A quantitative model of the major pathways for radiation-induced DNA double-strand break repair

International Nuclear Information System (INIS)

Belov, O.V.; Krasavin, E.A.; Lyashko, M.S.; Batmunkh, M.; Sweilam, N.H.

2014-01-01

We have developed a model approach to simulate the major pathways of DNA double-strand break (DSB) repair in mammalian and human cells. The proposed model shows a possible mechanistic explanation of the basic regularities of DSB processing through the nonhomologous end-joining (NHEJ), homologous recombination (HR), and single-strand annealing (SSA). It reconstructs the time-courses of radiation-induced foci specific to particular repair processes including the major intermediate stages. The model is validated for ionizing radiations of a wide range of linear energy transfer (0.2-236 keV/μm) including a relatively broad spectrum of heavy ions. The appropriate set of reaction rate constants was suggested to satisfy the kinetics of DSB rejoining for the considered types of exposure. The simultaneous assessment of three repair pathways allows one to describe their possible biological relations in response to radiation. With the help of the proposed approach, we reproduce several experimental data sets on γ-H2AX foci remaining in different types of cells including those defective in NHEJ, HR, or SSA functions.

Detecting structural breaks in time series via genetic algorithms

DEFF Research Database (Denmark)

Doerr, Benjamin; Fischer, Paul; Hilbert, Astrid

2016-01-01

of the time series under consideration is available. Therefore, a black-box optimization approach is our method of choice for detecting structural breaks. We describe a genetic algorithm framework which easily adapts to a large number of statistical settings. To evaluate the usefulness of different crossover...... and mutation operations for this problem, we conduct extensive experiments to determine good choices for the parameters and operators of the genetic algorithm. One surprising observation is that use of uniform and one-point crossover together gave significantly better results than using either crossover...... operator alone. Moreover, we present a specific fitness function which exploits the sparse structure of the break points and which can be evaluated particularly efficiently. The experiments on artificial and real-world time series show that the resulting algorithm detects break points with high precision...

Pathways for double-strand break repair in genetically unstable Z-DNA-forming sequences.

Science.gov (United States)

Kha, Diem T; Wang, Guliang; Natrajan, Nithya; Harrison, Lynn; Vasquez, Karen M

2010-05-14

DNA can adopt many structures that differ from the canonical B-form, and several of these non-canonical DNA structures have been implicated in genetic instability associated with human disease. Earlier, we found that Z-DNA causes DNA double-strand breaks (DSBs) in mammalian cells that can result in large-scale deletions and rearrangements. In contrast, the same Z-DNA-forming CG repeat in Escherichia coli resulted in only small contractions or expansions within the repeat. This difference in the Z-DNA-induced mutation spectrum between mammals and bacteria might be due to different mechanisms for DSB repair; in mammalian cells, non-homologous end-joining (NHEJ) is a major DSB repair pathway, while E. coli do not contain this system and typically use homologous recombination (HR) to process DSBs. To test the extent to which the different DSB repair pathways influenced the Z-DNA-induced mutagenesis, we engineered bacterial E.coli strains to express an inducible NHEJ system, to mimic the situation in mammalian cells. Mycobacterium tuberculosis NHEJ proteins Ku and ligase D (LigD) were expressed in E.coli cells in the presence or absence of HR, and the Z-DNA-induced mutations were characterized. We found that the presence of the NHEJ mechanism markedly shifted the mutation spectrum from small deletions/insertions to large-scale deletions (from 2% to 24%). Our results demonstrate that NHEJ plays a role in the generation of Z-DNA-induced large-scale deletions, suggesting that this pathway is associated with DNA structure-induced destabilization of genomes from prokaryotes to eukaryotes. (c) 2010 Elsevier Ltd. All rights reserved.

Genetics of x-ray induced double strand break repair in saccharomyces cerevisiae

International Nuclear Information System (INIS)

Budd, M.E.

1982-07-01

The possible fates of x-ray-induced double-strand breaks in Saccharomyces cerevisiae were examined. One possible pathway which breaks can follow, the repair pathway, was studied by assaying strains with mutations in the RAD51, RAD54, and RAD57 loci for double-strand break repair. In order of increasing radiation sensitivity one finds: rad57-1(23 0 )> rad51-1(30 0 )> rad54-3(36 0 ). At 36 0 , rad54-3 cells cannot repair double-strand breaks, while 23 0 , they can. Strains with the rad57-1 mutation can rejoin broken chromosomes at both temperatures. However, the low survival at 36 0 shows that the assay is not distinguishing large DNA fragments which allow cell survival from those which cause cell death. A rad51-1 strain could also rejoin broken chromosomes, and was thus capable of incomplete repair. The data can be explained with the hypothesis that rad54-3 cells are blocked in an early step of repair, while rad51-1 and rad57-1 strains are blocked in a later step of repair. The fate of double-strand breaks when they are left unrepaired was investigated with the rad54-3 mutation. If breaks are prevented from entering the RAD54 repair pathway they become uncommitted lesions. These lesions are repaired slower than the original breaks. One possible fate for an uncommitted lesion is conversion into a fixed lesion, which is likely to be an unrepairable or misrepaired double-strand break. The presence of protein synthesis after irradiation increases the probability that a break will enter the repair pathway. Evidence shows that increased probability of repair results from enhanced synthesis of repair proteins shortly after radiation

Human Fanconi anemia monoubiquitination pathway promotes homologous DNA repair.

Science.gov (United States)

Nakanishi, Koji; Yang, Yun-Gui; Pierce, Andrew J; Taniguchi, Toshiyasu; Digweed, Martin; D'Andrea, Alan D; Wang, Zhao-Qi; Jasin, Maria

2005-01-25

Fanconi anemia (FA) is a recessive disorder characterized by congenital abnormalities, progressive bone-marrow failure, and cancer susceptibility. Cells from FA patients are hypersensitive to agents that produce DNA crosslinks and, after treatment with these agents, have pronounced chromosome breakage and other cytogenetic abnormalities. Eight FANC genes have been cloned, and the encoded proteins interact in a common cellular pathway. DNA-damaging agents activate the monoubiquitination of FANCD2, resulting in its targeting to nuclear foci that also contain BRCA1 and BRCA2/FANCD1, proteins involved in homology-directed DNA repair. Given the interaction of the FANC proteins with BRCA1 and BRCA2, we tested whether cells from FA patients (groups A, G, and D2) and mouse Fanca-/- cells with a targeted mutation are impaired for this repair pathway. We find that both the upstream (FANCA and FANCG) and downstream (FANCD2) FA pathway components promote homology-directed repair of chromosomal double-strand breaks (DSBs). The FANCD2 monoubiquitination site is critical for normal levels of repair, whereas the ATM phosphorylation site is not. The defect in these cells, however, is mild, differentiating them from BRCA1 and BRCA2 mutant cells. Surprisingly, we provide evidence that these proteins, like BRCA1 but unlike BRCA2, promote a second DSB repair pathway involving homology, i.e., single-strand annealing. These results suggest an early role for the FANC proteins in homologous DSB repair pathway choice.

Give Young Scientists a Break

Energy Technology Data Exchange (ETDEWEB)

Wiley, H. S.

2009-11-01

There has been much concern about the impact of tight funding on the careers of young scientists. When only a small percentage of grants are approved, even the smallest problem or error with an application can push it out of the funding range. Unfortunately, the relative lack of grant writing skills by new investigators often has this effect. To avoid a situation where only experienced investigators with polished writing skills are funded, the National Institutes of Health has instituted a more generous ranking scale for new investigators. Not surprisingly, some senior investigators have protested, calling it reverse discrimination. I say that their anger is misplaced. New investigators do deserve a break.

Mammalian DNA single-strand break repair: an X-ra(y)ted affair.

Science.gov (United States)

Caldecott, K W

2001-05-01

The genetic stability of living cells is continuously threatened by the presence of endogenous reactive oxygen species and other genotoxic molecules. Of particular threat are the thousands of DNA single-strand breaks that arise in each cell, each day, both directly from disintegration of damaged sugars and indirectly from the excision repair of damaged bases. If un-repaired, single-strand breaks can be converted into double-strand breaks during DNA replication, potentially resulting in chromosomal rearrangement and genetic deletion. Consequently, cells have adopted multiple pathways to ensure the rapid and efficient removal of single-strand breaks. A general feature of these pathways appears to be the extensive employment of protein-protein interactions to stimulate both the individual component steps and the overall repair reaction. Our current understanding of DNA single-strand break repair is discussed, and testable models for the architectural coordination of this important process are presented. Copyright 2001 John Wiley & Sons, Inc.

PIV measurements of velocities and accelerations under breaking waves on a slope

DEFF Research Database (Denmark)

Vested, Malene Hovgaard; Carstensen, Stefan; Christensen, Erik Damgaard

2017-01-01

waves. In this study, we have investigated the wave kinematics under steep and breaking waves on a laboratory beach with a slope of 1/25. The velocity field was measured by use of Particle Image Velocimetry (PIV) at a sample rate of 96Hz. The high sample rate allowed for the accelerations...... to be determined directly from the sampled velocities. It was found that both velocities and accelerations differ from the ones predicted from common wave theories such as streamfunction theory. This was especially evident at the top part of the wave close to the surface. This was not surprising, since...... the breaking event is a highly non-linear process. The results presented here may facilitate computations of the impact force on offshore structures and furthermore be used for validation of CFD models while altogether shedding light on the mechanisms behind breaking waves....

Some Surprising Introductory Physics Facts and Numbers

Science.gov (United States)

Mallmann, A. James

2016-01-01

In the entertainment world, people usually like, and find memorable, novels, short stories, and movies with surprise endings. This suggests that classroom teachers might want to present to their students examples of surprising facts associated with principles of physics. Possible benefits of finding surprising facts about principles of physics are…

Climate Change as a Predictable Surprise

International Nuclear Information System (INIS)

Bazerman, M.H.

2006-01-01

In this article, I analyze climate change as a 'predictable surprise', an event that leads an organization or nation to react with surprise, despite the fact that the information necessary to anticipate the event and its consequences was available (Bazerman and Watkins, 2004). I then assess the cognitive, organizational, and political reasons why society fails to implement wise strategies to prevent predictable surprises generally and climate change specifically. Finally, I conclude with an outline of a set of response strategies to overcome barriers to change

Opposing roles of RNF8/RNF168 and deubiquitinating enzymes in ubiquitination-dependent DNA double-strand break response signaling and DNA-repair pathway choice

International Nuclear Information System (INIS)

Nakada, Shinichiro

2016-01-01

The E3 ubiquitin ligases ring finger protein (RNF) 8 and RNF168 transduce the DNA double-strand break (DSB) response (DDR) signal by ubiquitinating DSB sites. The depletion of RNF8 or RNF168 suppresses the accumulation of DNA-repair regulating factors such as 53BP1 and RAP80 at DSB sites, suggesting roles for RNF8- and RNF168-mediated ubiquitination in DSB repair. This mini-review provides a brief overview of the RNF8- and RNF168-dependent DDR-signaling and DNA-repair pathways. The choice of DNA-repair pathway when RNF8- and RNF168-mediated ubiquitination-dependent DDR signaling is negatively regulated by deubiquitinating enzymes (DUBs) is reviewed to clarify how the opposing roles of RNF8/RNF168 and DUBs regulate ubiquitination-dependent DDR signaling and the choice of DNA-repair pathway

A toolkit for detecting technical surprise.

Energy Technology Data Exchange (ETDEWEB)

Trahan, Michael Wayne; Foehse, Mark C.

2010-10-01

The detection of a scientific or technological surprise within a secretive country or institute is very difficult. The ability to detect such surprises would allow analysts to identify the capabilities that could be a military or economic threat to national security. Sandia's current approach utilizing ThreatView has been successful in revealing potential technological surprises. However, as data sets become larger, it becomes critical to use algorithms as filters along with the visualization environments. Our two-year LDRD had two primary goals. First, we developed a tool, a Self-Organizing Map (SOM), to extend ThreatView and improve our understanding of the issues involved in working with textual data sets. Second, we developed a toolkit for detecting indicators of technical surprise in textual data sets. Our toolkit has been successfully used to perform technology assessments for the Science & Technology Intelligence (S&TI) program.

Induction and repair of DNA double strand breaks: The increasing spectrum of non-homologous end joining pathways

International Nuclear Information System (INIS)

Mladenov, Emil; Iliakis, George

2011-01-01

A defining characteristic of damage induced in the DNA by ionizing radiation (IR) is its clustered character that leads to the formation of complex lesions challenging the cellular repair mechanisms. The most widely investigated such complex lesion is the DNA double strand break (DSB). DSBs undermine chromatin stability and challenge the repair machinery because an intact template strand is lacking to assist restoration of integrity and sequence in the DNA molecule. Therefore, cells have evolved a sophisticated machinery to detect DSBs and coordinate a response on the basis of inputs from various sources. A central function of cellular responses to DSBs is the coordination of DSB repair. Two conceptually different mechanisms can in principle remove DSBs from the genome of cells of higher eukaryotes. Homologous recombination repair (HRR) uses as template a homologous DNA molecule and is therefore error-free; it functions preferentially in the S and G2 phases. Non-homologous end joining (NHEJ), on the other hand, simply restores DNA integrity by joining the two ends, is error prone as sequence is only fortuitously preserved and active throughout the cell cycle. The basis of DSB repair pathway choice remains unknown, but cells of higher eukaryotes appear programmed to utilize preferentially NHEJ. Recent work suggests that when the canonical DNA-PK dependent pathway of NHEJ (D-NHEJ), becomes compromised an alternative NHEJ pathway and not HRR substitutes in a quasi-backup function (B-NHEJ). Here, we outline aspects of DSB induction by IR and review the mechanisms of their processing in cells of higher eukaryotes. We place particular emphasis on backup pathways of NHEJ and summarize their increasing significance in various cellular processes, as well as their potential contribution to carcinogenesis.

Corrugator Activity Confirms Immediate Negative Affect in Surprise

Directory of Open Access Journals (Sweden)

Sascha eTopolinski

2015-02-01

Full Text Available The emotion of surprise entails a complex of immediate responses, such as cognitive interruption, attention allocation to, and more systematic processing of the surprising stimulus. All these processes serve the ultimate function to increase processing depth and thus cognitively master the surprising stimulus. The present account introduces phasic negative affect as the underlying mechanism responsible for these consequences. Surprising stimuli are schema-discrepant and thus entail cognitive disfluency, which elicits immediate negative affect. This affect in turn works like a phasic cognitive tuning switching the current processing mode from more automatic and heuristic to more systematic and reflective processing. Directly testing the initial elicitation of negative affect by suprising events, the present experiment presented high and low surprising neutral trivia statements to N = 28 participants while assessing their spontaneous facial expressions via facial electromyography. High compared to low suprising trivia elicited higher corrugator activity, indicative of negative affect and mental effort, while leaving zygomaticus (positive affect and frontalis (cultural surprise expression activity unaffected. Future research shall investigate the mediating role of negative affect in eliciting surprise-related outcomes.

The Influence of Negative Surprise on Hedonic Adaptation

Directory of Open Access Journals (Sweden)

Ana Paula Kieling

2016-01-01

Full Text Available After some time using a product or service, the consumer tends to feel less pleasure with consumption. This reduction of pleasure is known as hedonic adaptation. One of the emotions that interfere in this process is surprise. Based on two experiments, we suggest that negative surprise – differently to positive – influences with the level of pleasure foreseen and experienced by the consumer. Study 1 analyzes the influence of negative (vs. positive surprise on the consumer’s post-purchase hedonic adaptation expectation. Results showed that negative surprise influences the intensity of adaptation, augmenting its strength. Study 2 verifies the influence of negative (vs positive surprise over hedonic adaptation. The findings suggested that negative surprise makes adaptation happen more intensively and faster as time goes by, which brings consequences to companies and consumers in the post-purchase process, such as satisfaction and loyalty.

The transcription fidelity factor GreA impedes DNA break repair.

Science.gov (United States)

Sivaramakrishnan, Priya; Sepúlveda, Leonardo A; Halliday, Jennifer A; Liu, Jingjing; Núñez, María Angélica Bravo; Golding, Ido; Rosenberg, Susan M; Herman, Christophe

2017-10-12

Homologous recombination repairs DNA double-strand breaks and must function even on actively transcribed DNA. Because break repair prevents chromosome loss, the completion of repair is expected to outweigh the transcription of broken templates. However, the interplay between DNA break repair and transcription processivity is unclear. Here we show that the transcription factor GreA inhibits break repair in Escherichia coli. GreA restarts backtracked RNA polymerase and hence promotes transcription fidelity. We report that removal of GreA results in markedly enhanced break repair via the classic RecBCD-RecA pathway. Using a deep-sequencing method to measure chromosomal exonucleolytic degradation, we demonstrate that the absence of GreA limits RecBCD-mediated resection. Our findings suggest that increased RNA polymerase backtracking promotes break repair by instigating RecA loading by RecBCD, without the influence of canonical Chi signals. The idea that backtracked RNA polymerase can stimulate recombination presents a DNA transaction conundrum: a transcription fidelity factor that compromises genomic integrity.

Surprise: a belief or an emotion?

Science.gov (United States)

Mellers, Barbara; Fincher, Katrina; Drummond, Caitlin; Bigony, Michelle

2013-01-01

Surprise is a fundamental link between cognition and emotion. It is shaped by cognitive assessments of likelihood, intuition, and superstition, and it in turn shapes hedonic experiences. We examine this connection between cognition and emotion and offer an explanation called decision affect theory. Our theory predicts the affective consequences of mistaken beliefs, such as overconfidence and hindsight. It provides insight about why the pleasure of a gain can loom larger than the pain of a comparable loss. Finally, it explains cross-cultural differences in emotional reactions to surprising events. By changing the nature of the unexpected (from chance to good luck), one can alter the emotional reaction to surprising events. Copyright © 2013 Elsevier B.V. All rights reserved.

Mind the Gap: Women in STEM Career Breaks

Directory of Open Access Journals (Sweden)

Catherine Mavriplis

2010-03-01

Full Text Available There are two issues related to women and pathways to STEM careers. Recruitment to the field is one aspect. The second issue is the retention of women in STEM fields. This paper reports on the structured interviews with 14 women who have taken career breaks sometime after receiving their PhD in order to understand the pressures in place to take such breaks, how women remain connected (or not to their field during the break and issues related to re-entering the field after a career break. Suggestions based on the interviews include enhancements for women’s preparation for STEM fields and changes to the STEM culture itself. We suggest the inclusion workshops to detail what they might expect in their career and a provision for networking opportunities. We urge changes in the fee structure for society membership, differences in how resumes are reviewed as well as changes in maternity and child care leave.

Exploring the concept of climate surprises. A review of the literature on the concept of surprise and how it is related to climate change

International Nuclear Information System (INIS)

Glantz, M.H.; Moore, C.M.; Streets, D.G.; Bhatti, N.; Rosa, C.H.

1998-01-01

This report examines the concept of climate surprise and its implications for environmental policymaking. Although most integrated assessment models of climate change deal with average values of change, it is usually the extreme events or surprises that cause the most damage to human health and property. Current models do not help the policymaker decide how to deal with climate surprises. This report examines the literature of surprise in many aspects of human society: psychology, military, health care, humor, agriculture, etc. It draws together various ways to consider the concept of surprise and examines different taxonomies of surprise that have been proposed. In many ways, surprise is revealed to be a subjective concept, triggered by such factors as prior experience, belief system, and level of education. How policymakers have reacted to specific instances of climate change or climate surprise in the past is considered, particularly with regard to the choices they made between proactive and reactive measures. Finally, the report discusses techniques used in the current generation of assessment models and makes suggestions as to how climate surprises might be included in future models. The report concludes that some kinds of surprises are simply unpredictable, but there are several types that could in some way be anticipated and assessed, and their negative effects forestalled

Exploring the concept of climate surprises. A review of the literature on the concept of surprise and how it is related to climate change

Energy Technology Data Exchange (ETDEWEB)

Glantz, M.H.; Moore, C.M. [National Center for Atmospheric Research, Boulder, CO (United States); Streets, D.G.; Bhatti, N.; Rosa, C.H. [Argonne National Lab., IL (United States). Decision and Information Sciences Div.; Stewart, T.R. [State Univ. of New York, Albany, NY (United States)

1998-01-01

This report examines the concept of climate surprise and its implications for environmental policymaking. Although most integrated assessment models of climate change deal with average values of change, it is usually the extreme events or surprises that cause the most damage to human health and property. Current models do not help the policymaker decide how to deal with climate surprises. This report examines the literature of surprise in many aspects of human society: psychology, military, health care, humor, agriculture, etc. It draws together various ways to consider the concept of surprise and examines different taxonomies of surprise that have been proposed. In many ways, surprise is revealed to be a subjective concept, triggered by such factors as prior experience, belief system, and level of education. How policymakers have reacted to specific instances of climate change or climate surprise in the past is considered, particularly with regard to the choices they made between proactive and reactive measures. Finally, the report discusses techniques used in the current generation of assessment models and makes suggestions as to how climate surprises might be included in future models. The report concludes that some kinds of surprises are simply unpredictable, but there are several types that could in some way be anticipated and assessed, and their negative effects forestalled.

The role of surprise in satisfaction judgements

NARCIS (Netherlands)

Vanhamme, J.; Snelders, H.M.J.J.

2001-01-01

Empirical findings suggest that surprise plays an important role in consumer satisfaction, but there is a lack of theory to explain why this is so. The present paper provides explanations for the process through which positive (negative) surprise might enhance (reduce) consumer satisfaction. First,

A Role for BLM in Double-Strand Break Repair Pathway Choice: Prevention of CtIP/Mre11-Mediated Alternative Nonhomologous End-Joining

DEFF Research Database (Denmark)

Grabarz, Anastazja; Guirouilh-Barbat, Josée; Barascu, Aurelia

2013-01-01

The choice of the appropriate double-strand break (DSB) repair pathway is essential for the maintenance of genomic stability. Here, we show that the Bloom syndrome gene product, BLM, counteracts CtIP/MRE11-dependent long-range deletions (>200 bp) generated by alternative end-joining (A-EJ). BLM...... represses A-EJ in an epistatic manner with 53BP1 and RIF1 and is required for ionizing-radiation-induced 53BP1 focus assembly. Conversely, in the absence of 53BP1 or RIF1, BLM promotes formation of A-EJ long deletions, consistent with a role for BLM in DSB end resection. These data highlight a dual role...... for BLM that influences the DSB repair pathway choice: (1) protection against CtIP/MRE11 long-range deletions associated with A-EJ and (2) promotion of DNA resection. These antagonist roles can be regulated, according to cell-cycle stage, by interacting partners such as 53BP1 and TopIII, to avoid...

DNA breaks and repair in interstitial telomere sequences: Influence of chromatin structure

International Nuclear Information System (INIS)

Revaud, D.

2009-06-01

Interstitial Telomeric Sequences (ITS) are over-involved in spontaneous and radiationinduced chromosome aberrations in chinese hamster cells. We have performed a study to investigate the origin of their instability, spontaneously or after low doses irradiation. Our results demonstrate that ITS have a particular chromatin structure: short nucleotide repeat length, less compaction of the 30 nm chromatin fiber, presence of G-quadruplex structures. These features would modulate breaks production and would favour the recruitment of alternative DNA repair mechanisms, which are prone to produce chromosome aberrations. These pathways could be at the origin of chromosome aberrations in ITS whereas NHEJ and HR Double Strand Break repair pathways are rather required for a correct repair in these regions. (author)

Two pathways of DNA double-strand break repair in G1 cells of Saccharomyces cerevisiae

International Nuclear Information System (INIS)

Glazunov, A.V.

1988-01-01

The G1 cells of the diploid yeast Saccharomyces cerevislae are known to be capable of a slow repair of DNA double-strand breaks (DSB) during holding the cells in a non-nutrient medium. In the present paper, it has been shown that S. cerevislae cells γ-irradiated in the G1 phase of cell cycle are capable of fast repair of DNA DSB; this process is completed within 30-40 min of holding the cells in water at 28 deg C. For this reason, the kinetics of DNA DSB repair during holding the cells in a non-nutrient medium are biphasic, i.e., the first, ''fast'' phase is completed within 30-40 min; wheras the second, ''slow'' one, within 48 h. Mutations rad51, rad52, rad54 and rad55 inhibit the fast repair of DNA DSB, whereas mutations rad50, rad53 and rad57 do not practically influence this process. It has been shown that the observed fast and slow repair of DNA DSB in the G1 diploid cells of S, cerevislae are separate pathways of DNA DSB repair in yeast

Double Strand Break Repair, one mechanism can hide another: Alternative non-homologous end joining

International Nuclear Information System (INIS)

Rass, E.; Grabarz, A.; Bertrand, P.; Lopez, B.S.

2012-01-01

DNA double strand breaks are major cytotoxic lesions encountered by the cells. They can be induced by ionizing radiation or endogenous stress and can lead to genetic instability. Two mechanisms compete for the repair of DNA double strand breaks: homologous recombination and non-homologous end joining (NHEJ). Homologous recombination requires DNA sequences homology and is initiated by single strand resection. Recently, advances have been made concerning the major steps and proteins involved in resection. NHEJ, in contrast, does not require sequence homology. The existence of a DNA double strand break repair mechanism, independent of KU and ligase IV, the key proteins of the canonical non homologous end joining pathway, has been revealed lately and named alternative non homologous end joining. The hallmarks of this highly mutagenic pathway are deletions at repair junctions and frequent use of distal micro-homologies. This mechanism is also initiated by a single strand resection of the break. The aim of this review is firstly to present recent data on single strand resection, and secondly the alternative NHEJ pathway, including a discussion on the fidelity of NHEJ. Based on current knowledge, canonical NHEJ does not appear as an intrinsically mutagenic mechanism, but in contrast, as a conservative one. The structure of broken DNA ends actually dictates the quality repair of the alternative NHEJ and seems the actual responsible for the mutagenesis attributed beforehand to the canonical NHEJ. The existence of this novel DNA double strand breaks repair mechanism needs to be taken into account in the development of radiosensitizing strategies in order to optimise the efficiency of radiotherapy. (authors)

A Dichotomic Analysis of the Surprise Examination Paradox

OpenAIRE

Franceschi, Paul

2002-01-01

This paper presents a dichotomic analysis of the surprise examination paradox. In section 1, I analyse the surprise notion in detail. I introduce then in section 2, the distinction between a monist and dichotomic analysis of the paradox. I also present there a dichotomy leading to distinguish two basically and structurally different versions of the paradox, respectively based on a conjoint and a disjoint definition of the surprise. In section 3, I describe the solution to SEP corresponding to...

Exploration, Novelty, Surprise and Free Energy Minimisation

Directory of Open Access Journals (Sweden)

Philipp eSchwartenbeck

2013-10-01

Full Text Available This paper reviews recent developments under the free energy principle that introduce a normative perspective on classical economic (utilitarian decision-making based on (active Bayesian inference. It has been suggested that the free energy principle precludes novelty and complexity, because it assumes that biological systems – like ourselves - try to minimise the long-term average of surprise to maintain their homeostasis. However, recent formulations show that minimising surprise leads naturally to concepts such as exploration and novelty bonuses. In this approach, agents infer a policy that minimises surprise by minimising the difference (or relative entropy between likely and desired outcomes, which involves both pursuing the goal-state that has the highest expected utility (often termed ‘exploitation’ and visiting a number of different goal-states (‘exploration’. Crucially, the opportunity to visit new states increases the value of the current state. Casting decision-making problems within a variational framework, therefore, predicts that our behaviour is governed by both the entropy and expected utility of future states. This dissolves any dialectic between minimising surprise and exploration or novelty seeking.

Double-Strand DNA Break Repair in Mycobacteria.

Science.gov (United States)

Glickman, Michael S

2014-10-01

Discontinuity of both strands of the chromosome is a lethal event in all living organisms because it compromises chromosome replication. As such, a diversity of DNA repair systems has evolved to repair double-strand DNA breaks (DSBs). In part, this diversity of DSB repair systems has evolved to repair breaks that arise in diverse physiologic circumstances or sequence contexts, including cellular states of nonreplication or breaks that arise between repeats. Mycobacteria elaborate a set of three genetically distinct DNA repair pathways: homologous recombination, nonhomologous end joining, and single-strand annealing. As such, mycobacterial DSB repair diverges substantially from the standard model of prokaryotic DSB repair and represents an attractive new model system. In addition, the presence in mycobacteria of a DSB repair system that can repair DSBs in nonreplicating cells (nonhomologous end joining) or when DSBs arise between repeats (single-strand annealing) has clear potential relevance to Mycobacterium tuberculosis pathogenesis, although the exact role of these systems in M. tuberculosis pathogenesis is still being elucidated. In this article we will review the genetics of mycobacterial DSB repair systems, focusing on recent insights.

The DNA translocase RAD5A acts independently of the other main DNA repair pathways, and requires both its ATPase and RING domain for activity in Arabidopsis thaliana.

Science.gov (United States)

Klemm, Tobias; Mannuß, Anja; Kobbe, Daniela; Knoll, Alexander; Trapp, Oliver; Dorn, Annika; Puchta, Holger

2017-08-01

Multiple pathways exist to repair DNA damage induced by methylating and crosslinking agents in Arabidopsis thaliana. The SWI2/SNF2 translocase RAD5A, the functional homolog of budding yeast Rad5 that is required for the error-free branch of post-replicative repair, plays a surprisingly prominent role in the repair of both kinds of lesions in Arabidopsis. Here we show that both the ATPase domain and the ubiquitination function of the RING domain of the Arabidopsis protein are essential for the cellular response to different forms of DNA damage. To define the exact role of RAD5A within the complex network of DNA repair pathways, we crossed the rad5a mutant line with mutants of different known repair factors of Arabidopsis. We had previously shown that RAD5A acts independently of two main pathways of replication-associated DNA repair defined by the helicase RECQ4A and the endonuclease MUS81. The enhanced sensitivity of all double mutants tested in this study indicates that the repair of damaged DNA by RAD5A also occurs independently of nucleotide excision repair (AtRAD1), single-strand break repair (AtPARP1), as well as microhomology-mediated double-strand break repair (AtTEB). Moreover, RAD5A can partially complement for a deficient AtATM-mediated DNA damage response in plants, as the double mutant shows phenotypic growth defects. © 2017 The Authors The Plant Journal © 2017 John Wiley & Sons Ltd.

The Human L1 Element Causes DNA Double-Strand Breaks in Breast Cancer

Science.gov (United States)

2006-08-01

cancer is complex. However, defects in DNA repair genes in the double-strand break repair pathway are cancer predisposing. My lab has characterized...a new potentially important source of double-strand breaks (DSBs) in human cells and are interested in characterizing which DNA repair genes act on...this particular source of DNA damage. Selfish DNA accounts for 45% of the human genome. We have recently demonstrated that one particular selfish

Consistency of Trend Break Point Estimator with Underspecified Break Number

Directory of Open Access Journals (Sweden)

Jingjing Yang

2017-01-01

Full Text Available This paper discusses the consistency of trend break point estimators when the number of breaks is underspecified. The consistency of break point estimators in a simple location model with level shifts has been well documented by researchers under various settings, including extensions such as allowing a time trend in the model. Despite the consistency of break point estimators of level shifts, there are few papers on the consistency of trend shift break point estimators in the presence of an underspecified break number. The simulation study and asymptotic analysis in this paper show that the trend shift break point estimator does not converge to the true break points when the break number is underspecified. In the case of two trend shifts, the inconsistency problem worsens if the magnitudes of the breaks are similar and the breaks are either both positive or both negative. The limiting distribution for the trend break point estimator is developed and closely approximates the finite sample performance.

Visualization of DNA double-strand break repair: From molecules to cells

NARCIS (Netherlands)

Krawczyk, Przemek M.; Stap, Jan; Aten, Jacob A.

2008-01-01

DNA double-strand break (DSB) signaling and repair processes are positioned at the crossroad of nuclear pathways that regulate DNA replication, cell division, senescence and apoptosis. Importantly, errors in DSB repair may lead to lethal or potentially tumorigenic chromosome rearrangements.

A Contrast-Based Computational Model of Surprise and Its Applications.

Science.gov (United States)

Macedo, Luis; Cardoso, Amílcar

2017-11-19

We review our work on a contrast-based computational model of surprise and its applications. The review is contextualized within related research from psychology, philosophy, and particularly artificial intelligence. Influenced by psychological theories of surprise, the model assumes that surprise-eliciting events initiate a series of cognitive processes that begin with the appraisal of the event as unexpected, continue with the interruption of ongoing activity and the focusing of attention on the unexpected event, and culminate in the analysis and evaluation of the event and the revision of beliefs. It is assumed that the intensity of surprise elicited by an event is a nonlinear function of the difference or contrast between the subjective probability of the event and that of the most probable alternative event (which is usually the expected event); and that the agent's behavior is partly controlled by actual and anticipated surprise. We describe applications of artificial agents that incorporate the proposed surprise model in three domains: the exploration of unknown environments, creativity, and intelligent transportation systems. These applications demonstrate the importance of surprise for decision making, active learning, creative reasoning, and selective attention. Copyright © 2017 Cognitive Science Society, Inc.

The Role of Surprise in Game-Based Learning for Mathematics

NARCIS (Netherlands)

Wouters, Pieter; van Oostendorp, Herre; ter Vrugte, Judith; Vandercruysse, Sylke; de Jong, Anthonius J.M.; Elen, Jan; De Gloria, Alessandro; Veltkamp, Remco

2016-01-01

In this paper we investigate the potential of surprise on learning with prevocational students in the domain of proportional reasoning. Surprise involves an emotional reaction, but it also serves a cognitive goal as it directs attention to explain why the surprising event occurred and to learn for

Unification of SUSY breaking and GUT breaking

Energy Technology Data Exchange (ETDEWEB)

Kobayashi, Tatsuo [Department of Physics, Hokkaido University,Sapporo 060-0810 (Japan); Omura, Yuji [Department of Physics, Nagoya University,Nagoya 464-8602 (Japan)

2015-02-18

We build explicit supersymmetric unification models where grand unified gauge symmetry breaking and supersymmetry (SUSY) breaking are caused by the same sector. Besides, the SM-charged particles are also predicted by the symmetry breaking sector, and they give the soft SUSY breaking terms through the so-called gauge mediation. We investigate the mass spectrums in an explicit model with SU(5) and additional gauge groups, and discuss its phenomenological aspects. Especially, nonzero A-term and B-term are generated at one-loop level according to the mediation via the vector superfields, so that the electro-weak symmetry breaking and 125 GeV Higgs mass may be achieved by the large B-term and A-term even if the stop mass is around 1 TeV.

Complex DNA repair pathways as possible therapeutic targets to overcome temozolomide resistance in glioblastoma

International Nuclear Information System (INIS)

Yoshimoto, Koji; Mizoguchi, Masahiro; Hata, Nobuhiro; Murata, Hideki; Hatae, Ryusuke; Amano, Toshiyuki; Nakamizo, Akira; Sasaki, Tomio

2012-01-01

Many conventional chemotherapeutic drugs exert their cytotoxic function by inducing DNA damage in the tumor cell. Therefore, a cell-inherent DNA repair pathway, which reverses the DNA-damaging effect of the cytotoxic drugs, can mediate therapeutic resistance to chemotherapy. The monofunctional DNA-alkylating agent temozolomide (TMZ) is a commonly used chemotherapeutic drug and the gold standard treatment for glioblastoma (GBM). Although the activity of DNA repair protein O6-methylguanine-DNA methyltransferase (MGMT) has been described as the main modulator to determine the sensitivity of GBM to TMZ, a subset of GBM does not respond despite MGMT inactivation, suggesting that another DNA repair mechanism may also modulate the tolerance to TMZ. Considerable interest has focused on MGMT, mismatch repair (MMR), and the base excision repair (BER) pathway in the mechanism of mediating TMZ resistance, but emerging roles for the DNA strand-break repair pathway have been demonstrated. In the first part of this review article, we briefly review the significant role of MGMT, MMR, and the BER pathway in the tolerance to TMZ; in the last part, we review the recent publications that demonstrate possible roles of DNA strand-break repair pathways, such as single-strand break repair and double-strand break repair, as well as the Fanconi anemia pathway in the repair process after alkylating agent-based therapy. It is possible that all of these repair pathways have a potential to modulate the sensitivity to TMZ and aid in overcoming the therapeutic resistance in the clinic.

Complex DNA repair pathways as possible therapeutic targets to overcome temozolomide resistance in glioblastoma

Energy Technology Data Exchange (ETDEWEB)

Yoshimoto, Koji; Mizoguchi, Masahiro; Hata, Nobuhiro; Murata, Hideki; Hatae, Ryusuke; Amano, Toshiyuki; Nakamizo, Akira; Sasaki, Tomio, E-mail: kyoshimo@ns.med.kyushu-u.ac.jp [Department of Neurosurgery, Graduate School of Medical Sciences, Kyushu University, Fukuoka (Japan)

2012-12-05

Many conventional chemotherapeutic drugs exert their cytotoxic function by inducing DNA damage in the tumor cell. Therefore, a cell-inherent DNA repair pathway, which reverses the DNA-damaging effect of the cytotoxic drugs, can mediate therapeutic resistance to chemotherapy. The monofunctional DNA-alkylating agent temozolomide (TMZ) is a commonly used chemotherapeutic drug and the gold standard treatment for glioblastoma (GBM). Although the activity of DNA repair protein O6-methylguanine-DNA methyltransferase (MGMT) has been described as the main modulator to determine the sensitivity of GBM to TMZ, a subset of GBM does not respond despite MGMT inactivation, suggesting that another DNA repair mechanism may also modulate the tolerance to TMZ. Considerable interest has focused on MGMT, mismatch repair (MMR), and the base excision repair (BER) pathway in the mechanism of mediating TMZ resistance, but emerging roles for the DNA strand-break repair pathway have been demonstrated. In the first part of this review article, we briefly review the significant role of MGMT, MMR, and the BER pathway in the tolerance to TMZ; in the last part, we review the recent publications that demonstrate possible roles of DNA strand-break repair pathways, such as single-strand break repair and double-strand break repair, as well as the Fanconi anemia pathway in the repair process after alkylating agent-based therapy. It is possible that all of these repair pathways have a potential to modulate the sensitivity to TMZ and aid in overcoming the therapeutic resistance in the clinic.

Forging New Pathways: The Impact of the Breaking through Initiative in Michigan

Science.gov (United States)

Schanker, Jennifer B.; Taylor, Judith C.

2012-01-01

The Michigan Center for Student Success commissioned this study to determine whether strategies employed to improve adult students' success at 41 Breaking Through colleges nationwide have taken root at Michigan's original colleges and spread beyond them. A statewide survey revisited four of the colleges profiled in previous publications, and the…

A Neural Mechanism for Surprise-related Interruptions of Visuospatial Working Memory.

Science.gov (United States)

Wessel, Jan R

2018-01-01

Surprising perceptual events recruit a fronto-basal ganglia mechanism for inhibition, which suppresses motor activity following surprise. A recent study found that this inhibitory mechanism also disrupts the maintenance of verbal working memory (WM) after surprising tones. However, it is unclear whether this same mechanism also relates to surprise-related interruptions of non-verbal WM. We tested this hypothesis using a change-detection task, in which surprising tones impaired visuospatial WM. Participants also performed a stop-signal task (SST). We used independent component analysis and single-trial scalp-electroencephalogram to test whether the same inhibitory mechanism that reflects motor inhibition in the SST relates to surprise-related visuospatial WM decrements, as was the case for verbal WM. As expected, surprising tones elicited activity of the inhibitory mechanism, and this activity correlated strongly with the trial-by-trial level of surprise. However, unlike for verbal WM, the activity of this mechanism was unrelated to visuospatial WM accuracy. Instead, inhibition-independent activity that immediately succeeded the inhibitory mechanism was increased when visuospatial WM was disrupted. This shows that surprise-related interruptions of visuospatial WM are not effected by the same inhibitory mechanism that interrupts verbal WM, and instead provides evidence for a 2-stage model of distraction. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

Human amygdala response to dynamic facial expressions of positive and negative surprise.

Science.gov (United States)

Vrticka, Pascal; Lordier, Lara; Bediou, Benoît; Sander, David

2014-02-01

Although brain imaging evidence accumulates to suggest that the amygdala plays a key role in the processing of novel stimuli, only little is known about its role in processing expressed novelty conveyed by surprised faces, and even less about possible interactive encoding of novelty and valence. Those investigations that have already probed human amygdala involvement in the processing of surprised facial expressions either used static pictures displaying negative surprise (as contained in fear) or "neutral" surprise, and manipulated valence by contextually priming or subjectively associating static surprise with either negative or positive information. Therefore, it still remains unresolved how the human amygdala differentially processes dynamic surprised facial expressions displaying either positive or negative surprise. Here, we created new artificial dynamic 3-dimensional facial expressions conveying surprise with an intrinsic positive (wonderment) or negative (fear) connotation, but also intrinsic positive (joy) or negative (anxiety) emotions not containing any surprise, in addition to neutral facial displays either containing ("typical surprise" expression) or not containing ("neutral") surprise. Results showed heightened amygdala activity to faces containing positive (vs. negative) surprise, which may either correspond to a specific wonderment effect as such, or to the computation of a negative expected value prediction error. Findings are discussed in the light of data obtained from a closely matched nonsocial lottery task, which revealed overlapping activity within the left amygdala to unexpected positive outcomes. PsycINFO Database Record (c) 2014 APA, all rights reserved.

The Value of Surprising Findings for Research on Marketing

OpenAIRE

JS Armstrong

2004-01-01

In the work of Armstrong (Journal of Business Research, 2002), I examined empirical research on the scientific process and related these to marketing science. The findings of some studies were surprising. In this reply, I address surprising findings and other issues raised by commentators.

An efficient community detection algorithm using greedy surprise maximization

International Nuclear Information System (INIS)

Jiang, Yawen; Jia, Caiyan; Yu, Jian

2014-01-01

Community detection is an important and crucial problem in complex network analysis. Although classical modularity function optimization approaches are widely used for identifying communities, the modularity function (Q) suffers from its resolution limit. Recently, the surprise function (S) was experimentally proved to be better than the Q function. However, up until now, there has been no algorithm available to perform searches to directly determine the maximal surprise values. In this paper, considering the superiority of the S function over the Q function, we propose an efficient community detection algorithm called AGSO (algorithm based on greedy surprise optimization) and its improved version FAGSO (fast-AGSO), which are based on greedy surprise optimization and do not suffer from the resolution limit. In addition, (F)AGSO does not need the number of communities K to be specified in advance. Tests on experimental networks show that (F)AGSO is able to detect optimal partitions in both simple and even more complex networks. Moreover, algorithms based on surprise maximization perform better than those algorithms based on modularity maximization, including Blondel–Guillaume–Lambiotte–Lefebvre (BGLL), Clauset–Newman–Moore (CNM) and the other state-of-the-art algorithms such as Infomap, order statistics local optimization method (OSLOM) and label propagation algorithm (LPA). (paper)

Radar Design to Protect Against Surprise

Energy Technology Data Exchange (ETDEWEB)

Doerry, Armin W. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)

2015-02-01

Technological and doctrinal surprise is about rendering preparations for conflict as irrelevant or ineffective . For a sensor, this means essentially rendering the sensor as irrelevant or ineffective in its ability to help determine truth. Recovery from this sort of surprise is facilitated by flexibility in our own technology and doctrine. For a sensor, this mean s flexibility in its architecture, design, tactics, and the designing organizations ' processes. - 4 - Acknowledgements This report is the result of a n unfunded research and development activity . Sandia National Laboratories is a multi - program laboratory manage d and operated by Sandia Corporation, a wholly owned subsidiary of Lockheed Martin Corporation, for the U.S. Department of Energy's National Nuclear Security Administration under contract DE - AC04 - 94AL85000.

Physical and biological parameters affecting DNA double strand break misrejoining in mammalian cells

International Nuclear Information System (INIS)

Kuehne, M.; Rothkamm, K.; Loebrich, M.

2002-01-01

In an attempt to investigate the effect of radiation quality, dose and specific repair pathways on correct and erroneous rejoining of DNA double strand breaks (DSBs), an assay was applied that allows the identification and quantification of incorrectly rejoined DSB ends produced by ionising radiation. While substantial misrejoining occurs in mammalian cells after high acute irradiation doses, decreasing misrejoining frequencies were observed in dose fractionation experiments with X rays. In line with this finding, continuous irradiation with gamma rays at low dose rate leads to non detectable misrejoining. This indicates that the probability for a DSB to be misrejoined decreases drastically when DSBs are separated in time and space. The same dose fractionation approach was applied to determine DSB misrejoining after a particle exposure. In contrast to the results with X rays, there was no significant decrease in DSB misrejoining with increasing fractionation. This suggests that DSB misrejoining after a irradiation is not significantly affected by a separation of particle tracks. To identify the enzymatic pathways that are involved in DSB misrejoining, cell lines deficient in non-homologous end-joining (NHEJ) were examined. After high X ray doses, DSB misrejoining is considerable reduced in NHEJ mutants. Low dose rate experiments show elevated DSB misrejoining in NHEJ mutants compared with wild-type cells. The authors propose that NHEJ serves as an efficient pathway for rejoining correct break ends in situations of separated breaks but generates genomic rearrangements if DSBs are close in time and space. (author)

Surprise as a design strategy

NARCIS (Netherlands)

Ludden, G.D.S.; Schifferstein, H.N.J.; Hekkert, P.P.M.

2008-01-01

Imagine yourself queuing for the cashier’s desk in a supermarket. Naturally, you have picked the wrong line, the one that does not seem to move at all. Soon, you get tired of waiting. Now, how would you feel if the cashier suddenly started to sing? Many of us would be surprised and, regardless of

Small break loss of coolant accidents: Bottom and side break

International Nuclear Information System (INIS)

Hardy, P.G.; Richter, H.J.

1987-01-01

A LOCA can be caused, e.g. by a small break in the primary cooling system. The rate of fluid escaping through such a break will define the time until the core will be uncovered. Therefore the prediction of fluid loss and pressure transient is of major importance to plan for timely action in response to such an event. Stratification of the two phases might be present upstream of the break, thus, the location of the break relative to the vapor-liquid interface and the overall upstream fluid conditions are relevant for the calculation of fluid loss. Experimental results and analyses are presented here for small breaks at the bottom or at the side of a small pressure vessel. It was found that in such a case the onset of the so-called ''vapor pull through'' is important but swelling at sufficient depressurization rates of the liquid due to flashing is also of significance. It was also discovered that in the bottom break the flow rate is strongly dependent on the break entrance quality of the vapour-liquid mixture. The side break can be treated similarly to the bottom break if the interface level is above the break. The analyses developed on the basis of experimental observations showed reasonable agreement of predicted and measured pressure transients. It was possible to calculate the changing interface level and mixture void fraction history in a way compatible with the behavior observed during the experiments. Even though the experiments were performed at low pressures, this work should help to get a better understanding of physical phenomena occurring in a full scale small break LOCA. (orig./HP)

Surprisal analysis and probability matrices for rotational energy transfer

International Nuclear Information System (INIS)

Levine, R.D.; Bernstein, R.B.; Kahana, P.; Procaccia, I.; Upchurch, E.T.

1976-01-01

The information-theoretic approach is applied to the analysis of state-to-state rotational energy transfer cross sections. The rotational surprisal is evaluated in the usual way, in terms of the deviance of the cross sections from their reference (''prior'') values. The surprisal is found to be an essentially linear function of the energy transferred. This behavior accounts for the experimentally observed exponential gap law for the hydrogen halide systems. The data base here analyzed (taken from the literature) is largely computational in origin: quantal calculations for the hydrogenic systems H 2 +H, He, Li + ; HD+He; D 2 +H and for the N 2 +Ar system; and classical trajectory results for H 2 +Li + ; D 2 +Li + and N 2 +Ar. The surprisal analysis not only serves to compact a large body of data but also aids in the interpretation of the results. A single surprisal parameter theta/subR/ suffices to account for the (relative) magnitude of all state-to-state inelastic cross sections at a given energy

Mouse RAD54 affects DNA double-strand break repair and sister chromatid exchange

NARCIS (Netherlands)

H.B. Beverloo (Berna); R.D. Johnson (Roger); M. Jasin (Maria); R. Kanaar (Roland); J.H.J. Hoeijmakers (Jan); M.L.G. Dronkert (Mies)

2000-01-01

textabstractCells can achieve error-free repair of DNA double-strand breaks (DSBs) by homologous recombination through gene conversion with or without crossover. In contrast, an alternative homology-dependent DSB repair pathway, single-strand annealing (SSA), results in deletions. In this study, we

Surprising Incentive: An Instrument for Promoting Safety Performance of Construction Employees

Directory of Open Access Journals (Sweden)

Fakhradin Ghasemi

2015-09-01

Conclusion: The results of this study proved that the surprising incentive would improve the employees' safety performance just in the short term because the surprising value of the incentives dwindle over time. For this reason and to maintain the surprising value of the incentive system, the amount and types of incentives need to be evaluated and modified annually or biannually.

REV7 counteracts DNA double-strand break resection and affects PARP inhibition

NARCIS (Netherlands)

Xu, Guotai; Chapman, J. Ross; Brandsma, Inger; Yuan, Jingsong; Mistrik, Martin; Bouwman, Peter; Bartkova, Jirina; Gogola, Ewa; Warmerdam, Daniël; Barazas, Marco; Jaspers, Janneke E.; Watanabe, Kenji; Pieterse, Mark; Kersbergen, Ariena; Sol, Wendy; Celie, Patrick H. N.; Schouten, Philip C.; van den Broek, Bram; Salman, Ahmed; Nieuwland, Marja; de Rink, Iris; de Ronde, Jorma; Jalink, Kees; Boulton, Simon J.; Chen, Junjie; van Gent, Dik C.; Bartek, Jiri; Jonkers, Jos; Borst, Piet; Rottenberg, Sven

2015-01-01

Error-free repair of DNA double-strand breaks (DSBs) is achieved by homologous recombination (HR), and BRCA1 is an important factor for this repair pathway(1). In the absence of BRCA1-mediated HR, the administration of PARP inhibitors induces synthetic lethality of tumour cells of patients with

Dividend announcements reconsidered: Dividend changes versus dividend surprises

OpenAIRE

Andres, Christian; Betzer, André; van den Bongard, Inga; Haesner, Christian; Theissen, Erik

2012-01-01

This paper reconsiders the issue of share price reactions to dividend announcements. Previous papers rely almost exclusively on a naive dividend model in which the dividend change is used as a proxy for the dividend surprise. We use the difference between the actual dividend and the analyst consensus forecast as obtained from I/B/E/S as a proxy for the dividend surprise. Using data from Germany, we find significant share price reactions after dividend announcements. Once we control for analys...

Non-homologous end joining is the responsible pathway for the repair of fludarabine-induced DNA double strand breaks in mammalian cells

International Nuclear Information System (INIS)

Campos-Nebel, Marcelo de; Larripa, Irene; Gonzalez-Cid, Marcela

2008-01-01

Fludarabine (FLU), an analogue of adenosine, interferes with DNA synthesis and inhibits the chain elongation leading to replication arrest and DNA double strand break (DSB) formation. Mammalian cells use two main pathways of DSB repair to maintain genomic stability: homologous recombination (HR) and non-homologous end joining (NHEJ). The aim of the present work was to evaluate the repair pathways employed in the restoration of DSB formed following replication arrest induced by FLU in mammalian cells. Replication inhibition was induced in human lymphocytes and fibroblasts by FLU. DSB occurred in a dose-dependent manner on early/middle S-phase cells, as detected by γH2AX foci formation. To test whether conservative HR participates in FLU-induced DSB repair, we measured the kinetics of Rad51 nuclear foci formation in human fibroblasts. There was no significant induction of Rad51 foci after FLU treatment. To further confirm these results, we analyzed the frequency of sister chromatid exchanges (SCE) in both human cells. We did not find increased frequencies of SCE after FLU treatment. To assess the participation of NHEJ pathway in the repair of FLU-induced damage, we used two chemical inhibitors of the catalytic subunit of DNA-dependent protein kinase (DNA-PKcs), vanillin and wortmannin. Human fibroblasts pretreated with DNA-PKcs inhibitors showed increased levels of chromosome breakages and became more sensitive to cell death. An active role of NHEJ pathway was also suggested from the analysis of Chinese hamster cell lines. XR-C1 (DNA-PKcs-deficient) and XR-V15B (Ku80-deficient) cells showed hypersensitivity to FLU as evidenced by the increased frequency of chromosome aberrations, decreased mitotic index and impaired survival rates. In contrast, CL-V4B (Rad51C-deficient) and V-C8 (Brca2-deficient) cell lines displayed a FLU-resistant phenotype. Together, our results suggest a major role for NHEJ repair in the preservation of genome integrity against FLU-induced DSB

Non-homologous end joining is the responsible pathway for the repair of fludarabine-induced DNA double strand breaks in mammalian cells

Energy Technology Data Exchange (ETDEWEB)

Campos-Nebel, Marcelo de [Departamento de Genetica, Instituto de Investigaciones Hematologicas Mariano R. Castex, Academia Nacional de Medicina, Buenos Aires (Argentina)], E-mail: mnebel@hematologia.anm.edu.ar; Larripa, Irene; Gonzalez-Cid, Marcela [Departamento de Genetica, Instituto de Investigaciones Hematologicas Mariano R. Castex, Academia Nacional de Medicina, Buenos Aires (Argentina)

2008-11-10

Fludarabine (FLU), an analogue of adenosine, interferes with DNA synthesis and inhibits the chain elongation leading to replication arrest and DNA double strand break (DSB) formation. Mammalian cells use two main pathways of DSB repair to maintain genomic stability: homologous recombination (HR) and non-homologous end joining (NHEJ). The aim of the present work was to evaluate the repair pathways employed in the restoration of DSB formed following replication arrest induced by FLU in mammalian cells. Replication inhibition was induced in human lymphocytes and fibroblasts by FLU. DSB occurred in a dose-dependent manner on early/middle S-phase cells, as detected by {gamma}H2AX foci formation. To test whether conservative HR participates in FLU-induced DSB repair, we measured the kinetics of Rad51 nuclear foci formation in human fibroblasts. There was no significant induction of Rad51 foci after FLU treatment. To further confirm these results, we analyzed the frequency of sister chromatid exchanges (SCE) in both human cells. We did not find increased frequencies of SCE after FLU treatment. To assess the participation of NHEJ pathway in the repair of FLU-induced damage, we used two chemical inhibitors of the catalytic subunit of DNA-dependent protein kinase (DNA-PKcs), vanillin and wortmannin. Human fibroblasts pretreated with DNA-PKcs inhibitors showed increased levels of chromosome breakages and became more sensitive to cell death. An active role of NHEJ pathway was also suggested from the analysis of Chinese hamster cell lines. XR-C1 (DNA-PKcs-deficient) and XR-V15B (Ku80-deficient) cells showed hypersensitivity to FLU as evidenced by the increased frequency of chromosome aberrations, decreased mitotic index and impaired survival rates. In contrast, CL-V4B (Rad51C-deficient) and V-C8 (Brca2-deficient) cell lines displayed a FLU-resistant phenotype. Together, our results suggest a major role for NHEJ repair in the preservation of genome integrity against FLU

Molecular Basis for DNA Double-Strand Break Annealing and Primer Extension by an NHEJ DNA Polymerase

Directory of Open Access Journals (Sweden)

Nigel C. Brissett

2013-11-01

Full Text Available Nonhomologous end-joining (NHEJ is one of the major DNA double-strand break (DSB repair pathways. The mechanisms by which breaks are competently brought together and extended during NHEJ is poorly understood. As polymerases extend DNA in a 5′-3′ direction by nucleotide addition to a primer, it is unclear how NHEJ polymerases fill in break termini containing 3′ overhangs that lack a primer strand. Here, we describe, at the molecular level, how prokaryotic NHEJ polymerases configure a primer-template substrate by annealing the 3′ overhanging strands from opposing breaks, forming a gapped intermediate that can be extended in trans. We identify structural elements that facilitate docking of the 3′ ends in the active sites of adjacent polymerases and reveal how the termini act as primers for extension of the annealed break, thus explaining how such DSBs are extended in trans. This study clarifies how polymerases couple break-synapsis to catalysis, providing a molecular mechanism to explain how primer extension is achieved on DNA breaks.

A Damage-Independent Role for 53BP1 that Impacts Break Order and Igh Architecture during Class Switch Recombination

Directory of Open Access Journals (Sweden)

Pedro P. Rocha

2016-06-01

Full Text Available During class switch recombination (CSR, B cells replace the Igh Cμ or δ exons with another downstream constant region exon (CH, altering the antibody isotype. CSR occurs through the introduction of AID-mediated double-strand breaks (DSBs in switch regions and subsequent ligation of broken ends. Here, we developed an assay to investigate the dynamics of DSB formation in individual cells. We demonstrate that the upstream switch region Sμ is first targeted during recombination and that the mechanism underlying this control relies on 53BP1. Surprisingly, regulation of break order occurs through residual binding of 53BP1 to chromatin before the introduction of damage and independent of its established role in DNA repair. Using chromosome conformation capture, we show that 53BP1 mediates changes in chromatin architecture that affect break order. Finally, our results explain how changes in Igh architecture in the absence of 53BP1 could promote inversional rearrangements that compromise CSR.

Charming surprise

CERN Multimedia

Antonella Del Rosso

2011-01-01

The CP violation in charm quarks has always been thought to be extremely small. So, looking at particle decays involving matter and antimatter, the LHCb experiment has recently been surprised to observe that things might be different. Theorists are on the case.   The study of the physics of the charm quark was not in the initial plans of the LHCb experiment, whose letter “b” stands for “beauty quark”. However, already one year ago, the Collaboration decided to look into a wider spectrum of processes that involve charm quarks among other things. The LHCb trigger allows a lot of these processes to be selected, and, among them, one has recently shown interesting features. Other experiments at b-factories have already performed the same measurement but this is the first time that it has been possible to achieve such high precision, thanks to the huge amount of data provided by the very high luminosity of the LHC. “We have observed the decay modes of t...

