Video-based depression detection using local Curvelet binary patterns in pairwise orthogonal planes.
Pampouchidou, Anastasia; Marias, Kostas; Tsiknakis, Manolis; Simos, Panagiotis; Fan Yang; Lemaitre, Guillaume; Meriaudeau, Fabrice
2016-08-01
Depression is an increasingly prevalent mood disorder. This is the reason why the field of computer-based depression assessment has been gaining the attention of the research community during the past couple of years. The present work proposes two algorithms for depression detection, one Frame-based and the second Video-based, both employing Curvelet transform and Local Binary Patterns. The main advantage of these methods is that they have significantly lower computational requirements, as the extracted features are of very low dimensionality. This is achieved by modifying the previously proposed algorithm which considers Three-Orthogonal-Planes, to only Pairwise-Orthogonal-Planes. Performance of the algorithms was tested on the benchmark dataset provided by the Audio/Visual Emotion Challenge 2014, with the person-specific system achieving 97.6% classification accuracy, and the person-independed one yielding promising preliminary results of 74.5% accuracy. The paper concludes with open issues, proposed solutions, and future plans.
[Orthogonal Vector Projection Algorithm for Spectral Unmixing].
Song, Mei-ping; Xu, Xing-wei; Chang, Chein-I; An, Ju-bai; Yao, Li
2015-12-01
Spectrum unmixing is an important part of hyperspectral technologies, which is essential for material quantity analysis in hyperspectral imagery. Most linear unmixing algorithms require computations of matrix multiplication and matrix inversion or matrix determination. These are difficult for programming, especially hard for realization on hardware. At the same time, the computation costs of the algorithms increase significantly as the number of endmembers grows. Here, based on the traditional algorithm Orthogonal Subspace Projection, a new method called. Orthogonal Vector Projection is prompted using orthogonal principle. It simplifies this process by avoiding matrix multiplication and inversion. It firstly computes the final orthogonal vector via Gram-Schmidt process for each endmember spectrum. And then, these orthogonal vectors are used as projection vector for the pixel signature. The unconstrained abundance can be obtained directly by projecting the signature to the projection vectors, and computing the ratio of projected vector length and orthogonal vector length. Compared to the Orthogonal Subspace Projection and Least Squares Error algorithms, this method does not need matrix inversion, which is much computation costing and hard to implement on hardware. It just completes the orthogonalization process by repeated vector operations, easy for application on both parallel computation and hardware. The reasonability of the algorithm is proved by its relationship with Orthogonal Sub-space Projection and Least Squares Error algorithms. And its computational complexity is also compared with the other two algorithms', which is the lowest one. At last, the experimental results on synthetic image and real image are also provided, giving another evidence for effectiveness of the method.
Orthogonally Based Digital Content Management Applicable to Projects-bases
Directory of Open Access Journals (Sweden)
Daniel MILODIN
2009-01-01
Full Text Available There is defined the concept of digital content. The requirements of an efficient management of the digital content are established. There are listed the quality characteristics of digital content. Orthogonality indicators of digital content are built up. They are meant to measure the image, the sound as well as the text orthogonality as well. Projects-base concept is introduced. There is presented the model of structuring the content in order to maximize orthogonality via a convergent iterative process. The model is instantiated for the digital content of a projects-base. It is introduced the application used to test the model. The paper ends with conclusions.
COMPUTER GRAPHICAL REPRESENTATION, IN TREBLE ORTHOGONAL PROJECTION, OF A POINT
Directory of Open Access Journals (Sweden)
SLONOVSCHI Andrei
2017-05-01
Full Text Available In the stages of understanding and study, by students, of descriptive geometry, the treble orthogonal projection of a point, creates problems in the situations in that one or more descriptive coordinates are zero. Starting from these considerations the authors have created an original computer program which offers to the students the possibility to easily understanding of the way in which a point is represented, in draught, in the treble orthogonal projection whatever which are its values of the descriptive coordinates.
TEACHING BASIC ELEMENTS IN TECHNICAL DRAWING – ORTHOGONAL PROJECTIONS
Directory of Open Access Journals (Sweden)
CLINCIU Ramona
2017-05-01
Full Text Available The paper presents applications developed using AutoCAD and 3D Studio MAX programs. These applications are constructed such as to enable, gradually, the development of the spatial abilities of the students and, at the same time, to enable the understanding of the principles for the representation of the orthogonal projections of the parts, as well as for the construction of their axonometric projections.
A Comparative Study for Orthogonal Subspace Projection and Constrained Energy Minimization
National Research Council Canada - National Science Library
Du, Qian; Ren, Hsuan; Chang, Chein-I
2003-01-01
...: orthogonal subspace projection (OSP) and constrained energy minimization (CEM). It is shown that they are closely related and essentially equivalent provided that the noise is white with large SNR...
Supervised orthogonal discriminant subspace projects learning for face recognition.
Chen, Yu; Xu, Xiao-Hong
2014-02-01
In this paper, a new linear dimension reduction method called supervised orthogonal discriminant subspace projection (SODSP) is proposed, which addresses high-dimensionality of data and the small sample size problem. More specifically, given a set of data points in the ambient space, a novel weight matrix that describes the relationship between the data points is first built. And in order to model the manifold structure, the class information is incorporated into the weight matrix. Based on the novel weight matrix, the local scatter matrix as well as non-local scatter matrix is defined such that the neighborhood structure can be preserved. In order to enhance the recognition ability, we impose an orthogonal constraint into a graph-based maximum margin analysis, seeking to find a projection that maximizes the difference, rather than the ratio between the non-local scatter and the local scatter. In this way, SODSP naturally avoids the singularity problem. Further, we develop an efficient and stable algorithm for implementing SODSP, especially, on high-dimensional data set. Moreover, the theoretical analysis shows that LPP is a special instance of SODSP by imposing some constraints. Experiments on the ORL, Yale, Extended Yale face database B and FERET face database are performed to test and evaluate the proposed algorithm. The results demonstrate the effectiveness of SODSP. Copyright © 2013 Elsevier Ltd. All rights reserved.
Directory of Open Access Journals (Sweden)
Iman Yousefi
2015-01-01
Full Text Available This paper presents parameter estimation of Permanent Magnet Synchronous Motor (PMSM using a combinatorial algorithm. Nonlinear fourth-order space state model of PMSM is selected. This model is rewritten to the linear regression form without linearization. Noise is imposed to the system in order to provide a real condition, and then combinatorial Orthogonal Projection Algorithm and Recursive Least Squares (OPA&RLS method is applied in the linear regression form to the system. Results of this method are compared to the Orthogonal Projection Algorithm (OPA and Recursive Least Squares (RLS methods to validate the feasibility of the proposed method. Simulation results validate the efficacy of the proposed algorithm.
On the method of orthogonal projections in the theory of elasticity
Directory of Open Access Journals (Sweden)
Valerii V. Struzhanov
2017-07-01
Full Text Available The method of orthogonal projections applied to the task of determining the stresses in the elastic deformable bodies, which allowed us to relax the requirements to the smoothness of the functions defining external forces and to the components of the tensor of the initial strains, which cause the appearance of balanced self-stresses. Examples of the calculation of quench stresses in a circular cylinder and residual stresses after shrinkage of the binder in composite cylinders made by winding are given.
Brecht, Hans P.; Ivanov, Vassili; Dumani, Diego S.; Emelianov, Stanislav Y.; Anastasio, Mark A.; Ermilov, Sergey A.
2018-03-01
We have developed a preclinical 3D imaging instrument integrating photoacoustic tomography and fluorescence (PAFT) addressing known deficiencies in sensitivity and spatial resolution of the individual imaging components. PAFT is designed for simultaneous acquisition of photoacoustic and fluorescence orthogonal projections at each rotational position of a biological object, enabling direct registration of the two imaging modalities. Orthogonal photoacoustic projections are utilized to reconstruct large (21 cm3 ) volumes showing vascularized anatomical structures and regions of induced optical contrast with spatial resolution exceeding 100 µm. The major advantage of orthogonal fluorescence projections is significant reduction of background noise associated with transmitted or backscattered photons. The fluorescence imaging component of PAFT is used to boost detection sensitivity by providing low-resolution spatial constraint for the fluorescent biomarkers. PAFT performance characteristics were assessed by imaging optical and fluorescent contrast agents in tissue mimicking phantoms and in vivo. The proposed PAFT technology will enable functional and molecular volumetric imaging using fluorescent biomarkers, nanoparticles, and other photosensitive constructs mapped with high fidelity over robust anatomical structures, such as skin, central and peripheral vasculature, and internal organs.
Statistical physics of pairwise probability models
Directory of Open Access Journals (Sweden)
Yasser Roudi
2009-11-01
Full Text Available Statistical models for describing the probability distribution over the states of biological systems are commonly used for dimensional reduction. Among these models, pairwise models are very attractive in part because they can be fit using a reasonable amount of data: knowledge of the means and correlations between pairs of elements in the system is sufficient. Not surprisingly, then, using pairwise models for studying neural data has been the focus of many studies in recent years. In this paper, we describe how tools from statistical physics can be employed for studying and using pairwise models. We build on our previous work on the subject and study the relation between different methods for fitting these models and evaluating their quality. In particular, using data from simulated cortical networks we study how the quality of various approximate methods for inferring the parameters in a pairwise model depends on the time bin chosen for binning the data. We also study the effect of the size of the time bin on the model quality itself, again using simulated data. We show that using finer time bins increases the quality of the pairwise model. We offer new ways of deriving the expressions reported in our previous work for assessing the quality of pairwise models.
Orthogonal Projection-Based Harmonic Signal Removal for Operational Modal Analysis
DEFF Research Database (Denmark)
Gres, Szymon; Andersen, Palle; Hoen, C.
2019-01-01
A presence of a high amplitude periodic signals in the output responses from operating structures often pose a challenge for output-only system identification and, in case of health monitoring, damage detection/localization methods. This paper introduces a pre-processing approach that removes...... the harmonic part from the output signals directly in the time domain. The new method uses orthogonal projections of the harmonic realization of the signal onto the raw time series within the stochastic subspace framework. Proposed algorithm is tested on two experimental examples. First, an aluminum plate...... excited with both random white and periodic excitations. Second, a full-scale industrial case of a ferry excited by a random environmental load with harmonic interference from a rotating machinery on-board. In both cases the proposed method removes the harmonics from the structural responses while leaving...
International Nuclear Information System (INIS)
Kukulin, V.I.; Pomerantsev, V.N.
1976-01-01
Method of rearrangement of the Born series in scattering theory is proposed which uses the corthogonal projecting pseudopotentials (OPP) proposed recently. It is proved vigorously that the rearranged Born series will converge for all negative and small positive energy value seven in the presence of bound states. Method of correct introduction of scattering operators in orthogonal subspaces is displayed. Comparison of the OPP method with the projection technique developed by Feschbach is given. Physical applications of the method formulated are discussed
Pair-Wise Trajectory Management-Oceanic (PTM-O) . [Concept of Operations—Version 3.9
Jones, Kenneth M.
2014-01-01
This document describes the Pair-wise Trajectory Management-Oceanic (PTM-O) Concept of Operations (ConOps). Pair-wise Trajectory Management (PTM) is a concept that includes airborne and ground-based capabilities designed to enable and to benefit from, airborne pair-wise distance-monitoring capability. PTM includes the capabilities needed for the controller to issue a PTM clearance that resolves a conflict for a specific pair of aircraft. PTM avionics include the capabilities needed for the flight crew to manage their trajectory relative to specific designated aircraft. Pair-wise Trajectory Management PTM-Oceanic (PTM-O) is a regional specific application of the PTM concept. PTM is sponsored by the National Aeronautics and Space Administration (NASA) Concept and Technology Development Project (part of NASA's Airspace Systems Program). The goal of PTM is to use enhanced and distributed communications and surveillance along with airborne tools to permit reduced separation standards for given aircraft pairs, thereby increasing the capacity and efficiency of aircraft operations at a given altitude or volume of airspace.
Chen, Chao; Gao, Nan; Wang, Xiangjun; Zhang, Zonghua
2018-05-01
Three-dimensional (3D) shape measurement based on fringe pattern projection techniques has been commonly used in various fields. One of the remaining challenges in fringe pattern projection is that camera sensor saturation may occur if there is a large range of reflectivity variation across the surface that causes measurement errors. To overcome this problem, a novel fringe pattern projection method is proposed to avoid image saturation and maintain high-intensity modulation for measuring shiny surfaces by adaptively adjusting the pixel-to-pixel projection intensity according to the surface reflectivity. First, three sets of orthogonal color fringe patterns and a sequence of uniform gray-level patterns with different gray levels are projected onto a measured surface by a projector. The patterns are deformed with respect to the object surface and captured by a camera from a different viewpoint. Subsequently, the optimal projection intensity at each pixel is determined by fusing different gray levels and transforming the camera pixel coordinate system into the projector pixel coordinate system. Finally, the adapted fringe patterns are created and used for 3D shape measurement. Experimental results on a flat checkerboard and shiny objects demonstrate that the proposed method can measure shiny surfaces with high accuracy.
Extraction of tacit knowledge from large ADME data sets via pairwise analysis.
Keefer, Christopher E; Chang, George; Kauffman, Gregory W
2011-06-15
Pharmaceutical companies routinely collect data across multiple projects for common ADME endpoints. Although at the time of collection the data is intended for use in decision making within a specific project, knowledge can be gained by data mining the entire cross-project data set for patterns of structure-activity relationships (SAR) that may be applied to any project. One such data mining method is pairwise analysis. This method has the advantage of being able to identify small structural changes that lead to significant changes in activity. In this paper, we describe the process for full pairwise analysis of our high-throughput ADME assays routinely used for compound discovery efforts at Pfizer (microsomal clearance, passive membrane permeability, P-gp efflux, and lipophilicity). We also describe multiple strategies for the application of these transforms in a prospective manner during compound design. Finally, a detailed analysis of the activity patterns in pairs of compounds that share the same molecular transformation reveals multiple types of transforms from an SAR perspective. These include bioisosteres, additives, multiplicatives, and a type we call switches as they act to either turn on or turn off an activity. Copyright © 2011 Elsevier Ltd. All rights reserved.
Pareto optimal pairwise sequence alignment.
DeRonne, Kevin W; Karypis, George
2013-01-01
Sequence alignment using evolutionary profiles is a commonly employed tool when investigating a protein. Many profile-profile scoring functions have been developed for use in such alignments, but there has not yet been a comprehensive study of Pareto optimal pairwise alignments for combining multiple such functions. We show that the problem of generating Pareto optimal pairwise alignments has an optimal substructure property, and develop an efficient algorithm for generating Pareto optimal frontiers of pairwise alignments. All possible sets of two, three, and four profile scoring functions are used from a pool of 11 functions and applied to 588 pairs of proteins in the ce_ref data set. The performance of the best objective combinations on ce_ref is also evaluated on an independent set of 913 protein pairs extracted from the BAliBASE RV11 data set. Our dynamic-programming-based heuristic approach produces approximated Pareto optimal frontiers of pairwise alignments that contain comparable alignments to those on the exact frontier, but on average in less than 1/58th the time in the case of four objectives. Our results show that the Pareto frontiers contain alignments whose quality is better than the alignments obtained by single objectives. However, the task of identifying a single high-quality alignment among those in the Pareto frontier remains challenging.
Metabolic network prediction through pairwise rational kernels.
Roche-Lima, Abiel; Domaratzki, Michael; Fristensky, Brian
2014-09-26
Metabolic networks are represented by the set of metabolic pathways. Metabolic pathways are a series of biochemical reactions, in which the product (output) from one reaction serves as the substrate (input) to another reaction. Many pathways remain incompletely characterized. One of the major challenges of computational biology is to obtain better models of metabolic pathways. Existing models are dependent on the annotation of the genes. This propagates error accumulation when the pathways are predicted by incorrectly annotated genes. Pairwise classification methods are supervised learning methods used to classify new pair of entities. Some of these classification methods, e.g., Pairwise Support Vector Machines (SVMs), use pairwise kernels. Pairwise kernels describe similarity measures between two pairs of entities. Using pairwise kernels to handle sequence data requires long processing times and large storage. Rational kernels are kernels based on weighted finite-state transducers that represent similarity measures between sequences or automata. They have been effectively used in problems that handle large amount of sequence information such as protein essentiality, natural language processing and machine translations. We create a new family of pairwise kernels using weighted finite-state transducers (called Pairwise Rational Kernel (PRK)) to predict metabolic pathways from a variety of biological data. PRKs take advantage of the simpler representations and faster algorithms of transducers. Because raw sequence data can be used, the predictor model avoids the errors introduced by incorrect gene annotations. We then developed several experiments with PRKs and Pairwise SVM to validate our methods using the metabolic network of Saccharomyces cerevisiae. As a result, when PRKs are used, our method executes faster in comparison with other pairwise kernels. Also, when we use PRKs combined with other simple kernels that include evolutionary information, the accuracy
Freud, Géza
1971-01-01
Orthogonal Polynomials contains an up-to-date survey of the general theory of orthogonal polynomials. It deals with the problem of polynomials and reveals that the sequence of these polynomials forms an orthogonal system with respect to a non-negative m-distribution defined on the real numerical axis. Comprised of five chapters, the book begins with the fundamental properties of orthogonal polynomials. After discussing the momentum problem, it then explains the quadrature procedure, the convergence theory, and G. Szegő's theory. This book is useful for those who intend to use it as referenc
Pseudo inputs for pairwise learning with Gaussian processes
DEFF Research Database (Denmark)
Nielsen, Jens Brehm; Jensen, Bjørn Sand; Larsen, Jan
2012-01-01
We consider learning and prediction of pairwise comparisons between instances. The problem is motivated from a perceptual view point, where pairwise comparisons serve as an effective and extensively used paradigm. A state-of-the-art method for modeling pairwise data in high dimensional domains...... is based on a classical pairwise probit likelihood imposed with a Gaussian process prior. While extremely flexible, this non-parametric method struggles with an inconvenient O(n3) scaling in terms of the n input instances which limits the method only to smaller problems. To overcome this, we derive...... to other similar approximations that have been applied in standard Gaussian process regression and classification problems such as FI(T)C and PI(T)C....
International Nuclear Information System (INIS)
Paulinelli, H G; De Souza, S M; Rojas, Onofre
2013-01-01
In this paper we explore the entanglement in an orthogonal dimer-plaquette Ising–Heisenberg chain, assembled between plaquette edges, also known as orthogonal dimer plaquettes. The quantum entanglement properties involving an infinite chain structure are quite important, not only because the mathematical calculation is cumbersome but also because real materials are well represented by infinite chains. Using the local gauge symmetry of this model, we are able to map onto a simple spin-1 like Ising and spin-1/2 Heisenberg dimer model with single effective ion anisotropy. Thereafter this model can be solved using the decoration transformation and transfer matrix approach. First, we discuss the phase diagram at zero temperature of this model, where we find five ground states, one ferromagnetic, one antiferromagnetic, one triplet–triplet disordered and one triplet–singlet disordered phase, beside a dimer ferromagnetic–antiferromagnetic phase. In addition, we discuss the thermodynamic properties such as entropy, where we display the residual entropy. Furthermore, using the nearest site correlation function it is possible also to analyze the pairwise thermal entanglement for both orthogonal dimers. Additionally, we discuss the threshold temperature of the entangled region as a function of Hamiltonian parameters. We find a quite interesting thin reentrance threshold temperature for one of the dimers, and we also discuss the differences and similarities for both dimers. (paper)
MRI isotropic resolution reconstruction from two orthogonal scans
Tamez-Pena, Jose G.; Totterman, Saara; Parker, Kevin J.
2001-07-01
An algorithm for the reconstructions of ISO-resolution volumetric MR data sets from two standard orthogonal MR scans having anisotropic resolution has been developed. The reconstruction algorithm starts by registering a pair of orthogonal volumetric MR data sets. The registration is done by maximizing the correlation between the gradient magnitude using a simple translation-rotation model in a multi-resolution approach. Then algorithm assumes that the individual voxels on the MR data are an average of the magnetic resonance properties of an elongated imaging volume. Then, the process is modeled as the projection of MR properties into a single sensor. This model allows the derivation of a set of linear equations that can be used to recover the MR properties of every single voxel in the SO-resolution volume given only two orthogonal MR scans. Projections on convex sets (POCS) was used to solve the set of linear equations. Experimental results show the advantage of having a ISO-resolution reconstructions for the visualization and analysis of small and thin muscular structures.
SVM-dependent pairwise HMM: an application to protein pairwise alignments.
Orlando, Gabriele; Raimondi, Daniele; Khan, Taushif; Lenaerts, Tom; Vranken, Wim F
2017-12-15
Methods able to provide reliable protein alignments are crucial for many bioinformatics applications. In the last years many different algorithms have been developed and various kinds of information, from sequence conservation to secondary structure, have been used to improve the alignment performances. This is especially relevant for proteins with highly divergent sequences. However, recent works suggest that different features may have different importance in diverse protein classes and it would be an advantage to have more customizable approaches, capable to deal with different alignment definitions. Here we present Rigapollo, a highly flexible pairwise alignment method based on a pairwise HMM-SVM that can use any type of information to build alignments. Rigapollo lets the user decide the optimal features to align their protein class of interest. It outperforms current state of the art methods on two well-known benchmark datasets when aligning highly divergent sequences. A Python implementation of the algorithm is available at http://ibsquare.be/rigapollo. wim.vranken@vub.be. Supplementary data are available at Bioinformatics online. © The Author (2017). Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com
Generalizations of orthogonal polynomials
Bultheel, A.; Cuyt, A.; van Assche, W.; van Barel, M.; Verdonk, B.
2005-07-01
We give a survey of recent generalizations of orthogonal polynomials. That includes multidimensional (matrix and vector orthogonal polynomials) and multivariate versions, multipole (orthogonal rational functions) variants, and extensions of the orthogonality conditions (multiple orthogonality). Most of these generalizations are inspired by the applications in which they are applied. We also give a glimpse of these applications, which are usually generalizations of applications where classical orthogonal polynomials also play a fundamental role: moment problems, numerical quadrature, rational approximation, linear algebra, recurrence relations, and random matrices.
Statistical physics of pairwise probability models
DEFF Research Database (Denmark)
Roudi, Yasser; Aurell, Erik; Hertz, John
2009-01-01
(dansk abstrakt findes ikke) Statistical models for describing the probability distribution over the states of biological systems are commonly used for dimensional reduction. Among these models, pairwise models are very attractive in part because they can be fit using a reasonable amount of data......: knowledge of the means and correlations between pairs of elements in the system is sufficient. Not surprisingly, then, using pairwise models for studying neural data has been the focus of many studies in recent years. In this paper, we describe how tools from statistical physics can be employed for studying...
Jos, Sujit; Kumar, Preetam; Chakrabarti, Saswat
Orthogonal and quasi-orthogonal codes are integral part of any DS-CDMA based cellular systems. Orthogonal codes are ideal for use in perfectly synchronous scenario like downlink cellular communication. Quasi-orthogonal codes are preferred over orthogonal codes in the uplink communication where perfect synchronization cannot be achieved. In this paper, we attempt to compare orthogonal and quasi-orthogonal codes in presence of timing synchronization error. This will give insight into the synchronization demands in DS-CDMA systems employing the two classes of sequences. The synchronization error considered is smaller than chip duration. Monte-Carlo simulations have been carried out to verify the analytical and numerical results.
