zhang, Liu Wei; Song, Jian Bo; Shu, Xia Xia; Zhang, Yun [Department of Biochemistry and Molecular Biology, College of Life Science, Nanjing Agricultural University, Nanjing 210095 (China); Yang, Zhi Min, E-mail: zmyang@njau.edu.cn [Department of Biochemistry and Molecular Biology, College of Life Science, Nanjing Agricultural University, Nanjing 210095 (China)

    2013-04-15

    Highlights: ► Involvement of miR395 in sulfate uptake and assimilation in B. napus. ► miR395 regulation of Cd accumulation and distribution in B. napus. ► Depression of Cd-induced oxidative stress by miR395. -- Abstract: The toxic metal cadmium (Cd) constitutes one of the major inorganic contaminants in environments. microRNAs (miRNAs) are a class of endogenous non-coding small RNAs. miR395 is conserved and regulates sulfate assimilation and distribution in higher plants, but whether it is involved in detoxification of Cd in plants has not been described. In this study, transgenic rapeseed (Brassica napus) over-expressing miR395 was identified under Cd stress. miR395-over-expressing plants showed a lower degree of Cd-induced oxidative stress than wild type. By contrast, chlorophyll, glutathione and non-protein thiols contents were higher in the transformants than wild type. Determination of growth response showed that 35S::MIR395 plants accumulated higher levels of biomass and sulfur than wild type under Cd exposure. miR395 transgenic plants had higher levels of Cd in plants, particularly at the high supply of Cd in the medium, but they tended to repress Cd translocation from roots to shoots. Simultaneously, expression of metal-tolerance genes such as BnPCS1, BnHO1 and Sultr1;1 was up-regulated under Cd stress, and the expression of the genes was more pronounced in 35S::MIR395 plants than in wild type. These results suggest that miR395 would be involved in detoxification of Cd in B. napus.

  19. Association mapping of flowering time QTLs and insight into their contributions to rapeseed growth habits

    Directory of Open Access Journals (Sweden)

    Nian eWang

    2016-03-01

    Full Text Available Plants have developed sophisticated systems to adapt to local conditions during evolution, domestication and natural or artificial selection. The selective pressures of these different growing conditions have caused significant genomic divergence within species. The flowering time trait is the most crucial factor because it helps plants to maintain sustainable development. Controlling flowering at appropriate times can also prevent plants from suffering from adverse growth conditions, such as drought, winter hardness, and disease. Hence, discovering the genome-wide genetic mechanisms that influence flowering time variations and understanding their contributions to adaptation should be a central goal of plant genetics and genomics. A global core collection panel with 448 inbred rapeseed lines was first planted in four independent environments, and their flowering time traits were evaluated. We then performed a genome-wide association mapping of flowering times with a 60 K SNP array for this core collection. With quality control and filtration, 20,342 SNP markers were ultimately used for further analyses. In total, 312 SNPs showed marker-trait associations in all four environments, and they were based on a threshold p value of 4.06x10-4; the 40 QTLs showed significant association with flowering time variations. To explore flowering time QTLs and genes related to growth habits in rapeseed, selection signals related to divergent habits were screened at the genome-wide level and 117 genomic regions were found. Comparing locations of flowering time QTLs and genes with these selection regions revealed that 20 flowering time QTLs and 224 flowering time genes overlapped with 24 and 81 selected regions, respectively. Based on this study, a number of marker-trait associations and candidate genes for flowering time variations in rapeseed were revealed. Moreover, we also showed that both flowering time QTLs and genes play important roles in rapeseed growth

  20. The Xanthomonas campestris gumD gene required for synthesis of xanthan gum is involved in normal pigmentation and virulence in causing black rot.

    Science.gov (United States)

    Chou, F L; Chou, H C; Lin, Y S; Yang, B Y; Lin, N T; Weng, S F; Tseng, Y H

    1997-04-07

    A cloned 4.1-kb EcoRI fragment from Xanthomonas campestris pv. campestris was previously shown to complement the non-mucoid mutant P22 and increase xanthan gum production after being transformed into the wild-type strain Xc17. The gene responsible for these effects was identified, sequenced, and shown to be the gumD gene which has previously been proposed to encode glucose transferase activity, an enzyme required for adding the first glucose residue to the isoprenoid glycosyl carrier lipid during xanthan synthesis. A gumD mutant, isolated from Xc17 by gene replacement, was shown to possess altered pigment xanthomonadin profiles and exhibit reduced virulence in causing black rot in broccoli. This study appears to be the first to demonstrate that interruption of a gene required for xanthan synthesis can lead to reduced virulence of X. campestris.

  1. Epidemiological studies on Brassica vegetables and cancer risk

    NARCIS (Netherlands)

    Verhoeven, D.T.H.; Goldbohm, R.A.; Poppel, G. van; Verhagen, H.; Brandt, P.A. van den

    1996-01-01

    This paper gives an overview of the epidemiological data concerning the cancer-preventive effect of brassica vegetables, including cabbage, kale, broccoli, Brussels sprouts, and cauliflower. The protective effect of brassicas against cancer may be due to their relatively high content of

  2. A review of mechanisms underlying anticarcinogenicity by brassica vegetables

    NARCIS (Netherlands)

    Verhoeven, D.T.H.; Verhagen, H.; Goldbohm, R.A.; Brandt, P.A. van den; Poppel, G. van

    1997-01-01

    The mechanisms by which brassica vegetables might decrease the risk of cancer are reviewed in this paper. Brassicas, including all types of cabbages, broccoli, cauliflower and Brussels sprouts, may be protective against cancer due to their relatively high glucosinolate content. Glucosinolates are

  3. Study of total seed storage protein in indigenous Brassica species ...

    African Journals Online (AJOL)

    hope&shola

    2010-11-08

    Nov 8, 2010 ... mainly depends on two species, Brassica napus L. and. *Corresponding author. E-mail:nalipk82@yahoo.com. Brassica rapa L. The oil and protein percentage in the seed of these species are 40% or more and 30 to. 35%,Respectively (Nasar et al., 2006). In a common practice, genetic improvement is easy ...

  4. Isolation of an ascorbate peroxidase in Brassica napus and analysis ...

    African Journals Online (AJOL)

    In Brassica napus, ATP6 is related to Pol cytoplasmic male sterility. To understand the mechanism of Pol CMS, proteins which interact with ATP6 were screened in a yeast two-hybrid system. A partial sequence of a putative and ascorbate peroxidase (Bn-APX) was isolated from Brassica napus. By use of rapid amplification ...