Breaking Bat

Science.gov (United States)

Aguilar, Isaac-Cesar; Kagan, David

2013-01-01

The sight of a broken bat in Major League Baseball can produce anything from a humorous dribbler in the infield to a frightening pointed projectile headed for the stands. Bats usually break at the weakest point, typically in the handle. Breaking happens because the wood gets bent beyond the breaking point due to the wave sent down the bat created…

Salience and attention in surprisal-based accounts of language processing

Directory of Open Access Journals (Sweden)

Alessandra eZarcone

2016-06-01

Full Text Available The notion of salience has been singled out as the explanatory factor for a diverse range oflinguistic phenomena. In particular, perceptual salience (e.g. visual salience of objects in the world,acoustic prominence of linguistic sounds and semantic-pragmatic salience (e.g. prominence ofrecently mentioned or topical referents have been shown to influence language comprehensionand production. A different line of research has sought to account for behavioral correlates ofcognitive load during comprehension as well as for certain patterns in language usage usinginformation-theoretic notions, such as surprisal. Surprisal and salience both affect languageprocessing at different levels, but the relationship between the two has not been adequatelyelucidated, and the question of whether salience can be reduced to surprisal / predictability isstill open. Our review identifies two main challenges in addressing this question: terminologicalinconsistency and lack of integration between high and low levels of representations in salience-based accounts and surprisal-based accounts. We capitalise upon work in visual cognition inorder to orient ourselves in surveying the different facets of the notion of salience in linguisticsand their relation with models of surprisal. We find that work on salience highlights aspects oflinguistic communication that models of surprisal tend to overlook, namely the role of attentionand relevance to current goals, and we argue that the Predictive Coding framework provides aunified view which can account for the role played by attention and predictability at different levelsof processing and which can clarify the interplay between low and high levels of processes andbetween predictability-driven expectation and attention-driven focus.

Viral marketing: the use of surprise

NARCIS (Netherlands)

Lindgreen, A.; Vanhamme, J.; Clarke, I.; Flaherty, T.B.

2005-01-01

Viral marketing involves consumers passing along a company's marketing message to their friends, family, and colleagues. This chapter reviews viral marketing campaigns and argues that the emotion of surprise often is at work and that this mechanism resembles that of word-of-mouth marketing.

Distinct medial temporal networks encode surprise during motivation by reward versus punishment

Science.gov (United States)

Murty, Vishnu P.; LaBar, Kevin S.; Adcock, R. Alison

2016-01-01

Adaptive motivated behavior requires predictive internal representations of the environment, and surprising events are indications for encoding new representations of the environment. The medial temporal lobe memory system, including the hippocampus and surrounding cortex, encodes surprising events and is influenced by motivational state. Because behavior reflects the goals of an individual, we investigated whether motivational valence (i.e., pursuing rewards versus avoiding punishments) also impacts neural and mnemonic encoding of surprising events. During functional magnetic resonance imaging (fMRI), participants encountered perceptually unexpected events either during the pursuit of rewards or avoidance of punishments. Despite similar levels of motivation across groups, reward and punishment facilitated the processing of surprising events in different medial temporal lobe regions. Whereas during reward motivation, perceptual surprises enhanced activation in the hippocampus, during punishment motivation surprises instead enhanced activation in parahippocampal cortex. Further, we found that reward motivation facilitated hippocampal coupling with ventromedial PFC, whereas punishment motivation facilitated parahippocampal cortical coupling with orbitofrontal cortex. Behaviorally, post-scan testing revealed that reward, but not punishment, motivation resulted in greater memory selectivity for surprising events encountered during goal pursuit. Together these findings demonstrate that neuromodulatory systems engaged by anticipation of reward and punishment target separate components of the medial temporal lobe, modulating medial temporal lobe sensitivity and connectivity. Thus, reward and punishment motivation yield distinct neural contexts for learning, with distinct consequences for how surprises are incorporated into predictive mnemonic models of the environment. PMID:26854903

Distinct medial temporal networks encode surprise during motivation by reward versus punishment.

Science.gov (United States)

Murty, Vishnu P; LaBar, Kevin S; Adcock, R Alison

2016-10-01

Adaptive motivated behavior requires predictive internal representations of the environment, and surprising events are indications for encoding new representations of the environment. The medial temporal lobe memory system, including the hippocampus and surrounding cortex, encodes surprising events and is influenced by motivational state. Because behavior reflects the goals of an individual, we investigated whether motivational valence (i.e., pursuing rewards versus avoiding punishments) also impacts neural and mnemonic encoding of surprising events. During functional magnetic resonance imaging (fMRI), participants encountered perceptually unexpected events either during the pursuit of rewards or avoidance of punishments. Despite similar levels of motivation across groups, reward and punishment facilitated the processing of surprising events in different medial temporal lobe regions. Whereas during reward motivation, perceptual surprises enhanced activation in the hippocampus, during punishment motivation surprises instead enhanced activation in parahippocampal cortex. Further, we found that reward motivation facilitated hippocampal coupling with ventromedial PFC, whereas punishment motivation facilitated parahippocampal cortical coupling with orbitofrontal cortex. Behaviorally, post-scan testing revealed that reward, but not punishment, motivation resulted in greater memory selectivity for surprising events encountered during goal pursuit. Together these findings demonstrate that neuromodulatory systems engaged by anticipation of reward and punishment target separate components of the medial temporal lobe, modulating medial temporal lobe sensitivity and connectivity. Thus, reward and punishment motivation yield distinct neural contexts for learning, with distinct consequences for how surprises are incorporated into predictive mnemonic models of the environment. Copyright © 2016 Elsevier Inc. All rights reserved.

Can a droplet break up under flow without elongating? Fragmentation of smectic monodisperse droplets

Science.gov (United States)

Courbin, L.; Engl, W.; Panizza, P.

2004-06-01

We study the fragmentation under shear flow of smectic monodisperse droplets at high volume fraction. Using small angle light scattering and optical microscopy, we reveal the existence of a break-up mechanism for which the droplets burst into daughter droplets of the same size. Surprisingly, this fragmentation process, which is strain controlled and occurs homogeneously in the cell, does not require any transient elongation of the droplets. Systematic experiments as a function of the initial droplet size and the applied shear rate show that the rupture is triggered by an instability of the inner droplet structure.

A critical role for topoisomerase IIb and DNA double strand breaks in transcription.

Science.gov (United States)

Calderwood, Stuart K

2016-05-26

Recent studies have indicated a novel role for topoisomerase IIb in transcription. Transcription of heat shock genes, serum-induced immediate early genes and nuclear receptor-activated genes, each required DNA double strands generated by topoisomerase IIb. Such strand breaks seemed both necessary and sufficient for transcriptional activation. In addition, such transcription was associated with initiation of the DNA damage response pathways, including the activation of the enzymes: ataxia-telangiectasia mutated (ATM), DNA-dependent protein kinase and poly (ADP ribose) polymerase 1. DNA damage response signaling was involved both in transcription and in repair of DNA breaks generated by topoisomerase IIb.

Salience and Attention in Surprisal-Based Accounts of Language Processing.

Science.gov (United States)

Zarcone, Alessandra; van Schijndel, Marten; Vogels, Jorrig; Demberg, Vera

2016-01-01

The notion of salience has been singled out as the explanatory factor for a diverse range of linguistic phenomena. In particular, perceptual salience (e.g., visual salience of objects in the world, acoustic prominence of linguistic sounds) and semantic-pragmatic salience (e.g., prominence of recently mentioned or topical referents) have been shown to influence language comprehension and production. A different line of research has sought to account for behavioral correlates of cognitive load during comprehension as well as for certain patterns in language usage using information-theoretic notions, such as surprisal. Surprisal and salience both affect language processing at different levels, but the relationship between the two has not been adequately elucidated, and the question of whether salience can be reduced to surprisal / predictability is still open. Our review identifies two main challenges in addressing this question: terminological inconsistency and lack of integration between high and low levels of representations in salience-based accounts and surprisal-based accounts. We capitalize upon work in visual cognition in order to orient ourselves in surveying the different facets of the notion of salience in linguistics and their relation with models of surprisal. We find that work on salience highlights aspects of linguistic communication that models of surprisal tend to overlook, namely the role of attention and relevance to current goals, and we argue that the Predictive Coding framework provides a unified view which can account for the role played by attention and predictability at different levels of processing and which can clarify the interplay between low and high levels of processes and between predictability-driven expectation and attention-driven focus.

Salience and Attention in Surprisal-Based Accounts of Language Processing

Science.gov (United States)

Zarcone, Alessandra; van Schijndel, Marten; Vogels, Jorrig; Demberg, Vera

2016-01-01

The notion of salience has been singled out as the explanatory factor for a diverse range of linguistic phenomena. In particular, perceptual salience (e.g., visual salience of objects in the world, acoustic prominence of linguistic sounds) and semantic-pragmatic salience (e.g., prominence of recently mentioned or topical referents) have been shown to influence language comprehension and production. A different line of research has sought to account for behavioral correlates of cognitive load during comprehension as well as for certain patterns in language usage using information-theoretic notions, such as surprisal. Surprisal and salience both affect language processing at different levels, but the relationship between the two has not been adequately elucidated, and the question of whether salience can be reduced to surprisal / predictability is still open. Our review identifies two main challenges in addressing this question: terminological inconsistency and lack of integration between high and low levels of representations in salience-based accounts and surprisal-based accounts. We capitalize upon work in visual cognition in order to orient ourselves in surveying the different facets of the notion of salience in linguistics and their relation with models of surprisal. We find that work on salience highlights aspects of linguistic communication that models of surprisal tend to overlook, namely the role of attention and relevance to current goals, and we argue that the Predictive Coding framework provides a unified view which can account for the role played by attention and predictability at different levels of processing and which can clarify the interplay between low and high levels of processes and between predictability-driven expectation and attention-driven focus. PMID:27375525

Charming surprise

CERN Multimedia

Antonella Del Rosso

2011-01-01

The CP violation in charm quarks has always been thought to be extremely small. So, looking at particle decays involving matter and antimatter, the LHCb experiment has recently been surprised to observe that things might be different. Theorists are on the case. The study of the physics of the charm quark was not in the initial plans of the LHCb experiment, whose letter “b” stands for “beauty quark”. However, already one year ago, the Collaboration decided to look into a wider spectrum of processes that involve charm quarks among other things. The LHCb trigger allows a lot of these processes to be selected, and, among them, one has recently shown interesting features. Other experiments at b-factories have already performed the same measurement but this is the first time that it has been possible to achieve such high precision, thanks to the huge amount of data provided by the very high luminosity of the LHC. “We have observed the decay modes of the D0, a pa...

Targeting abnormal DNA double strand break repair in cancer

OpenAIRE

Rassool, Feyruz V.; Tomkinson, Alan E.

2010-01-01

A major challenge in cancer treatment is the development of therapies that target cancer cells with little or no toxicity to normal tissues and cells. Alterations in DNA double strand break (DSB) repair in cancer cells include both elevated and reduced levels of key repair proteins and changes in the relative contributions of the various DSB repair pathways. These differences can result in increased sensitivity to DSB-inducing agents and increased genomic instability. The development of agent...

Improving long term driving comfort by taking breaks - how break activity affects effectiveness

OpenAIRE

Sammonds, GM; Mansfield, NJ; Fray, M

2017-01-01

During long duration journeys, drivers are encouraged to take regular breaks. The benefits of breaks have been documented for safety; breaks may also be beneficial for comfort. The activity undertaken during a break may influence its effectiveness. Volunteers completed 3 journeys on a driving simulator. Each 130 min journey included a 10 min break after the first hour. During the break volunteers either stayed seated, left the simulator and sat in an adjacent room, or took a walk on a treadmi...

Forging New Pathways: The Impact of the Breaking through Initiative in Michigan. Executive Summary

Science.gov (United States)

Schanker, Jennifer B.; Taylor, Judith C.

2012-01-01

The Michigan Center for Student Success commissioned this study to determine whether strategies employed to improve adult students' success at 41 Breaking Through colleges nationwide have taken root at Michigan's original colleges and spread beyond them. A statewide survey revisited four of the colleges profiled in previous publications, and the…

Improving long term driving comfort by taking breaks - How break activity affects effectiveness.

Science.gov (United States)

Sammonds, George M; Mansfield, Neil J; Fray, Mike

2017-11-01

During long duration journeys, drivers are encouraged to take regular breaks. The benefits of breaks have been documented for safety; breaks may also be beneficial for comfort. The activity undertaken during a break may influence its effectiveness. Volunteers completed 3 journeys on a driving simulator. Each 130 min journey included a 10 min break after the first hour. During the break volunteers either stayed seated, left the simulator and sat in an adjacent room, or took a walk on a treadmill. The results show a reduction in driver discomfort during the break for all 3 conditions, but the effectiveness of the break was dependent on activity undertaken. Remaining seated in the vehicle provided some improvement in comfort, but more was experienced after leaving the simulator and sitting in an adjacent room. The most effective break occurred when the driver walked for 10 min on a treadmill. The benefits from taking a break continued until the end of the study (after a further hour of driving), such that comfort remained the best after taking a walk and worst for those who remained seated. It is concluded that taking a break and taking a walk is an effective method for relieving driving discomfort. Copyright © 2017 Elsevier Ltd. All rights reserved.

Hydraulic Response of Caisson Breakwaters in Multidirectional Breaking and Non-Breaking Waves

DEFF Research Database (Denmark)

Grønbech, J.; Kofoed, Jens Peter; Hald, Tue

1998-01-01

The present paper concerns the results and findings of a physical study on wave impacts on vertical caisson breakwaters situated in irregular, multidirectional breaking seas. The study has taken place as part of the framework programme "Dynamic of Structures" financially supported by the Danish T...... breaking waves at deep water. The study on wave overtopping showed that the 3D wave overtopping formula suggested by Franco et al., 1995b, predicts the wave overtopping reasonable well for both non breaking and breaking waves at deep water.......The present paper concerns the results and findings of a physical study on wave impacts on vertical caisson breakwaters situated in irregular, multidirectional breaking seas. The study has taken place as part of the framework programme "Dynamic of Structures" financially supported by the Danish...... induced loading and overtopping on caisson breakwaters situated in breaking seas. Regarding the wave forces only minor differences between breaking and non breaking waves in deep water were observed, and it was found that the prediction formula of Goda also seems to apply well for multidirectionally...

The Surprise Examination Paradox and the Second Incompleteness Theorem

OpenAIRE

Kritchman, Shira; Raz, Ran

2010-01-01

We give a new proof for Godel's second incompleteness theorem, based on Kolmogorov complexity, Chaitin's incompleteness theorem, and an argument that resembles the surprise examination paradox. We then go the other way around and suggest that the second incompleteness theorem gives a possible resolution of the surprise examination paradox. Roughly speaking, we argue that the flaw in the derivation of the paradox is that it contains a hidden assumption that one can prove the consistency of the...

'BREAKS' Protocol for Breaking Bad News.

Science.gov (United States)

Narayanan, Vijayakumar; Bista, Bibek; Koshy, Cheriyan

2010-05-01

Information that drastically alters the life world of the patient is termed as bad news. Conveying bad news is a skilled communication, and not at all easy. The amount of truth to be disclosed is subjective. A properly structured and well-orchestrated communication has a positive therapeutic effect. This is a process of negotiation between patient and physician, but physicians often find it difficult due to many reasons. They feel incompetent and are afraid of unleashing a negative reaction from the patient or their relatives. The physician is reminded of his or her own vulnerability to terminal illness, and find themselves powerless over emotional distress. Lack of sufficient training in breaking bad news is a handicap to most physicians and health care workers. Adherence to the principles of client-centered counseling is helpful in attaining this skill. Fundamental insight of the patient is exploited and the bad news is delivered in a structured manner, because the patient is the one who knows what is hurting him most and he is the one who knows how to move forward. Six-step SPIKES protocol is widely used for breaking bad news. In this paper, we put forward another six-step protocol, the BREAKS protocol as a systematic and easy communication strategy for breaking bad news. Development of competence in dealing with difficult situations has positive therapeutic outcome and is a professionally satisfying one.

Molecules with linear pi-conjugated pathways between all substituents : Omniconjugation

NARCIS (Netherlands)

van der Veen, M.H.; Rispens, M.T; Jonkman, H.T.; Hummelen, J.C.

In this paper, omniconjugation is introduced as a topological phenomenon in pi-conjugated systems. Omniconjugated molecules are defined by the fact that they provide direct and fully pi-conjugated pathways between all subdstituents attached to them. Surprisingly, until now such topologies have never

Molecules with Linear π-Conjugated Pathways between All Substituents : Omniconjugation

NARCIS (Netherlands)

Veen, Marleen H. van der; Rispens, Minze T.; Jonkman, Harry T.; Hummelen, Jan C.

2004-01-01

In this paper, omniconjugation is introduced as a topological phenomenon in π-conjugated systems. Omniconjugated molecules are defined by the fact that they provide direct and fully π-conjugated pathways between all substituents attached to them. Surprisingly, until now such topologies have never

B-L mediated SUSY breaking with radiative B-L symmetry breaking

International Nuclear Information System (INIS)

Kikuchi, Tatsuru; Kubo, Takayuki

2008-01-01

We explore a mechanism of radiative B-L symmetry breaking in analogous to the radiative electroweak symmetry breaking. The breaking scale of B-L symmetry is related to the neutrino masses through the see-saw mechanism. Once we incorporate the U(1) B-L gauge symmetry in SUSY models, the U(1) B-L gaugino, Z-tilde B-L appears, and it can mediate the SUSY breaking (Z-prime mediated SUSY breaking) at around the scale of 10 6 GeV. Then we find a links between the neutrino mass (more precisly the see-saw or B-L scale of order 10 6 GeV) and the Z-prime mediated SUSY breaking scale. It is also very interesting that the gluino at the weak scale becomes relatively light, and almost compressed mass spectra for the gaugino sector can be realized in this scenario, which is very interesting in scope of the LHC.

A Damage-Independent Role for 53BP1 that Impacts Break Order and Igh Architecture during Class Switch Recombination.

Science.gov (United States)

Rocha, Pedro P; Raviram, Ramya; Fu, Yi; Kim, JungHyun; Luo, Vincent M; Aljoufi, Arafat; Swanzey, Emily; Pasquarella, Alessandra; Balestrini, Alessia; Miraldi, Emily R; Bonneau, Richard; Petrini, John; Schotta, Gunnar; Skok, Jane A

2016-06-28

During class switch recombination (CSR), B cells replace the Igh Cμ or δ exons with another downstream constant region exon (CH), altering the antibody isotype. CSR occurs through the introduction of AID-mediated double-strand breaks (DSBs) in switch regions and subsequent ligation of broken ends. Here, we developed an assay to investigate the dynamics of DSB formation in individual cells. We demonstrate that the upstream switch region Sμ is first targeted during recombination and that the mechanism underlying this control relies on 53BP1. Surprisingly, regulation of break order occurs through residual binding of 53BP1 to chromatin before the introduction of damage and independent of its established role in DNA repair. Using chromosome conformation capture, we show that 53BP1 mediates changes in chromatin architecture that affect break order. Finally, our results explain how changes in Igh architecture in the absence of 53BP1 could promote inversional rearrangements that compromise CSR. Copyright © 2016 The Author(s). Published by Elsevier Inc. All rights reserved.

Parental Break-Ups and Stress

DEFF Research Database (Denmark)

Dissing, Agnete S.; Dich, Nadya; Nybo Andersen, Anne-Marie

2017-01-01

Background: Parental break-up is wide spread, and the effects of parental break-up on children’s well-being are known. The evidence regarding child age at break-up and subsequent family arrangements is inconclusive. Aim: to estimate the effects of parental break-up on stress in pre-adolescent chi......Background: Parental break-up is wide spread, and the effects of parental break-up on children’s well-being are known. The evidence regarding child age at break-up and subsequent family arrangements is inconclusive. Aim: to estimate the effects of parental break-up on stress in pre......-adolescent children with a specific focus on age at break-up and post-breakup family arrangements. Methods: We used data from the Danish National Birth Cohort. Participants included 44 509 children followed from birth to age 11. Stress was self-reported by children at age 11, when the children also reported...... on parental break-up and post break-up family arrangements. Results: Twenty-one percent of the children had experienced a parental break-up at age 11, and those who had experienced parental break-up showed a higher risk of stress (OR:1.72, 95%CI:1.55;1.91) regardless of the child’s age at break-up. Children...

PT-symmetry breaking in complex nonlinear wave equations and their deformations

International Nuclear Information System (INIS)

Cavaglia, Andrea; Fring, Andreas; Bagchi, Bijan

2011-01-01

We investigate complex versions of the Korteweg-deVries equations and an Ito-type nonlinear system with two coupled nonlinear fields. We systematically construct rational, trigonometric/hyperbolic and elliptic solutions for these models including those which are physically feasible in an obvious sense, that is those with real energies, but also those with complex energy spectra. The reality of the energy is usually attributed to different realizations of an antilinear symmetry, as for instance PT-symmetry. It is shown that the symmetry can be spontaneously broken in two alternative ways either by specific choices of the domain or by manipulating the parameters in the solutions of the model, thus leading to complex energies. Surprisingly, the reality of the energies can be regained in some cases by a further breaking of the symmetry on the level of the Hamiltonian. In many examples, some of the fixed points in the complex solution for the field undergo a Hopf bifurcation in the PT-symmetry breaking process. By employing several different variants of the symmetries we propose many classes of new invariant extensions of these models and study their properties. The reduction of some of these models yields complex quantum mechanical models previously studied.

Pupil size tracks perceptual content and surprise.

Science.gov (United States)

Kloosterman, Niels A; Meindertsma, Thomas; van Loon, Anouk M; Lamme, Victor A F; Bonneh, Yoram S; Donner, Tobias H

2015-04-01

Changes in pupil size at constant light levels reflect the activity of neuromodulatory brainstem centers that control global brain state. These endogenously driven pupil dynamics can be synchronized with cognitive acts. For example, the pupil dilates during the spontaneous switches of perception of a constant sensory input in bistable perceptual illusions. It is unknown whether this pupil dilation only indicates the occurrence of perceptual switches, or also their content. Here, we measured pupil diameter in human subjects reporting the subjective disappearance and re-appearance of a physically constant visual target surrounded by a moving pattern ('motion-induced blindness' illusion). We show that the pupil dilates during the perceptual switches in the illusion and a stimulus-evoked 'replay' of that illusion. Critically, the switch-related pupil dilation encodes perceptual content, with larger amplitude for disappearance than re-appearance. This difference in pupil response amplitude enables prediction of the type of report (disappearance vs. re-appearance) on individual switches (receiver-operating characteristic: 61%). The amplitude difference is independent of the relative durations of target-visible and target-invisible intervals and subjects' overt behavioral report of the perceptual switches. Further, we show that pupil dilation during the replay also scales with the level of surprise about the timing of switches, but there is no evidence for an interaction between the effects of surprise and perceptual content on the pupil response. Taken together, our results suggest that pupil-linked brain systems track both the content of, and surprise about, perceptual events. © 2015 Federation of European Neuroscience Societies and John Wiley & Sons Ltd.

Duality after supersymmetry breaking

International Nuclear Information System (INIS)

Shadmi, Yael; Cheng, Hsin-Chia

1998-05-01

Starting with two supersymmetric dual theories, we imagine adding a chiral perturbation that breaks supersymmetry dynamically. At low energy we then get two theories with soft supersymmetry-breaking terms that are generated dynamically. With a canonical Kaehler potential, some of the scalars of the ''magnetic'' theory typically have negative mass-squared, and the vector-like symmetry is broken. Since for large supersymmetry breaking the ''electric'' theory becomes ordinary QCD, the two theories are then incompatible. For small supersymmetry breaking, if duality still holds, the magnetic theory analysis implies specific patterns of chiral symmetry breaking in supersymmetric QCD with small soft masses

Mycobacterial nonhomologous end joining mediates mutagenic repair of chromosomal double-strand DNA breaks.

Science.gov (United States)

Stephanou, Nicolas C; Gao, Feng; Bongiorno, Paola; Ehrt, Sabine; Schnappinger, Dirk; Shuman, Stewart; Glickman, Michael S

2007-07-01

Bacterial nonhomologous end joining (NHEJ) is a recently described DNA repair pathway best characterized in mycobacteria. Bacterial NHEJ proteins LigD and Ku have been analyzed biochemically, and their roles in linear plasmid repair in vivo have been verified genetically; yet the contributions of NHEJ to repair of chromosomal DNA damage are unknown. Here we use an extensive set of NHEJ- and homologous recombination (HR)-deficient Mycobacterium smegmatis strains to probe the importance of HR and NHEJ in repairing diverse types of chromosomal DNA damage. An M. smegmatis Delta recA Delta ku double mutant has no apparent growth defect in vitro. Loss of the NHEJ components Ku and LigD had no effect on sensitivity to UV radiation, methyl methanesulfonate, or quinolone antibiotics. NHEJ deficiency had no effect on sensitivity to ionizing radiation in logarithmic- or early-stationary-phase cells but was required for ionizing radiation resistance in late stationary phase in 7H9 but not LB medium. In addition, NHEJ components were required for repair of I-SceI mediated chromosomal double-strand breaks (DSBs), and in the absence of HR, the NHEJ pathway rapidly mutates the chromosomal break site. The molecular outcomes of NHEJ-mediated chromosomal DSB repair involve predominantly single-nucleotide insertions at the break site, similar to previous findings using plasmid substrates. These findings demonstrate that prokaryotic NHEJ is specifically required for DSB repair in late stationary phase and can mediate mutagenic repair of homing endonuclease-generated chromosomal DSBs.

The conceptualization model problem—surprise

Science.gov (United States)

Bredehoeft, John

2005-03-01

The foundation of model analysis is the conceptual model. Surprise is defined as new data that renders the prevailing conceptual model invalid; as defined here it represents a paradigm shift. Limited empirical data indicate that surprises occur in 20-30% of model analyses. These data suggest that groundwater analysts have difficulty selecting the appropriate conceptual model. There is no ready remedy to the conceptual model problem other than (1) to collect as much data as is feasible, using all applicable methods—a complementary data collection methodology can lead to new information that changes the prevailing conceptual model, and (2) for the analyst to remain open to the fact that the conceptual model can change dramatically as more information is collected. In the final analysis, the hydrogeologist makes a subjective decision on the appropriate conceptual model. The conceptualization problem does not render models unusable. The problem introduces an uncertainty that often is not widely recognized. Conceptual model uncertainty is exacerbated in making long-term predictions of system performance. C'est le modèle conceptuel qui se trouve à base d'une analyse sur un modèle. On considère comme une surprise lorsque le modèle est invalidé par des données nouvelles; dans les termes définis ici la surprise est équivalente à un change de paradigme. Des données empiriques limitées indiquent que les surprises apparaissent dans 20 à 30% des analyses effectuées sur les modèles. Ces données suggèrent que l'analyse des eaux souterraines présente des difficultés lorsqu'il s'agit de choisir le modèle conceptuel approprié. Il n'existe pas un autre remède au problème du modèle conceptuel que: (1) rassembler autant des données que possible en utilisant toutes les méthodes applicables—la méthode des données complémentaires peut conduire aux nouvelles informations qui vont changer le modèle conceptuel, et (2) l'analyste doit rester ouvert au fait

JNK Phosphorylates SIRT6 to Stimulate DNA Double-Strand Break Repair in Response to Oxidative Stress by Recruiting PARP1 to DNA Breaks

Directory of Open Access Journals (Sweden)

Michael Van Meter

2016-09-01

Full Text Available The accumulation of damage caused by oxidative stress has been linked to aging and to the etiology of numerous age-related diseases. The longevity gene, sirtuin 6 (SIRT6, promotes genome stability by facilitating DNA repair, especially under oxidative stress conditions. Here we uncover the mechanism by which SIRT6 is activated by oxidative stress to promote DNA double-strand break (DSB repair. We show that the stress-activated protein kinase, c-Jun N-terminal kinase (JNK, phosphorylates SIRT6 on serine 10 in response to oxidative stress. This post-translational modification facilitates the mobilization of SIRT6 to DNA damage sites and is required for efficient recruitment of poly (ADP-ribose polymerase 1 (PARP1 to DNA break sites and for efficient repair of DSBs. Our results demonstrate a post-translational mechanism regulating SIRT6, and they provide the link between oxidative stress signaling and DNA repair pathways that may be critical for hormetic response and longevity assurance.

RNF4-mediated polyubiquitination regulates the Fanconi anemia/BRCA pathway

OpenAIRE

Xie, Jenny; Kim, Hyungjin; Moreau, Lisa A.; Puhalla, Shannon; Garber, Judy; Al Abo, Muthana; Takeda, Shunichi; D’Andrea, Alan D.

2015-01-01

The Fanconi anemia/BRCA (FA/BRCA) pathway is a DNA repair pathway that is required for excision of DNA interstrand cross-links. The 17 known FA proteins, along with several FA-associated proteins (FAAPs), cooperate in this pathway to detect, unhook, and excise DNA cross-links and to subsequently repair the double-strand breaks generated in the process. In the current study, we identified a patient with FA with a point mutation in FANCA, which encodes a mutant FANCA protein (FANCAI939S). FANCA...

Glial heterotopia of maxilla: A clinical surprise

Directory of Open Access Journals (Sweden)

Santosh Kumar Mahalik

2011-01-01

Full Text Available Glial heterotopia is a rare congenital mass lesion which often presents as a clinical surprise. We report a case of extranasal glial heterotopia in a neonate with unusual features. The presentation, management strategy, etiopathogenesis and histopathology of the mass lesion has been reviewed.

Beyond surprise : A longitudinal study on the experience of visual-tactual incongruities in products

NARCIS (Netherlands)

Ludden, G.D.S.; Schifferstein, H.N.J.; Hekkert, P.

2012-01-01

When people encounter products with visual-tactual incongruities, they are likely to be surprised because the product feels different than expected. In this paper, we investigate (1) the relationship between surprise and the overall liking of the products, (2) the emotions associated with surprise,

Can we safely target the WNT pathway?

Science.gov (United States)

Kahn, Michael

2015-01-01

WNT–β-catenin signalling is involved in a multitude of developmental processes and the maintenance of adult tissue homeostasis by regulating cell proliferation, differentiation, migration, genetic stability and apoptosis, as well as by maintaining adult stem cells in a pluripotent state. Not surprisingly, aberrant regulation of this pathway is therefore associated with a variety of diseases, including cancer, fibrosis and neurodegeneration. Despite this knowledge, therapeutic agents specifically targeting the WNT pathway have only recently entered clinical trials and none has yet been approved. This Review examines the problems and potential solutions to this vexing situation and attempts to bring them into perspective. PMID:24981364

Identification of the Entner-Doudoroff pathway in an antibiotic-producing actinomycete species

DEFF Research Database (Denmark)

Gunnarsson, Nina; Mortensen, Uffe Hasbro; Sosio, M.

2004-01-01

the primary metabolic pathways of the poorly characterized antibiotic-producing actinomycete Nonomuraea sp. ATCC 39727. Surprisingly, it was found that Nonomuraea sp. ATCC 39272 predominantly metabolizes glucose via the Entner-Doudoroff (ED) pathway. This represents the first time that the ED pathway has been...... to design metabolic engineering strategies towards construction of more efficient producers of specific metabolites. In this context, methods that allow rapid and reliable mapping of the central carbon metabolism are valuable. In the present study, a C-13 labelling-based method was used to identify...... recognized as the main catabolic pathway in an actinomycete. The Nonomuraea genes encoding the key enzymes of the ED pathway were subsequently identified, sequenced and functionally described....

Classroom-based physical activity breaks and children’s attention: cognitive engagement works!

Directory of Open Access Journals (Sweden)

Mirko Schmidt

2016-10-01

Full Text Available Classroom-based physical activity breaks are postulated to positively impact children’s attention during their school day. However, empirical evidence for this claim is scarce and the role of cognitive engagement in enhancing children’s attentional performance is unexplored in studies on physical activity breaks. The aim of the present study was therefore to disentangle the separate and/or combined effects of physical exertion and cognitive engagement induced by physical activity breaks on primary school children’s attention. In addition, the role of children’s affective reactions to acute interventions at school was investigated. Using a 2 × 2 between-subjects experimental design, 92 children between the ages of 11 and 12 years (M = 11.77, SD = 0.41 were randomly assigned to one of four experimental conditions: (1 combo group (physical activity with high cognitive demands, (2 cognition group (sedentary with high cognitive demands, (3 physical group (physical activity with low cognitive demands, and (4 control group (sedentary with low cognitive demands. Attention and affect were measured before and immediately after a 10-minute intervention. ANCOVAs revealed that whereas physical exertion had no effect on any measure of children’s attentional performance, cognitive engagement was the crucial factor leading to increased focused attention and enhanced processing speed. Mediational analyses showed that changes in positive affect during the interventions mediated the effect between cognitive engagement and focused attention as well as between cognitive engagement and processing speed. These surprising results are discussed in the light of theories predicting both facilitating and deteriorative effects of positive affect on cognitive performance.

Normal Patterns of Deja Experience in a Healthy, Blind Male: Challenging Optical Pathway Delay Theory

Science.gov (United States)

O'Connor, Akira R.; Moulin, Christopher J. A.

2006-01-01

We report the case of a 25-year-old healthy, blind male, MT, who experiences normal patterns of deja vu. The optical pathway delay theory of deja vu formation assumes that neuronal input from the optical pathways is necessary for the formation of the experience. Surprisingly, although the sensation of deja vu is known to be experienced by blind…

Assessment of evidence for nanosized titanium dioxide-generated DNA strand breaks and oxidatively damaged DNA in cells and animal models

DEFF Research Database (Denmark)

Møller, Peter; Jensen, Ditte Marie; Wils, Regitze Sølling

2017-01-01

Nanosized titanium dioxide (TiO2) has been investigated in numerous studies on genotoxicity, including comet assay endpoints and oxidatively damaged DNA in cell cultures and animal models. The results have been surprisingly mixed, which might be attributed to physico-chemical differences...... culture studies also demonstrate increased levels of oxidatively damaged DNA after exposure to TiO2. There are relatively few studies on animal models where DNA strand breaks and oxidatively damaged DNA have been tested with reliable methods. Collectively, this review shows that exposure to nanosized TiO2...... of the tested TiO2. In the present review, we assess the role of certain methodological issues and publication bias. The analysis shows that studies on DNA strand breaks without proper assay controls or very low intra-group variation tend to show statistically significant effects. Levels of oxidatively damaged...

A Statistical Analysis of the Relationship between Harmonic Surprise and Preference in Popular Music.

Science.gov (United States)

Miles, Scott A; Rosen, David S; Grzywacz, Norberto M

2017-01-01

Studies have shown that some musical pieces may preferentially activate reward centers in the brain. Less is known, however, about the structural aspects of music that are associated with this activation. Based on the music cognition literature, we propose two hypotheses for why some musical pieces are preferred over others. The first, the Absolute-Surprise Hypothesis, states that unexpected events in music directly lead to pleasure. The second, the Contrastive-Surprise Hypothesis, proposes that the juxtaposition of unexpected events and subsequent expected events leads to an overall rewarding response. We tested these hypotheses within the framework of information theory, using the measure of "surprise." This information-theoretic variable mathematically describes how improbable an event is given a known distribution. We performed a statistical investigation of surprise in the harmonic structure of songs within a representative corpus of Western popular music, namely, the McGill Billboard Project corpus. We found that chords of songs in the top quartile of the Billboard chart showed greater average surprise than those in the bottom quartile. We also found that the different sections within top-quartile songs varied more in their average surprise than the sections within bottom-quartile songs. The results of this study are consistent with both the Absolute- and Contrastive-Surprise Hypotheses. Although these hypotheses seem contradictory to one another, we cannot yet discard the possibility that both absolute and contrastive types of surprise play roles in the enjoyment of popular music. We call this possibility the Hybrid-Surprise Hypothesis. The results of this statistical investigation have implications for both music cognition and the human neural mechanisms of esthetic judgments.

Peaking cladding temperature and break equivalent size of intermediate break loss of coolant accident

International Nuclear Information System (INIS)

Luo Bangqi

2012-01-01

The analysis results of intermediate break loss of coolant accident for the nuclear power plant of million kw level showed to be as following: (1) At the begin of life, the break occur simultaneity reactor shutdown with L(X)P. it's equivalent break size and peaking cladding temperature is respectively 20 cm and 849℃. (2) At the begin of life, the break occur simultaneity reactor shutdown without loop. the reactor coolant pumps will be stop after reactor shutdown 10 minutes, it's equivalent break size and peaking cladding temperature is respectively 10.5 cm and 921℃. (3) At the bur up of 31 GWd/t(EOC1). the break occur simultaneity reactor shutdown without loop, the reactor coolant pumps will be stop after reactor shutdown 20 minutes, it's equivalent break size and peaking cladding temperature is respectively 8 cm and 1145℃. The above analysis results showed that the peaking cladding temperature of intermediate break loss of coolant accident is not only related with the break equivalent size and core bur up, and is closely related with the stop time of coolant pumps because the coolant pumps would drive the coolant from safety system to produce the seal loop in break loop and affect the core coolant flow, results in the fuel cladding temperature increasing or damaging. Therefore, the break spectrum, burn up spectrum, the stop time of coolant pumps and operator action time will need to detail analysis and provide appropriate operating procedure, otherwise the peaking cladding temperature will exceed 1204℃ and threaten the safety of the reactor core when the intermediate break loss of coolant accident occur in some break equivalent size, burn up, stop pumps time and operator action not appropriate. The pressurizer pressure low signal simultaneity containment pressure higher signal were used as the operator manual close the signal of reactor coolant pumps after reactor shutdown of 20 minutes. have successful solved the operator intervention time from 10 minutes

Ignorance, Vulnerability and the Occurrence of "Radical Surprises": Theoretical Reflections and Empirical Findings

Science.gov (United States)

Kuhlicke, C.

2009-04-01

By definition natural disasters always contain a moment of surprise. Their occurrence is mostly unforeseen and unexpected. They hit people unprepared, overwhelm them and expose their helplessness. Yet, there is surprisingly little known on the reasons for their being surprised. Aren't natural disasters expectable and foreseeable after all? Aren't the return rates of most hazards well known and shouldn't people be better prepared? The central question of this presentation is hence: Why do natural disasters so often radically surprise people at all (and how can we explain this being surprised)? In the first part of the presentation, it is argued that most approaches to vulnerability are not able to grasp this moment of surprise. On the contrary, they have their strength in unravelling the expectable: A person who is marginalized or even oppressed in everyday life is also vulnerable during times of crisis and stress, at least this is the central assumption of most vulnerability studies. In the second part, an understanding of vulnerability is developed, which allows taking into account such radical surprises. First, two forms of the unknown are differentiated: An area of the unknown an actor is more or less aware of (ignorance), and an area, which is not even known to be not known (nescience). The discovery of the latter is mostly associated with a "radical surprise", since it is per definition impossible to prepare for it. Second, a definition of vulnerability is proposed, which allows capturing the dynamics of surprises: People are vulnerable when they discover their nescience exceeding by definition previously established routines, stocks of knowledge and resources—in a general sense their capacities—to deal with their physical and/or social environment. This definition explicitly takes the view of different actors serious and departs from their being surprised. In the third part findings of a case study are presented, the 2002 flood in Germany. It is shown

Mammalian RAD52 Functions in Break-Induced Replication Repair of Collapsed DNA Replication Forks

DEFF Research Database (Denmark)

Sotiriou, Sotirios K; Kamileri, Irene; Lugli, Natalia

2016-01-01

Human cancers are characterized by the presence of oncogene-induced DNA replication stress (DRS), making them dependent on repair pathways such as break-induced replication (BIR) for damaged DNA replication forks. To better understand BIR, we performed a targeted siRNA screen for genes whose...... RAD52 facilitates repair of collapsed DNA replication forks in cancer cells....

Decision-making under surprise and uncertainty: Arsenic contamination of water supplies

Science.gov (United States)

Randhir, Timothy O.; Mozumder, Pallab; Halim, Nafisa

2018-05-01

With ignorance and potential surprise dominating decision making in water resources, a framework for dealing with such uncertainty is a critical need in hydrology. We operationalize the 'potential surprise' criterion proposed by Shackle, Vickers, and Katzner (SVK) to derive decision rules to manage water resources under uncertainty and ignorance. We apply this framework to managing water supply systems in Bangladesh that face severe, naturally occurring arsenic contamination. The uncertainty involved with arsenic in water supplies makes the application of conventional analysis of decision-making ineffective. Given the uncertainty and surprise involved in such cases, we find that optimal decisions tend to favor actions that avoid irreversible outcomes instead of conventional cost-effective actions. We observe that a diversification of the water supply system also emerges as a robust strategy to avert unintended outcomes of water contamination. Shallow wells had a slight higher optimal level (36%) compare to deep wells and surface treatment which had allocation levels of roughly 32% under each. The approach can be applied in a variety of other cases that involve decision making under uncertainty and surprise, a frequent situation in natural resources management.

Application of Laser Micro-irradiation for Examination of Single and Double Strand Break Repair in Mammalian Cells.

Science.gov (United States)

Holton, Nathaniel W; Andrews, Joel F; Gassman, Natalie R

2017-09-05

Highly coordinated DNA repair pathways exist to detect, excise and replace damaged DNA bases, and coordinate repair of DNA strand breaks. While molecular biology techniques have clarified structure, enzymatic functions, and kinetics of repair proteins, there is still a need to understand how repair is coordinated within the nucleus. Laser micro-irradiation offers a powerful tool for inducing DNA damage and monitoring the recruitment of repair proteins. Induction of DNA damage by laser micro-irradiation can occur with a range of wavelengths, and users can reliably induce single strand breaks, base lesions and double strand breaks with a range of doses. Here, laser micro-irradiation is used to examine repair of single and double strand breaks induced by two common confocal laser wavelengths, 355 nm and 405 nm. Further, proper characterization of the applied laser dose for inducing specific damage mixtures is described, so users can reproducibly perform laser micro-irradiation data acquisition and analysis.

A robust network of double-strand break repair pathways governs genome integrity during C. elegans development.

NARCIS (Netherlands)

Pontier, D.B.; Tijsterman, M.

2009-01-01

To preserve genomic integrity, various mechanisms have evolved to repair DNA double-strand breaks (DSBs). Depending on cell type or cell cycle phase, DSBs can be repaired error-free, by homologous recombination, or with concomitant loss of sequence information, via nonhomologous end-joining (NHEJ)

To Break or Not To Break: Sex Chromosome Hemizygosity During Meiosis in Caenorhabditis.

Science.gov (United States)

Van, Mike V; Larson, Braden J; Engebrecht, JoAnne

2016-11-01

Meiotic recombination establishes connections between homologous chromosomes to promote segregation. Hemizygous regions of sex chromosomes have no homologous chromosome to recombine with, yet must be transmitted through meiosis. An extreme case of hemizygosity exists in the genus Caenorhabditis, where males have a single X chromosome that completely lacks a homologous partner. To determine whether similar strategies have evolved to accommodate hemizygosity of the X during male meiosis in Caenorhabditis with distinct modes of sexual reproduction, we examined induction and processing of meiotic double strand breaks (DSBs) in androdioecious (hermaphrodite/male) Caenorhabditis elegans and C. briggsae, and gonochoristic (female/male) C. remanei and C. brenneri Analysis of the recombinase RAD-51 suggests more meiotic DSBs are induced in gonochoristic vs. androdioecious species. However, in late prophase in all species, chromosome pairs are restructured into bivalents around a single axis, suggesting that the holocentric nature of Caenorhabditis chromosomes dictates a single crossover per bivalent regardless of the number of DSBs induced. Interestingly, RAD-51 foci were readily observed on the X chromosome of androdioecious male germ cells, while very few were detected in gonochoristic male germ cells. As in C. elegans, the X chromosome in C. briggsae male germ cells undergoes transient pseudosynapsis and flexibility in DSB repair pathway choice. In contrast, in C. remanei and C. brenneri male germ cells, the X chromosome does not undergo pseudosynapsis and appears refractory to SPO-11-induced breaks. Together our results suggest that distinct strategies have evolved to accommodate sex chromosome hemizygosity during meiosis in closely related Caenorhabditis species. Copyright © 2016 by the Genetics Society of America.

Sleeping beauties in theoretical physics 26 surprising insights

CERN Document Server

Padmanabhan, Thanu

2015-01-01

This book addresses a fascinating set of questions in theoretical physics which will both entertain and enlighten all students, teachers and researchers and other physics aficionados. These range from Newtonian mechanics to quantum field theory and cover several puzzling issues that do not appear in standard textbooks. Some topics cover conceptual conundrums, the solutions to which lead to surprising insights; some correct popular misconceptions in the textbook discussion of certain topics; others illustrate deep connections between apparently unconnected domains of theoretical physics; and a few provide remarkably simple derivations of results which are not often appreciated. The connoisseur of theoretical physics will enjoy a feast of pleasant surprises skilfully prepared by an internationally acclaimed theoretical physicist. Each topic is introduced with proper background discussion and special effort is taken to make the discussion self-contained, clear and comprehensible to anyone with an undergraduate e...

Dynamical supersymmetry breaking

International Nuclear Information System (INIS)

Affleck, I.

1985-03-01

Supersymmetry, and in particular, dynamical supersymmetry breaking, offers the hope of a natural solution of the gauge hierarchy problem in grand unification. I briefly review recent work on dynamical supersymmetry breaking in four-dimensional Higgs theories and its application to grand unified model building

Breaking of ocean surface waves

International Nuclear Information System (INIS)

Babanin, A.V.

2009-01-01

Wind-generated waves are the most prominent feature of the ocean surface, and so are breaking waves manifested by the appearance of sporadic whitecaps. Such breaking represents one of the most interesting and most challenging problems for both fluid mechanics and physical oceanography. It is an intermittent random process, very fast by comparison with other processes in the wave breaking on the water surface is not continuous, but its role in maintaining the energy balance within the continuous wind-wave field is critical. Ocean wave breaking also plays the primary role in the air-sea exchange of momentum, mass and heat, and it is of significant importance for ocean remote sensing, coastal and maritime engineering, navigation and other practical applications. Understanding the wave breaking its occurrence, the breaking rates and even ability to describe its onset has been hindered for decades by the strong non-linearity of the process, together with its irregular and ferocious nature. Recently, this knowledge has significantly advanced, and the review paper is an attempt to summarise the facts into a consistent, albeit still incomplete picture of the phenomenon. In the paper, variety of definitions related to the were breaking are discussed and formulated and methods for breaking detection and measurements are examined. Most of attention is dedicated to the research of wave breaking probability and severity. Experimental, observational, numerical and statistical approaches and their outcomes are reviewed. Present state of the wave-breaking research and knowledge is analysed and main outstanding problems are outlined (Authors)

Bubbles and breaking waves

Science.gov (United States)

Thorpe, S. A.

1980-01-01

The physical processes which control the transfer of gases between the atmosphere and oceans or lakes are poorly understood. Clouds of micro-bubbles have been detected below the surface of Loch Ness when the wind is strong enough to cause the waves to break. The rate of transfer of gas into solution from these bubbles is estimated to be significant if repeated on a global scale. We present here further evidence that the bubbles are caused by breaking waves, and discuss the relationship between the mean frequency of wave breaking at a fixed point and the average distance between breaking waves, as might be estimated from an aerial photograph.

The June surprises: balls, strikes, and the fog of war.

Science.gov (United States)

Fried, Charles

2013-04-01

At first, few constitutional experts took seriously the argument that the Patient Protection and Affordable Care Act exceeded Congress's power under the commerce clause. The highly political opinions of two federal district judges - carefully chosen by challenging plaintiffs - of no particular distinction did not shake that confidence that the act was constitutional. This disdain for the challengers' arguments was only confirmed when the act was upheld by two highly respected conservative court of appeals judges in two separate circuits. But after the hostile, even mocking questioning of the government's advocate in the Supreme Court by the five Republican-appointed justices, the expectation was that the act would indeed be struck down on that ground. So it came as no surprise when the five opined the act did indeed exceed Congress's commerce clause power. But it came as a great surprise when Chief Justice John Roberts, joined by the four Democrat-appointed justices, ruled that the act could be sustained as an exercise of Congress's taxing power - a ground urged by the government almost as an afterthought. It was further surprising, even shocking, that Justices Antonin Scalia, Anthony Kennedy, Clarence Thomas, and Samuel Alito not only wrote a joint opinion on the commerce clause virtually identical to that of their chief, but that in writing it they did not refer to or even acknowledge his opinion. Finally surprising was the fact that Justices Ruth Bader Ginsburg and Stephen Breyer joined the chief in holding that aspects of the act's Medicaid expansion were unconstitutional. This essay ponders and tries to unravel some of these puzzles.

Human Xip1 (C2orf13) is a novel regulator of cellular responses to DNA strand breaks

DEFF Research Database (Denmark)

Bekker-Jensen, Simon; Fugger, Kasper; Danielsen, Jannie Rendtlew

2007-01-01

DNA strand breaks arise continuously as the result of intracellular metabolism and in response to a multitude of genotoxic agents. To overcome such challenges to genomic stability, cells have evolved genome surveillance pathways that detect and repair damaged DNA in a coordinated fashion. Here we...

Alkaline gel electrophoresis assay to detect DNA strand breaks and repair mechanisms in Escherichia coli

International Nuclear Information System (INIS)

Mattos, Jose Carlos Pelielo de; Motta, Ellen Serri da; Oliveira, Marcia Betania Nunes de; Dantas, Flavio Jose da Silva; Araujo, Adriano Caldeira de

2008-01-01

Reactive oxygen species (ROS) can induce lesions in different cellular targets, including DNA. Stannous chloride (SnCl 2 ) is a ROS generator, leading to lethality in Escherichia coli (E. coli), with the base excision repair (BER) mechanism playing a role in this process. Many techniques have been developed to detect genotoxicity, as comet assay, in eukaryotic cells, and plasmid DNA agarose gel electrophoresis. In this study, an adaptation of the alkaline gel electrophoresis method was carried out to ascertain the induction of strand breaks by SnCl 2 in bacterial DNA, from E. coli BER mutants, and its repair pathway. Results obtained show that SnCl 2 was able to induce DNA strand breaks in all strains tested. Moreover, endonuclease IV and exonuclease III play a role in DNA repair. On the whole, data has shown that the alkaline gel electrophoresis assay could be used both for studying DNA strand breaks induction and for associated repair mechanisms. (author)

Alkaline gel electrophoresis assay to detect DNA strand breaks and repair mechanisms in Escherichia coli

Energy Technology Data Exchange (ETDEWEB)

Mattos, Jose Carlos Pelielo de; Motta, Ellen Serri da; Oliveira, Marcia Betania Nunes de; Dantas, Flavio Jose da Silva; Araujo, Adriano Caldeira de [Universidade do Estado do Rio de Janeiro (UERJ), RJ (Brazil). Dept. de Biofisica e Biometria. Lab. de Radio e Fotobiologia]. E-mail: jcmattos@uerj.br

2008-12-15

Reactive oxygen species (ROS) can induce lesions in different cellular targets, including DNA. Stannous chloride (SnCl{sub 2}) is a ROS generator, leading to lethality in Escherichia coli (E. coli), with the base excision repair (BER) mechanism playing a role in this process. Many techniques have been developed to detect genotoxicity, as comet assay, in eukaryotic cells, and plasmid DNA agarose gel electrophoresis. In this study, an adaptation of the alkaline gel electrophoresis method was carried out to ascertain the induction of strand breaks by SnCl{sub 2} in bacterial DNA, from E. coli BER mutants, and its repair pathway. Results obtained show that SnCl{sub 2} was able to induce DNA strand breaks in all strains tested. Moreover, endonuclease IV and exonuclease III play a role in DNA repair. On the whole, data has shown that the alkaline gel electrophoresis assay could be used both for studying DNA strand breaks induction and for associated repair mechanisms. (author)

A model of intrinsic symmetry breaking

International Nuclear Information System (INIS)

Ge, Li; Li, Sheng; George, Thomas F.; Sun, Xin

2013-01-01

Different from the symmetry breaking associated with a phase transition, which occurs when the controlling parameter is manipulated across a critical point, the symmetry breaking presented in this Letter does not need parameter manipulation. Instead, the system itself suddenly undergoes symmetry breaking at a certain time during its evolution, which is intrinsic symmetry breaking. Through a polymer model, it is revealed that the origin of the intrinsic symmetry breaking is nonlinearity, which produces instability at the instance when the evolution crosses an inflexion point, where this instability breaks the original symmetry

Simulation of breaking waves using the high-order spectral method with laboratory experiments: Wave-breaking onset

Science.gov (United States)

Seiffert, Betsy R.; Ducrozet, Guillaume; Bonnefoy, Félicien

2017-11-01

This study investigates a wave-breaking onset criteria to be implemented in the non-linear potential flow solver HOS-NWT. The model is a computationally efficient, open source code, which solves for the free surface in a numerical wave tank using the High-Order Spectral (HOS) method. The goal of this study is to determine the best method to identify the onset of random single and multiple breaking waves over a large domain at the exact time they occur. To identify breaking waves, a breaking onset criteria based on the ratio of local energy flux velocity to the local crest velocity, introduced by Barthelemy et al. (2017) is selected. The breaking parameter is uniquely applied in the numerical model in that calculations of the breaking onset criteria ratio are not made only at the location of the wave crest, but at every point in the domain and at every time step. This allows the model to calculate the onset of a breaking wave the moment it happens, and without knowing anything about the wave a priori. The application of the breaking criteria at every point in the domain and at every time step requires the phase velocity to be calculated instantaneously everywhere in the domain and at every time step. This is achieved by calculating the instantaneous phase velocity using the Hilbert transform and dispersion relation. A comparison between more traditional crest-tracking techniques shows the calculation of phase velocity using Hilbert transform at the location of the breaking wave crest provides a good approximation of crest velocity. The ability of the selected wave breaking criteria to predict single and multiple breaking events in two dimensions is validated by a series of large-scale experiments. Breaking waves are generated by energy focusing and modulational instability methods, with a wide range of primary frequencies. Steep irregular waves which lead to breaking waves, and irregular waves with an energy focusing wave superimposed are also generated. This set of

Metaproteomics of cellulose methanisation under thermophilic conditions reveals a surprisingly high proteolytic activity.

Science.gov (United States)

Lü, Fan; Bize, Ariane; Guillot, Alain; Monnet, Véronique; Madigou, Céline; Chapleur, Olivier; Mazéas, Laurent; He, Pinjing; Bouchez, Théodore

2014-01-01

Cellulose is the most abundant biopolymer on Earth. Optimising energy recovery from this renewable but recalcitrant material is a key issue. The metaproteome expressed by thermophilic communities during cellulose anaerobic digestion was investigated in microcosms. By multiplying the analytical replicates (65 protein fractions analysed by MS/MS) and relying solely on public protein databases, more than 500 non-redundant protein functions were identified. The taxonomic community structure as inferred from the metaproteomic data set was in good overall agreement with 16S rRNA gene tag pyrosequencing and fluorescent in situ hybridisation analyses. Numerous functions related to cellulose and hemicellulose hydrolysis and fermentation catalysed by bacteria related to Caldicellulosiruptor spp. and Clostridium thermocellum were retrieved, indicating their key role in the cellulose-degradation process and also suggesting their complementary action. Despite the abundance of acetate as a major fermentation product, key methanogenesis enzymes from the acetoclastic pathway were not detected. In contrast, enzymes from the hydrogenotrophic pathway affiliated to Methanothermobacter were almost exclusively identified for methanogenesis, suggesting a syntrophic acetate oxidation process coupled to hydrogenotrophic methanogenesis. Isotopic analyses confirmed the high dominance of the hydrogenotrophic methanogenesis. Very surprising was the identification of an abundant proteolytic activity from Coprothermobacter proteolyticus strains, probably acting as scavenger and/or predator performing proteolysis and fermentation. Metaproteomics thus appeared as an efficient tool to unravel and characterise metabolic networks as well as ecological interactions during methanisation bioprocesses. More generally, metaproteomics provides direct functional insights at a limited cost, and its attractiveness should increase in the future as sequence databases are growing exponentially.

Distinct medial temporal networks encode surprise during motivation by reward versus punishment

OpenAIRE

Murty, Vishnu P.; LaBar, Kevin S.; Adcock, R. Alison

2016-01-01

Adaptive motivated behavior requires predictive internal representations of the environment, and surprising events are indications for encoding new representations of the environment. The medial temporal lobe memory system, including the hippocampus and surrounding cortex, encodes surprising events and is influenced by motivational state. Because behavior reflects the goals of an individual, we investigated whether motivational valence (i.e., pursuing rewards versus avoiding punishments) also...

A Shocking Surprise in Stephan's Quintet

Science.gov (United States)

2006-01-01

This false-color composite image of the Stephan's Quintet galaxy cluster clearly shows one of the largest shock waves ever seen (green arc). The wave was produced by one galaxy falling toward another at speeds of more than one million miles per hour. The image is made up of data from NASA's Spitzer Space Telescope and a ground-based telescope in Spain. Four of the five galaxies in this picture are involved in a violent collision, which has already stripped most of the hydrogen gas from the interiors of the galaxies. The centers of the galaxies appear as bright yellow-pink knots inside a blue haze of stars, and the galaxy producing all the turmoil, NGC7318b, is the left of two small bright regions in the middle right of the image. One galaxy, the large spiral at the bottom left of the image, is a foreground object and is not associated with the cluster. The titanic shock wave, larger than our own Milky Way galaxy, was detected by the ground-based telescope using visible-light wavelengths. It consists of hot hydrogen gas. As NGC7318b collides with gas spread throughout the cluster, atoms of hydrogen are heated in the shock wave, producing the green glow. Spitzer pointed its infrared spectrograph at the peak of this shock wave (middle of green glow) to learn more about its inner workings. This instrument breaks light apart into its basic components. Data from the instrument are referred to as spectra and are displayed as curving lines that indicate the amount of light coming at each specific wavelength. The Spitzer spectrum showed a strong infrared signature for incredibly turbulent gas made up of hydrogen molecules. This gas is caused when atoms of hydrogen rapidly pair-up to form molecules in the wake of the shock wave. Molecular hydrogen, unlike atomic hydrogen, gives off most of its energy through vibrations that emit in the infrared. This highly disturbed gas is the most turbulent molecular hydrogen ever seen. Astronomers were surprised not only by the turbulence

Gauge symmetry breaking

International Nuclear Information System (INIS)

Weinberg, S.