International Nuclear Information System (INIS)
Fonville, Judith M.; Bylesjoe, Max; Coen, Muireann; Nicholson, Jeremy K.; Holmes, Elaine; Lindon, John C.; Rantalainen, Mattias
2011-01-01
Highlights: → Non-linear modeling of metabonomic data using K-OPLS. → automated optimization of the kernel parameter by simulated annealing. → K-OPLS provides improved prediction performance for exemplar spectral data sets. → software implementation available for R and Matlab under GPL v2 license. - Abstract: Linear multivariate projection methods are frequently applied for predictive modeling of spectroscopic data in metabonomic studies. The OPLS method is a commonly used computational procedure for characterizing spectral metabonomic data, largely due to its favorable model interpretation properties providing separate descriptions of predictive variation and response-orthogonal structured noise. However, when the relationship between descriptor variables and the response is non-linear, conventional linear models will perform sub-optimally. In this study we have evaluated to what extent a non-linear model, kernel-based orthogonal projections to latent structures (K-OPLS), can provide enhanced predictive performance compared to the linear OPLS model. Just like its linear counterpart, K-OPLS provides separate model components for predictive variation and response-orthogonal structured noise. The improved model interpretation by this separate modeling is a property unique to K-OPLS in comparison to other kernel-based models. Simulated annealing (SA) was used for effective and automated optimization of the kernel-function parameter in K-OPLS (SA-K-OPLS). Our results reveal that the non-linear K-OPLS model provides improved prediction performance in three separate metabonomic data sets compared to the linear OPLS model. We also demonstrate how response-orthogonal K-OPLS components provide valuable biological interpretation of model and data. The metabonomic data sets were acquired using proton Nuclear Magnetic Resonance (NMR) spectroscopy, and include a study of the liver toxin galactosamine, a study of the nephrotoxin mercuric chloride and a study of
Pairwise Constraint-Guided Sparse Learning for Feature Selection.
Liu, Mingxia; Zhang, Daoqiang
2016-01-01
Feature selection aims to identify the most informative features for a compact and accurate data representation. As typical supervised feature selection methods, Lasso and its variants using L1-norm-based regularization terms have received much attention in recent studies, most of which use class labels as supervised information. Besides class labels, there are other types of supervised information, e.g., pairwise constraints that specify whether a pair of data samples belong to the same class (must-link constraint) or different classes (cannot-link constraint). However, most of existing L1-norm-based sparse learning methods do not take advantage of the pairwise constraints that provide us weak and more general supervised information. For addressing that problem, we propose a pairwise constraint-guided sparse (CGS) learning method for feature selection, where the must-link and the cannot-link constraints are used as discriminative regularization terms that directly concentrate on the local discriminative structure of data. Furthermore, we develop two variants of CGS, including: 1) semi-supervised CGS that utilizes labeled data, pairwise constraints, and unlabeled data and 2) ensemble CGS that uses the ensemble of pairwise constraint sets. We conduct a series of experiments on a number of data sets from University of California-Irvine machine learning repository, a gene expression data set, two real-world neuroimaging-based classification tasks, and two large-scale attribute classification tasks. Experimental results demonstrate the efficacy of our proposed methods, compared with several established feature selection methods.
Rotation of 2D orthogonal polynomials
Czech Academy of Sciences Publication Activity Database
Yang, B.; Flusser, Jan; Kautský, J.
2018-01-01
Roč. 102, č. 1 (2018), s. 44-49 ISSN 0167-8655 R&D Projects: GA ČR GA15-16928S Institutional support: RVO:67985556 Keywords : Rotation invariants * Orthogonal polynomials * Recurrent relation * Hermite-like polynomials * Hermite moments Subject RIV: JD - Computer Applications, Robotics Impact factor: 1.995, year: 2016 http://library.utia.cas.cz/separaty/2017/ZOI/flusser-0483250.pdf
A scalable pairwise class interaction framework for multidimensional classification
DEFF Research Database (Denmark)
Arias, Jacinto; Gámez, Jose A.; Nielsen, Thomas Dyhre
2016-01-01
We present a general framework for multidimensional classification that cap- tures the pairwise interactions between class variables. The pairwise class inter- actions are encoded using a collection of base classifiers (Phase 1), for which the class predictions are combined in a Markov random fie...
Dynamics of pairwise motions in the Cosmic Web
Hellwing, Wojciech A.
2016-10-01
We present results of analysis of the dark matter (DM) pairwise velocity statistics in different Cosmic Web environments. We use the DM velocity and density field from the Millennium 2 simulation together with the NEXUS+ algorithm to segment the simulation volume into voxels uniquely identifying one of the four possible environments: nodes, filaments, walls or cosmic voids. We show that the PDFs of the mean infall velocities v 12 as well as its spatial dependence together with the perpendicular and parallel velocity dispersions bear a significant signal of the large-scale structure environment in which DM particle pairs are embedded. The pairwise flows are notably colder and have smaller mean magnitude in wall and voids, when compared to much denser environments of filaments and nodes. We discuss on our results, indicating that they are consistent with a simple theoretical predictions for pairwise motions as induced by gravitational instability mechanism. Our results indicate that the Cosmic Web elements are coherent dynamical entities rather than just temporal geometrical associations. In addition it should be possible to observationally test various Cosmic Web finding algorithms by segmenting available peculiar velocity data and studying resulting pairwise velocity statistics.
Supplier Evaluation Process by Pairwise Comparisons
Directory of Open Access Journals (Sweden)
Arkadiusz Kawa
2015-01-01
Full Text Available We propose to assess suppliers by using consistency-driven pairwise comparisons for tangible and intangible criteria. The tangible criteria are simpler to compare (e.g., the price of a service is lower than that of another service with identical characteristics. Intangible criteria are more difficult to assess. The proposed model combines assessments of both types of criteria. The main contribution of this paper is the presentation of an extension framework for the selection of suppliers in a procurement process. The final weights are computed from relative pairwise comparisons. For the needs of the paper, surveys were conducted among Polish managers dealing with cooperation with suppliers in their enterprises. The Polish practice and restricted bidding are discussed, too.
G-matrices, J-orthogonal Matrices, and Their Sign Patterns
Czech Academy of Sciences Publication Activity Database
Fiedler, Miroslav; Hall, F.J.; Rozložník, Miroslav
-, subm. 2015 (2018) ISSN 0024-3795 R&D Projects: GA ČR(CZ) GAP108/11/0853 Institutional support: RVO:67985807 Keywords : G-matrix * J-orthogonal matrich * Cauchy matrix * sign pattern matrix Subject RIV: BA - General Mathematics Impact factor: 0.973, year: 2016
Doctoral Program Selection Using Pairwise Comparisons.
Tadisina, Suresh K.; Bhasin, Vijay
1989-01-01
The application of a pairwise comparison methodology (Saaty's Analytic Hierarchy Process) to the doctoral program selection process is illustrated. A hierarchy for structuring and facilitating the doctoral program selection decision is described. (Author/MLW)
Preference Learning and Ranking by Pairwise Comparison
Fürnkranz, Johannes; Hüllermeier, Eyke
This chapter provides an overview of recent work on preference learning and ranking via pairwise classification. The learning by pairwise comparison (LPC) paradigm is the natural machine learning counterpart to the relational approach to preference modeling and decision making. From a machine learning point of view, LPC is especially appealing as it decomposes a possibly complex prediction problem into a certain number of learning problems of the simplest type, namely binary classification. We explain how to approach different preference learning problems, such as label and instance ranking, within the framework of LPC. We primarily focus on methodological aspects, but also address theoretical questions as well as algorithmic and complexity issues.
DEFF Research Database (Denmark)
Omidikia, Nematollah; Kompany-Zareh, Mohsen
2013-01-01
Employment of Uninformative Variable Elimination (UVE) as a robust variable selection method is reported in this study. Each regression coefficient represents the contribution of the corresponding variable in the established model, but in the presence of uninformative variables as well as colline......Employment of Uninformative Variable Elimination (UVE) as a robust variable selection method is reported in this study. Each regression coefficient represents the contribution of the corresponding variable in the established model, but in the presence of uninformative variables as well...... as collinearity reliability of the regression coefficient's magnitude is suspicious. Successive Projection Algorithm (SPA) and Gram-Schmidt Orthogonalization (GSO) were implemented as pre-selection technique for removing collinearity and redundancy among variables in the model. Uninformative variable elimination...
Zhang, Guoqing; Sun, Huaijiang; Xia, Guiyu; Sun, Quansen
2016-07-07
Sparse representation based classification (SRC) has been developed and shown great potential for real-world application. Based on SRC, Yang et al. [10] devised a SRC steered discriminative projection (SRC-DP) method. However, as a linear algorithm, SRC-DP cannot handle the data with highly nonlinear distribution. Kernel sparse representation-based classifier (KSRC) is a non-linear extension of SRC and can remedy the drawback of SRC. KSRC requires the use of a predetermined kernel function and selection of the kernel function and its parameters is difficult. Recently, multiple kernel learning for SRC (MKL-SRC) [22] has been proposed to learn a kernel from a set of base kernels. However, MKL-SRC only considers the within-class reconstruction residual while ignoring the between-class relationship, when learning the kernel weights. In this paper, we propose a novel multiple kernel sparse representation-based classifier (MKSRC), and then we use it as a criterion to design a multiple kernel sparse representation based orthogonal discriminative projection method (MK-SR-ODP). The proposed algorithm aims at learning a projection matrix and a corresponding kernel from the given base kernels such that in the low dimension subspace the between-class reconstruction residual is maximized and the within-class reconstruction residual is minimized. Furthermore, to achieve a minimum overall loss by performing recognition in the learned low-dimensional subspace, we introduce cost information into the dimensionality reduction method. The solutions for the proposed method can be efficiently found based on trace ratio optimization method [33]. Extensive experimental results demonstrate the superiority of the proposed algorithm when compared with the state-of-the-art methods.
Orthogonality Measurement for Homogenous Projects-Bases
Ivan, Ion; Sandu, Andrei; Popa, Marius
2009-01-01
The homogenous projects-base concept is defined. Next, the necessary steps to create a homogenous projects-base are presented. A metric system is built, which then will be used for analyzing projects. The indicators which are meaningful for analyzing a homogenous projects-base are selected. The given hypothesis is experimentally verified. The…
Ragain, Stephen; Ugander, Johan
2016-01-01
As datasets capturing human choices grow in richness and scale---particularly in online domains---there is an increasing need for choice models that escape traditional choice-theoretic axioms such as regularity, stochastic transitivity, and Luce's choice axiom. In this work we introduce the Pairwise Choice Markov Chain (PCMC) model of discrete choice, an inferentially tractable model that does not assume any of the above axioms while still satisfying the foundational axiom of uniform expansio...
Selecting numerical scales for pairwise comparisons
International Nuclear Information System (INIS)
Elliott, Michael A.
2010-01-01
It is often desirable in decision analysis problems to elicit from an individual the rankings of a population of attributes according to the individual's preference and to understand the degree to which each attribute is preferred to the others. A common method for obtaining this information involves the use of pairwise comparisons, which allows an analyst to convert subjective expressions of preference between two attributes into numerical values indicating preferences across the entire population of attributes. Key to the use of pairwise comparisons is the underlying numerical scale that is used to convert subjective linguistic expressions of preference into numerical values. This scale represents the psychological manner in which individuals perceive increments of preference among abstract attributes and it has important implications about the distribution and consistency of an individual's preferences. Three popular scale types, the traditional integer scales, balanced scales and power scales are examined. Results of a study of 64 individuals responding to a hypothetical decision problem show that none of these scales can accurately capture the preferences of all individuals. A study of three individuals working on an actual engineering decision problem involving the design of a decay heat removal system for a nuclear fission reactor show that the choice of scale can affect the preferred decision. It is concluded that applications of pairwise comparisons would benefit from permitting participants to choose the scale that best models their own particular way of thinking about the relative preference of attributes.
Simultaneous orthogonal plane imaging.
Mickevicius, Nikolai J; Paulson, Eric S
2017-11-01
Intrafraction motion can result in a smearing of planned external beam radiation therapy dose distributions, resulting in an uncertainty in dose actually deposited in tissue. The purpose of this paper is to present a pulse sequence that is capable of imaging a moving target at a high frame rate in two orthogonal planes simultaneously for MR-guided radiotherapy. By balancing the zero gradient moment on all axes, slices in two orthogonal planes may be spatially encoded simultaneously. The orthogonal slice groups may be acquired with equal or nonequal echo times. A Cartesian spoiled gradient echo simultaneous orthogonal plane imaging (SOPI) sequence was tested in phantom and in vivo. Multiplexed SOPI acquisitions were performed in which two parallel slices were imaged along two orthogonal axes simultaneously. An autocalibrating phase-constrained 2D-SENSE-GRAPPA (generalized autocalibrating partially parallel acquisition) algorithm was implemented to reconstruct the multiplexed data. SOPI images without intraslice motion artifacts were reconstructed at a maximum frame rate of 8.16 Hz. The 2D-SENSE-GRAPPA reconstruction separated the parallel slices aliased along each orthogonal axis. The high spatiotemporal resolution provided by SOPI has the potential to be beneficial for intrafraction motion management during MR-guided radiation therapy or other MRI-guided interventions. Magn Reson Med 78:1700-1710, 2017. © 2016 International Society for Magnetic Resonance in Medicine. © 2016 International Society for Magnetic Resonance in Medicine.
The Role of Middlemen inEfficient and Strongly Pairwise Stable Networks
Gilles, R.P.; Chakrabarti, S.; Sarangi, S.; Badasyan, N.
2004-01-01
We examine the strong pairwise stability concept in network formation theory under collective network benefits.Strong pairwise stability considers a pair of players to add a link through mutual consent while permitting them to unilaterally delete any subset of links under their control.We examine
No need for external orthogonality in subsystem density-functional theory.
Unsleber, Jan P; Neugebauer, Johannes; Jacob, Christoph R
2016-08-03
Recent reports on the necessity of using externally orthogonal orbitals in subsystem density-functional theory (SDFT) [Annu. Rep. Comput. Chem., 8, 2012, 53; J. Phys. Chem. A, 118, 2014, 9182] are re-investigated. We show that in the basis-set limit, supermolecular Kohn-Sham-DFT (KS-DFT) densities can exactly be represented as a sum of subsystem densities, even if the subsystem orbitals are not externally orthogonal. This is illustrated using both an analytical example and in basis-set free numerical calculations for an atomic test case. We further show that even with finite basis sets, SDFT calculations using accurate reconstructed potentials can closely approach the supermolecular KS-DFT density, and that the deviations between SDFT and KS-DFT decrease as the basis-set limit is approached. Our results demonstrate that formally, there is no need to enforce external orthogonality in SDFT, even though this might be a useful strategy when developing projection-based DFT embedding schemes.
Automatic Camera Calibration Using Multiple Sets of Pairwise Correspondences.
Vasconcelos, Francisco; Barreto, Joao P; Boyer, Edmond
2018-04-01
We propose a new method to add an uncalibrated node into a network of calibrated cameras using only pairwise point correspondences. While previous methods perform this task using triple correspondences, these are often difficult to establish when there is limited overlap between different views. In such challenging cases we must rely on pairwise correspondences and our solution becomes more advantageous. Our method includes an 11-point minimal solution for the intrinsic and extrinsic calibration of a camera from pairwise correspondences with other two calibrated cameras, and a new inlier selection framework that extends the traditional RANSAC family of algorithms to sampling across multiple datasets. Our method is validated on different application scenarios where a lack of triple correspondences might occur: addition of a new node to a camera network; calibration and motion estimation of a moving camera inside a camera network; and addition of views with limited overlap to a Structure-from-Motion model.
Scattering theory and orthogonal polynomials
International Nuclear Information System (INIS)
Geronimo, J.S.
1977-01-01
The application of the techniques of scattering theory to the study of polynomials orthogonal on the unit circle and a finite segment of the real line is considered. The starting point is the recurrence relations satisfied by the polynomials instead of the orthogonality condition. A set of two two terms recurrence relations for polynomials orthogonal on the real line is presented and used. These recurrence relations play roles analogous to those satisfied by polynomials orthogonal on unit circle. With these recurrence formulas a Wronskian theorem is proved and the Christoffel-Darboux formula is derived. In scattering theory a fundamental role is played by the Jost function. An analogy is deferred of this function and its analytic properties and the locations of its zeros investigated. The role of the analog Jost function in various properties of these orthogonal polynomials is investigated. The techniques of inverse scattering theory are also used. The discrete analogues of the Gelfand-Levitan and Marchenko equations are derived and solved. These techniques are used to calculate asymptotic formulas for the orthogonal polynomials. Finally Szego's theorem on toeplitz and Hankel determinants is proved using the recurrence formulas and some properties of the Jost function. The techniques of inverse scattering theory are used to calculate the correction terms
New discrete orthogonal moments for signal analysis
Czech Academy of Sciences Publication Activity Database
Honarvar Shakibaei Asli, Barmak; Flusser, Jan
2017-01-01
Roč. 141, č. 1 (2017), s. 57-73 ISSN 0165-1684 R&D Projects: GA ČR GA15-16928S Institutional support: RVO:67985556 Keywords : Orthogonal polynomials * Moment functions * Z-transform * Rodrigues formula * Hypergeometric form Subject RIV: JD - Computer Applications, Robotics OBOR OECD: Computer sciences, information science, bioinformathics (hardware development to be 2.2, social aspect to be 5.8) Impact factor: 3.110, year: 2016 http://library.utia.cas.cz/separaty/2017/ZOI/flusser-0475248.pdf
A predictive model of music preference using pairwise comparisons
DEFF Research Database (Denmark)
Jensen, Bjørn Sand; Gallego, Javier Saez; Larsen, Jan
2012-01-01
Music recommendation is an important aspect of many streaming services and multi-media systems, however, it is typically based on so-called collaborative filtering methods. In this paper we consider the recommendation task from a personal viewpoint and examine to which degree music preference can...... be elicited and predicted using simple and robust queries such as pairwise comparisons. We propose to model - and in turn predict - the pairwise music preference using a very flexible model based on Gaussian Process priors for which we describe the required inference. We further propose a specific covariance...
Orthogonality and Dimensionality
Directory of Open Access Journals (Sweden)
Olivier Brunet
2013-12-01
Full Text Available In this article, we present what we believe to be a simple way to motivate the use of Hilbert spaces in quantum mechanics. To achieve this, we study the way the notion of dimension can, at a very primitive level, be defined as the cardinality of a maximal collection of mutually orthogonal elements (which, for instance, can be seen as spatial directions. Following this idea, we develop a formalism based on two basic ingredients, namely an orthogonality relation and matroids which are a very generic algebraic structure permitting to define a notion of dimension. Having obtained what we call orthomatroids, we then show that, in high enough dimension, the basic constituants of orthomatroids (more precisely the simple and irreducible ones are isomorphic to generalized Hilbert lattices, so that their presence is a direct consequence of an orthogonality-based characterization of dimension.
Revisiting the classification of curtoviruses based on genome-wide pairwise identity
Varsani, Arvind; Martin, Darren Patrick; Navas-Castillo, Jesú s; Moriones, Enrique; Herná ndez-Zepeda, Cecilia; Idris, Ali; Murilo Zerbini, F.; Brown, Judith K.
2014-01-01
Members of the genus Curtovirus (family Geminiviridae) are important pathogens of many wild and cultivated plant species. Until recently, relatively few full curtovirus genomes have been characterised. However, with the 19 full genome sequences now available in public databases, we revisit the proposed curtovirus species and strain classification criteria. Using pairwise identities coupled with phylogenetic evidence, revised species and strain demarcation guidelines have been instituted. Specifically, we have established 77% genome-wide pairwise identity as a species demarcation threshold and 94% genome-wide pairwise identity as a strain demarcation threshold. Hence, whereas curtovirus sequences with >77% genome-wide pairwise identity would be classified as belonging to the same species, those sharing >94% identity would be classified as belonging to the same strain. We provide step-by-step guidelines to facilitate the classification of newly discovered curtovirus full genome sequences and a set of defined criteria for naming new species and strains. The revision yields three curtovirus species: Beet curly top virus (BCTV), Spinach severe surly top virus (SpSCTV) and Horseradish curly top virus (HrCTV). © 2014 Springer-Verlag Wien.
Revisiting the classification of curtoviruses based on genome-wide pairwise identity
Varsani, Arvind
2014-01-25
Members of the genus Curtovirus (family Geminiviridae) are important pathogens of many wild and cultivated plant species. Until recently, relatively few full curtovirus genomes have been characterised. However, with the 19 full genome sequences now available in public databases, we revisit the proposed curtovirus species and strain classification criteria. Using pairwise identities coupled with phylogenetic evidence, revised species and strain demarcation guidelines have been instituted. Specifically, we have established 77% genome-wide pairwise identity as a species demarcation threshold and 94% genome-wide pairwise identity as a strain demarcation threshold. Hence, whereas curtovirus sequences with >77% genome-wide pairwise identity would be classified as belonging to the same species, those sharing >94% identity would be classified as belonging to the same strain. We provide step-by-step guidelines to facilitate the classification of newly discovered curtovirus full genome sequences and a set of defined criteria for naming new species and strains. The revision yields three curtovirus species: Beet curly top virus (BCTV), Spinach severe surly top virus (SpSCTV) and Horseradish curly top virus (HrCTV). © 2014 Springer-Verlag Wien.
Wang, Yang; Wu, Lin
2018-07-01
Low-Rank Representation (LRR) is arguably one of the most powerful paradigms for Multi-view spectral clustering, which elegantly encodes the multi-view local graph/manifold structures into an intrinsic low-rank self-expressive data similarity embedded in high-dimensional space, to yield a better graph partition than their single-view counterparts. In this paper we revisit it with a fundamentally different perspective by discovering LRR as essentially a latent clustered orthogonal projection based representation winged with an optimized local graph structure for spectral clustering; each column of the representation is fundamentally a cluster basis orthogonal to others to indicate its members, which intuitively projects the view-specific feature representation to be the one spanned by all orthogonal basis to characterize the cluster structures. Upon this finding, we propose our technique with the following: (1) We decompose LRR into latent clustered orthogonal representation via low-rank matrix factorization, to encode the more flexible cluster structures than LRR over primal data objects; (2) We convert the problem of LRR into that of simultaneously learning orthogonal clustered representation and optimized local graph structure for each view; (3) The learned orthogonal clustered representations and local graph structures enjoy the same magnitude for multi-view, so that the ideal multi-view consensus can be readily achieved. The experiments over multi-view datasets validate its superiority, especially over recent state-of-the-art LRR models. Copyright © 2018 Elsevier Ltd. All rights reserved.
Orthogonal Multiwavelet Frames in L2Rd
Directory of Open Access Journals (Sweden)
Liu Zhanwei
2012-01-01
Full Text Available We characterize the orthogonal frames and orthogonal multiwavelet frames in L2Rd with matrix dilations of the form (Df(x=detAf(Ax, where A is an arbitrary expanding d×d matrix with integer coefficients. Firstly, through two arbitrarily multiwavelet frames, we give a simple construction of a pair of orthogonal multiwavelet frames. Then, by using the unitary extension principle, we present an algorithm for the construction of arbitrarily many orthogonal multiwavelet tight frames. Finally, we give a general construction algorithm for orthogonal multiwavelet tight frames from a scaling function.
Face Hallucination with Linear Regression Model in Semi-Orthogonal Multilinear PCA Method
Asavaskulkiet, Krissada
2018-04-01
In this paper, we propose a new face hallucination technique, face images reconstruction in HSV color space with a semi-orthogonal multilinear principal component analysis method. This novel hallucination technique can perform directly from tensors via tensor-to-vector projection by imposing the orthogonality constraint in only one mode. In our experiments, we use facial images from FERET database to test our hallucination approach which is demonstrated by extensive experiments with high-quality hallucinated color faces. The experimental results assure clearly demonstrated that we can generate photorealistic color face images by using the SO-MPCA subspace with a linear regression model.
Unjamming in models with analytic pairwise potentials
Kooij, Stefan; Lerner, Edan
2017-06-01
Canonical models for studying the unjamming scenario in systems of soft repulsive particles assume pairwise potentials with a sharp cutoff in the interaction range. The sharp cutoff renders the potential nonanalytic but makes it possible to describe many properties of the solid in terms of the coordination number z , which has an unambiguous definition in these cases. Pairwise potentials without a sharp cutoff in the interaction range have not been studied in this context, but should in fact be considered to understand the relevance of the unjamming phenomenology in systems where such a cutoff is not present. In this work we explore two systems with such interactions: an inverse power law and an exponentially decaying pairwise potential, with the control parameters being the exponent (of the inverse power law) for the former and the number density for the latter. Both systems are shown to exhibit the characteristic features of the unjamming transition, among which are the vanishing of the shear-to-bulk modulus ratio and the emergence of an excess of low-frequency vibrational modes. We establish a relation between the pressure-to-bulk modulus ratio and the distance to unjamming in each of our model systems. This allows us to predict the dependence of other key observables on the distance to unjamming. Our results provide the means for a quantitative estimation of the proximity of generic glass-forming models to the unjamming transition in the absence of a clear-cut definition of the coordination number and highlight the general irrelevance of nonaffine contributions to the bulk modulus.