  5. Identification and characterization of microRNAs in oilseed rape (Brassica napus) responsive to infection with the pathogenic fungus Verticillium longisporum using Brassica AA (Brassica rapa) and CC (Brassica oleracea) as reference genomes

    National Research Council Canada - National Science Library

    Shen, Dan; Suhrkamp, Ina; Wang, Yu; Liu, Shenyi; Menkhaus, Jan; Verreet, Joseph‐Alexander; Fan, Longjiang; Cai, Daguang

    2014-01-01

    .... To identify oilseed rape mi RNA s, we deep‐sequenced two small RNA libraries made from V. longisporum infected/noninfected roots and employed Brassica rapa and Brassica oleracea genomes as references for mi RNA prediction and characterization...

  6. Fields of application for the by-products of extraction and transesterification of rapeseed oil; Anvaendningsomraaden foer biprodukterna vid pressning och omfoerestring av rapsolja

    Energy Technology Data Exchange (ETDEWEB)

    Bernesson, Sven

    2007-07-01

    Rapeseed contains 40-50% oil that can be extracted by pressing and possibly subsequent extraction. The residue, rapeseed cake, normally contains 10-25% oil, but rapeseed meal subjected to extraction only contains a few percent oil. Rapeseed cake and rapeseed meal can be used as animal feed, fuel, biogas substrate or fertiliser. If the extracted oil is used as a vehicle fuel it is normally transesterified to rapeseed oil methyl ester and then glycerol is produced as a by-product. Glycerol can be used for animal feed, fuel, biogas substrate or in the chemical industry as a raw material or additive in several products. The main purpose of this work was to evaluate how rapeseed cake and rapeseed meal, together with glycerol from transesterification of rapeseed oil, could be used in different applications, and to calculate their economic values in these uses. Used as a ruminant feed, current rapeseed cultivars can provide the entire dietary protein requirement. Up to 10% of the feed or concentrate mix for pigs, poultry and horses can comprise rapeseed feed. For piglets and horses, the palatability may limit the amount fed. The amount of rapeseed cake fed is restricted by its oil content. Normally, ruminants can manage 5% fat and horses about 2% fat in concentrate, and pigs 5% and poultry 1-1.5% fat in the overall diet. Glycerol can be an energy component of the feed mix. Cattle, sheep and pigs have been successfully fed a mixture containing 5-10% glycerol, and poultry a mixture containing 5%. Glycerol works well as a binding agent in feed pellet manufacture, with an admixture of 2-3% giving a more solid pellet. Rapeseed cake and rapeseed meal may be incinerated, but produce an ash with a relatively low melting-point, causes sintering and deposits to form in the furnace. The amount of ash is rather high, about 6%. The high nitrogen content (4-6% of dry matter) gives high nitric oxide emissions, often 2-3.6 times the emissions of fuels deficient in nitrogen. The high oil

  7. Essential Oil Variability in Natural Populations of Artemisia campestris (L.) and Artemisia herba-alba (Asso) and Incidence on Antiacetylcholinesterase and Antioxidant Activities.

    Science.gov (United States)

    Younsi, Faten; Mehdi, Sameh; Aissi, Oumayma; Rahali, Najoua; Jaouadi, Rym; Boussaid, Mohamed; Messaoud, Chokri

    2017-07-01

    The intraspecific variability of Artemisia herba-alba and A. campestris essential oils and the evaluation of their antioxidant and antiacetylcholinesterase activities were determined. Artemisia herba-alba essential oil was found rich in camphor (19.61%), α-thujone (19.40%), β-thujone (9.44%), chrysanthenone (9.26%), and trans-sabinyl acetate (8.43%). The major compounds of A. campestris essential oil were germacrene D (16.38%), β-pinene (16.33%), and limonene (9.17%). Significant variation in the essential oil composition was observed among populations of each species. The divergence between populations was attributed to the variation of some climatic factors such as altitude, annual rainfall, winter cold stress, summer precipitation, summer drought stress, evapotranspiration, and humidity. Artemisia herba-alba and A. campestris essential oils exhibited promising antioxidant and antiacetylcholinesterase activities. The level of activity varied significantly according to the species and the essential oil. The highest scavenging activity (IC 50 = 0.14 mg/ml) and the uppermost capacity to prevent β-carotene bleaching (IC 50 = 0.10 mg/ml) characterized A. campestris from population 6. A. campestris population 3 possessed the uppermost ability to reduce ferric ions (450.7 μmol Fe 2+ /g EO). The population 2 of A. campestris showed the strongest antiacetylcholinesterase activity (IC 50 = 0.02 mg/ml). The variation of these activities between the essential oils was explained by their composition differences. © 2017 Wiley-VHCA AG, Zurich, Switzerland.

  8. Sensitive and specific detection of Xanthomonas campestris pv. pelargonii with DNA primers and probes identified by random amplified polymorphic DNA analysis.

    Science.gov (United States)

    Manulis, S; Valinsky, L; Lichter, A; Gabriel, D W

    1994-11-01

    The random amplified polymorphic DNA method was used to distinguish strains of Xanthomonas campestris pv. pelargonii from 21 other Xanthomonas species and/or pathovars. Among the 42 arbitrarily chosen primers evaluated, 3 were found to reveal diagnostic polymorphisms when purified DNAs from compared strains were amplified by the PCR. The three primers revealed DNA amplification patterns which were conserved among all 53 strains tested of X. campestris pv. pelargonii isolated from various locations worldwide. The distinctive X. compestris pv. pelargonii patterns were clearly different from those obtained with any of 46 other Xanthomonas strains tested. An amplified 1.2-kb DNA fragment, apparently unique to X. campestris pv. pelargonii by these random amplified polymorphic DNA tests, was cloned and evaluated as a diagnostic DNA probe. It hybridized with total DNA from all 53 X. campestris pv. pelargonii strains tested and not with any of the 46 other Xanthomonas strains tested. The DNA sequence of the terminal ends of this 1.2-kb fragment was obtained and used to design a pair of 18-mer oligonucleotide primers specific for X. campestris pv. pelargonii. The custom-synthesized primers amplified the same 1.2-kb DNA fragment from all 53 X. campestris pv. pelargonii strains tested and failed to amplify DNA from any of the 46 other Xanthomonas strains tested. DNA isolated from saprophytes associated with the geranium plant also did not produce amplified DNA with these primers. The sensitivity of the PCR assay using the custom-synthesized primers was between 10 and 50 cells.(ABSTRACT TRUNCATED AT 250 WORDS)

  9. Establishment of an in vitro system for studies on the induced resistance of cotton to Xanthomonas campestris pv. malvacearum Estabelecimento de sistema in vitro para estudos da resistência induzida à Xanthomonas campestris pv. malvacearum em algodoeiro