1976-01-01

The problem of how gauge symmetries of the weak interactions get broken is discussed. Some reasons why such a heirarchy of gauge symmetry breaking is needed, the reason gauge heirarchies do not seem to arise in theories of a given and related type, and the implications of theories with dynamical symmetry breaking, which can exhibit a gauge hierarchy

Rule Making and Rule Breaking: Game Development and the Governance of Emergent Behaviour

Directory of Open Access Journals (Sweden)

Jennifer R. Whitson

2010-07-01

Full Text Available Discussions of ‘control’ in games often center on players and their myriad attempts to push back upon the systems that seek to constrain them. The fact that players resist the constraints imposed upon them is not surprising, nor is it surprising that counterplay and control are such rich topics for game studies academics. In this article, I argue that players are invited by games to bend the rules. It is in the very nature of play to find the movement between the rules, and for many players the ‘fun’ in play is the inherent challenge of attempting to master, defeat, or remake games’ formal structures. These rationalities of play preclude blind obedience to the rules and have distinct implications for how games are governed. While there have been numerous studies of players who bend or break the rules (Consalvo, 2007; Foo and Koivisto, 2004; Dibbell, 1998; Kolko and Reid, 1998; Williams, 2006; Mnookin, 1997 and players who alter and re-make the rules in their role of co-producers (Sotamaa, 2009; Kücklich, 2005; Humphreys, 2005; Taylor, 2006b, there is little research on game development companies and their attempts to harness these rationalities of play and uphold the rules beyond the reflexive writings of game designers themselves (Curtis, 1992; Morningstar and Farmer, 1991; Koster, 2002.

Dynamic breaking of a single gold bond

DEFF Research Database (Denmark)

Pobelov, Ilya V.; Lauritzen, Kasper Primdal; Yoshida, Koji

2017-01-01

While one might assume that the force to break a chemical bond gives a measure of the bond strength, this intuition is misleading. If the force is loaded slowly, thermal fluctuations may break the bond before it is maximally stretched, and the breaking force will be less than the bond can sustain...... of a single Au-Au bond and show that the breaking force is dependent on the loading rate. We probe the temperature and structural dependencies of breaking and suggest that the paradox can be explained by fast breaking of atomic wires and slow breaking of point contacts giving very similar breaking forces....

Electroweak breaking in supersymmetric models

CERN Document Server

Ibáñez, L E

1992-01-01

We discuss the mechanism for electroweak symmetry breaking in supersymmetric versions of the standard model. After briefly reviewing the possible sources of supersymmetry breaking, we show how the required pattern of symmetry breaking can automatically result from the structure of quantum corrections in the theory. We demonstrate that this radiative breaking mechanism works well for a heavy top quark and can be combined in unified versions of the theory with excellent predictions for the running couplings of the model. (To be published in ``Perspectives in Higgs Physics'', G. Kane editor.)

Managing Uncertainity: Soviet Views on Deception, Surprise, and Control

National Research Council Canada - National Science Library

Hull, Andrew

1989-01-01

.... In the first two cases (deception and surprise), the emphasis is on how the Soviets seek to sow uncertainty in the minds of the enemy and how the Soviets then plan to use that uncertainty to gain military advantage...

Simulation of breaking waves using the high-order spectral method with laboratory experiments: wave-breaking energy dissipation

Science.gov (United States)

Seiffert, Betsy R.; Ducrozet, Guillaume

2018-01-01

We examine the implementation of a wave-breaking mechanism into a nonlinear potential flow solver. The success of the mechanism will be studied by implementing it into the numerical model HOS-NWT, which is a computationally efficient, open source code that solves for the free surface in a numerical wave tank using the high-order spectral (HOS) method. Once the breaking mechanism is validated, it can be implemented into other nonlinear potential flow models. To solve for wave-breaking, first a wave-breaking onset parameter is identified, and then a method for computing wave-breaking associated energy loss is determined. Wave-breaking onset is calculated using a breaking criteria introduced by Barthelemy et al. (J Fluid Mech https://arxiv.org/pdf/1508.06002.pdf, submitted) and validated with the experiments of Saket et al. (J Fluid Mech 811:642-658, 2017). Wave-breaking energy dissipation is calculated by adding a viscous diffusion term computed using an eddy viscosity parameter introduced by Tian et al. (Phys Fluids 20(6): 066,604, 2008, Phys Fluids 24(3), 2012), which is estimated based on the pre-breaking wave geometry. A set of two-dimensional experiments is conducted to validate the implemented wave breaking mechanism at a large scale. Breaking waves are generated by using traditional methods of evolution of focused waves and modulational instability, as well as irregular breaking waves with a range of primary frequencies, providing a wide range of breaking conditions to validate the solver. Furthermore, adjustments are made to the method of application and coefficient of the viscous diffusion term with negligible difference, supporting the robustness of the eddy viscosity parameter. The model is able to accurately predict surface elevation and corresponding frequency/amplitude spectrum, as well as energy dissipation when compared with the experimental measurements. This suggests the model is capable of calculating wave-breaking onset and energy dissipation

A CCR2 macrophage endocytic pathway mediates extravascular fibrin clearance in vivo

DEFF Research Database (Denmark)

Motley, Michael P; Madsen, Daniel H; Jürgensen, Henrik J

2016-01-01

cellular endocytosis and lysosomal targeting, revealing a novel intracellular pathway for extravascular fibrin degradation. A C-C chemokine receptor type 2 (CCR2)-positive macrophage subpopulation constituted the majority of fibrin-uptaking cells. Consequently, cellular fibrin uptake was diminished...... by elimination of CCR2-expressing cells. The CCR2-positive macrophage subtype was different from collagen-internalizing M2-like macrophages. Cellular fibrin uptake was strictly dependent on plasminogen and plasminogen activator. Surprisingly, however, fibrin endocytosis was unimpeded by the absence of the fibrin...... subsets of macrophages employing distinct molecular pathways....

Circumpolar Deep Water transport and current structure at the Amundsen Sea shelf break

Science.gov (United States)

Assmann, Karen M.; Wåhlin, Anna K.; Heywood, Karen J.; Jenkins, Adrian; Kim, Tae Wan; Lee, Sang Hoon

2017-04-01

The West Antarctic Ice Sheet has been losing mass at an increasing rate over the past decades. Ocean heat transport to the ice-ocean interface has been identified as an important contributor to this mass loss and the role it plays in ice sheet stability makes it crucial to understand its drivers in order to make accurate future projections of global sea level. While processes closer to the ice-ocean interface modulate this heat transport, its ultimate source is located in the deep basin off the continental shelf as a core of relatively warm, salty water underlying a colder, fresher shallow surface layer. To reach the marine terminating glaciers and the base of floating ice shelves, this warm, salty water mass must cross the bathymetric obstacle of the shelf break. Glacial troughs that intersect the Amundsen shelf break and deepen southwards towards the ice shelf fronts have been shown to play an important role in transporting warm, salty Circumpolar Deep Water (CDW) towards the ice shelves. North of the shelf break, circulation in the Amundsen Sea occupies an intermediate regime between the eastward Antarctic Circumpolar Current that impinges on the shelf break in the Bellingshausen Sea and the westward southern limb of the Ross Gyre that follows the shelf break in the Ross Sea. Hydrographic and mooring observations and numerical model results at the mouth of the central shelf break trough leading to Pine Island and Thwaites Glaciers show a westward wind-driven shelf break current overlying an eastward undercurrent that turns onto the shelf in the trough. It is thought that the existence of the latter feature facilitates the on-shelf transport of CDW. A less clearly defined shelf break depression further west acts as the main pathway for CDW to Dotson and eastern Getz Ice shelves. Model results indicate that a similar eastward undercurrent exists here driving the on-shelf transport of CDW. Two moorings on the upper slope east of the trough entrance show a

Critical pathways of change in fruit export regions at desert margin (Chile)

DEFF Research Database (Denmark)

Frederiksen, Peter

The purpose is to elucidate how critical pathways function in a fruit export region at the desert margin in Chile. The region was investigated at the system level as an open land system with managed fruit plantations in a geographically complex valley. Data collection procedures included total...... change changed pathways. Pathways resulted from a combination of global value chains, the adoption of innovations, past climate change, and regional conditions at different scales. Main pathways of change were upgrade and downgrade of the fruit export region and irrigation systems, whereas the breaking...... areas and not in others. The probable future is expected to be increased separation of intraregional pathways and a more imbalanced region. The conclusion is that openness is the main property responsible for critical pathways of change in the region....

Molecular dynamics simulation of a DNA containing a single strand break

Energy Technology Data Exchange (ETDEWEB)

Yamaguchi, H.; Siebers, G.; Furukawa, A.; Otagiri, N.; Osman, R

2002-07-01

Molecular dynamics simulations were performed for a dodecamer DNA containing a single strand break (SSB), which has been represented by a 3'-OH deoxyribose and 5'-OH phosphate in the middle of the strand. Molecular force field parameters of the 5'-OH phosphate region were determined from an ab initio calculation at the HF/6-31G level using the program package GAMESS. The DNA was placed in a periodic boundary box with water molecules and Na+ counter-ions to produce a neutralised system. After minimisation, the system was heated to 300 K, equilibrated and a production run at constant NTP was executed for 1 ns using AMBER 4.1. Snapshots of the SSB-containing DNA and a detailed analysis of the equilibriated average structure revealed surprisingly small conformational changes compared to normal DNA. However, dynamic properties calculated using the essential dynamics method showed some features that may be important for the recognition of this damage by repair enzymes. (author)

Dual descriptions of supersymmetry breaking

International Nuclear Information System (INIS)

Intrilligator, K.; Thomas, S.

1996-08-01

Dynamical supersymmetry breaking is considered in models which admit descriptions in terms of electric, confined, or magnetic degrees of freedom in various limits. In this way, a variety of seemingly different theories which break supersymmetry are actually interrelated by confinement or duality. Specific examples are given in which there are two dual descriptions of the supersymmetry breaking ground state

R-parity breaking phenomenology

International Nuclear Information System (INIS)

Vissani, F.

1996-02-01

We review various features of the R-parity breaking phenomenology, with particular attention to the low energy observables, and to the patterns of the R-parity breaking interactions that arise in Grand Unified models. (author). 22 refs, 1 fig., 3 tabs

Effects of surprisal and locality on Danish sentence processing

DEFF Research Database (Denmark)

Balling, Laura Winther; Kizach, Johannes

2017-01-01

An eye-tracking experiment in Danish investigates two dominant accounts of sentence processing: locality-based theories that predict a processing advantage for sentences where the distance between the major syntactic heads is minimized, and the surprisal theory which predicts that processing time...

CRA-1 uncovers a double-strand break-dependent pathway promoting the assembly of central region proteins on chromosome axes during C. elegans meiosis.

Science.gov (United States)

Smolikov, Sarit; Schild-Prüfert, Kristina; Colaiácovo, Mónica P

2008-06-06

The synaptonemal complex (SC), a tripartite proteinaceous structure that forms between homologous chromosomes during meiosis, is crucial for faithful chromosome segregation. Here we identify CRA-1, a novel and conserved protein that is required for the assembly of the central region of the SC during C. elegans meiosis. In the absence of CRA-1, central region components fail to extensively localize onto chromosomes at early prophase and instead mostly surround the chromatin at this stage. Later in prophase, central region proteins polymerize along chromosome axes, but for the most part fail to connect the axes of paired homologous chromosomes. This defect results in an inability to stabilize homologous pairing interactions, altered double-strand break (DSB) repair progression, and a lack of chiasmata. Surprisingly, DSB formation and repair are required to promote the polymerization of the central region components along meiotic chromosome axes in cra-1 mutants. In the absence of both CRA-1 and any one of the C. elegans homologs of SPO11, MRE11, RAD51, or MSH5, the polymerization observed along chromosome axes is perturbed, resulting in the formation of aggregates of the SC central region proteins. While radiation-induced DSBs rescue this polymerization in cra-1; spo-11 mutants, they fail to do so in cra-1; mre-11, cra-1; rad-51, and cra-1; msh-5 mutants. Taken together, our studies place CRA-1 as a key component in promoting the assembly of a tripartite SC structure. Moreover, they reveal a scenario in which DSB formation and repair can drive the polymerization of SC components along chromosome axes in C. elegans.

Comparison of the DVI line break LOCA with the equivalent cold leg break with the ATLAS facility

International Nuclear Information System (INIS)

Choi, K. Y.; Cho, S.; Kang, K. H.; Park, H. S.; Kim, Y. S.; Baek, W. P.

2010-01-01

The APR1400 (Advanced Power Reactor, 1400 MWe) adopts a DVI (Direct Vessel Injection) method for ECC (Emergency Core Cooling) water delivery rather than a conventional CLI (Cold Leg Injection) method as an advanced safety feature. The break scenario of one DVI nozzle is taken into account in the small break LOCA analysis. Transient behavior during the DVI line breaks needs to be investigated and compared with the equivalent break on the cold leg. An 8.5-inch double-ended break of one DVI nozzle was simulated with the ATLAS, and a counterpart test for the DVI break was performed at the cold leg with the equivalent break size for comparison. This comparison will contribute to enhancing a comprehensive understanding of the thermal hydraulic behavior during transients. A constructed integral effect database is also used to validate the existing conservative safety analysis methodology and to develop a best-estimate safety analysis methodology for small-break LOCAs. A post-test calculation was performed with a best-estimate safety analysis code, MARS 3.1, in order to examine its prediction capability and to identify any code deficiencies for thermal hydraulic phenomena occurring during the transient. (authors)

The Break

DEFF Research Database (Denmark)

Strand, Anete Mikkala Camille

2018-01-01

storytelling to enact fruitful breakings of patterns unbecoming. The claim being, that the hamster wheel of Work-life anno 2016 needs reconfiguration and the simple yet fruitful manner by which this is done is through acknowledging the benefits of bodies, spaces and artifacts – and the benefits of actually...... taking a break, discontinuing for a moment in order to continue better, wiser and more at ease. Both within and as part of the daily routines, and – now and then – outside these routines in the majesty of nature with time to explore and redirect the course of life in companionships with fellow man...

Lie-algebra approach to symmetry breaking

International Nuclear Information System (INIS)

Anderson, J.T.

1981-01-01

A formal Lie-algebra approach to symmetry breaking is studied in an attempt to reduce the arbitrariness of Lagrangian (Hamiltonian) models which include several free parameters and/or ad hoc symmetry groups. From Lie algebra it is shown that the unbroken Lagrangian vacuum symmetry can be identified from a linear function of integers which are Cartan matrix elements. In broken symmetry if the breaking operators form an algebra then the breaking symmetry (or symmetries) can be identified from linear functions of integers characteristic of the breaking symmetries. The results are applied to the Dirac Hamiltonian of a sum of flavored fermions and colored bosons in the absence of dynamical symmetry breaking. In the partially reduced quadratic Hamiltonian the breaking-operator functions are shown to consist of terms of order g 2 , g, and g 0 in the color coupling constants and identified with strong (boson-boson), medium strong (boson-fermion), and fine-structure (fermion-fermion) interactions. The breaking operators include a boson helicity operator in addition to the familiar fermion helicity and ''spin-orbit'' terms. Within the broken vacuum defined by the conventional formalism, the field divergence yields a gauge which is a linear function of Cartan matrix integers and which specifies the vacuum symmetry. We find that the vacuum symmetry is chiral SU(3) x SU(3) and the axial-vector-current divergence gives a PCAC -like function of the Cartan matrix integers which reduces to PCAC for SU(2) x SU(2) breaking. For the mass spectra of the nonets J/sup P/ = 0 - ,1/2 + ,1 - the integer runs through the sequence 3,0,-1,-2, which indicates that the breaking subgroups are the simple Lie groups. Exact axial-vector-current conservation indicates a breaking sum rule which generates octet enhancement. Finally, the second-order breaking terms are obtained from the second-order spin tensor sum of the completely reduced quartic Hamiltonian

Structural Break Tests Robust to Regression Misspecification

Directory of Open Access Journals (Sweden)

Alaa Abi Morshed

2018-05-01

Full Text Available Structural break tests for regression models are sensitive to model misspecification. We show—analytically and through simulations—that the sup Wald test for breaks in the conditional mean and variance of a time series process exhibits severe size distortions when the conditional mean dynamics are misspecified. We also show that the sup Wald test for breaks in the unconditional mean and variance does not have the same size distortions, yet benefits from similar power to its conditional counterpart in correctly specified models. Hence, we propose using it as an alternative and complementary test for breaks. We apply the unconditional and conditional mean and variance tests to three US series: unemployment, industrial production growth and interest rates. Both the unconditional and the conditional mean tests detect a break in the mean of interest rates. However, for the other two series, the unconditional mean test does not detect a break, while the conditional mean tests based on dynamic regression models occasionally detect a break, with the implied break-point estimator varying across different dynamic specifications. For all series, the unconditional variance does not detect a break while most tests for the conditional variance do detect a break which also varies across specifications.

Double strand break repair: two mechanisms in competition but tightly linked to cell cycle

International Nuclear Information System (INIS)

Delacote, F.

2002-11-01

DNA double strand breaks (DSB) are highly toxic damage although they can be induced to create genetic diversity. Two distinct pathways can repair DSB: Homologous Recombination (HR) and Non Homologous End Joining (NHEJ). If un- or mis-repaired, this damage can lead to cancer. Thus, it is essential to investigate how these two pathways are regulated for DSB repair. NHEJ inhibition leads to HR DSB repair stimulation. However, this channeling to HR is tightly linked to cell cycle since NHEJ and HR are active in G1/early S and late S/G2, respectively. Our results suggest that G1-unrepaired DSB go through S phase to be repaired by HR in G2. Those results allow a better understanding of DSB repair mechanisms regulation. (author)

Time-lapse crystallography snapshots of a double-strand break repair polymerase in action.

Science.gov (United States)

Jamsen, Joonas A; Beard, William A; Pedersen, Lars C; Shock, David D; Moon, Andrea F; Krahn, Juno M; Bebenek, Katarzyna; Kunkel, Thomas A; Wilson, Samuel H

2017-08-15

DNA polymerase (pol) μ is a DNA-dependent polymerase that incorporates nucleotides during gap-filling synthesis in the non-homologous end-joining pathway of double-strand break repair. Here we report time-lapse X-ray crystallography snapshots of catalytic events during gap-filling DNA synthesis by pol μ. Unique catalytic intermediates and active site conformational changes that underlie catalysis are uncovered, and a transient third (product) metal ion is observed in the product state. The product manganese coordinates phosphate oxygens of the inserted nucleotide and PP i . The product metal is not observed during DNA synthesis in the presence of magnesium. Kinetic analyses indicate that manganese increases the rate constant for deoxynucleoside 5'-triphosphate insertion compared to magnesium. The likely product stabilization role of the manganese product metal in pol μ is discussed. These observations provide insight on structural attributes of this X-family double-strand break repair polymerase that impact its biological function in genome maintenance.DNA polymerase (pol) μ functions in DNA double-strand break repair. Here the authors use time-lapse X-ray crystallography to capture the states of pol µ during the conversion from pre-catalytic to product complex and observe a third transiently bound metal ion in the product state.

Role of Double-Strand Break End-Tethering during Gene Conversion in Saccharomyces cerevisiae.

Directory of Open Access Journals (Sweden)

Suvi Jain

2016-04-01

Full Text Available Correct repair of DNA double-strand breaks (DSBs is critical for maintaining genome stability. Whereas gene conversion (GC-mediated repair is mostly error-free, repair by break-induced replication (BIR is associated with non-reciprocal translocations and loss of heterozygosity. We have previously shown that a Recombination Execution Checkpoint (REC mediates this competition by preventing the BIR pathway from acting on DSBs that can be repaired by GC. Here, we asked if the REC can also determine whether the ends that are engaged in a GC-compatible configuration belong to the same break, since repair involving ends from different breaks will produce potentially deleterious translocations. We report that the kinetics of repair are markedly delayed when the two DSB ends that participate in GC belong to different DSBs (termed Trans compared to the case when both DSB ends come from the same break (Cis. However, repair in Trans still occurs by GC rather than BIR, and the overall efficiency of repair is comparable. Hence, the REC is not sensitive to the "origin" of the DSB ends. When the homologous ends for GC are in Trans, the delay in repair appears to reflect their tethering to sequences on the other side of the DSB that themselves recombine with other genomic locations with which they share sequence homology. These data support previous observations that the two ends of a DSB are usually tethered to each other and that this tethering facilitates both ends encountering the same donor sequence. We also found that the presence of homeologous/repetitive sequences in the vicinity of a DSB can distract the DSB end from finding its bona fide homologous donor, and that inhibition of GC by such homeologous sequences is markedly increased upon deleting Sgs1 but not Msh6.

9 CFR 590.522 - Breaking room operations.

Science.gov (United States)

2010-01-01

... personnel. (m) Ingredients and additives used in, or for, processing egg products, shall be handled in a..., Processing, and Facility Requirements § 590.522 Breaking room operations. (a) The breaking room shall be kept... clean and reasonably dry during breaking operations and free of egg meat and shells. (b) All breaking...

The DNA-dependent protein kinase: a multifunctional protein kinase with roles in DNA double strand break repair and mitosis

Science.gov (United States)

Jette, Nicholas; Lees-Miller, Susan P.

2015-01-01

The DNA-dependent protein kinase (DNA-PK) is a serine/threonine protein kinase composed of a large catalytic subunit (DNA-PKcs) and the Ku70/80 heterodimer. Over the past two decades, significant progress has been made in elucidating the role of DNA-PK in non-homologous end joining (NHEJ), the major pathway for repair of ionizing radiation-induced DNA double strand breaks in human cells and recently, additional roles for DNA-PK have been reported. In this review, we will describe the biochemistry, structure and function of DNA-PK, its roles in DNA double strand break repair and its newly described roles in mitosis and other cellular processes. PMID:25550082

Surprise and Memory as Indices of Concrete Operational Development

Science.gov (United States)

Achenbach, Thomas M.

1973-01-01

Normal and retarded children's use of color, number, length and continuous quantity as attributes of identification was assessed by presenting them with contrived changes in three properties. Surprise and correct memory responses for color preceded those to number, which preceded logical verbal responses to a conventional number-conservation task.…

Rock breaking methods to replace blasting

Science.gov (United States)

Zhou, Huisheng; Xie, Xinghua; Feng, Yuqing

2018-03-01

The method of breaking rock by blasting has a high efficiency and the cost is relatively low, but the associated vibration, flyrock, production of toxic gases since the 1970’s, the Western developed countries began to study the safety of breaking rock. This paper introduces different methods and their progress to safely break rock. Ideally, safe rock breaking would have little vibration, no fly stone, and no toxic gases, which can be widely used in municipal engineering, road excavation, high-risk mining, quarrying and complex environment.

Research progress on dam-break floods

KAUST Repository

Wu, Jiansong; Bao, Kai; Zhang, Hui

2011-01-01

Because of the catastrophic effects downstream of dam-break failure, more and more researchers around the world have been working on the study of dam-break flows to accurately forecast the downstream inundation mapping. With the rapid development of computer hardware and computing techniques, numerical study on dam-break flows has been a popular research subject. In the paper, the numerical methodologies used to solve the governing partial differential equations of dam-break flows are classified and summarized, and their characteristics and applications are discussed respectively. Furthermore, the fully-developed mathematical models developed in recent decades are reviewed, and also introduced the authors' on-going work. Finally, some possible future developments on modeling the dam-break flows and some solutions are presented and discussed. © 2011 IEEE.

Research progress on dam-break floods

KAUST Repository

Wu, Jiansong

2011-08-01

Because of the catastrophic effects downstream of dam-break failure, more and more researchers around the world have been working on the study of dam-break flows to accurately forecast the downstream inundation mapping. With the rapid development of computer hardware and computing techniques, numerical study on dam-break flows has been a popular research subject. In the paper, the numerical methodologies used to solve the governing partial differential equations of dam-break flows are classified and summarized, and their characteristics and applications are discussed respectively. Furthermore, the fully-developed mathematical models developed in recent decades are reviewed, and also introduced the authors\\' on-going work. Finally, some possible future developments on modeling the dam-break flows and some solutions are presented and discussed. © 2011 IEEE.

Break-glass handling exceptional situations in access control

CERN Document Server

Petritsch, Helmut

2014-01-01

Helmut Petritsch describes the first holistic approach to Break-Glass which covers the whole life-cycle: from access control modeling (pre-access), to logging the security-relevant system state during Break-Glass accesses (at-access), and the automated analysis of Break-Glass accesses (post-access). Break-Glass allows users to override security restrictions in exceptional situations. While several Break-Glass models specific to given access control models have already been discussed in research (e.g., extending RBAC with Break-Glass), the author introduces a generic Break-Glass model. The pres

Poly(ADP-ribose polymerase (PARP-1 is not involved in DNA double-strand break recovery

Directory of Open Access Journals (Sweden)

Fernet Marie

2003-07-01

Full Text Available Abstract Background The cytotoxicity and the rejoining of DNA double-strand breaks induced by γ-rays, H2O2 and neocarzinostatin, were investigated in normal and PARP-1 knockout mouse 3T3 fibroblasts to determine the role of poly(ADP-ribose polymerase (PARP-1 in DNA double-strand break repair. Results PARP-1-/- were considerably more sensitive than PARP-1+/+ 3T3s to induced cell kill by γ-rays and H2O2. However, the two cell lines did not show any significant difference in the susceptibility to neocarzinostatin below 1.5 nM drug. Restoration of PARP-1 expression in PARP-1-/- 3T3s by retroviral transfection of the full PARP-1 cDNA did not induce any change in neocarzinostatin response. Moreover the incidence and the rejoining kinetics of neocarzinostatin-induced DNA double-strand breaks were identical in PARP-1+/+ and PARP-1-/- 3T3s. Poly(ADP-ribose synthesis following γ-rays and H2O2 was observed in PARP-1-proficient cells only. In contrast neocarzinostatin, even at supra-lethal concentration, was unable to initiate PARP-1 activation yet it induced H2AX histone phosphorylation in both PARP1+/+ and PARP-1-/- 3T3s as efficiently as γ-rays and H2O2. Conclusions The results show that PARP-1 is not a major determinant of DNA double-strand break recovery with either strand break rejoining or cell survival as an endpoint. Even though both PARP-1 and ATM activation are major determinants of the cell response to γ-rays and H2O2, data suggest that PARP-1-dependent poly(ADP-ribose synthesis and ATM-dependent H2AX phosphorylation, are not inter-related in the repair pathway of neocarzinostatin-induced DNA double-strand breaks.

NAD+ salvage pathway in cancer metabolism and therapy.

Science.gov (United States)

Kennedy, Barry E; Sharif, Tanveer; Martell, Emma; Dai, Cathleen; Kim, Youra; Lee, Patrick W K; Gujar, Shashi A

2016-12-01

Nicotinamide adenine dinucleotide (NAD + ) is an essential coenzyme for various physiological processes including energy metabolism, DNA repair, cell growth, and cell death. Many of these pathways are typically dysregulated in cancer cells, making NAD + an intriguing target for cancer therapeutics. NAD + is mainly synthesized by the NAD + salvage pathway in cancer cells, and not surprisingly, the pharmacological targeting of the NAD + salvage pathway causes cancer cell cytotoxicity in vitro and in vivo. Several studies have described the precise consequences of NAD + depletion on cancer biology, and have demonstrated that NAD+ depletion results in depletion of energy levels through lowered rates of glycolysis, reduced citric acid cycle activity, and decreased oxidative phosphorylation. Additionally, depletion of NAD + causes sensitization of cancer cells to oxidative damage by disruption of the anti-oxidant defense system, decreased cell proliferation, and initiation of cell death through manipulation of cell signaling pathways (e.g., SIRT1 and p53). Recently, studies have explored the effect of well-known cancer therapeutics in combination with pharmacological depletion of NAD + levels, and found in many cases a synergistic effect on cancer cell cytotoxicity. In this context, we will discuss the effects of NAD + salvage pathway inhibition on cancer cell biology and provide insight on this pathway as a novel anti-cancer therapeutic target. Copyright © 2016 Elsevier Ltd. All rights reserved.

The Ku Heterodimer and the Metabolism of Single-Ended DNA Double-Strand Breaks

Directory of Open Access Journals (Sweden)

Alessia Balestrini

2013-06-01

Full Text Available Single-ended double-strand breaks (DSBs are a common form of spontaneous DNA break, generated when the replisome encounters a discontinuity in the DNA template. Given their prevalence, understanding the mechanisms governing the fate(s of single-ended DSBs is important. We describe the influence of the Ku heterodimer and Mre11 nuclease activity on processing of single-ended DSBs. Separation-of-function alleles of yku70 were derived that phenocopy Ku deficiency with respect to single-ended DSBs but remain proficient for NHEJ. The Ku mutants fail to regulate Exo1 activity, and bypass the requirement for Mre11 nuclease activity in the repair of camptothecin-induced single-ended DSBs. Ku mutants exhibited reduced affinity for DNA ends, manifest as both reduced end engagement and enhanced probability of diffusing inward on linear DNA. This study reveals an interplay between Ku and Mre11 in the metabolism of single-ended DSBs that is distinct from repair pathway choice at double-ended DSBs.

A surprising palmar nevus: A case report

Directory of Open Access Journals (Sweden)

Rana Rafiei

2018-02-01

Full Text Available Raised palmar or plantar nevus especially in white people is an unusual feature. We present an uncommon palmar compound nevus in a 26-year-old woman with a large diameter (6 mm which had a collaret-shaped margin. In histopathologic evaluation intralymphatic protrusions of nevic nests were noted. This case was surprising to us for these reasons: size, shape, location and histopathology of the lesion. Palmar nevi are usually junctional (flat and below 3 mm diameter and intra lymphatic protrusion or invasion in nevi is an extremely rare phenomenon.

Reparation in unicellular green algae during chronic exposure to the action of mutagenic factors. II. Restoration of single-stranded DNA breaks following exposure of Chlamydomonas reinchardii to gamma-irradiation

International Nuclear Information System (INIS)

Sergeeva, S.A.; Ptitsina, S.N.; Shevchenko, V.A.

1986-01-01

The restoration of single-stranded breaks in the DNA in different strains of unicellular green algae (chlamydomonads) during chronic exposure to the action of mutagenic factors following γ-irradiation was investigated. It was shown that the restoration of DNA breaks was most effective in the case of strain M γ/sup mt + /, which is resistant to radiation. Strains, that were sensitive to UV irradiation showed a similar order of DNA break restoration as the wild-type strain. Strain UVS-1 showed a higher level of restoration than the wild-type strain. The data indicated that chlamydomonads have different pathways of reparation, which lead to the restoration of breaks induced by γ-irradiation and UV-rays

Things may not be as expected: Surprising findings when updating ...

African Journals Online (AJOL)

2015-05-14

May 14, 2015 ... Things may not be as expected: Surprising findings when updating .... (done at the end of three months after the first review month) ..... Allen G. Getting beyond form filling: The role of institutional governance in human research ...

Estimations of expectedness and potential surprise in possibility theory

Science.gov (United States)

Prade, Henri; Yager, Ronald R.

1992-01-01

This note investigates how various ideas of 'expectedness' can be captured in the framework of possibility theory. Particularly, we are interested in trying to introduce estimates of the kind of lack of surprise expressed by people when saying 'I would not be surprised that...' before an event takes place, or by saying 'I knew it' after its realization. In possibility theory, a possibility distribution is supposed to model the relative levels of mutually exclusive alternatives in a set, or equivalently, the alternatives are assumed to be rank-ordered according to their level of possibility to take place. Four basic set-functions associated with a possibility distribution, including standard possibility and necessity measures, are discussed from the point of view of what they estimate when applied to potential events. Extensions of these estimates based on the notions of Q-projection or OWA operators are proposed when only significant parts of the possibility distribution are retained in the evaluation. The case of partially-known possibility distributions is also considered. Some potential applications are outlined.

JMJD1C demethylates MDC1 to regulate the RNF8 and BRCA1-mediated chromatin response to DNA breaks

DEFF Research Database (Denmark)

Watanabe, Sugiko; Watanabe, Kenji; Akimov, Vyacheslav

2013-01-01

Chromatin ubiquitylation flanking DNA double-strand breaks (DSBs), mediated by RNF8 and RNF168 ubiquitin ligases, orchestrates a two-branch pathway, recruiting repair factors 53BP1 or the RAP80-BRCA1 complex. We report that human demethylase JMJD1C regulates the RAP80-BRCA1 branch of this DNA...

Supersymmetry breaking with extra dimensions

International Nuclear Information System (INIS)

Zwirner, Fabio

2004-01-01

This talk reviews some aspects of supersymmetry breaking in the presence of extra dimensions. The first part is a general introduction, recalling the motivations for supersymmetry and extra dimensions, as well as some unsolved problems of four-dimensional models of supersymmetry breaking. The central part is a more focused introduction to a mechanism for (super)symmetry breaking, proposed first by Scherk and Schwarz, where extra dimensions play a crucial role. The last part is devoted to the description of some recent results and of some open problems. (author)

Automation surprise : results of a field survey of Dutch pilots

NARCIS (Netherlands)

de Boer, R.J.; Hurts, Karel

2017-01-01

Automation surprise (AS) has often been associated with aviation safety incidents. Although numerous laboratory studies have been conducted, few data are available from routine flight operations. A survey among a representative sample of 200 Dutch airline pilots was used to determine the prevalence

RPA Stabilization of Single-Stranded DNA Is Critical for Break-Induced Replication.

Science.gov (United States)

Ruff, Patrick; Donnianni, Roberto A; Glancy, Eleanor; Oh, Julyun; Symington, Lorraine S

2016-12-20

DNA double-strand breaks (DSBs) are cytotoxic lesions that must be accurately repaired to maintain genome stability. Replication protein A (RPA) plays an important role in homology-dependent repair of DSBs by protecting the single-stranded DNA (ssDNA) intermediates formed by end resection and by facilitating Rad51 loading. We found that hypomorphic mutants of RFA1 that support intra-chromosomal homologous recombination are profoundly defective for repair processes involving long tracts of DNA synthesis, in particular break-induced replication (BIR). The BIR defects of the rfa1 mutants could be partially suppressed by eliminating the Sgs1-Dna2 resection pathway, suggesting that Dna2 nuclease attacks the ssDNA formed during end resection when not fully protected by RPA. Overexpression of Rad51 was also found to suppress the rfa1 BIR defects. We suggest that Rad51 binding to the ssDNA formed by excessive end resection and during D-loop migration can partially compensate for dysfunctional RPA. Copyright © 2016 The Author(s). Published by Elsevier Inc. All rights reserved.

Models of Automation Surprise: Results of a Field Survey in Aviation

Directory of Open Access Journals (Sweden)

Robert De Boer

2017-09-01

Full Text Available Automation surprises in aviation continue to be a significant safety concern and the community’s search for effective strategies to mitigate them are ongoing. The literature has offered two fundamentally divergent directions, based on different ideas about the nature of cognition and collaboration with automation. In this paper, we report the results of a field study that empirically compared and contrasted two models of automation surprises: a normative individual-cognition model and a sensemaking model based on distributed cognition. Our data prove a good fit for the sense-making model. This finding is relevant for aviation safety, since our understanding of the cognitive processes that govern human interaction with automation drive what we need to do to reduce the frequency of automation-induced events.

NPP Krsko small break LOCA analysis

International Nuclear Information System (INIS)

Mavko, B.; Petelin, S.; Peterlin, G.

1987-01-01

Parametric analysis of small break loss of coolant accident for the Krsko NPP was calculated by using RELAP5/MOD1 computer code. The model that was used in our calculations has been improved over several years and was previously tested in simulation (s) of start-up tests and known NPP Krsko transients. In our calculations we modelled automatic actions initiated by control, safety and protection systems. We also modelled the required operator actions as specified in emergency operating instructions. In small-break LOCA calculations, we varied break sizes in the cold leg. The influence of steam generator tube plugging on small break LOCA accidents was also analysed. (author)

A model for string-breaking in QCD

International Nuclear Information System (INIS)

Antonov, Dmitri; Del Debbio, Luigi; Di Giacomo, Adriano

2003-01-01

We present a model for string breaking based on the existence of chromoelectric flux tubes. We predict the form of the long-range potential and obtain an estimate of the string breaking length. A prediction is also obtained for the behaviour with temperature of the string breaking length near the deconfinement phase transition. We plan to use this model as a guide for a program of study of string breaking on the lattice. (author)

The new break-even analysis.

Science.gov (United States)

Laskaris, James; Regan, Katie

2013-12-01

Changes in the economic and legislative environment have complicated the capital acquisition landscape. Hospitals and health systems should: Question the assumptions that underlie their break-even analysis. Revamp the break-even calculator. Engage in discussions about the clinical aspects of equipment and technology acquisition decisions.

Chiral symmetry and chiral-symmetry breaking

International Nuclear Information System (INIS)

Peskin, M.E.

1982-12-01

These lectures concern the dynamics of fermions in strong interaction with gauge fields. Systems of fermions coupled by gauge forces have a very rich structure of global symmetries, which are called chiral symmetries. These lectures will focus on the realization of chiral symmetries and the causes and consequences of thier spontaneous breaking. A brief introduction to the basic formalism and concepts of chiral symmetry breaking is given, then some explicit calculations of chiral symmetry breaking in gauge theories are given, treating first parity-invariant and then chiral models. These calculations are meant to be illustrative rather than accurate; they make use of unjustified mathematical approximations which serve to make the physics more clear. Some formal constraints on chiral symmetry breaking are discussed which illuminate and extend the results of our more explicit analysis. Finally, a brief review of the phenomenological theory of chiral symmetry breaking is presented, and some applications of this theory to problems in weak-interaction physics are discussed

'Jet breaks' and 'missing breaks' in the X-Ray afterglow of Gamma Ray Bursts

CERN Document Server

Dado, Shlomo; De Rújula, Alvaro

2008-01-01

The X-ray afterglows (AGs) of Gamma-Ray Bursts (GRBs) and X-Ray Flashes (XRFs) have, after the fast decline phase of their prompt emission, a temporal behaviour varying between two extremes. A large fraction of these AGs has a 'canonical' light curve which, after an initial shallow-decay 'plateau' phase, 'breaks smoothly' into a fast power-law decline. Very energetic GRBs, contrariwise, appear not to have a 'break', their AG declines like a power-law from the start of the observations. Breaks and 'missing breaks' are intimately related to the geometry and deceleration of the jets responsible for GRBs. In the frame of the 'cannonball' (CB) model of GRBs and XRFs, we analyze the cited extreme behaviours (canonical and pure power-law) and intermediate cases spanning the observed range of X-ray AG shapes. We show that the entire panoply of X-ray light-curve shapes --measured with Swift and other satellites-- are as anticipated, on very limpid grounds, by the CB model. We test the expected correlations between the...

Lifshitz-sector mediated SUSY breaking

International Nuclear Information System (INIS)

Pospelov, Maxim; Tamarit, Carlos

2014-01-01

We propose a novel mechanism of SUSY breaking by coupling a Lorentz-invariant supersymmetric matter sector to non-supersymmetric gravitational interactions with Lifshitz scaling. The improved UV properties of Lifshitz propagators moderate the otherwise uncontrollable ultraviolet divergences induced by gravitational loops. This ensures that both the amount of induced Lorentz violation and SUSY breaking in the matter sector are controlled by Λ HL 2 /M P 2 , the ratio of the Hořava-Lifshitz cross-over scale Λ HL to the Planck scale M P . This ratio can be kept very small, providing a novel way of explicitly breaking supersymmetry without reintroducing fine-tuning. We illustrate our idea by considering a model of scalar gravity with Hořava-Lifshitz scaling coupled to a supersymmetric Wess-Zumino matter sector, in which we compute the two-loop SUSY breaking corrections to the masses of the light scalars due to the gravitational interactions and the heavy fields

Fumarase is involved in DNA double-strand break resection through a functional interaction with Sae2

DEFF Research Database (Denmark)

Leshets, Michael; Ramamurthy, Dharanidharan; Lisby, Michael

2018-01-01

One of the most severe forms of DNA damage is the double-strand break (DSB). Failure to properly repair the damage can cause mutation, gross chromosomal rearrangements and lead to the development of cancer. In eukaryotes, homologous recombination (HR) and non-homologous end joining (NHEJ) are the......One of the most severe forms of DNA damage is the double-strand break (DSB). Failure to properly repair the damage can cause mutation, gross chromosomal rearrangements and lead to the development of cancer. In eukaryotes, homologous recombination (HR) and non-homologous end joining (NHEJ......) are the main DSB repair pathways. Fumarase is a mitochondrial enzyme which functions in the tricarboxylic acid cycle. Intriguingly, the enzyme can be readily detected in the cytosolic compartment of all organisms examined, and we have shown that cytosolic fumarase participates in the DNA damage response...

ORMS IN SURPRISING PLACES: CLINICAL AND MORPHOLOGICAL FEATURES

Directory of Open Access Journals (Sweden)

Myroshnychenko MS

2013-06-01

Full Text Available Helminthes are the most common human diseases, which are characterized by involvement in the pathological process of all organs and systems. In this article, the authors discuss a few cases of typical and atypical localizations for parasitic worms such as filarial and pinworms which were recovered from surprising places in the bodies of patients in Kharkiv region. This article will allow the doctors of practical health care to pay special attention to the timely prevention and diagnostics of this pathology.

Supersymmetry breaking from superstrings

International Nuclear Information System (INIS)

Gaillard, M.K.

1990-05-01

The gauge hierarchy problem is briefly reviewed and a class of effective field theories obtained from superstrings is described. These are characterized by a classical symmetry, related to the space-time duality of string theory, that is responsible for the suppression of observable supersymmetry breaking effects. At the quantum level, the symmetry is broken by anomalies that provide the seed of observable supersymmetry breaking, and an acceptably large gauge hierarchy may be generated. 26 refs

Supersymmetry breaking from superstrings

International Nuclear Information System (INIS)

Gaillard, M.K.; Lawrence Berkeley Lab., CA; California Univ., Berkeley

1990-01-01

The gauge hierarchy problem is briefly reviewed and a class of effective field theories obtained from superstrings is described. These are characterized by a clasical symmetry, related to the space-time duality of string theory, that is responsible for the suppression of observable supersymmetry breaking effects. At the quantum level, the symmetry is broken by anomalies that provide the seed of observable supersymmetry breaking, and an acceptably large gauge hierarchy may be generated

Primary Care Practice: Uncertainty and Surprise

Science.gov (United States)

Crabtree, Benjamin F.

I will focus my comments on uncertainty and surprise in primary care practices. I am a medical anthropologist by training, and have been a full-time researcher in family medicine for close to twenty years. In this talk I want to look at primary care practices as complex systems, particularly taking the perspective of translating evidence into practice. I am going to discuss briefly the challenges we have in primary care, and in medicine in general, of translating new evidence into the everyday care of patients. To do this, I will look at two studies that we have conducted on family practices, then think about how practices can be best characterized as complex adaptive systems. Finally, I will focus on the implications of this portrayal for disseminating new knowledge into practice.

Computational simulation of chromosome breaks in human liver

International Nuclear Information System (INIS)

Yang Jianshe; Li Wenjian; Jin Xiaodong

2006-01-01

An easy method was established for computing chromosome breaks in cells exposed to heavily charged particles. The cell chromosome break value by 12 C +6 ions was theoretically calculated, and was tested with experimental data of chromosome breaks by using a premature chromosome condensation technique. The theoretical chromosome break value agreed well with the experimental data. The higher relative biological effectiveness of the heavy ions was closely correlated to its physical characteristics. In addition, the chromosome break value can be predicted off line. (authors)

The Ku heterodimer and the metabolism of single-ended DNA double-strand breaks.

Science.gov (United States)

Balestrini, Alessia; Ristic, Dejan; Dionne, Isabelle; Liu, Xiao Z; Wyman, Claire; Wellinger, Raymund J; Petrini, John H J

2013-06-27

Single-ended double-strand breaks (DSBs) are a common form of spontaneous DNA break, generated when the replisome encounters a discontinuity in the DNA template. Given their prevalence, understanding the mechanisms governing the fate(s) of single-ended DSBs is important. We describe the influence of the Ku heterodimer and Mre11 nuclease activity on processing of single-ended DSBs. Separation-of-function alleles of yku70 were derived that phenocopy Ku deficiency with respect to single-ended DSBs but remain proficient for NHEJ. The Ku mutants fail to regulate Exo1 activity, and bypass the requirement for Mre11 nuclease activity in the repair of camptothecin-induced single-ended DSBs. Ku mutants exhibited reduced affinity for DNA ends, manifest as both reduced end engagement and enhanced probability of diffusing inward on linear DNA. This study reveals an interplay between Ku and Mre11 in the metabolism of single-ended DSBs that is distinct from repair pathway choice at double-ended DSBs. Copyright © 2013 The Authors. Published by Elsevier Inc. All rights reserved.

What is a surprise earthquake? The example of the 2002, San Giuliano (Italy event

Directory of Open Access Journals (Sweden)

M. Mucciarelli

2005-06-01

Full Text Available Both in scientific literature and in the mass media, some earthquakes are defined as «surprise earthquakes». Based on his own judgment, probably any geologist, seismologist or engineer may have his own list of past «surprise earthquakes». This paper tries to quantify the underlying individual perception that may lead a scientist to apply such a definition to a seismic event. The meaning is different, depending on the disciplinary approach. For geologists, the Italian database of seismogenic sources is still too incomplete to allow for a quantitative estimate of the subjective degree of belief. For seismologists, quantification is possible defining the distance between an earthquake and its closest previous neighbor. Finally, for engineers, the San Giuliano quake could not be considered a surprise, since probabilistic site hazard estimates reveal that the change before and after the earthquake is just 4%.

Life forms employ different repair strategies of repair single- and double strand DNA breaks caused by different qualities of radiation: criticality of RecA mediated repair system

International Nuclear Information System (INIS)

Sharan, R.N.

2013-01-01

Different qualities of radiation, either through direct or indirect pathway, induce qualitative different spectrum of damages in DNA, which are also different in in vitro and in vivo systems. The single- and double strand breaks of DNA are of special interest as they lead to serious biological consequences. The implications of such damage to DNA and their processing by various inherent repair pathways together decide the fate of the living form

Gauge unification, non-local breaking, open strings

International Nuclear Information System (INIS)

Trapletti, M.

2005-01-01

The issue of non-local GUT symmetry breaking is addressed in the context of open string model building. We study Z N xZ M ' orbifolds with all the GUT-breaking orbifold elements acting freely, as rotations accompanied by translations in the internal space. We consider open strings quantized on these backgrounds, distinguishing whether the translational action is parallel or perpendicular to the D-branes. GUT breaking is impossible in the purely perpendicular case, non-local GUT breaking is instead allowed in the purely parallel case. In the latter, the scale of breaking is set by the compactification moduli, and there are no fixed points with reduced gauge symmetry, where dangerous explicit GUT-breaking terms could be located. We investigate the mixed parallel+perpendicular case in a Z 2 xZ 2 ' example, having also a simplified field theory realization. It is a new S 1 /Z 2 xZ 2 ' orbifold-GUT model, with bulk gauge symmetry SU(5)xSU(5) broken locally to the Standard Model gauge group. In spite of the locality of the GUT symmetry breaking, there is no localized contribution to the running of the coupling constants, and the unification scale is completely set by the length of S 1

Analysis of physiological signals for recognition of boredom, pain, and surprise emotions.

Science.gov (United States)

Jang, Eun-Hye; Park, Byoung-Jun; Park, Mi-Sook; Kim, Sang-Hyeob; Sohn, Jin-Hun

2015-06-18

The aim of the study was to examine the differences of boredom, pain, and surprise. In addition to that, it was conducted to propose approaches for emotion recognition based on physiological signals. Three emotions, boredom, pain, and surprise, are induced through the presentation of emotional stimuli and electrocardiography (ECG), electrodermal activity (EDA), skin temperature (SKT), and photoplethysmography (PPG) as physiological signals are measured to collect a dataset from 217 participants when experiencing the emotions. Twenty-seven physiological features are extracted from the signals to classify the three emotions. The discriminant function analysis (DFA) as a statistical method, and five machine learning algorithms (linear discriminant analysis (LDA), classification and regression trees (CART), self-organizing map (SOM), Naïve Bayes algorithm, and support vector machine (SVM)) are used for classifying the emotions. The result shows that the difference of physiological responses among emotions is significant in heart rate (HR), skin conductance level (SCL), skin conductance response (SCR), mean skin temperature (meanSKT), blood volume pulse (BVP), and pulse transit time (PTT), and the highest recognition accuracy of 84.7% is obtained by using DFA. This study demonstrates the differences of boredom, pain, and surprise and the best emotion recognizer for the classification of the three emotions by using physiological signals.

Bonding pathways of high-pressure chemical transformations

International Nuclear Information System (INIS)

Hu Anguang; Zhang Fan

2013-01-01

A three-stage bonding pathway towards high-pressure chemical transformations from molecular precursors or intermediate states has been identified by first-principles simulations. With the evolution of principal stress tensor components in the response of chemical bonding to compressive loading, the three stages can be defined as the van der Waals bonding destruction, a bond breaking and forming reaction, and equilibrium of new bonds. The three-stage bonding pathway leads to the establishment of a fundamental principle of chemical bonding under compression. It reveals that during high-pressure chemical transformation, electrons moving away from functional groups follow anti-addition, collision-free paths to form new bonds in counteracting the local stress confinement. In applying this principle, a large number of molecular precursors were identified for high-pressure chemical transformations, resulting in new materials. (fast track communication)

Oil prices: Breaks and trends

International Nuclear Information System (INIS)

Noguera, José

2013-01-01

This paper contributes to the literature of the stationarity of financial time series and the literature on oil and macroeconomics in several ways. First, it uses Kejriwal and Perron (2010) sequential procedure to endogenously determine multiple structural changes in real oil prices without facing the circular testing problem between structural changes and stationary assumptions of previous tests. Second, it performs a diagnostic check to detect the significance and magnitude of the potential breaks. Third, it uses the above information to test for the existence of stochastic trends in real oil prices, and fourth, it speculates about possible explanations for the break dates found in order to encourage further work and discussions. The exercise uses monthly data from January 1861 to August 2011. - Highlights: ► The model endogenously determine multiple structural changes in real oil prices. ► The methods used does not face the circular testing problem. ► It also detect the significance and magnitude of the breaks detected. ► It tests for the existence of stochastic trends. ► It explains the reasons for the break dates found

Climate and floods still govern California levee breaks

Science.gov (United States)

Florsheim, J.L.; Dettinger, M.D.

2007-01-01

Even in heavily engineered river systems, climate still governs flood variability and thus still drives many levee breaks and geomorphic changes. We assemble a 155-year record of levee breaks for a major California river system to find that breaks occurred in 25% of years during the 20th Century. A relation between levee breaks and river discharge is present that sets a discharge threshold above which most levee breaks occurred. That threshold corresponds to small floods with recurrence intervals of ???2-3 years. Statistical analysis illustrates that levee breaks and peak discharges cycle (broadly) on a 12-15 year time scale, in time with warm-wet storm patterns in California, but more slowly or more quickly than ENSO and PDO climate phenomena, respectively. Notably, these variations and thresholds persist through the 20th Century, suggesting that historical flood-control effects have not reduced the occurrence or frequency of levee breaks. Copyright 2007 by the American Geophysical Union.

Radiative breaking of cosmologically acceptable grand unified theories

International Nuclear Information System (INIS)

Gato, B.; Leon, J.; Quiros, M.

1984-01-01

We present a cosmologically acceptable grand unified model where the breaking of SU(5) proceeds through radiative corrections induced by supergravity soft-breaking terms. The breaking scale is determined by dimensional transmutation. The model is compatible with the radiative breaking of SU(2)sub(L)xU(1)sub(Y) which provides an experimentally accessible low energy particle spectrum and small top quark mass. (orig.)

Teacher Supply and Demand: Surprises from Primary Research

Directory of Open Access Journals (Sweden)

Andrew J. Wayne

2000-09-01

Full Text Available An investigation of primary research studies on public school teacher supply and demand revealed four surprises. Projections show that enrollments are leveling off. Relatedly, annual hiring increases should be only about two or three percent over the next few years. Results from studies of teacher attrition also yield unexpected results. Excluding retirements, only about one in 20 teachers leaves each year, and the novice teachers who quit mainly cite personal and family reasons, not job dissatisfaction. Each of these findings broadens policy makers' options for teacher supply.

Strong Electroweak Symmetry Breaking

CERN Document Server

Grinstein, Benjamin

2011-01-01

Models of spontaneous breaking of electroweak symmetry by a strong interaction do not have fine tuning/hierarchy problem. They are conceptually elegant and use the only mechanism of spontaneous breaking of a gauge symmetry that is known to occur in nature. The simplest model, minimal technicolor with extended technicolor interactions, is appealing because one can calculate by scaling up from QCD. But it is ruled out on many counts: inappropriately low quark and lepton masses (or excessive FCNC), bad electroweak data fits, light scalar and vector states, etc. However, nature may not choose the minimal model and then we are stuck: except possibly through lattice simulations, we are unable to compute and test the models. In the LHC era it therefore makes sense to abandon specific models (of strong EW breaking) and concentrate on generic features that may indicate discovery. The Technicolor Straw Man is not a model but a parametrized search strategy inspired by a remarkable generic feature of walking technicolor,...

Breaking gold nano-junctions simulation and analysis

DEFF Research Database (Denmark)

Lauritzen, Kasper Primdal

, to predict the structure of a gold junction just as it breaks. This method is based on artificial neural networks and can be used on experimental data, even when it is trained purely on simulated data. The method is extended to other types of experimental traces, where it is trained without the use......Simulating the movements of individual atoms allows us to look at and investigate the physical processes that happen in an experiment. In this thesis I use simulations to support and improve experimental studies of breaking gold nano-junctions. By using molecular dynamics to study gold nanowires, I...... can investigate their breaking forces under varying conditions, like stretching rate or temperature. This resolves a confusion in the literature, where the breaking forces of two different breaking structures happen to coincide. The correlations between the rupture and reformation of a gold junction...

Dynamical study of symmetries: breaking and restauration

International Nuclear Information System (INIS)

Schuck, P.

1986-09-01

First symmetry breaking (spontaneous) is explained and the physical implication discussed for infinite systems. The relation with phase transitions is indicated. Then the specific aspects of symmetry breaking in finite systems is treated and illustrated in detail for the case of translational invariance with the help of an oversimplified but exactly solvable model. The method of projection (restauration of symmetry) is explained for the static case and also applied to the model. Symmetry breaking in the dynamical case and for instance the notion of a soft mode responsible for the symmetry breaking is discussed in the case of superfluidity and another exactly solvable model is introduced. The Goldstone mode is treated in detail. Some remarks on analogies with the breaking of chiral symmetry are made. Some recent developments in the theory of symmetry restauration are briefly outlined [fr

Conference of “Uncertainty and Surprise: Questions on Working with the Unexpected and Unknowable”

CERN Document Server

McDaniel, Reuben R; Uncertainty and Surprise in Complex Systems : Questions on Working with the Unexpected

2005-01-01

Complexity science has been a source of new insight in physical and social systems and has demonstrated that unpredictability and surprise are fundamental aspects of the world around us. This book is the outcome of a discussion meeting of leading scholars and critical thinkers with expertise in complex systems sciences and leaders from a variety of organizations sponsored by the Prigogine Center at The University of Texas at Austin and the Plexus Institute to explore strategies for understanding uncertainty and surprise. Besides distributions to the conference it includes a key digest by the editors as well as a commentary by the late nobel laureat Ilya Prigogine, "Surprises in half of a century". The book is intended for researchers and scientists in complexity science as well as for a broad interdisciplinary audience of both practitioners and scholars. It will well serve those interested in the research issues and in the application of complexity science to physical and social systems.

Routinizing Breaking News

DEFF Research Database (Denmark)

Hartley, Jannie Møller

2011-01-01

This chapter revisits seminal theoretical categorizations of news proposed three decades earlier by US sociologist Gaye Tuchman. By exploring the definition of ”breaking news” in the contemporary online newsrooms of three Danish news organisations, the author offers us a long overdue re-theorizat......-theorization of journalistic practice in the online context and helpfully explores well-evidenced limitations to online news production, such as the relationship between original reporting and the use of ”shovelware.”......This chapter revisits seminal theoretical categorizations of news proposed three decades earlier by US sociologist Gaye Tuchman. By exploring the definition of ”breaking news” in the contemporary online newsrooms of three Danish news organisations, the author offers us a long overdue re...

Models of Automation surprise : results of a field survey in aviation

NARCIS (Netherlands)

De Boer, Robert; Dekker, Sidney

2017-01-01

Automation surprises in aviation continue to be a significant safety concern and the community’s search for effective strategies to mitigate them are ongoing. The literature has offered two fundamentally divergent directions, based on different ideas about the nature of cognition and collaboration

Breaking bad news in cancer patients.