Pairwise conjoint analysis of activity engagement choice
Wang, Donggen; Oppewal, H.; Timmermans, H.J.P.
2000-01-01
Information overload is a well-known problem of conjoint choice models when respondents have to evaluate a large number of attributes and/or attribute levels. In this paper we develop an alternative conjoint modelling approach, called pairwise conjoint analysis. It differs from conventional conjoint
PAIRWISE BLENDING OF HIGH LEVEL WASTE
International Nuclear Information System (INIS)
CERTA, P.J.
2006-01-01
The primary objective of this study is to demonstrate a mission scenario that uses pairwise and incidental blending of high level waste (HLW) to reduce the total mass of HLW glass. Secondary objectives include understanding how recent refinements to the tank waste inventory and solubility assumptions affect the mass of HLW glass and how logistical constraints may affect the efficacy of HLW blending
Mason, A M
2018-01-01
In this paper the authors apply to the zeros of families of L-functions with orthogonal or symplectic symmetry the method that Conrey and Snaith (Correlations of eigenvalues and Riemann zeros, 2008) used to calculate the n-correlation of the zeros of the Riemann zeta function. This method uses the Ratios Conjectures (Conrey, Farmer, and Zimbauer, 2008) for averages of ratios of zeta or L-functions. Katz and Sarnak (Zeroes of zeta functions and symmetry, 1999) conjecture that the zero statistics of families of L-functions have an underlying symmetry relating to one of the classical compact groups U(N), O(N) and USp(2N). Here the authors complete the work already done with U(N) (Conrey and Snaith, Correlations of eigenvalues and Riemann zeros, 2008) to show how new methods for calculating the n-level densities of eigenangles of random orthogonal or symplectic matrices can be used to create explicit conjectures for the n-level densities of zeros of L-functions with orthogonal or symplectic symmetry, including al...
Unjamming in models with analytic pairwise potentials
Kooij, S.; Lerner, E.
Canonical models for studying the unjamming scenario in systems of soft repulsive particles assume pairwise potentials with a sharp cutoff in the interaction range. The sharp cutoff renders the potential nonanalytic but makes it possible to describe many properties of the solid in terms of the
A Comparative Study of Pairwise Learning Methods Based on Kernel Ridge Regression.
Stock, Michiel; Pahikkala, Tapio; Airola, Antti; De Baets, Bernard; Waegeman, Willem
2018-06-12
Many machine learning problems can be formulated as predicting labels for a pair of objects. Problems of that kind are often referred to as pairwise learning, dyadic prediction, or network inference problems. During the past decade, kernel methods have played a dominant role in pairwise learning. They still obtain a state-of-the-art predictive performance, but a theoretical analysis of their behavior has been underexplored in the machine learning literature. In this work we review and unify kernel-based algorithms that are commonly used in different pairwise learning settings, ranging from matrix filtering to zero-shot learning. To this end, we focus on closed-form efficient instantiations of Kronecker kernel ridge regression. We show that independent task kernel ridge regression, two-step kernel ridge regression, and a linear matrix filter arise naturally as a special case of Kronecker kernel ridge regression, implying that all these methods implicitly minimize a squared loss. In addition, we analyze universality, consistency, and spectral filtering properties. Our theoretical results provide valuable insights into assessing the advantages and limitations of existing pairwise learning methods.
Power and sample-size estimation for microbiome studies using pairwise distances and PERMANOVA.
Kelly, Brendan J; Gross, Robert; Bittinger, Kyle; Sherrill-Mix, Scott; Lewis, James D; Collman, Ronald G; Bushman, Frederic D; Li, Hongzhe
2015-08-01
The variation in community composition between microbiome samples, termed beta diversity, can be measured by pairwise distance based on either presence-absence or quantitative species abundance data. PERMANOVA, a permutation-based extension of multivariate analysis of variance to a matrix of pairwise distances, partitions within-group and between-group distances to permit assessment of the effect of an exposure or intervention (grouping factor) upon the sampled microbiome. Within-group distance and exposure/intervention effect size must be accurately modeled to estimate statistical power for a microbiome study that will be analyzed with pairwise distances and PERMANOVA. We present a framework for PERMANOVA power estimation tailored to marker-gene microbiome studies that will be analyzed by pairwise distances, which includes: (i) a novel method for distance matrix simulation that permits modeling of within-group pairwise distances according to pre-specified population parameters; (ii) a method to incorporate effects of different sizes within the simulated distance matrix; (iii) a simulation-based method for estimating PERMANOVA power from simulated distance matrices; and (iv) an R statistical software package that implements the above. Matrices of pairwise distances can be efficiently simulated to satisfy the triangle inequality and incorporate group-level effects, which are quantified by the adjusted coefficient of determination, omega-squared (ω2). From simulated distance matrices, available PERMANOVA power or necessary sample size can be estimated for a planned microbiome study. © The Author 2015. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.
Pairwise Comparison and Distance Measure of Hesitant Fuzzy Linguistic Term Sets
Directory of Open Access Journals (Sweden)
Han-Chen Huang
2014-01-01
Full Text Available A hesitant fuzzy linguistic term set (HFLTS, allowing experts using several possible linguistic terms to assess a qualitative linguistic variable, is very useful to express people’s hesitancy in practical decision-making problems. Up to now, a little research has been done on the comparison and distance measure of HFLTSs. In this paper, we present a comparison method for HFLTSs based on pairwise comparisons of each linguistic term in the two HFLTSs. Then, a distance measure method based on the pairwise comparison matrix of HFLTSs is proposed, and we prove that this distance is equal to the distance of the average values of HFLTSs, which makes the distance measure much more simple. Finally, the pairwise comparison and distance measure methods are utilized to develop two multicriteria decision-making approaches under hesitant fuzzy linguistic environments. The results analysis shows that our methods in this paper are more reasonable.
SDT: a virus classification tool based on pairwise sequence alignment and identity calculation.
Directory of Open Access Journals (Sweden)
Brejnev Muhizi Muhire
Full Text Available The perpetually increasing rate at which viral full-genome sequences are being determined is creating a pressing demand for computational tools that will aid the objective classification of these genome sequences. Taxonomic classification approaches that are based on pairwise genetic identity measures are potentially highly automatable and are progressively gaining favour with the International Committee on Taxonomy of Viruses (ICTV. There are, however, various issues with the calculation of such measures that could potentially undermine the accuracy and consistency with which they can be applied to virus classification. Firstly, pairwise sequence identities computed based on multiple sequence alignments rather than on multiple independent pairwise alignments can lead to the deflation of identity scores with increasing dataset sizes. Also, when gap-characters need to be introduced during sequence alignments to account for insertions and deletions, methodological variations in the way that these characters are introduced and handled during pairwise genetic identity calculations can cause high degrees of inconsistency in the way that different methods classify the same sets of sequences. Here we present Sequence Demarcation Tool (SDT, a free user-friendly computer program that aims to provide a robust and highly reproducible means of objectively using pairwise genetic identity calculations to classify any set of nucleotide or amino acid sequences. SDT can produce publication quality pairwise identity plots and colour-coded distance matrices to further aid the classification of sequences according to ICTV approved taxonomic demarcation criteria. Besides a graphical interface version of the program for Windows computers, command-line versions of the program are available for a variety of different operating systems (including a parallel version for cluster computing platforms.
Numerical stability of orthogonalization methods with a non-standard inner product
Czech Academy of Sciences Publication Activity Database
Rozložník, Miroslav; Tůma, Miroslav; Smoktunowicz, A.; Kopal, J.
2012-01-01
Roč. 52, č. 4 (2012), s. 1035-1058 ISSN 0006-3835 R&D Projects: GA ČR(CZ) GAP108/11/0853; GA AV ČR IAA100300802 Institutional support: RVO:67985807 Keywords : orthogonalization schemes * QR factorization * Gram–Schmidt process * preconditioning * rounding error analysis Subject RIV: BA - General Mathematics Impact factor: 0.977, year: 2012
Orthogonality preserving infinite dimensional quadratic stochastic operators
International Nuclear Information System (INIS)
Akın, Hasan; Mukhamedov, Farrukh
2015-01-01
In the present paper, we consider a notion of orthogonal preserving nonlinear operators. We introduce π-Volterra quadratic operators finite and infinite dimensional settings. It is proved that any orthogonal preserving quadratic operator on finite dimensional simplex is π-Volterra quadratic operator. In infinite dimensional setting, we describe all π-Volterra operators in terms orthogonal preserving operators
Pairwise Trajectory Management (PTM): Concept Overview
Jones, Kenneth M.; Graff, Thomas J.; Chartrand, Ryan C.; Carreno, Victor; Kibler, Jennifer L.
2017-01-01
Pairwise Trajectory Management (PTM) is an Interval Management (IM) concept that utilizes airborne and ground-based capabilities to enable the implementation of airborne pairwise spacing capabilities in oceanic regions. The goal of PTM is to use airborne surveillance and tools to manage an "at or greater than" inter-aircraft spacing. Due to the precision of Automatic Dependent Surveillance-Broadcast (ADS-B) information and the use of airborne spacing guidance, the PTM minimum spacing distance will be less than distances a controller can support with current automation systems that support oceanic operations. Ground tools assist the controller in evaluating the traffic picture and determining appropriate PTM clearances to be issued. Avionics systems provide guidance information that allows the flight crew to conform to the PTM clearance issued by the controller. The combination of a reduced minimum distance and airborne spacing management will increase the capacity and efficiency of aircraft operations at a given altitude or volume of airspace. This paper provides an overview of the proposed application, description of a few key scenarios, high level discussion of expected air and ground equipment and procedure changes, overview of a potential flight crew human-machine interface that would support PTM operations and some initial PTM benefits results.
Theoretical Models for Orthogonal Cutting
DEFF Research Database (Denmark)
De Chiffre, Leonardo
This review of simple models for orthogonal cutting was extracted from: “L. De Chiffre: Metal Cutting Mechanics and Applications, D.Sc. Thesis, Technical University of Denmark, 1990.”......This review of simple models for orthogonal cutting was extracted from: “L. De Chiffre: Metal Cutting Mechanics and Applications, D.Sc. Thesis, Technical University of Denmark, 1990.”...
Fast and accurate estimation of the covariance between pairwise maximum likelihood distances
Directory of Open Access Journals (Sweden)
Manuel Gil
2014-09-01
Full Text Available Pairwise evolutionary distances are a model-based summary statistic for a set of molecular sequences. They represent the leaf-to-leaf path lengths of the underlying phylogenetic tree. Estimates of pairwise distances with overlapping paths covary because of shared mutation events. It is desirable to take these covariance structure into account to increase precision in any process that compares or combines distances. This paper introduces a fast estimator for the covariance of two pairwise maximum likelihood distances, estimated under general Markov models. The estimator is based on a conjecture (going back to Nei & Jin, 1989 which links the covariance to path lengths. It is proven here under a simple symmetric substitution model. A simulation shows that the estimator outperforms previously published ones in terms of the mean squared error.
Fast and accurate estimation of the covariance between pairwise maximum likelihood distances.
Gil, Manuel
2014-01-01
Pairwise evolutionary distances are a model-based summary statistic for a set of molecular sequences. They represent the leaf-to-leaf path lengths of the underlying phylogenetic tree. Estimates of pairwise distances with overlapping paths covary because of shared mutation events. It is desirable to take these covariance structure into account to increase precision in any process that compares or combines distances. This paper introduces a fast estimator for the covariance of two pairwise maximum likelihood distances, estimated under general Markov models. The estimator is based on a conjecture (going back to Nei & Jin, 1989) which links the covariance to path lengths. It is proven here under a simple symmetric substitution model. A simulation shows that the estimator outperforms previously published ones in terms of the mean squared error.
Orthogonal Polynomials and Special Functions
Assche, Walter
2003-01-01
The set of lectures from the Summer School held in Leuven in 2002 provide an up-to-date account of recent developments in orthogonal polynomials and special functions, in particular for algorithms for computer algebra packages, 3nj-symbols in representation theory of Lie groups, enumeration, multivariable special functions and Dunkl operators, asymptotics via the Riemann-Hilbert method, exponential asymptotics and the Stokes phenomenon. The volume aims at graduate students and post-docs working in the field of orthogonal polynomials and special functions, and in related fields interacting with orthogonal polynomials, such as combinatorics, computer algebra, asymptotics, representation theory, harmonic analysis, differential equations, physics. The lectures are self-contained requiring only a basic knowledge of analysis and algebra, and each includes many exercises.
Robust Subjective Visual Property Prediction from Crowdsourced Pairwise Labels.
Fu, Yanwei; Hospedales, Timothy M; Xiang, Tao; Xiong, Jiechao; Gong, Shaogang; Wang, Yizhou; Yao, Yuan
2016-03-01
The problem of estimating subjective visual properties from image and video has attracted increasing interest. A subjective visual property is useful either on its own (e.g. image and video interestingness) or as an intermediate representation for visual recognition (e.g. a relative attribute). Due to its ambiguous nature, annotating the value of a subjective visual property for learning a prediction model is challenging. To make the annotation more reliable, recent studies employ crowdsourcing tools to collect pairwise comparison labels. However, using crowdsourced data also introduces outliers. Existing methods rely on majority voting to prune the annotation outliers/errors. They thus require a large amount of pairwise labels to be collected. More importantly as a local outlier detection method, majority voting is ineffective in identifying outliers that can cause global ranking inconsistencies. In this paper, we propose a more principled way to identify annotation outliers by formulating the subjective visual property prediction task as a unified robust learning to rank problem, tackling both the outlier detection and learning to rank jointly. This differs from existing methods in that (1) the proposed method integrates local pairwise comparison labels together to minimise a cost that corresponds to global inconsistency of ranking order, and (2) the outlier detection and learning to rank problems are solved jointly. This not only leads to better detection of annotation outliers but also enables learning with extremely sparse annotations.
Theory of pairwise lesion interaction
International Nuclear Information System (INIS)
Harder, Dietrich; Virsik-Peuckert, Patricia; Bartels, Ernst
1992-01-01
A comparison between repair time constants measured both at the molecular and cellular levels has shown that the DNA double strand break is the molecular change of key importance in the causation of cellular effects such as chromosome aberrations and cell inactivation. Cell fusion experiments provided the evidence that it needs the pairwise interaction between two double strand breaks - or more exactly between the two ''repair sites'' arising from them in the course of enzymatic repair - to provide the faulty chromatin crosslink which leads to cytogenetic and cytolethal effects. These modern experiments have confirmed the classical assumption of pairwise lesion interaction (PLI) on which the models of Lea and Neary were based. It seems worthwhile to continue and complete the mathematical treatment of their proposed mechanism in order to show in quantitative terms that the well-known fractionation, protraction and linear energy transfer (LET) irradiation effects are consequences of or can at least be partly attributed to PLI. Arithmetic treatment of PLI - a second order reaction - has also the advantage of providing a prerequisite for further investigations into the stages of development of misrepair products such as chromatin crosslinks. It has been possible to formulate a completely arithmetic theory of PLI by consequently applying three biophysically permitted approximations - pure first order lesion repair kinetics, dose-independent repair time constants and low yield of the ionization/lesion conversion. The mathematical approach will be summarized here, including several formulae not elaborated at the time of previous publications. We will also study an application which sheds light on the chain of events involved in PLI. (author)
A decomposition of pairwise continuity via ideals
Directory of Open Access Journals (Sweden)
Mahes Wari
2016-02-01
Full Text Available In this paper, we introduce and study the notions of (i, j - regular - ℐ -closed sets, (i, j - Aℐ -sets, (i, j - ℐ -locally closed sets, p- Aℐ -continuous functions and p- ℐ -LC-continuous functions in ideal bitopological spaces and investigate some of their properties. Also, a new decomposition of pairwise continuity is obtained using these sets.
Modeling Expressed Emotions in Music using Pairwise Comparisons
DEFF Research Database (Denmark)
Madsen, Jens; Nielsen, Jens Brehm; Jensen, Bjørn Sand
2012-01-01
We introduce a two-alternative forced-choice experimental paradigm to quantify expressed emotions in music using the two wellknown arousal and valence (AV) dimensions. In order to produce AV scores from the pairwise comparisons and to visualize the locations of excerpts in the AV space, we...
On orthogonality preserving quadratic stochastic operators
Energy Technology Data Exchange (ETDEWEB)
Mukhamedov, Farrukh; Taha, Muhammad Hafizuddin Mohd [Department of Computational and Theoretical Sciences, Faculty of Science International Islamic University Malaysia, P.O. Box 141, 25710 Kuantan, Pahang Malaysia (Malaysia)
2015-05-15
A quadratic stochastic operator (in short QSO) is usually used to present the time evolution of differing species in biology. Some quadratic stochastic operators have been studied by Lotka and Volterra. In the present paper, we first give a simple characterization of Volterra QSO in terms of absolutely continuity of discrete measures. Further, we introduce a notion of orthogonal preserving QSO, and describe such kind of operators defined on two dimensional simplex. It turns out that orthogonal preserving QSOs are permutations of Volterra QSO. The associativity of genetic algebras generated by orthogonal preserving QSO is studied too.
On orthogonality preserving quadratic stochastic operators
International Nuclear Information System (INIS)
Mukhamedov, Farrukh; Taha, Muhammad Hafizuddin Mohd
2015-01-01
A quadratic stochastic operator (in short QSO) is usually used to present the time evolution of differing species in biology. Some quadratic stochastic operators have been studied by Lotka and Volterra. In the present paper, we first give a simple characterization of Volterra QSO in terms of absolutely continuity of discrete measures. Further, we introduce a notion of orthogonal preserving QSO, and describe such kind of operators defined on two dimensional simplex. It turns out that orthogonal preserving QSOs are permutations of Volterra QSO. The associativity of genetic algebras generated by orthogonal preserving QSO is studied too
Non-Orthogonal Opportunistic Beamforming: Performance Analysis and Implementation
Xia, Minghua; Wu, Yik-Chung; Aissa, Sonia
2012-01-01
be successfully served within a single transmission, non-orthogonal OBF can be applied to obtain lower worst-case delay among the users. On the other hand, if user traffic is heavy, non-orthogonal OBF is inferior to orthogonal OBF in terms of sum-rate and packet
Interlacing of zeros of quasi-orthogonal meixner polynomials | Driver ...
African Journals Online (AJOL)
... interlacing of zeros of quasi-orthogonal Meixner polynomials Mn(x;β; c) with the zeros of their nearest orthogonal counterparts Mt(x;β + k; c), l; n ∈ ℕ, k ∈ {1; 2}; is also discussed. Mathematics Subject Classication (2010): 33C45, 42C05. Key words: Discrete orthogonal polynomials, quasi-orthogonal polynomials, Meixner
Non-Archimedean analogues of orthogonal and symmetric operators
International Nuclear Information System (INIS)
Albeverio, S; Bayod, J M; Perez-Garsia, C; Khrennikov, A Yu; Cianci, R
1999-01-01
We study orthogonal and symmetric operators on non-Archimedean Hilbert spaces in connection with the p-adic quantization. This quantization describes measurements with finite precision. Symmetric (bounded) operators on p-adic Hilbert spaces represent physical observables. We study the spectral properties of one of the most important quantum operators, namely, the position operator (which is represented on p-adic Hilbert L 2 -space with respect to the p-adic Gaussian measure). Orthogonal isometric isomorphisms of p-adic Hilbert spaces preserve the precision of measurements. We study properties of orthogonal operators. It is proved that every orthogonal operator on non-Archimedean Hilbert space is continuous. However, there are discontinuous operators with dense domain of definition that preserve the inner product. There exist non-isometric orthogonal operators. We describe some classes of orthogonal isometric operators on finite-dimensional spaces. We study some general questions in the theory of non-Archimedean Hilbert spaces (in particular, general connections between the topology, norm and inner product)
Pairwise structure alignment specifically tuned for surface pockets and interaction interfaces
Cui, Xuefeng
2015-09-09
To detect and evaluate the similarities between the three-dimensional (3D) structures of two molecules, various kinds of methods have been proposed for the pairwise structure alignment problem [6, 9, 7, 11]. The problem plays important roles when studying the function and the evolution of biological molecules. Recently, pairwise structure alignment methods have been extended and applied on surface pocket structures [10, 3, 5] and interaction interface structures [8, 4]. The results show that, even when there are no global similarities discovered between the global sequences and the global structures, biological molecules or complexes could share similar functions because of well conserved pockets and interfaces. Thus, pairwise pocket and interface structure alignments are promising to unveil such shared functions that cannot be discovered by the well-studied global sequence and global structure alignments. State-of-the-art methods for pairwise pocket and interface structure alignments [4, 5] are direct extensions of the classic pairwise protein structure alignment methods, and thus such methods share a few limitations. First, the goal of the classic protein structure alignment methods is to align single-chain protein structures (i.e., a single fragment of residues connected by peptide bonds). However, we observed that pockets and interfaces tend to consist of tens of extremely short backbone fragments (i.e., three or fewer residues connected by peptide bonds). Thus, existing pocket and interface alignment methods based on the protein structure alignment methods still rely on the existence of long-enough backbone fragments, and the fragmentation issue of pockets and interfaces rises the risk of missing the optimal alignments. Moreover, existing interface structure alignment methods focus on protein-protein interfaces, and require a "blackbox preprocessing" before aligning protein-DNA and protein-RNA interfaces. Therefore, we introduce the PROtein STucture Alignment
Heo, Muyoung; Kim, Suhkmann; Moon, Eun-Joung; Cheon, Mookyung; Chung, Kwanghoon; Chang, Iksoo
2005-07-01
Although a coarse-grained description of proteins is a simple and convenient way to attack the protein folding problem, the construction of a global pairwise energy function which can simultaneously recognize the native folds of many proteins has resulted in partial success. We have sought the possibility of a systematic improvement of this pairwise-contact energy function as we extended the parameter space of amino acids, incorporating local environments of amino acids, beyond a 20×20 matrix. We have studied the pairwise contact energy functions of 20×20 , 60×60 , and 180×180 matrices depending on the extent of parameter space, and compared their effect on the learnability of energy parameters in the context of a gapless threading, bearing in mind that a 20×20 pairwise contact matrix has been shown to be too simple to recognize the native folds of many proteins. In this paper, we show that the construction of a global pairwise energy function was achieved using 1006 training proteins of a homology of less than 30%, which include all representatives of different protein classes. After parametrizing the local environments of the amino acids into nine categories depending on three secondary structures and three kinds of hydrophobicity (desolvation), the 16290 pairwise contact energies (scores) of the amino acids could be determined by perceptron learning and protein threading. These could simultaneously recognize all the native folds of the 1006 training proteins. When these energy parameters were tested on the 382 test proteins of a homology of less than 90%, 370 (96.9%) proteins could recognize their native folds. We set up a simple thermodynamic framework in the conformational space of decoys to calculate the unfolded fraction and the specific heat of real proteins. The different thermodynamic stabilities of E.coli ribonuclease H (RNase H) and its mutants were well described in our calculation, agreeing with the experiment.
Hypergeometric series recurrence relations and some new orthogonal functions
International Nuclear Information System (INIS)
Wilson, J.A.
1978-01-01
A set of hypergeometric orthogonal polynomials, a set of biorthogonal rational functions generalizing them, and some new three-term relations for hypergeometric series containing properties of these functions are exhibited. The orthogonal polynomials depend on four free parameters, and their orthogonality relations include as special or limiting cases the orthogonalities for the classical polynomials, the Hahn and dual Hahn polynomials, Pollaczek's polynomials orthogonal on an infinite interval, and the 6-j symbols of angular momentum in quantum mechanics. Their properties include a second-order difference equation and a Rodrigues-type formula involving a divided difference operator
Modeling of Particle Emission During Dry Orthogonal Cutting
Khettabi, Riad; Songmene, Victor; Zaghbani, Imed; Masounave, Jacques
2010-08-01
Because of the risks associated with exposure to metallic particles, efforts are being put into controlling and reducing them during the metal working process. Recent studies by the authors involved in this project have presented the effects of cutting speeds, workpiece material, and tool geometry on particle emission during dry machining; the authors have also proposed a new parameter, named the dust unit ( D u), for use in evaluating the quantity of particle emissions relative to the quantity of chips produced during a machining operation. In this study, a model for predicting the particle emission (dust unit) during orthogonal turning is proposed. This model, which is based on the energy approach combined with the microfriction and the plastic deformation of the material, takes into account the tool geometry, the properties of the worked material, the cutting conditions, and the chip segmentation. The model is validated using experimental results obtained during the orthogonal turning of 6061-T6 aluminum alloy, AISI 1018, AISI 4140 steels, and grey cast iron. A good agreement was found with experimental results. This model can help in designing strategies for reducing particle emission during machining processes, at the source.