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    ADILSON KENJI KOBAYASHI

    2000-04-01

    Full Text Available An in vitro system for studying the resistance response of cotton (Gossypium hirsutum L. to Xanthomonas campestris pv. malvacearum was investigated. Cell suspension cultures, established from hypocotyl-derived callus of cotton cultivar 101-102B, were treated with bacterial extracellular polysaccharides (EPS extracted from the incompatible race 18 of X. campestris pv. malvacearum. EPS at 600 mug/mL caused pronounced darkening of the suspension cultures, as indicative of cell death, 48 hours after incubation. Protein electrophoresis analysis of the time course of EPS-treated cells showed differential accumulation of several protein bands after 12-24 hours. The time course of protein accumulation and cell death was consistent with an elicitor-mediated hypersensitive response.Desenvolveu-se um sistema in vitro para estudar a resistência do algodoeiro (Gossypium hirsutum L. à Xanthomonas campestris pv. malvacearum. Foram utilizados calos originados a partir de hipocótilos da cultivar de algodoeiro 101-102B para estabelecer culturas de células em suspensão, as quais foram tratadas com polissacarídeos extracelulares bacterianos (EPS extraídos da raça incompatível 18 de X. campestris pv. malvacearum. O tratamento com EPS, na concentração de 600 mig/mL, causou acentuado escurecimento das culturas em suspensão, indicativo de morte celular, 48 horas após a incubação. A análise temporal do perfil eletroforético de proteínas extraídas das células tratadas com EPS mostrou um acúmulo diferencial de diversas proteínas após 12-24 horas. O acúmulo de proteínas e a morte celular ao longo do período estudado foram consistentes com um padrão de resposta de hipersensibilidade causada por elicitores.

  10. Chemical composition, vasorelaxant, antioxidant and antiplatelet effects of essential oil of Artemisia campestris L. from Oriental Morocco.

    Science.gov (United States)

    Dib, Ikram; Fauconnier, Marie-Laure; Sindic, Marianne; Belmekki, Fatima; Assaidi, Asmae; Berrabah, Mohamed; Mekhfi, Hassane; Aziz, Mohammed; Legssyer, Abdelkhaleq; Bnouham, Mohamed; Ziyyat, Abderrahim

    2017-01-31

    Artemisia campestris L. (Asteraceae) is a medicinal herb traditionally used to treat hypertension and many other diseases. Hence, this study is aimed to analyze the essential oil of A. campestris L (AcEO) and to investigate the antiplatelet, antioxidant effects and the mechanisms of its vasorelaxant effect. The chemical composition of AcEO was elucidated using GC/MS analysis. Then, the antioxidant effect was tested on DPPH radical scavenging and on the prevention of β-carotene bleaching. The antiplatelet effect was performed on the presence of the platelet agonists: thrombin and ADP. The mechanism of action of the vasorelaxant effect was studied by using the cellular blockers specified to explore the involvement of NO/GC pathway and in the presence of calcium channels blockers and potassium channels blockers. AcEO is predominated by the volatiles: spathulenol, ß-eudesmol and p-cymene. The maximal antioxidant effect was obtained with the dose 2 mg/ml of AcEO. The dose 1 mg/ml of AcEO showed a maximum antiplatelet effect of, respectively 49.73% ±9.54 and 48.20% ±8.49 on thrombin and ADP. The vasorelaxation seems not to be mediated via NOS/GC pathway neither via the potassium channels. However, pretreatment with calcium channels blockers attenuated this effect, suggesting that the vasorelaxation is mediated via inhibition of L-type Ca 2+ channels and the activation of SERCA pumps of reticulum plasma. This study confirms the antioxidant, antiplatelet and vasorelaxant effects of A.campestris L essential oil. However, the antihypertensive use of this oil should be further confirmed by the chemical fractionation and subsequent bio-guided assays.

  11. An Essential Regulatory System Originating from Polygenic Transcriptional Rewiring of PhoP-PhoQ of Xanthomonas campestris.

    Science.gov (United States)

    Peng, Bao-Yu; Pan, Yue; Li, Ru-Jiao; Wei, Jin-Wei; Liang, Fang; Wang, Li; Wang, Fang-Fang; Qian, Wei

    2017-08-01

    How essential, regulatory genes originate and evolve is intriguing because mutations of these genes not only lead to lethality in organisms, but also have pleiotropic effects since they control the expression of multiple downstream genes. Therefore, the evolution of essential, regulatory genes is not only determined by genetic variations of their own sequences, but also by the biological function of downstream genes and molecular mechanisms of regulation. To understand the origin of essential, regulatory genes, experimental dissection of the complete regulatory cascade is needed. Here, we provide genetic evidences to reveal that PhoP-PhoQ is an essential two-component signal transduction system in the gram-negative bacterium Xanthomonas campestris, but that its orthologs in other bacteria belonging to Proteobacteria are nonessential. Mutational, biochemical, and chromatin immunoprecipitation together with high-throughput sequencing analyses revealed that phoP and phoQ of X. campestris and its close relative Pseudomonas aeruginosa are replaceable, and that the consensus binding motifs of the transcription factor PhoP are also highly conserved. PhoP Xcc in X. campestris regulates the transcription of a number of essential, structural genes by directly binding to cis-regulatory elements (CREs); however, these CREs are lacking in the orthologous essential, structural genes in P. aeruginosa, and thus the regulatory relationships between PhoP Pae and these downstream essential genes are disassociated. Our findings suggested that the recruitment of regulatory proteins by critical structural genes via transcription factor-CRE rewiring is a driving force in the origin and functional divergence of essential, regulatory genes. Copyright © 2017 by the Genetics Society of America.

  12. Rapeseed oil fortified with micronutrients reduces atherosclerosis risk factors in rats fed a high-fat diet

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    Yang Jin'e

    2011-06-01

    Full Text Available Abstract Background Micronutrients polyphenols, tocopherols and phytosterols in rapeseed exert potential benefit to cardiovascular system, but most of these micronutrients are removed by the refining process. The aim of this study was to determine the effect of rapeseed oil fortified with these micronutrients on the atherosclerosis risk factors in rats fed a high-fat diet. Methods The rodent diet contained 20% fat whose source was refined rapeseed oil (RRO or fortified refined rapeseed oil with low, middle and high quantities of these micronutrients (L-, M- and H-FRRO. Forty male SD rats were divided into four groups. One group received RRO diet and other groups received L-, M- and H-FRRO diet for 10 weeks. Results Micronutrients supplementation significantly increased plasma antioxidant defense capacities, as evaluated by the significant elevation in the activities of GPx, CAT and SOD as well as the level of GSH, and the significant decline in lipid peroxidation. These micronutrients also reduced the plasma contents of TG, TC and LDL-C and increased the ratio of HDL-C/LDL-C. In addition, in parallel with the enhancement of these micronutrients, plasma levels of IL-6 and CRP declined remarkably. Conclusion Rapeseed oil fortified with micronutrients polyphenols, tocopherols and phytosterols may contribute to prevent atherogenesis by ameliorating plasma oxidative stress, lipid profile and inflammation.