Science.gov (United States)

Konstantis, Apostolos; Exiara, Triada

2015-01-01

In a regional hospital, many patients are newly diagnosed with cancer. Breaking the bad news in these patients and their relatives is a tough task. Many doctors are not experienced in talking to patients about death or death-related diseases. In recent years, there have been great efforts to change the current situation. The aim of this study was to investigate the experience and education of medical personnel in breaking bad news in a secondary hospital. 59 doctors from General Hospital of Komotini, Greece were included in the study. All the doctors were in clinical specialties that treated cancer patients. A brief questionnaire was developed based on current guidelines such as Baile/SPIKES framework and the ABCDE mnemonic. Residents are involved in delivering bad news less frequently than specialists. Only 21 doctors (35.59%) had specific training on breaking bad news. 20 doctors (33.90%) were aware of the available techniques and protocols on breaking bad news. 47 doctors (79.66%) had a consistent plan for breaking bad news. 57 (96.61%) delivered bad news in a quiet place, 53 (89.83%) ensured no interruptions and enough time, 53 (89.83%) used simple words and 54 (91.53%) checked for understanding and did not rush through the news. 46 doctors (77.97%) allowed relatives to determine patient's knowledge about the disease. There were low rates of specific training in breaking bad news. However, the selected location, the physician's speech and their plan were according to current guidelines.

MAP kinase pathways in the yeast Saccharomyces cerevisiae

Science.gov (United States)

Gustin, M. C.; Albertyn, J.; Alexander, M.; Davenport, K.; McIntire, L. V. (Principal Investigator)

1998-01-01

A cascade of three protein kinases known as a mitogen-activated protein kinase (MAPK) cascade is commonly found as part of the signaling pathways in eukaryotic cells. Almost two decades of genetic and biochemical experimentation plus the recently completed DNA sequence of the Saccharomyces cerevisiae genome have revealed just five functionally distinct MAPK cascades in this yeast. Sexual conjugation, cell growth, and adaptation to stress, for example, all require MAPK-mediated cellular responses. A primary function of these cascades appears to be the regulation of gene expression in response to extracellular signals or as part of specific developmental processes. In addition, the MAPK cascades often appear to regulate the cell cycle and vice versa. Despite the success of the gene hunter era in revealing these pathways, there are still many significant gaps in our knowledge of the molecular mechanisms for activation of these cascades and how the cascades regulate cell function. For example, comparison of different yeast signaling pathways reveals a surprising variety of different types of upstream signaling proteins that function to activate a MAPK cascade, yet how the upstream proteins actually activate the cascade remains unclear. We also know that the yeast MAPK pathways regulate each other and interact with other signaling pathways to produce a coordinated pattern of gene expression, but the molecular mechanisms of this cross talk are poorly understood. This review is therefore an attempt to present the current knowledge of MAPK pathways in yeast and some directions for future research in this area.

Explanatory models of health and disease: surprises from within the former Soviet Union

Directory of Open Access Journals (Sweden)

Tatiana I Andreeva

2013-06-01

Full Text Available Extract The review of anthropological theories as applied to public health by Jennifer J. Carroll (Carroll, 2013 published in this issue of TCPHEE made me recollect my first and most surprising discoveries of how differently same things can be understood in different parts of the world. Probably less unexpectedly, these impressions concern substance abuse and addiction behaviors, similarly to many examples deployed by Jennifer J. Carroll. The first of these events happened soon after the break-up of the Soviet Union when some of the most active people from the West rushed to discover what was going on behind the opening iron curtain. A director of an addiction clinic, who had just come into contact with a Dutch counterpart, invited me to join the collaboration and the innovation process he planned to launch. Being a participant of the exchange program started within this collaboration, I had an opportunity to discover how addictive behaviors were understood and explained in books (English, 1961; Kooyman, 1992; Viorst, 1986 recommended by the colleagues in the Netherlands and, as I could observe with my own eyes, addressed in everyday practice. This was a jaw-dropping contrast to what I learnt at the soviet medical university and some post-graduate courses, where all the diseases related to alcohol, tobacco, or drug abuse were considered predominantly a result of the substance intake. In the Soviet discourse, the intake itself was understood as 'willful and deliberate' or immoral behavior which, in some cases, was to be rectified in prison-like treatment facilities. In the West, quite oppositely, substance abuse was seen rather as a consequence of a constellation of life-course adversities thoroughly considered by developmental psychology. This approach was obviously deeply ingrained in how practitioners diagnosed and treated their patients.

1,4 Naphthoquinone protects radiation induced cell death and DNA damage in lymphocytes by activation Nrf2/are pathway and enhancing DNA repair

Energy Technology Data Exchange (ETDEWEB)

Khan, Nazir M; Sandur, Santosh K; Checker, Rahul; Sharma, Deepak; Poduval, T.B., E-mail: nazirbiotech@rediffmail.com [Radiation Biology and Health Sciences Division, Bhabha Atomic Research Centre, Mumbai (India)

2012-07-01

1,4-Naphthoquinone (NQ) is the parent molecule of many clinically approved anticancer, anti-infective, and antiparasitic drugs such as anthracycline, mitomycin, daunorubicin, doxorubicin, diospyrin, and malarone. Presence of NQ during a-irradiation (4Gy) significantly reduced the death of irradiated murine splenic lymphocytes in a dose dependent manner (0.05-liM), with complete protection at liM as assessed by PI staining. Radioprotection by NQ was further confirmed by inhibition of caspase activation, decrease in cell size, DNA-fragmentation, nuclear-blebbing and clonogenic assay. All trans retinoic acid which is inhibitor of Nrf-2 pathway, completely abrogated the radioprotective effect of NQ, suggesting that radioprotective activity of NQ may be due to activation of Nrf-2 signaling pathways. Further, addition of NQ to lymphocytes activated Nrf-2 in time dependent manner as shown by confocal microscopy, electrophoretic mobility shift assay and quantitative real time PCR. It also increased the expression of Nrf-2 dependent cytoprotective genes like hemeoxygenase-1, MnSOD, catalse as demonstrated by real time PCR and flowcytometry. NQ protected lymphocytes significantly against radiation-induced cell death even when added after irradiation. Complete protection was observed by addition of NQ up to 2 h after irradiation. However, percentage protection decreased with increasing time interval. These results suggested that NQ may offer protection to lymphocytes activating repair pathways. Repair of radiation induced DNA strand breaks was studied by comet assay. Pretreatment of lymphocytes with NQ induced single strand breaks up to 6h but not double strand breaks in DNA. However, NQ mediated single strand breaks were repaired completely at longer time intervals. Addition of NQ to lymphocytes prior to 4 Gy a-radiation exposure showed decrease in the yield of DNA double strand breaks. The observed time-dependent decrease in the DNA strand breaks could be attributed to

Yukawa unification in moduli-dominant SUSY breaking

International Nuclear Information System (INIS)

Khalil, S.; Tatsuo Kobayashi

1997-07-01

We study Yukawa in string models with moduli-dominant SUSY breaking. This type of SUSY breaking in general leads to non-universal soft masses, i.e. soft scalar masses and gaugino masses. Such non-universality is important for phenomenological aspects of Yukawa unification, i.e., successful electroweak breaking, SUSY corrections to the bottom mass and the branching ratio of b → sγ. We show three regions in the whole parameter space which lead to successful electroweak breaking and allow small SUSY corrections to the bottom mass. For these three regions we investigated the b → sγ decay and mass spectra. (author). 26 refs, 6 figs

“Surprise Gift” Purchases of Small Electric Appliances: A Pilot Study

NARCIS (Netherlands)

J. Vanhamme (Joëlle); C.J.P.M. de Bont (Cees)

2005-01-01

textabstractUnderstanding decision-making processes for gifts is of strategic importance for companies selling small electrical appliances as gifts account for a large part of their sales. Among all gifts, the ones that are surprising are the most valued by recipients. However, research about

Jet simulations and gamma-ray burst afterglow jet breaks

NARCIS (Netherlands)

van Eerten, H.J.; Meliani, Z.; Wijers, R.A.M.J.; Keppens, R.

2011-01-01

The conventional derivation of the gamma-ray burst afterglow jet break time uses only the blast wave fluid Lorentz factor and therefore leads to an achromatic break. We show that in general gamma-ray burst afterglow jet breaks are chromatic across the self-absorption break. Depending on

Jet simulations and gamma-ray burst afterglow jet breaks

NARCIS (Netherlands)

van Eerten, H. J.; Meliani, Z.; Wijers, R.A.M.J.; Keppens, R.

2010-01-01

The conventional derivation of the gamma-ray burst afterglow jet break time uses only the blast wave fluid Lorentz factor and therefore leads to an achromatic break. We show that in general gamma-ray burst afterglow jet breaks are chromatic across the self-absorption break. Depending on

DNA breaks and repair in interstitial telomere sequences: Influence of chromatin structure; Etude des cassures de l'ADN et des mecanismes de reparation dans les sequences telomeriques interstitielles: Influence de la structure chromatinienne

Energy Technology Data Exchange (ETDEWEB)

Revaud, D.

2009-06-15

Interstitial Telomeric Sequences (ITS) are over-involved in spontaneous and radiationinduced chromosome aberrations in chinese hamster cells. We have performed a study to investigate the origin of their instability, spontaneously or after low doses irradiation. Our results demonstrate that ITS have a particular chromatin structure: short nucleotide repeat length, less compaction of the 30 nm chromatin fiber, presence of G-quadruplex structures. These features would modulate breaks production and would favour the recruitment of alternative DNA repair mechanisms, which are prone to produce chromosome aberrations. These pathways could be at the origin of chromosome aberrations in ITS whereas NHEJ and HR Double Strand Break repair pathways are rather required for a correct repair in these regions. (author)

Surprising results: HIV testing and changes in contraceptive practices among young women in Malawi

Science.gov (United States)

Sennott, Christie; Yeatman, Sara

2015-01-01

This study uses eight waves of data from the population-based Tsogolo la Thanzi study (2009–2011) in rural Malawi to examine changes in young women’s contraceptive practices, including the use of condoms, non-barrier contraceptive methods, and abstinence, following positive and negative HIV tests. The analysis factors in women’s prior perceptions of their HIV status that may already be shaping their behaviour and separates surprise HIV test results from those that merely confirm what was already believed. Fixed effects logistic regression models show that HIV testing frequently affects the contraceptive practices of young Malawian women, particularly when the test yields an unexpected result. Specifically, women who are surprised to test HIV positive increase their condom use and are more likely to use condoms consistently. Following an HIV negative test (whether a surprise or expected), women increase their use of condoms and decrease their use of non-barrier contraceptives; the latter may be due to an increase in abstinence following a surprise negative result. Changes in condom use following HIV testing are robust to the inclusion of potential explanatory mechanisms including fertility preferences, relationship status, and the perception that a partner is HIV positive. The results demonstrate that both positive and negative tests can influence women’s sexual and reproductive behaviours, and emphasise the importance of conceptualizing of HIV testing as offering new information only insofar as results deviate from prior perceptions of HIV status. PMID:26160156

Skills Associated with Line Breaks in Elite Rugby Union

Directory of Open Access Journals (Sweden)

Steve den Hollander, James Brown, Michael Lambert, Paul Treu, Sharief Hendricks

2016-09-01

Full Text Available The ability of the attacking team to break through the defensive line is a key indicator of success as it creates opportunities to score tries. The aim of this study was to analyse line breaks and identify the associated skills and playing characteristics. The 2013 Super Rugby season (125 games was analysed, in which 362 line breaks were identified and coded using variables that assessed team patterns and non-contact attacking skills in the phases preceding the line break. There was an average of 3 line breaks per game, with 39% of line breaks resulting in a try. Line breaks occurred when the ball-carrier was running fast [61%, x2(4 = 25.784, p = 0.000, Cramer’s v = 0.1922, weak]. At a moderate distance, short lateral passes (19% and skip passes (15% attributed to the highest percentage of line breaks [x2(26 = 50.899, p = 0.036, Cramer’s v = 0.2484, moderate]. Faster defensive line speeds resulted in more line breaks [x2(12 = 61.703, p < 0.001, Cramer’s v = 0.3026, moderate]. Line breaks are associated with overall team success and try scoring opportunities. Awareness of the defenders line speed and depth, fast running speed when receiving the ball and quick passing between attackers to the outside backs creates line break opportunities. During training, coaches should emphasise the movement speed of the ball between attackers and manipulate the speed and distance of the defenders.

DNA double strand break repair pathway plays a significant role in determining the radiotherapy induced normal tissue toxicity among head-and-neck and breast cancer

International Nuclear Information System (INIS)

Sadashiva, Satish Rao Bola; Mumbrekar, Kamalesh Dattaram; Venkatesh, Goutham Hassan; Fernandes, Donald Jerard; Bejadi, Vadhiraja Manjunath; Kapaettu, Satyamoorthy

2014-01-01

The ability to predict individual risk of radiotherapy induced normal tissue complications prior to the therapy may give an opportunity to personalize the treatment aiming improved therapeutic effect and quality of life. Therefore, predicting the risk of developing acute reactions before the initiation of radiation therapy may serve as a potential biomarker. DNA double-strand break (DSB) induction and its repair kinetics in lymphocytes of Head-and-Neck (n = 183) and Breast cancer (n = 132) patients undergoing chemoradiation or radiation therapy alone were analyzed by performing γ-H2AX foci, neutral comet and a modified neutral filter elution assay. Candidate radioresponsive genes like DNA repair, antioxidant pathway, profibrotic cytokine genes were screened for the common variants for their association with normal tissue toxicity outcome. Patients were stratified as non-over responders (NOR) and over responders (OR) based on their Radiation Therapy Oncology Group grading for normal tissue adverse reactions. Our results suggest that DSB repair plays a major role in the development of normal tissue adverse reactions in H and N and Breast cancer patients. The cellular (γ-H2AX analysis) and SNP analysis may have the potential to be developed into a clinically useful predictive assay for identifying the normal tissue over reactors

Charge-symmetry-breaking nucleon form factors

International Nuclear Information System (INIS)

Kubis, Bastian

2011-01-01

A quantitative understanding of charge-symmetry breaking is an increasingly important ingredient for the extraction of the nucleon’s strange vector form factors. We review the theoretical understanding of the charge-symmetry-breaking form factors, both for single nucleons and for 4 He.

Implications of career break from personal and company perspectives

OpenAIRE

Vuorinen, Niina

2017-01-01

The objective of this study is to show the implications that career breaks have on individuals and employers. The intensions are to identify personal motivations for career breaks, and if the breaks change the careers of the people taking them. Furthermore, this study intends to understand how career breaks are viewed by employers, and if career breaks are becoming more acceptable internationally. The theoretical framework was based on description of work and careers both from employee an...

Breaking bad news in cancer patients

Directory of Open Access Journals (Sweden)

Apostolos Konstantis

2015-01-01

Full Text Available Objective: In a regional hospital, many patients are newly diagnosed with cancer. Breaking the bad news in these patients and their relatives is a tough task. Many doctors are not experienced in talking to patients about death or death-related diseases. In recent years, there have been great efforts to change the current situation. The aim of this study was to investigate the experience and education of medical personnel in breaking bad news in a secondary hospital. Materials and Methods: 59 doctors from General Hospital of Komotini, Greece were included in the study. All the doctors were in clinical specialties that treated cancer patients. A brief questionnaire was developed based on current guidelines such as Baile/SPIKES framework and the ABCDE mnemonic. Results: Residents are involved in delivering bad news less frequently than specialists. Only 21 doctors (35.59% had specific training on breaking bad news. 20 doctors (33.90% were aware of the available techniques and protocols on breaking bad news. 47 doctors (79.66% had a consistent plan for breaking bad news. 57 (96.61% delivered bad news in a quiet place, 53 (89.83% ensured no interruptions and enough time, 53 (89.83% used simple words and 54 (91.53% checked for understanding and did not rush through the news. 46 doctors (77.97% allowed relatives to determine patient′s knowledge about the disease. Conclusions: There were low rates of specific training in breaking bad news. However, the selected location, the physician′s speech and their plan were according to current guidelines.

Duality, exchange-degeneracy breaking, and exotic states

International Nuclear Information System (INIS)

Goldstein, G.R.; Haridas, P.

1979-01-01

We study the connection between exchange-degeneracy breaking and multiquark states within the framework of a highly constrained dual approach. We show that M 4 (baryonium) states emerge at the daughter trajectory level as a consequence of small exchange-degeneracy breaking in the meson-meson system (approx.delta) and larger exchange-degeneracy breaking of the baryon trajectories in the meson-baryon system (approx.epsilon). The M 4 states are coupled weakly to external mesons in proportion to the breaking parameter delta. Assuming M 4 couplings to B-barB channels are strong, as determined by duality with normal mesons in the B-barB system, consistency requires epsilon approx. √delta-bar, thereby relating the larger breaking of baryon trajectories to the violation of the Okubo-Zweig-Iizuka-type rule for M 4 . It is shown that exotic baryon states, B 5 , also emerge from this scheme at the daughter level and that dibaryons will appear at the second daughter level

Rotational Symmetry Breaking in Baby Skyrme Models

Science.gov (United States)

Karliner, Marek; Hen, Itay

We discuss one of the most interesting phenomena exhibited by baby skyrmions - breaking of rotational symmetry. The topics we will deal with here include the appearance of rotational symmetry breaking in the static solutions of baby Skyrme models, both in flat as well as in curved spaces, the zero-temperature crystalline structure of baby skyrmions, and finally, the appearance of spontaneous breaking of rotational symmetry in rotating baby skyrmions.

Charge-symmetry-breaking nucleon form factors

Energy Technology Data Exchange (ETDEWEB)

Kubis, Bastian, E-mail: kubis@hiskp.uni-bonn.de [Universitaet Bonn, Helmholtz-Institut fuer Strahlen- und Kernphysik (Theorie) and Bethe Center for Theoretical Physics (Germany)

2011-11-15

A quantitative understanding of charge-symmetry breaking is an increasingly important ingredient for the extraction of the nucleon's strange vector form factors. We review the theoretical understanding of the charge-symmetry-breaking form factors, both for single nucleons and for {sup 4}He.

Push back to respond better: regulatory inhibition of the DNA double-strand break response.

Science.gov (United States)

Panier, Stephanie; Durocher, Daniel

2013-10-01

Single DNA lesions such as DNA double-strand breaks (DSBs) can cause cell death or trigger genome rearrangements that have oncogenic potential, and so the pathways that mend and signal DNA damage must be highly sensitive but, at the same time, selective and reversible. When initiated, boundaries must be set to restrict the DSB response to the site of the lesion. The integration of positive and, crucially, negative control points involving post-translational modifications such as phosphorylation, ubiquitylation and acetylation is key for building fast, effective responses to DNA damage and for mitigating the impact of DNA lesions on genome integrity.

Ku recruits XLF to DNA double-strand breaks.

Science.gov (United States)

Yano, Ken-ichi; Morotomi-Yano, Keiko; Wang, Shih-Ya; Uematsu, Naoya; Lee, Kyung-Jong; Asaithamby, Aroumougame; Weterings, Eric; Chen, David J

2008-01-01

XRCC4-like factor (XLF)--also known as Cernunnos--has recently been shown to be involved in non-homologous end-joining (NHEJ), which is the main pathway for the repair of DNA double-strand breaks (DSBs) in mammalian cells. XLF is likely to enhance NHEJ by stimulating XRCC4-ligase IV-mediated joining of DSBs. Here, we report mechanistic details of XLF recruitment to DSBs. Live cell imaging combined with laser micro-irradiation showed that XLF is an early responder to DSBs and that Ku is essential for XLF recruitment to DSBs. Biochemical analysis showed that Ku-XLF interaction occurs on DNA and that Ku stimulates XLF binding to DNA. Unexpectedly, XRCC4 is dispensable for XLF recruitment to DSBs, although photobleaching analysis showed that XRCC4 stabilizes the binding of XLF to DSBs. Our observations showed the direct involvement of XLF in the dynamic assembly of the NHEJ machinery and provide mechanistic insights into DSB recognition.

Role of XRCC4 phosphorylation by DNA-PK in the regulation of NHEJ repair pathway of DNA double strand break

International Nuclear Information System (INIS)

Sharma, Mukesh Kumar; Imamichi, Shoji; Fukuchi, Mikoto; Kamdar, Radhika P.; Sicheng, Liu; Wanotayan, Rujira; Matsumoto, Yoshihisa

2014-01-01

Non-homologous end-joining (NHEJ) is the predominant pathway of DNA double strand breaks in higher eukaryotes and is active throughout the cell cycle. NHEJ repair includes many factors as Ku70/86, DNA-PKcs, XRCC4-Ligase IV complex and XLF (also known as Cernunnos). In these factors, DNA-PKcs acts as central regulator in NHEJ repair. It recruited at the DNA damages site after DNA damage and after association with Ku its kinase activity is activated. It phosphorylates many of important NHEJ proteins in vitro including XRCC4, Ku 70/86, Artemis, and even DNA-PKcs but till now, very less studies have been done to know the role and significance of phosphorylation in the NHEJ repair. Studies by other researchers identified various phosphorylation sites in XRCC4 by DNA-PK using mass spectrometry but these phosphorylation sites were shown to be dispensable for DSB repair. In the present investigation, we identified 3 serine and one new threonine phosphorylation sites in XRCC4 protein by DNA-PK. In vivo phosphorylation at these sites was verified by generating phosphorylation specific antibodies and the requirement for DNA-PK therein was verified by using DNA-PK inhibitor and DNA-PK proficient and deficient cell lines in response to radiation and zeocin treatment. We have also found that phosphorylation at these sites showed dose dependency in response to radiation treatment. The two serine and one threonine phosphorylation site is also biological important as their mutation into alanine significantly elevated radiosensitivity as measured by colony formation assay. Neutral comet assay showed delayed kinetics in DSB repair of these mutants. Furthermore, we have found a protein, with putative DSB repair function, which interacts with domain including the phosphorylation sites.These results indicate that these phosphorylation sites would mediate functional link between XRCC4 and DNA-PK. (author)

A simple biosynthetic pathway for large product generation from small substrate amounts

Science.gov (United States)

Djordjevic, Marko; Djordjevic, Magdalena

2012-10-01

A recently emerging discipline of synthetic biology has the aim of constructing new biosynthetic pathways with useful biological functions. A major application of these pathways is generating a large amount of the desired product. However, toxicity due to the possible presence of toxic precursors is one of the main problems for such production. We consider here the problem of generating a large amount of product from a potentially toxic substrate. To address this, we propose a simple biosynthetic pathway, which can be induced in order to produce a large number of the product molecules, by keeping the substrate amount at low levels. Surprisingly, we show that the large product generation crucially depends on fast non-specific degradation of the substrate molecules. We derive an optimal induction strategy, which allows as much as three orders of magnitude increase in the product amount through biologically realistic parameter values. We point to a recently discovered bacterial immune system (CRISPR/Cas in E. coli) as a putative example of the pathway analysed here. We also argue that the scheme proposed here can be used not only as a stand-alone pathway, but also as a strategy to produce a large amount of the desired molecules with small perturbations of endogenous biosynthetic pathways.

A simple biosynthetic pathway for large product generation from small substrate amounts

Energy Technology Data Exchange (ETDEWEB)

Djordjevic, Marko [Institute of Physiology and Biochemistry, Faculty of Biology, University of Belgrade (Serbia); Djordjevic, Magdalena [Institute of Physics Belgrade, University of Belgrade (Serbia)

2012-10-01

A recently emerging discipline of synthetic biology has the aim of constructing new biosynthetic pathways with useful biological functions. A major application of these pathways is generating a large amount of the desired product. However, toxicity due to the possible presence of toxic precursors is one of the main problems for such production. We consider here the problem of generating a large amount of product from a potentially toxic substrate. To address this, we propose a simple biosynthetic pathway, which can be induced in order to produce a large number of the product molecules, by keeping the substrate amount at low levels. Surprisingly, we show that the large product generation crucially depends on fast non-specific degradation of the substrate molecules. We derive an optimal induction strategy, which allows as much as three orders of magnitude increase in the product amount through biologically realistic parameter values. We point to a recently discovered bacterial immune system (CRISPR/Cas in E. coli) as a putative example of the pathway analysed here. We also argue that the scheme proposed here can be used not only as a stand-alone pathway, but also as a strategy to produce a large amount of the desired molecules with small perturbations of endogenous biosynthetic pathways. (paper)

A simple biosynthetic pathway for large product generation from small substrate amounts

International Nuclear Information System (INIS)

Djordjevic, Marko; Djordjevic, Magdalena

2012-01-01

A recently emerging discipline of synthetic biology has the aim of constructing new biosynthetic pathways with useful biological functions. A major application of these pathways is generating a large amount of the desired product. However, toxicity due to the possible presence of toxic precursors is one of the main problems for such production. We consider here the problem of generating a large amount of product from a potentially toxic substrate. To address this, we propose a simple biosynthetic pathway, which can be induced in order to produce a large number of the product molecules, by keeping the substrate amount at low levels. Surprisingly, we show that the large product generation crucially depends on fast non-specific degradation of the substrate molecules. We derive an optimal induction strategy, which allows as much as three orders of magnitude increase in the product amount through biologically realistic parameter values. We point to a recently discovered bacterial immune system (CRISPR/Cas in E. coli) as a putative example of the pathway analysed here. We also argue that the scheme proposed here can be used not only as a stand-alone pathway, but also as a strategy to produce a large amount of the desired molecules with small perturbations of endogenous biosynthetic pathways. (paper)

The PINK1-Parkin pathway is involved in the regulation of mitochondrial remodeling process

International Nuclear Information System (INIS)

Park, Jeehye; Lee, Gina; Chung, Jongkyeong

2009-01-01

The two Parkinson's disease (PD) genes, PTEN-induced kinase 1 (PINK1) and parkin, are linked in a common pathway which affects mitochondrial integrity and function. However, it is still not known what this pathway does in the mitochondria. Therefore, we investigated its physiological function in Drosophila. Because Drosophila PINK1 and parkin mutants show changes in mitochondrial morphology in both indirect flight muscles and dopaminergic neurons, we here investigated whether the PINK1-Parkin pathway genetically interacts with the regulators of mitochondrial fusion and fission such as Drp1, which promotes mitochondrial fission, and Opa1 or Marf, which induces mitochondrial fusion. Surprisingly, DrosophilaPINK1 and parkin mutant phenotypes were markedly suppressed by overexpression of Drp1 or downregulation of Opa1 or Marf, indicating that the PINK1-Parkin pathway regulates mitochondrial remodeling process in the direction of promoting mitochondrial fission. Therefore, we strongly suggest that mitochondrial fusion and fission process could be a prominent therapeutic target for the treatment of PD.

Controlling break-the-glass through alignment

NARCIS (Netherlands)

Adriansyah, A.; Dongen, van B.F.; Zannone, N.

2013-01-01

Modern IT systems have to deal with unpredictable situations and exceptions more and more often. In contrast, security mechanisms are usually very rigid. Functionality like break-the-glass is thus employed to allow users to bypass security mechanisms in case of emergencies. However, break-the-glass

The hidden X-ray breaks in afterglow light curves

International Nuclear Information System (INIS)

Curran, P. A.; Wijers, R. A. M. J.; Horst, A. J. van der; Starling, R. L. C.

2008-01-01

Gamma-Ray Burst (GRB) afterglow observations in the Swift era have a perceived lack of achromatic jet breaks compared to the BeppoSAX, or pre-Swift era. Specifically, relatively few breaks, consistent with jet breaks, are observed in the X-ray light curves of these bursts. If these breaks are truly missing, it has serious consequences for the interpretation of GRB jet collimation and energy requirements, and the use of GRBs as standard candles.Here we address the issue of X-ray breaks which are possibly 'hidden' and hence the light curves are misinterpreted as being single power-laws. We show how a number of precedents, including GRB 990510 and GRB 060206, exist for such hidden breaks and how, even with the well sampled light curves of the Swift era, these breaks may be left misidentified. We do so by synthesising X-ray light curves and finding general trends via Monte Carlo analysis. Furthermore, in light of these simulations, we discuss how to best identify achromatic breaks in afterglow light curves via multi-wavelength analysis

Lifshitz-sector mediated SUSY breaking

OpenAIRE

Pospelov, MaximDepartment of Physics and Astronomy, University of Victoria, Victoria, BC, V8P 5C2, Canada; Tamarit, Carlos(Perimeter Institute for Theoretical Physics, Waterloo, ON, N2L 2Y5, Canada)

2014-01-01

We propose a novel mechanism of SUSY breaking by coupling a Lorentz-invariant supersymmetric matter sector to non-supersymmetric gravitational interactions with Lifshitz scaling. The improved UV properties of Lifshitz propagators moderate the otherwise uncontrollable ultraviolet divergences induced by gravitational loops. This ensures that both the amount of induced Lorentz violation and SUSY breaking in the matter sector are controlled by $ {{{\\Lambda_{\\mathrm{HL}}^2}} \\left/ {{M_P^2}} \\righ...

A perfectly conducting surface in electrodynamics with Lorentz symmetry breaking

Science.gov (United States)

Borges, L. H. C.; Barone, F. A.

2017-10-01

In this paper we consider a model which exhibits explicit Lorentz symmetry breaking due to the presence of a single background vector v^{μ } coupled to the gauge field. We investigate such a theory in the vicinity of a perfectly conducting plate for different configurations of v^{μ }. First we consider no restrictions on the components of the background vector and we treat it perturbatively up to second order. Next, we treat v^{μ } exactly for two special cases: the first one is when it has only components parallel to the plate, and the second one when it has a single component perpendicular to the plate. For all these configurations, the propagator for the gauge field and the interaction force between the plate and a point-like electric charge are computed. Surprisingly, it is shown that the image method is valid in our model and we argue that it is a non-trivial result. We show there arises a torque on the mirror with respect to its positioning in the background field when it interacts with a point-like charge. It is a new effect with no counterpart in theories with Lorentz symmetry in the presence of a perfect mirror.

A perfectly conducting surface in electrodynamics with Lorentz symmetry breaking

Energy Technology Data Exchange (ETDEWEB)

Borges, L.H.C. [UNESP, Campus de Guaratingueta, DFQ, Guaratingueta, SP (Brazil); Barone, F.A. [IFQ, Universidade Federal de Itajuba, Itajuba, MG (Brazil)

2017-10-15

In this paper we consider a model which exhibits explicit Lorentz symmetry breaking due to the presence of a single background vector v{sup μ} coupled to the gauge field. We investigate such a theory in the vicinity of a perfectly conducting plate for different configurations of v{sup μ}. First we consider no restrictions on the components of the background vector and we treat it perturbatively up to second order. Next, we treat v{sup μ} exactly for two special cases: the first one is when it has only components parallel to the plate, and the second one when it has a single component perpendicular to the plate. For all these configurations, the propagator for the gauge field and the interaction force between the plate and a point-like electric charge are computed. Surprisingly, it is shown that the image method is valid in our model and we argue that it is a non-trivial result. We show there arises a torque on the mirror with respect to its positioning in the background field when it interacts with a point-like charge. It is a new effect with no counterpart in theories with Lorentz symmetry in the presence of a perfect mirror. (orig.)

The effect of emotionally valenced eye region images on visuocortical processing of surprised faces.

Science.gov (United States)

Li, Shuaixia; Li, Ping; Wang, Wei; Zhu, Xiangru; Luo, Wenbo

2018-05-01

In this study, we presented pictorial representations of happy, neutral, and fearful expressions projected in the eye regions to determine whether the eye region alone is sufficient to produce a context effect. Participants were asked to judge the valence of surprised faces that had been preceded by a picture of an eye region. Behavioral results showed that affective ratings of surprised faces were context dependent. Prime-related ERPs with presentation of happy eyes elicited a larger P1 than those for neutral and fearful eyes, likely due to the recognition advantage provided by a happy expression. Target-related ERPs showed that surprised faces in the context of fearful and happy eyes elicited dramatically larger C1 than those in the neutral context, which reflected the modulation by predictions during the earliest stages of face processing. There were larger N170 with neutral and fearful eye contexts compared to the happy context, suggesting faces were being integrated with contextual threat information. The P3 component exhibited enhanced brain activity in response to faces preceded by happy and fearful eyes compared with neutral eyes, indicating motivated attention processing may be involved at this stage. Altogether, these results indicate for the first time that the influence of isolated eye regions on the perception of surprised faces involves preferential processing at the early stages and elaborate processing at the late stages. Moreover, higher cognitive processes such as predictions and attention can modulate face processing from the earliest stages in a top-down manner. © 2017 Society for Psychophysiological Research.

The effect of interruptions and breaks on insight and impasses: Do you need a break right now?

NARCIS (Netherlands)

Beeftink, F.; van Eerde, W.; Rutte, C.G.

2008-01-01

Some time away from a problem, or incubation time, is found to be beneficial to creative problem solving. But are interruptions as equally helpful as breaks? An experiment was conducted to gain more insight into the differences between imposed and self-initiated breaks, and their effects on

On the surprising rigidity of the Pauli exclusion principle

International Nuclear Information System (INIS)

Greenberg, O.W.

1989-01-01

I review recent attempts to construct a local quantum field theory of small violations of the Pauli exclusion principle and suggest a qualitative reason for the surprising rigidity of the Pauli principle. I suggest that small violations can occur in our four-dimensional world as a consequence of the compactification of a higher-dimensional theory in which the exclusion principle is exactly valid. I briefly mention a recent experiment which places a severe limit on possible violations of the exclusion principle. (orig.)

Line-breaking algorithm enhancement in inverse typesetting paradigma

Directory of Open Access Journals (Sweden)

Jan Přichystal

2007-01-01

Full Text Available High quality text preparing using computer desktop publishing systems usually uses line-breaking algorithm which cannot make provision for line heights and typeset paragraph accurately when composition width, page break, line index or other object appears. This article deals with enhancing of line-breaking algorithm based on optimum-fit algorithm. This algorithm is enhanced with calculation of immediate typesetting width and thus solves problem of forced change. Line-breaking algorithm enhancement causes expansion potentialities of high-quality typesetting in cases that have not been yet covered with present typesetting systems.

Supersymmetry Breaking through Transparent Extra Dimensions

Energy Technology Data Exchange (ETDEWEB)

Schmaltz, Martin

1999-11-23

We propose a new framework for mediating supersymmetry breaking through an extra dimension. It predicts positive scalar masses and solves the supersymmetric flavor problem. Supersymmetry breaks on a ''source'' brane that is spatially separated from a parallel brane on which the standard model matter fields and their superpartners live. The gauge and gaugino fields propagate in the bulk, the latter receiving a supersymmetry breaking mass from direct couplings to the source brane. Scalar masses are suppressed at the high scale but are generated via the renormalization group. We briefly discuss the spectrum and collider signals for a range of compactification scales.

Human Cell Assays for Synthesis-Dependent Strand Annealing and Crossing over During Double-Strand Break Repair.

Science.gov (United States)

Zapotoczny, Grzegorz; Sekelsky, Jeff

2017-04-03

DNA double-strand breaks (DSBs) are one of the most deleterious types of lesions to the genome. Synthesis-dependent strand annealing (SDSA) is thought to be a major pathway of DSB repair, but direct tests of this model have only been conducted in budding yeast and Drosophila To better understand this pathway, we developed an SDSA assay for use in human cells. Our results support the hypothesis that SDSA is an important DSB repair mechanism in human cells. We used siRNA knockdown to assess the roles of a number of helicases suggested to promote SDSA. None of the helicase knockdowns reduced SDSA, but knocking down BLM or RTEL1 increased SDSA. Molecular analysis of repair products suggests that these helicases may prevent long-tract repair synthesis. Since the major alternative to SDSA (repair involving a double-Holliday junction intermediate) can lead to crossovers, we also developed a fluorescent assay that detects crossovers generated during DSB repair. Together, these assays will be useful in investigating features and mechanisms of SDSA and crossover pathways in human cells. Copyright © 2017 Zapotoczny and Sekelsky.

Human Cell Assays for Synthesis-Dependent Strand Annealing and Crossing over During Double-Strand Break Repair

Directory of Open Access Journals (Sweden)

Grzegorz Zapotoczny

2017-04-01

Full Text Available DNA double-strand breaks (DSBs are one of the most deleterious types of lesions to the genome. Synthesis-dependent strand annealing (SDSA is thought to be a major pathway of DSB repair, but direct tests of this model have only been conducted in budding yeast and Drosophila. To better understand this pathway, we developed an SDSA assay for use in human cells. Our results support the hypothesis that SDSA is an important DSB repair mechanism in human cells. We used siRNA knockdown to assess the roles of a number of helicases suggested to promote SDSA. None of the helicase knockdowns reduced SDSA, but knocking down BLM or RTEL1 increased SDSA. Molecular analysis of repair products suggests that these helicases may prevent long-tract repair synthesis. Since the major alternative to SDSA (repair involving a double-Holliday junction intermediate can lead to crossovers, we also developed a fluorescent assay that detects crossovers generated during DSB repair. Together, these assays will be useful in investigating features and mechanisms of SDSA and crossover pathways in human cells.

Efficiency and CO[sub 2] emission analysis of pathways by which methane can provide transportation services

Energy Technology Data Exchange (ETDEWEB)

Crane, P; Scott, D S [Victoria Univ., BC (Canada). Inst. for Integrated Energy Systems Victoria Univ., BC (Canada). Dept. of Mechanical Engineering

1992-07-01

Methane is expected to have an increasingly important role as an energy source in the future. As a result, methane will become a major energy source for the transportation sector. Future energy systems will also be selected for efficiency and environmental gentility. Six candidate pathways by which the energy for service transportation can be provided, using methane as the sole energy source, are proposed and are compared with the use of gasoline from petroleum. These pathways involve methanol, methane and hydrogen used in spark ignition engines and solid polymer fuel cells. The energy conversion processes in each pathway are analysed based on the second law of thermodynamics. Two performance criteria are used: total exergy input to the pathway and total carbon dioxide produced along the pathway. All results are normalized to a unit of transportation service, in this case 1 km of city driving. A surprising result is that the methanol spark ignition engine pathway is the least efficient and produces the greatest amount of carbon dioxide, of the pathways examined. Hydrogen and fuel cell pathways are found to be optimal using the criteria of this paper. (author)

Systematic analysis of DNA damage induction and DNA repair pathway activation by continuous wave visible light laser micro-irradiation

Directory of Open Access Journals (Sweden)

Britta Muster

2017-02-01

Full Text Available Laser micro-irradiation can be used to induce DNA damage with high spatial and temporal resolution, representing a powerful tool to analyze DNA repair in vivo in the context of chromatin. However, most lasers induce a mixture of DNA damage leading to the activation of multiple DNA repair pathways and making it impossible to study individual repair processes. Hence, we aimed to establish and validate micro-irradiation conditions together with inhibition of several key proteins to discriminate different types of DNA damage and repair pathways using lasers commonly available in confocal microscopes. Using time-lapse analysis of cells expressing fluorescently tagged repair proteins and also validation of the DNA damage generated by micro-irradiation using several key damage markers, we show that irradiation with a 405 nm continuous wave laser lead to the activation of all repair pathways even in the absence of exogenous sensitization. In contrast, we found that irradiation with 488 nm laser lead to the selective activation of non-processive short-patch base excision and single strand break repair, which were further validated by PARP inhibition and metoxyamine treatment. We conclude that these low energy conditions discriminated against processive long-patch base excision repair, nucleotide excision repair as well as double strand break repair pathways.

Electroweak symmetry breaking in supersymmetric gauge-Higgs unification models

International Nuclear Information System (INIS)

Choi, Kiwoon; Jeong, Kwang-Sik; Okumura, Ken-ichi; Haba, Naoyuki; Shimizu, Yasuhiro; Yamaguchi, Masahiro

2004-01-01

We examine the Higgs mass parameters and electroweak symmetry breaking in supersymmetric orbifold field theories in which the 4-dimensional Higgs fields originate from higher-dimensional gauge supermultiplets. It is noted that such gauge-Higgs unification leads to a specific boundary condition on the Higgs mass parameters at the compactification scale, which is independent of the details of supersymmetry breaking mechanism. With this boundary condition, phenomenologically viable parameter space of the model is severely constrained by the condition of electroweak symmetry breaking for supersymmetry breaking scenarios which can be realized naturally in orbifold field theories. For instance, if it is assumed that the 4-dimensional effective theory is the minimal supersymmetric standard model with supersymmetry breaking parameters induced by the Scherk-Schwarz mechanism, a correct electroweak symmetry breaking can not be achieved for reasonable range of parameters of the model, even when one includes additional contributions to the Higgs mass parameters from the auxiliary component of 4-dimensional conformal compensator. However if there exists a supersymmetry breaking mediated by brane superfields, sizable portion of the parameter space can give a correct electroweak symmetry breaking. (author)

A new in vivo model of pantothenate kinase-associated neurodegeneration reveals a surprising role for transcriptional regulation in pathogenesis.

Directory of Open Access Journals (Sweden)

Varun ePandey

2013-09-01

Full Text Available Pantothenate Kinase-Associated Neurodegeneration (PKAN is a neurodegenerative disorder with a poorly understood molecular mechanism. It is caused by mutations in Pantothenate Kinase, the first enzyme in the Coenzyme A (CoA biosynthetic pathway. Here, we developed a Drosophila model of PKAN (tim-fbl flies that allows us to continuously monitor the modeled disease in the brain. In tim-fbl flies, downregulation of fumble, the Drosophila PanK homologue in the cells containing a circadian clock results in characteristic features of PKAN such as developmental lethality, hypersensitivity to oxidative stress, and diminished life span. Despite quasi-normal circadian transcriptional rhythms, tim-fbl flies display brain-specific aberrant circadian locomotor rhythms, and a unique transcriptional signature. Comparison with expression data from flies exposed to paraquat demonstrates that, as previously suggested, pathways others than oxidative stress are affected by PANK downregulation. Surprisingly we found a significant decrease in the expression of key components of the photoreceptor recycling pathways, which could lead to retinal degeneration, a hallmark of PKAN. Importantly, these defects are not accompanied by changes in structural components in eye genes suggesting that changes in gene expression in the eye precede and may cause the retinal degeneration. Indeed tim-fbl flies have diminished response to light transitions, and their altered day/night patterns of activity demonstrates defects in light perception. This suggest that retinal lesions are not solely due to oxidative stress and demonstrates a role for the transcriptional response to CoA deficiency underlying the defects observed in dPanK deficient flies. Moreover, in the present study we developed a new fly model that can be applied to other diseases and that allows the assessment of neurodegeneration in the brains of living flies.

The genome of Pelobacter carbinolicus reveals surprising metabolic capabilities and physiological features

Energy Technology Data Exchange (ETDEWEB)

Aklujkar, Muktak [University of Massachusetts, Amherst; Haveman, Shelley [University of Massachusetts, Amherst; DiDonatoJr, Raymond [University of Massachusetts, Amherst; Chertkov, Olga [Los Alamos National Laboratory (LANL); Han, Cliff [Los Alamos National Laboratory (LANL); Land, Miriam L [ORNL; Brown, Peter [University of Massachusetts, Amherst; Lovley, Derek [University of Massachusetts, Amherst

2012-01-01

Background: The bacterium Pelobacter carbinolicus is able to grow by fermentation, syntrophic hydrogen/formate transfer, or electron transfer to sulfur from short-chain alcohols, hydrogen or formate; it does not oxidize acetate and is not known to ferment any sugars or grow autotrophically. The genome of P. carbinolicus was sequenced in order to understand its metabolic capabilities and physiological features in comparison with its relatives, acetate-oxidizing Geobacter species. Results: Pathways were predicted for catabolism of known substrates: 2,3-butanediol, acetoin, glycerol, 1,2-ethanediol, ethanolamine, choline and ethanol. Multiple isozymes of 2,3-butanediol dehydrogenase, ATP synthase and [FeFe]-hydrogenase were differentiated and assigned roles according to their structural properties and genomic contexts. The absence of asparagine synthetase and the presence of a mutant tRNA for asparagine encoded among RNA-active enzymes suggest that P. carbinolicus may make asparaginyl-tRNA in a novel way. Catabolic glutamate dehydrogenases were discovered, implying that the tricarboxylic acid (TCA) cycle can function catabolically. A phosphotransferase system for uptake of sugars was discovered, along with enzymes that function in 2,3-butanediol production. Pyruvate: ferredoxin/flavodoxin oxidoreductase was identified as a potential bottleneck in both the supply of oxaloacetate for oxidation of acetate by the TCA cycle and the connection of glycolysis to production of ethanol. The P. carbinolicus genome was found to encode autotransporters and various appendages, including three proteins with similarity to the geopilin of electroconductive nanowires. Conclusions: Several surprising metabolic capabilities and physiological features were predicted from the genome of P. carbinolicus, suggesting that it is more versatile than anticipated.

Coincidence cross sections within the quasi free break-up model for elastic projectile break-up

International Nuclear Information System (INIS)

Corcalciuc, V.; Jelitto, H.

1991-11-01

Scrutinizing the basic break-up model of Serber we show that it is possible to derive the triple differential cross sections for particle-particle coincidences in analytical form. An alternative interpretation within the opaque version of the model suggests to assign these cross sections to the elastic nonresonant projectile break-up due to the nuclear interaction. Distortion effects by the Coulomb field of the target are included in analogy to the Serber model. Beside the well known single maximum in the break-up spectra double and triple peak structures appear for certain combinations of the observation angles. The model yields reasonable agreement to the given experimental data, concerning the multiple peak structure as well as the order of magnitude for the absolute normalisation. Its application comprises the region of forward emission angles, especially the angular range of the classical Coulomb deflection. (orig.) [de

Breaking Bad News: Can We Get It Right?

Directory of Open Access Journals (Sweden)

Kurer MA

2008-01-01

Full Text Available The health service involves a spectrum of personnel working together towards achieving a common goal, namely the delivery of high quality health care. This involves a large volume of communication between members of staff and patients and their relatives. Doctors are trained to deal with various clinical situations but receive little or no training in communication skills and therefore their communication skills are predominantly instinctive. Patients and their relatives are understandably anxious and vulnerable and it is not surprising that things can go wrong if effective communication is not practiced. Although most doctors communicate effectively, there is increasing evidence that a large number of patients remain unhappy with the amount of information given and the manner of its delivery [1]. Maguire and colleagues found that when doctors use communication skills effectively, both they and their patients benefit [2]. Furthermore, ineffective communication is an important source of complaints and litigations. In a recent Japanese study 81% of litigation involved insufficient or incorrect explanations by the physician [3]. Moreover, in 26% of cases poorly delivered information was found to be the reason that prompted individuals to file a malpractice claim [4]. This article looks into a specific area of communication between doctors, on the one hand, and patients and their relatives on the other; namely “breaking bad news”. It highlights the importance of equipping doctors to effectively communicate with patients and their relatives.

Formation of double-strand breaks in DNA of γ-irradiated bacteria depending on the function of fast repair processes of DNA single-strand breaks

International Nuclear Information System (INIS)

Petrov, S.I.; Gaziev, A.I.

1980-01-01

The formation of double-strand breaks in DNA of γ-irradiated ( 60 Co)Ex coli bacteria depending on the function of fast repair processes of DNA single-strand breaks, is investigated. The profiles of sedimentation of DNA Ex coli cells, irradiated at 0-2 deg C in the salt medium and in EDTA-borate buffer, are presented. It is shown that when irradiating cells in EDTA-borate buffer, the output of single- and double strand breaks in DNA is much higher than in the case of their irradiation in the minimum salt medium. The dependence of output of single-strand and double-strand breaks depending on the radiatier doze of E coli cells in the salt medium and EDTA-borate buffer, is studied. The supposition is made on the presence of a regulative interaction between the accumulation of DNA single-breaks and their repair with the formation of double-strand breaks. The functionating of fast and superfast repair processes considerably affects the formation of double-strand breaks in DNA of a bacterium cell. A considerable amount of double-breaks registered immediately after irradiation forms due to a close position of single-strand breaks on the opposite DNA strands

Breaking bread

OpenAIRE

Dunbar, RIM

2017-01-01

Communal eating, whether in feasts or everyday meals with family or friends, is a human universal, yet it has attracted surprisingly little evolutionary attention. I use data from a UK national stratified survey to test the hypothesis that eating with others provides both social and individual benefits. I show that those who eat socially more often feel happier and are more satisfied with life, are more trusting of others, are more engaged with their local communities, and have more friends t...

PWR cold-leg small break loca with faulty HPI

International Nuclear Information System (INIS)

Kumamaru, H.; Kukita, Y.

1991-01-01

The ROSA-IV Large Scale Test Facility (LSTF) is a 1/48 volumetrically-scaled model of a pressurized water reactor (PWR). At the LSTF are performed cold-leg small-break loss-of-coolant accident (LOCA) tests with faulty high pressure injection (HPI) system for break areas from 0.5% to 10% and an intentional primary system depressurization test following a small-break LOCA test. A simple prediction model is proposed for prediction of times of major events. Test data and calculations show that intentional primary system depressurization with use of the pressurizer power-operated relief valves (PORVs) is effective for break areas of approximately 0.5% or less, is unnecessary for breaks of 5% or more, and is insufficient for intermediate break areas to maintain adequate core cooling. (author)

Mycobacterial UvrD1 is a Ku-dependent DNA helicase that plays a role in multiple DNA repair events, including double-strand break repair.

Science.gov (United States)

Sinha, Krishna Murari; Stephanou, Nicolas C; Gao, Feng; Glickman, Michael S; Shuman, Stewart

2007-05-18

Mycobacterium tuberculosis and other bacterial pathogens have a Ku-dependent nonhomologous end joining pathway of DNA double-strand break repair. Here we identify mycobacterial UvrD1 as a novel interaction partner for Ku in a genome-wide yeast two-hybrid screen. UvrD1 per se is a vigorous DNA-dependent ATPase but a feeble DNA helicase. Ku stimulates UvrD1 to catalyze ATP-dependent unwinding of 3'-tailed DNAs. UvrD1, Ku, and DNA form a stable ternary complex in the absence of ATP. The Ku binding determinants are located in the distinctive C-terminal segment of UvrD1. A second mycobacterial paralog, UvrD2, is a vigorous Ku-independent DNA helicase. Ablation of UvrD1 sensitizes Mycobacterium smegmatis to killing by ultraviolet and ionizing radiation and to a single chromosomal break generated by I-SceI endonuclease. The physical and functional interactions of bacterial Ku and UvrD1 highlight the potential for cross-talk between components of nonhomologous end joining and nucleotide excision repair pathways.

Dirac neutrino masses from generalized supersymmetry breaking

International Nuclear Information System (INIS)

Demir, D.A.; Everett, L.L.; Langacker, P.

2007-12-01

We demonstrate that Dirac neutrino masses in the experimentally preferred range are generated within supersymmetric gauge extensions of the Standard Model with a generalized supersymmetry breaking sector. If the usual superpotential Yukawa couplings are forbidden by the additional gauge symmetry (such as a U(1) ' ), effective Dirac mass terms involving the ''wrong Higgs'' field can arise either at tree level due to hard supersymmetry breaking fermion Yukawa couplings, or at one-loop due to nonanalytic or ''nonholomorphic'' soft supersymmetry breaking trilinear scalar couplings. As both of these operators are naturally suppressed in generic models of supersymmetry breaking, the resulting neutrino masses are naturally in the sub-eV range. The neutrino magnetic and electric dipole moments resulting from the radiative mechanism also vanish at one-loop order. (orig.)

The Coulomb break-up of 9Be

International Nuclear Information System (INIS)

Macdonald, E.W.; Shotter, A.C.; Branford, D.; Rahighi, J.; Davinson, T.; Davis, N.J.

1992-01-01

Kinematically complete data is presented on the break-up reaction 120 Sn( 9 Be, 8 Be g.s +n) 120 Sn g.s. at E beam =90 MeV for several scattering angles inside the grazing angle. These data are compared with the predictions of a Coulomb break-up model. It is shown that the data can be understood in terms of the Coulomb model provided some account is taken of the interactions of the break-up fragments with the target. Analysis of the 9 Be break-up data, using radio-isotope measurements of the 9 Be(γ, n) cross-section, indicates that for this photo-disintegration reaction there is probably a significant direct component to the threshold cross-section, in addition to a threshold resonance at 1.69 MeV. (orig.)

Musculoskeletal injuries in break-dancers.

Science.gov (United States)

Cho, Chul Hyun; Song, Kwang Soon; Min, Byung Woo; Lee, Sung Moon; Chang, Hyuk Won; Eum, Dae Seup

2009-11-01

Since no epidemiologic studies have been reported about musculoskeletal injuries in break-dancers, there are no data on the rates and patterns of musculoskeletal injuries in this population that clinicians can use to find ways to decrease injury rate. We believe that the incidence of injuries in break-dancers is higher than assumed and that injury rates and patterns differ between professional and amateur dancers. Descriptive epidemiologic study. Of a total of 42 study subjects, 23 were professional dancers and 19 were amateur dancers. Injury frequency, site and type, along with the presence of supervised training, the use of protective devices and warm-up exercises done were recorded. Of the 42 study subjects, excluding two amateur dancers, 40 (95.2%) had had musculoskeletal injuries at more than one site. The mean number of sites per dancer was 4.60. The frequency of injury depended on the site and was as follows: wrist (69.0%), finger (61.9%), knee (61.9%), shoulder (52.4%), lumbar spine (50.0%), elbow (42.9%), cervical spine (38.1%), ankle (38.1%), foot (28.6%) and hip (16.7%). Sprain, strain and tendinitis were the most common injuries, accounting for the most cases. Of the 42 dancers, 13 (31%) had had fractures or dislocations. Eight (19.1%) learned break-dancing under supervised instruction, 17 (40.5%) used protective devices and 28 (66.7%) performed warm-up exercises before dancing. There were significant differences in age, dance career length, amount of dance training, mean number of injury sites and the presence of supervised training between professionals and amateurs (Pnature of the activities that result in both unusual and common injuries in break-dancers and educate them about safety. Careful screening, instruction and supervised training of break-dancers will help to prevent injuries.

SUSY breaking mediation by throat fields

International Nuclear Information System (INIS)

Bruemmer, F.; Hebecker, A.; Trapletti, M.

2006-01-01

We investigate, in the general framework of KKLT, the mediation of supersymmetry breaking by fields propagating in the strongly warped region of the compactification manifold ('throat fields'). Such fields can couple both to the supersymmetry breaking sector at the IR end of the throat and to the visible sector at the UV end. We model the supersymmetry breaking sector by a chiral superfield which develops an F term vacuum expectation value (also responsible for the uplift). It turns out that the mediation effect of vector multiplets propagating in the throat can compete with modulus-anomaly mediation. Moreover, such vector fields are naturally present as the gauge fields arising from isometries of the throat (most notably the SO(4) isometry of the Klebanov-Strassler solution). Their mediation effect is important in spite of their large 4d mass. The latter is due to the breaking of the throat isometry by the compact manifold at the UV end of the throat. The contribution from heavy chiral superfields is found to be subdominant

ANALISA BREAK EVENT POINT (BEP TERHADAP LABA PERUSAHAAN

Directory of Open Access Journals (Sweden)

Muhammad Yusuf

2015-09-01

Full Text Available Break event point or the break-even point can be defined as a situation where the operating company does not make a profit and not a loss. The goal is to provide the knowledge to increase knowledge about the break event point (the point of principal and its relationship with the company profit and to know how the results of the. Analysis break event point is very important for the leadership of the company to determine the production rate how much the cost will be equal to the amount of sales or in other words to determine the break event point we will determine the relationship between sales, production, selling price, cost, loss or profit, making it easier for leaders to take discretion.DOI: 10.15408/ess.v4i1.1955 

Cloud Surprises in Moving NASA EOSDIS Applications into Amazon Web Services

Science.gov (United States)

Mclaughlin, Brett

2017-01-01

NASA ESDIS has been moving a variety of data ingest, distribution, and science data processing applications into a cloud environment over the last 2 years. As expected, there have been a number of challenges in migrating primarily on-premises applications into a cloud-based environment, related to architecture and taking advantage of cloud-based services. What was not expected is a number of issues that were beyond purely technical application re-architectures. We ran into surprising network policy limitations, billing challenges in a government-based cost model, and difficulty in obtaining certificates in an NASA security-compliant manner. On the other hand, this approach has allowed us to move a number of applications from local hosting to the cloud in a matter of hours (yes, hours!!), and our CMR application now services 95% of granule searches and an astonishing 99% of all collection searches in under a second. And most surprising of all, well, you'll just have to wait and see the realization that caught our entire team off guard!

The structure of GUT breaking by orbifolding

International Nuclear Information System (INIS)

Hebecker, Arthur; March-Russell, John

2002-01-01

Recently, an attractive model of GUT breaking has been proposed in which a 5-dimensional supersymmetric SU(5) gauge theory on an S 1 /(Z 2 xZ 2 ') orbifold is broken down to the 4d MSSM by SU(5)-violating boundary conditions. Motivated by this construction and several related realistic models, we investigate the general structure of orbifolds in the effective field theory context, and of this orbifold symmetry breaking mechanism in particular. An analysis of the group theoretic structure of orbifold breaking is performed. This depends upon the existence of appropriate inner and outer automorphisms of the Lie algebra, and we show that a reduction of the rank of the GUT group is possible. Some aspects of larger GUT theories based on SO(10) and E 6 are discussed. We explore the possibilities of defining the theory directly on a space with boundaries and breaking the gauge symmetry by more general consistently chosen boundary conditions for the fields. Furthermore, we derive the relation of orbifold breaking with the familiar mechanism of Wilson line breaking, finding a one-to-one correspondence, both conceptually and technically. Finally, we analyse the consistency of orbifold models in the effective field theory context, emphasizing the necessity for self-adjoint extensions of the Hamiltonian and other conserved operators, and especially the highly restrictive anomaly cancellation conditions that apply if the bulk theory lives in more than 5 dimensions

Microwave-assisted rock breaking modelling and application

CSIR Research Space (South Africa)

Monchusi, B

2012-10-01

Full Text Available As part of the ongoing development of novel mining methods, the CSIR has developed alternative methods to break rocks. In this case, we show the application of microwave energy to break narrow tabular ore bodies....