Power and sample-size estimation for microbiome studies using pairwise distances and PERMANOVA
Kelly, Brendan J.; Gross, Robert; Bittinger, Kyle; Sherrill-Mix, Scott; Lewis, James D.; Collman, Ronald G.; Bushman, Frederic D.; Li, Hongzhe
2015-01-01
Motivation: The variation in community composition between microbiome samples, termed beta diversity, can be measured by pairwise distance based on either presence–absence or quantitative species abundance data. PERMANOVA, a permutation-based extension of multivariate analysis of variance to a matrix of pairwise distances, partitions within-group and between-group distances to permit assessment of the effect of an exposure or intervention (grouping factor) upon the sampled microbiome. Within-...
Orthogonal polarization in lasers physical phenomena and engineering applications
Zhang, Shulian
2013-01-01
This practical book summarizes the latest research results of orthogonally polarized lasers, birefringence laser cavities, and their applications. Coverage ranges from basic principles and technologies to the characteristics of different cavities and lasers to various measurement techniques. A number of figures, experimental designs, and measurement curves are included, helping readers gain a thorough understanding of the many applications in modern engineering and start their own projects. Many types of relevant lasers (Helium/Neon lasers, Nd:YAG lasers, laser diodes, etc.) are also discussed
An introduction to orthogonal polynomials
Chihara, Theodore S
1978-01-01
Assuming no further prerequisites than a first undergraduate course in real analysis, this concise introduction covers general elementary theory related to orthogonal polynomials. It includes necessary background material of the type not usually found in the standard mathematics curriculum. Suitable for advanced undergraduate and graduate courses, it is also appropriate for independent study. Topics include the representation theorem and distribution functions, continued fractions and chain sequences, the recurrence formula and properties of orthogonal polynomials, special functions, and some
Pairwise Trajectory Management (PTM): Concept Description and Documentation
Jones, Kenneth M.; Graff, Thomas J.; Carreno, Victor; Chartrand, Ryan C.; Kibler, Jennifer L.
2018-01-01
Pairwise Trajectory Management (PTM) is an Interval Management (IM) concept that utilizes airborne and ground-based capabilities to enable the implementation of airborne pairwise spacing capabilities in oceanic regions. The goal of PTM is to use airborne surveillance and tools to manage an "at or greater than" inter-aircraft spacing. Due to the accuracy of Automatic Dependent Surveillance-Broadcast (ADS-B) information and the use of airborne spacing guidance, the minimum PTM spacing distance will be less than distances a controller can support with current automation systems that support oceanic operations. Ground tools assist the controller in evaluating the traffic picture and determining appropriate PTM clearances to be issued. Avionics systems provide guidance information that allows the flight crew to conform to the PTM clearance issued by the controller. The combination of a reduced minimum distance and airborne spacing management will increase the capacity and efficiency of aircraft operations at a given altitude or volume of airspace. This document provides an overview of the proposed application, a description of several key scenarios, a high level discussion of expected air and ground equipment and procedure changes, a description of a NASA human-machine interface (HMI) prototype for the flight crew that would support PTM operations, and initial benefits analysis results. Additionally, included as appendices, are the following documents: the PTM Operational Services and Environment Definition (OSED) document and a companion "Future Considerations for the Pairwise Trajectory Management (PTM) Concept: Potential Future Updates for the PTM OSED" paper, a detailed description of the PTM algorithm and PTM Limit Mach rules, initial PTM safety requirements and safety assessment documents, a detailed description of the design, development, and initial evaluations of the proposed flight crew HMI, an overview of the methodology and results of PTM pilot training
Many-body orthogonal polynomial systems
International Nuclear Information System (INIS)
Witte, N.S.
1997-03-01
The fundamental methods employed in the moment problem, involving orthogonal polynomial systems, the Lanczos algorithm, continued fraction analysis and Pade approximants has been combined with a cumulant approach and applied to the extensive many-body problem in physics. This has yielded many new exact results for many-body systems in the thermodynamic limit - for the ground state energy, for excited state gaps, for arbitrary ground state avenges - and are of a nonperturbative nature. These results flow from a confluence property of the three-term recurrence coefficients arising and define a general class of many-body orthogonal polynomials. These theorems constitute an analytical solution to the Lanczos algorithm in that they are expressed in terms of the three-term recurrence coefficients α and β. These results can also be applied approximately for non-solvable models in the form of an expansion, in a descending series of the system size. The zeroth order order this expansion is just the manifestation of the central limit theorem in which a Gaussian measure and hermite polynomials arise. The first order represents the first non-trivial order, in which classical distribution functions like the binomial distributions arise and the associated class of orthogonal polynomials are Meixner polynomials. Amongst examples of systems which have infinite order in the expansion are q-orthogonal polynomials where q depends on the system size in a particular way. (author)
Revision of Begomovirus taxonomy based on pairwise sequence comparisons
Brown, Judith K.; Zerbini, F. Murilo; Navas-Castillo, Jesú s; Moriones, Enrique; Ramos-Sobrinho, Roberto; Silva, José C. F.; Fiallo-Olivé , Elvira; Briddon, Rob W.; Herná ndez-Zepeda, Cecilia; Idris, Ali; Malathi, V. G.; Martin, Darren P.; Rivera-Bustamante, Rafael; Ueda, Shigenori; Varsani, Arvind
2015-01-01
Viruses of the genus Begomovirus (family Geminiviridae) are emergent pathogens of crops throughout the tropical and subtropical regions of the world. By virtue of having a small DNA genome that is easily cloned, and due to the recent innovations in cloning and low-cost sequencing, there has been a dramatic increase in the number of available begomovirus genome sequences. Even so, most of the available sequences have been obtained from cultivated plants and are likely a small and phylogenetically unrepresentative sample of begomovirus diversity, a factor constraining taxonomic decisions such as the establishment of operationally useful species demarcation criteria. In addition, problems in assigning new viruses to established species have highlighted shortcomings in the previously recommended mechanism of species demarcation. Based on the analysis of 3,123 full-length begomovirus genome (or DNA-A component) sequences available in public databases as of December 2012, a set of revised guidelines for the classification and nomenclature of begomoviruses are proposed. The guidelines primarily consider a) genus-level biological characteristics and b) results obtained using a standardized classification tool, Sequence Demarcation Tool, which performs pairwise sequence alignments and identity calculations. These guidelines are consistent with the recently published recommendations for the genera Mastrevirus and Curtovirus of the family Geminiviridae. Genome-wide pairwise identities of 91 % and 94 % are proposed as the demarcation threshold for begomoviruses belonging to different species and strains, respectively. Procedures and guidelines are outlined for resolving conflicts that may arise when assigning species and strains to categories wherever the pairwise identity falls on or very near the demarcation threshold value.
Revision of Begomovirus taxonomy based on pairwise sequence comparisons
Brown, Judith K.
2015-04-18
Viruses of the genus Begomovirus (family Geminiviridae) are emergent pathogens of crops throughout the tropical and subtropical regions of the world. By virtue of having a small DNA genome that is easily cloned, and due to the recent innovations in cloning and low-cost sequencing, there has been a dramatic increase in the number of available begomovirus genome sequences. Even so, most of the available sequences have been obtained from cultivated plants and are likely a small and phylogenetically unrepresentative sample of begomovirus diversity, a factor constraining taxonomic decisions such as the establishment of operationally useful species demarcation criteria. In addition, problems in assigning new viruses to established species have highlighted shortcomings in the previously recommended mechanism of species demarcation. Based on the analysis of 3,123 full-length begomovirus genome (or DNA-A component) sequences available in public databases as of December 2012, a set of revised guidelines for the classification and nomenclature of begomoviruses are proposed. The guidelines primarily consider a) genus-level biological characteristics and b) results obtained using a standardized classification tool, Sequence Demarcation Tool, which performs pairwise sequence alignments and identity calculations. These guidelines are consistent with the recently published recommendations for the genera Mastrevirus and Curtovirus of the family Geminiviridae. Genome-wide pairwise identities of 91 % and 94 % are proposed as the demarcation threshold for begomoviruses belonging to different species and strains, respectively. Procedures and guidelines are outlined for resolving conflicts that may arise when assigning species and strains to categories wherever the pairwise identity falls on or very near the demarcation threshold value.
A novel orthogonally linearly polarized Nd:YVO4 laser
International Nuclear Information System (INIS)
Xing-Peng, Yan; Qiang, Liu; Hai-Long, Chen; Xing, Fu; Ma-Li, Gong; Dong-Sheng, Wang
2010-01-01
We presented a novel orthogonally linearly polarized Nd:YVO 4 laser. Two pieces of α-cut grown-together composite YVO 4 /Nd:YVO 4 crystals were placed in the resonant cavity with the c-axis of the two crystals orthogonally. The polarization and power performance of the orthogonally polarized laser were investigated. A 26.2-W orthogonally linearly polarized laser was obtained. The power ratio between the two orthogonally polarized lasers was varied with the pump power caused by the polarized mode coupling. The longitudinal modes competition and the corresponding variable optical beats were also observed from the orthogonally polarized laser. We also adjusted the crystals with their c-axis parallele to each other, and a 40.7-W linearly polarized TEM 00 laser was obtained, and the beam quality factors were M x 2 = 1.37 and M y 2 = 1.25. (classical areas of phenomenology)
Sign patterns of J-orthogonal matrices
Czech Academy of Sciences Publication Activity Database
Hall, F.J.; Li, Z.; Parnass, C.; Rozložník, Miroslav
2017-01-01
Roč. 5, č. 1 (2017), s. 225-241 ISSN 2300-7451 Institutional support: RVO:67985840 Keywords : G-matrix * J-orthogonal matrix * sign pattern matrix * sign patterns that allow J-orthogonality Subject RIV: BA - General Mathematics OBOR OECD: Applied mathematics https://www.degruyter.com/view/j/spma.2017.5.issue-1/spma-2017-0016/spma-2017-0016.xml?format=INT
Sign patterns of J-orthogonal matrices
Czech Academy of Sciences Publication Activity Database
Hall, F.J.; Li, Z.; Parnass, C.; Rozložník, Miroslav
2017-01-01
Roč. 5, č. 1 (2017), s. 225-241 ISSN 2300-7451 Institutional support: RVO:67985840 Keywords : G-matrix * J-orthogonal matrix * sign pattern matrix * sign patterns that allow J-orthogonality Subject RIV: BA - General Mathematics OBOR OECD: Applied mathematics https://www.degruyter.com/view/j/spma.2017.5.issue-1/spma-2017-0016/spma-2017-0016. xml ?format=INT
Effective Results Analysis for the Similar Software Products’ Orthogonality
Directory of Open Access Journals (Sweden)
Ion Ivan
2009-10-01
Full Text Available It is defined the concept of similar software. There are established conditions of archiving the software components. It is carried out the orthogonality evaluation and the correlation between the orthogonality and the complexity of the homogenous software components is analyzed. Shall proceed to build groups of similar software products, belonging to the orthogonality intervals. There are presented in graphical form the results of the analysis. There are detailed aspects of the functioning of the software product allocated for the orthogonality.
Non-Orthogonal Opportunistic Beamforming: Performance Analysis and Implementation
Xia, Minghua
2012-04-01
Aiming to achieve the sum-rate capacity in multi-user multi-antenna systems where $N_t$ antennas are implemented at the transmitter, opportunistic beamforming (OBF) generates~$N_t$ orthonormal beams and serves $N_t$ users during each channel use, which results in high scheduling delay over the users, especially in densely populated networks. Non-orthogonal OBF with more than~$N_t$ transmit beams can be exploited to serve more users simultaneously and further decrease scheduling delay. However, the inter-beam interference will inevitably deteriorate the sum-rate. Therefore, there is a tradeoff between sum-rate and scheduling delay for non-orthogonal OBF. In this context, system performance and implementation of non-orthogonal OBF with $N>N_t$ beams are investigated in this paper. Specifically, it is analytically shown that non-orthogonal OBF is an interference-limited system as the number of users $K \\\\to \\\\infty$. When the inter-beam interference reaches its minimum for fixed $N_t$ and~$N$, the sum-rate scales as $N\\\\ln\\\\left(\\\\frac{N}{N-N_t}\\ ight)$ and it degrades monotonically with the number of beams $N$ for fixed $N_t$. On the contrary, the average scheduling delay is shown to scale as $\\\\frac{1}{N}K\\\\ln{K}$ channel uses and it improves monotonically with $N$. Furthermore, two practical non-orthogonal beamforming schemes are explicitly constructed and they are demonstrated to yield the minimum inter-beam interference for fixed $N_t$ and $N$. This study reveals that, if user traffic is light and one user can be successfully served within a single transmission, non-orthogonal OBF can be applied to obtain lower worst-case delay among the users. On the other hand, if user traffic is heavy, non-orthogonal OBF is inferior to orthogonal OBF in terms of sum-rate and packet delay.
Symmetric functions and orthogonal polynomials
Macdonald, I G
1997-01-01
One of the most classical areas of algebra, the theory of symmetric functions and orthogonal polynomials has long been known to be connected to combinatorics, representation theory, and other branches of mathematics. Written by perhaps the most famous author on the topic, this volume explains some of the current developments regarding these connections. It is based on lectures presented by the author at Rutgers University. Specifically, he gives recent results on orthogonal polynomials associated with affine Hecke algebras, surveying the proofs of certain famous combinatorial conjectures.
Orthogonal Multi-Carrier DS-CDMA with Frequency-Domain Equalization
Tanaka, Ken; Tomeba, Hiromichi; Adachi, Fumiyuki
Orthogonal multi-carrier direct sequence code division multiple access (orthogonal MC DS-CDMA) is a combination of orthogonal frequency division multiplexing (OFDM) and time-domain spreading, while multi-carrier code division multiple access (MC-CDMA) is a combination of OFDM and frequency-domain spreading. In MC-CDMA, a good bit error rate (BER) performance can be achieved by using frequency-domain equalization (FDE), since the frequency diversity gain is obtained. On the other hand, the conventional orthogonal MC DS-CDMA fails to achieve any frequency diversity gain. In this paper, we propose a new orthogonal MC DS-CDMA that can obtain the frequency diversity gain by applying FDE. The conditional BER analysis is presented. The theoretical average BER performance in a frequency-selective Rayleigh fading channel is evaluated by the Monte-Carlo numerical computation method using the derived conditional BER and is confirmed by computer simulation of the orthogonal MC DS-CDMA signal transmission.
Skew-orthogonal polynomials and random matrix theory
Ghosh, Saugata
2009-01-01
Orthogonal polynomials satisfy a three-term recursion relation irrespective of the weight function with respect to which they are defined. This gives a simple formula for the kernel function, known in the literature as the Christoffel-Darboux sum. The availability of asymptotic results of orthogonal polynomials and the simple structure of the Christoffel-Darboux sum make the study of unitary ensembles of random matrices relatively straightforward. In this book, the author develops the theory of skew-orthogonal polynomials and obtains recursion relations which, unlike orthogonal polynomials, depend on weight functions. After deriving reduced expressions, called the generalized Christoffel-Darboux formulas (GCD), he obtains universal correlation functions and non-universal level densities for a wide class of random matrix ensembles using the GCD. The author also shows that once questions about higher order effects are considered (questions that are relevant in different branches of physics and mathematics) the ...
Improving prediction of heterodimeric protein complexes using combination with pairwise kernel.
Ruan, Peiying; Hayashida, Morihiro; Akutsu, Tatsuya; Vert, Jean-Philippe
2018-02-19
Since many proteins become functional only after they interact with their partner proteins and form protein complexes, it is essential to identify the sets of proteins that form complexes. Therefore, several computational methods have been proposed to predict complexes from the topology and structure of experimental protein-protein interaction (PPI) network. These methods work well to predict complexes involving at least three proteins, but generally fail at identifying complexes involving only two different proteins, called heterodimeric complexes or heterodimers. There is however an urgent need for efficient methods to predict heterodimers, since the majority of known protein complexes are precisely heterodimers. In this paper, we use three promising kernel functions, Min kernel and two pairwise kernels, which are Metric Learning Pairwise Kernel (MLPK) and Tensor Product Pairwise Kernel (TPPK). We also consider the normalization forms of Min kernel. Then, we combine Min kernel or its normalization form and one of the pairwise kernels by plugging. We applied kernels based on PPI, domain, phylogenetic profile, and subcellular localization properties to predicting heterodimers. Then, we evaluate our method by employing C-Support Vector Classification (C-SVC), carrying out 10-fold cross-validation, and calculating the average F-measures. The results suggest that the combination of normalized-Min-kernel and MLPK leads to the best F-measure and improved the performance of our previous work, which had been the best existing method so far. We propose new methods to predict heterodimers, using a machine learning-based approach. We train a support vector machine (SVM) to discriminate interacting vs non-interacting protein pairs, based on informations extracted from PPI, domain, phylogenetic profiles and subcellular localization. We evaluate in detail new kernel functions to encode these data, and report prediction performance that outperforms the state-of-the-art.
Czech Academy of Sciences Publication Activity Database
Rozložník, Miroslav; Okulicka-Dłużewska, F.; Smoktunowicz, A.
2015-01-01
Roč. 36, č. 2 (2015), s. 727-751 ISSN 0895-4798 R&D Projects: GA ČR(CZ) GAP108/11/0853 Institutional support: RVO:67985807 Keywords : symmetric indefinite matrices * Cholesky-like factorization * orthogonalization techniques * indefinite bilinear forms * Gram-Schmidt process * rounding error analysis Subject RIV: BA - General Mathematics Impact factor: 1.883, year: 2015
On Orthogonal Decomposition of a Sobolev Space
Lakew, Dejenie A.
2016-01-01
The theme of this short article is to investigate an orthogonal decomposition of a Sobolev space and look at some properties of the inner product therein and the distance defined from the inner product. We also determine the dimension of the orthogonal difference space and show the expansion of spaces as their regularity increases.
Determinants of sovereign debt yield spreads under EMU: Pairwise approach
Fazlioglu, S.
2013-01-01
This study aims at providing an empirical analysis of long-term determinants of sovereign debt yield spreads under European EMU (Economic and Monetary Union) through pairwise approach within panel framework. Panel gravity models are increasingly used in the cross-market correlation literature while
Hung, Yu-Han; Tseng, Chin-Hao; Hwang, Sheng-Kwang
2018-06-01
This Letter investigates an optically injected semiconductor laser for conversion from non-orthogonally to orthogonally polarized optical single-sideband modulation. The underlying mechanism relies solely on nonlinear laser characteristics and, thus, only a typical semiconductor laser is required as the key conversion unit. This conversion can be achieved for a broadly tunable frequency range up to at least 65 GHz. After conversion, the microwave phase quality, including linewidth and phase noise, is mostly preserved, and simultaneous microwave amplification up to 23 dB is feasible.
Classification between normal and tumor tissues based on the pair-wise gene expression ratio
International Nuclear Information System (INIS)
Yap, YeeLeng; Zhang, XueWu; Ling, MT; Wang, XiangHong; Wong, YC; Danchin, Antoine
2004-01-01
Precise classification of cancer types is critically important for early cancer diagnosis and treatment. Numerous efforts have been made to use gene expression profiles to improve precision of tumor classification. However, reliable cancer-related signals are generally lacking. Using recent datasets on colon and prostate cancer, a data transformation procedure from single gene expression to pair-wise gene expression ratio is proposed. Making use of the internal consistency of each expression profiling dataset this transformation improves the signal to noise ratio of the dataset and uncovers new relevant cancer-related signals (features). The efficiency in using the transformed dataset to perform normal/tumor classification was investigated using feature partitioning with informative features (gene annotation) as discriminating axes (single gene expression or pair-wise gene expression ratio). Classification results were compared to the original datasets for up to 10-feature model classifiers. 82 and 262 genes that have high correlation to tissue phenotype were selected from the colon and prostate datasets respectively. Remarkably, data transformation of the highly noisy expression data successfully led to lower the coefficient of variation (CV) for the within-class samples as well as improved the correlation with tissue phenotypes. The transformed dataset exhibited lower CV when compared to that of single gene expression. In the colon cancer set, the minimum CV decreased from 45.3% to 16.5%. In prostate cancer, comparable CV was achieved with and without transformation. This improvement in CV, coupled with the improved correlation between the pair-wise gene expression ratio and tissue phenotypes, yielded higher classification efficiency, especially with the colon dataset – from 87.1% to 93.5%. Over 90% of the top ten discriminating axes in both datasets showed significant improvement after data transformation. The high classification efficiency achieved suggested
Volume-of-fluid algorithm on a non-orthogonal grid
International Nuclear Information System (INIS)
Jang, W.; Lien, F.S.; Ji, H.
2005-01-01
In the present study, a novel VOF method on a non-orthogonal grid is proposed and tested for several benchmark problems, including a simple translation test, a reversed single vortex flow and a shearing flow, with the objective to demonstrate the feasibility and accuracy of the present approach. Excellent agreement between the solutions obtained on both orthogonal and non-orthogonal meshes is achieved. The sensitivity of various methods to the L 1 error in evaluating the interface normal and volume flux at each face of a non-orthogonal cell is examined. Time integration methods based on the operator-splitting approach in curvilinear coordinates, including the explicit-implicit (EX-IM) and explicit-explicit (EX-EX) combinations, are tested. (author)
Orthogonality catastrophe and fractional exclusion statistics
Ares, Filiberto; Gupta, Kumar S.; de Queiroz, Amilcar R.
2018-02-01
We show that the N -particle Sutherland model with inverse-square and harmonic interactions exhibits orthogonality catastrophe. For a fixed value of the harmonic coupling, the overlap of the N -body ground state wave functions with two different values of the inverse-square interaction term goes to zero in the thermodynamic limit. When the two values of the inverse-square coupling differ by an infinitesimal amount, the wave function overlap shows an exponential suppression. This is qualitatively different from the usual power law suppression observed in the Anderson's orthogonality catastrophe. We also obtain an analytic expression for the wave function overlaps for an arbitrary set of couplings, whose properties are analyzed numerically. The quasiparticles constituting the ground state wave functions of the Sutherland model are known to obey fractional exclusion statistics. Our analysis indicates that the orthogonality catastrophe may be valid in systems with more general kinds of statistics than just the fermionic type.
Czech Academy of Sciences Publication Activity Database
Liesen, J.; Strakoš, Zdeněk
2008-01-01
Roč. 50, č. 3 (2008), s. 485-503 ISSN 0036-1445 R&D Projects: GA AV ČR 1ET400300415; GA AV ČR IAA100300802 Institutional research plan: CEZ:AV0Z10300504 Keywords : Krylov subspace methods * orthogonal bases * short reccurences * conjugate gradient -like methods Subject RIV: IN - Informatics, Computer Science Impact factor: 2.739, year: 2008
Effective Results Analysis for the Similar Software Products’ Orthogonality
Ion Ivan; Daniel Milodin
2009-01-01
It is defined the concept of similar software. There are established conditions of archiving the software components. It is carried out the orthogonality evaluation and the correlation between the orthogonality and the complexity of the homogenous software components is analyzed. Shall proceed to build groups of similar software products, belonging to the orthogonality intervals. There are presented in graphical form the results of the analysis. There are detailed aspects of the functioning o...
Representations for the extreme zeros of orthogonal polynomials
van Doorn, Erik A.; van Foreest, Nicky D.; Zeifman, Alexander I.
2009-01-01
We establish some representations for the smallest and largest zeros of orthogonal polynomials in terms of the parameters in the three-terms recurrence relation. As a corollary we obtain representations for the endpoints of the true interval of orthogonality. Implications of these results for the
Processing of dual-orthogonal cw polarimetric radar signals
Babur, G.