  13. Rapeseed oil fortified with micronutrients reduces atherosclerosis risk factors in rats fed a high-fat diet

    Science.gov (United States)

    2011-01-01

    Background Micronutrients polyphenols, tocopherols and phytosterols in rapeseed exert potential benefit to cardiovascular system, but most of these micronutrients are removed by the refining process. The aim of this study was to determine the effect of rapeseed oil fortified with these micronutrients on the atherosclerosis risk factors in rats fed a high-fat diet. Methods The rodent diet contained 20% fat whose source was refined rapeseed oil (RRO) or fortified refined rapeseed oil with low, middle and high quantities of these micronutrients (L-, M- and H-FRRO). Forty male SD rats were divided into four groups. One group received RRO diet and other groups received L-, M- and H-FRRO diet for 10 weeks. Results Micronutrients supplementation significantly increased plasma antioxidant defense capacities, as evaluated by the significant elevation in the activities of GPx, CAT and SOD as well as the level of GSH, and the significant decline in lipid peroxidation. These micronutrients also reduced the plasma contents of TG, TC and LDL-C and increased the ratio of HDL-C/LDL-C. In addition, in parallel with the enhancement of these micronutrients, plasma levels of IL-6 and CRP declined remarkably. Conclusion Rapeseed oil fortified with micronutrients polyphenols, tocopherols and phytosterols may contribute to prevent atherogenesis by ameliorating plasma oxidative stress, lipid profile and inflammation. PMID:21663699

  14. Standardized ileal digestibility of amino acids in European soya bean and rapeseed products fed to growing pigs.

    Science.gov (United States)

    Kaewtapee, C; Mosenthin, R; Nenning, S; Wiltafsky, M; Schäffler, M; Eklund, M; Rosenfelder-Kuon, P

    2017-10-25

    This study was conducted to determine the chemical composition and standardized ileal digestibility coefficients (SID) of crude protein (CP) and amino acids (AA) of European soya bean and rapeseed products in pigs. Six soya bean and two rapeseed products were used as the sole dietary source of CP and AA, including raw (FFSB) and roasted full-fat soya beans (FFSBRoasted ), soya bean (SBC) and rapeseed cake (RSC), and rapeseed meal (RSM) from Bavaria (Germany), soya bean meal (SBM) from the Danube region (Austria; SBMAustria ), a commercially available standard SBM (SBMStd ) and an imported genetically modified organism-free SBM (SBMGMO-free ). Eight ileal- cannulated pigs with an initial body weight of 32 ± 2 kg were allotted to a row-column design with eight diets and six periods of seven days each. Trypsin inhibitor activity (TIA) ranged from 1.8 in SBMStd to 24.5 mg/g DM in FFSB. The SID of CP and all AA in FFSBRoasted were greater than in FFSB, but lower when compared to SBC and SBMAustria (p soya bean and rapeseed products as influenced by differences in processing conditions. European SBC and SBMAustria can be used as alternative to imported SBMGMO-free and SBMStd in diets for growing pigs. © 2017 Blackwell Verlag GmbH.

  15. Subgenome parallel selection is associated with morphotype diversification and convergent crop domestication in Brassica rapa and Brassica oleracea.

    Science.gov (United States)

    Cheng, Feng; Sun, Rifei; Hou, Xilin; Zheng, Hongkun; Zhang, Fenglan; Zhang, Yangyong; Liu, Bo; Liang, Jianli; Zhuang, Mu; Liu, Yunxia; Liu, Dongyuan; Wang, Xiaobo; Li, Pingxia; Liu, Yumei; Lin, Ke; Bucher, Johan; Zhang, Ningwen; Wang, Yan; Wang, Hui; Deng, Jie; Liao, Yongcui; Wei, Keyun; Zhang, Xueming; Fu, Lixia; Hu, Yunyan; Liu, Jisheng; Cai, Chengcheng; Zhang, Shujiang; Zhang, Shifan; Li, Fei; Zhang, Hui; Zhang, Jifang; Guo, Ning; Liu, Zhiyuan; Liu, Jin; Sun, Chao; Ma, Yuan; Zhang, Haijiao; Cui, Yang; Freeling, Micheal R; Borm, Theo; Bonnema, Guusje; Wu, Jian; Wang, Xiaowu

    2016-10-01

    Brassica species, including crops such as cabbage, turnip and oilseed, display enormous phenotypic variation. Brassica genomes have all undergone a whole-genome triplication (WGT) event with unknown effects on phenotype diversification. We resequenced 199 Brassica rapa and 119 Brassica oleracea accessions representing various morphotypes and identified signals of selection at the mesohexaploid subgenome level. For cabbage morphotypes with their typical leaf-heading trait, we identified four subgenome loci that show signs of parallel selection among subgenomes within B. rapa, as well as four such loci within B. oleracea. Fifteen subgenome loci are under selection and are shared by these two species. We also detected strong subgenome parallel selection linked to the domestication of the tuberous morphotypes, turnip (B. rapa) and kohlrabi (B. oleracea). Overall, we demonstrated that the mesohexaploidization of the two Brassica genomes contributed to their diversification into heading and tuber-forming morphotypes through convergent subgenome parallel selection of paralogous genes.

  16. Temperature sensitivity of resistance to two pathotypes of Plasmodiophora brassicae in Brassica oleracea

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    R. L. Gabrielson

    2013-12-01

    Full Text Available Several methods were evaluated in an attempt to develop a greenhouse screening procedure that would predict field resistance of brassica breeding lines to clubroot disease caused by Plasmodiophora brassicae. Several Brassica oleracea cultivars and breeding lines bred for resistance to Plasmodiophora brassicae and a susceptible Chinese cabbage cultivar were exposed to high levels of inoculum of both pathotypes PB 6, PB 7 at 12, 15, 20, 25 and 30°C. No infection occurred on any host at 12°C. Chinese cabbage was heavily diseased from 15-30°C. Bagder Shipper cabbage, a cauliflower deriving resistance from this variety, and Oregon CR-1 broccoli were resistant to pathotype PB 6 at 15 and 20°C and partially resistant at 25 and 30°C. They were resistant to pathotype PB 7 and 15°C and almost totally susceptible at 20, 25° and 30°C. Oregon cabbage line OR 123 was resistant to pathotype PB 6 at 15°C at almost completely susceptible at 20, 25 and 30°C. It was resistant to pathotype PB 7 at all temperatures. Temperature sensitivity of resistance can partially explain why breeding lines are resistant in field trials and susceptible in greenhouse tests.