Higgsless grand unified theory breaking and trinification

International Nuclear Information System (INIS)

Carone, Christopher D.; Conroy, Justin M.

2004-01-01

Boundary conditions on an extra dimensional interval can be chosen to break bulk gauge symmetries and to reduce the rank of the gauge group. We consider this mechanism in models with gauge trinification. We determine the boundary conditions necessary to break the trinified gauge group directly down to that of the standard model. Working in an effective theory for the gauge-symmetry-breaking parameters on a boundary, we examine the limit in which the grand-unified theory-breaking-sector is Higgsless and show how one may obtain the low-energy particle content of the minimal supersymmetric standard model. We find that gauge unification is preserved in this scenario, and that the differential gauge coupling running is logarithmic above the scale of compactification. We compare the phenomenology of our model to that of four dimensional 'trinified' theories

Nearshore bars and the break-point hypothesis

Science.gov (United States)

Sallenger, A.H.; Howd, P.A.

1989-01-01

The set of hypotheses calling for bar formation at the break point was tested with field data. During two different experiments, waves were measured across the surf zone coincident with the development of a nearshore bar. We use a criterion, based on the wave height to depth ratio, to determine the offshore limit of the inner surf zone. During the first experiment, the bar became better developed and migrated offshore while remaining well within the inner surf zone. During the second experiment, the surf zone was narrower and we cannot rule out the possibility of break point processes contributing to bar development. We conclude that bars are not necessarily coupled with the break point and can become better developed and migrate offshore while being in the inner surf zone landward from initial wave breaking in the outer surf zone. ?? 1989.

Best estimate small break LOCA analysis for KNGR SIS optimization

International Nuclear Information System (INIS)

Song, JIn Ho; Lim, Hong Sik; Bae, Kyoo Hwan; Lee, Joon

1996-01-01

The KNGR has an advanced ECCS design feature which employs four mechanically-separated SI trains where each train consisting of one HPSI pump and one SIT injects ECC water directly into the reactor vessel downcomer annulus. To demonstrate that the KNGR ECCS design features meet the EPRI ALWR requirements of no core uncovery for a break of up to 6 inch diameter, small break LOCA cases with various break sizes were analyzed using a best-estimate analytical procedure. Two kinds of break locations are considered: cold leg and DVI line breaks. It was observed that the KNGR ECCS design can tolerate a cold leg break of up to 10 inches with no core uncovery. However, since DVI line break with 6 inch diameter undergoes slight core uncovery, further investigation is required for KNGR SIS optimization

Risk, surprises and black swans fundamental ideas and concepts in risk assessment and risk management

CERN Document Server

Aven, Terje

2014-01-01

Risk, Surprises and Black Swans provides an in depth analysis of the risk concept with a focus on the critical link to knowledge; and the lack of knowledge, that risk and probability judgements are based on.Based on technical scientific research, this book presents a new perspective to help you understand how to assess and manage surprising, extreme events, known as 'Black Swans'. This approach looks beyond the traditional probability-based principles to offer a broader insight into the important aspects of uncertain events and in doing so explores the ways to manage them.

Proteome analysis of Norway maple (Acer platanoides L.) seeds dormancy breaking and germination: influence of abscisic and gibberellic acids.

Science.gov (United States)

Pawłowski, Tomasz A

2009-05-04

Seed dormancy is controlled by the physiological or structural properties of a seed and the external conditions. It is induced as part of the genetic program of seed development and maturation. Seeds with deep physiological embryo dormancy can be stimulated to germinate by a variety of treatments including cold stratification. Hormonal imbalance between germination inhibitors (e.g. abscisic acid) and growth promoters (e.g. gibberellins) is the main cause of seed dormancy breaking. Differences in the status of hormones would affect expression of genes required for germination. Proteomics offers the opportunity to examine simultaneous changes and to classify temporal patterns of protein accumulation occurring during seed dormancy breaking and germination. Analysis of the functions of the identified proteins and the related metabolic pathways, in conjunction with the plant hormones implicated in seed dormancy breaking, would expand our knowledge about this process. A proteomic approach was used to analyse the mechanism of dormancy breaking in Norway maple seeds caused by cold stratification, and the participation of the abscisic (ABA) and gibberellic (GA) acids. Forty-four proteins showing significant changes were identified by mass spectrometry. Of these, eight spots were identified as water-responsive, 18 spots were ABA- and nine GA-responsive and nine spots were regulated by both hormones. The classification of proteins showed that most of the proteins associated with dormancy breaking in water were involved in protein destination. Most of the ABA- and GA-responsive proteins were involved in protein destination and energy metabolism. In this study, ABA was found to mostly down-regulate proteins whereas GA up-regulated proteins abundance. Most of the changes were observed at the end of stratification in the germinated seeds. This is the most active period of dormancy breaking when seeds pass from the quiescent state to germination. Seed dormancy breaking involves

Proteome analysis of Norway maple (Acer platanoides L. seeds dormancy breaking and germination: influence of abscisic and gibberellic acids

Directory of Open Access Journals (Sweden)

Pawłowski Tomasz A

2009-05-01

Full Text Available Abstract Background Seed dormancy is controlled by the physiological or structural properties of a seed and the external conditions. It is induced as part of the genetic program of seed development and maturation. Seeds with deep physiological embryo dormancy can be stimulated to germinate by a variety of treatments including cold stratification. Hormonal imbalance between germination inhibitors (e.g. abscisic acid and growth promoters (e.g. gibberellins is the main cause of seed dormancy breaking. Differences in the status of hormones would affect expression of genes required for germination. Proteomics offers the opportunity to examine simultaneous changes and to classify temporal patterns of protein accumulation occurring during seed dormancy breaking and germination. Analysis of the functions of the identified proteins and the related metabolic pathways, in conjunction with the plant hormones implicated in seed dormancy breaking, would expand our knowledge about this process. Results A proteomic approach was used to analyse the mechanism of dormancy breaking in Norway maple seeds caused by cold stratification, and the participation of the abscisic (ABA and gibberellic (GA acids. Forty-four proteins showing significant changes were identified by mass spectrometry. Of these, eight spots were identified as water-responsive, 18 spots were ABA- and nine GA-responsive and nine spots were regulated by both hormones. The classification of proteins showed that most of the proteins associated with dormancy breaking in water were involved in protein destination. Most of the ABA- and GA-responsive proteins were involved in protein destination and energy metabolism. Conclusion In this study, ABA was found to mostly down-regulate proteins whereas GA up-regulated proteins abundance. Most of the changes were observed at the end of stratification in the germinated seeds. This is the most active period of dormancy breaking when seeds pass from the quiescent

Optical probes of symmetry breaking in magnetic and superconducting BaFe2(As1-xPx)2

Science.gov (United States)

Orenstein, Joseph

The discovery of iron pnictide superconductors has opened promising new directions in the effort to fully understand the phenomenon of high-Tc, with a focus on the connections between superconductivity, magnetism, and electronic nematicity. The BaFe2(As1-xPx)2 (P:Ba122) system in particular has received attention because isovalent substitution of As for P generates less disorder than doping on the Fe site. The phase diagram of P:Ba122 is characterized by a line of simultaneous antiferromagnetic (AF) and tetragonal-to-orthorhombic transitions, Ts (x) , that penetrates the superconducting dome at x =0.28, just below optimal doping (xopt = 0.30). In this work, we use spatially-resolved optical polarimetry and photomodulated reflectance to detect linear birefringence and therefore breaking of 4-fold rotational (C4) symmetry. In underdoped (xTsand grows continuously with decreasing T . The birefringence is unidirectional in a large (300 μm x300 μm) field of view, suggesting that C4 breaking in this range of T is caused by residual strain that couples to a diverging nematic susceptibility. Birefringence maps just below Ts (x) show the appearance of domains, indicating the onset of spontaneous symmetry breaking to an AF ground state. Surprisingly, in samples with x>0.28, in which the low T phase is superconducting/ tetragonal rather than AF/orthorhombic, C4 breaking is observed as well, with an abrupt onset and domain formation at 55 K. We tentatively associate these features with a transition to an AF phase induced by residual strain, as previously proposed [H.-H. Kuo et al. Phys. Rev. B86, 134507 (2012)] to account for structure in resistivity vs. T. Time-resolved photomodulation allow us to follow the amplitude of the AF order with time following pulsed photoexcitation. Below Tc the AF order at first weakens , but then strengthens in response to the photoinduced weakening of superconductivity. This complex time evolution is accounted for quantitatively by a model

BWR recirculation loop discharge line break LOCA tests with break areas of 50 and 100% assuming HPCS failure at ROSA-III test facility

International Nuclear Information System (INIS)

Suzuki, Mitsuhiro; Tasaka, Kanji; Yonomoto, Taisuke; Anoda, Yoshinari; Kumamaru, Hiroshige; Nakamura, Hideo; Murata, Hideo; Shiba, Masayoshi; Iriko, Masanori.

1985-03-01

This report presents the experimental results of RUN 962 and RUN 963 in ROSA-III program, which are 50 and 100 % break LOCA tests at the BWR recirculation pump discharge line, respectively. The ROSA-III test facility simulates a volumetrically scaled (1/424) BWR system and has four half-length electrically heated fuel bundles, two active recirculation loops, three types of ECCSs and steam and feedwater systems. The experimental data of RUN 962 and RUN 963 were compared with those of RUN 961, a 200 % discharge line break test to study the break area effects on the transient thermal hydraulic phenomena. The least flow areas at the jet pump drive nozzles and recirculation pump discharge nozzle in the broken recirculation loop limitted the discharge flows from the pressure vessel and the depressurization rate in the 100 and 200 % break tests, whereas the least flow area at break nozzle limitted the depressurization rate in the 50 % break test. The highest PCT was observed in the 50 % break test among the three tests. (author)

Dynamical Symmetry Breaking of Extended Gauge Symmetries

OpenAIRE

Appelquist, Thomas; Shrock, Robert

2003-01-01

We construct asymptotically free gauge theories exhibiting dynamical breaking of the left-right, strong-electroweak gauge group $G_{LR} = {\\rm SU}(3)_c \\times {\\rm SU}(2)_L \\times {\\rm SU}(2)_R \\times {\\rm U}(1)_{B-L}$, and its extension to the Pati-Salam gauge group $G_{422}={\\rm SU}(4)_{PS} \\times {\\rm SU}(2)_L \\times {\\rm SU}(2)_R$. The models incorporate technicolor for electroweak breaking, and extended technicolor for the breaking of $G_{LR}$ and $G_{422}$ and the generation of fermion ...

Nonrandom distribuion of chromosome breaks in cultured lymphocytes of normal subjects

Energy Technology Data Exchange (ETDEWEB)

Ayme, S.; Mattei, J.F.; Mattei, M.G.; Aurran, Y.; Giraud, F.

1976-02-29

Breakpoint distribution was studied from cultured lymphocytes on 7653 metaphases from 524 subjects whose karyotypes were normal. The mean break rate was 5% in both sexes. The frequency increased significantly after 40 years and varied during the year. The location of the breaks was very different from the expected random distribution. The break frequency for each chromosome was different according to the type of break (chromatid, simple chromosomal and chromosomal involving rearrangements). The location of the breaks was also studied according to the type of band and with respect to the centromere. A comparison between spontaneous breaks, x-ray induced breaks, breaks in Fanconi's anemia and in congenital rearrangements, show very significant differences.

The 2010 Nobel Prize in physics—ground-breaking experiments on graphene

International Nuclear Information System (INIS)

Hancock, Y

2011-01-01

The 2010 Nobel Prize in physics was awarded to Professors Andre Geim and Konstantin Novoselov for their ground-breaking experiments on graphene, a single atomic layer of carbon, and more generally, for their pioneering work in uncovering a new class of materials, namely two-dimensional atomic crystals. This paper gives an accessible account and review of the story of graphene; from its first description in the literature, to the realization and confirmation of its remarkable properties, through to its impressive potential for broad-reaching applications. The story of graphene is written within the context of the enormous impact that Geim and Novoselovs' work has had on this field of research, and recounts their personal pathways of discovery, which ultimately led to their award of the 2010 Nobel Prize. (topical review)

Symmetry Breaking in MILP Formulations for Unit Commitment Problems

KAUST Repository

Lima, Ricardo

2015-12-11

This paper addresses the study of symmetry in Unit Commitment (UC) problems solved by Mixed Integer Linear Programming (MILP) formulations, and using Linear Programming based Branch & Bound MILP solvers. We propose three sets of symmetry breaking constraints for UC MILP formulations exhibiting symmetry, and its impact on three UC MILP models are studied. The case studies involve the solution of 24 instances by three widely used models in the literature, with and without symmetry breaking constraints. The results show that problems that could not be solved to optimality within hours can be solved with a relatively small computational burden if the symmetry breaking constraints are assumed. The proposed symmetry breaking constraints are also compared with the symmetry breaking methods included in two MILP solvers, and the symmetry breaking constraints derived in this work have a distinct advantage over the methods in the MILP solvers.

Symmetry Breaking in MILP Formulations for Unit Commitment Problems

KAUST Repository

Lima, Ricardo; Novais, Augusto Q.

2015-01-01

This paper addresses the study of symmetry in Unit Commitment (UC) problems solved by Mixed Integer Linear Programming (MILP) formulations, and using Linear Programming based Branch & Bound MILP solvers. We propose three sets of symmetry breaking constraints for UC MILP formulations exhibiting symmetry, and its impact on three UC MILP models are studied. The case studies involve the solution of 24 instances by three widely used models in the literature, with and without symmetry breaking constraints. The results show that problems that could not be solved to optimality within hours can be solved with a relatively small computational burden if the symmetry breaking constraints are assumed. The proposed symmetry breaking constraints are also compared with the symmetry breaking methods included in two MILP solvers, and the symmetry breaking constraints derived in this work have a distinct advantage over the methods in the MILP solvers.

Use of multiple dispersal pathways facilitates amphibian persistence in stream networks

Science.gov (United States)

Campbell, Grant E.H.; Nichols, J.D.; Lowe, W.H.; Fagan, W.F.

2010-01-01

Although populations of amphibians are declining worldwide, there is no evidence that salamanders occupying small streams are experiencing enigmatic declines, and populations of these species seem stable. Theory predicts that dispersal through multiple pathways can stabilize populations, preventing extinction in habitat networks. However, empirical data to support this prediction are absent for most species, especially those at risk of decline. Our mark-recapture study of stream salamanders reveals both a strong upstream bias in dispersal and a surprisingly high rate of overland dispersal to adjacent headwater streams. This evidence of route-dependent variation in dispersal rates suggests a spatial mechanism for population stability in headwater-stream salamanders. Our results link the movement behavior of stream salamanders to network topology, and they underscore the importance of identifying and protecting critical dispersal pathways when addressing region-wide population declines.

Use of multiple dispersal pathways facilitates amphibian persistence in stream networks.

Science.gov (United States)

Campbell Grant, Evan H; Nichols, James D; Lowe, Winsor H; Fagan, William F

2010-04-13

Although populations of amphibians are declining worldwide, there is no evidence that salamanders occupying small streams are experiencing enigmatic declines, and populations of these species seem stable. Theory predicts that dispersal through multiple pathways can stabilize populations, preventing extinction in habitat networks. However, empirical data to support this prediction are absent for most species, especially those at risk of decline. Our mark-recapture study of stream salamanders reveals both a strong upstream bias in dispersal and a surprisingly high rate of overland dispersal to adjacent headwater streams. This evidence of route-dependent variation in dispersal rates suggests a spatial mechanism for population stability in headwater-stream salamanders. Our results link the movement behavior of stream salamanders to network topology, and they underscore the importance of identifying and protecting critical dispersal pathways when addressing region-wide population declines.

Multiscale Simulation of Breaking Wave Impacts

DEFF Research Database (Denmark)

Lindberg, Ole

compare reasonably well. The incompressible and inviscid ALE-WLS model is coupled with the potential flow model of Engsig-Karup et al. [2009], to perform multiscale calculation of breaking wave impacts on a vertical breakwater. The potential flow model provides accurate calculation of the wave...... with a potential flow model to provide multiscale calculation of forces from breaking wave impacts on structures....

Developmentally programmed DNA deletion in Tetrahymena thermophila by a transposition-like reaction pathway.

Science.gov (United States)

Saveliev, S V; Cox, M M

1996-01-01

We provide a molecular description of key intermediates in the deletion of two internal eliminated sequences (IES elements), the M and R regions, during macronuclear development in Tetrahymena thermophila. Using a variety of PCR-based methods in vivo, double-strand breaks are detected that are generated by hydrolytic cleavage and correspond closely to the observed chromosomal junctions left behind in the macronuclei. The breaks exhibit a temporal and structural relationship to the deletion reaction that provides strong evidence that they are intermediates in the deletion pathway. Breaks in the individual strands are staggered by 4 bp, producing a four nucleotide 5' extension. Evidence is presented that breaks do not occur simultaneously at both ends. The results are most consistent with a deletion mechanism featuring initiation by double-strand cleavage at one end of the deleted element, followed by transesterification to generate the macronuclear junction on one DNA strand. An adenosine residue is found at all the nucleophilic 3' ends used in the postulated transesterification step. Evidence for the transesterification step is provided by detection of a 3' hydroxyl that would be liberated by such a step at a deletion boundary where no other DNA strand ends are detected. Images PMID:8654384

A synopsis of experimental activities on small-break LOCA

International Nuclear Information System (INIS)

Hein, D.

1984-01-01

Through reactor safety studies like WASH 1400 or the ''Deutsche Risiko-Studie'' the attention has turned from large break loss of coolant accidents to small breaks because of the high contribution of this type of accidents to core meltdown. But only after the TMI-2 accident were also the main activities in the experimental fields shifted world-wide to the small break LOCAs. Since TMI numerous research programs have either been finished or are underway. This review paper presents: a classification of the various types of transients according to break size; a discussion of major physical phenomena associated with a small break LOCA, and a description of a few selected research programs and the most important results achieved. (author)

BOOK REVIEW: Symmetry Breaking

Science.gov (United States)

Ryder, L. H.

2005-11-01

One of the most fruitful and enduring advances in theoretical physics during the last half century has been the development of the role played by symmetries. One needs only to consider SU(3) and the classification of elementary particles, the Yang Mills enlargement of Maxwell's electrodynamics to the symmetry group SU(2), and indeed the tremendous activity surrounding the discovery of parity violation in the weak interactions in the late 1950s. This last example is one of a broken symmetry, though the symmetry in question is a discrete one. It was clear to Gell-Mann, who first clarified the role of SU(3) in particle physics, that this symmetry was not exact. If it had been, it would have been much easier to discover; for example, the proton, neutron, Σ, Λ and Ξ particles would all have had the same mass. For many years the SU(3) symmetry breaking was assigned a mathematical form, but the importance of this formulation fell away when the quark model began to be taken seriously; the reason the SU(3) symmetry was not exact was simply that the (three, in those days) quarks had different masses. At the same time, and in a different context, symmetry breaking of a different type was being investigated. This went by the name of `spontaneous symmetry breaking' and its characteristic was that the ground state of a given system was not invariant under the symmetry transformation, though the interactions (the Hamiltonian, in effect) was. A classic example is ferromagnetism. In a ferromagnet the atomic spins are aligned in one direction only—this is the ground state of the system. It is clearly not invariant under a rotation, for that would change the ground state into a (similar but) different one, with the spins aligned in a different direction; this is the phenomenon of a degenerate vacuum. The contribution of the spin interaction, s1.s2, to the Hamiltonian, however, is actually invariant under rotations. As Coleman remarked, a little man living in a ferromagnet would

Polymorphisms of LIG4, BTBD2, HMGA2, and RTEL1 genes involved in the double-strand break repair pathway predict glioblastoma survival.

Science.gov (United States)

Liu, Yanhong; Shete, Sanjay; Etzel, Carol J; Scheurer, Michael; Alexiou, George; Armstrong, Georgina; Tsavachidis, Spyros; Liang, Fu-Wen; Gilbert, Mark; Aldape, Ken; Armstrong, Terri; Houlston, Richard; Hosking, Fay; Robertson, Lindsay; Xiao, Yuanyuan; Wiencke, John; Wrensch, Margaret; Andersson, Ulrika; Melin, Beatrice S; Bondy, Melissa

2010-05-10

Glioblastoma (GBM) is the most common and aggressive type of glioma and has the poorest survival. However, a small percentage of patients with GBM survive well beyond the established median. Therefore, identifying the genetic variants that influence this small number of unusually long-term survivors may provide important insight into tumor biology and treatment. Among 590 patients with primary GBM, we evaluated associations of survival with the 100 top-ranking glioma susceptibility single nucleotide polymorphisms from our previous genome-wide association study using Cox regression models. We also compared differences in genetic variation between short-term survivors (STS; or= 36 months), and explored classification and regression tree analysis for survival data. We tested results using two independent series totaling 543 GBMs. We identified LIG4 rs7325927 and BTBD2 rs11670188 as predictors of STS in GBM and CCDC26 rs10464870 and rs891835, HMGA2 rs1563834, and RTEL1 rs2297440 as predictors of LTS. Further survival tree analysis revealed that patients >or= 50 years old with LIG4 rs7325927 (V) had the worst survival (median survival time, 1.2 years) and exhibited the highest risk of death (hazard ratio, 17.53; 95% CI, 4.27 to 71.97) compared with younger patients with combined RTEL1 rs2297440 (V) and HMGA2 rs1563834 (V) genotypes (median survival time, 7.8 years). Polymorphisms in the LIG4, BTBD2, HMGA2, and RTEL1 genes, which are involved in the double-strand break repair pathway, are associated with GBM survival.

The scale of supersymmetry breaking as a free parameter

International Nuclear Information System (INIS)

Polonsky, N.

2001-01-01

While supersymmetric extensions of the Standard Model can be fully described in terms of explicitly broken global supersymmetry, this description is only effective. Once related to spontaneous breaking in a more fundamental theory, the effective parameters translate to functions of two distinct scales, the scale of spontaneous supersymmetry breaking and the scale of its mediation to the standard-model fields. The scale dependence will be written explicitly and the full spectrum of supersymmetry breaking operators which emerges will be explored. It will be shown that, contrary to common lore, scale-dependent operators can play an important role in determining the phenomenology. For example, theories with low-energy supersymmetry breaking, such as gauge mediation, may correspond to a scalar potential which is quite different than in theories with high-energy supersymmetry breaking, such as gravity mediation. As a concrete example, the Higgs mass prediction will be discussed in some detail and its upper bound will be shown to be sensitive to the supersymmetry breaking scale

The spontaneous ℤ_2 breaking Twin Higgs

International Nuclear Information System (INIS)

Beauchesne, Hugues; Earl, Kevin; Grégoire, Thomas

2016-01-01

The Twin Higgs model seeks to address the little hierarchy problem by making the Higgs a pseudo-Goldstone of a global SU(4) symmetry that is spontaneously broken to SU(3). Gauge and Yukawa couplings, which explicitly break SU(4), enjoy a discrete ℤ_2 symmetry that accidentally maintains SU(4) at the quadratic level and therefore keeps the Higgs light. Contrary to most beyond the Standard Model theories, the quadratically divergent corrections to the Higgs mass are cancelled by a mirror sector, which is uncharged under the Standard Model groups. However, the Twin Higgs with an exact ℤ_2 symmetry leads to equal vevs in the Standard Model and mirror sectors, which is phenomenologically unviable. An explicit ℤ_2 breaking potential must then be introduced and tuned against the SU(4) breaking terms to produce a hierarchy of vevs between the two sectors. This leads to a moderate but non-negligible tuning. We propose a model to alleviate this tuning, without the need for an explicit ℤ_2 breaking sector. The model consists of two SU(4) fundamental Higgses, one whose vacuum preserves ℤ_2 and one whose vacuum breaks it. As the interactions between the two Higgses are turned on, the ℤ_2 breaking is transmitted from the broken to the unbroken sector and a small hierarchy of vevs is naturally produced. The presence of an effective tadpole and feedback between the two Higgses lead to a sizable improvement of the tuning. The resulting Higgs boson is naturally very Standard Model like.

Breaking the silence

DEFF Research Database (Denmark)

Konradsen, Hanne; Kirkevold, Marit; McCallin, Antoinette

2012-01-01

and individual interviews were analyzed using the grounded theory method. The findings revealed that the main concern of the patients was feeling isolated, which was resolved using a process of interactional integration. Interactional integration begins by breaking the silence to enable the progression from...

Breaking antidunes: Cyclic behavior due to hysteresis

DEFF Research Database (Denmark)

Deigaard, Rolf

2006-01-01

The cyclic behavior of breaking antidunes (growth, breaking of surface wave, obliteration) is investigated by use of a numerical model. The model includes the transition between supercritical and transcritical flow. As the antidune grows the flow becomes transcritical and a hydraulic jump is form...

Group theory of spontaneous symmetry breaking

International Nuclear Information System (INIS)

Ghaboussi, F.

1987-01-01

The connection between the minimality of the Higgs field potential and the maximal little groups of its representation obtained by spontaneous symmetry breaking is analyzed. It is shown that for several representations the lowest minimum of the potential is related to the maximal little group of those representations. Furthermore, a practical necessity criterion is given for the representation of the Higgs field needed for spontaneous symmetry breaking

Detection and Repair of Ionizing Radiation-Induced DNA Double Strand Breaks: New Developments in Nonhomologous End Joining

International Nuclear Information System (INIS)

Wang, Chen; Lees-Miller, Susan P.

2013-01-01

DNA damage can occur as a result of endogenous metabolic reactions and replication stress or from exogenous sources such as radiation therapy and chemotherapy. DNA double strand breaks are the most cytotoxic form of DNA damage, and defects in their repair can result in genome instability, a hallmark of cancer. The major pathway for the repair of ionizing radiation-induced DSBs in human cells is nonhomologous end joining. Here we review recent advances on the mechanism of nonhomologous end joining, as well as new findings on its component proteins and regulation

Detection and Repair of Ionizing Radiation-Induced DNA Double Strand Breaks: New Developments in Nonhomologous End Joining

Energy Technology Data Exchange (ETDEWEB)

Wang, Chen [Departments of Biochemistry and Molecular Biology and Oncology, and Southern Alberta Cancer Research Institute, University of Calgary, Calgary (Canada); Lees-Miller, Susan P., E-mail: leesmill@ucalgary.ca [Departments of Biochemistry and Molecular Biology and Oncology, and Southern Alberta Cancer Research Institute, University of Calgary, Calgary (Canada)

2013-07-01

DNA damage can occur as a result of endogenous metabolic reactions and replication stress or from exogenous sources such as radiation therapy and chemotherapy. DNA double strand breaks are the most cytotoxic form of DNA damage, and defects in their repair can result in genome instability, a hallmark of cancer. The major pathway for the repair of ionizing radiation-induced DSBs in human cells is nonhomologous end joining. Here we review recent advances on the mechanism of nonhomologous end joining, as well as new findings on its component proteins and regulation.

Moduli/inflaton mixing with supersymmetry breaking field

Energy Technology Data Exchange (ETDEWEB)

Endo, M.; Takahashi, F. [Deutsches Elektronen-Synchrotron (DESY), Hamburg (Germany)]|[Tokyo Univ. (Japan). Inst. for Cosmic Ray Research; Hamaguchi, K. [Deutsches Elektronen-Synchrotron (DESY), Hamburg (Germany)]|[Tokyo Univ. (Japan). Dept. of Physics

2006-05-15

A heavy scalar field such as moduli or an inflaton generally mixes with a field responsible for the supersymmetry breaking. We study the scalar decay into the standard model particles and their superpartners, gravitinos, and the supersymmetry breaking sector, particularly paying attention to decay modes that proceed via the mixing between the scalar and the supersymmetry breaking field. The impacts of the new decay processes on cosmological scenarios are also discussed; the modulus field generically produces too much gravitinos, and most of the inflation models tend to result in too high reheating temperature and/or gravitino overproduction. (Orig.)

Spontaneous symmetry breaking and its cosmological consequences

International Nuclear Information System (INIS)

Kobzarev, I.Yu.

1975-01-01

The concept of symmetry and of the spontaneous symmetry breaking are presented in popular form as applied to quantum physics. Though the presence of the spontaneous symmetry breaking is not proved directly for interactions of elementary particles, on considering the hypothesis of its presence as applied to the hot Universe theory a possibility of obtaining rather uncommon cosmological consequences is discussed. In particular, spontaneous symmetry breaking of vacuum and the rather hot Universe lead necessarily to the presence of the domain structure of the Universe with the surfase energy at the domain interface in the form of a real physical object

Modelling oil price volatility with structural breaks

International Nuclear Information System (INIS)

Salisu, Afees A.; Fasanya, Ismail O.

2013-01-01

In this paper, we provide two main innovations: (i) we analyze oil prices of two prominent markets namely West Texas Intermediate (WTI) and Brent using the two recently developed tests by Narayan and Popp (2010) and Liu and Narayan, 2010 both of which allow for two structural breaks in the data series; and (ii) the latter method is modified to include both symmetric and asymmetric volatility models. We identify two structural breaks that occur in 1990 and 2008 which coincidentally correspond to the Iraqi/Kuwait conflict and the global financial crisis, respectively. We find evidence of persistence and leverage effects in the oil price volatility. While further extensions can be pursued, the consideration of asymmetric effects as well as structural breaks should not be jettisoned when modelling oil price volatility. - Highlights: ► We analyze oil price volatility using NP (2010) and LN (2010) tests. ► We modify the LN (2010) to account for leverage effects in oil price. ► We find two structural breaks that reflect major global crisis in the oil market. ► We find evidence of persistence and leverage effects in oil price volatility. ► Leverage effects and structural breaks are fundamental in oil price modelling.

DNA strand breaks, repair, and survival in x-irradiated mammalian cells

International Nuclear Information System (INIS)

Dugle, D.L.; Gillespie, C.J.; Chapman, J.D.

1976-01-01

The yields of unrepairable single- and double-strand breaks in the DNA of x-irradiated Chinese hamster cells were measured by low-speed neutral and alkaline sucrose density gradient sedimentation in order to investigate the relation between these lesions and reproductive death. After maximal single-strand rejoining, at all doses, the number of residual single-strand breaks was twice the number of residual double-strand breaks. Both double-strand and unrepairable single-strand breaks were proportional to the square of absorbed dose, in the range 10-50 krad. No rejoining of double-strand breaks was observed. These observations suggest that, in mammalian cells, most double-strand breaks are not repairable, while all single-strand breaks are repaired except those that are sufficiently close on complementary strands to constitute double-strand breaks. Comparison with cell survival measurements at much lower doses suggests that loss of reproductive capacity corresponds to induction of approximately one double-strand break

Breaking Gaussian incompatibility on continuous variable quantum systems

Energy Technology Data Exchange (ETDEWEB)

Heinosaari, Teiko, E-mail: teiko.heinosaari@utu.fi [Turku Centre for Quantum Physics, Department of Physics and Astronomy, University of Turku, FI-20014 Turku (Finland); Kiukas, Jukka, E-mail: jukka.kiukas@aber.ac.uk [Department of Mathematics, Aberystwyth University, Penglais, Aberystwyth, SY23 3BZ (United Kingdom); Schultz, Jussi, E-mail: jussi.schultz@gmail.com [Turku Centre for Quantum Physics, Department of Physics and Astronomy, University of Turku, FI-20014 Turku (Finland); Dipartimento di Matematica, Politecnico di Milano, Piazza Leonardo da Vinci 32, I-20133 Milano (Italy)

2015-08-15

We characterise Gaussian quantum channels that are Gaussian incompatibility breaking, that is, transform every set of Gaussian measurements into a set obtainable from a joint Gaussian observable via Gaussian postprocessing. Such channels represent local noise which renders measurements useless for Gaussian EPR-steering, providing the appropriate generalisation of entanglement breaking channels for this scenario. Understanding the structure of Gaussian incompatibility breaking channels contributes to the resource theory of noisy continuous variable quantum information protocols.

Report of Break Out Group 1

DEFF Research Database (Denmark)

Alward, Randy; Carley, Kathleen M.; Madsen, Fredrik Huitfeldt

2006-01-01

, action" (OODA) loop. The break out group discussed vulnerability presentation needs common across various application domains, particularly in support of network discovery and network analysis tasks in those domains. Finally, the break out group wished to determine whether there is a means...... of characterizing a vulnerability. This would take into account the potential for the vulnerability to be exploited as well as the potential impact on the operations supported by the network, and on the network structure itself, of a successful exploit of that vulnerability.......To help understand a network and its ability to continue operating when under attack, the break out group discussed issues that need to be considered when presenting network vulnerability information to an analyst, manager or commander in effective support of that person's "observe, orient, decide...

Spatiotemporal neural characterization of prediction error valence and surprise during reward learning in humans.

Science.gov (United States)

Fouragnan, Elsa; Queirazza, Filippo; Retzler, Chris; Mullinger, Karen J; Philiastides, Marios G

2017-07-06

Reward learning depends on accurate reward associations with potential choices. These associations can be attained with reinforcement learning mechanisms using a reward prediction error (RPE) signal (the difference between actual and expected rewards) for updating future reward expectations. Despite an extensive body of literature on the influence of RPE on learning, little has been done to investigate the potentially separate contributions of RPE valence (positive or negative) and surprise (absolute degree of deviation from expectations). Here, we coupled single-trial electroencephalography with simultaneously acquired fMRI, during a probabilistic reversal-learning task, to offer evidence of temporally overlapping but largely distinct spatial representations of RPE valence and surprise. Electrophysiological variability in RPE valence correlated with activity in regions of the human reward network promoting approach or avoidance learning. Electrophysiological variability in RPE surprise correlated primarily with activity in regions of the human attentional network controlling the speed of learning. Crucially, despite the largely separate spatial extend of these representations our EEG-informed fMRI approach uniquely revealed a linear superposition of the two RPE components in a smaller network encompassing visuo-mnemonic and reward areas. Activity in this network was further predictive of stimulus value updating indicating a comparable contribution of both signals to reward learning.

Strongly coupled semidirect mediation of supersymmetry breaking

International Nuclear Information System (INIS)

Ibe, M.; Izawa, K.-I.; Nakai, Y.

2009-01-01

Strongly coupled semidirect gauge mediation models of supersymmetry breaking through massive mediators with standard-model charges are investigated by means of composite degrees of freedom. Sizable mediation is realized to generate the standard-model gaugino masses for a small mediator mass without breaking the standard-model symmetries.

Metastable Supersymmetry Breaking in a Cooling Universe

International Nuclear Information System (INIS)

Kaplunovsky, Vadim S.

2007-01-01

I put metastable supersymmetry breaking in a cosmological context. I argue that under reasonable assumptions, the cooling down early Universe favors metastable SUSY-breaking vacua over the stable supersymmetric vacua. To illustrate the general argument, I analyze the early-Universe history of the Intriligator-Seiberg-Shih model

New mechanisms of gauge-mediated supersymmetry breaking

International Nuclear Information System (INIS)

Randall, L.

1997-01-01

New mechanisms for the communication of supersymmetry breaking via gauge interactions are introduced. These models do not require complicated dynamics to induce a non-vanishing F term for a singlet. The first class of models communicates supersymmetry breaking to the visible sector through a ''mediator'' field that transforms under both a messenger gauge group of the dynamical supersymmetry breaking sector and the standard model gauge group. This model has a distinctive phenomenology; in particular, the scalar superpartners should be heavier than the gaugino superpartners by at least an order of magnitude. The second class of models has a phenomenology more similar to the ''standard'' messenger sectors. A singlet is incorporated, but the model does not require complicated mechanisms to generate a singlet F term. The role of the singlet is to couple fields from the dynamical symmetry breaking sector to fields transforming under the standard model gauge group. We also mention a potential solution to the μ problem. (orig.)

Unstable volatility functions: the break preserving local linear estimator

DEFF Research Database (Denmark)

Casas, Isabel; Gijbels, Irene

The objective of this paper is to introduce the break preserving local linear (BPLL) estimator for the estimation of unstable volatility functions. Breaks in the structure of the conditional mean and/or the volatility functions are common in Finance. Markov switching models (Hamilton, 1989......) and threshold models (Lin and Terasvirta, 1994) are amongst the most popular models to describe the behaviour of data with structural breaks. The local linear (LL) estimator is not consistent at points where the volatility function has a break and it may even report negative values for finite samples...

Repair pathways independent of the Fanconi anemia nuclear core complex play a predominant role in mitigating formaldehyde-induced DNA damage

International Nuclear Information System (INIS)

Noda, Taichi; Takahashi, Akihisa; Kondo, Natsuko; Mori, Eiichiro; Okamoto, Noritomo; Nakagawa, Yosuke; Ohnishi, Ken; Zdzienicka, Malgorzata Z.; Thompson, Larry H.; Helleday, Thomas; Asada, Hideo

2011-01-01

The role of the Fanconi anemia (FA) repair pathway for DNA damage induced by formaldehyde was examined in the work described here. The following cell types were used: mouse embryonic fibroblast cell lines FANCA -/- , FANCC -/- , FANCA -/- C -/- , FANCD2 -/- and their parental cells, the Chinese hamster cell lines FANCD1 mutant (mt), FANCGmt, their revertant cells, and the corresponding wild-type (wt) cells. Cell survival rates were determined with colony formation assays after formaldehyde treatment. DNA double strand breaks (DSBs) were detected with an immunocytochemical γH2AX-staining assay. Although the sensitivity of FANCA -/- , FANCC -/- and FANCA -/- C -/- cells to formaldehyde was comparable to that of proficient cells, FANCD1mt, FANCGmt and FANCD2 -/- cells were more sensitive to formaldehyde than the corresponding proficient cells. It was found that homologous recombination (HR) repair was induced by formaldehyde. In addition, γH2AX foci in FANCD1mt cells persisted for longer times than in FANCD1wt cells. These findings suggest that formaldehyde-induced DSBs are repaired by HR through the FA repair pathway which is independent of the FA nuclear core complex. -- Research highlights: → We examined to clarify the repair pathways of formaldehyde-induced DNA damage. Formaldehyde induces DNA double strand breaks (DSBs). → DSBs are repaired through the Fanconi anemia (FA) repair pathway. → This pathway is independent of the FA nuclear core complex. → We also found that homologous recombination repair was induced by formaldehyde.

CARFMAP: A Curated Pathway Map of Cardiac Fibroblasts.

Directory of Open Access Journals (Sweden)

Hieu T Nim

Full Text Available The adult mammalian heart contains multiple cell types that work in unison under tightly regulated conditions to maintain homeostasis. Cardiac fibroblasts are a significant and unique population of non-muscle cells in the heart that have recently gained substantial interest in the cardiac biology community. To better understand this renaissance cell, it is essential to systematically survey what has been known in the literature about the cellular and molecular processes involved. We have built CARFMAP (http://visionet.erc.monash.edu.au/CARFMAP, an interactive cardiac fibroblast pathway map derived from the biomedical literature using a software-assisted manual data collection approach. CARFMAP is an information-rich interactive tool that enables cardiac biologists to explore the large body of literature in various creative ways. There is surprisingly little overlap between the cardiac fibroblast pathway map, a foreskin fibroblast pathway map, and a whole mouse organism signalling pathway map from the REACTOME database. Among the use cases of CARFMAP is a common task in our cardiac biology laboratory of identifying new genes that are (1 relevant to cardiac literature, and (2 differentially regulated in high-throughput assays. From the expression profiles of mouse cardiac and tail fibroblasts, we employed CARFMAP to characterise cardiac fibroblast pathways. Using CARFMAP in conjunction with transcriptomic data, we generated a stringent list of six genes that would not have been singled out using bioinformatics analyses alone. Experimental validation showed that five genes (Mmp3, Il6, Edn1, Pdgfc and Fgf10 are differentially regulated in the cardiac fibroblast. CARFMAP is a powerful tool for systems analyses of cardiac fibroblasts, facilitating systems-level cardiovascular research.

CARFMAP: A Curated Pathway Map of Cardiac Fibroblasts.

Science.gov (United States)

Nim, Hieu T; Furtado, Milena B; Costa, Mauro W; Kitano, Hiroaki; Rosenthal, Nadia A; Boyd, Sarah E

2015-01-01

The adult mammalian heart contains multiple cell types that work in unison under tightly regulated conditions to maintain homeostasis. Cardiac fibroblasts are a significant and unique population of non-muscle cells in the heart that have recently gained substantial interest in the cardiac biology community. To better understand this renaissance cell, it is essential to systematically survey what has been known in the literature about the cellular and molecular processes involved. We have built CARFMAP (http://visionet.erc.monash.edu.au/CARFMAP), an interactive cardiac fibroblast pathway map derived from the biomedical literature using a software-assisted manual data collection approach. CARFMAP is an information-rich interactive tool that enables cardiac biologists to explore the large body of literature in various creative ways. There is surprisingly little overlap between the cardiac fibroblast pathway map, a foreskin fibroblast pathway map, and a whole mouse organism signalling pathway map from the REACTOME database. Among the use cases of CARFMAP is a common task in our cardiac biology laboratory of identifying new genes that are (1) relevant to cardiac literature, and (2) differentially regulated in high-throughput assays. From the expression profiles of mouse cardiac and tail fibroblasts, we employed CARFMAP to characterise cardiac fibroblast pathways. Using CARFMAP in conjunction with transcriptomic data, we generated a stringent list of six genes that would not have been singled out using bioinformatics analyses alone. Experimental validation showed that five genes (Mmp3, Il6, Edn1, Pdgfc and Fgf10) are differentially regulated in the cardiac fibroblast. CARFMAP is a powerful tool for systems analyses of cardiac fibroblasts, facilitating systems-level cardiovascular research.

An economic assessment of potential ethanol production pathways in Ireland

Energy Technology Data Exchange (ETDEWEB)

Deverell, Rory; McDonnell, Kevin; Ward, Shane; Devlin, Ger [Department of Biosystems Engineering, Agriculture and Food Science Building, University College Dublin 4, Belfield (Ireland)

2009-10-15

An economic assessment was conducted on five biomass-to-ethanol production pathways utilising the feedstock: wheat, triticale, sugarbeet, miscanthus and straw. The analysis includes the costs and margins for all the stakeholders along the economic chain. This analysis reveals that under current market situations in Ireland, the production of ethanol under the same tax regime as petrol makes it difficult to compete against that fuel, with tax breaks, however, it can compete against petrol. On the other hand, even under favourable tax breaks it will be difficult for indigenously produced ethanol to compete against cheaper sources of imported ethanol. Therefore, the current transport fuel market has no economic reason to consume indigenously produced ethanol made from the indigenously grown feedstock analysed at a price that reflects all the stakeholders' costs. To deliver a significant penetration of indigenous ethanol into the market would require some form of compulsory inclusion or else considerable financial supports to feedstock and ethanol producers. (author)

An economic assessment of potential ethanol production pathways in Ireland

International Nuclear Information System (INIS)

Deverell, Rory; McDonnell, Kevin; Ward, Shane; Devlin, Ger

2009-01-01

An economic assessment was conducted on five biomass-to-ethanol production pathways utilising the feedstock: wheat, triticale, sugarbeet, miscanthus and straw. The analysis includes the costs and margins for all the stakeholders along the economic chain. This analysis reveals that under current market situations in Ireland, the production of ethanol under the same tax regime as petrol makes it difficult to compete against that fuel, with tax breaks, however, it can compete against petrol. On the other hand, even under favourable tax breaks it will be difficult for indigenously produced ethanol to compete against cheaper sources of imported ethanol. Therefore, the current transport fuel market has no economic reason to consume indigenously produced ethanol made from the indigenously grown feedstock analysed at a price that reflects all the stakeholders' costs. To deliver a significant penetration of indigenous ethanol into the market would require some form of compulsory inclusion or else considerable financial supports to feedstock and ethanol producers.

Surprises and counterexamples in real function theory

CERN Document Server

Rajwade, A R

2007-01-01

This book presents a variety of intriguing, surprising and appealing topics and nonroutine theorems in real function theory. It is a reference book to which one can turn for finding that arise while studying or teaching analysis.Chapter 1 is an introduction to algebraic, irrational and transcendental numbers and contains the Cantor ternary set. Chapter 2 contains functions with extraordinary properties; functions that are continuous at each point but differentiable at no point. Chapters 4 and intermediate value property, periodic functions, Rolle's theorem, Taylor's theorem, points of tangents. Chapter 6 discusses sequences and series. It includes the restricted harmonic series, of alternating harmonic series and some number theoretic aspects. In Chapter 7, the infinite peculiar range of convergence is studied. Appendix I deal with some specialized topics. Exercises at the end of chapters and their solutions are provided in Appendix II.This book will be useful for students and teachers alike.

ROSA-III 100 % break integral test Run 914

International Nuclear Information System (INIS)

Yonomoto, Taisuke; Tasaka, Kanji; Koizumi, Yasuo; Anoda, Yoshinari; Kumamaru, Hiroshige; Nakamura, Hideo; Suzuki, Mitsuhiro; Murata, Hideo

1987-05-01

This report presents the experimental data of RUN 914 conducted at the ROSA-III test facility. The facility is a volumetrically scaled (1/424) simulator for a BWR/6 with the electrically heated core, the break simulator and the scaled ECCS (emergency core cooling system). RUN 914 was a 100% split break test at the recirculation pump suction line with an assumption of HPCS diesel generator failure and conducted as one of the break area parameter tests. A peak cladding temperature (PCT) of 851 K was reached at 130 s after the break during the reflooding phase. Whole core was completely quenched by ECCS, and the effectiveness of ECCS was confirmed. The primary test results of RUN 914 are compared in this report with those of RUN 926, which was a 200 % double-ended break test. The initiation of core dryout in RUN 914 was almost the same as that in RUN 926. Duration of core dryourt was, however, longer in RUN 914 because of later actuation of ECCSs. PCT in RUN 914 was 67 K higher than that in RUN 926. (author)

Evidence for SU(3) symmetry breaking from hyperon production

International Nuclear Information System (INIS)

Yang Jianjun

2002-01-01

We examine the SU(3) symmetry breaking in hyperon semileptonic decays (HSD) by considering two typical sets of quark contributions to the spin content of the octet baryons: set 1 with SU(3) flavor symmetry and set 2 with SU(3) flavor symmetry breaking in the HSD. The quark distributions of the octet baryons are calculated with a successful statistical model. Using an approximate relation between the quark fragmentation functions and the quark distributions, we predict the polarizations of the octet baryons produced in e + e - annihilation and semi-inclusive deep lepton-nucleon scattering in order to reveal the SU(3) symmetry breaking effect on the spin structure of the octet baryons. We find that the SU(3) symmetry breaking significantly affects the hyperon polarization. The available experimental data on the Λ polarization seem to favor the theoretical predictions with SU(3) symmetry breaking. We conclude that there is a possibility to get collateral evidence for SU(3) symmetry breaking from hyperon production. The theoretical errors for our predictions are discussed

New models of gauge- and gravity-mediated supersymmetry breaking

International Nuclear Information System (INIS)

Poppitz, E.; Trivedi, S.P.

1997-01-01

We show that supersymmetry breaking in a class of theories with SU(N)xSU(N-2) gauge symmetry can be studied in a calculable σ model. We use the σ model to show that the supersymmetry-breaking vacuum in these theories leaves a large subgroup of flavor symmetries intact, and to calculate the masses of the low-lying states. By embedding the standard model gauge groups in the unbroken flavor symmetry group we construct a class of models in which supersymmetry breaking is communicated by both gravitational and gauge interactions. One distinguishing feature of these models is that the messenger fields, responsible for the gauge-mediated communication of supersymmetry breaking, are an integral part of the supersymmetry-breaking sector. We also show how, by lowering the scale that suppresses the nonrenormalizable operators, a class of purely gauge-mediated models with a combined supersymmetry-breaking-cum-messenger sector can be built. We briefly discuss the phenomenological features of the models we construct. copyright 1997 The American Physical Society

38 CFR 17.100 - Refusal of treatment by unnecessarily breaking appointments.

Science.gov (United States)

2010-07-01

... and satisfactory reasons are advanced for breaking the appointment and circumstances were such that... unnecessarily breaking appointments. 17.100 Section 17.100 Pensions, Bonuses, and Veterans' Relief DEPARTMENT OF VETERANS AFFAIRS MEDICAL Breaking Appointments § 17.100 Refusal of treatment by unnecessarily breaking...

Amino acid chirality breaking by N-phosphorylation

International Nuclear Information System (INIS)

Zhao Yufen; Yan Qingjin.

1995-01-01

The chirality breaking of amino acid is a focus issue in the origin of life. For chemists, there are some interesting chemical approaches to solve the symmetry breaking problem. Our previous experiments indicated that when amino acids were phosphorylated, there were many bio-mimic reactions happened. In this paper, it was found that there had significant difference between the N-phosphoryl L- and D- amino acids such as serine and threonine. The optical rotation tracing experiments of the racemic N-phosphoamino acids also showed the similar results. The chirality breaking of amino acids by N-phosphorylation was a novel phenomena. (author). 3 refs, 1 fig. Abstract only

Fragmentation in DNA double-strand breaks

International Nuclear Information System (INIS)

Wei Zhiyong; Suzhou Univ., Suzhou; Zhang Lihui; Li Ming; Fan Wo; Xu Yujie

2005-01-01

DNA double strand breaks are important lesions induced by irradiations. Random breakage model or quantification supported by this concept is suitable to analyze DNA double strand break data induced by low LET radiation, but deviation from random breakage model is more evident in high LET radiation data analysis. In this work we develop a new method, statistical fragmentation model, to analyze the fragmentation process of DNA double strand breaks. After charged particles enter the biological cell, they produce ionizations along their tracks, and transfer their energies to the cells and break the cellular DNA strands into fragments. The probable distribution of the fragments is obtained under the condition in which the entropy is maximum. Under the approximation E≅E 0 + E 1 l + E 2 l 2 , the distribution functions are obtained as exp(αl + βl 2 ). There are two components, the one proportional to exp(βl 2 ), mainly contributes to the low mass fragment yields, the other component, proportional to exp(αl), decreases slowly as the mass of the fragments increases. Numerical solution of the constraint equations provides parameters α and β. Experimental data, especially when the energy deposition is higher, support the statistical fragmentation model. (authors)

Metabolic analysis of the soil microbe Dechloromonas aromatica str. RCB: indications of a surprisingly complex life-style and cryptic anaerobic pathways for aromatic degradation

Energy Technology Data Exchange (ETDEWEB)

Salinero, Kennan Kellaris; Keller, Keith; Feil, William S.; Feil, Helene; Trong, Stephan; Di Bartolo, Genevieve; Lapidus, Alla

2008-11-17

Initial interest in Dechloromonas aromatica strain RCB arose from its ability to anaerobically degrade benzene. It is also able to reduce perchlorate and oxidize chlorobenzoate, toluene, and xylene, creating interest in using this organism for bioremediation. Little physiological data has been published for this microbe. It is considered to be a free-living organism. The a priori prediction that the D. aromatica genome would contain previously characterized 'central' enzymes involved in anaerobic aromatic degradation proved to be false, suggesting the presence of novel anaerobic aromatic degradation pathways in this species. These missing pathways include the benzyl succinyl synthase (bssABC) genes (responsible for formate addition to toluene) and the central benzoylCoA pathway for monoaromatics. In depth analyses using existing TIGRfam, COG, and InterPro models, and the creation of de novo HMM models, indicate a highly complex lifestyle with a large number of environmental sensors and signaling pathways, including a relatively large number of GGDEF domain signal receptors and multiple quorum sensors. A number of proteins indicate interactions with an as yet unknown host, as indicated by the presence of predicted cell host remodeling enzymes, effector enzymes, hemolysin-like proteins, adhesins, NO reductase, and both type III and type VI secretory complexes. Evidence of biofilm formation including a proposed exopolysaccharide complex with the somewhat rare exosortase (epsH), is also present. Annotation described in this paper also reveals evidence for several metabolic pathways that have yet to be observed experimentally, including a sulphur oxidation (soxFCDYZAXB) gene cluster, Calvin cycle enzymes, and nitrogen fixation (including RubisCo, ribulose-phosphate 3-epimerase, and nif gene families, respectively). Analysis of the D. aromatica genome indicates there is much to be learned regarding the metabolic capabilities, and life-style, for this microbial

Metabolic analysis of the soil microbe Dechloromonas aromatica str. RCB: indications of a surprisingly complex life-style and cryptic anaerobic pathways for aromatic degradation

Directory of Open Access Journals (Sweden)

Feil Helene

2009-08-01

Full Text Available Abstract Background Initial interest in Dechloromonas aromatica strain RCB arose from its ability to anaerobically degrade benzene. It is also able to reduce perchlorate and oxidize chlorobenzoate, toluene, and xylene, creating interest in using this organism for bioremediation. Little physiological data has been published for this microbe. It is considered to be a free-living organism. Results The a priori prediction that the D. aromatica genome would contain previously characterized "central" enzymes to support anaerobic aromatic degradation of benzene proved to be false, suggesting the presence of novel anaerobic aromatic degradation pathways in this species. These missing pathways include the benzylsuccinate synthase (bssABC genes (responsible for fumarate addition to toluene and the central benzoyl-CoA pathway for monoaromatics. In depth analyses using existing TIGRfam, COG, and InterPro models, and the creation of de novo HMM models, indicate a highly complex lifestyle with a large number of environmental sensors and signaling pathways, including a relatively large number of GGDEF domain signal receptors and multiple quorum sensors. A number of proteins indicate interactions with an as yet unknown host, as indicated by the presence of predicted cell host remodeling enzymes, effector enzymes, hemolysin-like proteins, adhesins, NO reductase, and both type III and type VI secretory complexes. Evidence of biofilm formation including a proposed exopolysaccharide complex and exosortase (epsH are also present. Annotation described in this paper also reveals evidence for several metabolic pathways that have yet to be observed experimentally, including a sulphur oxidation (soxFCDYZAXB gene cluster, Calvin cycle enzymes, and proteins involved in nitrogen fixation in other species (including RubisCo, ribulose-phosphate 3-epimerase, and nif gene families, respectively. Conclusion Analysis of the D. aromatica genome indicates there is much to be

Workshop on electroweak symmetry breaking: proceedings

International Nuclear Information System (INIS)

Hinchliffe, I.

1984-10-01

A theoretical workshop on electroweak symmetry breaking at the Superconducting Supercollider was held at Lawrence Berkeley Laboratory, June 4-22, 1984. The purpose of the workshop was to focus theoretical attention on the ways in which experimentation at the SSC could reveal manifestations of the phenomenon responsible for electroweak symmetry breaking. This issue represents, at present, the most compelling scientific argument for the need to explore the energy region to be made accessible by the SSC, and a major aim of the workshop was to involve a broad cross section of particle theorists in the ongoing process of sharpening the requirements for both accelerator and detector design that will ensure detection and identification of meaningful signals, whatever form the electroweak symmetry breaking phenomenon should actually take. Separate entries were prepared for the data base for the papers presented

Workshop on electroweak symmetry breaking: proceedings

Energy Technology Data Exchange (ETDEWEB)

Hinchliffe, I. (ed.)

1984-10-01

A theoretical workshop on electroweak symmetry breaking at the Superconducting Supercollider was held at Lawrence Berkeley Laboratory, June 4-22, 1984. The purpose of the workshop was to focus theoretical attention on the ways in which experimentation at the SSC could reveal manifestations of the phenomenon responsible for electroweak symmetry breaking. This issue represents, at present, the most compelling scientific argument for the need to explore the energy region to be made accessible by the SSC, and a major aim of the workshop was to involve a broad cross section of particle theorists in the ongoing process of sharpening the requirements for both accelerator and detector design that will ensure detection and identification of meaningful signals, whatever form the electroweak symmetry breaking phenomenon should actually take. Separate entries were prepared for the data base for the papers presented.

On the ether-like Lorentz-breaking actions

International Nuclear Information System (INIS)

Petrov, A.Yu; Nascimento, J.R.; Gomes, M.; Silva, A. J. da

2011-01-01

We demonstrate the generation of the CPT-even, ether-like Lorentz-breaking actions for the scalar and electro-magnetic fields via their appropriate Lorentz-breaking coupling to spinor fields in three, four and five space-time dimensions. Besides, we show that the ether-like terms for the spinor field also can be generated as a consequence of the same couplings. The key result which will be presented here is the finiteness of the ether-like term for the electromagnetic field not only in three and five space-time dimensions where it is natural due to known effects of the dimensional regularization but also in four space-time dimensions. Moreover, we present the calculation of the last result within different calculational schemes and conclude that the result for the four-dimensional ether-like term for the electromagnetic field essentially depending on the calculation scheme, similarly to the result for the Carroll-Field-Jackiw (CFJ) term which probably signalizes a possibility for arising of a new anomaly. Also we discuss the dispersion relations in the theories with ether-like Lorentz-breaking terms which allows to discuss the consistency of the Lorentz-breaking modified theories for different (space-like or time-like) Lorentz-breaking vectors and find the tree-level effective (Breit) potential for fermion scattering and the one-loop effective potential corresponding to the action of the scalar field. (author)

Nonstandard Supersymmetry Breaking and Dirac Gaugino Masses without Supersoftness

Energy Technology Data Exchange (ETDEWEB)

Martin, Stephen P. [Northern Illinois U.

2015-08-05

I consider models in which nonstandard supersymmetry-breaking terms, including Dirac gaugino masses, arise from F-term breaking mediated by operators with a 1/M3 suppression. In these models, the supersoft properties found in the case of D-term breaking are absent in general, but can be obtained as a special case that is a fixed point of the renormalization group equations. The μ term is replaced by three distinct supersymmetry-breaking parameters, decoupling the Higgs scalar potential from the Higgsino masses. Both holomorphic and nonholomorphic scalar cubic interactions with minimal flavor violation are induced in the supersymmetric Standard Model Lagrangian.