2009-01-01
The thesis consists of two parts. The first part is devoted to the theory of dual-orthogonal polarimetric radar signals with continuous waveforms. The thesis presents a comparison of the signal compression techniques, namely correlation and de-ramping methods, for the dual-orthogonal sophisticated
Pairwise harmonics for shape analysis
Zheng, Youyi
2013-07-01
This paper introduces a simple yet effective shape analysis mechanism for geometry processing. Unlike traditional shape analysis techniques which compute descriptors per surface point up to certain neighborhoods, we introduce a shape analysis framework in which the descriptors are based on pairs of surface points. Such a pairwise analysis approach leads to a new class of shape descriptors that are more global, discriminative, and can effectively capture the variations in the underlying geometry. Specifically, we introduce new shape descriptors based on the isocurves of harmonic functions whose global maximum and minimum occur at the point pair. We show that these shape descriptors can infer shape structures and consistently lead to simpler and more efficient algorithms than the state-of-the-art methods for three applications: intrinsic reflectional symmetry axis computation, matching shape extremities, and simultaneous surface segmentation and skeletonization. © 2012 IEEE.
Orthogonal Coupling in Cavity BPM with Slots
Lipka, D; Siemens, M; Vilcins, S; Caspers, Friedhelm; Stadler, M; Treyer, DM; Maesaka, H; Shintake, T
2009-01-01
XFELs require high precision orbit control in their long undulator sections. Due to the pulsed operation of drive linacs the high precision has to be reached by single bunch measurements. So far only cavity BPMs achieve the required performance and will be used at the European XFEL, one between each of the up to 116 undulators. Coupling between the orthogonal planes limits the performance of beam position measurements. A first prototype build at DESY shows a coupling between orthogonal planes of about -20 dB, but the requirement is lower than -40 dB (1%). The next generation cavity BPM was build with tighter tolerances and mechanical changes, the orthogonal coupling is measured to be lower than -43 dB. This report discusses the various observations, measurements and improvements which were done.
Discriminants and functional equations for polynomials orthogonal on the unit circle
International Nuclear Information System (INIS)
Ismail, M.E.H.; Witte, N.S.
2000-01-01
We derive raising and lowering operators for orthogonal polynomials on the unit circle and find second order differential and q-difference equations for these polynomials. A general functional equation is found which allows one to relate the zeros of the orthogonal polynomials to the stationary values of an explicit quasi-energy and implies recurrences on the orthogonal polynomial coefficients. We also evaluate the discriminants and quantized discriminants of polynomials orthogonal on the unit circle
Filippi, Sarah; Holmes, Chris C; Nieto-Barajas, Luis E
2016-11-16
In this article we propose novel Bayesian nonparametric methods using Dirichlet Process Mixture (DPM) models for detecting pairwise dependence between random variables while accounting for uncertainty in the form of the underlying distributions. A key criteria is that the procedures should scale to large data sets. In this regard we find that the formal calculation of the Bayes factor for a dependent-vs.-independent DPM joint probability measure is not feasible computationally. To address this we present Bayesian diagnostic measures for characterising evidence against a "null model" of pairwise independence. In simulation studies, as well as for a real data analysis, we show that our approach provides a useful tool for the exploratory nonparametric Bayesian analysis of large multivariate data sets.
Generalized Pseudospectral Method and Zeros of Orthogonal Polynomials
Directory of Open Access Journals (Sweden)
Oksana Bihun
2018-01-01
Full Text Available Via a generalization of the pseudospectral method for numerical solution of differential equations, a family of nonlinear algebraic identities satisfied by the zeros of a wide class of orthogonal polynomials is derived. The generalization is based on a modification of pseudospectral matrix representations of linear differential operators proposed in the paper, which allows these representations to depend on two, rather than one, sets of interpolation nodes. The identities hold for every polynomial family pνxν=0∞ orthogonal with respect to a measure supported on the real line that satisfies some standard assumptions, as long as the polynomials in the family satisfy differential equations Apν(x=qν(xpν(x, where A is a linear differential operator and each qν(x is a polynomial of degree at most n0∈N; n0 does not depend on ν. The proposed identities generalize known identities for classical and Krall orthogonal polynomials, to the case of the nonclassical orthogonal polynomials that belong to the class described above. The generalized pseudospectral representations of the differential operator A for the case of the Sonin-Markov orthogonal polynomials, also known as generalized Hermite polynomials, are presented. The general result is illustrated by new algebraic relations satisfied by the zeros of the Sonin-Markov polynomials.
A gradient approximation for calculating Debye temperatures from pairwise interatomic potentials
International Nuclear Information System (INIS)
Jackson, D.P.
1975-09-01
A simple gradient approximation is given for calculating the effective Debye temperature of a cubic crystal from central pairwise interatomic potentials. For examples of the Morse potential applied to cubic metals the results are in generally good agreement with experiment. (author)
Orthogonal serialisation for Haskell
DEFF Research Database (Denmark)
Berthold, Jost
2010-01-01
support for parallel Haskell on distributed memory platforms. This serialisation has highly desirable and so-far unrivalled properties: it is truly orthogonal to evaluation and also does not require any type class mechanisms. Especially, (almost) any kind of value can be serialised, including functions...
Orthogonal sparse linear discriminant analysis
Liu, Zhonghua; Liu, Gang; Pu, Jiexin; Wang, Xiaohong; Wang, Haijun
2018-03-01
Linear discriminant analysis (LDA) is a linear feature extraction approach, and it has received much attention. On the basis of LDA, researchers have done a lot of research work on it, and many variant versions of LDA were proposed. However, the inherent problem of LDA cannot be solved very well by the variant methods. The major disadvantages of the classical LDA are as follows. First, it is sensitive to outliers and noises. Second, only the global discriminant structure is preserved, while the local discriminant information is ignored. In this paper, we present a new orthogonal sparse linear discriminant analysis (OSLDA) algorithm. The k nearest neighbour graph is first constructed to preserve the locality discriminant information of sample points. Then, L2,1-norm constraint on the projection matrix is used to act as loss function, which can make the proposed method robust to outliers in data points. Extensive experiments have been performed on several standard public image databases, and the experiment results demonstrate the performance of the proposed OSLDA algorithm.
Energy Technology Data Exchange (ETDEWEB)
Kim, J [Samsung Medical Center, Seoul (Korea, Republic of); Park, C [University of Florida Health Science Center, Gainesville, FL (United States); Kauweloa, K [UTHSCSA, San Antonio, TX (United States); Chung, Y; Han, Y [Sungkyunkwan University School of Medicine, Seoul (Korea, Republic of); Ju, S [Samsung Medical Center, Seoul, Seoul (Korea, Republic of)
2015-06-15
Purpose: As an alternative to full tomographic imaging technique such as cone-beam computed tomography (CBCT), there is growing interest to adopt digital tomosynthesis (DTS) for the use of diagnostic as well as therapeutic applications. The aim of this study is to propose a new DTS system using novel orthogonal scanning technique, which can provide superior image quality DTS images compared to the conventional DTS scanning system. Methods: Unlike conventional DTS scanning system, the proposed DTS is reconstructed with two sets of orthogonal patient scans. 1) X-ray projections that are acquired along transverse trajectory and 2) an additional sets of X-ray projections acquired along the vertical direction at the mid angle of the previous transverse scan. To reconstruct DTS, we have used modified filtered backprojection technique to account for the different scanning directions of each projection set. We have evaluated the performance of our method using numerical planning CT data of liver cancer patient and a physical pelvis phantom experiment. The results were compared with conventional DTS techniques with single transverse and vertical scanning. Results: The experiments on both numerical simulation as well as physical experiment showed that the resolution as well as contrast of anatomical structures was much clearer using our method. Specifically, the image quality comparing with transversely scanned DTS showed that the edge and contrast of anatomical structures along Left-Right (LR) directions was comparable however, considerable discrepancy and enhancement could be observed along Superior-Inferior (SI) direction using our method. The opposite was observed when vertically scanned DTS was compared. Conclusion: In this study, we propose a novel DTS system using orthogonal scanning technique. The results indicated that the image quality of our novel DTS system was superior compared to conventional DTS system. This makes our DTS system potentially useful in various
Decomposition of orthogonal polygons in a set of rectanglеs
Shestakov, E.; Voronov, A.
2009-01-01
Algorithm for covering orthogonal integrated circuit layout objects is considered. Objects of the research are special single-connected orthogonal polygons which are generated during decomposition of any multiply connected polygon in a set of single-connected orthogonal polygons. Developed algorithm for covering polygons based on the mathematical techinque of logic matrix transformation. Results described in this paper, can be applied in computer geometry and image analysis.
A Dynamic BI–Orthogonal Field Equation Approach to Efficient Bayesian Inversion
Directory of Open Access Journals (Sweden)
Tagade Piyush M.
2017-06-01
Full Text Available This paper proposes a novel computationally efficient stochastic spectral projection based approach to Bayesian inversion of a computer simulator with high dimensional parametric and model structure uncertainty. The proposed method is based on the decomposition of the solution into its mean and a random field using a generic Karhunen-Loève expansion. The random field is represented as a convolution of separable Hilbert spaces in stochastic and spatial dimensions that are spectrally represented using respective orthogonal bases. In particular, the present paper investigates generalized polynomial chaos bases for the stochastic dimension and eigenfunction bases for the spatial dimension. Dynamic orthogonality is used to derive closed-form equations for the time evolution of mean, spatial and the stochastic fields. The resultant system of equations consists of a partial differential equation (PDE that defines the dynamic evolution of the mean, a set of PDEs to define the time evolution of eigenfunction bases, while a set of ordinary differential equations (ODEs define dynamics of the stochastic field. This system of dynamic evolution equations efficiently propagates the prior parametric uncertainty to the system response. The resulting bi-orthogonal expansion of the system response is used to reformulate the Bayesian inference for efficient exploration of the posterior distribution. The efficacy of the proposed method is investigated for calibration of a 2D transient diffusion simulator with an uncertain source location and diffusivity. The computational efficiency of the method is demonstrated against a Monte Carlo method and a generalized polynomial chaos approach.
Orthogonal Algorithm of Logic Probability and Syndrome-Testable Analysis
Institute of Scientific and Technical Information of China (English)
无
1990-01-01
A new method,orthogonal algoritm,is presented to compute the logic probabilities(i.e.signal probabilities)accurately,The transfer properties of logic probabilities are studied first,which are useful for the calculation of logic probability of the circuit with random independent inputs.Then the orthogonal algoritm is described to compute the logic probability of Boolean function realized by a combinational circuit.This algorithm can make Boolean function “ORTHOGONAL”so that the logic probabilities can be easily calculated by summing up the logic probabilities of all orthogonal terms of the Booleam function.
Bistability, non-ergodicity, and inhibition in pairwise maximum-entropy models.
Rostami, Vahid; Porta Mana, PierGianLuca; Grün, Sonja; Helias, Moritz
2017-10-01
Pairwise maximum-entropy models have been used in neuroscience to predict the activity of neuronal populations, given only the time-averaged correlations of the neuron activities. This paper provides evidence that the pairwise model, applied to experimental recordings, would produce a bimodal distribution for the population-averaged activity, and for some population sizes the second mode would peak at high activities, that experimentally would be equivalent to 90% of the neuron population active within time-windows of few milliseconds. Several problems are connected with this bimodality: 1. The presence of the high-activity mode is unrealistic in view of observed neuronal activity and on neurobiological grounds. 2. Boltzmann learning becomes non-ergodic, hence the pairwise maximum-entropy distribution cannot be found: in fact, Boltzmann learning would produce an incorrect distribution; similarly, common variants of mean-field approximations also produce an incorrect distribution. 3. The Glauber dynamics associated with the model is unrealistically bistable and cannot be used to generate realistic surrogate data. This bimodality problem is first demonstrated for an experimental dataset from 159 neurons in the motor cortex of macaque monkey. Evidence is then provided that this problem affects typical neural recordings of population sizes of a couple of hundreds or more neurons. The cause of the bimodality problem is identified as the inability of standard maximum-entropy distributions with a uniform reference measure to model neuronal inhibition. To eliminate this problem a modified maximum-entropy model is presented, which reflects a basic effect of inhibition in the form of a simple but non-uniform reference measure. This model does not lead to unrealistic bimodalities, can be found with Boltzmann learning, and has an associated Glauber dynamics which incorporates a minimal asymmetric inhibition.
Riemannian geometry in an orthogonal frame
Cartan, Elie Joseph
2001-01-01
Foreword by S S Chern. In 1926-27, Cartan gave a series of lectures in which he introduced exterior forms at the very beginning and used extensively orthogonal frames throughout to investigate the geometry of Riemannian manifolds. In this course he solved a series of problems in Euclidean and non-Euclidean spaces, as well as a series of variational problems on geodesics. In 1960, Sergei P Finikov translated from French into Russian his notes of these Cartan's lectures and published them as a book entitled Riemannian Geometry in an Orthogonal Frame. This book has many innovations, such as the n
Differential recurrence formulae for orthogonal polynomials
Directory of Open Access Journals (Sweden)
Anton L. W. von Bachhaus
1995-11-01
Full Text Available Part I - By combining a general 2nd-order linear homogeneous ordinary differential equation with the three-term recurrence relation possessed by all orthogonal polynomials, it is shown that sequences of orthogonal polynomials which satisfy a differential equation of the above mentioned type necessarily have a differentiation formula of the type: gn(xY'n(x=fn(xYn(x+Yn-1(x. Part II - A recurrence formula of the form: rn(xY'n(x+sn(xY'n+1(x+tn(xY'n-1(x=0, is derived using the result of Part I.
Extension of Pairwise Broadcast Clock Synchronization for Multicluster Sensor Networks
Directory of Open Access Journals (Sweden)
Bruce W. Suter
2008-01-01
Full Text Available Time synchronization is crucial for wireless sensor networks (WSNs in performing a number of fundamental operations such as data coordination, power management, security, and localization. The Pairwise Broadcast Synchronization (PBS protocol was recently proposed to minimize the number of timing messages required for global network synchronization, which enables the design of highly energy-efficient WSNs. However, PBS requires all nodes in the network to lie within the communication ranges of two leader nodes, a condition which might not be available in some applications. This paper proposes an extension of PBS to the more general class of sensor networks. Based on the hierarchical structure of the network, an energy-efficient pair selection algorithm is proposed to select the best pairwise synchronization sequence to reduce the overall energy consumption. It is shown that in a multicluster networking environment, PBS requires a far less number of timing messages than other well-known synchronization protocols and incurs no loss in synchronization accuracy. Moreover, the proposed scheme presents significant energy savings for densely deployed WSNs.
Orthogonalization of correlated states
International Nuclear Information System (INIS)
Fantoni, S.; Pandharipande, V.R.
1988-01-01
A scheme for orthogonalizing correlated states while preserving the diagonal matrix elements of the Hamiltonian is developed. Conventional perturbation theory can be used with the orthonormal correlated basis obtained from this scheme. Advantages of using orthonormal correlated states in calculations of the response function and correlation energy are discussed
Directory of Open Access Journals (Sweden)
Kae Y. Foo
2010-01-01
Full Text Available The task of localizing underwater assets involves the relative localization of each unit using only pairwise distance measurements, usually obtained from time-of-arrival or time-delay-of-arrival measurements. In the fluctuating underwater environment, a complete set of pair-wise distance measurements can often be difficult to acquire, thus hindering a straightforward closed-form solution in deriving the assets' relative coordinates. An iterative multidimensional scaling approach is presented based upon a weighted-majorization algorithm that tolerates missing or inaccurate distance measurements. Substantial modifications are proposed to optimize the algorithm, while the effects of refractive propagation paths are considered. A parametric study of the algorithm based upon simulation results is shown. An acoustic field-trial was then carried out, presenting field measurements to highlight the practical implementation of this algorithm.
Czech Academy of Sciences Publication Activity Database
Vejchodský, Tomáš; Šolín, Pavel
2008-01-01
Roč. 218, č. 1 (2008), s. 192-200 ISSN 0377-0427 R&D Projects: GA AV ČR IAA100760702; GA ČR GA102/05/0629; GA ČR(CZ) GA102/07/0496 Institutional research plan: CEZ:AV0Z10190503; CEZ:AV0Z20570509 Keywords : static condensation of internal degrees of freedom * orthogonalization * ILU preconditioning Subject RIV: BA - General Mathematics Impact factor: 1.048, year: 2008
Local copying of orthogonal entangled quantum states
International Nuclear Information System (INIS)
Anselmi, Fabio; Chefles, Anthony; Plenio, Martin B
2004-01-01
In classical information theory one can, in principle, produce a perfect copy of any input state. In quantum information theory, the no cloning theorem prohibits exact copying of non-orthogonal states. Moreover, if we wish to copy multiparticle entangled states and can perform only local operations and classical communication (LOCC), then further restrictions apply. We investigate the problem of copying orthogonal, entangled quantum states with an entangled blank state under the restriction to LOCC. Throughout, the subsystems have finite dimension D. We show that if all of the states to be copied are non-maximally entangled, then novel LOCC copying procedures based on entanglement catalysis are possible. We then study in detail the LOCC copying problem where both the blank state and at least one of the states to be copied are maximally entangled. For this to be possible, we find that all the states to be copied must be maximally entangled. We obtain a necessary and sufficient condition for LOCC copying under these conditions. For two orthogonal, maximally entangled states, we provide the general solution to this condition. We use it to show that for D = 2, 3, any pair of orthogonal, maximally entangled states can be locally copied using a maximally entangled blank state. However, we also show that for any D which is not prime, one can construct pairs of such states for which this is impossible
On some orthogonality properties of Maxwell's multipole vectors
International Nuclear Information System (INIS)
Gramada, Apostol
2007-01-01
We determine the location of the expansion points with respect to which the two Maxwell's multipole vectors of the quadrupole moment and the dipole vector of a distribution of charge form an orthogonal trihedron. We find that with respect to these 'orthogonality centres' both the dipole and the quadrupole moments are each characterized by a single real parameter. We further show that the orthogonality centres coincide with the stationary points of the magnitude of the quadrupole moment and, therefore, they can be seen as an extension of the concept of centre of the dipole moment of a neutral system introduced previously in the literature. The nature of the stationary points then provides the means for the classification of a distribution of charge in two different categories
Measuring pair-wise molecular interactions in a complex mixture
Chakraborty, Krishnendu; Varma, Manoj M.; Venkatapathi, Murugesan
2016-03-01
Complex biological samples such as serum contain thousands of proteins and other molecules spanning up to 13 orders of magnitude in concentration. Present measurement techniques do not permit the analysis of all pair-wise interactions between the components of such a complex mixture to a given target molecule. In this work we explore the use of nanoparticle tags which encode the identity of the molecule to obtain the statistical distribution of pair-wise interactions using their Localized Surface Plasmon Resonance (LSPR) signals. The nanoparticle tags are chosen such that the binding between two molecules conjugated to the respective nanoparticle tags can be recognized by the coupling of their LSPR signals. This numerical simulation is done by DDA to investigate this approach using a reduced system consisting of three nanoparticles (a gold ellipsoid with aspect ratio 2.5 and short axis 16 nm, and two silver ellipsoids with aspect ratios 3 and 2 and short axes 8 nm and 10 nm respectively) and the set of all possible dimers formed between them. Incident light was circularly polarized and all possible particle and dimer orientations were considered. We observed that minimum peak separation between two spectra is 5 nm while maximum is 184nm.
Loveday, J.; Christodoulou, L.; Norberg, P.; Peacock, J. A.; Baldry, I. K.; Bland-Hawthorn, J.; Brown, M. J. I.; Colless, M.; Driver, S. P.; Holwerda, B. W.; Hopkins, A. M.; Kafle, P. R.; Liske, J.; Lopez-Sanchez, A. R.; Taylor, E. N.
2018-03-01
The galaxy pairwise velocity dispersion (PVD) can provide important tests of non-standard gravity and galaxy formation models. We describe measurements of the PVD of galaxies in the Galaxy and Mass Assembly (GAMA) survey as a function of projected separation and galaxy luminosity. Due to the faint magnitude limit (r PVD to smaller scales (r⊥ = 0.01 h - 1 Mpc) than previous work. The measured PVD at projected separations r⊥ ≲ 1 h - 1 Mpc increases near monotonically with increasing luminosity from σ12 ≈ 200 km s - 1 at Mr = -17 mag to σ12 ≈ 600 km s - 1 at Mr ≈ -22 mag. Analysis of the Gonzalez-Perez et al. (2014) GALFORM semi-analytic model yields no such trend of PVD with luminosity: the model overpredicts the PVD for faint galaxies. This is most likely a result of the model placing too many low-luminosity galaxies in massive haloes.
Skew-orthogonal polynomials, differential systems and random matrix theory
International Nuclear Information System (INIS)
Ghosh, S.
2007-01-01
We study skew-orthogonal polynomials with respect to the weight function exp[-2V (x)], with V (x) = Σ K=1 2d (u K /K)x K , u 2d > 0, d > 0. A finite subsequence of such skew-orthogonal polynomials arising in the study of Orthogonal and Symplectic ensembles of random matrices, satisfy a system of differential-difference-deformation equation. The vectors formed by such subsequence has the rank equal to the degree of the potential in the quaternion sense. These solutions satisfy certain compatibility condition and hence admit a simultaneous fundamental system of solutions. (author)
Biogeography-Based Optimization with Orthogonal Crossover
Directory of Open Access Journals (Sweden)
Quanxi Feng
2013-01-01
Full Text Available Biogeography-based optimization (BBO is a new biogeography inspired, population-based algorithm, which mainly uses migration operator to share information among solutions. Similar to crossover operator in genetic algorithm, migration operator is a probabilistic operator and only generates the vertex of a hyperrectangle defined by the emigration and immigration vectors. Therefore, the exploration ability of BBO may be limited. Orthogonal crossover operator with quantization technique (QOX is based on orthogonal design and can generate representative solution in solution space. In this paper, a BBO variant is presented through embedding the QOX operator in BBO algorithm. Additionally, a modified migration equation is used to improve the population diversity. Several experiments are conducted on 23 benchmark functions. Experimental results show that the proposed algorithm is capable of locating the optimal or closed-to-optimal solution. Comparisons with other variants of BBO algorithms and state-of-the-art orthogonal-based evolutionary algorithms demonstrate that our proposed algorithm possesses faster global convergence rate, high-precision solution, and stronger robustness. Finally, the analysis result of the performance of QOX indicates that QOX plays a key role in the proposed algorithm.
Adaptive integrand decomposition in parallel and orthogonal space
International Nuclear Information System (INIS)
Mastrolia, Pierpaolo; Peraro, Tiziano; Primo, Amedeo
2016-01-01
We present the integrand decomposition of multiloop scattering amplitudes in parallel and orthogonal space-time dimensions, d=d ∥ +d ⊥ , being d ∥ the dimension of the parallel space spanned by the legs of the diagrams. When the number n of external legs is n≤4, the corresponding representation of multiloop integrals exposes a subset of integration variables which can be easily integrated away by means of Gegenbauer polynomials orthogonality condition. By decomposing the integration momenta along parallel and orthogonal directions, the polynomial division algorithm is drastically simplified. Moreover, the orthogonality conditions of Gegenbauer polynomials can be suitably applied to integrate the decomposed integrand, yielding the systematic annihilation of spurious terms. Consequently, multiloop amplitudes are expressed in terms of integrals corresponding to irreducible scalar products of loop momenta and external ones. We revisit the one-loop decomposition, which turns out to be controlled by the maximum-cut theorem in different dimensions, and we discuss the integrand reduction of two-loop planar and non-planar integrals up to n=8 legs, for arbitrary external and internal kinematics. The proposed algorithm extends to all orders in perturbation theory.