  17. Genome resequencing and comparative variome analysis in a Brassica rapa and Brassica oleracea collection

    NARCIS (Netherlands)

    Cheng, Feng; Wu, Jian; Cai, Chengcheng; Fu, Lixia; Liang, Jianli; Borm, Theo; Zhuang, Mu; Zhang, Yangyong; Zhang, Fenglan; Bonnema, Guusje; Wang, Xiaowu

    2016-01-01

    The closely related species Brassica rapa and B. oleracea encompass a wide range of vegetable, fodder and oil crops. The release of their reference genomes has facilitated resequencing collections of B. rapa and B. oleracea aiming to build their variome datasets. These data can be used to

  18. Salacia campestris root bark extract: peroxidase inhibition, antioxidant and antiradical profile

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    José Carlos Rebuglio Vellosa

    2009-03-01

    Full Text Available Reactive oxygen species (ROS and free radical species have been implicated in initiating or accompanying many diseases in living organisms; there is thus, a continual need for antioxidants molecules to inactivate ROS/free radicals. Many studies of plants crude extracts have demonstrated free-radical scavenging and antioxidant action. Salacia species have long been used, in several countries, as traditional medicines against certain diseases and for their anti-inflammatory properties. In this study, Salacia campestris Walp (Hippocrateaceae root bark ethanol extract (ScEtOH was assessed for its ability to scavenge free radicals and reactive oxygen species; the results were expressed as percentage inhibition of the active species. ScEtOH was efficient against studied species: DPPH radical (obtained inhibition = 30%, ABTS•+ (IC50 = 1.8±0.8 μg/mL, HOCl (IC50 = 1.7 ± 0.1 μg/mL, O2•- (obtained inhibition = 32%, and NO• (obtained inhibition = 18 %. Peroxidase activity inhibition was evaluated through the guaiacol oxidation reaction catalyzed by hemin, HRP and myeloperoxidase (MPO; data showed that ScEtOH at 10 μg/mL led to 54 and 51% of inhibition, respectively, for the hemin and HRP systems. In the MPO system, ScEtOH promoted a 50% inhibition at 8.9 μg/mL, whereas quercetin, a powerful MPO inhibitor, inhibited this system at 1.35 μg/mL.Espécies reativas do oxigênio (ERO e radicais livres estão relacionados ao início ou à exacerbação de muitas doenças em organismos vivos; existindo portanto uma necessidade contínua por moléculas antioxidantes que inativem as ERO e radicais livres. Muitos estudos com extratos brutos de plantas têm demonstrado propriedades antioxidantes e seqüestradoras de radicais livres. Espécies de Salacia são utilizadas, em muitos países, como remédio tradicional contra certas doenças e por suas propriedades antiinflamatórias. Neste estudo, o extrato bruto etanólico da casca da raiz da Salacia

  19. Effects of endogenous and exogenous micronutrients in rapeseed oils on the antioxidant status and lipid profile in high-fat fed rats.

    Science.gov (United States)

    Deng, Qianchun; Yu, Xiao; Xu, Jiqu; Wang, Lan; Huang, Fenghong; Huang, Qingde; Liu, Changsheng; Ma, Fangli

    2014-12-19

    Micronutrients in oil reduce one or more risk factors of cardiovascular diseases, while the contents of micronutrients in oil are relatively poor, which is insufficient to reverse the metabolic disorders at different stages of progress. The aim of this study was to investigate the effects of endogenous micronutrients in optimized cold-pressed rapeseed oil and restoratively added or fortified micronutrients in traditional refined rapeseed oil (restoring micronutrients to be nearly equal to or significantly higher than levels in crude rapeseed oil) on the antioxidant status and lipid profile in high-fat fed rats. Male Wistar rats were fed high-fat diets containing different rapeseed oils for 4 weeks, including the standard refined rapeseed oil(SRO), optimized cold-pressed rapeseed oil(CRO) and the traditional refined rapeseed oil with restorative addition or fortification of micronutrients (LF, HF-SRO). CRO exhibited significant increases in contents of tocopherols (+13%), phytosterols (+34%), polyphenols (+92%) and phospholipids (+725%) compared with SRO, as well as the total antioxidant capacities (+82-125%) (pmicronutrients was comparable to the optimized cold-pressed rapeseed oil in improving the antioxidant status and lipid profile of high-fat fed rats.

  20. Role of glucosinolates in the causation of liver haemorrhages in laying hens fed water-extracted or heat-treated rapeseed cakes.

    Science.gov (United States)

    Wight, P A; Scougall, R K; Shannon, D W; Wells, J W; Mawson, R

    1987-11-01

    Glucosinolates were removed from whole rapeseed by a hot-water extraction procedure or depleted by heat treatment. When laying hens were maintained for three months on diets containing about 300 g kg-1 of these rapeseed cakes, the incidence of liver haemorrhages detected at post mortem examination was similar to that in birds maintained on 300 g kg-1 commercial rapeseed meal and significantly greater than in control birds fed soya-based diets. The effectiveness of glucosinolate extraction or depletion was determined by chemical analysis and by histological examination of the thyroid glands. Histologically the haemorrhages were similar after feeding extracted and commercial rapeseed meals. Diets containing mixtures of nitriles and glucosinolates severely depressed food intake and egg production but did not cause a greater incidence of haemorrhages than the other rapeseed products tested. Mortality from causes other than liver haemorrhage was higher with the diets containing rapeseed and this suggests that rapeseed has a more generalised effect on the body's defence mechanisms. These observations suggest that other factors in rapeseed meal, alone or acting with glucosinolates, may be responsible for inducing liver haemorrhages in laying hens.

  1. Plasmodiophora brassicae: a review of an emerging pathogen of the Canadian canola (Brassica napus) crop.

    Science.gov (United States)

    Hwang, Sheau-Fang; Strelkov, Stephen E; Feng, Jie; Gossen, Bruce D; Howard, Ron J