Break the "wall" and become creative: Enacting embodied metaphors in virtual reality.

Science.gov (United States)

Wang, Xinyue; Lu, Kelong; Runco, Mark A; Hao, Ning

2018-07-01

This study investigated whether the experience of "breaking the walls", the embodiment of the metaphor "breaking the rules", could enhance creative performance. The virtual reality technology was used to simulate the scenario where participants could "break the walls" while walking in a corridor. Participants were asked to solve the creativity-demanding problems (ie., alternative uses tasks, AUT) in either the "break" condition in which they had to break the walls to move forward in VR, or the "no-break" condition where no barrier walls would appear. Results showed higher AUT originality and AUT fluency in the "break" condition than in the "no-break" condition. Moreover, the effects of "breaking the walls" on AUT originality were fully mediated by cognitive flexibility and persistence. These findings may indicate that enacting metaphors such as "breaking the rules" contribute to creative performance. The enhanced cognitive flexibility and persistence may account for the benefits. Copyright © 2018 Elsevier Inc. All rights reserved.

Chiral symmetry breaking and confinement - solutions of relativistic wave equations

International Nuclear Information System (INIS)

Murugesan, P.

1983-01-01

In this thesis, an attempt is made to explore the question whether confinement automatically leads to chiral symmetry breaking. While it should be accepted that chiral symmetry breaking manifests in nature in the absence of scalar partners of pseudoscalar mesons, it does not necessarily follow that confinement should lead to chiral symmetry breaking. If chiral conserving forces give rise to observed spectrum of hadrons, then the conjuncture that confinement is responsible for chiral symmetry breaking is not valid. The method employed to answer the question whether confinement leads to chiral symmetry breaking or not is to solve relativistic wave equations by introducing chiral conserving as well as chiral breaking confining potentials and compare the results with experimental observations. It is concluded that even though chiral symmetry is broken in nature, confinement of quarks need not be the cause of it

Break-even analysis in a nurse-managed center.

Science.gov (United States)

McBryde-Foster, Merry J

2005-01-01

The concept of break-even analysis as a financial assessment tool is defined and demonstrated in evaluation of a proposed nurse-managed center. The advantages of using break-even analysis during proposal development are explored.

Sparticle spectrum and constraints in anomaly mediated supersymmetry breaking models

International Nuclear Information System (INIS)

Huitu, K.; Laamanen, J.; Pandita, P.N.

2002-01-01

We study in detail the particle spectrum in anomaly mediated supersymmetry breaking models in which supersymmetry breaking terms are induced by the super-Weyl anomaly. We investigate the minimal anomaly mediated supersymmetry breaking models, gaugino assisted supersymmetry breaking models, as well as models with additional residual nondecoupling D-term contributions due to an extra U(1) gauge symmetry at a high energy scale. We derive sum rules for the sparticle masses in these models which can help in differentiating between them. We also obtain the sparticle spectrum numerically, and compare and contrast the results so obtained for the different types of anomaly mediated supersymmetry breaking models

Fast Times During Spring Breaks: Are Traffic Fatalities Another Consequence?

OpenAIRE

French, Michael; Gumus, Gulcin

2014-01-01

Every year in the United States, millions of college students travel for spring break, spending billions of dollars. We examine a potential adverse consequence of spring break that has received little attention in the literature - traffic safety. In particular, we estimate the impact of spring break season on fatal passenger vehicle crashes. Using daily county-level longitudinal data on traffic fatalities in popular spring break destinations from 1982-2011, we conduct separate analyses by age...

When does taking a break help in negotiations? The influence of breaks and social motivation on negotiation processes and outcomes

NARCIS (Netherlands)

Harinck, F.; de Dreu, C.K.W.

2011-01-01

Most negotiations are interrupted from time to time to reflect on the negotiation or to do other pressing tasks. This study investigated how these breaks and the thoughts during these breaks influence subsequent negotiation behavior. Prosocially motivated dyads, with a tendency to think

Structural changes in transition economies: breaking the news or breaking the ice?

Czech Academy of Sciences Publication Activity Database

Égert, B.; Jiménez-Rodríguez, R.; Kočenda, Evžen; Morales-Zumaquero, A.

-, č. 16 (2006), s. 1-15 Institutional research plan: CEZ:AV0Z70850503 Keywords : transition countries * structural break * volatility Subject RIV: AH - Economics http://deepblue.lib.umich.edu/bitstream/2027.42/41234/1/IPC-working-paper-016-Kocenda.pdf

Charge and color breaking minima in supersymmetric models

International Nuclear Information System (INIS)

Brhlik, Michal

2001-01-01

Supersymmetric extensions of the Standard Model include complicated scalar sectors leading to the possible occurrence of non-standard minima along suitable directions in the field space. These minima usually break charge and/or color and their presence in the theory would require an explanation why the universe has settled in the standard electroweak symmetry breaking minimum. In this talk I illustrate the relevance of the charge and color breaking minima in the framework of the minimal supergravity model and a string motivated Horava-Witten scenario

The Fanconi anemia pathway limits the severity of mutagenesis.

Science.gov (United States)

Hinz, John M; Nham, Peter B; Salazar, Edmund P; Thompson, Larry H

2006-08-13

Fanconi anemia (FA) is a developmental and cancer predisposition disorder in which key, yet unknown, physiological events promoting chromosome stability are compromised. FA cells exhibit excess metaphase chromatid breaks and are universally hypersensitive to DNA interstrand crosslinking agents. Published mutagenesis data from single-gene mutation assays show both increased and decreased mutation frequencies in FA cells. In this review we discuss the data from the literature and from our isogenic fancg knockout hamster CHO cells, and interpret these data within the framework of a molecular model that accommodates these seemingly divergent observations. In FA cells, reduced rates of recovery of viable X-linked hypoxanthine phosphoribosyltransferase (hprt) mutants are characteristically observed for diverse mutagenic agents, but also in untreated cultures, indicating the relevance of the FA pathway for processing assorted DNA lesions. We ascribe these reductions to: (1) impaired mutagenic translesion synthesis within hprt during DNA replication and (2) lethality of mutant cells following replication fork breakage on the X chromosome, caused by unrepaired double-strand breaks or large deletions/translocations encompassing essential genes flanking hprt. These findings, along with studies showing increased spontaneous mutability of FA cells at two autosomal loci, support a model in which FA proteins promote both translesion synthesis at replication-blocking lesions and repair of broken replication forks by homologous recombination and DNA end joining. The essence of this model is that the FANC protein pathway serves to restrict the severity of mutational outcome by favoring base substitutions and small deletions over larger deletions and chromosomal rearrangements.

Surprises in the suddenly-expanded infinite well

International Nuclear Information System (INIS)

Aslangul, Claude

2008-01-01

I study the time evolution of a particle prepared in the ground state of an infinite well after the latter is suddenly expanded. It turns out that the probability density |Ψ(x, t)| 2 shows up quite a surprising behaviour: for definite times, plateaux appear for which |Ψ(x, t)| 2 is constant on finite intervals for x. Elements of theoretical explanation are given by analysing the singular component of the second derivative ∂ xx Ψ(x, t). Analytical closed expressions are obtained for some specific times, which easily allow us to show that, at these times, the density organizes itself into regular patterns provided the size of the box is large enough; more, above some critical size depending on the specific time, the density patterns are independent of the expansion parameter. It is seen how the density at these times simply results from a construction game with definite rules acting on the pieces of the initial density

Large eddy simulation of breaking waves

DEFF Research Database (Denmark)

Christensen, Erik Damgaard; Deigaard, Rolf

2001-01-01

A numerical model is used to simulate wave breaking, the large scale water motions and turbulence induced by the breaking process. The model consists of a free surface model using the surface markers method combined with a three-dimensional model that solves the flow equations. The turbulence....... The incoming waves are specified by a flux boundary condition. The waves are approaching in the shore-normal direction and are breaking on a plane, constant slope beach. The first few wave periods are simulated by a two-dimensional model in the vertical plane normal to the beach line. The model describes...... the steepening and the overturning of the wave. At a given instant, the model domain is extended to three dimensions, and the two-dimensional flow field develops spontaneously three-dimensional flow features with turbulent eddies. After a few wave periods, stationary (periodic) conditions are achieved...

Breaking bad news among cancer physicians

Directory of Open Access Journals (Sweden)

Sami Ayed Alshammary

2017-01-01

Full Text Available Background: Breaking bad news to patients with cancer diagnosis is not an easy task for physicians. The diagnosis must be explicitly stated and understood, and prognosis must be well-discussed in the most gentle and comfortable manner. It is important that the disclosure is performed in a way that patients will not lose all hope and get very depressed, leading them to undergo an abrupt change of their outlook in life. Objective: The aim of this study was to explore the physicians' perceptions and perspectives of breaking bad news to cancer patients. Methods: A cross-sectional survey of all comprehensive cancer centre physicians currently working in a university teaching hospital in the Middle East was conducted from August to September 2016. Results: Sixty-eight percent responded to the survey. Eighty-four percent were comfortable with breaking bad news, and 70% had training in breaking bad news. Eighty-six percent of responders stated that patients should be told about their cancer. Almost 30% of the respondents stated that they would still disclose the diagnosis to patients even if it would be against the preference of the relatives. Nearly 61% said that they would only tell the details to the patients if asked while 67% of them disagreed that patients should be told about the diagnoses only if the relatives consent. About 51% of physicians wanted to discuss the bad news with the family members and patient together, whereas 24% stated that the patient alone should be involved in the discussion. Conclusion: Physicians face a dilemma when families do not wish the patient to know the cancer diagnosis and this highlights the necessity of taking into consideration the social circumstances in healthcare. When taking these into considerations, curriculum in the medical school must, therefore, be updated and must integrate the acquisition of skills in breaking bad news early in training.

Quantum break-time of de Sitter

Energy Technology Data Exchange (ETDEWEB)

Dvali, Gia; Gómez, César; Zell, Sebastian, E-mail: georgi.dvali@physik.uni-muenchen.de, E-mail: cesar.gomez@uam.es, E-mail: sebastian.zell@campus.lmu.de [Arnold Sommerfeld Center, Ludwig-Maximilians-Universität, Theresienstraße 37, 80333 München (Germany)

2017-06-01

The quantum break-time of a system is the time-scale after which its true quantum evolution departs from the classical mean field evolution. For capturing it, a quantum resolution of the classical background—e.g., in terms of a coherent state—is required. In this paper, we first consider a simple scalar model with anharmonic oscillations and derive its quantum break-time. Next, following [1], we apply these ideas to de Sitter space. We formulate a simple model of a spin-2 field, which for some time reproduces the de Sitter metric and simultaneously allows for its well-defined representation as quantum coherent state of gravitons. The mean occupation number N of background gravitons turns out to be equal to the de Sitter horizon area in Planck units, while their frequency is given by the de Sitter Hubble parameter. In the semi-classical limit, we show that the model reproduces all the known properties of de Sitter, such as the redshift of probe particles and thermal Gibbons-Hawking radiation, all in the language of quantum S -matrix scatterings and decays of coherent state gravitons. Most importantly, this framework allows to capture the 1/ N -effects to which the usual semi-classical treatment is blind. They violate the de Sitter symmetry and lead to a finite quantum break-time of the de Sitter state equal to the de Sitter radius times N . We also point out that the quantum-break time is inversely proportional to the number of particle species in the theory. Thus, the quantum break-time imposes the following consistency condition: older and species-richer universes must have smaller cosmological constants. For the maximal, phenomenologically acceptable number of species, the observed cosmological constant would saturate this bound if our Universe were 10{sup 100} years old in its entire classical history.

Quantum break-time of de Sitter

Science.gov (United States)

Dvali, Gia; Gómez, César; Zell, Sebastian

2017-06-01

The quantum break-time of a system is the time-scale after which its true quantum evolution departs from the classical mean field evolution. For capturing it, a quantum resolution of the classical background—e.g., in terms of a coherent state—is required. In this paper, we first consider a simple scalar model with anharmonic oscillations and derive its quantum break-time. Next, following [1], we apply these ideas to de Sitter space. We formulate a simple model of a spin-2 field, which for some time reproduces the de Sitter metric and simultaneously allows for its well-defined representation as quantum coherent state of gravitons. The mean occupation number N of background gravitons turns out to be equal to the de Sitter horizon area in Planck units, while their frequency is given by the de Sitter Hubble parameter. In the semi-classical limit, we show that the model reproduces all the known properties of de Sitter, such as the redshift of probe particles and thermal Gibbons-Hawking radiation, all in the language of quantum S-matrix scatterings and decays of coherent state gravitons. Most importantly, this framework allows to capture the 1/N-effects to which the usual semi-classical treatment is blind. They violate the de Sitter symmetry and lead to a finite quantum break-time of the de Sitter state equal to the de Sitter radius times N. We also point out that the quantum-break time is inversely proportional to the number of particle species in the theory. Thus, the quantum break-time imposes the following consistency condition: older and species-richer universes must have smaller cosmological constants. For the maximal, phenomenologically acceptable number of species, the observed cosmological constant would saturate this bound if our Universe were 10100 years old in its entire classical history.

The DNA-dependent protein kinase: a multifunctional protein kinase with roles in DNA double strand break repair and mitosis

OpenAIRE

Jette, Nicholas; Lees-Miller, Susan P.

2014-01-01

The DNA-dependent protein kinase (DNA-PK) is a serine/threonine protein kinase composed of a large catalytic subunit (DNA-PKcs) and the Ku70/80 heterodimer. Over the past two decades, significant progress has been made in elucidating the role of DNA-PK in non-homologous end joining (NHEJ), the major pathway for repair of ionizing radiation-induced DNA double strand breaks in human cells and recently, additional roles for DNA-PK have been reported. In this review, we will describe the biochemi...

ROSA-III 50 % break integral test RUN 916

International Nuclear Information System (INIS)

Yonomoto, Taisuke; Tasaka, Kanji; Koizumi, Yasuo; Anoda, Yoshinari; Kumamaru, Hiroshige; Nakamura, Hideo; Suzuki, Mitsuhiro; Murata, Hideo

1985-08-01

This report presents the experimental data of RUN 916 conducted at the ROSA-III test facility. The facility is a volumetrically scaled (1/424) simulator for a BWR/6 with the electrically heated core, the break simulator and the scaled ECCS(emergency core cooling system). RUN 916 was a 50 % split break test at the recirculation pump suction line with an assumption of HPCS diegel generator failure and conducted as one of the break area parameter tests. A peak cladding temperature (PCT) of 917 K was reached at 190 s after the break during the reflooding phase. Whole core was completely quenched by ECCS, and the effectiveness of ECCS was confermed. The primary test results of RUN 916 are compared in this report with those of RUN 926, which was a 200 % double-ended break test. The initiation of core dryout in RUN 916 was later than that in RUN 926 because of the smaller discharge flow rate. Duration of core dryourt was, however, longer in RUN 916 because of later actuation of ECCSs. PCT in RUN 916 was 133 K higher than that in RUN 926. (author)

Time-reversal symmetry breaking in quantum billiards

Energy Technology Data Exchange (ETDEWEB)

Schaefer, Florian

2009-01-26

The present doctoral thesis describes experimentally measured properties of the resonance spectra of flat microwave billiards with partially broken timereversal invariance induced by an embedded magnetized ferrite. A vector network analyzer determines the complex scattering matrix elements. The data is interpreted in terms of the scattering formalism developed in nuclear physics. At low excitation frequencies the scattering matrix displays isolated resonances. At these the effect of the ferrite on isolated resonances (singlets) and pairs of nearly degenerate resonances (doublets) is investigated. The hallmark of time-reversal symmetry breaking is the violation of reciprocity, i.e. of the symmetry of the scattering matrix. One finds that reciprocity holds in singlets; it is violated in doublets. This is modeled by an effective Hamiltonian of the resonator. A comparison of the model to the data yields time-reversal symmetry breaking matrix elements in the order of the level spacing. Their dependence on the magnetization of the ferrite is understood in terms of its magnetic properties. At higher excitation frequencies the resonances overlap and the scattering matrix elements fluctuate irregularly (Ericson fluctuations). They are analyzed in terms of correlation functions. The data are compared to three models based on random matrix theory. The model by Verbaarschot, Weidenmueller and Zirnbauer describes time-reversal invariant scattering processes. The one by Fyodorov, Savin and Sommers achieves the same for systems with complete time-reversal symmetry breaking. An extended model has been developed that accounts for partial breaking of time-reversal invariance. This extended model is in general agreement with the data, while the applicability of the other two models is limited. The cross-correlation function between forward and backward reactions determines the time-reversal symmetry breaking matrix elements of the Hamiltonian to up to 0.3 mean level spacings. Finally

Time-reversal symmetry breaking in quantum billiards

International Nuclear Information System (INIS)

Schaefer, Florian

2009-01-01

The present doctoral thesis describes experimentally measured properties of the resonance spectra of flat microwave billiards with partially broken timereversal invariance induced by an embedded magnetized ferrite. A vector network analyzer determines the complex scattering matrix elements. The data is interpreted in terms of the scattering formalism developed in nuclear physics. At low excitation frequencies the scattering matrix displays isolated resonances. At these the effect of the ferrite on isolated resonances (singlets) and pairs of nearly degenerate resonances (doublets) is investigated. The hallmark of time-reversal symmetry breaking is the violation of reciprocity, i.e. of the symmetry of the scattering matrix. One finds that reciprocity holds in singlets; it is violated in doublets. This is modeled by an effective Hamiltonian of the resonator. A comparison of the model to the data yields time-reversal symmetry breaking matrix elements in the order of the level spacing. Their dependence on the magnetization of the ferrite is understood in terms of its magnetic properties. At higher excitation frequencies the resonances overlap and the scattering matrix elements fluctuate irregularly (Ericson fluctuations). They are analyzed in terms of correlation functions. The data are compared to three models based on random matrix theory. The model by Verbaarschot, Weidenmueller and Zirnbauer describes time-reversal invariant scattering processes. The one by Fyodorov, Savin and Sommers achieves the same for systems with complete time-reversal symmetry breaking. An extended model has been developed that accounts for partial breaking of time-reversal invariance. This extended model is in general agreement with the data, while the applicability of the other two models is limited. The cross-correlation function between forward and backward reactions determines the time-reversal symmetry breaking matrix elements of the Hamiltonian to up to 0.3 mean level spacings. Finally

Comparison of growth factor signalling pathway utilisation in cultured normal melanocytes and melanoma cell lines

International Nuclear Information System (INIS)

Kim, Ji Eun; Stones, Clare; Joseph, Wayne R; Leung, Euphemia; Finlay, Graeme J; Shelling, Andrew N; Phillips, Wayne A; Shepherd, Peter R; Baguley, Bruce C

2012-01-01

The phosphatidylinositol-3-kinase (PI3K-PKB), mitogen activated protein kinase (MEK-ERK) and the mammalian target of rapamycin (mTOR- p70S6K), are thought to regulate many aspects of tumour cell proliferation and survival. We have examined the utilisation of these three signalling pathways in a number of cell lines derived from patients with metastatic malignant melanoma of known PIK3CA, PTEN, NRAS and BRAF mutational status. Western blotting was used to compare the phosphorylation status of components of the PI3K-PKB, MEK-ERK and mTOR-p70S6K signalling pathways, as indices of pathway utilisation. Normal melanocytes could not be distinguished from melanoma cells on the basis of pathway utilisation when grown in the presence of serum, but could be distinguished upon serum starvation, where signalling protein phosphorylation was generally abrogated. Surprisingly, the differential utilisation of individual pathways was not consistently associated with the presence of an oncogenic or tumour suppressor mutation of genes in these pathways. Utilisation of the PI3K-PKB, MEK-ERK and mTOR-p70S6K signalling pathways in melanoma, as determined by phosphorylation of signalling components, varies widely across a series of cell lines, and does not directly reflect mutation of genes coding these components. The main difference between cultured normal melanocytes and melanoma cells is not the pathway utilisation itself, but rather in the serum dependence of pathway utilisation

Spontaneous symmetry breaking, self-trapping, and Josephson oscillations

CERN Document Server

2013-01-01

This volume collects a a number of contributions on spontaneous symmetry breaking. Current studies in this general field are going ahead at a full speed. The book present review chapters which give an overview on the major break throughs of recent years. It covers a number of different physical settings which are introduced when a nonlinearity is added to the underlying symmetric problems and its strength exceeds a certain critical value. The corresponding loss of symmetry, called spontaneous symmetry breaking, alias self-trapping into asymmetric states is extensively discussed in this book.

Breaking Bad Habits | NIH MedlinePlus the Magazine

Science.gov (United States)

... of this page please turn Javascript on. Feature: Bad Habits Breaking Bad Habits: Why It's So Hard to Change Past Issues / ... News in Health ( http://newsinhealth.nih.gov/ ) Break Bad Habits Avoid temptations. If you always stop for a ...

View of industry on the impact of pipe break criteria

International Nuclear Information System (INIS)

Bernsen, S.A.

1983-01-01

Historically, large pipe breaks in the types of materials used and under operating conditions similar to those in light water reactor service have not occurred. Nevertheless, the non-mechanistic assumption of a double ended pipe break of the early sixties, selected for loss of coolant accident analysis purposes, has become a mechanistic criterion for the design and arrangement of high pressure piping systems and their associated supports and enclosures in today's nuclear plants. While it seems reasonable and appropriate to continue to design the Emergency Core Cooling Systems for a range of loss of coolant accidents up to and including those that approximate the area of the largest pipe connected to the reactor vessel and to use this break in determining the loading and temperature rise rate for containment structures and equipment qualification, it no longer seems reasonable to provide precisely engineered break protection for a limited number of potential pipe break locations. This observation is gaining increasing support, particularly as engineering judgment and historical perspectives are being supplemented by both deterministic and probabilistic studies that indicate the potential for large instantaneous breaks in nuclear grade piping systems is virtually incredible. Fracture mechanics analyses support leak-before-break assumptions with wide margins and probabilistic studies indicate potentials for double-ended pipe breaks in the range of less than one in a billion years

Pathways, Pitfalls and Opportunities in Partnerships for Development

DEFF Research Database (Denmark)

Christensen, David; Vanhill, Josefine; Wolf, Andreas

The municipal solid waste management systems of many developing countries are commonly constrained by factors such as limited financial resources and poor governance, making it a difficult proposition to break with complex, entrenched and unsustainable technologies and systems. This paper...... some lessons in such partnership building: In Uganda and Denmark respectively, the World Wildlife Fund and the network-administrating organization access2innovation have attempted to mobilize stakeholders around improving the municipal solid waste system in the rural district capital of Kasese. Through...... a municipal solid waste system characterization and mapping exercise, some emergent lessons and guiding principles in partnership building point to both pitfalls and opportunities for designing sustainable pathways....

The Impact of Hedgehog Signaling Pathway on DNA Repair Mechanisms in Human Cancer

International Nuclear Information System (INIS)

Meng, Erhong; Hanna, Ann; Samant, Rajeev S.; Shevde, Lalita A.

2015-01-01

Defined cellular mechanisms have evolved that recognize and repair DNA to protect the integrity of its structure and sequence when encountering assaults from endogenous and exogenous sources. There are five major DNA repair pathways: mismatch repair, nucleotide excision repair, direct repair, base excision repair and DNA double strand break repair (including non-homologous end joining and homologous recombination repair). Aberrant activation of the Hedgehog (Hh) signaling pathway is a feature of many cancer types. The Hh pathway has been documented to be indispensable for epithelial-mesenchymal transition, invasion and metastasis, cancer stemness, and chemoresistance. The functional transcription activators of the Hh pathway include the GLI proteins. Inhibition of the activity of GLI can interfere with almost all DNA repair types in human cancer, indicating that Hh/GLI functions may play an important role in enabling tumor cells to survive lethal types of DNA damage induced by chemotherapy and radiotherapy. Thus, Hh signaling presents an important therapeutic target to overcome DNA repair-enabled multi-drug resistance and consequently increase chemotherapeutic response in the treatment of cancer

The Impact of Hedgehog Signaling Pathway on DNA Repair Mechanisms in Human Cancer

Energy Technology Data Exchange (ETDEWEB)

Meng, Erhong; Hanna, Ann; Samant, Rajeev S.; Shevde, Lalita A., E-mail: lsamant@uab.edu [Department of Pathology, Comprehensive Cancer Center, University of Alabama at Birmingham, WTI320D, 1824 6th Avenue South, Birmingham, AL 35233 (United States)

2015-07-21

Defined cellular mechanisms have evolved that recognize and repair DNA to protect the integrity of its structure and sequence when encountering assaults from endogenous and exogenous sources. There are five major DNA repair pathways: mismatch repair, nucleotide excision repair, direct repair, base excision repair and DNA double strand break repair (including non-homologous end joining and homologous recombination repair). Aberrant activation of the Hedgehog (Hh) signaling pathway is a feature of many cancer types. The Hh pathway has been documented to be indispensable for epithelial-mesenchymal transition, invasion and metastasis, cancer stemness, and chemoresistance. The functional transcription activators of the Hh pathway include the GLI proteins. Inhibition of the activity of GLI can interfere with almost all DNA repair types in human cancer, indicating that Hh/GLI functions may play an important role in enabling tumor cells to survive lethal types of DNA damage induced by chemotherapy and radiotherapy. Thus, Hh signaling presents an important therapeutic target to overcome DNA repair-enabled multi-drug resistance and consequently increase chemotherapeutic response in the treatment of cancer.

String breaking with Wilson loops?

CERN Document Server

Kratochvila, S; Kratochvila, Slavo; Forcrand, Philippe de

2003-01-01

A convincing, uncontroversial observation of string breaking, when the static potential is extracted from Wilson loops only, is still missing. This failure can be understood if the overlap of the Wilson loop with the broken string is exponentially small. In that case, the broken string ground state will only be seen if the Wilson loop is long enough. Our preliminary results show string breaking in the context of the 3d SU(2) adjoint static potential, using the L\\"uscher-Weisz exponential variance reduction approach. As a by-product, we measure the fundamental SU(2) static potential with improved accuracy and see clear deviations from Casimir scaling.

What records have we been breaking?

Science.gov (United States)

Bartholow, J.M.; Milhous, R.

2002-01-01

"Today was another record-breaking day," the evening radio or television declares. High temperatures, low temperatures, floods, drought - take your choice. But how can we put these pronouncements in perspective? What do they really mean?We present two types of information in this article: 1) an analysis of daily air temperature and precipitation for Fort Collins and 2) an analysis of annual precipitation for Fort Collins. Each analysis provides a different meaning to the statement about a record-breaking day or year.

Repair pathways independent of the Fanconi anemia nuclear core complex play a predominant role in mitigating formaldehyde-induced DNA damage

Energy Technology Data Exchange (ETDEWEB)

Noda, Taichi [Department of Biology, School of Medicine, Nara Medical University, 840 Shijo-cho, Kashihara, Nara 634-8521 (Japan); Department of Dermatology, School of Medicine, Nara Medical University, 840 Shijo-cho, Kashihara, Nara 634-8521 (Japan); Takahashi, Akihisa [Department of Biology, School of Medicine, Nara Medical University, 840 Shijo-cho, Kashihara, Nara 634-8521 (Japan); Kondo, Natsuko [Particle Radiation Oncology Research Center, Research Reactor Institute, Kyoto University, Kumatori-cho, Sennan-gun, Osaka 590-0494 (Japan); Mori, Eiichiro [Department of Biology, School of Medicine, Nara Medical University, 840 Shijo-cho, Kashihara, Nara 634-8521 (Japan); Okamoto, Noritomo [Department of Otorhinolaryngology, School of Medicine, Nara Medical University, 840 Shijo-cho, Kashihara, Nara 634-8521 (Japan); Nakagawa, Yosuke [Department of Oral and Maxillofacial Surgery, School of Medicine, Nara Medical University, 840 Shijo-cho, Kashihara, Nara 634-8521 (Japan); Ohnishi, Ken [Department of Biology, Ibaraki Prefectual University of Health Sciences, 4669-2 Ami, Ami-mati, Inasiki-gun, Ibaraki 300-0394 (Japan); Zdzienicka, Malgorzata Z. [Department of Molecular Cell Genetics, Collegium Medicum in Bydgoszcz, Nicolaus-Copernicus-University in Torun, ul. Sklodowskiej-Curie 9, 85-094 Bydgoszcz (Poland); Thompson, Larry H. [Biosciences and Biotechnology Division, L452, Lawrence Livermore National Laboratory, P.O. Box 808, Livermore, CA 94551-0808 (United States); Helleday, Thomas [Gray Institute for Radiation Oncology and Biology, University of Oxford, Old Road Campus Research Building, Off Roosevelt Drive, Oxford, OX3 7DQ (United Kingdom); Department of Genetics, Microbiology and Toxicology Stockholm University, SE-106 91 Stockholm (Sweden); Asada, Hideo [Department of Dermatology, School of Medicine, Nara Medical University, 840 Shijo-cho, Kashihara, Nara 634-8521 (Japan); and others

2011-01-07

The role of the Fanconi anemia (FA) repair pathway for DNA damage induced by formaldehyde was examined in the work described here. The following cell types were used: mouse embryonic fibroblast cell lines FANCA{sup -/-}, FANCC{sup -/-}, FANCA{sup -/-}C{sup -/-}, FANCD2{sup -/-} and their parental cells, the Chinese hamster cell lines FANCD1 mutant (mt), FANCGmt, their revertant cells, and the corresponding wild-type (wt) cells. Cell survival rates were determined with colony formation assays after formaldehyde treatment. DNA double strand breaks (DSBs) were detected with an immunocytochemical {gamma}H2AX-staining assay. Although the sensitivity of FANCA{sup -/-}, FANCC{sup -/-} and FANCA{sup -/-}C{sup -/-} cells to formaldehyde was comparable to that of proficient cells, FANCD1mt, FANCGmt and FANCD2{sup -/-} cells were more sensitive to formaldehyde than the corresponding proficient cells. It was found that homologous recombination (HR) repair was induced by formaldehyde. In addition, {gamma}H2AX foci in FANCD1mt cells persisted for longer times than in FANCD1wt cells. These findings suggest that formaldehyde-induced DSBs are repaired by HR through the FA repair pathway which is independent of the FA nuclear core complex. -- Research highlights: {yields} We examined to clarify the repair pathways of formaldehyde-induced DNA damage. Formaldehyde induces DNA double strand breaks (DSBs). {yields} DSBs are repaired through the Fanconi anemia (FA) repair pathway. {yields} This pathway is independent of the FA nuclear core complex. {yields} We also found that homologous recombination repair was induced by formaldehyde.

Relevance of the Fanconi anemia genetic stability pathway to formation and processing of double-strand breaks (DSBs)

International Nuclear Information System (INIS)

Thompson, L.H.; Tebbs, R.S.; Hinz, J.M.; Yamada, N.A.; Salazar, E.P.; Jones, I.M.; Jones, N.J.; Limoli, C.L.

2003-01-01

Although the exact functions of the FA proteins are largely unknown, a nuclear complex containing the A, C, E, F, and G proteins appears necessary for resistance to mitomycin C (MMC). FANCD1/BRCA2 is directly involved in DSB repair by homologous recombination, and ATM phosphorylates FANCD2 in response to ionizing radiation. We constructed a knockout mutation of the hemizygous FancG gene in CHO cells, which have a relatively stable subdiploid karyotype. A knockout clone (FGKO40) was isolated from a pool of ∼100 clones after screening ∼30,000 clones by PCR analysis. FGKO40 cells grow robustly; their doubling time is ∼8% slower than wild-type cells, and the plating efficiency and cell cycle distribution are normal. Survival curves show that FGKO40 is sensitive to diverse agents: 6-thioguanine (5x), MMC (3x), methyl methanesulfonate (MMS) (4x), methylnitrosourea (4x), ethylnitrosourea (3x), chloroethylnitrosourea (3x), UVC (1.5x), hydroxyurea (1.2x), camptothecin (1.2x), and gamma-rays (1.15x). Thus, the FancG protein is important for cellular recovery from diverse genotoxic insults besides crosslinking agents. The level of reactive oxidative species is elevated 1.6-fold in FGKO40 cells, but the spontaneous mutation rate at the hprt locus is lower than normal. The rate of conversion to methotrexate resistance is increased ∼2.5 fold in FGKO40 cells. In an alkaline comet assay, FGKO40 had a normal level of spontaneous DNA breaks as well as breaks produced by an 8-min treatment with MMS. In response to a pulse treatment with MMS, synchronous FGKO40 cells at the end of G1 phase progress normally through S phase but have a slightly lengthened G2 phase. Overall, the phenotype of FGKO40 cells suggests a defect in DNA replication that may result in increased DSBs when damaged DNA is replicated

Spontaneous charge breaking in the NMSSM: dangerous or not?

Energy Technology Data Exchange (ETDEWEB)

Krauss, Manuel E.; Opferkuch, Toby [Bethe Center for Theoretical Physics and Physikalisches Institut der Universitaet Bonn, Bonn (Germany); Staub, Florian [Karlsruhe Institute of Technology, Institute for Theoretical Physics (ITP), Karlsruhe (Germany); Karlsruhe Institute of Technology, Institute for Nuclear Physics (IKP), Eggenstein-Leopoldshafen (Germany)

2017-05-15

We investigate the impact of charge-breaking minima on the vacuum stability of the NMSSM. We concentrate on the case of vanishing A-terms in the sfermion sector, i.e. the only potentially dangerous sources of charge breaking are vacuum expectation values of the charged Higgs fields. We find that, in contrast to Two-Higgs-Doublet Models like the MSSM, at both tree and loop level there exist global charge-breaking minima. Consequently, many regions of parameter space are rendered metastable, which otherwise would have been considered stable if these charge-breaking minima were neglected. However, the inclusion of these new scalar field directions has little impact on otherwise metastable vacuum configurations. (orig.)

Evaluation of ATLAS 100% DVI Line Break Using TRACE Code

International Nuclear Information System (INIS)

Huh, Byung Gil; Bang, Young Seok; Cheong, Ae Ju; Woo, Sweng Woong

2011-01-01

ATLAS (Advanced Thermal-Hydraulic Test Loop for Accident Simulation) is an integral effect test facility in KAERI. It had installed completely to simulate the accident for the OPR1000 and the APR1400 in 2005. After then, several tests for LBLOCA, DVI line break have been performed successfully to resolve the safety issues of the APR1400. Especially, a DVI line break is considered as another spectrum among the SBLOCAs in APR1400 because the DVI line is directly connected to the reactor vessel and the thermal hydraulic behaviors are expected to be different from those for the cold leg injection. However, there are not enough experimental data for the DVI line break. Therefore, integral effect data for the DVI line break of ATLAS is very useful and available for an improvement and validation of safety codes. For the DVI line break in ATLAS, several analyses using MARS and RELAP codes were performed in the ATLAS DSP (Domestic Standard Problem) meetings. However, TRACE code has still not used to simulate a DVI line break. TRACE code has developed as the unified code for the reactor thermal hydraulic analyses in USNRC. In this study, the 100% DVI line break in ATLAS was evaluated by TRACE code. The objectives of this study are to identify the prediction capability of TRACE code for the major thermal hydraulic phenomena of a DVI line break in ATLAS

Parental monitoring and rule-breaking behaviour in secondary school students

Directory of Open Access Journals (Sweden)

Kovačević-Lepojević Marina

2017-01-01

Full Text Available Parental monitoring is recognised as one of the most important family factors that are associated with rule-breaking behaviour. The objective of this paper is to determine the nature of correlations between parental monitoring and its key components (parents’ knowledge, child disclosure, parental solicitation and parental control and rule-breaking behaviour. Additionally, the prediction of the rule-breaking behaviour by parental monitoring variables, age and gender will be considered. The sample included 507 secondary school students from Belgrade, aged 15 to 18. The data on rule-breaking behaviour were collected through ASEBA YSR/11-18, and on parental monitoring via the Parental monitoring scale. The most important conclusions are the following: the strongest negative correlations are found between parental knowledge and child disclosure with rule-breaking behaviour; child disclosure is the most important source of parental knowledge; the variables of parental monitoring, gender and age explained 31.4% of the variance of rule-breaking behaviour; finally, parental control and age, unlike other variables, did not predict rule-breaking behaviour. Given that parents mostly know how children spend their free time only if the children tell this to them, it is recommended that the prevention programme of rule-breaking behaviour should be oriented towards the improvement of parent-child relationships instead of focusing on parental control and supervision. [Project of the Serbian Ministry of Education, Science and Technological Development, Grant no. 179017: Socijalna participacija osoba sa intelektualnom ometenošću

DNA double-strand breaks & poptosis in the testis

NARCIS (Netherlands)

Hamer, Geert

2003-01-01

During spermatogenesis, DNA damage is a naturally occurring event. At a certain stage, during the first meiotic prophase, DNA breaks are endogenously induced and even required for meiotic recombination. We studied these DNA breaks but also used ionizing radiation (IR) to induce DNA double-strand

Ubiquitin-specific protease 5 is required for the efficient repair of DNA double-strand breaks.

Directory of Open Access Journals (Sweden)

Satoshi Nakajima

Full Text Available During the DNA damage response (DDR, ubiquitination plays an important role in the recruitment and regulation of repair proteins. However, little is known about elimination of the ubiquitination signal after repair is completed. Here we show that the ubiquitin-specific protease 5 (USP5, a deubiquitinating enzyme, is involved in the elimination of the ubiquitin signal from damaged sites and is required for efficient DNA double-strand break (DSB repair. Depletion of USP5 sensitizes cells to DNA damaging agents, produces DSBs, causes delayed disappearance of γH2AX foci after Bleocin treatment, and influences DSB repair efficiency in the homologous recombination pathway but not in the non-homologous end joining pathway. USP5 co-localizes to DSBs induced by laser micro-irradiation in a RAD18-dependent manner. Importantly, polyubiquitin chains at sites of DNA damage remained for longer periods in USP5-depleted cells. Our results show that disassembly of polyubiquitin chains by USP5 at sites of damage is important for efficient DSB repair.

No-go for tree-level R-symmetry breaking

Energy Technology Data Exchange (ETDEWEB)

Liu, Feihu [University of Electronic Science and Technology of China, School of Physical Electronics, Chengdu (China); Liu, Muyang [Sichuan University, Center for Theoretical Physics, College of Physical Science and Technology, Chengdu (China); Sun, Zheng [Sichuan University, Center for Theoretical Physics, College of Physical Science and Technology, Chengdu (China); Chinese Academy of Sciences, CAS Key Laboratory of Theoretical Physics, Institute of Theoretical Physics, Beijing (China)

2017-11-15

We show that in gauge mediation models with tree-level R-symmetry breaking where supersymmetry and R-symmetries are broken by different fields, the gaugino mass either vanishes at one loop or finds a contribution from loop-level R-symmetry breaking. Thus tree-level R-symmetry breaking for phenomenology is either no-go or redundant in the simplest type of models. Including explicit messenger mass terms in the superpotential with a particular R-charge arrangement is helpful to bypass the no-go theorem, and the resulting gaugino mass is suppressed by the messenger mass scale. (orig.)

The experimental investigation of supersymmetry breaking

International Nuclear Information System (INIS)

Peskin, M.E.

1996-04-01

If Nature is supersymmetric at the weak interaction scale, what can we hope to learn from experiments on supersymmetric particles? The most mysterious aspect of phenomenological supersymmetry is the mechanism of spontaneous supersymmetry breaking. This mechanism ties the observable pattern of supersymmetric particle masses to aspects of the underlying unified theory at very small distance scales. In this article, I will discuss a systematic experimental program to determine the mechanism of supersymmetry breaking. Both pp and e + e - colliders of the next generation play an essential role

Temporary core liquid level depression during cold-leg small-break LOCA effect of break size and power level

International Nuclear Information System (INIS)

Koizumi, Y.; Kumamaru, H.; Mimura, Y.; Kukita, Y.; Tasaka, K.

1989-01-01

Cold-leg small break LOCA experiments (0.5-10% break) were conducted at the large scale test facility (LSTF), a volumetrically-scaled (1/48) simulator of a PWR, of the ROSA-IV Program. When a break area was less than 2.5% of the scaled cold-leg flow area, the core liquid level was temporarily further depressed to the bottom elevation of the crossover leg during the loop seal clearing early in the transient only by the manometric pressure balance since no coolant remained in the upper portion of the primary system. When the break size was larger than 5%, the core liquid level was temporarily further depressed lower than the bottom elevation of the crossover leg during the loop seal clearing since coolant remained at the upper portion of the primary system; the steam generator (SG) U-tube upflow side and the SG inlet plenum, due to counter current flow limiting by updrafting steam while the coolant drained. The amount of coolant trapped there was dependent on the vapor velocity (core power); the larger the core power, the lower the minimum core liquid level. The RELAP5/MOD2 code reasonable predicted phenomena observed in the experiments. (orig./DG)

Attributing Changing Rates of Temperature Record Breaking to Anthropogenic Influences

Science.gov (United States)

King, Andrew D.

2017-11-01

Record-breaking temperatures attract attention from the media, so understanding how and why the rate of record breaking is changing may be useful in communicating the effects of climate change. A simple methodology designed for estimating the anthropogenic influence on rates of record breaking in a given time series is proposed here. The frequency of hot and cold record-breaking temperature occurrences is shown to be changing due to the anthropogenic influence on the climate. Using ensembles of model simulations with and without human-induced forcings, it is demonstrated that the effect of climate change on global record-breaking temperatures can be detected as far back as the 1930s. On local scales, a climate change signal is detected more recently at most locations. The anthropogenic influence on the increased occurrence of hot record-breaking temperatures is clearer than it is for the decreased occurrence of cold records. The approach proposed here could be applied in rapid attribution studies of record extremes to quantify the influence of climate change on the rate of record breaking in addition to the climate anomaly being studied. This application is demonstrated for the global temperature record of 2016 and the Central England temperature record in 2014.

Modelling and testing the molecular mechanism of radiation-induced chromatid breaks

International Nuclear Information System (INIS)

Bryant, P. E.

2001-01-01

Chromatid breaks induced by ionizing radiation in the G2 phase of the cell cycle are considered as markers of individual human radiosensitivity and may indicate the presence of low-penetrance genes regulating susceptibility to breast and other cancers). Together with our own study of Scottish (Tayside) breast cancer patients and a group of normal controls these studies show an overall 10-fold variation in chromatid break frequency (the parameter defining individual chromosomal 'radiosensitivity'). Thus, an understanding of the mechanisms and genes involved in determining these widely different responses should help to clarify the reasons for individual radiosensitivity and may lead us to identify key genes involved in cancer susceptibility. The presence of colour-switches at around 16% of chromatid break points (detected in harlequin-stained chromosomes) indicates that this type of chromatid break is formed by a chromatin rearrangement involving one or more large chromatin domains of the order of 3 - 5 Mbp, possibly representing transcription 'factories'. The signal model of chromatid breaks assumes that all chromatid breaks are the result of chromatin rearrangements, and that the initiating DNA double-strand break (dsb) is itself not involved in the rearrangement but signals its presence (possibly via ATM protein or DNAPK) leading to the initiation of the chromatin rearrangement. Experimental evidence from radiosensitive cell lines (e.g. human AT and hamster irs2) and with the nucleoside analogue araA (9-β-D-arabinofuranosyladenine) demonstrates the lack of correspondence between the rejoining kinetics of dsb and that of disappearance of chromatid breaks, thus supporting the signal model. Coupled with the linear induction of chromatid breaks with dose in both human and rodent cell lines of various types, and the production of chromatid breaks by single dsb in genetically engineered cell lines the classical 'breakage-first' model of chromatid breaks is no longer

EXECUTIVE SUMMARY OF THE SNOWMASS 2001 WORKING GROUP : ELECTROWEAK SYMMETRY BREAKING

International Nuclear Information System (INIS)

CARENA, M.; GERDES, D.W.; HABER, H.E.; TURCOT, A.S.; ZERWAS, P.M.

2001-01-01

In this summary report of the 2001 Snowmass Electroweak Symmetry Breaking Working Group, the main candidates for theories of electroweak symmetry breaking are surveyed, and the criteria for distinguishing among the different approaches are discussed. The potential for observing electroweak symmetry breaking phenomena at the upgraded Tevatron and the LHC is described. We emphasize the importance of a high-luminosity e + e - linear collider for precision measurements to clarify the underlying electroweak symmetry breaking dynamics. Finally, we note the possible roles of the μ + μ - collider and VLHC for further elucidating the physics of electroweak symmetry breaking

Spontaneous symmetry breaking in N=3 supergravity

International Nuclear Information System (INIS)

Zinov'ev, Yu.M.

1986-01-01

The possibility of the spontaneous symmetry breaking without a cosmological term in N=3 supergravity is investigated. A new, dual version of N=3 supergravity - U(3)-supergravity is constructed. Such a theory is shown to admit a spontaneous supersymmetry breaking without a cosmological term and with three arbitrary scales, including partial super-Higgs effect N=3 → N=2 and N=3 → N=1

Smiles count but minutes matter: responses to classroom exercise breaks.

Science.gov (United States)

Howie, Erin K; Newman-Norlund, Roger D; Pate, Russell R

2014-09-01

To determine the subjective responses of teachers and students to classroom exercise breaks, and how responses varied by duration. This mixed-methods experimental study included focus groups with teachers (N = 8) and 4(th)- and 5(th)-grade students (N = 96). Students participated in 5-, 10-, and 20-minute exercise breaks and 10 minutes of sedentary activity. In an additional exploratory analysis, video-tapes of each condition were coded and compared for positive affect. Students and teachers discussed multiple benefits, but teachers discussed barriers to implementing regular breaks of 5-minutes or more. Students exhibited higher positive affect during each exercise condition. Classroom exercise breaks are an enjoyable way to increase physical activity, but additional support may be needed to encourage teachers to implement breaks of 5 minutes or longer.

Backup pathways of NHEJ in cells of higher eukaryotes: Cell cycle dependence

International Nuclear Information System (INIS)

Iliakis, George

2009-01-01

DNA double-strand breaks (DSBs) induced by ionizing radiation (IR) in cells of higher eukaryotes are predominantly repaired by a pathway of non-homologous end joining (NHEJ) utilizing Ku, DNA-PKcs, DNA ligase IV, XRCC4 and XLF/Cernunnos (D-NHEJ) as central components. Work carried out in our laboratory and elsewhere shows that when this pathway is chemically or genetically compromised, cells do not shunt DSBs to homologous recombination repair (HRR) but instead use another form of NHEJ operating as a backup (B-NHEJ). Here I review our efforts to characterize this repair pathway and discuss its dependence on the cell cycle as well as on the growth conditions. I present evidence that B-NHEJ utilizes ligase III, PARP-1 and histone H1. When B-NHEJ is examined throughout the cell cycle, significantly higher activity is observed in G2 phase that cannot be attributed to HRR. Furthermore, the activity of B-NHEJ is compromised when cells enter the plateau phase of growth. Together, these observations uncover a repair pathway with unexpected biochemical constitution and interesting cell cycle and growth factor regulation. They generate a framework for investigating the mechanistic basis of HRR contribution to DSB repair.

[Breaking bad news in oncology: the Belgian experience].

Science.gov (United States)

Delevallez, F; Lienard, A; Gibon, A-S; Razavi, D

2014-10-01

Breaking bad news is a complex and frequent clinical task for physicians working in oncology. It can have a negative impact on patients and their relatives who are often present during breaking bad news consultations. Many factors influence how the delivery of bad news will be experienced especially the communication skills used by physicians. A three-phase process (post-delivery phase, delivery phase, pre-delivery phase) has been developed to help physician to handle this task more effectively. Communication skills and specific breaking bad news training programs are both necessary and effective. A recent study conducted in Belgium has shown their impact on the time allocated to each of the three phases of this process, on the communication skills used, on the inclusion of the relative in the consultation and on physicians' physiological arousal. These results underscore the importance of promoting intensive communication skills and breaking bad news training programs for health care professionals.

Ancient and novel small RNA pathways compensate for the loss of piRNAs in multiple independent nematode lineages.

Directory of Open Access Journals (Sweden)

Peter Sarkies

2015-02-01

Full Text Available Small RNA pathways act at the front line of defence against transposable elements across the Eukaryota. In animals, Piwi interacting small RNAs (piRNAs are a crucial arm of this defence. However, the evolutionary relationships among piRNAs and other small RNA pathways targeting transposable elements are poorly resolved. To address this question we sequenced small RNAs from multiple, diverse nematode species, producing the first phylum-wide analysis of how small RNA pathways evolve. Surprisingly, despite their prominence in Caenorhabditis elegans and closely related nematodes, piRNAs are absent in all other nematode lineages. We found that there are at least two evolutionarily distinct mechanisms that compensate for the absence of piRNAs, both involving RNA-dependent RNA polymerases (RdRPs. Whilst one pathway is unique to nematodes, the second involves Dicer-dependent RNA-directed DNA methylation, hitherto unknown in animals, and bears striking similarity to transposon-control mechanisms in fungi and plants. Our results highlight the rapid, context-dependent evolution of small RNA pathways and suggest piRNAs in animals may have replaced an ancient eukaryotic RNA-dependent RNA polymerase pathway to control transposable elements.

Physics of chiral symmetry breaking

International Nuclear Information System (INIS)

Shuryak, E.V.

1991-01-01

This subsection of the 'Modeling QCD' Workshop has included five talks. E. Shuryak spoke on 'Recent Progress in Understanding Chiral Symmetry Breaking'; below it is split into two parts: (i) a mini-review of the field and (ii) a brief presentation of the status of the theory of interacting instantons. The next sections correspond to the following talks: (iii) K. Goeke et al., 'Chiral Restoration and Medium Corrections to Nucleon in the NJL Model'; (iv) M. Takizawa and K. Kubodera, 'Study of Meson Properties and Quark Condensates in the NJL Model with Instanton Effects'; (v) G. Klein and A. G. Williams, 'Dynamical Chiral Symmetry Breaking in Dual QCD'; and (vi) R. D. Ball, 'Skyrmions and Baryons.' (orig.)

Electroweak symmetry breaking: Higgs/whatever

International Nuclear Information System (INIS)

Chanowitz, M.S.

1989-01-01

In the first of these two lectures the Higgs mechanism is reviewed in its most general form, which does not necessarily require the existence of Higgs bosons. The general consequences of the hypothesis that electroweak symmetry breaking is due to the Higgs mechanism are deduced just from gauge invariance and unitarity. In the second lecture the general properties are illustrated with three specific models: the Weinberg-Salam model, its minimal supersymmetric extension, and technicolor. The second lecture concludes with a discussion of the experiment signals for strong WW scattering, whose presence or absence will allow us to determine whether the symmetry breaking sector lies above or below 1 TeV. 57 refs

On the soft supersymmetry-breaking parameters in gauge-mediated models

International Nuclear Information System (INIS)

Wagner, C.E.M.

1998-01-01

Gauge mediation of supersymmetry breaking in the observable sector is an attractive idea, which naturally alleviates the flavor changing neutral current problem of supersymmetric theories. Quite generally, however, the number and quantum number of the messengers are not known; nor is their characteristic mass scale determined by the theory. Using the recently proposed method to extract supersymmetry-breaking parameters from wave-function renormalization, we derived general formulae for the soft supersymmetry-breaking parameters in the observable sector, valid in the small and moderate tan β regimes, for the case of split messengers. The full leading-order effects of top Yukawa and gauge couplings on the soft supersymmetry-breaking parameters are included. We give a simple interpretation of the general formulae in terms of the renormalization group evolution of the soft supersymmetry-breaking parameters. As a by-product of this analysis, the one-loop renormalization group evolution of the soft supersymmetry-breaking parameters is obtained for arbitrary boundary conditions of the scalar and gaugino mass parameters at high energies. (orig.)

TALEN-Induced Double-Strand Break Repair of CTG Trinucleotide Repeats

Directory of Open Access Journals (Sweden)

Valentine Mosbach

2018-02-01

Full Text Available Trinucleotide repeat expansions involving CTG/CAG triplets are responsible for several neurodegenerative disorders, including myotonic dystrophy and Huntington’s disease. Because expansions trigger the disease, contracting repeat length could be a possible approach to gene therapy for these disorders. Here, we show that a TALEN-induced double-strand break was very efficient at contracting expanded CTG repeats in yeast. We show that RAD51, POL32, and DNL4 are dispensable for double-strand break repair within CTG repeats, the only required genes being RAD50, SAE2, and RAD52. Resection was totally abolished in the absence of RAD50 on both sides of the break, whereas it was reduced in a sae2Δ mutant on the side of the break containing the longest repeat tract, suggesting that secondary structures at double-strand break ends must be removed by the Mre11-Rad50 complex and Sae2. Following the TALEN double-strand break, single-strand annealing occurred between both sides of the repeat tract, leading to repeat contraction.

[Factors related to intraoperative retinal breaks in macular hole surgery].

Science.gov (United States)

Kumagai, K; Ogino, N; Demizu, S; Atsumi, K; Kurihara, H; Iwaki, M; Ishigooka, H; Tachi, N

2001-02-01

To evaluate the factors of intraoperative retinal breaks in macular hole surgery. This study included 558 eyes of 506 patients who underwent idiopathic macular hole surgery by one surgeon. Multiple regression was performed using the variables of gender, age, affected eye, lens status, stage, duration of symptoms, hole size, axial length, and lattice degeneration. The rate of retinal breaks was higher in stage 3 (16.0%) than in stage 4 (8.2%) (p = 0.014). In eyes with lattice degeneration intraoperative retinal breaks occurred in about 40% of the cases. Major factors were as follows: lattice degeneration (r = 0.24, p lattice degeneration, and gender (r = -0.18, p = 0.035) in eyes of stage 4 without lattice degeneration. The factors of intraoperative retinal breaks in macular hole surgery were lattice degeneration in all eyes and stage 3 in eyes without lattice degeneration. The high incidence of intraoperative retinal breaks in stage 3 was mainly due to the occurrence of posterior vitreous detachment. Male gender was a significant factor associated with intraoperative retinal breaks.

Break-up stage restoration in multifragmentation reactions

Energy Technology Data Exchange (ETDEWEB)

Raduta, Ad.R. [Institut de Physique Nucleaire, IN2P3-CNRS, F-91406 Orsay cedex (France)]|[NIPNE, Bucharest-Magurele, POB-MG 6 (Romania); Bonnet, E.; Borderie, B.; Le Neindre, N.; Rivet, M.F. [Institut de Physique Nucleaire, IN2P3-CNRS, F-91406 Orsay cedex (France); Piantelli, S. [Dip. di Fisica e Sezione INFN, Universita di Firenze, I-50019 Sesto Fiorentino, Fi (Italy)

2007-02-15

In the case of Xe+Sn at 32 MeV/nucleon multifragmentation reaction break-up fragments are built-up from the experimentally detected ones using evaluations of light particle evaporation multiplicities which thus settle fragment internal excitation. Freeze-out characteristics are extracted from experimental kinetic energy spectra under the assumption of full decoupling between fragment formation and energy dissipated in different degrees of freedom. Thermal kinetic energy is determined uniquely while for freeze-out volume - collective energy a multiple solution is obtained. Coherence between the solutions of the break-up restoration algorithm and the predictions of a multifragmentation model with identical definition of primary fragments is regarded as a way to select the true value. The broad kinetic energy spectrum of {sup 3}He is consistent with break-up genesis of this isotope. (authors)

Break-up stage restoration in multifragmentation reactions

International Nuclear Information System (INIS)

Raduta, Ad.R.; Bonnet, E.; Borderie, B.; Le Neindre, N.; Rivet, M.F.; Piantelli, S.

2007-02-01

In the case of Xe+Sn at 32 MeV/nucleon multifragmentation reaction break-up fragments are built-up from the experimentally detected ones using evaluations of light particle evaporation multiplicities which thus settle fragment internal excitation. Freeze-out characteristics are extracted from experimental kinetic energy spectra under the assumption of full decoupling between fragment formation and energy dissipated in different degrees of freedom. Thermal kinetic energy is determined uniquely while for freeze-out volume - collective energy a multiple solution is obtained. Coherence between the solutions of the break-up restoration algorithm and the predictions of a multifragmentation model with identical definition of primary fragments is regarded as a way to select the true value. The broad kinetic energy spectrum of 3 He is consistent with break-up genesis of this isotope. (authors)

Towards a Decision Making Model for City Break Travel

OpenAIRE

Dunne, Gerard; Flanagan, Sheila; Buckley, Joan

2011-01-01

Purpose The purpose of this paper is to examine the city break travel decision and in particular to develop a decision making model that reflects the characteristics of this type of trip taking. Method The research follows a sequential mixed methods approach consisting of two phases. Phase One involves a quantitative survey of 1,000 visitors to Dublin, from which city break and non city break visitor cohorts are separated and compared. Phase Two entails a qualitative analysis (involvin...

Mouse embryonic stem cells, but not somatic cells, predominantly use homologous recombination to repair double-strand DNA breaks.

Science.gov (United States)

Tichy, Elisia D; Pillai, Resmi; Deng, Li; Liang, Li; Tischfield, Jay; Schwemberger, Sandy J; Babcock, George F; Stambrook, Peter J

2010-11-01

Embryonic stem (ES) cells give rise to all cell types of an organism. Since mutations at this embryonic stage would affect all cells and be detrimental to the overall health of an organism, robust mechanisms must exist to ensure that genomic integrity is maintained. To test this proposition, we compared the capacity of murine ES cells to repair DNA double-strand breaks with that of differentiated cells. Of the 2 major pathways that repair double-strand breaks, error-prone nonhomologous end joining (NHEJ) predominated in mouse embryonic fibroblasts, whereas the high fidelity homologous recombinational repair (HRR) predominated in ES cells. Microhomology-mediated end joining, an emerging repair pathway, persisted at low levels in all cell types examined. The levels of proteins involved in HRR and microhomology-mediated end joining were highly elevated in ES cells compared with mouse embryonic fibroblasts, whereas those for NHEJ were quite variable, with DNA Ligase IV expression low in ES cells. The half-life of DNA Ligase IV protein was also low in ES cells. Attempts to increase the abundance of DNA Ligase IV protein by overexpression or inhibition of its degradation, and thereby elevate NHEJ in ES cells, were unsuccessful. When ES cells were induced to differentiate, however, the level of DNA Ligase IV protein increased, as did the capacity to repair by NHEJ. The data suggest that preferential use of HRR rather than NHEJ may lend ES cells an additional layer of genomic protection and that the limited levels of DNA Ligase IV may account for the low level of NHEJ activity.