Adaptive integrand decomposition in parallel and orthogonal space
Energy Technology Data Exchange (ETDEWEB)
Mastrolia, Pierpaolo [Dipartimento di Fisica ed Astronomia, Università di Padova,Via Marzolo 8, 35131 Padova (Italy); INFN, Sezione di Padova,Via Marzolo 8, 35131 Padova (Italy); Peraro, Tiziano [Higgs Centre for Theoretical Physics, School of Physics and Astronomy,The University of Edinburgh,James Clerk Maxwell Building,Peter Guthrie Tait Road, Edinburgh EH9 3FD, Scotland (United Kingdom); Primo, Amedeo [Dipartimento di Fisica ed Astronomia, Università di Padova,Via Marzolo 8, 35131 Padova (Italy); INFN, Sezione di Padova,Via Marzolo 8, 35131 Padova (Italy)
2016-08-29
We present the integrand decomposition of multiloop scattering amplitudes in parallel and orthogonal space-time dimensions, d=d{sub ∥}+d{sub ⊥}, being d{sub ∥} the dimension of the parallel space spanned by the legs of the diagrams. When the number n of external legs is n≤4, the corresponding representation of multiloop integrals exposes a subset of integration variables which can be easily integrated away by means of Gegenbauer polynomials orthogonality condition. By decomposing the integration momenta along parallel and orthogonal directions, the polynomial division algorithm is drastically simplified. Moreover, the orthogonality conditions of Gegenbauer polynomials can be suitably applied to integrate the decomposed integrand, yielding the systematic annihilation of spurious terms. Consequently, multiloop amplitudes are expressed in terms of integrals corresponding to irreducible scalar products of loop momenta and external ones. We revisit the one-loop decomposition, which turns out to be controlled by the maximum-cut theorem in different dimensions, and we discuss the integrand reduction of two-loop planar and non-planar integrals up to n=8 legs, for arbitrary external and internal kinematics. The proposed algorithm extends to all orders in perturbation theory.
SFESA: a web server for pairwise alignment refinement by secondary structure shifts.
Tong, Jing; Pei, Jimin; Grishin, Nick V
2015-09-03
Protein sequence alignment is essential for a variety of tasks such as homology modeling and active site prediction. Alignment errors remain the main cause of low-quality structure models. A bioinformatics tool to refine alignments is needed to make protein alignments more accurate. We developed the SFESA web server to refine pairwise protein sequence alignments. Compared to the previous version of SFESA, which required a set of 3D coordinates for a protein, the new server will search a sequence database for the closest homolog with an available 3D structure to be used as a template. For each alignment block defined by secondary structure elements in the template, SFESA evaluates alignment variants generated by local shifts and selects the best-scoring alignment variant. A scoring function that combines the sequence score of profile-profile comparison and the structure score of template-derived contact energy is used for evaluation of alignments. PROMALS pairwise alignments refined by SFESA are more accurate than those produced by current advanced alignment methods such as HHpred and CNFpred. In addition, SFESA also improves alignments generated by other software. SFESA is a web-based tool for alignment refinement, designed for researchers to compute, refine, and evaluate pairwise alignments with a combined sequence and structure scoring of alignment blocks. To our knowledge, the SFESA web server is the only tool that refines alignments by evaluating local shifts of secondary structure elements. The SFESA web server is available at http://prodata.swmed.edu/sfesa.
Nikolakopoulou, Adriani; Mavridis, Dimitris; Furukawa, Toshi A; Cipriani, Andrea; Tricco, Andrea C; Straus, Sharon E; Siontis, George C M; Egger, Matthias
2018-01-01
Abstract Objective To examine whether the continuous updating of networks of prospectively planned randomised controlled trials (RCTs) (“living” network meta-analysis) provides strong evidence against the null hypothesis in comparative effectiveness of medical interventions earlier than the updating of conventional, pairwise meta-analysis. Design Empirical study of the accumulating evidence about the comparative effectiveness of clinical interventions. Data sources Database of network meta-analyses of RCTs identified through searches of Medline, Embase, and the Cochrane Database of Systematic Reviews until 14 April 2015. Eligibility criteria for study selection Network meta-analyses published after January 2012 that compared at least five treatments and included at least 20 RCTs. Clinical experts were asked to identify in each network the treatment comparison of greatest clinical interest. Comparisons were excluded for which direct and indirect evidence disagreed, based on side, or node, splitting test (Pmeta-analysis. The frequency and time to strong evidence was compared against the null hypothesis between pairwise and network meta-analyses. Results 49 comparisons of interest from 44 networks were included; most (n=39, 80%) were between active drugs, mainly from the specialties of cardiology, endocrinology, psychiatry, and rheumatology. 29 comparisons were informed by both direct and indirect evidence (59%), 13 by indirect evidence (27%), and 7 by direct evidence (14%). Both network and pairwise meta-analysis provided strong evidence against the null hypothesis for seven comparisons, but for an additional 10 comparisons only network meta-analysis provided strong evidence against the null hypothesis (P=0.002). The median time to strong evidence against the null hypothesis was 19 years with living network meta-analysis and 23 years with living pairwise meta-analysis (hazard ratio 2.78, 95% confidence interval 1.00 to 7.72, P=0.05). Studies directly comparing
Construction of MDS self-dual codes from orthogonal matrices
Shi, Minjia; Sok, Lin; Solé, Patrick
2016-01-01
In this paper, we give algorithms and methods of construction of self-dual codes over finite fields using orthogonal matrices. Randomization in the orthogonal group, and code extension are the main tools. Some optimal, almost MDS, and MDS self-dual codes over both small and large prime fields are constructed.
Intrinsic Regularization in a Lorentz invariant non-orthogonal Euclidean Space
Tornow, Carmen
2006-01-01
It is shown that the Lorentz transformations can be derived for a non-orthogonal Euclidean space. In this geometry one finds the same relations of special relativity as the ones known from the orthogonal Minkowski space. In order to illustrate the advantage of a non-orthogonal Euclidean metric the two-point Green’s function at x = 0 for a self-interacting scalar field is calculated. In contrast to the Minkowski space the one loop mass correction derived from this function gives a convergent r...
The Fractional Orthogonal Difference with Applications
Directory of Open Access Journals (Sweden)
Enno Diekema
2015-06-01
Full Text Available This paper is a follow-up of a previous paper of the author published in Mathematics journal in 2015, which treats the so-called continuous fractional orthogonal derivative. In this paper, we treat the discrete case using the fractional orthogonal difference. The theory is illustrated with an application of a fractional differentiating filter. In particular, graphs are presented of the absolutel value of the modulus of the frequency response. These make clear that for a good insight into the behavior of a fractional differentiating filter, one has to look for the modulus of its frequency response in a log-log plot, rather than for plots in the time domain.
Image ranking in video sequences using pairwise image comparisons and temporal smoothing
CSIR Research Space (South Africa)
Burke, Michael
2016-12-01
Full Text Available The ability to predict the importance of an image is highly desirable in computer vision. This work introduces an image ranking scheme suitable for use in video or image sequences. Pairwise image comparisons are used to determine image ‘interest...
Orthogonal polynomials derived from the tridiagonal representation approach
Alhaidari, A. D.
2018-01-01
The tridiagonal representation approach is an algebraic method for solving second order differential wave equations. Using this approach in the solution of quantum mechanical problems, we encounter two new classes of orthogonal polynomials whose properties give the structure and dynamics of the corresponding physical system. For a certain range of parameters, one of these polynomials has a mix of continuous and discrete spectra making it suitable for describing physical systems with both scattering and bound states. In this work, we define these polynomials by their recursion relations and highlight some of their properties using numerical means. Due to the prime significance of these polynomials in physics, we hope that our short expose will encourage experts in the field of orthogonal polynomials to study them and derive their properties (weight functions, generating functions, asymptotics, orthogonality relations, zeros, etc.) analytically.
Orthogonal optimization of a water hydraulic pilot-operated pressure-reducing valve
Mao, Xuyao; Wu, Chao; Li, Bin; Wu, Di
2017-12-01
In order to optimize the comprehensive characteristics of a water hydraulic pilot-operated pressure-reducing valve, numerical orthogonal experimental design was adopted. Six parameters of the valve, containing diameters of damping plugs, volume of spring chamber, half cone angle of main spool, half cone angle of pilot spool, mass of main spool and diameter of main spool, were selected as the orthogonal factors, and each factor has five different levels. An index of flowrate stability, pressure stability and pressure overstrike stability (iFPOS) was used to judge the merit of each orthogonal attempt. Embedded orthogonal process turned up and a final optimal combination of these parameters was obtained after totally 50 numerical orthogonal experiments. iFPOS could be low to a fairly low value which meant that the valve could have much better stabilities. During the optimization, it was also found the diameters of damping plugs and main spool played important roles in stability characteristics of the valve.
Orthogonal polynomials on the unit circle part 2 spectral theory
Simon, Barry
2013-01-01
This two-part book is a comprehensive overview of the theory of probability measures on the unit circle, viewed especially in terms of the orthogonal polynomials defined by those measures. A major theme involves the connections between the Verblunsky coefficients (the coefficients of the recurrence equation for the orthogonal polynomials) and the measures, an analog of the spectral theory of one-dimensional Schrödinger operators. Among the topics discussed along the way are the asymptotics of Toeplitz determinants (Szegő's theorems), limit theorems for the density of the zeros of orthogonal po
Orthogonal polynomials on the unit circle part 1 classical theory
2009-01-01
This two-part book is a comprehensive overview of the theory of probability measures on the unit circle, viewed especially in terms of the orthogonal polynomials defined by those measures. A major theme involves the connections between the Verblunsky coefficients (the coefficients of the recurrence equation for the orthogonal polynomials) and the measures, an analog of the spectral theory of one-dimensional Schrodinger operators. Among the topics discussed along the way are the asymptotics of Toeplitz determinants (SzegÅ‘'s theorems), limit theorems for the density of the zeros of orthogonal po
Orthogonal experimental study on high frequency cascade thermoacoustic engine
International Nuclear Information System (INIS)
Hu Zhongjun; Li Qing; Li Zhengyu; Li Qiang
2008-01-01
Orthogonal experiment design and variance analysis were adopted to investigate a miniature cascade thermoacoustic engine, which consisted of one standing wave stage and one traveling wave stage in series, operating at about 470 Hz, using helium as the working gas. Optimum matching of the heater powers between stages was very important for the performance of a cascade thermoacoustic engine, which was obtained from the orthogonal experiments. The orthogonal experiment design considered three experimental factors, i.e. the charging pressure and the heater powers in the two stages, which varied on five different levels, respectively. According to the range analysis and variance analysis from the orthogonal experiments, the charging pressure was the most sensitive factor influencing the dynamic pressure amplitude and onset temperature. The total efficiency and the dynamic pressure amplitude increased when the traveling wave stage heater power increased. The optimum ratio of the heater powers between the traveling wave stage and the standing wave stage was about 1.25, compromising the total efficiency with the dynamic pressure amplitude
Influence of mesh non-orthogonality on numerical simulation of buoyant jet flows
International Nuclear Information System (INIS)
Ishigaki, Masahiro; Abe, Satoshi; Sibamoto, Yasuteru; Yonomoto, Taisuke
2017-01-01
Highlights: • Influence of mesh non-orthogonality on numerical solution of buoyant jet flows. • Buoyant jet flows are simulated with hexahedral and prismatic meshes. • Jet instability with prismatic meshes may be overestimated compared to that with hexahedral meshes. • Modified solvers that can reduce the influence of mesh non-orthogonality and reduce computation time are proposed. - Abstract: In the present research, we discuss the influence of mesh non-orthogonality on numerical solution of a type of buoyant flow. Buoyant jet flows are simulated numerically with hexahedral and prismatic mesh elements in an open source Computational Fluid Dynamics (CFD) code called “OpenFOAM”. Buoyant jet instability obtained with the prismatic meshes may be overestimated compared to that obtained with the hexahedral meshes when non-orthogonal correction is not applied in the code. Although the non-orthogonal correction method can improve the instability generated by mesh non-orthogonality, it may increase computation time required to reach a convergent solution. Thus, we propose modified solvers that can reduce the influence of mesh non-orthogonality and reduce the computation time compared to the existing solvers in OpenFOAM. It is demonstrated that calculations for a buoyant jet with a large temperature difference are performed faster by the modified solver.
Influence of mesh non-orthogonality on numerical simulation of buoyant jet flows
Energy Technology Data Exchange (ETDEWEB)
Ishigaki, Masahiro, E-mail: ishigaki.masahiro@jaea.go.jp; Abe, Satoshi; Sibamoto, Yasuteru; Yonomoto, Taisuke
2017-04-01
Highlights: • Influence of mesh non-orthogonality on numerical solution of buoyant jet flows. • Buoyant jet flows are simulated with hexahedral and prismatic meshes. • Jet instability with prismatic meshes may be overestimated compared to that with hexahedral meshes. • Modified solvers that can reduce the influence of mesh non-orthogonality and reduce computation time are proposed. - Abstract: In the present research, we discuss the influence of mesh non-orthogonality on numerical solution of a type of buoyant flow. Buoyant jet flows are simulated numerically with hexahedral and prismatic mesh elements in an open source Computational Fluid Dynamics (CFD) code called “OpenFOAM”. Buoyant jet instability obtained with the prismatic meshes may be overestimated compared to that obtained with the hexahedral meshes when non-orthogonal correction is not applied in the code. Although the non-orthogonal correction method can improve the instability generated by mesh non-orthogonality, it may increase computation time required to reach a convergent solution. Thus, we propose modified solvers that can reduce the influence of mesh non-orthogonality and reduce the computation time compared to the existing solvers in OpenFOAM. It is demonstrated that calculations for a buoyant jet with a large temperature difference are performed faster by the modified solver.
Dynamics of pairwise entanglement between two Tavis-Cummings atoms
International Nuclear Information System (INIS)
Guo Jinliang; Song Heshan
2008-01-01
We investigate the time evolution of pairwise entanglement between two Tavis-Cummings atoms for various entangled initial states, including pure and mixed states. We find that the phenomenon of entanglement sudden death behaviors is distinct in the evolution of entanglement for different initial states. What deserves mentioning here is that the initial portion of the excited state in the initial state is responsible for the sudden death of entanglement, and the degree of this effect also depends on the initial states
Velocity field calculation for non-orthogonal numerical grids
Energy Technology Data Exchange (ETDEWEB)
Flach, G. P. [Savannah River Site (SRS), Aiken, SC (United States). Savannah River National Lab. (SRNL)
2015-03-01
Computational grids containing cell faces that do not align with an orthogonal (e.g. Cartesian, cylindrical) coordinate system are routinely encountered in porous-medium numerical simulations. Such grids are referred to in this study as non-orthogonal grids because some cell faces are not orthogonal to a coordinate system plane (e.g. xy, yz or xz plane in Cartesian coordinates). Non-orthogonal grids are routinely encountered at the Savannah River Site in porous-medium flow simulations for Performance Assessments and groundwater flow modeling. Examples include grid lines that conform to the sloping roof of a waste tank or disposal unit in a 2D Performance Assessment simulation, and grid surfaces that conform to undulating stratigraphic surfaces in a 3D groundwater flow model. Particle tracking is routinely performed after a porous-medium numerical flow simulation to better understand the dynamics of the flow field and/or as an approximate indication of the trajectory and timing of advective solute transport. Particle tracks are computed by integrating the velocity field from cell to cell starting from designated seed (starting) positions. An accurate velocity field is required to attain accurate particle tracks. However, many numerical simulation codes report only the volumetric flowrate (e.g. PORFLOW) and/or flux (flowrate divided by area) crossing cell faces. For an orthogonal grid, the normal flux at a cell face is a component of the Darcy velocity vector in the coordinate system, and the pore velocity for particle tracking is attained by dividing by water content. For a non-orthogonal grid, the flux normal to a cell face that lies outside a coordinate plane is not a true component of velocity with respect to the coordinate system. Nonetheless, normal fluxes are often taken as Darcy velocity components, either naively or with accepted approximation. To enable accurate particle tracking or otherwise present an accurate depiction of the velocity field for a non-orthogonal
Directory of Open Access Journals (Sweden)
Zhixin Yang
2013-01-01
Full Text Available A reliable fault diagnostic system for gas turbine generator system (GTGS, which is complicated and inherent with many types of component faults, is essential to avoid the interruption of electricity supply. However, the GTGS diagnosis faces challenges in terms of the existence of simultaneous-fault diagnosis and high cost in acquiring the exponentially increased simultaneous-fault vibration signals for constructing the diagnostic system. This research proposes a new diagnostic framework combining feature extraction, pairwise-coupled probabilistic classifier, and decision threshold optimization. The feature extraction module adopts wavelet packet transform and time-domain statistical features to extract vibration signal features. Kernel principal component analysis is then applied to further reduce the redundant features. The features of single faults in a simultaneous-fault pattern are extracted and then detected using a probabilistic classifier, namely, pairwise-coupled relevance vector machine, which is trained with single-fault patterns only. Therefore, the training dataset of simultaneous-fault patterns is unnecessary. To optimize the decision threshold, this research proposes to use grid search method which can ensure a global solution as compared with traditional computational intelligence techniques. Experimental results show that the proposed framework performs well for both single-fault and simultaneous-fault diagnosis and is superior to the frameworks without feature extraction and pairwise coupling.
Direct image reconstruction with limited angle projection data for computerized tomography
International Nuclear Information System (INIS)
Inouye, T.
1980-01-01
Discussions are made on the minimum angle range for projection data necessary to reconstruct the complete CT image. As is easily shown from the image reconstruction theorem, the lack of projection angle provides no data for the Fourier transformed function of the object on the corresponding angular directions, where the projections are missing. In a normal situation, the Fourier transformed function of an object image holds an analytic characteristic with respect to two-dimensional orthogonal parameters. This characteristic enables uniquely prolonging the function outside the obtained region employing a sort of analytic continuation with respect to both parameters. In the method reported here, an object pattern, which is confined within a finite range, is shifted to a specified region to have complete orthogonal function expansions without changing the projection angle directions. These orthogonal functions are analytically extended to the missing projection angle range and the whole function is determined. This method does not include any estimation process, whose effectiveness is often seriously jeopardized by the presence of a slight fluctuation component. Computer simulations were carried out to demonstrate the effectiveness of the method
Characterization of orthogonal transfer array CCDs for the WIYN one degree imager
Lesser, Michael; Ouellette, David; Boroson, Todd; Harbeck, Daniel; Martin, Pierre; Jacoby, George; Cavin, John; Sawyer, David; Boggs, Kasey; Bredthauer, Richard
2012-03-01
The WIYN One Degree Imager (ODI) will provide a one degree field of view for the WIYN 3.5 m telescope located on Kitt Peak near Tucson, Arizona. Its focal plane consists of an 8x8 grid of Orthogonal Transfer Array (OTA) CCD detectors. These detectors are the STA2200 OTA CCDs designed and fabricated by Semiconductor Technology Associates, Inc. and backside processed at the University of Arizona Imaging Technology Laboratory. Several lot runs of the STA2200 detectors have been fabricated. We have backside processed devices from these different lots and provide detector performance characterization, including noise, CTE, cosmetics, quantum efficiency, and some orthogonal transfer characteristics. We discuss the performance differences for the devices with different silicon thickness and resistivity. A fully buttable custom detector package has been developed for this project which allows hybridization of the silicon detectors directly onto an aluminum nitride substrate with an embedded pin grid array. This package is mounted on a silicon-aluminum alloy which provides a flat imaging surface of less than 20 microns peakvalley at the -100 C operating temperature. Characterization of the package performance, including low temperature profilometry, is described in this paper.
Consequences of wave function orthogonality for medium energy nuclear reactions
International Nuclear Information System (INIS)
Noble, J.V.
1978-01-01
In the usual models of high-energy bound-state to continuum transitions no account is taken of the orthogonality of the bound and continuum wave functions. This orthogonality induces considerable cancellations in the overlap integrals expressing the transition amplitudes for reactions such as (e,e'p), (γ,p), and (π,N), which are simply not included in the distorted-wave Born-approximation calculations which to date remain the only computationally feasible heirarchy of approximations. The object of this paper is to present a new formulation of the bound-state to continuum transition problem, based upon flux conservation, in which the orthogonality of wave functions is taken into account ab initio. The new formulation, while exact if exact wave functions are used, offers the possibility of using approximate wave functions for the continuum states without doing violence to the cancellations induced by orthogonality. The method is applied to single-particle states obeying the Schroedinger and Dirac equations, as well as to a coupled-channel model in which absorptive processes can be described in a fully consistent manner. Several types of absorption vertex are considered, and in the (π,N) case the equivalence of pseudoscalar and pseudovector πNN coupling is seen to follow directly from wave function orthogonality
GapMis: a tool for pairwise sequence alignment with a single gap.
Flouri, Tomás; Frousios, Kimon; Iliopoulos, Costas S; Park, Kunsoo; Pissis, Solon P; Tischler, German
2013-08-01
Pairwise sequence alignment has received a new motivation due to the advent of recent patents in next-generation sequencing technologies, particularly so for the application of re-sequencing---the assembly of a genome directed by a reference sequence. After the fast alignment between a factor of the reference sequence and a high-quality fragment of a short read by a short-read alignment programme, an important problem is to find the alignment between a relatively short succeeding factor of the reference sequence and the remaining low-quality part of the read allowing a number of mismatches and the insertion of a single gap in the alignment. We present GapMis, a tool for pairwise sequence alignment with a single gap. It is based on a simple algorithm, which computes a different version of the traditional dynamic programming matrix. The presented experimental results demonstrate that GapMis is more suitable and efficient than most popular tools for this task.
Locating one pairwise interaction: Three recursive constructions
Directory of Open Access Journals (Sweden)
Charles J. Colbourn
2016-09-01
Full Text Available In a complex component-based system, choices (levels for components (factors may interact tocause faults in the system behaviour. When faults may be caused by interactions among few factorsat specific levels, covering arrays provide a combinatorial test suite for discovering the presence offaults. While well studied, covering arrays do not enable one to determine the specific levels of factorscausing the faults; locating arrays ensure that the results from test suite execution suffice to determinethe precise levels and factors causing faults, when the number of such causes is small. Constructionsfor locating arrays are at present limited to heuristic computational methods and quite specific directconstructions. In this paper three recursive constructions are developed for locating arrays to locateone pairwise interaction causing a fault.
International Nuclear Information System (INIS)
Daoud, M.; Ahl Laamara, R.
2012-01-01
We give the explicit expressions of the pairwise quantum correlations present in superpositions of multipartite coherent states. A special attention is devoted to the evaluation of the geometric quantum discord. The dynamics of quantum correlations under a dephasing channel is analyzed. A comparison of geometric measure of quantum discord with that of concurrence shows that quantum discord in multipartite coherent states is more resilient to dissipative environments than is quantum entanglement. To illustrate our results, we consider some special superpositions of Weyl–Heisenberg, SU(2) and SU(1,1) coherent states which interpolate between Werner and Greenberger–Horne–Zeilinger states. -- Highlights: ► Pairwise quantum correlations multipartite coherent states. ► Explicit expression of geometric quantum discord. ► Entanglement sudden death and quantum discord robustness. ► Generalized coherent states interpolating between Werner and Greenberger–Horne–Zeilinger states
Energy Technology Data Exchange (ETDEWEB)
Daoud, M., E-mail: m_daoud@hotmail.com [Department of Physics, Faculty of Sciences, University Ibnou Zohr, Agadir (Morocco); Ahl Laamara, R., E-mail: ahllaamara@gmail.com [LPHE-Modeling and Simulation, Faculty of Sciences, University Mohammed V, Rabat (Morocco); Centre of Physics and Mathematics, CPM, CNESTEN, Rabat (Morocco)
2012-07-16
We give the explicit expressions of the pairwise quantum correlations present in superpositions of multipartite coherent states. A special attention is devoted to the evaluation of the geometric quantum discord. The dynamics of quantum correlations under a dephasing channel is analyzed. A comparison of geometric measure of quantum discord with that of concurrence shows that quantum discord in multipartite coherent states is more resilient to dissipative environments than is quantum entanglement. To illustrate our results, we consider some special superpositions of Weyl–Heisenberg, SU(2) and SU(1,1) coherent states which interpolate between Werner and Greenberger–Horne–Zeilinger states. -- Highlights: ► Pairwise quantum correlations multipartite coherent states. ► Explicit expression of geometric quantum discord. ► Entanglement sudden death and quantum discord robustness. ► Generalized coherent states interpolating between Werner and Greenberger–Horne–Zeilinger states.
On the non-orthogonal sampling scheme for Gabor's signal expansion
Bastiaans, M.J.; Leest, van A.J.; Veen, J.P.