    2012-02-01

    Plasmodiophora brassicae causes clubroot disease in cruciferous plants, and is an emerging threat to Canadian canola (Brassica napus) production. This review focuses on recent studies into the pathogenic diversity of P. brassicae populations, mechanisms of pathogenesis and resistance, and the development of diagnostic tests for pathogen detection and quantification. Plasmodiophora brassicae is a soil-borne, obligate parasite within the class Phytomyxea (plasmodiophorids) of the protist supergroup Rhizaria. Clubroot development is characterized by the formation of club-shaped galls on the roots of affected plants. Above-ground symptoms include wilting, stunting, yellowing and premature senescence. DISEASE CYCLE: Plasmodiophora brassicae first infects the root hairs, producing motile zoospores that invade the cortical tissue. Secondary plasmodia form within the root cortex and, by triggering the expression of genes involved in the production of auxins, cytokinins and other plant growth regulators, divert a substantial proportion of plant resources into hypertrophic growth of the root tissues, resulting in the formation of galls. The secondary plasmodia are cleaved into millions of resting spores and the root galls quickly disintegrate, releasing long-lived resting spores into the soil. A serine protease, PRO1, has been shown to trigger resting spore germination. PHYSIOLOGICAL SPECIALIZATION: Physiological specialization occurs in populations of P. brassicae, and various host differential sets, consisting of different collections of Brassica genotypes, are used to distinguish among pathotypes of the parasite. DETECTION AND QUANTIFICATION: As P. brassicae cannot be cultured, bioassays with bait plants were traditionally used to detect the pathogen in the soil. More recent innovations for the detection and quantification of P. brassicae include the use of antibodies, quantitative polymerase chain reaction (qPCR) and qPCR in conjunction with signature fatty acid analysis

  2. GERMINATION TEST IN SEEDS OF MELOTHRIA CAMPESTRIS (NAUDIN H. SCHAEF. & S.S. RENNER

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    ANA CARINA DA SILVA CÂNDIDO

    2016-01-01

    Full Text Available The Cerrado occupies 25% of the Brazilian territory and is the second largest biome in South America, second only to the Amazon Rainforest. Hence, studies on the native species of the Cerrado are important for implementing conservation strategies. In this context, knowledge of the requirements and conditions for germination of seeds of these native species is essential. The Cerrado watermelon ( Melothria campestris (Naudin H. Schaef. & S.S. Renner is a plant that is not cultivated, but has been used in revegetation projects in the countryside of the Cerrado because its fruits are fed upon by fauna in times of food shortage. The purpose of this study was to determine the most appropriate methodology for the germination of the Cerrado watermelon, by identifying the best - suited substrate, the optimal temperature, and the corresponding time taken for germination . The treatments consisted of four substrates: in a paper roll, on paper, in sand, and on sand; and four temperatures: 20, 25, and 30 °C (maintained constant, and a fourth temperature treatment that alternated 20 - 30 °C. The effect of the substrates and temperatures on seed performance was evaluated using the germination test, speed index, and average time for germination. The experimental design was fully randomized, with treatments distributed in a 4 × 4 (substrates × temperatures factorial scheme, with four replications. Our results show that the temperature of 20 °C had a negative influence on germination in all substrates. Further, we found that the germination of the Cerrado watermelon seeds was best in a paper roll or on sand substrate, maintained at a constant temperature of 30 °C, or when temperature was alternated 20 - 30 °C, and the time required for germination stabilization was 30 days.

  3. Genotipos de frijol (Phaseolus Vulgaris l. resistentes a Xanthomonas campestris pv. phaseoli de Mexico

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    Rosa Navarrete

    2000-01-01

    Full Text Available Genotipos de frijol (Phaseolus vulgaris L. resistentes a Xanthomonas campestris pv. phaseoli de México. Durante 1995 se evaluó la reacción de genotipos de frijol de diversos origenes a Xcp, bajo condiciones de invernadero en el Campo Experimental del Valle de México, del INIFAP. Se realizaron tres experimentos con a120, b44 y csiete genotipos de frijol. Las plantas se inocularon por corte con navajas en la etapa V3, a y b con una mezcla de nueve cepas de Xcp y el c, con cada una de siete cepas con diferente grado de patogenicidad. La severidad se evaluó 20 días después de la inoculación, por comparación con una escala visual de nueve grados. Los datos se analizaron bajo un diseño completamente al azar. En a, los genotipos que mostraron reacción de resistencia a Xcp fueron: A 36, A 475, G 5686, G 11867, Harowood, SEA 14, XAN 266, MCD 4012 y REN 27. En b los genotipos resistentes fueron: Sequía Durango, Taylor y XAN 30. En los experimentos anteriores la severidad de la enfermedad mostró una distribución normal, con el máximo número de genotipos en el grado de severidad cinco en a y seis en b. Los resultados obtenidos indican que el uso de mezclas de cepas de bacterias con diferente patogenicidad es eficiente para identificar genotipos de frijol resistentes a Xcp. Los genotipos resistentes identificados en el último experimento, mostraron respuesta diferencial e interacciones genotipo por cepa. REN 27 y SEA 14 mostraron resistencia a las cepas utilizadas

  4. Análisis comparativo de los caracteres epidérmicos en Flourensia campestris y F. oolepis (Asteraceae Comparative analysis of the epidermal characters in Flourensia campestris and F. oolepis (Asteraceae

    Directory of Open Access Journals (Sweden)

    Natalia Delbón

    Full Text Available En el presente estudio se examinaron y compararon cuantitativamente las epidermis foliares de Flourensia campestris Griseb. y F. oolepis S. F. Blake, especies endémicas que crecen en las sierras de Córdoba, Argentina. Para ello, se seleccionaron cinco variables: número de células epidérmicas propiamente dichas, estomas, tricomas glandulares y eglandulares e índice estomático. Los resultados obtenidos se evaluaron por métodos estadísticos; ellos indican que hay diferencias significativas entre ambas especies en las variables frecuencia de estomas, de células propiamente dichas, de tricomas glandulares e índice estomático. Estos datos podrían ser de interés para su reconocimiento cuando se dispone de muestras pequeñas o fragmentos.This study provides comparative analyses of foliar epidermis in Flourensia campestris Griseb. and F. oolepis S. F. Blake, endemic species that grow in Córdoba, Argentina. Five variables were selected: number of epidermal cells, stomata, glandular and eglandular trichomes and stomatal index. Results were evaluated by statistical methods; they show that there are significant differences between the variables of both species; these data could be of interest for their identification, when only are available small samples and fragments.

  5. A Phylogenetic Analysis of Chloroplast Genomes Elucidates the Relationships of the Six Economically Important Brassica Species Comprising the Triangle of U

    NARCIS (Netherlands)

    Li, Peirong; Zhang, Shujiang; Li, Fei; Zhang, Shifan; Zhang, Hui; Wang, Xiaowu; Sun, Rifei; Bonnema, Guusje; Borm, Theo J.A.