Supersymmetry breaking at finite temperature

International Nuclear Information System (INIS)

Kratzert, K.

2002-11-01

The mechanism of supersymmetry breaking at finite temperature is still only partly understood. Though it has been proven that temperature always breaks supersymmetry, the spontaneous nature of this breaking remains unclear, in particular the role of the Goldstone fermion. The aim of this work is to unify two existing approaches to the subject. From a hydrodynamic point of view, it has been argued under very general assumptions that in any supersymmetric quantum field theory at finite temperature there should exist a massless fermionic collective excitation, named phonino because of the analogy to the phonon. In the framework of a self-consistent resummed perturbation theory, it is shown for the example of the Wess-Zumino model that this mode fits very well into the quantum field theoretical framework pursued by earlier works. Interpreted as a bound state of boson and fermion, it contributes to the supersymmetric Ward-Takahashi identities in a way showing that supersymmetry is indeed broken spontaneously with the phonino playing the role of the Goldstone fermion. The second part of the work addresses the case of supersymmetric quantum electrodynamics. It is shown that also here the phonino exists and must be interpreted as the Goldstone mode. This knowledge allows a generalization to a wider class of models. (orig.)

Breaking News as Radicalisation

DEFF Research Database (Denmark)

Hartley, Jannie Møller

The aim of the paper is to make explicit how the different categories are applied in the online newsroom and thus how new categories can be seen as positioning strategies in the form of radicalisations of already existing categories. Thus field theory provides us with tools to analyse how online...... journalists are using the categorisations to create hierarchies within the journalistic field in order to position themselves as specialists in what Tuchman has called developing news, aiming and striving for what today is know as breaking news and the “exclusive scoop,” as the trademark of online journalism...... in a media environment where immediacy rules (Domingo 2008a). Following this research the primary focus of this paper is the category breaking news and Tuchmans developing news, but as they are all connected the analysis will also draw upon the other categories in Tuchmans typology. The theoretical framework...

Dam Break Analysis of Embankment Dams Considering Breach Characteristics

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Abolfazl Shamsaei

2004-05-01

Full Text Available The study of dam's break, needs the definition of various parameters such as the break cause, its type, its dimension and the duration of breach development. The precise forecast for different aspects of the breach is one of the most important factors for analyzing it in embankment dam. The characteristics of the breach and determination of their vulnerability has the most effect on the waves resulting from dam break. Investigating, about the parameters of the breach in "Silveh" earth dam have been determined using the suitable model. In Silve dam a trapezoid breach with side slope z=0.01m and the average base line b=80m was computed. The duration of the breaches development is 1.9 hour. Regarding the above results and the application of DAM Break software the consequences of the probable break of the dam was determined. The analysis of the results of water covering of the city of Piranshahr located 12km from silve dam confirms that in 3 hours the water will reach the height (level of 1425 meters.

RNF4-mediated polyubiquitination regulates the Fanconi anemia/BRCA pathway.

Science.gov (United States)

Xie, Jenny; Kim, Hyungjin; Moreau, Lisa A; Puhalla, Shannon; Garber, Judy; Al Abo, Muthana; Takeda, Shunichi; D'Andrea, Alan D

2015-04-01

The Fanconi anemia/BRCA (FA/BRCA) pathway is a DNA repair pathway that is required for excision of DNA interstrand cross-links. The 17 known FA proteins, along with several FA-associated proteins (FAAPs), cooperate in this pathway to detect, unhook, and excise DNA cross-links and to subsequently repair the double-strand breaks generated in the process. In the current study, we identified a patient with FA with a point mutation in FANCA, which encodes a mutant FANCA protein (FANCAI939S). FANCAI939S failed to bind to the FAAP20 subunit of the FA core complex, leading to decreased stability. Loss of FAAP20 binding exposed a SUMOylation site on FANCA at amino acid residue K921, resulting in E2 SUMO-conjugating enzyme UBC9-mediated SUMOylation, RING finger protein 4-mediated (RNF4-mediated) polyubiquitination, and proteasome-mediated degradation of FANCA. Mutation of the SUMOylation site of FANCA rescued the expression of the mutant protein. Wild-type FANCA was also subject to SUMOylation, RNF4-mediated polyubiquitination, and degradation, suggesting that regulated release of FAAP20 from FANCA is a critical step in the normal FA pathway. Consistent with this model, cells lacking RNF4 exhibited interstrand cross-linker hypersensitivity, and the gene encoding RNF4 was epistatic with the other genes encoding members of the FA/BRCA pathway. Together, the results from our study underscore the importance of analyzing unique patient-derived mutations for dissecting complex DNA repair processes.

Interactions between Melanin Enzymes and Their Atypical Recruitment to the Secretory Pathway by Palmitoylation

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Srijana Upadhyay

2016-11-01

Full Text Available Melanins are biopolymers that confer coloration and protection to the host organism against biotic or abiotic insults. The level of protection offered by melanin depends on its biosynthesis and its subcellular localization. Previously, we discovered that Aspergillus fumigatus compartmentalizes melanization in endosomes by recruiting all melanin enzymes to the secretory pathway. Surprisingly, although two laccases involved in the late steps of melanization are conventional secretory proteins, the four enzymes involved in the early steps of melanization lack a signal peptide or a transmembrane domain and are thus considered “atypical” secretory proteins. In this work, we found interactions among melanin enzymes and all melanin enzymes formed protein complexes. Surprisingly, the formation of protein complexes by melanin enzymes was not critical for their trafficking to the endosomal system. By palmitoylation profiling and biochemical analyses, we discovered that all four early melanin enzymes were strongly palmitoylated during conidiation. However, only the polyketide synthase (PKS Alb1 was strongly palmitoylated during both vegetative hyphal growth and conidiation when constitutively expressed alone. This posttranslational lipid modification correlates the endosomal localization of all early melanin enzymes. Intriguingly, bioinformatic analyses predict that palmitoylation is a common mechanism for potential membrane association of polyketide synthases (PKSs and nonribosomal peptide synthetases (NRPSs in A. fumigatus. Our findings indicate that protein-protein interactions facilitate melanization by metabolic channeling, while posttranslational lipid modifications help recruit the atypical enzymes to the secretory pathway, which is critical for compartmentalization of secondary metabolism.

Comparing the role of fuel breaks across southern California national forests

Science.gov (United States)

Syphard, Alexandra D.; Keeley, Jon E.; Brennan, Teresa J.

2011-01-01

Fuel treatment of wildland vegetation is the primary approach advocated for mitigating fire risk at the wildland-urban interface (WUI), but little systematic research has been conducted to understand what role fuel treatments play in controlling large fires, which factors influence this role, or how the role of fuel treatments may vary over space and time. We assembled a spatial database of fuel breaks and fires from the last 30 years in four southern California national forests to better understand which factors are consistently important for fuel breaks in the control of large fires. We also explored which landscape features influence where fires and fuel breaks are most likely to intersect. The relative importance of significant factors explaining fuel break outcome and number of fire and fuel break intersections varied among the forests, which reflects high levels of regional landscape diversity. Nevertheless, several factors were consistently important across all the forests. In general, fuel breaks played an important role in controlling large fires only when they facilitated fire management, primarily by providing access for firefighting activities. Fire weather and fuel break maintenance were also consistently important. Models and maps predicting where fuel breaks and fires are most likely to intersect performed well in the regions where the models were developed, but these models did not extend well to other regions, reflecting how the environmental controls of fire regimes vary even within a single ecoregion. Nevertheless, similar mapping methods could be adopted in different landscapes to help with strategic location of fuel breaks. Strategic location of fuel breaks should also account for access points near communities, where fire protection is most important.

A surprise case of colonic interposition

International Nuclear Information System (INIS)

Law, Robert

2006-01-01

Blind nasogastric intubation failure as a result of changes to the normal anatomical pathway is not uncommon. This case report is of fluoroscopically guided intubation in a patient in whom blind intubation failed as a result of what was subsequently found to be a colonic interposition with associated late complications. Fluroscopically guided nasogastric intubation is a safe and effective procedure that should always be considered when blind intubation has failed

Induced and natural break sites in the chromosomes of Hawaiian Drosophila

International Nuclear Information System (INIS)

Tonzetich, J.; Lyttle, T.W.; Carson, H.L.

1988-01-01

Gamma-irradiation of a laboratory strain of the Hawaiian species of Drosophila heteroneura yielded 310 breaks in the five major acrocentric polytene chromosomes. Their map positions conform to the Poisson distribution, unlike most of the 436 natural breaks mapped in 105 closely related species endemic to Hawaii. Genome element E is longer and has more induced breaks than the others. Both in Hawaiian and related species groups, this element shows increased polymorphism and fixation of naturally occurring inversions. The X chromosome (element A) also accumulates many natural breaks; the majority of the resulting aberrations become fixed rather than remain as polymorphisms. Although size may play a small role in initial break distribution, the major effects relative to the establishment of a rearrangement in natural populations are ascribed to the interaction of selection and drift. Nonconformance of the natural breaks to the Poisson distribution appears to be due to the tendency for breaks to accumulate both in the proximal euchromatic portion of each arm and in heterochromatic regions that are not replicated in the polytene chromosomes

X-rays from comets - a surprising discovery

CERN Document Server

CERN. Geneva

2000-01-01

Comets are kilometre-size aggregates of ice and dust, which remained from the formation of the solar system. It was not obvious to expect X-ray emission from such objects. Nevertheless, when comet Hyakutake (C/1996 B2) was observed with the ROSAT X-ray satellite during its close approach to Earth in March 1996, bright X-ray emission from this comet was discovered. This finding triggered a search in archival ROSAT data for comets, which might have accidentally crossed the field of view during observations of unrelated targets. To increase the surprise even more, X-ray emission was detected from four additional comets, which were optically 300 to 30 000 times fainter than Hyakutake. For one of them, comet Arai (C/1991 A2), X-ray emission was even found in data which were taken six weeks before the comet was optically discovered. These findings showed that comets represent a new class of celestial X-ray sources. The subsequent detection of X-ray emission from several other comets in dedicated observations confir...

Small extra dimensions from the interplay of gauge and supersymmetry breaking

International Nuclear Information System (INIS)

Buchmueller, W.; Catena, R.; Schmidt-Hoberg, K.

2008-03-01

Higher-dimensional theories provide a promising framework for unified extensions of the supersymmetric standard model. Compactifications to four dimensions often lead to U(1) symmetries beyond the standard model gauge group, whose breaking scale is classically undetermined. Without supersymmetry breaking, this is also the case for the size of the compact dimensions. Fayet-Iliopoulos terms generically fix the scale M of gauge symmetry breaking. The interplay with supersymmetry breaking can then stabilize the compact dimensions at a size 1/M, much smaller than the inverse supersymmetry breaking scale 1/μ. We illustrate this mechanism with an SO(10) model in six dimensions, compactified on an orbifold. (orig.)

A Verification Study on the Loop-Breaking Logic of FTREX

International Nuclear Information System (INIS)

Choi, Jong Soo

2008-01-01

The logical loop problem in fault tree analysis (FTA) has been solved by manually or automatically breaking their circular logics. The breaking of logical loops is one of uncertainty sources in fault tree analyses. A practical method which can verify fault tree analysis results was developed by Choi. The method has the capability to handle logical loop problems. It has been implemented in a FORTRAN program which is called VETA (Verification and Evaluation of fault Tree Analysis results) code. FTREX, a well-known fault tree quantifier developed by KAERI, has an automatic loop-breaking logic. In order to make certain of the correctness of the loop-breaking logic of FTREX, some typical trees with complex loops are developed and applied to this study. This paper presents some verification results of the loop-breaking logic tested by the VETA code

DNA damage response pathway in radioadaptive response.

Science.gov (United States)

Sasaki, Masao S; Ejima, Yosuke; Tachibana, Akira; Yamada, Toshiko; Ishizaki, Kanji; Shimizu, Takashi; Nomura, Taisei

2002-07-25

Radioadaptive response is a biological defense mechanism in which low-dose ionizing irradiation elicits cellular resistance to the genotoxic effects of subsequent irradiation. However, its molecular mechanism remains largely unknown. We previously demonstrated that the dose recognition and adaptive response could be mediated by a feedback signaling pathway involving protein kinase C (PKC), p38 mitogen activated protein kinase (p38MAPK) and phospholipase C (PLC). Further, to elucidate the downstream effector pathway, we studied the X-ray-induced adaptive response in cultured mouse and human cells with different genetic background relevant to the DNA damage response pathway, such as deficiencies in TP53, DNA-PKcs, ATM and FANCA genes. The results showed that p53 protein played a key role in the adaptive response while DNA-PKcs, ATM and FANCA were not responsible. Wortmannin, a specific inhibitor of phosphatidylinositol 3-kinase (PI3K), mimicked the priming irradiation in that the inhibitor alone rendered the cells resistant against the induction of chromosome aberrations and apoptosis by the subsequent X-ray irradiation. The adaptive response, whether it was afforded by low-dose X-rays or wortmannin, occurred in parallel with the reduction of apoptotic cell death by challenging doses. The inhibitor of p38MAPK which blocks the adaptive response did not suppress apoptosis. These observations indicate that the adaptive response and apoptotic cell death constitute a complementary defense system via life-or-death decisions. The p53 has a pivotal role in channeling the radiation-induced DNA double-strand breaks (DSBs) into an adaptive legitimate repair pathway, where the signals are integrated into p53 by a circuitous PKC-p38MAPK-PLC damage sensing pathway, and hence turning off the signals to an alternative pathway to illegitimate repair and apoptosis. A possible molecular mechanism of adaptive response to low-dose ionizing irradiation has been discussed in relation to

Salam-Weinberg symmetry breaking with superheavy Higgs particles

International Nuclear Information System (INIS)

Misra, S.P.

1986-09-01

We discuss here the possibility of the breaking of the Salam-Weinberg symmetry by Higgs particles which are superheavy. The symmetry-breaking is associated with a nonzero vacuum expectation value of fermion condensates. This mechanism, if operative in nature, will imply the absence of Higgs particles at the weak scale. (author)

Breaking sod or breaking even? Flax on the northern Great Plains and Prairies, 1889-1930.

Science.gov (United States)

MacFayden, Joshua D

2009-01-01

A new thirst for paint and color in cities made extensive flax production profitable in the northern Great Plains and Prairies and contributed to the cultivation of the most fragile grassland ecosystems. The production of flax seed for linseed oil became an early spin-off of the Prairie wheat economy but, unlike wheat, flax vanished from old land after one or two rotations and reappeared in districts with the most new breaking. Officials explained the migrant crop as preparing native grasslands for cultivation or exhausting soil in old land, but farmers brought flax to their new breaking for other reasons. Producers would only put flax on any land when a range of economic and environmental conditions were in place. It was never sown without promise of adequately high prices or in the absence of affordable seed and other inputs. When price allowed, it usually appeared on new breaking because it could be planted later and transported further without upsetting the balance of other activities and without farmers learning many new techniques. Scientists discovered that diseased soil drove flax off old land, not soil exhaustion. Circumventing the disease was possible but costly, and farmers simply replaced flax with the next most lucrative commodity.

Phenomenology of GUT-less Supersymmetry Breaking

CERN Document Server

Ellis, Jonathan Richard; Sandick, Pearl

2007-01-01

We study models in which supersymmetry breaking appears at an intermediate scale, M_{in}, below the GUT scale. We assume that the soft supersymmetry-breaking parameters of the MSSM are universal at M_{in}, and analyze the morphology of the constraints from cosmology and collider experiments on the allowed regions of parameter space as M_{in} is reduced from the GUT scale. We present separate analyses of the (m_{1/2},m_0) planes for tan(beta)=10 and tan(beta)=50, as well as a discussion of non-zero trilinear couplings, A_0. Specific scenarios where the gaugino and scalar masses appear to be universal below the GUT scale have been found in mirage-mediation models, which we also address here. We demand that the lightest neutralino be the LSP, and that the relic neutralino density not conflict with measurements by WMAP and other observations. At moderate values of M_{in}, we find that the allowed regions of the (m_{1/2},m_0) plane are squeezed by the requirements of electroweak symmetry breaking and that the ligh...

Dormancy Breaking in Ormosia arborea Seeds

Directory of Open Access Journals (Sweden)

Edilma Pereira Gonçalves

2011-01-01

Full Text Available Ormosia arborea is a tree species planted in urban areas and used to restore degraded areas. Its seeds are dormant and propagation is difficult. This study compares different dormancy breaking methods and physiological seed quality and seedling production. The seeds were germinated in sand in the laboratory of the Universidade Estadual de Santa Cruz, Ilhéus, Bahia, Brazil. The following dormancy breaking treatments were applied: control (intact seeds, 100°C water immersion; boiling water immersion followed by 24 hours of soaking; scarification with number 100 and number 50 sandpaper opposite from root emergence; sulfuric acid immersion for 1 hour, 50, 45, and 30 minutes. Seed immersion in 100°C and boiling water did not break the dormancy. The study species showed a greater vigor of seedling when its seeds were submitted to treatments associated with tegument rupturing by sandpaper or sulfuric acid. On the other hand, seed scarification with sulfuric acid for 1 hour, 50, 45, and 30 minutes or sandpaper favored seed germination and vigor.

Atmospheric noise of a breaking tidal bore.

Science.gov (United States)

Chanson, Hubert

2016-01-01

A tidal bore is a surge of waters propagating upstream in an estuary as the tidal flow turns to rising and the flood tide propagates into a funnel-shaped system. Large tidal bores have a marked breaking roller. The sounds generated by breaking tidal bores were herein investigated in the field (Qiantang River) and in laboratory. The sound pressure record showed two dominant periods, with some similarity with an earlier study [Chanson (2009). J. Acoust. Soc. Am. 125(6), 3561-3568]. The two distinct phases were the incoming tidal bore when the sound amplitude increased with the approaching bore, and the passage of the tidal bore in front of the microphone when loud and powerful noises were heard. The dominant frequency ranged from 57 to 131 Hz in the Qiantang River bore. A comparison between laboratory and prototype tidal bores illustrated both common features and differences. The low pitch sound of the breaking bore had a dominant frequency close to the collective oscillations of bubble clouds, which could be modeled with a bubble cloud model using a transverse dimension of the bore roller. The findings suggest that this model might be over simplistic in the case of a powerful breaking bore, like that of the Qiantang River.

Breaking Waves on the Ocean Surface

Science.gov (United States)

Schwendeman, Michael S.

In the open ocean, breaking waves are a critical mechanism for the transfer of energy, momentum, and mass between the atmosphere and the ocean. Despite much study, fundamental questions about wave breaking, such as what determines whether a wave will break, remain unresolved. Measurements of oceanic breakers, or "whitecaps," are often used to validate the hypotheses derived in simplified theoretical, numerical, or experimental studies. Real-world measurements are also used to improve the parameterizations of wave-breaking in large global models, such as those forecasting climate change. Here, measurements of whitecaps are presented using ship-based cameras, from two experiments in the North Pacific Ocean. First, a method for georectifying the camera imagery is described using the distant horizon, without additional instrumentation. Over the course of the experiment, this algorithm correctly identifies the horizon in 92% of images in which it is visible. In such cases, the calculation of camera pitch and roll is accurate to within 1 degree. The main sources of error in the final georectification are from mislabeled horizons due to clouds, rain, or poor lighting, and from vertical "heave" motions of the camera, which cannot be calculated with the horizon method. This method is used for correcting the imagery from the first experiment, and synchronizing the imagery from the second experiment to an onboard inertial motion package. Next, measurements of the whitecap coverage, W, are shown from both experiments. Although W is often used in models to represent whitecapping, large uncertainty remains in the existing parameterizations. The data show good agreement with recent measurements using the wind speed. Although wave steepness and dissipation are hypothesized to be more robust predictors of W, this is shown to not always be the case. Wave steepness shows comparable success to the wind parameterizations only when using a mean-square slope variable calculated over the

Small break critical discharge: The roles of vapor and liquid entrainment in a stratified two-phase region upstream of the break

International Nuclear Information System (INIS)

Schrock, V.E.; Revankar, S.T.; Mannheimer, R.; Wang, C.H.

1986-12-01

The main objective of this research program was to perform an experimental investigation on the phenomena of two-phase critical flow through small break from a horizontal pipe which contained a stratified two phase flow. Stagnation conditions investigated were saturated steam-water, and air-cold water at pressures ranging from 0.37 MPa to 1.07 MPa. The small breaks employed were cylindrical tubes of diameters 3.96 mm, 6.32 mm, and 10.1 mm with sharp-edged entrance. For breaks resulting from a small hole in a primary coolant pipe or in a small pipe, a sharp-edged orifice or a sharp-edged tube can be the approximation

Repair of double-strand breaks in Micrococcus radiodurans

International Nuclear Information System (INIS)

Burrell, A.D.; Dean, C.J.

1975-01-01

Micrococcus radiodurans has been shown to sustain double-strand breaks in its DNA after exposure to x-radiation. Following sublethal doses of x-rays (200 krad in oxygen or less), the cells were able to repair these breaks, and an intermediate fast-sedimenting DNA component seemed to be involved in the repair process

Proton continuum spectra from deuteron break-up at 56 MeV

Energy Technology Data Exchange (ETDEWEB)

Matsuoka, N.; Kondo, M.; Shimizu, A.; Saito, T.; Nagamachi, S. [Osaka Univ., Suita (Japan). Research Center for Nuclear Physics; Sakaguchi, H.; Ohtani, F.; Goto, A.; Ikegami, H.; Muraoka, M [eds.

1980-01-01

Proton continuum spectra from deuteron break-up have been measured for 14 elements at 56 MeV. Each spectrum shows a prominent bump at forward angles. Projectile break-up calculations reproduce well the spectral shapes and the angular dependence of the bump spectra. The break-up cross section is nearly proportional to (A sup(1/3) + 0.8)/sup 2/. The total break-up cross section amounts to 24 - 35% of the deuteron total reaction cross section.

Assessing quality and completeness of human transcriptional regulatory pathways on a genome-wide scale

Directory of Open Access Journals (Sweden)

Aifantis Iannis

2011-02-01

Full Text Available Abstract Background Pathway databases are becoming increasingly important and almost omnipresent in most types of biological and translational research. However, little is known about the quality and completeness of pathways stored in these databases. The present study conducts a comprehensive assessment of transcriptional regulatory pathways in humans for seven well-studied transcription factors: MYC, NOTCH1, BCL6, TP53, AR, STAT1, and RELA. The employed benchmarking methodology first involves integrating genome-wide binding with functional gene expression data to derive direct targets of transcription factors. Then the lists of experimentally obtained direct targets are compared with relevant lists of transcriptional targets from 10 commonly used pathway databases. Results The results of this study show that for the majority of pathway databases, the overlap between experimentally obtained target genes and targets reported in transcriptional regulatory pathway databases is surprisingly small and often is not statistically significant. The only exception is MetaCore pathway database which yields statistically significant intersection with experimental results in 84% cases. Additionally, we suggest that the lists of experimentally derived direct targets obtained in this study can be used to reveal new biological insight in transcriptional regulation and suggest novel putative therapeutic targets in cancer. Conclusions Our study opens a debate on validity of using many popular pathway databases to obtain transcriptional regulatory targets. We conclude that the choice of pathway databases should be informed by solid scientific evidence and rigorous empirical evaluation. Reviewers This article was reviewed by Prof. Wing Hung Wong, Dr. Thiago Motta Venancio (nominated by Dr. L Aravind, and Prof. Geoff J McLachlan.

Breaking away.

Science.gov (United States)

Innes, G M; Sosnow, P L

1995-05-01

While life as hospital employees was comfortable, the lure of independence won out for these two emergency department physicians. Breaking away to develop a new company was not easy, but it's paid off for the entrepreneurs of the Capital Region Emergency Medicine, P.C. Developing an emergency medicine business meant learning all aspects of business: billing services, evaluating legal services, raising capital, and becoming employers. The advantage has been an ability to use profits to improve the moral of staff, an increase in salary, and an overall sense of satisfaction.

Unified models of the QCD axion and supersymmetry breaking

Directory of Open Access Journals (Sweden)

Keisuke Harigaya

2017-08-01

Full Text Available Similarities between the gauge meditation of supersymmetry breaking and the QCD axion model suggest that they originate from the same dynamics. We present a class of models where supersymmetry and the Peccei–Quinn symmetry are simultaneously broken. The messengers that mediate the effects of these symmetry breakings to the Standard Model are identical. Since the axion resides in the supersymmetry breaking sector, the saxion and the axino are heavy. We show constraints on the axion decay constant and the gravitino mass.

Supersymmetry breaking by gaugino condensation

International Nuclear Information System (INIS)

Casas, J.A.

1991-01-01

We briefly review the status and some of the recent work on supersymmetry breaking by gaugino condensation effects in the context of superstring theories. This issue is intimately related to the structure of the effective potential coming from superstrings. Minimization of this not only allows to find the scale of supersymmetry breaking, but also to determine dynamically other fundamental parameters of the theory, in particular the gauge coupling constant at the unification point and the expectation values of the moduli which give the size and shape of the compactified space. In a multiple condensate scenario these get reasonable values which may, in turn, lead to a determination of the family mass hierarchy. Some directions for future work are examined too. (author). 23 refs

Breaking Carbon Lock-in

DEFF Research Database (Denmark)

Driscoll, Patrick Arthur

2014-01-01

This central focus of this paper is to highlight the ways in which path dependencies and increasing returns (network effects) serve to reinforce carbon lock-in in large-scale road transportation infrastructure projects. Breaking carbon lock-in requires drastic changes in the way we plan future...

Risk factors for retinal breaks in patients with symptom of floaters.

Science.gov (United States)

Singalavanija, Apichart; Amornrattanapan, Chutiwan; Nitiruangjarus, Kanjanee; Tongsai, Sasima

2010-06-01

To identify the risk factors of retinal breaks in patients with the symptom of floaters, and to determine the association between those risk factors and retinal breaks. A retrospective analytic study of 184 patients (55 males and 129 females) that included 220 eyes was conducted. Patient information such as age, symptoms (multiple floaters, flashing), duration of symptom, refractive error, history of cataract surgery, family history of retinal detachment, and complete eye examination were recorded. The patients were divided into two groups, the first group (control group) had symptoms of floaters and no retinal breaks, the second group (retinal breaks group) had symptoms of floaters with retinal breaks. Chi-square test, and the multiple logistic regression were used for statistical analysis. Two hundred twenty eyes, 175 eyes of the control group and 45 eyes of the retinal breaks group were examined and included in this study. The multiple logistic regression analysis revealed that patients with multiple floaters, and floaters and flashing increased the risk of retinal breaks to 5.8 and 4.3 times, respectively, when compared to patients with single floater or floaters alone. Lattice degeneration increased the risk of retinal breaks to 5.9 times when compared to eyes that did not have lattice degeneration. Multiple floaters, flashing and lattice degeneration are risk factors of retinal breaks in patients with symptoms of floaters. Therefore, it is important for the ophthalmologists to be aware of these risk factors and the patients at risk should have follow-up examinations.

On the Soft Supersymmetry Breaking Parameters in Gauge-Mediated Models

CERN Document Server

Wagner, C E M

1998-01-01

Gauge mediation of supersymmetry breaking in the observable sector is an attractive idea, which naturally alleviates the flavour changing neutral current problem of supersymmetric theories. Quite generally, however, the number and quantum number of the messengers are not known; nor is their characteristic mass scale determined by the theory. Using the recently proposed method to extract supersymmetry-breaking parameters from wave-function renormalization, we derived general formulae for the soft supersymmetry-breaking parameters in the observable sector, valid in the small and moderate $\\tan\\beta$ regimes, for the case of split messengers. The full leading-order effects of top Yukawa and gauge couplings on the soft supersymmetry-breaking parameters are included. We give a simple interpretation of the general formulae in terms of the renormalization group evolution of the soft supersymmetry-breaking parameters. As a by-product of this analysis, the one-loop renormalization group evolution of the soft supersymm...

Pipe break prediction based on evolutionary data-driven methods with brief recorded data

International Nuclear Information System (INIS)

Xu Qiang; Chen Qiuwen; Li Weifeng; Ma Jinfeng

2011-01-01

Pipe breaks often occur in water distribution networks, imposing great pressure on utility managers to secure stable water supply. However, pipe breaks are hard to detect by the conventional method. It is therefore necessary to develop reliable and robust pipe break models to assess the pipe's probability to fail and then to optimize the pipe break detection scheme. In the absence of deterministic physical models for pipe break, data-driven techniques provide a promising approach to investigate the principles underlying pipe break. In this paper, two data-driven techniques, namely Genetic Programming (GP) and Evolutionary Polynomial Regression (EPR) are applied to develop pipe break models for the water distribution system of Beijing City. The comparison with the recorded pipe break data from 1987 to 2005 showed that the models have great capability to obtain reliable predictions. The models can be used to prioritize pipes for break inspection and then improve detection efficiency.

ErbB2 regulates NHEJ repair pathway by affecting erbB1-triggered IR-induced Akt activity

International Nuclear Information System (INIS)

Toulany, Mahmoud; Peter Rodemann, H.

2009-01-01

We have already reported that erbBl-PI3K-AKT signaling is an important pathway in regulating radiation sensitivity and DNA double strand break repair of human tumor cells. In the present study using small interfering RNA and pharmacological inhibitors in non-small cell lung cancer cell lines we investigated the role of Aktl on radiation-induced DNA-PKcs activity and DNA-double strand break (DNA-DSB) repair. Likewise, the function of erbB2 as hetrodimerization partner of erbBl in radiation-induced Akt activity and regulation of DNA-dsb repair through DNA-PKcs was evaluated. In A549 and H460 transfected with AKTl-siRNA radiation-induced phosphorylation of DNA-PKcs the key enzyme regulating NHEJ repair pathway was markedly inhibited. In both cell lines downregulation of Aktl led to a significant enhancement of residual DNA-DSB, i.e. impaired DNA-DSB repair. Interestingly, in cells transfected with DNA-PKcs-siRNA a lack of effect of AKTl-siRNA on enhancement of residual DNA-DSBs was observed. This results indicate that Aktl regulates NHEJ repair in a DNA-PKcs dependent manner

Human Amygdala Tracks a Feature-Based Valence Signal Embedded within the Facial Expression of Surprise.

Science.gov (United States)

Kim, M Justin; Mattek, Alison M; Bennett, Randi H; Solomon, Kimberly M; Shin, Jin; Whalen, Paul J

2017-09-27

Human amygdala function has been traditionally associated with processing the affective valence (negative vs positive) of an emotionally charged event, especially those that signal fear or threat. However, this account of human amygdala function can be explained by alternative views, which posit that the amygdala might be tuned to either (1) general emotional arousal (activation vs deactivation) or (2) specific emotion categories (fear vs happy). Delineating the pure effects of valence independent of arousal or emotion category is a challenging task, given that these variables naturally covary under many circumstances. To circumvent this issue and test the sensitivity of the human amygdala to valence values specifically, we measured the dimension of valence within the single facial expression category of surprise. Given the inherent valence ambiguity of this category, we show that surprised expression exemplars are attributed valence and arousal values that are uniquely and naturally uncorrelated. We then present fMRI data from both sexes, showing that the amygdala tracks these consensus valence values. Finally, we provide evidence that these valence values are linked to specific visual features of the mouth region, isolating the signal by which the amygdala detects this valence information. SIGNIFICANCE STATEMENT There is an open question as to whether human amygdala function tracks the valence value of cues in the environment, as opposed to either a more general emotional arousal value or a more specific emotion category distinction. Here, we demonstrate the utility of surprised facial expressions because exemplars within this emotion category take on valence values spanning the dimension of bipolar valence (positive to negative) at a consistent level of emotional arousal. Functional neuroimaging data showed that amygdala responses tracked the valence of surprised facial expressions, unconfounded by arousal. Furthermore, a machine learning classifier identified

Break spectrum analyses for small break loss of coolant accidents in a RESAR-3S Plant

International Nuclear Information System (INIS)

Fletcher, C.D.; Kullberg, C.M.

1986-03-01

A series of thermal-hydraulic analyses were performed to investigate phenomena occurring during small break loss-of-coolant-accident (LOCA) sequences in a RESAR-3S pressurized water reactor. The analysis included simulations of plant behavior using the TRAC-PF1 and RELAP5/MOD2 computer codes. Series of calculations were performed using both codes for different break sizes. The analyses presented here also served an audit function in that the results shown here were used by the US Nuclear Regulatory Commission (NRC) as an independent confirmation of similar analyses performed by Westinghouse Electric Company using another computer code. 10 refs., 62 figs., 14 tabs

Parental monitoring and rule-breaking behaviour in secondary school students

OpenAIRE

Kovačević-Lepojević Marina

2017-01-01

Parental monitoring is recognised as one of the most important family factors that are associated with rule-breaking behaviour. The objective of this paper is to determine the nature of correlations between parental monitoring and its key components (parents’ knowledge, child disclosure, parental solicitation and parental control) and rule-breaking behaviour. Additionally, the prediction of the rule-breaking behaviour by parental monitoring variables, age a...

Breaking bad news: issues relating to nursing practice.

Science.gov (United States)

Warnock, Clare

2014-07-15

The breaking of bad news was traditionally regarded to be the time when a doctor and nurse sat down with a patient and family members to provide information about, for example, a life-limiting diagnosis or a poor prognosis. However, breaking bad news is now generally accepted as a process, not a one-off event, and is considered to refer to any bad, sad or difficult information that alters patients' perceptions of their present and future. Nurses have an important role in the process of providing information and helping patients prepare for, receive, understand and cope with the bad news they have been given. This article aims to help nurses understand the process of breaking bad news and discuss the challenges and difficulties that nurses can face when they are involved with patients who have been given bad news. It also provides guidance with regard to preparing for breaking bad news, giving difficult information, responding to possible reactions, and supporting patients and their relatives after they have received bad news.

Minimally doubled fermions and spontaneous chiral symmetry breaking

Directory of Open Access Journals (Sweden)

Osmanaj (Zeqirllari Rudina

2018-01-01

Full Text Available Chiral symmetry breaking in massless QCD is a very important feature in the current understanding of low energy physics. Low - lying Dirac modes are suitable to help us understand the spontaneous chiral symmetry breaking, since the formation of a non zero chiral condensate is an effect of their accumulation near zero. The Banks – Casher relation links the spectral density of the Dirac operator to the condensate with an identity that can be read in both directions. In this work we propose a spectral method to achieve a reliable determination of the density of eigenvalues of Dirac operator near zero using the Gauss – Lanczos quadrature. In order to understand better the dynamical chiral symmetry breaking and use the method we propose, we have chosen to work with minimally doubled fermions. These kind of fermions have been proposed as a strictly local discretization of the QCD fermions action, which preserves chiral symmetry at finite cut-off. Being chiral fermions, is easier to work with them and their low - lying Dirac modes and to understand the dynamical spontaneous chiral symmetry breaking.

Minimally doubled fermions and spontaneous chiral symmetry breaking

Science.gov (United States)

Osmanaj (Zeqirllari), Rudina; Hyka (Xhako), Dafina

2018-03-01

Chiral symmetry breaking in massless QCD is a very important feature in the current understanding of low energy physics. Low - lying Dirac modes are suitable to help us understand the spontaneous chiral symmetry breaking, since the formation of a non zero chiral condensate is an effect of their accumulation near zero. The Banks - Casher relation links the spectral density of the Dirac operator to the condensate with an identity that can be read in both directions. In this work we propose a spectral method to achieve a reliable determination of the density of eigenvalues of Dirac operator near zero using the Gauss - Lanczos quadrature. In order to understand better the dynamical chiral symmetry breaking and use the method we propose, we have chosen to work with minimally doubled fermions. These kind of fermions have been proposed as a strictly local discretization of the QCD fermions action, which preserves chiral symmetry at finite cut-off. Being chiral fermions, is easier to work with them and their low - lying Dirac modes and to understand the dynamical spontaneous chiral symmetry breaking.

Secondary School Students with Disabilities at Break Time

Directory of Open Access Journals (Sweden)

Josué ARTILES RODRÍGUEZ

2017-01-01

Full Text Available Break time fulfills an important role in the social development of students, providing free time for interaction where they are able to practice their abilities of making contact with others. Students with disabilities do not see themselves in the same light because they consider this activity an unstructured one to get on with. Break planning and mediation carried out by other pupils eases relationships between both groups and offers a natural learning environment among students, according to inclusive education principles. This research has been carried out by investigating multiple cases in three special education classrooms which belong to secondary schools, with a total of 19 students with disabilities. Over the course of three months of observation, 3,420 interaction instances were obtained which were linked with the students’ interviews. The results show a lower number of relationships between students belonging to classrooms with no planned breaks in their schedule and those classrooms which did plan their breaks and peer mediation. The practical implications are discussed.

Spontaneous SUSY breaking without R symmetry in supergravity

Science.gov (United States)

Maekawa, Nobuhiro; Omura, Yuji; Shigekami, Yoshihiro; Yoshida, Manabu

2018-03-01

We discuss spontaneous supersymmetry (SUSY) breaking in a model with an anomalous U (1 )A symmetry. In this model, the size of the each term in the superpotential is controlled by the U (1 )A charge assignment and SUSY is spontaneously broken via the Fayet-Iliopoulos of U (1 )A at the metastable vacuum. In the global SUSY analysis, the gaugino masses become much smaller than the sfermion masses, because an approximate R symmetry appears at the SUSY breaking vacuum. In this paper, we show that gaugino masses can be as large as gravitino mass, taking the supergravity effect into consideration. This is because the R symmetry is not imposed so that the constant term in the superpotential, which is irrelevant to the global SUSY analysis, largely contributes to the soft SUSY breaking terms in the supergravity. As the mediation mechanism, we introduce the contributions of the field not charged under U (1 )A and the moduli field to cancel the anomaly of U (1 )A. We comment on the application of our SUSY breaking scenario to the grand unified theory.

Bagpipes and Artichokes: Surprise as a Stimulus to Learning in the Elementary Music Classroom

Science.gov (United States)

Jacobi, Bonnie Schaffhauser

2016-01-01

Incorporating surprise into music instruction can stimulate student attention, curiosity, and interest. Novelty focuses attention in the reticular activating system, increasing the potential for brain memory storage. Elementary ages are ideal for introducing novel instruments, pieces, composers, or styles of music. Young children have fewer…

Automatic first-break picking using the instantaneous traveltime attribute

KAUST Repository

Saragiotis, Christos; Alkhalifah, Tariq Ali

2012-01-01

Picking the first breaks is an important step in seismic processing. The large volume of the seismic data calls for automatic and objective picking. We introduce a new automatic first-break picker, which uses specifically designed time windows

Parameterization of planetary wave breaking in the middle atmosphere

Science.gov (United States)

Garcia, Rolando R.

1991-01-01

A parameterization of planetary wave breaking in the middle atmosphere has been developed and tested in a numerical model which includes governing equations for a single wave and the zonal-mean state. The parameterization is based on the assumption that wave breaking represents a steady-state equilibrium between the flux of wave activity and its dissipation by nonlinear processes, and that the latter can be represented as linear damping of the primary wave. With this and the additional assumption that the effect of breaking is to prevent further amplitude growth, the required dissipation rate is readily obtained from the steady-state equation for wave activity; diffusivity coefficients then follow from the dissipation rate. The assumptions made in the derivation are equivalent to those commonly used in parameterizations for gravity wave breaking, but the formulation in terms of wave activity helps highlight the central role of the wave group velocity in determining the dissipation rate. Comparison of model results with nonlinear calculations of wave breaking and with diagnostic determinations of stratospheric diffusion coefficients reveals remarkably good agreement, and suggests that the parameterization could be useful for simulating inexpensively, but realistically, the effects of planetary wave transport.

Experimental study on fundamental phenomena in HTGR small break air-ingress accident

International Nuclear Information System (INIS)

Kim, Jae Soon; Hwang, Jin-Seok; Kim, Eung Soo; Kim, Byung Jun; Oh, Chang Ho

2016-01-01

Highlights: • Air-ingress phenomena on the small break in a HTGR are experimentally investigated. • Experiment is investigated for various break sizes, angles, and density ratios. • Maximum air-ingress rate is observed at 120° in break angle. • This study reveals that air-ingress in the small break is governed by; buoyancy and flow inertia. • A non-dimensional parameter is newly proposed to determine the air-ingress flow regimes. • Newly proposed parameter is based on buoyancy versus inertia force. - Abstract: This study experimentally investigates fundamental phenomena in the HTGR small break air-ingress accident. Several important parameters including density ratio, break angle, break size, and main flow velocity are considered in the measurement and the analysis. The test-section is made of a circular pipe with small holes drilled around the surface and it is installed in the helium/air flow circulation loop. Oxygen concentrations and flow rates are recorded during the tests with fixed break angles, break sizes, and flow velocities for measurement of the air-ingress rates. According to the experimental results, the higher density difference leads to the higher rates of air-ingress with large sensitivity of the break angles. It is also found that the break angle significantly affects the air-ingress rates, which is gradually increased from 0° to 120° and suddenly decreased to 180°. The minimum air ingress rate is found at 0° and the maximum, at 110°. The air-ingress rate increases with the break size due to the increased flow-exchange area. However, it is not directly proportional to the break area due to the complexity of the phenomena. The increased flow velocity in the channel inside enhances the air-ingress process. However, among all the parameters, the main flow velocity exhibits the lowest effect on this process. In this study, the Froude Number relevant to the small break air-ingress conditions are newly defined considering both heavy

CNN for breaking text-based CAPTCHA with noise

Science.gov (United States)

Liu, Kaixuan; Zhang, Rong; Qing, Ke

2017-07-01

A CAPTCHA ("Completely Automated Public Turing test to tell Computers and Human Apart") system is a program that most humans can pass but current computer programs could hardly pass. As the most common type of CAPTCHAs , text-based CAPTCHA has been widely used in different websites to defense network bots. In order to breaking textbased CAPTCHA, in this paper, two trained CNN models are connected for the segmentation and classification of CAPTCHA images. Then base on these two models, we apply sliding window segmentation and voting classification methods realize an end-to-end CAPTCHA breaking system with high success rate. The experiment results show that our method is robust and effective in breaking text-based CAPTCHA with noise.

Strong Electroweak Symmetry Breaking and Spin-0 Resonances

International Nuclear Information System (INIS)

Evans, Jared; Luty, Markus A.

2009-01-01

We argue that theories of the strong electroweak symmetry breaking sector necessarily contain new spin 0 states at the TeV scale in the tt and tb/bt channels, even if the third generation quarks are not composite at the TeV scale. These states couple sufficiently strongly to third generation quarks to have significant production at LHC via gg→φ 0 or gb→tφ - . The existence of narrow resonances in QCD suggests that the strong electroweak breaking sector contains narrow resonances that decay to tt or tb/bt, with potentially significant branching fractions to 3 or more longitudinal W and Z bosons. These may give new 'smoking gun' signals of strong electroweak symmetry breaking.

Microfluidic droplet generator with controlled break-up mechanism

KAUST Repository

Gonzalez, David Conchouso

2017-04-13

Droplet generation devices and systems that parallelize droplet generation devices are provided. The droplet generation devices can include a symmetric block-and-break system and a tapered droplet generation zone. The symmetric block-and-break system can include a pair of break channels and a pair of bypass channels symmetrically arranged with respect to the dispersed-phase input channel and the output channel. The droplet generation devices can generate monodisperse droplets with a predefined volume over a range of flow rates, pressures, and fluid properties. The droplet generation devices are therefore capable of parallelization to achieve large-capacity droplet generation, e.g. greater than 1 L/hr, with small overall coefficients of variation.

Toughening elastomers with sacrificial bonds and watching them break.

Science.gov (United States)

Ducrot, Etienne; Chen, Yulan; Bulters, Markus; Sijbesma, Rint P; Creton, Costantino

2014-04-11

Elastomers are widely used because of their large-strain reversible deformability. Most unfilled elastomers suffer from a poor mechanical strength, which limits their use. Using sacrificial bonds, we show how brittle, unfilled elastomers can be strongly reinforced in stiffness and toughness (up to 4 megapascals and 9 kilojoules per square meter) by introducing a variable proportion of isotropically prestretched chains that can break and dissipate energy before the material fails. Chemoluminescent cross-linking molecules, which emit light as they break, map in real time where and when many of these internal bonds break ahead of a propagating crack. The simple methodology that we use to introduce sacrificial bonds, combined with the mapping of where bonds break, has the potential to stimulate the development of new classes of unfilled tough elastomers and better molecular models of the fracture of soft materials.

Functional work breaks in a high-demanding work environment: an experimental field study.

Science.gov (United States)

Scholz, André; Ghadiri, Argang; Singh, Usha; Wendsche, Johannes; Peters, Theo; Schneider, Stefan

2018-02-01

Work breaks are known to have positive effects on employees' health, performance and safety. Using a sample of twelve employees working in a stressful and cognitively demanding working environment, this experimental field study examined how different types of work breaks (boxing, deep relaxation and usual breaks) affect participants' mood, cognitive performance and neurophysiological state compared to a control condition without any break. In a repeated measures experimental design, cognitive performance was assessed using an auditory oddball test and a Movement Detection Test. Brain cortical activity was recorded using electroencephalography. Individual's mood was analysed using a profile of mood state. Although neurophysiological data showed improved relaxation of cortical state after boxing (vs. 'no break' and 'deep relaxation'), neither performance nor mood assessment showed similar results. It remains questionable whether there is a universal work break type that has beneficial effects for all individuals. Practitioner Summary: Research on work breaks and their positive effects on employees' health and performance often disregards break activities. This experimental field study in a stressful working environment investigated the effect of different work break activities. A universal work break type that is beneficial for this workplace could not be identified.

Flavour breaking effects in the pseudoscalar meson decay constants

Energy Technology Data Exchange (ETDEWEB)

Bornyakov, V.G. [Institute for High Energy Physics, Protvino (Russian Federation); Institute of Theoretical and Experimental Physics, Moscow (Russian Federation); Far Eastern Federal Univ., Vladivostok (Russian Federation). School of Biomedicine; Horsley, R. [Edinburgh Univ. (United Kingdom). School of Physics and Astronomy; Nakamura, Y. [RIKEN Advanced Institute for Computational Science, Hyogo (Japan); Perlt, H.; Schiller, A. [Leipzig Univ. (Germany). Inst. fuer Theoretische Physik; Pleiter, D. [Forschungszentrum Juelich (Germany). Juelich Supercomputing Centre; Regensburg Univ. (Germany). Inst. fuer Theoretische Physik; Rakow, P.E.L. [Liverpool Univ. (United Kingdom). Theoretical Physics Division; Schierholz, G. [DESY Hamburg (Germany); Stueben, H. [Hamburg Univ. (Germany). Regionales Rechenzentrum; Zanotti, J.M. [Adelaide Univ. (Australia). CSSM, Dept. of Physics; Collaboration: QCDSF-UKQCD Collaborations

2016-12-14

The SU(3) flavour symmetry breaking expansion in up, down and strange quark masses is extended from hadron masses to meson decay constants. This allows a determination of the ratio of kaon to pion decay constants in QCD. Furthermore when using partially quenched valence quarks the expansion is such that SU(2) isospin breaking effects can also be determined. It is found that the lowest order SU(3) flavour symmetry breaking expansion (or Gell-Mann-Okubo expansion) works very well. Simulations are performed for 2+1 flavours of clover fermions at four lattice spacings.

Violent breaking wave impacts

DEFF Research Database (Denmark)

Bredmose, Henrik; Peregrine, D.H.; Bullock, G.N.

2009-01-01

When an ocean wave breaks against a steep-fronted breakwater, sea wall or a similar marine structure, its impact on the structure can be very violent. This paper describes the theoretical studies that, together with field and laboratory investigations, have been carried out in order to gain a bet...

Aging impairs double-strand break repair by homologous recombination in Drosophila germ cells.

Science.gov (United States)

Delabaere, Laetitia; Ertl, Henry A; Massey, Dashiell J; Hofley, Carolyn M; Sohail, Faraz; Bienenstock, Elisa J; Sebastian, Hans; Chiolo, Irene; LaRocque, Jeannine R

2017-04-01

Aging is characterized by genome instability, which contributes to cancer formation and cell lethality leading to organismal decline. The high levels of DNA double-strand breaks (DSBs) observed in old cells and premature aging syndromes are likely a primary source of genome instability, but the underlying cause of their formation is still unclear. DSBs might result from higher levels of damage or repair defects emerging with advancing age, but repair pathways in old organisms are still poorly understood. Here, we show that premeiotic germline cells of young and old flies have distinct differences in their ability to repair DSBs by the error-free pathway homologous recombination (HR). Repair of DSBs induced by either ionizing radiation (IR) or the endonuclease I-SceI is markedly defective in older flies. This correlates with a remarkable reduction in HR repair measured with the DR-white DSB repair reporter assay. Strikingly, most of this repair defect is already present at 8 days of age. Finally, HR defects correlate with increased expression of early HR components and increased recruitment of Rad51 to damage in older organisms. Thus, we propose that the defect in the HR pathway for germ cells in older flies occurs following Rad51 recruitment. These data reveal that DSB repair defects arise early in the aging process and suggest that HR deficiencies are a leading cause of genome instability in germ cells of older animals. © 2016 The Authors. Aging Cell published by the Anatomical Society and John Wiley & Sons Ltd.

Chiral symmetry breaking in QED for weak coupling

Energy Technology Data Exchange (ETDEWEB)

Huang, J.C. (Missouri Univ., Columbia, MO (USA). Dept. of Physics and Astronomy); Shen, T.C. (Illinois Univ., Urbana, IL (USA). Beckman Inst.)

1991-05-01

We examine the procedure for studying chiral symmetry breaking for weak coupling in QED. We note that while the lowest non-trivial order calculations using numerical solutions to the Schwinger-Dyson equation indicate a breaking of chiral symmetry, the neglected higher-order contributions to the effective potential have imaginary values which can indicate possible instabilities in the theory. (author).

Chiral symmetry breaking in QED for weak coupling

International Nuclear Information System (INIS)

Huang, J.C.; Shen, T.C.

1991-01-01

We examine the procedure for studying chiral symmetry breaking for weak coupling in QED. We note that while the lowest non-trivial order calculations using numerical solutions to the Schwinger-Dyson equation indicate a breaking of chiral symmetry, the neglected higher-order contributions to the effective potential have imaginary values which can indicate possible instabilities in the theory. (author)

Why and How Java Developers Break APIs

OpenAIRE

Brito, Aline; Xavier, Laerte; Hora, Andre; Valente, Marco Tulio

2018-01-01

Modern software development depends on APIs to reuse code and increase productivity. As most software systems, these libraries and frameworks also evolve, which may break existing clients. However, the main reasons to introduce breaking changes in APIs are unclear. Therefore, in this paper, we report the results of an almost 4-month long field study with the developers of 400 popular Java libraries and frameworks. We configured an infrastructure to observe all changes in these libraries and t...

Supramolecular Systems and Chemical Reactions in Single-Molecule Break Junctions.

Science.gov (United States)

Li, Xiaohui; Hu, Duan; Tan, Zhibing; Bai, Jie; Xiao, Zongyuan; Yang, Yang; Shi, Jia; Hong, Wenjing

2017-04-01

The major challenges of molecular electronics are the understanding and manipulation of the electron transport through the single-molecule junction. With the single-molecule break junction techniques, including scanning tunneling microscope break junction technique and mechanically controllable break junction technique, the charge transport through various single-molecule and supramolecular junctions has been studied during the dynamic fabrication and continuous characterization of molecular junctions. This review starts from the charge transport characterization of supramolecular junctions through a variety of noncovalent interactions, such as hydrogen bond, π-π interaction, and electrostatic force. We further review the recent progress in constructing highly conductive molecular junctions via chemical reactions, the response of molecular junctions to external stimuli, as well as the application of break junction techniques in controlling and monitoring chemical reactions in situ. We suggest that beyond the measurement of single molecular conductance, the single-molecule break junction techniques provide a promising access to study molecular assembly and chemical reactions at the single-molecule scale.

Some geological and geophysical aspects in electric rock breaking

CSIR Research Space (South Africa)

Henry, G

2011-08-01

Full Text Available an important role in any rock-breaking techniques using electrical power. The research done at the CSIR's Centre for Mining Innovation is towards understanding the science behind electric rock breaking. This understanding would lead to a practical method...

Spontaneous breaking of supersymmetry and gauge invariance in supergravity

Energy Technology Data Exchange (ETDEWEB)

Sohnius, M. (European Organization for Nuclear Research, Geneva (Switzerland)); West, P. (King' s Coll., London (UK). Dept. of Mathematics)

1982-08-09

Using the new minimal auxillary fields of N = 1 supergravity it is found possible to construct a model of local supersymmetry which spontaneously breaks both supersymmetry and gauge invariance. The status of the cosmological constant resulting from this breaking is discussed.

Predicting appointment breaking.

Science.gov (United States)

Bean, A G; Talaga, J

1995-01-01

The goal of physician referral services is to schedule appointments, but if too many patients fail to show up, the value of the service will be compromised. The authors found that appointment breaking can be predicted by the number of days to the scheduled appointment, the doctor's specialty, and the patient's age and gender. They also offer specific suggestions for modifying the marketing mix to reduce the incidence of no-shows.

Toll-Like Receptor Pathways in Autoimmune Diseases.

Science.gov (United States)

Chen, Ji-Qing; Szodoray, Peter; Zeher, Margit

2016-02-01

Autoimmune diseases are a family of chronic systemic inflammatory disorders, characterized by the dysregulation of the immune system which finally results in the break of tolerance to self-antigen. Several studies suggest that Toll-like receptors (TLRs) play an essential role in the pathogenesis of autoimmune diseases. TLRs belong to the family of pattern recognition receptors (PRRs) that recognize a wide range of pathogen-associated molecular patterns (PAMPs). TLRs are type I transmembrane proteins and located on various cellular membranes. Two main groups have been classified based on their location; the extracelluar group referred to the ones located on the plasma membrane while the intracellular group all located in endosomal compartments responsible for the recognition of nucleic acids. They are released by the host cells and trigger various intracellular pathways which results in the production of proinflammatory cytokines, chemokines, as well as the expression of co-stimulatory molecules to protect against invading microorganisms. In particular, TLR pathway-associated proteins, such as IRAK, TRAF, and SOCS, are often dysregulated in this group of diseases. TLR-associated gene expression profile analysis together with single nucleotide polymorphism (SNP) assessment could be important to explain the pathomechanism driving autoimmune diseases. In this review, we summarize recent findings on TLR pathway regulation in various autoimmune diseases, including Sjögren's syndrome (SS), systemic lupus erythematosus (SLE), multiple sclerosis (MS), rheumatoid arthritis (RA), systemic sclerosis (SSc), and psoriasis.

Tel2 mediates activation and localization of ATM/Tel1 kinase to a double-strand break.

Science.gov (United States)

Anderson, Carol M; Korkin, Dmitry; Smith, Dana L; Makovets, Svetlana; Seidel, Jeffrey J; Sali, Andrej; Blackburn, Elizabeth H

2008-04-01

The kinases ATM and ATR (Tel1 and Mec1 in the yeast Saccharomyces cerevisiae) control the response to DNA damage. We report that S. cerevisiae Tel2 acts at an early step of the TEL1/ATM pathway of DNA damage signaling. We show that Tel1 and Tel2 interact, and that even when Tel1 protein levels are high, this interaction is specifically required for Tel1 localization to a DNA break and its activation of downstream targets. Computational analysis revealed structural homology between Tel2 and Ddc2 (ATRIP in vertebrates), a partner of Mec1, suggesting a common structural principle used by partners of phoshoinositide 3-kinase-like kinases.