2000-01-01
Gabor's signal expansion and the Gabor transform are formulated on a non-orthogonal time-frequency lattice instead of on the traditional rectangular lattice [1,2]. The reason for doing so is that a non-orthogonal sampling geometry might be better adapted to the form of the window functions (in the
DIALIGN P: Fast pair-wise and multiple sequence alignment using parallel processors
Directory of Open Access Journals (Sweden)
Kaufmann Michael
2004-09-01
Full Text Available Abstract Background Parallel computing is frequently used to speed up computationally expensive tasks in Bioinformatics. Results Herein, a parallel version of the multi-alignment program DIALIGN is introduced. We propose two ways of dividing the program into independent sub-routines that can be run on different processors: (a pair-wise sequence alignments that are used as a first step to multiple alignment account for most of the CPU time in DIALIGN. Since alignments of different sequence pairs are completely independent of each other, they can be distributed to multiple processors without any effect on the resulting output alignments. (b For alignments of large genomic sequences, we use a heuristics by splitting up sequences into sub-sequences based on a previously introduced anchored alignment procedure. For our test sequences, this combined approach reduces the program running time of DIALIGN by up to 97%. Conclusions By distributing sub-routines to multiple processors, the running time of DIALIGN can be crucially improved. With these improvements, it is possible to apply the program in large-scale genomics and proteomics projects that were previously beyond its scope.
A note on the zeros of Freud-Sobolev orthogonal polynomials
Moreno-Balcazar, Juan J.
2007-10-01
We prove that the zeros of a certain family of Sobolev orthogonal polynomials involving the Freud weight function e-x4 on are real, simple, and interlace with the zeros of the Freud polynomials, i.e., those polynomials orthogonal with respect to the weight function e-x4. Some numerical examples are shown.
On the calculation of x-ray scattering signals from pairwise radial distribution functions
DEFF Research Database (Denmark)
Dohn, Asmus Ougaard; Biasin, Elisa; Haldrup, Kristoffer
2015-01-01
We derive a formulation for evaluating (time-resolved) x-ray scattering signals of solvated chemical systems, based on pairwise radial distribution functions, with the aim of this formulation to accompany molecular dynamics simulations. The derivation is described in detail to eliminate any possi...
Solution of the ratchet-shakedown Bree problem with an extra orthogonal primary load
International Nuclear Information System (INIS)
Bradford, R.A.W.
2015-01-01
The complete shakedown and ratcheting solution is derived analytically for a flat plate subject to unequal biaxial primary membrane stresses and a cyclic secondary bending stress in one in-plane direction (x). The Tresca yield condition and elastic-perfectly plastic behaviour are assumed. It is shown that the results can be expressed in the form of a “universal” ratchet diagram applicable for all magnitudes of orthogonal load. For sufficiently large cyclic bending stresses, tensile ratcheting can occur in the x direction if the x direction primary membrane stress exceeds half that in the orthogonal direction. Conversely, for sufficiently large cyclic bending stresses ratcheting in the x direction will be compressive if the x direction primary membrane stress is less than half that in the orthogonal direction. When the x direction primary membrane stress is exactly half that in the orthogonal direction ratcheting cannot occur however large the cyclic secondary bending stress. - Highlights: • A complete shakedown and ratcheting solution is derived analytically. • The problem is Bree-like but with an extra orthogonal primary load. • The ratchet diagram can be expressed in a form applicable to any orthogonal load. • Tensile ratcheting can occur if the primary load exceeds half the orthogonal load. • Compressive ratcheting can occur for smaller primary loads
Quantitative Boltzmann-Gibbs Principles via Orthogonal Polynomial Duality
Ayala, Mario; Carinci, Gioia; Redig, Frank
2018-06-01
We study fluctuation fields of orthogonal polynomials in the context of particle systems with duality. We thereby obtain a systematic orthogonal decomposition of the fluctuation fields of local functions, where the order of every term can be quantified. This implies a quantitative generalization of the Boltzmann-Gibbs principle. In the context of independent random walkers, we complete this program, including also fluctuation fields in non-stationary context (local equilibrium). For other interacting particle systems with duality such as the symmetric exclusion process, similar results can be obtained, under precise conditions on the n particle dynamics.
Directory of Open Access Journals (Sweden)
Moret Nicola
2010-01-01
Full Text Available Abstract We address the efficient realization of a filtered multitone (FMT modulation system and its orthogonal design. FMT modulation can be viewed as a Discrete Fourier Transform (DFT modulated filter bank (FB. It generalizes the popular orthogonal frequency division multiplexing (OFDM scheme by deploying frequency confined subchannel pulses. We compare three realizations that have been described by Cvetković and Vetterli (1998, and Weiss and Stewart (2000, and Tonello (2006. A detailed derivation of them is performed in the time-domain via the exploitation of different FB polyphase decompositions. We then consider the design of an orthogonal FMT system and we exploit the third realization which allows simplifying the orthogonal FB design and obtaining a block diagonal system matrix with independent subblocks. A numerical method is then presented to obtain an orthogonal FB with well frequency confined subchannel pulses for arbitrarily large number of subchannels. Several examples of pulses with minimal length are reported and their performance is evaluated in typical multipath fading channels. Finally, we compare the orthogonal FMT system with a cyclically prefixed OFDM system in the IEEE 802.11 wireless LAN channel. In this scenario, FMT with minimal length pulses and single tap subchannel equalization outperforms the OFDM system in achievable rate.
Directory of Open Access Journals (Sweden)
Andrea M. Tonello
2010-01-01
Full Text Available We address the efficient realization of a filtered multitone (FMT modulation system and its orthogonal design. FMT modulation can be viewed as a Discrete Fourier Transform (DFT modulated filter bank (FB. It generalizes the popular orthogonal frequency division multiplexing (OFDM scheme by deploying frequency confined subchannel pulses. We compare three realizations that have been described by Cvetković and Vetterli (1998, and Weiss and Stewart (2000, and Tonello (2006. A detailed derivation of them is performed in the time-domain via the exploitation of different FB polyphase decompositions. We then consider the design of an orthogonal FMT system and we exploit the third realization which allows simplifying the orthogonal FB design and obtaining a block diagonal system matrix with independent subblocks. A numerical method is then presented to obtain an orthogonal FB with well frequency confined subchannel pulses for arbitrarily large number of subchannels. Several examples of pulses with minimal length are reported and their performance is evaluated in typical multipath fading channels. Finally, we compare the orthogonal FMT system with a cyclically prefixed OFDM system in the IEEE 802.11 wireless LAN channel. In this scenario, FMT with minimal length pulses and single tap subchannel equalization outperforms the OFDM system in achievable rate.
Moret, Nicola; Tonello, Andrea M.
2010-12-01
We address the efficient realization of a filtered multitone (FMT) modulation system and its orthogonal design. FMT modulation can be viewed as a Discrete Fourier Transform (DFT) modulated filter bank (FB). It generalizes the popular orthogonal frequency division multiplexing (OFDM) scheme by deploying frequency confined subchannel pulses. We compare three realizations that have been described by Cvetković and Vetterli (1998), and Weiss and Stewart (2000), and Tonello (2006). A detailed derivation of them is performed in the time-domain via the exploitation of different FB polyphase decompositions. We then consider the design of an orthogonal FMT system and we exploit the third realization which allows simplifying the orthogonal FB design and obtaining a block diagonal system matrix with independent subblocks. A numerical method is then presented to obtain an orthogonal FB with well frequency confined subchannel pulses for arbitrarily large number of subchannels. Several examples of pulses with minimal length are reported and their performance is evaluated in typical multipath fading channels. Finally, we compare the orthogonal FMT system with a cyclically prefixed OFDM system in the IEEE 802.11 wireless LAN channel. In this scenario, FMT with minimal length pulses and single tap subchannel equalization outperforms the OFDM system in achievable rate.
A pragmatic pairwise group-decision method for selection of sites for nuclear power plants
International Nuclear Information System (INIS)
Kutbi, I.I.
1987-01-01
A pragmatic pairwise group-decision approach is applied to compare two regions in order to select the more suitable one for construction of nulcear power plants in the Kingdom of Saudi Arabia. The selection methodology is based on pairwise comparison by forced choice. The method facilitates rating of the regions or sites using simple calculations. Two regions, one close to Dhahran on the Arabian Gulf and another close to Jeddah on the Red Sea, are evaluated. No specific site in either region is considered at this stage. The comparison is based on a set of selection criteria which include (i) topography, (ii) geology, (iii) seismology, (iv) meteorology, (v) oceanography, (vi) hydrology and (vii) proximetry to oil and gas fields. The comparison shows that the Jeddah region is more suitable than the Dhahran region. (orig.)
A high-order q-difference equation for q-Hahn multiple orthogonal polynomials
DEFF Research Database (Denmark)
Arvesú, J.; Esposito, Chiara
2012-01-01
A high-order linear q-difference equation with polynomial coefficients having q-Hahn multiple orthogonal polynomials as eigenfunctions is given. The order of the equation coincides with the number of orthogonality conditions that these polynomials satisfy. Some limiting situations when are studie....... Indeed, the difference equation for Hahn multiple orthogonal polynomials given in Lee [J. Approx. Theory (2007), ), doi: 10.1016/j.jat.2007.06.002] is obtained as a limiting case....
Bounds and asymptotics for orthogonal polynomials for varying weights
Levin, Eli
2018-01-01
This book establishes bounds and asymptotics under almost minimal conditions on the varying weights, and applies them to universality limits and entropy integrals. Orthogonal polynomials associated with varying weights play a key role in analyzing random matrices and other topics. This book will be of use to a wide community of mathematicians, physicists, and statisticians dealing with techniques of potential theory, orthogonal polynomials, approximation theory, as well as random matrices. .
Document Level Assessment of Document Retrieval Systems in a Pairwise System Evaluation
Rajagopal, Prabha; Ravana, Sri Devi
2017-01-01
Introduction: The use of averaged topic-level scores can result in the loss of valuable data and can cause misinterpretation of the effectiveness of system performance. This study aims to use the scores of each document to evaluate document retrieval systems in a pairwise system evaluation. Method: The chosen evaluation metrics are document-level…
Parallel and orthogonal stimulus in ultradiluted neural networks
International Nuclear Information System (INIS)
Sobral, G. A. Jr.; Vieira, V. M.; Lyra, M. L.; Silva, C. R. da
2006-01-01
Extending a model due to Derrida, Gardner, and Zippelius, we have studied the recognition ability of an extreme and asymmetrically diluted version of the Hopfield model for associative memory by including the effect of a stimulus in the dynamics of the system. We obtain exact results for the dynamic evolution of the average network superposition. The stimulus field was considered as proportional to the overlapping of the state of the system with a particular stimulated pattern. Two situations were analyzed, namely, the external stimulus acting on the initialization pattern (parallel stimulus) and the external stimulus acting on a pattern orthogonal to the initialization one (orthogonal stimulus). In both cases, we obtained the complete phase diagram in the parameter space composed of the stimulus field, thermal noise, and network capacity. Our results show that the system improves its recognition ability for parallel stimulus. For orthogonal stimulus two recognition phases emerge with the system locking at the initialization or stimulated pattern. We confront our analytical results with numerical simulations for the noiseless case T=0
Image compression based on orthogonal balanced multiwavelets with symmetry/antisymmetry
Zhang, Liping; Zhao, Yi
2018-03-01
Multiwavelets have orthogonality, compacted support and symmetry simultaneously, these properties are very important for signal processing. However, most of Multiwavelets require related prefilters. An approach to construction of symmetry/antisymmetry orthogonal filter is proposed and its corresponding balanced filter is constructed, no any prefilter is necessary. Experimental results prove its performance is superior to DGHM and CL multiwavelets, higher than Bi9/7.
Problems of the orthogonalized plane wave method. 1
International Nuclear Information System (INIS)
Farberovich, O.V.; Kurganskii, S.I.; Domashevskaya, E.P.
1979-01-01
The main problems of the orthogonalized plane wave method are discussed including (a) consideration of core states; (b) effect of overlap of wave functions of external core states upon the band structure; (c) calculation of d-type states. The modified orthogonal plane wave method (MOPW method) of Deegan and Twose is applied in a general form to solve the problems of the usual OPW method. For the first time the influence on the spectrum of the main parameters of the MOPW method is studied systematically by calculating the electronic energy spectrum in the transition metals Nb and V. (author)
Definite Integrals using Orthogonality and Integral Transforms
Directory of Open Access Journals (Sweden)
Howard S. Cohl
2012-10-01
Full Text Available We obtain definite integrals for products of associated Legendre functions with Bessel functions, associated Legendre functions, and Chebyshev polynomials of the first kind using orthogonality and integral transforms.
Nonclassical Orthogonal Polynomials and Corresponding Quadratures
Fukuda, H; Alt, E O; Matveenko, A V
2004-01-01
We construct nonclassical orthogonal polynomials and calculate abscissas and weights of Gaussian quadrature for arbitrary weight and interval. The program is written by Mathematica and it works if moment integrals are given analytically. The result is a FORTRAN subroutine ready to utilize the quadrature.
Pairwise contact energy statistical potentials can help to find probability of point mutations.
Saravanan, K M; Suvaithenamudhan, S; Parthasarathy, S; Selvaraj, S
2017-01-01
To adopt a particular fold, a protein requires several interactions between its amino acid residues. The energetic contribution of these residue-residue interactions can be approximated by extracting statistical potentials from known high resolution structures. Several methods based on statistical potentials extracted from unrelated proteins are found to make a better prediction of probability of point mutations. We postulate that the statistical potentials extracted from known structures of similar folds with varying sequence identity can be a powerful tool to examine probability of point mutation. By keeping this in mind, we have derived pairwise residue and atomic contact energy potentials for the different functional families that adopt the (α/β) 8 TIM-Barrel fold. We carried out computational point mutations at various conserved residue positions in yeast Triose phosphate isomerase enzyme for which experimental results are already reported. We have also performed molecular dynamics simulations on a subset of point mutants to make a comparative study. The difference in pairwise residue and atomic contact energy of wildtype and various point mutations reveals probability of mutations at a particular position. Interestingly, we found that our computational prediction agrees with the experimental studies of Silverman et al. (Proc Natl Acad Sci 2001;98:3092-3097) and perform better prediction than i Mutant and Cologne University Protein Stability Analysis Tool. The present work thus suggests deriving pairwise contact energy potentials and molecular dynamics simulations of functionally important folds could help us to predict probability of point mutations which may ultimately reduce the time and cost of mutation experiments. Proteins 2016; 85:54-64. © 2016 Wiley Periodicals, Inc. © 2016 Wiley Periodicals, Inc.
Structural profiles of human miRNA families from pairwise clustering
DEFF Research Database (Denmark)
Kaczkowski, Bogumil; Þórarinsson, Elfar; Reiche, Kristin
2009-01-01
secondary structure already predicted, little is known about the patterns of structural conservation among pre-miRNAs. We address this issue by clustering the human pre-miRNA sequences based on pairwise, sequence and secondary structure alignment using FOLDALIGN, followed by global multiple alignment...... of obtained clusters by WAR. As a result, the common secondary structure was successfully determined for four FOLDALIGN clusters: the RF00027 structural family of the Rfam database and three clusters with previously undescribed consensus structures. Availability: http://genome.ku.dk/resources/mirclust...
Analysis of Geographic and Pairwise Distances among Chinese Cashmere Goat Populations
Liu, Jian-Bin; Wang, Fan; Lang, Xia; Zha, Xi; Sun, Xiao-Ping; Yue, Yao-Jing; Feng, Rui-Lin; Yang, Bo-Hui; Guo, Jian
2013-01-01
This study investigated the geographic and pairwise distances of nine Chinese local Cashmere goat populations through the analysis of 20 microsatellite DNA markers. Fluorescence PCR was used to identify the markers, which were selected based on their significance as identified by the Food and Agriculture Organization of the United Nations (FAO) and the International Society for Animal Genetics (ISAG). In total, 206 alleles were detected; the average allele number was 10.30; the polymorphism i...
A new description of orthogonal bases
Coecke, Bob; Pavlovic, Dusko; Vicary, Jamie
2012-01-01
We show that an orthogonal basis for a finite-dimensional Hilbert space can be equivalently characterised as a commutative †-Frobenius monoid in the category FdHilb, which has finite-dimensional Hilbert spaces as objects and continuous linear maps as morphisms, and tensor product for the monoidal
ProteinWorldDB: querying radical pairwise alignments among protein sets from complete genomes.
Otto, Thomas Dan; Catanho, Marcos; Tristão, Cristian; Bezerra, Márcia; Fernandes, Renan Mathias; Elias, Guilherme Steinberger; Scaglia, Alexandre Capeletto; Bovermann, Bill; Berstis, Viktors; Lifschitz, Sergio; de Miranda, Antonio Basílio; Degrave, Wim
2010-03-01
Many analyses in modern biological research are based on comparisons between biological sequences, resulting in functional, evolutionary and structural inferences. When large numbers of sequences are compared, heuristics are often used resulting in a certain lack of accuracy. In order to improve and validate results of such comparisons, we have performed radical all-against-all comparisons of 4 million protein sequences belonging to the RefSeq database, using an implementation of the Smith-Waterman algorithm. This extremely intensive computational approach was made possible with the help of World Community Grid, through the Genome Comparison Project. The resulting database, ProteinWorldDB, which contains coordinates of pairwise protein alignments and their respective scores, is now made available. Users can download, compare and analyze the results, filtered by genomes, protein functions or clusters. ProteinWorldDB is integrated with annotations derived from Swiss-Prot, Pfam, KEGG, NCBI Taxonomy database and gene ontology. The database is a unique and valuable asset, representing a major effort to create a reliable and consistent dataset of cross-comparisons of the whole protein content encoded in hundreds of completely sequenced genomes using a rigorous dynamic programming approach. The database can be accessed through http://proteinworlddb.org
HOLA: Human-like Orthogonal Network Layout.
Kieffer, Steve; Dwyer, Tim; Marriott, Kim; Wybrow, Michael
2016-01-01
Over the last 50 years a wide variety of automatic network layout algorithms have been developed. Some are fast heuristic techniques suitable for networks with hundreds of thousands of nodes while others are multi-stage frameworks for higher-quality layout of smaller networks. However, despite decades of research currently no algorithm produces layout of comparable quality to that of a human. We give a new "human-centred" methodology for automatic network layout algorithm design that is intended to overcome this deficiency. User studies are first used to identify the aesthetic criteria algorithms should encode, then an algorithm is developed that is informed by these criteria and finally, a follow-up study evaluates the algorithm output. We have used this new methodology to develop an automatic orthogonal network layout method, HOLA, that achieves measurably better (by user study) layout than the best available orthogonal layout algorithm and which produces layouts of comparable quality to those produced by hand.
Shima, Tomoyuki; Tomeba, Hiromichi; Adachi, Fumiyuki
Orthogonal multi-carrier direct sequence code division multiple access (orthogonal MC DS-CDMA) is a combination of time-domain spreading and orthogonal frequency division multiplexing (OFDM). In orthogonal MC DS-CDMA, the frequency diversity gain can be obtained by applying frequency-domain equalization (FDE) based on minimum mean square error (MMSE) criterion to a block of OFDM symbols and can improve the bit error rate (BER) performance in a severe frequency-selective fading channel. FDE requires an accurate estimate of the channel gain. The channel gain can be estimated by removing the pilot modulation in the frequency domain. In this paper, we propose a pilot-assisted channel estimation suitable for orthogonal MC DS-CDMA with FDE and evaluate, by computer simulation, the BER performance in a frequency-selective Rayleigh fading channel.
Orthogonal views improves localisation in bone scans of wrist
International Nuclear Information System (INIS)
Roth, A.L.
1997-01-01
Full text: Of all nuclear medicine studies, bone scans are the most fundamental. However, straightforward these may seem, there are always mechanisms that can be implemented which assist in a more precise diagnosis, particularly in areas with an intricate bone structure. An 18-year-old right-handed student presented to her doctor with a one month history of pain over the right distal radio-ulna joint area. Clinically, she had prominence of the right ulna, which suggested that there may have been a previous injury to the wrist. Also, pronation/supination were painful where there was swelling of the extensor carpi ulnaris tendon, as well as some discomfort with clicking in ulna deviation/rotation. The X-rays demonstrated some premature radial epiphysial closure. A bone scan was requested to attempt to localise the main inflammatory focus. The dynamic study was performed in the planar projection with an immediate blood pool for 300k being taken. These demonstrated a vascular blush medially. A medial blood pool image was acquired and it localised the abnormal vascularity as being dorsal. A separate focal area of less intense blood pooling was also noted in the line of the distal ulna. Delayed images showed increased uptake localised to the ulna styloid. Anatomically, the superficial vascular blush correlated with tenosynovitis. Hence, the orthogonal initial and delayed images were definitive in the diagnoses of tenosynovitis of the extensor carpi ulnaris tendon. This clearly complements the information provided by the palmar view. However, it is important to remember that an increased radiation dose to the technologist is incurred as a result of the extra orthogonal view, hence attention to technique is imperative
Orthogonal views improves localisation in bone scans of wrist
Energy Technology Data Exchange (ETDEWEB)
Roth, A.L.
1997-09-01
Full text: Of all nuclear medicine studies, bone scans are the most fundamental. However, straightforward these may seem, there are always mechanisms that can be implemented which assist in a more precise diagnosis, particularly in areas with an intricate bone structure. An 18-year-old right-handed student presented to her doctor with a one month history of pain over the right distal radio-ulna joint area. Clinically, she had prominence of the right ulna, which suggested that there may have been a previous injury to the wrist. Also, pronation/supination were painful where there was swelling of the extensor carpi ulnaris tendon, as well as some discomfort with clicking in ulna deviation/rotation. The X-rays demonstrated some premature radial epiphysial closure. A bone scan was requested to attempt to localise the main inflammatory focus. The dynamic study was performed in the planar projection with an immediate blood pool for 300k being taken. These demonstrated a vascular blush medially. A medial blood pool image was acquired and it localised the abnormal vascularity as being dorsal. A separate focal area of less intense blood pooling was also noted in the line of the distal ulna. Delayed images showed increased uptake localised to the ulna styloid. Anatomically, the superficial vascular blush correlated with tenosynovitis. Hence, the orthogonal initial and delayed images were definitive in the diagnoses of tenosynovitis of the extensor carpi ulnaris tendon. This clearly complements the information provided by the palmar view. However, it is important to remember that an increased radiation dose to the technologist is incurred as a result of the extra orthogonal view, hence attention to technique is imperative.
A water market simulator considering pair-wise trades between agents
Huskova, I.; Erfani, T.; Harou, J. J.
2012-04-01
In many basins in England no further water abstraction licences are available. Trading water between water rights holders has been recognized as a potentially effective and economically efficient strategy to mitigate increasing scarcity. A screening tool that could assess the potential for trade through realistic simulation of individual water rights holders would help assess the solution's potential contribution to local water management. We propose an optimisation-driven water market simulator that predicts pair-wise trade in a catchment and represents its interaction with natural hydrology and engineered infrastructure. A model is used to emulate licence-holders' willingness to engage in short-term trade transactions. In their simplest form agents are represented using an economic benefit function. The working hypothesis is that trading behaviour can be partially predicted based on differences in marginal values of water over space and time and estimates of transaction costs on pair-wise trades. We discuss the further possibility of embedding rules, norms and preferences of the different water user sectors to more realistically represent the behaviours, motives and constraints of individual licence holders. The potential benefits and limitations of such a social simulation (agent-based) approach is contrasted with our simulator where agents are driven by economic optimization. A case study based on the Dove River Basin (UK) demonstrates model inputs and outputs. The ability of the model to suggest impacts of water rights policy reforms on trading is discussed.
Projective interpretation of some doubly special relativity theories
International Nuclear Information System (INIS)
Jafari, N.; Shariati, A.
2011-01-01
A class of projective actions of the orthogonal group on the projective space is being studied. It is shown that the Fock-Lorentz and Magueijo-Smolin transformations known as doubly special relativity are such transformations. The formalism easily leads to new types of transformations.