    2017-01-01

    The Brassica genus comprises many economically important worldwide cultivated crops. The well-established model of the Brassica genus, U’s triangle, consists of three basic diploid plant species (Brassica rapa, Brassica oleracea, and Brassica nigra) and three amphidiploid species (Brassica napus,

  6. Production of rapeseed oil fuel in decentralized oil extraction plants. Handbook. 2. new rev. and enl. ed.; Herstellung von Rapsoelkraftstoff in dezentralen Oelgewinnungsanlagen. Handbuch

    Energy Technology Data Exchange (ETDEWEB)

    Remmele, Edgar [Technologie- und Foerderzentrum (TFZ) im Kompetenzzentrum fuer Nachwachsende Rohstoffe, Straubing (Germany)

    2009-11-15

    Increasing oil prices, the dependence on petroleum imports and the desire to reduce the CO{sub 2} emissions, are arguments to accelerate the production and utilization of biofuels. In 2007, 3.3 million tons of biodiesel and 772,000 tons of vegetable oil were used as fuel. The technically and economically successful production of rapeseed oil fuel in decentralized oil mills requires a quality assurance. Specifically, the brochure under consideration reports on the following: (1) Oilseed processing; (2) Centralized oil production in Germany; (3) Design of a decentralized oil mill; (4) Production of rapeseed oil fuel in decentralized systems; (5) Quality assurance for rapeseed oil fuel in decentralized oil mills; (6) Properties of rapeseed oil fuel; (7) Quality of rapeseed oil fuel from decentralized oil mills; (8) Economic aspects of decentralized oil extraction; (9) Legal framework conditions.

  7. Technical and economic analysis of rapeseed oil for power generation; Technische und wirtschaftliche Wertung der energetischen Verwendung des Rapsoels

    Energy Technology Data Exchange (ETDEWEB)

    Koenczoel, S.; Bereczy, A.; Penninger, A.

    2001-07-01

    The authors investigated the combustion of raw (filtered) rapeseed oil, the combustion products, and the utilization of waste fat from slaughterhouses. The quality of atomization was investigated using pressure nozzle atomizers. A comparative analysis was made of gas oil, raw (filtered) rapeseed oil, and rapeseed methyl ester. [German] In der Landwirtschaft gibt es ein bedeutendes alternatives Brennstoffpotential, dessen energetische Verwendung am zweckdienlichsten innerhalb der landwirtschaftlichen energetischen Technologien zu verwirklichen ist. Daher untersuchten wir die Moeglichkeit der Verbrennung des rohen (filtrierten) Rapsoels im Waermekessel, den Verlauf der Verbrennung und die Zusammensetzung des Verbrennungsproduktes. Andererseits wird beansprucht, dass durch die Verbrennung des - durch die Fleischverarbeitung der Schlachthoefe entstandenen, nicht lebensmittelechten - Abfallfettes ein Teil des Energiebedarfes des verarbeitenden Betriebes gedeckt sein soll. Die Qualitaet der Zerstaeubung untersuchten wir mit Druckduesenzerstaeuber. Wir fuehrten eine vergleichende Analyse mit den Brennstoffen Gasoel, rohem (filtriertem) Rapsoel und Rapsmethylester (RME) durch. (orig.)

  8. Contamination of Chinese Cabbage Soil with Plasmodiophora brassicae

    Directory of Open Access Journals (Sweden)

    Jae-Woo Soh

    2013-09-01

    Full Text Available This research was performed to establish basic technology for Chinese cabbage clubroot chemical control by investigating the soil contamination of Plasmodiophora brassicae in major producing regions of fall Chinese cabbage. PCR primers were developed to detect P. brassicae, a causal agent of Chinese cabbage club-root that generally occurs in Cruciferae family. A primer set, PbbtgF761 and PbbtgR961, specifically amplified a 245 bp fragment from P. brassicae only. At places well known for fall Chinese cabbage, 10 out of 33 in Haenam-gun, 5 out of 13 in Yeongam-gun and Yeonggwang-gun, 1 out of 6 in Gochang-gun, 2 out of 12 in Hongseong-gun, and 5 out of 17 in Dangjin-si resulted positive for P. brassicae contamination. The results show that the soil contamination rate of P. brassicae was 30.3% in Haenam-gun, 38.5% in Yeongam-gun and Yeonggwang-gun, 16.7% in Gochang-gun, 16.7% in Hongseong-gun, and 29.4% in Dangjin-si. The six places where Chinese cabbage clubroot was visible by naked eye were 100% confirmed by the PCR test of the P. brassicae contaminated soil. Thus, simple PCR test may be utilized as an index to decide on chemical control of P. brassicae.

  9. Biocompounds from rapeseed oil industry co-stream as active ingredients for skin care applications.

    Science.gov (United States)

    Rivera, D; Rommi, K; Fernandes, M M; Lantto, R; Tzanov, T

    2015-10-01

    Despite the great number of substances produced by the skincare industry, very few of them seem to truly have an effect on the skin. Therefore, given the social implications surrounding physical appearance, the search for new bioactive compounds to prevent or attenuate skin ageing and enhance self-image is a priority of current research. In this context, being rich in valuable compounds, such as proteins, phenolics, lipids and vitamins, this study is focused on the potential activity of rapeseed press cake hydrolysates to be used as raw materials for skincare applications. In this study, the protein-rich press residue from the rapeseed oil industry was converted enzymatically into short-chain biologically active peptides using four protease products with varying substrate specificity - Alcalase 2.4L FG, Protex 6L, Protamex and Corolase 7089. The antioxidant, anti-wrinkle and anti-inflammatory activities of the obtained hydrolysates were evaluated in vitro while their biocompatibility with human skin fibroblasts was tested. All hydrolysates were biocompatible with skin fibroblasts after 24 h of exposure, while the non-hydrolysed extract induced cell toxicity. Alcalase 2,4L FG and Protex 6L-obtained hydrolysates were the most promising extracts showing improved bioactivities suitable for skin anti-ageing formulations, namely antioxidant activity, inhibiting approximately 80% cellular reactive oxidative species, anti-inflammatory and anti-wrinkle properties, inhibiting around 36% of myeloperoxidase activity and over 83% of elastase activity. The enzymatic technology applied to the rapeseed oil industry costream results in the release of bioactive compounds suitable for skincare applications. © 2015 Society of Cosmetic Scientists and the Société Française de Cosmétologie.

  10. French environmental communication on sunflower and rapeseed oils based on life cycle assessment

    Directory of Open Access Journals (Sweden)

    Badey Laureen

    2013-07-01

    Full Text Available The French “Grenelle” laws sparked a French national experiment trialling the environmental labelling of fast-moving consumer goods. The data required for this labelling scheme are generated by carrying out a life cycle assessment (LCA. The aim of this study is to provide all necessary information to fit the national experiment for two standard oils: sunflower oil and rapeseed oil. The complete oil life cycle was studied, from oilseed farming through to the end-of-life of the packaging. We focused heavily on the impacts of crushing and refining. The seed processing data was collected from different plants that are representative of the French crushing/refining industry and packaging site practice. The data inventory was used to calculate the identified environmental labelling indicators, i.e. greenhouse gas (GHG emissions and water consumption. The production of 100g of refined bulk sunflower and rapeseed emits 89 and 127 g equivalent CO2 and consumes 1.7 L and 0.8 L of water, respectively. Most impacts on the studied indicators stem from the farming phase. Energy and water consumptions during crushing and refining also weigh on the studied indicators. The results of this study provide a relevant overview of all sunflower and rapeseed oils produced in France, and are usable as standard values for vegetable oil producers and users. Oil supply chain operators can use these values to compare to their own process values and gauge the improvements brought about by their ecodesign strategies. For example, using a biomass boiler, using less packaging, and making different choices on seed suppliers can lead to a lower set of impact values.