Distinct spatio temporal patterns and PARP dependence of XRCC1 recruitment to single-strand break and base excision repair

International Nuclear Information System (INIS)

Campalans, Anna; Kortulewski, Thierry; Amouroux, Rachel; Radicella, J. Pablo; Menoni, Herve; Vermeulen, Wim

2013-01-01

Single-strand break repair (SSBR) and base excision repair (BER) of modified bases and abasic sites share several players. Among them is XRCC1, an essential scaffold protein with no enzymatic activity, required for the coordination of both pathways. XRCC1 is recruited to SSBR by PARP-1, responsible for the initial recognition of the break. The recruitment of XRCC1 to BER is still poorly understood. Here we show by using both local and global induction of oxidative DNA base damage that XRCC1 participation in BER complexes can be distinguished from that in SSBR by several criteria. We show first that XRCC1 recruitment to BER is independent of PARP. Second, unlike SSBR complexes that are assembled within minutes after global damage induction, XRCC1 is detected later in BER patches, with kinetics consistent with the repair of oxidized bases. Third, while XRCC1-containing foci associated with SSBR are formed both in eu- and heterochromatin domains, BER complexes are assembled in patches that are essentially excluded from heterochromatin and where the oxidized bases are detected. (authors)

Experiment and analyses on intentional secondary-side depressurization during PWR small break LOCA. Effects of depressurization rate and break area on core liquid level behavior

International Nuclear Information System (INIS)

Asaka, Hideaki; Ohtsu, Iwao; Anoda, Yoshinari; Kukita, Yutaka

1997-01-01

The effects of the secondary-side depressurization rate and break area on the core liquid level behavior during a PWR small-break LOCA were studied using experimental data from the Large Scale Test Facility (LSTF) and by using analysis results obtained with a JAERI modified version of RELAP5/MOD3 code. The LSTF is a 1/ 48 volumetrically scaled full-height integral model of a Westinghouse-type PWR. The code reproduced the thermal-hydraulic responses, observed in the experiment, for important parameters such as the primary and secondary side pressures and core liquid level behavior. The sensitivity of the core minimum liquid level to the depressurization rate and break area was studied by using the code assessed above. It was found that the core liquid level took a local minimum value for a given break area as a function of secondary side depressurization rate. Further efforts are, however, needed to quantitatively define the maximum core temperature as a function of break area and depressurization rate. (author)

Numerical Simulation of a Seaway with Breaking

Science.gov (United States)

Dommermuth, Douglas; O'Shea, Thomas; Brucker, Kyle; Wyatt, Donald

2012-11-01

The focus of this presentation is to describe the recent efforts to simulate a fully non-linear seaway with breaking by using a high-order spectral (HOS) solution of the free-surface boundary value problem to drive a three-dimensional Volume of Fluid (VOF) solution. Historically, the two main types of simulations to simulate free-surface flows are the boundary integral equations method (BIEM) and high-order spectral (HOS) methods. BIEM calculations fail at the point at which the surface impacts upon itself, if not sooner, and HOS methods can only simulate a single valued free-surface. Both also employ a single-phase approximation in which the effects of the air on the water are neglected. Due to these limitations they are unable to simulate breaking waves and air entrainment. The Volume of Fluid (VOF) method on the other hand is suitable for modeling breaking waves and air entrainment. However it is computationally intractable to generate a realistic non-linear sea-state. Here, we use the HOS solution to quickly drive, or nudge, the VOF solution into a non-linear state. The computational strategies, mathematical formulation, and numerical implementation will be discussed. The results of the VOF simulation of a seaway with breaking will also be presented, and compared to the single phase, single valued HOS results.

Spontaneous breaking of supersymmetry and gauge invariance in supergravity

International Nuclear Information System (INIS)

Sohnius, M.; West, P.

1982-01-01

Using the new minimal auxillary fields of N = 1 supergravity it is found possible to construct a model of local supersymmetry which spontaneously breaks both supersymmetry and gauge invariance. The status of the cosmological constant resulting from this breaking is discussed. (orig.)

Induction of DNA strand breaks in 14C-labelled cells

International Nuclear Information System (INIS)

Sundell-Bergman, S.; Johanson, K.J.

1979-01-01

Chinese hamster cells grown in vitro were labelled with 14 C-thymidine for 18 hours and after 3 hours in non-radioactive medium they were stored at 0 0 C for various periods ( 1 to 12 hours). During this treatment a number of DNA strand breaks were induced by 14 C decay which were not repaired at 0 0 C. The number of DNA strand breaks was determined using the DNA unwinding technique. At 0.5-1 dpm per cell a detectable number of DNA strand breaks were found. Treatment for six hours (1 dpm per cell) reduced the percentage of double-stranded DNA from 80 to 70%, corresponding to about 750 DNA strand breaks per cell. The rejoining of DNA strand breaks was studied after treatment for 12 hours at 0 0 C followed by incubation of the cells for various periods at 37 0 C. Most of the DNA strand breaks induced by 14 C decay at 0 0 C were repaired after incubation at 37 0 C for 15 minutes. Assuming an absorbed dose of 1.8 mGy per 14 C decay to the cell nucleus an RBE value close to 1 was found for internal irradiation from 14 C decay as compared with 60 Co-gamma irradiation. (author)

Forthcoming Break-Even Conditions of Tokamak Plasma Performance for Fusion Energy Development

Science.gov (United States)

Hiwatari, Ryoji; Okano, Kunihiko; Asaoka, Yoshiyuki; Tokimatsu, Koji; Konishi, Satoshi; Ogawa, Yuichi

The present study reveals forthcoming break-even conditions of tokamak plasma performance for the fusion energy development. The first condition is the electric break-even condition, which means that the gross electric power generation is equal to the circulating power in a power plant. This is required for fusion energy to be recognized as a suitable candidate for an alternative energy source. As for the plasma performance (normalized beta value ΒN), confinement improvement factor for H-mode HH, the ratio of plasma density to Greenwald density fnGW), the electric break-even condition requires the simultaneous achievement of 1.2 market. By using a long-term world energy scenario, a break-even price for introduction of fusion energy in the year 2050 is estimated to lie between 65 mill/kWh and 135 mill/kWh under the constraint of 550 ppm CO2 concentration in the atmosphere. In the present study, this break-even price is applied to the economic break-even condition. However, because this break-even price is based on the present energy scenario including uncertainties, the economic break-even condition discussed here should not be considered the sufficient condition, but a necessary condition. Under the conditions of Btmax = 16 T, ηe = 40 %, plant availability 60 %, and a radial build with/without CS coil, the economic break-even condition requires ΒN ˜ 5.0 for 65 mill/kWh of lower break-even price case. Finally, the present study reveals that the demonstration of steady-state operation with ΒN ˜ 3.0 in the ITER project leads to the upper region of the break-even price in the present world energy scenario, which implies that it is necessary to improve the plasma performance beyond that of the ITER advanced plasma operation.

Prophylactic treatment of retinal breaks

DEFF Research Database (Denmark)

Blindbæk, Søren Leer; Grauslund, Jakob

2015-01-01

Prophylactic treatment of retinal breaks has been examined in several studies and reviews, but so far, no studies have successfully applied a systematic approach. In the present systematic review, we examined the need of follow-up after posterior vitreous detachment (PVD) - diagnosed by slit...... published before 2012. Four levels of screening identified 13 studies suitable for inclusion in this systematic review. No meta-analysis was conducted as no data suitable for statistical analysis were identified. In total, the initial examination after symptomatic PVD identified 85-95% of subsequent retinal......-47% of cases, respectively. The cumulated incidence of RRD despite prophylactic treatment was 2.1-8.8%. The findings in this review suggest that follow-up after symptomatic PVD is only necessary in cases of incomplete retinal examination at presentation. Prophylactic treatment of symptomatic retinal breaks...

Structural changes in Central and Eastern European economies: breaking news or breaking the ice?

Czech Academy of Sciences Publication Activity Database

Égert, B.; Jiménez-Rodríguez, R.; Kočenda, Evžen; Morales-Zumaquero, A.

2006-01-01

Roč. 39, 1-2 (2006), s. 85-103 ISSN 1573-9414 R&D Projects: GA MŠk LC542 Institutional research plan: CEZ:MSM0021620846 Keywords : Central and Eastern European (CEE) countries * multiple structural breaks * volatility Subject RIV: AH - Economics

STRESS FRACTURE OF THE ULNA IN A BREAK-DANCER

Directory of Open Access Journals (Sweden)

Yu-Hsu Chen

2008-12-01

Full Text Available Break dancing is a popular activity in teenagers and is associated with severe trauma to bones and tissues. We report the first known case of a break dancer with an ulnar stress fracture. Such injuries occur in a variety of sports due to substantial stress on the ulna and repetitive excessive rotation of the forearm. In this study we describe a patient who experienced an ulnar stress fracture during break dancing training. The diagnosis was established by history and physical examination. Initial radiographic findings were negative. However, radiographs taken 3 months after initial presented revealed callus formation over the ulnar shaft. This suggested that readjustment is required in break dancing training protocols. It is important to increase awareness of this injury among physicians to expedite the diagnosis and to prevent the possibility of conversion to an overt fracture in the future

The self-breaking mechanism of atomic scale Au nanocontacts

International Nuclear Information System (INIS)

Nakazumi, Tomoka; Kiguchi, Manabu; Wada, Yasuo

2012-01-01

We have investigated the self-breaking mechanism of atomic scale Au nanocontacts at room temperature in air. In the conductance traces, we frequently observed traces showing both a 1G 0 (2e 2 /h) and 3G 0 plateaux, or only a 2G 0 plateau in the conductance regime below 3G 0 . The statistical analysis showed a negative correlation between the appearance of 1G 0 and 2G 0 peaks, and a positive correlation between 1G 0 and 3G 0 peaks. This conductance behavior suggested that the symmetric triple atomic rows changed into a symmetric single row, while the asymmetric double rows broke without changing into a symmetric single row. The regular self-breaking process can be explained by the breaking of the thermodynamically stable Au nanocontacts which were formed during the self-breaking of the contacts. (paper)

Forthcoming break-even conditions of tokamak plasma performance for fusion energy development

International Nuclear Information System (INIS)

Hiwatari, Ryoji; Okano, Kunihiko; Asaoka, Yoshiyuki; Tokimatsu, Koji; Konishi, Satoshi; Ogawa, Yuichi

2005-01-01

The present study reveals forthcoming break-even conditions of tokamak plasma performance for the fusion energy development. The first condition is the electric break-even condition, which means that the gross electric power generation is equal to the circulating power in a power plant. This is required for fusion energy to be recognized as a suitable candidate for an alternative energy source. As for the plasma performance (normalized beta value β N , confinement improvement factor for H-mode HH, the ratio of plasma density to Greenwald density fn GW ), the electric break-even condition requires the simultaneous achievement of 1.2 N GW tmax =16 T, thermal efficiency η e =30%, and current drive power P NBI N ∼1.8, HH≠1.0, and fn GW ∼0.9, which correspond to the ITER reference operation parameters, have a strong potential to achieve the electric break-even condition. The second condition is the economic break-even condition, which is required for fusion energy to be selected as an alternative energy source in the energy market. By using a long-term world energy scenario, a break-even price for introduction of fusion energy in the year 2050 is estimated to lie between 65 mill/kWh and 135 mill/kWh under the constraint of 550 ppm CO 2 concentration in the atmosphere. In the present study, this break-even price is applied to the economic break-even condition. However, because this break-even price is based on the present energy scenario including uncertainties, the economic break-even condition discussed here should not be considered the sufficient condition, but a necessary condition. Under the conditions of B tmax =16 T, η e =40%, plant availability 60%, and a radial build with/without CS coil, the economic break-even condition requires β N ∼5.0 for 65 mill/kWh of lower break-even price case. Finally, the present study reveals that the demonstration of steady-state operation with β N ∼3.0 in the ITER project leads to the upper region of the break

Updated pipe break analysis for Advanced Neutron Source Reactor conceptual design

International Nuclear Information System (INIS)

Wendel, M.W.; Chen, N.C.J.; Yoder, G.L.

1994-01-01

The Advanced Neutron Source Reactor (ANSR) is a research reactor to be built at the Oak Ridge National Laboratory that will supply the highest continuous neutron flux levels of any reactor in the world. It uses plate-type fuel with high-mass-flux and highly subcooled heavy water as the primary coolant. The Conceptual Safety Analysis for the ANSR was completed in June 1992. The thermal-hydraulic pipe-break safety analysis (performed with a specialized version of RELAP5/MOD3) focused primarily on double-ended guillotine breaks of the primary piping and some core-damage mitigation options for such an event. Smaller, instantaneous pipe breaks in the cold- and hot-leg piping were also analyzed to a limited extent. Since the initial analysis for the conceptual design was completed, several important changes to the RELAP5 input model have been made reflecting improvements in the fuel grading and changes in the elevation of the primary coolant pumps. Also, a new philosophy for pipe-break safety analysis (similar to that adopted for the New Production Reactor) accentuates instantaneous, limited flow area pipe-break accidents in addition to finite-opening-time, double-ended guillotine breaks of the major coolant piping. This paper discloses the results of the most recent instantaneous pipe-break calculations

Particle-Hole Symmetry Breaking in the Pseudogap State of Bi2201

Energy Technology Data Exchange (ETDEWEB)

Hashimoto, M.; /SIMES, Stanford /Stanford U., Geballe Lab. /LBNL, ALS; He, R.-H.; /aff SIMES, Stanford /Stanford U., Geballe Lab.; Tanaka, K.; /aff SIMES, Stanford /Stanford U., Geballe Lab. /LBNL, ALS /Osaka U.; Testaud, J.P.; /SIMES, Stanford /Stanford U., Geballe Lab. /LBNL, ALS; Meevasana1, W.; Moore, R.G.; Lu, D.H.; /SIMES, Stanford /Stanford U., Geballe Lab.; Yao, H.; /SIMES, Stanford; Yoshida, Y.; Eisaki, H.; /AIST, Tsukuba; Devereaux, T.P.; /SIMES, Stanford /Stanford U., Geballe Lab.; Hussain, Z.; /LBNL, ALS; Shen, Z.-X.; /SIMES, Stanford /Stanford U., Geballe Lab.

2011-08-19

In conventional superconductors, a gap exists in the energy absorption spectrum only below the transition temperature (T{sub c}), corresponding to the energy price to pay for breaking a Cooper pair of electrons. In high-T{sub c} cuprate superconductors above T{sub c}, an energy gap called the pseudogap exists, and is controversially attributed either to pre-formed superconducting pairs, which would exhibit particle-hole symmetry, or to competing phases which would typically break it. Scanning tunnelling microscopy (STM) studies suggest that the pseudogap stems from lattice translational symmetry breaking and is associated with a different characteristic spectrum for adding or removing electrons (particle-hole asymmetry). However, no signature of either spatial or energy symmetry breaking of the pseudogap has previously been observed by angle-resolved photoemission spectroscopy (ARPES). Here we report ARPES data from Bi2201 which reveals both particle-hole symmetry breaking and dramatic spectral broadening indicative of spatial symmetry breaking without long range order, upon crossing through T* into the pseudogap state. This symmetry breaking is found in the dominant region of the momentum space for the pseudogap, around the so-called anti-node near the Brillouin zone boundary. Our finding supports the STM conclusion that the pseudogap state is a broken-symmetry state that is distinct from homogeneous superconductivity.

Dynamics of symmetry breaking in strongly coupled QED

International Nuclear Information System (INIS)

Bardeen, W.A.

1988-10-01

I review the dynamical structure of strong coupled QED in the quenched planar limit. The symmetry structure of this theory is examined with reference to the nature of both chiral and scale symmetry breaking. The renormalization structure of the strong coupled phase is analysed. The compatibility of spontaneous scale and chiral symmetry breaking is studied using effective lagrangian methods. 14 refs., 3 figs

Chiral symmetry breaking and cooling in lattice QCD

International Nuclear Information System (INIS)

Woloshyn, R.M.; Lee, F.X.

1995-08-01

Chiral symmetry breaking is calculated as a function of cooling in quenched lattice QCD. A non-zero signal is found for the chiral condensate beyond one hundred cooling steps, suggesting that there is chiral symmetry breaking associated with instantons. Quantitatively, the chiral condensate in cooled gauge field configurations is small compared to the value without cooling. (author) 7 refs., 1 tab., 3 figs

Stochastic mechanism of symmetry breaking

International Nuclear Information System (INIS)

Baseyan, H.Z.

1983-01-01

A new symmetry breaking mechanism conditioned by presence of random fields in vacuum is proposed. Massive Yang-Mills fields finally arise, that may be interpreted as ''macroscopic'' manifestation of the ''microscopic'' Yang-Mills massless theory

Biological defense mechanisms against DNA double-strand break and their possible medical applications

International Nuclear Information System (INIS)

Matsumoto, Yoshihisa

2011-01-01

Radiation is now widely used for clinical diagnosis and therapeutics. On the other hand, radiation influences various tissues represented by immunological and reproductive systems, and is also recognized as one of the cause of carcinogenesis. Such pleiotropic effects of radiation are mediated through generation of damages on DNA molecule, vitally important genetic macromolecule. Among various types of DNA damages, double-strand break (DSB) is considered most critical and, therefore, responsible for biological effects. DSB is repaired mainly through two pathways: non-homologous end joining (NHEJ) and homologous recombination (HR). Understanding of these mechanisms has been greatly deepened in past 20 years and is now providing a promising approach toward cancer therapy. We have studied the mechanisms of NHEJ, focusing especially on the role of phosphorylation and the assembly of machinery therein, which will be introduced below. (author)

Review on research of small break loss of coolant accident

International Nuclear Information System (INIS)

Bo Jinhai; Wang Fei

1998-01-01

The Small Break Loss of Coolant Accident (SBLOCA) and its research art-of -work are reviewed. A typical SBLOCA process in Pressurized Water Reactor (PWR) and Boiling Water Reactor (BWR) and the influence of break size, break location and reactor coolant pump on the process are described. The existing papers are classified in two categories: experimental and numerical modeling, with the primary experimental apparatuses in the world listed and the research works on SBLOCA summarized

DNA turnover and strand breaks in Escherichia coli

International Nuclear Information System (INIS)

Hanawalt, P.; Grivell, A.; Nakayama, H.

1975-01-01

The extent of DNA turnover has been measured in a dnaB mutant of Escherichia coli, temperature sensitive for semiconservative DNA replication. At the nonpermissive temperature about 0.02 percent of the deoxynucleotides in DNA are exchanged per generation period. This turnover rate is markedly depressed in the presence of rifampicin. During thymine starvation strand breaks accumulate in the DNA of E. coli strains that are susceptible to thymineless death. Rifampicin suppresses the appearance of these breaks, consistent with our hypothesis that transcription may be accompanied by repairable single-strand breaks in DNA. DNA turnover is enhanced severalfold in strands containing 5-bromodeoxyuridine in place of thymidine, possibly because the analog (or the deoxyuridine, following debromination) is sometimes recognized and excised

The Educational Philosophies of Mordecai Kaplan and Michael Rosenak: Surprising Similarities and Illuminating Differences

Science.gov (United States)

Schein, Jeffrey; Caplan, Eric

2014-01-01

The thoughts of Mordecai Kaplan and Michael Rosenak present surprising commonalities as well as illuminating differences. Similarities include the perception that Judaism and Jewish education are in crisis, the belief that Jewish peoplehood must include commitment to meaningful content, the need for teachers to teach from a position of…

DNA breaks early in replication in B cell cancers

Science.gov (United States)

Research by scientists at the NCI has identified a new class of DNA sites in cells that break early in the replication process. They found that these break sites correlate with damage often seen in B cell cancers, such as diffuse large B cell lymphoma.

The Alternative NF-κB Pathway in Regulatory T Cell Homeostasis and Suppressive Function.

Science.gov (United States)

Grinberg-Bleyer, Yenkel; Caron, Rachel; Seeley, John J; De Silva, Nilushi S; Schindler, Christian W; Hayden, Matthew S; Klein, Ulf; Ghosh, Sankar

2018-04-01

CD4 + Foxp3 + regulatory T cells (Tregs) are essential regulators of immune responses. Perturbation of Treg homeostasis or function can lead to uncontrolled inflammation and autoimmunity. Therefore, understanding the molecular mechanisms involved in Treg biology remains an active area of investigation. It has been shown previously that the NF-κB family of transcription factors, in particular, the canonical pathway subunits, c-Rel and p65, are crucial for the development, maintenance, and function of Tregs. However, the role of the alternative NF-κB pathway components, p100 and RelB, in Treg biology remains unclear. In this article, we show that conditional deletion of the p100 gene, nfkb2 , in Tregs, resulted in massive inflammation because of impaired suppressive function of nfkb2 -deficient Tregs. Surprisingly, mice lacking RelB in Tregs did not exhibit the same phenotype. Instead, deletion of both relb and nfkb2 rescued the inflammatory phenotype, demonstrating an essential role for p100 as an inhibitor of RelB in Tregs. Our data therefore illustrate a new role for the alternative NF-κB signaling pathway in Tregs that has implications for the understanding of molecular pathways driving tolerance and immunity. Copyright © 2018 by The American Association of Immunologists, Inc.

Aluminum break-point contacts

NARCIS (Netherlands)

Heinemann, Martina; Groot, R.A. de

1997-01-01

Ab initio molecular dynamics is used to study the contribution of a single Al atom to an aluminum breakpoint contact during the final stages of breaking and the initial stages of the formation of such a contact. A hysteresis effect is found in excellent agreement with experiment and the form of the

Explicit Supersymmetry Breaking on Boundaries of Warped Extra Dimensions

Energy Technology Data Exchange (ETDEWEB)

Hall, Lawrence J.; Nomura, Yasunori; Okui, Takemichi; Oliver, Steven J.

2003-02-25

Explicit supersymmetry breaking is studied in higher dimensional theories by having boundaries respect only a subgroup of the bulk symmetry. If the boundary symmetry is the maximal subgroup allowed by the boundary conditions imposed on the fields, then the symmetry can be consistently gauged; otherwise gauging leads to an inconsistent theory. In a warped fifth dimension, an explicit breaking of all bulk supersymmetries by the boundaries is found to be inconsistent with gauging; unlike the case of flat 5D, complete supersymmetry breaking by boundary conditions is not consistent with supergravity. Despite this result, the low energy effective theory resulting from boundary supersymmetry breaking becomes consistent in the limit where gravity decouples, and such models are explored in the hope that some way of successfully incorporating gravity can be found. A warped constrained standard model leads to a theory with one Higgs boson with mass expected close to the experimental limit. A unified theory in a warped fifth dimension is studied with boundary breaking of both SU(5) gauge symmetry and supersymmetry. The usual supersymmetric predictionfor gauge coupling unification holds even though the TeV spectrum is quite unlike the MSSM. Such a theory may unify matter and Higgs in the same SU(5) hypermultiplet.

Introduction to symmetry-breaking phenomena in physics

CERN Multimedia

CERN. Geneva. Audiovisual Unit

2001-01-01

The notion of broken symmetries started slowly to emerge in the 19th century. The early studies of Pasteur on the parity asymmetry of life, the studies of Curie on piezoelectricity and on the symmetries of effects versus the symmetry of causes ( which clearly excluded spontaneous symmetry breaking), are important historical landmarks. However the possibility of spontaneous symmetry breaking within the usual principles of statistical mechanics, waited for the work of Peierls and Onsager. The whole theory of phase transitions and critical phenomena, as well as the construction of field theoretic models as long distance limit of yet unknown physics, relies nowadays on the concept of criticality associated to spontaneous symmetry breaking. The phenomena of Goldstone bosons, of Meissner-Higgs effects, are central to the theory of condensed matter as well as to particle physics. In cosmology as well, the various inflationary scenarios begin similarly with this same concept. The three lectures will provide a simple ...

U(1) mediation of flux supersymmetry breaking

Science.gov (United States)

Grimm, Thomas W.; Klemm, Albrecht

2008-10-01

We study the mediation of supersymmetry breaking triggered by background fluxes in Type II string compactifications with Script N = 1 supersymmetry. The mediation arises due to an U(1) vector multiplet coupling to both a hidden supersymmetry breaking flux sector and a visible D-brane sector. The required internal manifolds can be constructed by non-Kähler resolutions of singular Calabi-Yau manifolds. The effective action encoding the U(1) coupling is then determined in terms of the global topological properties of the internal space. We investigate suitable local geometries for the hidden and visible sector in detail. This includes a systematic study of orientifold symmetries of del Pezzo surfaces realized in compact geometries after geometric transition. We construct compact examples admitting the key properties to realize flux supersymmetry breaking and U(1) mediation. Their toric realization allows us to analyze the geometry of curve classes and confirm the topological connection between the hidden and visible sector.

U(1) mediation of flux supersymmetry breaking

International Nuclear Information System (INIS)

Grimm, Thomas W.; Klemm, Albrecht

2008-01-01

We study the mediation of supersymmetry breaking triggered by background fluxes in Type II string compactifications with N = 1 supersymmetry. The mediation arises due to an U(1) vector multiplet coupling to both a hidden supersymmetry breaking flux sector and a visible D-brane sector. The required internal manifolds can be constructed by non-Kaehler resolutions of singular Calabi-Yau manifolds. The effective action encoding the U(1) coupling is then determined in terms of the global topological properties of the internal space. We investigate suitable local geometries for the hidden and visible sector in detail. This includes a systematic study of orientifold symmetries of del Pezzo surfaces realized in compact geometries after geometric transition. We construct compact examples admitting the key properties to realize flux supersymmetry breaking and U(1) mediation. Their toric realization allows us to analyze the geometry of curve classes and confirm the topological connection between the hidden and visible sector.

Secretory pathway Ca2+ -ATPases promote in vitro microcalcifications in breast cancer cells.

Science.gov (United States)

Dang, Donna; Prasad, Hari; Rao, Rajini

2017-11-01

Calcification of the breast is often an outward manifestation of underlying molecular changes that drive carcinogenesis. Up to 50% of all non-palpable breast tumors and 90% of ductal carcinoma in situ present with radiographically dense mineralization in mammographic scans. However, surprisingly little is known about the molecular pathways that lead to microcalcifications in the breast. Here, we report on a rapid and quantitative in vitro assay to monitor microcalcifications in breast cancer cell lines, including MCF7, MDA-MB-231, and Hs578T. We show that the Secretory Pathway Ca 2+ -ATPases SPCA1 and SPCA2 are strongly induced under osteogenic conditions that elicit microcalcifications. SPCA gene expression is significantly elevated in breast cancer subtypes that are associated with microcalcifications. Ectopic expression of SPCA genes drives microcalcifications and is dependent on pumping activity. Conversely, knockdown of SPCA expression significantly attenuates formation of microcalcifications. We propose that high levels of SPCA pumps may initiate mineralization in the secretory pathway by elevating luminal Ca 2+ . Our new findings offer mechanistic insight and functional implications on a widely observed, yet poorly understood radiographic signature of breast cancer. © 2017 Wiley Periodicals, Inc.

An inverse switch in DNA base excision and strand break repair contributes to melphalan resistance in multiple myeloma cells.

Directory of Open Access Journals (Sweden)

Mirta M L Sousa

Full Text Available Alterations in checkpoint and DNA repair pathways may provide adaptive mechanisms contributing to acquired drug resistance. Here, we investigated the levels of proteins mediating DNA damage signaling and -repair in RPMI8226 multiple myeloma cells and its Melphalan-resistant derivative 8226-LR5. We observed markedly reduced steady-state levels of DNA glycosylases UNG2, NEIL1 and MPG in the resistant cells and cross-resistance to agents inducing their respective DNA base lesions. Conversely, repair of alkali-labile sites was apparently enhanced in the resistant cells, as substantiated by alkaline comet assay, autoribosylation of PARP-1, and increased sensitivity to PARP-1 inhibition by 4-AN or KU58684. Reduced base-excision and enhanced single-strand break repair would both contribute to the observed reduction in genomic alkali-labile sites, which could jeopardize productive processing of the more cytotoxic Melphalan-induced interstrand DNA crosslinks (ICLs. Furthermore, we found a marked upregulation of proteins in the non-homologous end-joining (NHEJ pathway of double-strand break (DSB repair, likely contributing to the observed increase in DSB repair kinetics in the resistant cells. Finally, we observed apparent upregulation of ATR-signaling and downregulation of ATM-signaling in the resistant cells. This was accompanied by markedly increased sensitivity towards Melphalan in the presence of ATR-, DNA-PK, or CHK1/2 inhibitors whereas no sensitizing effect was observed subsequent to ATM inhibition, suggesting that replication blocking lesions are primary triggers of the DNA damage response in the Melphalan resistant cells. In conclusion, Melphalan resistance is apparently contributed by modulation of the DNA damage response at multiple levels, including downregulation of specific repair pathways to avoid repair intermediates that could impair efficient processing of cytotoxic ICLs and ICL-induced DSBs. This study has revealed several novel

Chiral symmetry breaking and the pion quark structure

International Nuclear Information System (INIS)

Bernard, V.

1986-01-01

The mechanism of dynamical breaking of chiral symmetry in hadronic matter is first studied in the framework of the Nambu and Jona-Lasinio model on one hand and its generalisation to finite hadron size on the other hand. The analysis uses a variational procedure modelled after the BCS superconductor. Our study indicates for example, a great sensitivity of various quantities characterizing the breaking of symmetry to the shape of the interaction. Also the mechanism of breaking of chiral symmetry is essentially related to the mechanism of confinement. When a symmetry is spontaneously broken, there exists a Goldstone particle of zero mass. This is true in our model. This particle, the pion, is obtained as solution of a Bethe Salpeter equation for a qantiq bound state. This enables us to establish a connection between the pion as a Goldstone boson related to spontaneous symmetry breaking and the quark-antiquark structure of the pion. The finite mass of the physical pion is obtained with non zero current quark mass. Various properties of this particle are then studied in the RPA formalism. One important point of our model is the highly collective character of the pion. 85 refs [fr

More efficient repair of DNA double-strand breaks in skeletal muscle stem cells compared to their committed progeny

Directory of Open Access Journals (Sweden)

Leyla Vahidi Ferdousi

2014-11-01

Full Text Available The loss of genome integrity in adult stem cells results in accelerated tissue aging and is possibly cancerogenic. Adult stem cells in different tissues appear to react robustly to DNA damage. We report that adult skeletal stem (satellite cells do not primarily respond to radiation-induced DNA double-strand breaks (DSBs via differentiation and exhibit less apoptosis compared to other myogenic cells. Satellite cells repair these DNA lesions more efficiently than their committed progeny. Importantly, non-proliferating satellite cells and post-mitotic nuclei in the fiber exhibit dramatically distinct repair efficiencies. Altogether, reduction of the repair capacity appears to be more a function of differentiation than of the proliferation status of the muscle cell. Notably, satellite cells retain a high efficiency of DSB repair also when isolated from the natural niche. Finally, we show that repair of DSB substrates is not only very efficient but, surprisingly, also very accurate in satellite cells and that accurate repair depends on the key non-homologous end-joining factor DNA-PKcs.

More efficient repair of DNA double-strand breaks in skeletal muscle stem cells compared to their committed progeny.

Science.gov (United States)

Vahidi Ferdousi, Leyla; Rocheteau, Pierre; Chayot, Romain; Montagne, Benjamin; Chaker, Zayna; Flamant, Patricia; Tajbakhsh, Shahragim; Ricchetti, Miria

2014-11-01

The loss of genome integrity in adult stem cells results in accelerated tissue aging and is possibly cancerogenic. Adult stem cells in different tissues appear to react robustly to DNA damage. We report that adult skeletal stem (satellite) cells do not primarily respond to radiation-induced DNA double-strand breaks (DSBs) via differentiation and exhibit less apoptosis compared to other myogenic cells. Satellite cells repair these DNA lesions more efficiently than their committed progeny. Importantly, non-proliferating satellite cells and post-mitotic nuclei in the fiber exhibit dramatically distinct repair efficiencies. Altogether, reduction of the repair capacity appears to be more a function of differentiation than of the proliferation status of the muscle cell. Notably, satellite cells retain a high efficiency of DSB repair also when isolated from the natural niche. Finally, we show that repair of DSB substrates is not only very efficient but, surprisingly, also very accurate in satellite cells and that accurate repair depends on the key non-homologous end-joining factor DNA-PKcs. Copyright © 2014. Published by Elsevier B.V.

An automatic system for elaboration of chip breaking diagrams

DEFF Research Database (Denmark)

Andreasen, Jan Lasson; De Chiffre, Leonardo

1998-01-01

A laboratory system for fully automatic elaboration of chip breaking diagrams has been developed and tested. The system is based on automatic chip breaking detection by frequency analysis of cutting forces in connection with programming of a CNC-lathe to scan different feeds, speeds and cutting...

Breaking cover: neural responses to slow and fast camouflage-breaking motion.

Science.gov (United States)

Yin, Jiapeng; Gong, Hongliang; An, Xu; Chen, Zheyuan; Lu, Yiliang; Andolina, Ian M; McLoughlin, Niall; Wang, Wei

2015-08-22

Primates need to detect and recognize camouflaged animals in natural environments. Camouflage-breaking movements are often the only visual cue available to accomplish this. Specifically, sudden movements are often detected before full recognition of the camouflaged animal is made, suggesting that initial processing of motion precedes the recognition of motion-defined contours or shapes. What are the neuronal mechanisms underlying this initial processing of camouflaged motion in the primate visual brain? We investigated this question using intrinsic-signal optical imaging of macaque V1, V2 and V4, along with computer simulations of the neural population responses. We found that camouflaged motion at low speed was processed as a direction signal by both direction- and orientation-selective neurons, whereas at high-speed camouflaged motion was encoded as a motion-streak signal primarily by orientation-selective neurons. No population responses were found to be invariant to the camouflage contours. These results suggest that the initial processing of camouflaged motion at low and high speeds is encoded as direction and motion-streak signals in primate early visual cortices. These processes are consistent with a spatio-temporal filter mechanism that provides for fast processing of motion signals, prior to full recognition of camouflage-breaking animals. © 2015 The Authors.

Daily micro-breaks and job performance: General work engagement as a cross-level moderator.

Science.gov (United States)

Kim, Sooyeol; Park, YoungAh; Headrick, Lucille

2018-03-29

Despite the growing research on work recovery and its well-being outcomes, surprisingly little attention has been paid to at-work recovery and its job performance outcomes. The current study extends the work recovery literature by examining day-level relationships between prototypical microbreaks and job performance as mediated by state positive affect. Furthermore, general work engagement is tested as a cross-level moderator weakening the indirect effects of microbreaks on job performance via positive affect. Using multisource experience sampling method, the authors collected two daily surveys from 71 call center employees and obtained objective records of daily sales performance for two consecutive weeks (n = 632). Multilevel path analysis results showed that relaxation, socialization, and cognitive microbreaks were related to increased positive affect at work which, in turn, predicted greater sales performance. However, breaks for nutrition-intake (having snacks and drinks) did not show significant effects. Importantly, microbreaks had significant indirect effects on job performance via positive affect only for workers who had lower general work engagement, whereas the indirect effects did not exist for workers who had higher general work engagement. Furthermore, Bayesian multilevel analyses confirmed the results. Theoretical and practical implications, limitations, and future research directions are discussed. (PsycINFO Database Record (c) 2018 APA, all rights reserved).

Mass generation and chiral symmetry breaking by pseudoparticles

International Nuclear Information System (INIS)

Hietarinta, J.; Palmer, W.F.; Pinsky, S.S.

1978-01-01

Massless QCD is studied with regard to mass generation and chiral SU(N/sub f/) symmetry breaking from pseudoparticle effects. While mass is generated when there is only one massless quark, and chiral U(1) is always broken, no rigorous indication of the breaking of chiral SU(N/sub f/) and mass generation is seen when there are more than one massless quarks in the original theory

A geometric hierarchy for the supersymmetry breaking scale

International Nuclear Information System (INIS)

Oakley, C.; Ross, G.G.

1983-01-01

F type supersymmetry breaking through O'Raifeartaigh-Fayet (Nucl. Phys.; B96:331 (1975) and Phys. Lett.; 580:67 (1975)) potentials is considered. It is shown how a class of models gives rise to a supersymmetry breaking scale reduced relative to the fundamental scale M of the potential by powers of (M/Msub(Planck)). The role of R invariance in such potentials is discussed. (author)

Concepts of electroweak symmetry breaking and Higgs physics

International Nuclear Information System (INIS)

Gomez-Bock, M.; Zerwas, P.M.; RWTH Aachen; Univ. Paris- Sud, Orsay

2007-12-01

We present an introduction to the basic concepts of electroweak symmetry breaking and Higgs physics within the Standard Model and its supersymmetric extensions. A brief overview will also be given on alternative mechanisms of electroweak symmetry breaking. In addition to the theoretical basis, the present experimental status of Higgs physics and prospects at the Tevatron, the LHC and e + e - linear colliders are discussed. (orig.)

Concepts of electroweak symmetry breaking and Higgs physics

Energy Technology Data Exchange (ETDEWEB)

Gomez-Bock, M. [Benemerita Univ., Puebla (Mexico). Inst. de Fisica; Mondragon, M. [Universidad Nacional Autonoma de Mexico, Mexico City (Mexico). Inst. de Fisica; Muehlleitner, M. [Laboratoire d' Annecy-Le-Vieux de Physique Theorique, 74 (France)]|[CERN - European Organization for Nuclear Research, Geneva (Switzerland). Theory Div.; Spira, M. [Paul Scherrer Inst. (PSI), Villigen (Switzerland); Zerwas, P.M. [Deutsches Elektronen-Synchrotron (DESY), Hamburg (Germany)]|[RWTH Aachen (Germany). Inst. Theor. Physik E]|[Univ. Paris- Sud, Orsay (France). Laboratoire de Physique Theorique

2007-12-15

We present an introduction to the basic concepts of electroweak symmetry breaking and Higgs physics within the Standard Model and its supersymmetric extensions. A brief overview will also be given on alternative mechanisms of electroweak symmetry breaking. In addition to the theoretical basis, the present experimental status of Higgs physics and prospects at the Tevatron, the LHC and e{sup +}e{sup -} linear colliders are discussed. (orig.)

Temperature renormalization group approach to spontaneous symmetry breaking

International Nuclear Information System (INIS)

Manesis, E.; Sakakibara, S.

1985-01-01

We apply renormalization group equations that describe the finite-temperature behavior of Green's functions to investigate thermal properties of spontaneous symmetry breaking. Specifically, in the O(N).O(N) symmetric model we study the change of symmetry breaking patterns with temperature, and show that there always exists the unbroken symmetry phase at high temperature, modifying the naive result of leading order in finite-temperature perturbation theory. (orig.)

Defining Nitrogen Kinetics for Air Break in Prebreathe

Science.gov (United States)

Conkin, Johnny

2009-01-01

Actual tissue nitrogen (N2) kinetics are complex; the uptake and elimination is often approximated with a single half-time compartment in statistical descriptions of denitrogenation [prebreathe (PB)] protocols. Air breaks during PB complicate N2 kinetics. A comparison of symmetrical versus asymmetrical N2 kinetics was performed using the time to onset of hypobaric decompression sickness (DCS) as a surrogate for actual venous N2 tension. Published results of 12 tests involving 179 hypobaric exposures in altitude chambers after PB, with and without air breaks, provide the complex protocols from which to model N2 kinetics. DCS survival time for combined control and air breaks were described with an accelerated log logistic model where N2 uptake and elimination before, during, and after the air break was computed with a simple exponential function or a function that changed half-time depending on ambient N2 partial pressure. P1N2-P2 = delta P defined DCS dose for each altitude exposure, where P2 was the test altitude and P1N2 was computed N2 pressure at the beginning of the altitude exposure. The log likelihood (LL) without DCS dose (null model) was -155.6, and improved (best-fit) to -97.2 when dose was defined with a 240 min half-time for both N2 elimination and uptake during the PB. The description of DCS survival time was less precise with asymmetrical N2 kinetics, for example, LL was -98.9 with 240 min half-time elimination and 120 min half-time uptake. The statistical regression described survival time mechanistically linked to symmetrical N2 kinetics during PBs that also included air breaks. The results are data-specific, and additional data may change the conclusion. The regression is useful to compute additional PB time to compensate for an air break in PB within the narrow range of tested conditions.

EXCHANGE RATE PASS-THROUGH, IMPORT PRICES AND INFLATION UNDER STRUCTURAL BREAKS

Directory of Open Access Journals (Sweden)

Arintoko Arintoko

2011-09-01

Full Text Available This research estimates the exchange rate pass-through (ERPT into import prices by applying an extension of the basic model of ERPT on Indonesia. It estimates models of cointegration and error-correction mechanism (ECM, with and without structural breaks. It uses the techniques of Zivot-Andrews and of Gregory-Hansen to test for structural breaks and cointegration with the structural breaks, respectively. The results show that with the control variables, inflation affects import prices and lower the pass-through for short term, in a condition of free floating exchange rate. In the short term, with the inclusion of structural breaks, significant inflation affects import prices and lowers the ERPT coefficient.  Keywords:    Exchange rate pass-through, inflation, structural breaks, cointegration, error-correction mechanismJEL classification numbers: C22, C32, E31, F41

Break up of light ions in the nuclear and Coulomb field of nuclei

International Nuclear Information System (INIS)

Srivastava, D.K.

1985-12-01

The break up of light ion projectiles in the nuclear and Coulomb field of nuclei is considered. Current theoretical concepts for describing break up processes and their theoretical features are discussed. An alternative method, based on a prior-interaction DWBA, is introduced for the calculation of the direct elastic break up cross sections. This method reveals the role of the internal momentum distribution of the break up fragments and includes corresponding 'finite range' effects. The Coulomb break up of 6 Li is studied on the basis of a quasi-sequential break up approach (following Rybicki and Austern) and results are obtained for very low relative energies of the emerging α-particles and deuteron fragments. The astrophysical interest in these cross sections is noted. A view on further extensions of the break up theory is given. (orig.) [de

The impacts of multiple rest-break periods on commercial truck driver's crash risk.

Science.gov (United States)

Chen, Chen; Xie, Yuanchang

2014-02-01

Driver fatigue has been a major contributing factor to fatal commercial truck crashes, which accounted for about 10% of all fatal motor vehicle crashes that happened between 2009 and 2011. Commercial truck drivers' safety performance can deteriorate easily due to fatigue caused by long driving hours and irregular working schedules. To ensure safety, truck drivers often use off-duty time and short rest breaks during a trip to recover from fatigue. This study thoroughly investigates the impacts of off-duty time prior to a trip and short rest breaks on commercial truck safety by using Cox proportional hazards model and Andersen-Gill model. It is found that increasing total rest-break duration can consistently reduce fatigue-related crash risk. Similarly, taking more rest breaks can help to reduce crash risk. The results suggest that two rest breaks are generally considered enough for a 10-hour trip, as three or more rest breaks may not further reduce crash risk substantially. Also, the length of each rest break does not need to be very long and 30min is usually adequate. In addition, this study investigates the safety impacts of when to take rest breaks. It is found that taking rest breaks too soon after a trip starts will cause the rest breaks to be less effective. The findings of this research can help policy makers and trucking companies better understand the impacts of multiple rest-break periods and develop more effective rules to improve the safety of truck drivers. Copyright © 2014 Elsevier Ltd and National Safety Council. All rights reserved.

Post accidental small breaks analysis

International Nuclear Information System (INIS)

Depond, G.; Gandrille, J.

1980-04-01

EDF ordered to FRAMATOME by 1977 to complete post accidental long term studies on 'First Contrat-Programme' reactors, in order to demonstrate the safety criteria long term compliance, to get information on NSSS behaviour and to improve the post accidental procedures. Convenient analytical models were needed and EDF and FRAMATOME respectively developped the AXEL and FRARELAP codes. The main results of these studies is that for the smallest breaks, it is possible to manually undertake cooling and pressure reducing actions by dumping the steam generators secondary side in order to meet the RHR operating specifications and perform long term cooling through this system. A specific small breaks procedure was written on this basis. The EDF and FRAMATOME codes are continuously improved; the results of a French set of separate effects experiments will be incorporated as well as integral system verification

Gravitino dark matter in R-parity breaking vacua

International Nuclear Information System (INIS)

Buchmueller, W.; Covi, L.; Ibarra, A.; Hamaguchi, K.; Yanagida, T.T.

2007-02-01

We show that in the case of small R-parity and lepton number breaking couplings, primordial nucleosynthesis, thermal leptogenesis and gravitino dark matter are naturally consistent for gravitino masses m 3/2 >or similar 5 GeV. We present a model where R-parity breaking is tied to B-L breaking, which predicts the needed small couplings. The metastable next-to-lightest superparticle has a decay length that is typically larger than a few centimeters, with characteristic signatures at the LHC. The photon flux produced by relic gravitino decays may be part of the apparent excess in the extragalactic diffuse gamma-ray flux obtained from the EGRET data for a gravitino mass m 3/2 ∝10 GeV. In this case, a clear signal can be expected from GLAST in the near future. (orig.)

Break model comparison in different RELAP5 versions

International Nuclear Information System (INIS)

Parzer, I.

2003-01-01

The presented work focuses on the break flow prediction in RELAP5/MOD3 code, which is crucial to predict core uncovering and heatup during the Small Break Loss-of-Coolant Accidents (SB LOCA). The code prediction has been compared to the IAEA-SPE-4 experiments conducted on the PMK-2 integral test facilities in Hungary. The simulations have been performed with MOD3.2.2 Beta, MOD3.2.2 Gamma, MOD3.3 Beta and MOD3.3 frozen code version. In the present work we have compared the Ransom-Trapp and Henry-Fauske break model predictions. Additionally, both model predictions have been compared to itself, when used as the main modeling tool or when used as another code option, as so-called 'secret developmental options' on input card no.1. (author)

Prediction of LOCA Break Size Using CFNN

Energy Technology Data Exchange (ETDEWEB)

Choi, Geon Pil; Yoo, Kwae Hwan; Back, Ju Hyun; Kim, Dong Yeong; Na, Man Gyun [Chosun University Gwangju (Korea, Republic of)

2016-05-15

The NPPs have the emergency core cooling system (ECCS) such as a safety injection system. The ECCS may not function properly in case of the small break size due to a slight change of pressure in the pipe. If the coolant is not supplied by ECCS, the reactor core will melt. Therefore, the meltdown of reactor core have to be prevented by appropriate accident management through the prediction of LOCA break size in advance. This study presents the prediction of LOCA break size using cascaded fuzzy neural network (CFNN). The CFNN model repeatedly applies FNN modules that are serially connected. The CFNN model is a data-based method that requires data for its development and verification. The data were obtained by numerically simulating severe accident scenarios of the optimized power reactor (OPR1000) using MAAP code, because real severe accident data cannot be obtained from actual NPP accidents. The CFNN model has been designed to rapidly predict the LOCA break size in LOCA situations. The CFNN model was trained by using the training data set and checked by using test data set. These data sets were obtained using MAAP code for OPR1000 reactor. The performance results of the CFNN model show that the RMS error decreases as the stage number of the CFNN model increases. In addition, the performance result of the CFNN model presents that the RMS error level is below 4%.

′BREAKS′ protocol for breaking bad news

Directory of Open Access Journals (Sweden)

Vijayakumar Narayanan

2010-01-01

Full Text Available Information that drastically alters the life world of the patient is termed as bad news. Conveying bad news is a skilled communication, and not at all easy. The amount of truth to be disclosed is subjective. A properly structured and well-orchestrated communication has a positive therapeutic effect. This is a process of negotiation between patient and physician, but physicians often find it difficult due to many reasons. They feel incompetent and are afraid of unleashing a negative reaction from the patient or their relatives. The physician is reminded of his or her own vulnerability to terminal illness, and find themselves powerless over emotional distress. Lack of sufficient training in breaking bad news is a handicap to most physicians and health care workers. Adherence to the principles of client-centered counseling is helpful in attaining this skill. Fundamental insight of the patient is exploited and the bad news is delivered in a structured manner, because the patient is the one who knows what is hurting him most and he is the one who knows how to move forward. Six-step SPIKES protocol is widely used for breaking bad news. In this paper, we put forward another six-step protocol, the BREAKS protocol as a systematic and easy communication strategy for breaking bad news. Development of competence in dealing with difficult situations has positive therapeutic outcome and is a professionally satisfying one.

‘BREAKS’ Protocol for Breaking Bad News

Science.gov (United States)

Narayanan, Vijayakumar; Bista, Bibek; Koshy, Cheriyan

2010-01-01

Information that drastically alters the life world of the patient is termed as bad news. Conveying bad news is a skilled communication, and not at all easy. The amount of truth to be disclosed is subjective. A properly structured and well-orchestrated communication has a positive therapeutic effect. This is a process of negotiation between patient and physician, but physicians often find it difficult due to many reasons. They feel incompetent and are afraid of unleashing a negative reaction from the patient or their relatives. The physician is reminded of his or her own vulnerability to terminal illness, and find themselves powerless over emotional distress. Lack of sufficient training in breaking bad news is a handicap to most physicians and health care workers. Adherence to the principles of client-centered counseling is helpful in attaining this skill. Fundamental insight of the patient is exploited and the bad news is delivered in a structured manner, because the patient is the one who knows what is hurting him most and he is the one who knows how to move forward. Six-step SPIKES protocol is widely used for breaking bad news. In this paper, we put forward another six-step protocol, the BREAKS protocol as a systematic and easy communication strategy for breaking bad news. Development of competence in dealing with difficult situations has positive therapeutic outcome and is a professionally satisfying one. PMID:21811349

On the character of scale symmetry breaking in gauge theories

International Nuclear Information System (INIS)

Gusijnin, V.P.; Kushnir, V.A.; Miransky, V.A.

1988-01-01

The problem of scale symmetry breaking in gauge theories is discussed. It is shown that the phenomenon of spontaneous breaking of scale symmetry in gauge theories is incompatible with the PCAAC dynamics. 12 refs

CSNI specialist meeting on leak-before-break in nuclear reactor piping: proceedings

Energy Technology Data Exchange (ETDEWEB)

1984-08-01

On September 1 and 2, 1983, the CSNI subcommittee on primary system integrity held a special meeting in Monterey, California, on the subject of leak-before-break in nuclear reactor piping systems. The purpose of the meeting was to provide an international forum for the exchange of ideas, positions, and research results; to identify areas requiring additional research and development; and to determine the general attitude toward acceptance of the leak-before-break concept. The importance of the leak-before-break issue was evidenced by excellent attendance at the meeting and through active participation by the meeting attendees. Approximately 125 people representing fifteen different nations attended the meeting. The meeting was divided into four technical sessions addressing the following areas: Application of Piping Fracture Mechanics to Leak-Before Break, Leak Rate and Leak Detection, Leak-Before-Break Studies, Methods and Results, Current and Proposed Positions on Leak-Before-Break.

CSNI specialist meeting on leak-before-break in nuclear reactor piping: proceedings

International Nuclear Information System (INIS)

1984-08-01

On September 1 and 2, 1983, the CSNI subcommittee on primary system integrity held a special meeting in Monterey, California, on the subject of leak-before-break in nuclear reactor piping systems. The purpose of the meeting was to provide an international forum for the exchange of ideas, positions, and research results; to identify areas requiring additional research and development; and to determine the general attitude toward acceptance of the leak-before-break concept. The importance of the leak-before-break issue was evidenced by excellent attendance at the meeting and through active participation by the meeting attendees. Approximately 125 people representing fifteen different nations attended the meeting. The meeting was divided into four technical sessions addressing the following areas: Application of Piping Fracture Mechanics to Leak-Before Break, Leak Rate and Leak Detection, Leak-Before-Break Studies, Methods and Results, Current and Proposed Positions on Leak-Before-Break

The Impact of a Surprise Dividend Increase on a Stocks Performance : the Analysis of Companies Listed on the Warsaw Stock Exchange

Directory of Open Access Journals (Sweden)

Tomasz Słoński

2012-01-01

Full Text Available The reaction of marginal investors to the announcement of a surprise dividend increase has been measured. Although field research is performed on companies listed on the Warsaw Stock Exchange, the paper has important theoretical implications. Valuation theory gives many clues for the interpretation of changes in dividends. At the start of the literature review, the assumption of the irrelevance of dividends (to investment decisions is described. This assumption is the basis for up-to-date valuation procedures leading to fundamental and fair market valuation of equity (shares. The paper is designed to verify whether the market value of stock is immune to the surprise announcement of a dividend increase. This study of the effect of a surprise dividend increase gives the chance to partially isolate such an event from dividend changes based on long-term expectations. The result of the research explicitly shows that a surprise dividend increase is on average welcomed by investors (an average abnormal return of 2.24% with an associated p-value of 0.001. Abnormal returns are realized by investors when there is a surprise increase in a dividend payout. The subsample of relatively high increases in a dividend payout enables investors to gain a 3.2% return on average. The results show that valuation models should be revised to take into account a possible impact of dividend changes on investors behavior. (original abstract

RG analysis of magnetic catalysis in dynamical symmetry breaking

International Nuclear Information System (INIS)

Hong, Deog Ki; Kim, Youngman

1996-01-01

We perform the renormalization group analysis on the dynamical symmetry breaking under strong external magnetic field, studied recently by Gusynin, Miransky and Shovkovy. We find that any attractive four-Fermi interaction becomes strong in the low energy, thus leading to dynamical symmetry breaking. When the four-Fermi interaction is absent, the β-function for the electromagnetic coupling vanishes in the leading order in 1/N. By solving the Schwinger-Dyson equation for the fermion propagator, we show that in 1/N expansion, for any electromagnetic coupling, dynamical symmetry breaking occurs due to the presence of Landau energy gap by the external magnetic field. 5 refs

NPP Krsko Containment Response Following Main Steam Line Break

International Nuclear Information System (INIS)

Spalj, S.; Grgic, D.; Cavlina, N.

2000-01-01

This paper presents the calculation of thermohydraulic environmental parameters (pressure and temperature) inside containment of Krsko NPP after postulated Main Steam Line Break (MSLB) accident. This analysis was done as a part of the ambient parameters specification in the frame of the NPP Krsko Equipment Qualification (EQ) project. The RELAP5/mod2 computer code was used for the determination of MSLB mass and energy release and computer code GOTHIC was used to calculate pressure and temperature profiles inside NPP Krsko containment. The analysis was performed for spectrum of break sizes to account for possible steam superheating during accidents with smaller break sizes. (author)

Local models of Gauge Mediated Supersymmetry Breaking in String Theory

CERN Document Server

Garcia-Etxebarria, I; Uranga, Angel M; Garcia-Etxebarria, Inaki; Saad, Fouad; Uranga, Angel M.

2006-01-01

We describe local Calabi-Yau geometries with two isolated singularities at which systems of D3- and D7-branes are located, leading to chiral sectors corresponding to a semi-realistic visible sector and a hidden sector with dynamical supersymmetry breaking. We provide explicit models with a 3-family MSSM-like visible sector, and a hidden sector breaking supersymmetry at a meta-stable minimum. For singularities separated by a distance smaller than the string scale, this construction leads to a simple realization of gauge mediated supersymmetry breaking in string theory. The models are simple enough to allow the explicit computation of the massive messenger sector, using dimer techniques for branes at singularities. The local character of the configurations makes manifest the UV insensitivity of the supersymmetry breaking mediation.

Dealing with unexpected events on the flight deck : A conceptual model of startle and surprise

NARCIS (Netherlands)

Landman, H.M.; Groen, E.L.; Paassen, M.M. van; Bronkhorst, A.W.; Mulder, M.

2017-01-01

Objective: A conceptual model is proposed in order to explain pilot performance in surprising and startling situations. Background: Today’s debate around loss of control following in-flight events and the implementation of upset prevention and recovery training has highlighted the importance of

Gauge-mediated supersymmetry breaking in string compactifications

International Nuclear Information System (INIS)

Diaconescu, Duiliu-Emanuel; Florea, Bogdan; Kachru, Shamit; Svrcek, Peter

2006-01-01

We provide string theory examples where a toy model of a SUSY GUT or the MSSM is embedded in a compactification along with a gauge sector which dynamically breaks supersymmetry. We argue that by changing microscopic details of the model (such as precise choices of flux), one can arrange for the dominant mediation mechanism transmitting SUSY breaking to the Standard Model to be either gravity mediation or gauge mediation. Systematic improvement of such examples may lead to top-down models incorporating a solution to the SUSY flavor problem

Detecting Structural Breaks using Hidden Markov Models

DEFF Research Database (Denmark)

Ntantamis, Christos

Testing for structural breaks and identifying their location is essential for econometric modeling. In this paper, a Hidden Markov Model (HMM) approach is used in order to perform these tasks. Breaks are defined as the data points where the underlying Markov Chain switches from one state to another....... The estimation of the HMM is conducted using a variant of the Iterative Conditional Expectation-Generalized Mixture (ICE-GEMI) algorithm proposed by Delignon et al. (1997), that permits analysis of the conditional distributions of economic data and allows for different functional forms across regimes...

Turbulence dissipation under breaking waves and bores in a natural surf zone

NARCIS (Netherlands)

Grasso, F.R.; Castelle, B.; Ruessink, B.G.

2012-01-01

Wave breaking is the primary driver of beach erosion, injecting breaking-induced turbulence at the sea surface and diffusing bed boundary layer turbulence at the sea bed. The limited understanding of the vertical turbulence structure under natural breaking waves, and hence sand entrainment, is one

Symmetry breaking on density in escaping ants: experiment and alarm pheromone model.

Directory of Open Access Journals (Sweden)

Geng Li

Full Text Available The symmetry breaking observed in nature is fascinating. This symmetry breaking is observed in both human crowds and ant colonies. In such cases, when escaping from a closed space with two symmetrically located exits, one exit is used more often than the other. Group size and density have been reported as having no significant impact on symmetry breaking, and the alignment rule has been used to model symmetry breaking. Density usually plays important roles in collective behavior. However, density is not well-studied in symmetry breaking, which forms the major basis of this paper. The experiment described in this paper on an ant colony displays an increase then decrease of symmetry breaking versus ant density. This result suggests that a Vicsek-like model with an alignment rule may not be the correct model for escaping ants. Based on biological facts that ants use pheromones to communicate, rather than seeing how other individuals move, we propose a simple yet effective alarm pheromone model. The model results agree well with the experimental outcomes. As a measure, this paper redefines symmetry breaking as the collective asymmetry by deducing the random fluctuations. This research indicates that ants deposit and respond to the alarm pheromone, and the accumulation of this biased information sharing leads to symmetry breaking, which suggests true fundamental rules of collective escape behavior in ants.

Processing load imposed by line breaks in English temporal wh-questions

Directory of Open Access Journals (Sweden)

Masako Hirotani

2016-10-01

Full Text Available Prosody plays an important role in online sentence processing both explicitly and implicitly. It has been shown that prosodically packaging together parts of a sentence that are interpreted together facilitates processing of the sentence. This applies not only to explicit prosody but also implicit prosody. The present work hypothesizes that a line break in a written text induces an implicit prosodic break, which, in turn, should result in a processing bias for interpreting English wh-questions. Two experiments – one self-paced reading study and one questionnaire study – are reported. Both supported the line break hypothesis mentioned above. The results of the self-paced reading experiment showed that unambiguous wh-questions were read faster when the location of line breaks (or frame breaks matched the scope of a wh-phrase (main or embedded clause than when they did not. The questionnaire tested sentences with an ambiguous wh-phrase, one that could attach either to the main or the embedded clause. These sentences were interpreted as attaching to the main clause more often than to the embedded clause when a line break appeared after the main verb, but not when it appeared after the embedded verb.