  11. Modified carbon paste electrode as a tool for the evaluation of oxidative stability of rapeseed oil

    Directory of Open Access Journals (Sweden)

    Simona Žabčíková

    2015-10-01

    Full Text Available Carbon paste electrode was used for evaluation of oxidative stability of rapeseed oil samples using cyclic voltammetry in 0.1 mol.L-1 HCl as a supporting electrolyte. Rapeseed oil samples were exposed to daylight and oxygen in open glass baker at the laboratory condition in order to obtain oils with accelerated primary and secondary products of oxidation. The oxidation status was determinated by peroxide value and p-anisidine value. Total oxidative stability was expressed as TOTOX index. The edible oils were used for preparation (modification of the carbon paste composite material followed by the cyclic voltammetric measurement. Peroxide values significantly increased whereas p-anisinde value rather fluctuated during 40 days of storage in all the samples. Cyclic voltammograms showed anodic current peaks at 575 - 600 mV and cathodic current peaks at 400 - 425 mV. The oxidation and reduction waves diminished at pH ≥3.0 suggesting not only phenolic compounds contributed to the electrochemical characteristic of oil samples. The peroxide value or p-anisidine value did not correlate with oxidation or reduction peak currents at the potential 575 - 600 mV and 400 - 425 mV, respectively. Both cathodic and anodic currents increased with increasing TOTOX index exhibiting positive correlation with high Spearman correlation coefficient (r = 0.894 and r = 0.914 for anodic and cathodic current, respectively. Linear relationship was found for each sample individually. A caution has to be done when interpreting results since the correlation seems to be of oil sample specific. Nevertheless, the modified carbon paste electrode with rapeseed oil represents a suitable and alternative tool for determination of the oxidative state of edible oils without use of organic solvents.

  12. A re-examination of the technical feasibility and economic viability of rapeseed dehulling

    Directory of Open Access Journals (Sweden)

    Carré Patrick

    2015-05-01

    Full Text Available The recent success of dehulled sunflower meals on the French market encourages reconsideration of the possibility of applying dehulling techniques to rapeseed. Hulls account for 18−20% of rapeseed mass; they contain mostly fibres (72%, 78% and 99%, respectively of the seeds’ NDF, ADF and ADL. Complete removal of these hulls would result in a high (43% protein meal with enhanced added value. However, the technical feasibility of producing such a meal is impeded by the relatively high oil content of the hull fraction. This article presents a model of mass balance that takes account both of the purity of the “hull” and “kernel” fractions and comparisons of gross margins between conventional processing and dehulling-based processing. The value of dehulled rapeseed meal is assessed against both a range of market scenarios and the composition and price of a selection of alternative feeds. The gross margin differential favours dehulling only in periods where proteins are expensive and oil relatively cheap, as at present. Reducing the oil content of the hulls affects considerably the profitability of dehulling whereas modification of the protein content has only a modest impact. An important unknown is the effect of antinutritional factors on the final price of dehulled meals. Management of the glucosinolates residues through processing might decrease their noxiousness though the information on this is scant. Since this lack of knowledge is an impediment to the implementation of dehulling technology, research and development investments should start by addressing this question. Technical solutions could be developed to recover the oil contained in the hulls. Such solutions include expelling, aqueous extraction or tail-end dehulling after direct extraction of the seeds.

  13. Small RNA changes in synthetic Brassica napus.

    Science.gov (United States)

    Fu, Ying; Xiao, Meili; Yu, Huasheng; Mason, Annaliese S; Yin, Jiaming; Li, Jiana; Zhang, Dongqing; Fu, Donghui

    2016-09-01

    Small RNAs and microRNAs were found to vary extensively in synthetic Brassica napus and subsequent generations, accompanied by the activation of transposable elements in response to hybridization and polyploidization. Resynthesizing B. napus by hybridization and chromosome doubling provides an approach to create novel polyploids and increases the usable genetic variability in oilseed rape. Although many studies have shown that small RNAs (sRNAs) act as important factor during hybridization and polyploidization in plants, much less is known on how sRNAs change in synthetic B. napus, particularly in subsequent generations after formation. We performed high-throughput sequencing of sRNAs in S1-S4 generations of synthetic B. napus and in the homozygous B. oleracea and B. rapa parent lines. We found that the number of small RNAs (sRNAs) and microRNAs (miRNAs) doubled in synthetic B. napus relative to the parents. The proportions of common sRNAs detected varied from the S1 to S4 generations, suggesting sRNAs are unstable in synthetic B. napus. The majority of miRNAs (67.2 %) were non-additively expressed in the synthesized Brassica allotetraploid, and 33.3 % of miRNAs were novel in the resynthesized B. napus. The percentage of miRNAs derived from transposable elements (TEs) also increased, indicating transposon activation and increased transposon-associated miRNA production in response to hybridization and polyploidization. The number of target genes for each miRNA in the synthesized Brassica allotetraploid was doubled relative to the parents, enhancing the complexity of gene expression regulation. The potential roles of miRNAs and their targets are discussed. Our data demonstrate generational changes in sRNAs and miRNAs in synthesized B. napus.

  14. BRAD, the genetics and genomics database for Brassica plants

    Directory of Open Access Journals (Sweden)

    Li Pingxia

    2011-10-01

    Full Text Available Abstract Background Brassica species include both vegetable and oilseed crops, which are very important to the daily life of common human beings. Meanwhile, the Brassica species represent an excellent system for studying numerous aspects of plant biology, specifically for the analysis of genome evolution following polyploidy, so it is also very important for scientific research. Now, the genome of Brassica rapa has already been assembled, it is the time to do deep mining of the genome data. Description BRAD, the Brassica database, is a web-based resource focusing on genome scale genetic and genomic data for important Brassica crops. BRAD was built based on the first whole genome sequence and on further data analysis of the Brassica A genome species, Brassica rapa (Chiifu-401-42. It provides datasets, such as the complete genome sequence of B. rapa, which was de novo assembled from Illumina GA II short reads and from BAC clone sequences, predicted genes and associated annotations, non coding RNAs, transposable ele