Nikolakopoulou, Adriani; Mavridis, Dimitris; Furukawa, Toshi A; Cipriani, Andrea; Tricco, Andrea C; Straus, Sharon E; Siontis, George C M; Egger, Matthias; Salanti, Georgia
2018-02-28
To examine whether the continuous updating of networks of prospectively planned randomised controlled trials (RCTs) ("living" network meta-analysis) provides strong evidence against the null hypothesis in comparative effectiveness of medical interventions earlier than the updating of conventional, pairwise meta-analysis. Empirical study of the accumulating evidence about the comparative effectiveness of clinical interventions. Database of network meta-analyses of RCTs identified through searches of Medline, Embase, and the Cochrane Database of Systematic Reviews until 14 April 2015. Network meta-analyses published after January 2012 that compared at least five treatments and included at least 20 RCTs. Clinical experts were asked to identify in each network the treatment comparison of greatest clinical interest. Comparisons were excluded for which direct and indirect evidence disagreed, based on side, or node, splitting test (Pmeta-analyses were performed for each selected comparison. Monitoring boundaries of statistical significance were constructed and the evidence against the null hypothesis was considered to be strong when the monitoring boundaries were crossed. A significance level was defined as α=5%, power of 90% (β=10%), and an anticipated treatment effect to detect equal to the final estimate from the network meta-analysis. The frequency and time to strong evidence was compared against the null hypothesis between pairwise and network meta-analyses. 49 comparisons of interest from 44 networks were included; most (n=39, 80%) were between active drugs, mainly from the specialties of cardiology, endocrinology, psychiatry, and rheumatology. 29 comparisons were informed by both direct and indirect evidence (59%), 13 by indirect evidence (27%), and 7 by direct evidence (14%). Both network and pairwise meta-analysis provided strong evidence against the null hypothesis for seven comparisons, but for an additional 10 comparisons only network meta-analysis provided
Pairwise correlations via quantum discord and its geometric measure in a four-qubit spin chain
Directory of Open Access Journals (Sweden)
Abdel-Baset A. Mohamed
2013-04-01
Full Text Available The dynamic of pairwise correlations, including quantum entanglement (QE and discord (QD with geometric measure of quantum discord (GMQD, are shown in the four-qubit Heisenberg XX spin chain. The results show that the effect of the entanglement degree of the initial state on the pairwise correlations is stronger for alternate qubits than it is for nearest-neighbor qubits. This parameter results in sudden death for QE, but it cannot do so for QD and GMQD. With different values for this entanglement parameter of the initial state, QD and GMQD differ and are sensitive for any change in this parameter. It is found that GMQD is more robust than both QD and QE to describe correlations with nonzero values, which offers a valuable resource for quantum computation.
Aspects of Orthogonality in the Development of the National Digital Wealth (NDW
Directory of Open Access Journals (Sweden)
Ion IVAN
2014-01-01
Full Text Available There are presented aspects of orthogonality in the development of the national digital wealth. There is presented the concept of NDW. Are identified quality characteristics. Are built orthogonality metrics for software development applications which are parts of NDW.
Energy Technology Data Exchange (ETDEWEB)
Starke, G. [Universitaet Karlsruhe (Germany)
1994-12-31
For nonselfadjoint elliptic boundary value problems which are preconditioned by a substructuring method, i.e., nonoverlapping domain decomposition, the author introduces and studies the concept of subspace orthogonalization. In subspace orthogonalization variants of Krylov methods the computation of inner products and vector updates, and the storage of basis elements is restricted to a (presumably small) subspace, in this case the edge and vertex unknowns with respect to the partitioning into subdomains. The author investigates subspace orthogonalization for two specific iterative algorithms, GMRES and the full orthogonalization method (FOM). This is intended to eliminate certain drawbacks of the Arnoldi-based Krylov subspace methods mentioned above. Above all, the length of the Arnoldi recurrences grows linearly with the iteration index which is therefore restricted to the number of basis elements that can be held in memory. Restarts become necessary and this often results in much slower convergence. The subspace orthogonalization methods, in contrast, require the storage of only the edge and vertex unknowns of each basis element which means that one can iterate much longer before restarts become necessary. Moreover, the computation of inner products is also restricted to the edge and vertex points which avoids the disturbance of the computational flow associated with the solution of subdomain problems. The author views subspace orthogonalization as an alternative to restarting or truncating Krylov subspace methods for nonsymmetric linear systems of equations. Instead of shortening the recurrences, one restricts them to a subset of the unknowns which has to be carefully chosen in order to be able to extend this partial solution to the entire space. The author discusses the convergence properties of these iteration schemes and its advantages compared to restarted or truncated versions of Krylov methods applied to the full preconditioned system.
Crossover ensembles of random matrices and skew-orthogonal polynomials
International Nuclear Information System (INIS)
Kumar, Santosh; Pandey, Akhilesh
2011-01-01
Highlights: → We study crossover ensembles of Jacobi family of random matrices. → We consider correlations for orthogonal-unitary and symplectic-unitary crossovers. → We use the method of skew-orthogonal polynomials and quaternion determinants. → We prove universality of spectral correlations in crossover ensembles. → We discuss applications to quantum conductance and communication theory problems. - Abstract: In a recent paper (S. Kumar, A. Pandey, Phys. Rev. E, 79, 2009, p. 026211) we considered Jacobi family (including Laguerre and Gaussian cases) of random matrix ensembles and reported exact solutions of crossover problems involving time-reversal symmetry breaking. In the present paper we give details of the work. We start with Dyson's Brownian motion description of random matrix ensembles and obtain universal hierarchic relations among the unfolded correlation functions. For arbitrary dimensions we derive the joint probability density (jpd) of eigenvalues for all transitions leading to unitary ensembles as equilibrium ensembles. We focus on the orthogonal-unitary and symplectic-unitary crossovers and give generic expressions for jpd of eigenvalues, two-point kernels and n-level correlation functions. This involves generalization of the theory of skew-orthogonal polynomials to crossover ensembles. We also consider crossovers in the circular ensembles to show the generality of our method. In the large dimensionality limit, correlations in spectra with arbitrary initial density are shown to be universal when expressed in terms of a rescaled symmetry breaking parameter. Applications of our crossover results to communication theory and quantum conductance problems are also briefly discussed.
An Orthogonal Learning Differential Evolution Algorithm for Remote Sensing Image Registration
Directory of Open Access Journals (Sweden)
Wenping Ma
2014-01-01
Full Text Available We introduce an area-based method for remote sensing image registration. We use orthogonal learning differential evolution algorithm to optimize the similarity metric between the reference image and the target image. Many local and global methods have been used to achieve the optimal similarity metric in the last few years. Because remote sensing images are usually influenced by large distortions and high noise, local methods will fail in some cases. For this reason, global methods are often required. The orthogonal learning (OL strategy is efficient when searching in complex problem spaces. In addition, it can discover more useful information via orthogonal experimental design (OED. Differential evolution (DE is a heuristic algorithm. It has shown to be efficient in solving the remote sensing image registration problem. So orthogonal learning differential evolution algorithm (OLDE is efficient for many optimization problems. The OLDE method uses the OL strategy to guide the DE algorithm to discover more useful information. Experiments show that the OLDE method is more robust and efficient for registering remote sensing images.
Secrecy Capacity of a Class of Orthogonal Relay Eavesdropper Channels
Directory of Open Access Journals (Sweden)
Aggarwal Vaneet
2009-01-01
Full Text Available The secrecy capacity of relay channels with orthogonal components is studied in the presence of an additional passive eavesdropper node. The relay and destination receive signals from the source on two orthogonal channels such that the destination also receives transmissions from the relay on its channel. The eavesdropper can overhear either one or both of the orthogonal channels. Inner and outer bounds on the secrecy capacity are developed for both the discrete memoryless and the Gaussian channel models. For the discrete memoryless case, the secrecy capacity is shown to be achieved by a partial decode-and-forward (PDF scheme when the eavesdropper can overhear only one of the two orthogonal channels. Two new outer bounds are presented for the Gaussian model using recent capacity results for a Gaussian multiantenna point-to-point channel with a multiantenna eavesdropper. The outer bounds are shown to be tight for two subclasses of channels. The first subclass is one in which the source and relay are clustered, and the eavesdropper receives signals only on the channel from the source and the relay to the destination, for which the PDF strategy is optimal. The second is a subclass in which the source does not transmit to the relay, for which a noise-forwarding strategy is optimal.
Spin nematic and orthogonal nematic states in S=1 non-Heisenberg magnet
International Nuclear Information System (INIS)
Fridman, Yu.A.; Kosmachev, O.A.; Klevets, Ph.N.
2013-01-01
Phases of S=1 non-Heisenberg magnet at various relationships between the exchange integrals are studied in the mean-field limit at zero temperature. It is shown that four phases can be realized in the system under consideration: the ferromagnetic, antiferromagnetic, nematic, and the orthogonal nematic states. The phase diagram is constructed. It is shown that the phase transitions between the ferromagnetic phase and the orthogonal nematic phase and between the antiferromagnetic phase and the orthogonal nematic phase are the degenerated first-order transitions. For the first time the spectra of elementary excitations in all phases are obtained within the mean-field limit. - Highlights: ► We investigated phases of S=1 non-Heisenberg magnet. ► Found four phases: ferromagnetic, antiferromagnetic, nematic, and orthogonal nematic. ► The phase diagram is determined. ► The spectra of elementary excitations are obtained in all phases for the first time.
Exploring linear algebra labs and projects with Mathematica
Arangala, Crista
2014-01-01
Matrix Operations Lab 0: An Introduction to Mathematica Lab 1: Matrix Basics and Operations Lab 2: A Matrix Representation of Linear Systems Lab 3: Powers, Inverses, and Special Matrices Lab 4: Graph Theory and Adjacency Matrices Lab 5: Permutations and Determinants Lab 6: 4 x 4 Determinants and Beyond Project Set 1 Invertibility Lab 7: Singular or Nonsingular? Why Singularity Matters Lab 8: Mod It Out, Matrices with Entries in ZpLab 9: It's a Complex World Lab 10: Declaring Independence: Is It Linear? Project Set 2 Vector Spaces Lab 11: Vector Spaces and SubspacesLab 12: Basing It All on Just a Few Vectors Lab 13: Linear Transformations Lab 14: Eigenvalues and Eigenspaces Lab 15: Markov Chains, An Application of Eigenvalues Project Set 3 Orthogonality Lab 16: Inner Product Spaces Lab 17: The Geometry of Vector and Inner Product SpacesLab 18: Orthogonal Matrices, QR Decomposition, and Least Squares Regression Lab 19: Symmetric Matrices and Quadratic Forms Project Set 4 Matrix Decomposition with Applications L...
Directory of Open Access Journals (Sweden)
Woosang Lim
Full Text Available Hierarchical organizations of information processing in the brain networks have been known to exist and widely studied. To find proper hierarchical structures in the macaque brain, the traditional methods need the entire pairwise hierarchical relationships between cortical areas. In this paper, we present a new method that discovers hierarchical structures of macaque brain networks by using partial information of pairwise hierarchical relationships. Our method uses a graph-based manifold learning to exploit inherent relationship, and computes pseudo distances of hierarchical levels for every pair of cortical areas. Then, we compute hierarchy levels of all cortical areas by minimizing the sum of squared hierarchical distance errors with the hierarchical information of few cortical areas. We evaluate our method on the macaque brain data sets whose true hierarchical levels are known as the FV91 model. The experimental results show that hierarchy levels computed by our method are similar to the FV91 model, and its errors are much smaller than the errors of hierarchical clustering approaches.
Bio-inspired supramolecular materials by orthogonal self-assembly of hydrogelators and phospholipids
Boekhoven, J.; Brizard, AMA; Stuart, M. C A; Florusse, L.J.; Raffy, G.; Del Guerzo, A.; van Esch, J.H.
2016-01-01
The orthogonal self-assembly of multiple components is a powerful strategy towards the formation of complex biomimetic architectures, but so far the rules for designing such systems are unclear. Here we show how to identify orthogonal self-assembly at the supramolecular level and describe
Efficiency Improvements of Antenna Optimization Using Orthogonal Fractional Experiments
Directory of Open Access Journals (Sweden)
Yen-Sheng Chen
2015-01-01
Full Text Available This paper presents an extremely efficient method for antenna design and optimization. Traditionally, antenna optimization relies on nature-inspired heuristic algorithms, which are time-consuming due to their blind-search nature. In contrast, design of experiments (DOE uses a completely different framework from heuristic algorithms, reducing the design cycle by formulating the surrogates of a design problem. However, the number of required simulations grows exponentially if a full factorial design is used. In this paper, a much more efficient technique is presented to achieve substantial time savings. By using orthogonal fractional experiments, only a small subset of the full factorial design is required, yet the resultant response surface models are still effective. The capability of orthogonal fractional experiments is demonstrated through three examples, including two tag antennas for radio-frequency identification (RFID applications and one internal antenna for long-term-evolution (LTE handheld devices. In these examples, orthogonal fractional experiments greatly improve the efficiency of DOE, thereby facilitating the antenna design with less simulation runs.
Nonparametric predictive pairwise comparison with competing risks
International Nuclear Information System (INIS)
Coolen-Maturi, Tahani
2014-01-01
In reliability, failure data often correspond to competing risks, where several failure modes can cause a unit to fail. This paper presents nonparametric predictive inference (NPI) for pairwise comparison with competing risks data, assuming that the failure modes are independent. These failure modes could be the same or different among the two groups, and these can be both observed and unobserved failure modes. NPI is a statistical approach based on few assumptions, with inferences strongly based on data and with uncertainty quantified via lower and upper probabilities. The focus is on the lower and upper probabilities for the event that the lifetime of a future unit from one group, say Y, is greater than the lifetime of a future unit from the second group, say X. The paper also shows how the two groups can be compared based on particular failure mode(s), and the comparison of the two groups when some of the competing risks are combined is discussed
PairWise Neighbours database: overlaps and spacers among prokaryote genomes
Directory of Open Access Journals (Sweden)
Garcia-Vallvé Santiago
2009-06-01
Full Text Available Abstract Background Although prokaryotes live in a variety of habitats and possess different metabolic and genomic complexity, they have several genomic architectural features in common. The overlapping genes are a common feature of the prokaryote genomes. The overlapping lengths tend to be short because as the overlaps become longer they have more risk of deleterious mutations. The spacers between genes tend to be short too because of the tendency to reduce the non coding DNA among prokaryotes. However they must be long enough to maintain essential regulatory signals such as the Shine-Dalgarno (SD sequence, which is responsible of an efficient translation. Description PairWise Neighbours is an interactive and intuitive database used for retrieving information about the spacers and overlapping genes among bacterial and archaeal genomes. It contains 1,956,294 gene pairs from 678 fully sequenced prokaryote genomes and is freely available at the URL http://genomes.urv.cat/pwneigh. This database provides information about the overlaps and their conservation across species. Furthermore, it allows the wide analysis of the intergenic regions providing useful information such as the location and strength of the SD sequence. Conclusion There are experiments and bioinformatic analysis that rely on correct annotations of the initiation site. Therefore, a database that studies the overlaps and spacers among prokaryotes appears to be desirable. PairWise Neighbours database permits the reliability analysis of the overlapping structures and the study of the SD presence and location among the adjacent genes, which may help to check the annotation of the initiation sites.
Polar plate theory for orthogonal anisotropy
Bailey, Michelle D.
1998-11-01
The following paper discusses the derivation and evaluation of the plate equations for a circular composite disk with orthogonal anisotropy. The work will be on a macromechanical level and include buckling, static and dynamic load applications. Necessary to a complete examination of the circular disk is the conversion of the stiffness matrix to cylindrical coordinates. In the transformed state, these coefficients are no longer constant, adding to the complexity of the proposed differential equations. Laminated fiber-reinforced (or filamentary) composites are used today for their high strength-to weight and stiffness-to-weight ratios. However, because of the typical anisotropic behavior of composites, determining the material properties on a microscopic level and the mechanics on a macroscopic level is much more difficult. This difficulty manifests itself particularly well in the evaluation of material properties and governing differential equations of a circular disk with the fibers of the lamina oriented orthogonally. One could encounter such a situation in space structures that require a circular geometry. For example, determining fastener pull through in a circular composite plate would best be performed in a polar coordinate system. In order to calculate the strain (which is a function of the angle, θ) from the displacements, the stiffness matrix and boundary conditions would need to be expressed in cylindrical coordinates. Naturally the composite would be constructed with fibers in orthogonal directions, then the necessary geometry would be cut out, thus the required lengthy transformation of coordinate systems. To bypass this derivation, numerical methods have been used and finite element models have been attempted. FEM over predicts plate stiffness by 20% and underpredicts failure by 70%. Obviously there is a need to transform classical plate theory to a cylindrical coordinate system.
Orthogonal Expansions for VIX Options Under Affine Jump Diffusions
DEFF Research Database (Denmark)
Barletta, Andrea; Nicolato, Elisa
2017-01-01
In this work we derive new closed–form pricing formulas for VIX options in the jump-diffusion SVJJ model proposed by Duffie et al. (2000). Our approach is based on the classic methodology of approximating a density function with an orthogonal expansion of polynomials weighted by a kernel. Orthogo......In this work we derive new closed–form pricing formulas for VIX options in the jump-diffusion SVJJ model proposed by Duffie et al. (2000). Our approach is based on the classic methodology of approximating a density function with an orthogonal expansion of polynomials weighted by a kernel...
Pairwise comparisons and visual perceptions of equal area polygons.
Adamic, P; Babiy, V; Janicki, R; Kakiashvili, T; Koczkodaj, W W; Tadeusiewicz, R
2009-02-01
The number of studies related to visual perception has been plentiful in recent years. Participants rated the areas of five randomly generated shapes of equal area, using a reference unit area that was displayed together with the shapes. Respondents were 179 university students from Canada and Poland. The average error estimated by respondents using the unit square was 25.75%. The error was substantially decreased to 5.51% when the shapes were compared to one another in pairs. This gain of 20.24% for this two-dimensional experiment was substantially better than the 11.78% gain reported in the previous one-dimensional experiments. This is the first statistically sound two-dimensional experiment demonstrating that pairwise comparisons improve accuracy.
Predicting community composition from pairwise interactions
Friedman, Jonathan; Higgins, Logan; Gore, Jeff
The ability to predict the structure of complex, multispecies communities is crucial for understanding the impact of species extinction and invasion on natural communities, as well as for engineering novel, synthetic communities. Communities are often modeled using phenomenological models, such as the classical generalized Lotka-Volterra (gLV) model. While a lot of our intuition comes from such models, their predictive power has rarely been tested experimentally. To directly assess the predictive power of this approach, we constructed synthetic communities comprised of up to 8 soil bacteria. We measured the outcome of competition between all species pairs, and used these measurements to predict the composition of communities composed of more than 2 species. The pairwise competitions resulted in a diverse set of outcomes, including coexistence, exclusion, and bistability, and displayed evidence for both interference and facilitation. Most pair outcomes could be captured by the gLV framework, and the composition of multispecies communities could be predicted for communities composed solely of such pairs. Our results demonstrate the predictive ability and utility of simple phenomenology, which enables accurate predictions in the absence of mechanistic details.
A summation procedure for expansions in orthogonal polynomials
International Nuclear Information System (INIS)
Garibotti, C.R.; Grinstein, F.F.
1977-01-01
Approximants to functions defined by formal series expansions in orthogonal polynomials are introduced. They are shown to be convergent even out of the elliptical domain where the original expansion converges
Denman, Daniel J; Contreras, Diego
2014-10-01
Neural responses to sensory stimuli are not independent. Pairwise correlation can reduce coding efficiency, occur independent of stimulus representation, or serve as an additional channel of information, depending on the timescale of correlation and the method of decoding. Any role for correlation depends on its magnitude and structure. In sensory areas with maps, like the orientation map in primary visual cortex (V1), correlation is strongly related to the underlying functional architecture, but it is unclear whether this correlation structure is an essential feature of the system or arises from the arrangement of cells in the map. We assessed the relationship between functional architecture and pairwise correlation by measuring both synchrony and correlated spike count variability in mouse V1, which lacks an orientation map. We observed significant pairwise synchrony, which was organized by distance and relative orientation preference between cells. We also observed nonzero correlated variability in both the anesthetized (0.16) and awake states (0.18). Our results indicate that the structure of pairwise correlation is maintained in the absence of an underlying anatomical organization and may be an organizing principle of the mammalian visual system preserved by nonrandom connectivity within local networks. © The Author 2013. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.
Quantum secret sharing using orthogonal multiqudit entangled states
Bai, Chen-Ming; Li, Zhi-Hui; Liu, Cheng-Ji; Li, Yong-Ming
2017-12-01
In this work, we investigate the distinguishability of orthogonal multiqudit entangled states under restricted local operations and classical communication. According to these properties, we propose a quantum secret sharing scheme to realize three types of access structures, i.e., the ( n, n)-threshold, the restricted (3, n)-threshold and restricted (4, n)-threshold schemes (called LOCC-QSS scheme). All cooperating players in the restricted threshold schemes are from two disjoint groups. In the proposed protocol, the participants use the computational basis measurement and classical communication to distinguish between those orthogonal states and reconstruct the original secret. Furthermore, we also analyze the security of our scheme in four primary quantum attacks and give a simple encoding method in order to better prevent the participant conspiracy attack.
Energy Technology Data Exchange (ETDEWEB)
Barbaro, M. [ENEA, Centro Ricerche `Ezio Clementel`, Bologna (Italy). Dipt. Innovazione
1997-11-01
A numerical method is described which generates an orthogonal curvilinear mesh, subject to the constraint that mesh lines are matched to all boundaries of a closed, simply connected two-dimensional region of arbitrary shape. The method is based on the solution, by an iterative finite-difference technique, of an elliptic differential system of equations for the Cartesian coordinates of the orthogonal grid nodes. The interior grid distribution is controlled by a technique which ensures that coordinate lines can be concentrated as desired. Examples of orthogonal meshes inscribed in various geometrical figures are included.
Method of orthogonally splitting imaging pose measurement
Zhao, Na; Sun, Changku; Wang, Peng; Yang, Qian; Liu, Xintong
2018-01-01
In order to meet the aviation's and machinery manufacturing's pose measurement need of high precision, fast speed and wide measurement range, and to resolve the contradiction between measurement range and resolution of vision sensor, this paper proposes an orthogonally splitting imaging pose measurement method. This paper designs and realizes an orthogonally splitting imaging vision sensor and establishes a pose measurement system. The vision sensor consists of one imaging lens, a beam splitter prism, cylindrical lenses and dual linear CCD. Dual linear CCD respectively acquire one dimensional image coordinate data of the target point, and two data can restore the two dimensional image coordinates of the target point. According to the characteristics of imaging system, this paper establishes the nonlinear distortion model to correct distortion. Based on cross ratio invariability, polynomial equation is established and solved by the least square fitting method. After completing distortion correction, this paper establishes the measurement mathematical model of vision sensor, and determines intrinsic parameters to calibrate. An array of feature points for calibration is built by placing a planar target in any different positions for a few times. An terative optimization method is presented to solve the parameters of model. The experimental results show that the field angle is 52 °, the focus distance is 27.40 mm, image resolution is 5185×5117 pixels, displacement measurement error is less than 0.1mm, and rotation angle measurement error is less than 0.15°. The method of orthogonally splitting imaging pose measurement can satisfy the pose measurement requirement of high precision, fast speed and wide measurement range.
Automorphisms of Algebras and Bochner's Property for Vector Orthogonal Polynomials
Horozov, Emil
2016-05-01
We construct new families of vector orthogonal polynomials that have the property to be eigenfunctions of some differential operator. They are extensions of the Hermite and Laguerre polynomial systems. A third family, whose first member has been found by Y. Ben Cheikh and K. Douak is also constructed. The ideas behind our approach lie in the studies of bispectral operators. We exploit automorphisms of associative algebras which transform elementary vector orthogonal polynomial systems which are eigenfunctions of a differential operator into other systems of this type.
The advantages of orthogonal acceleration in ICP time-of-flight mass spectrometry
International Nuclear Information System (INIS)
Gaal, Andrew
2004-01-01
The OptiMass 8000 incorporates an orthogonal acceleration time-of-flight mass spectrometer. A general schematic of the instrument is given. The continuous ion beam is chopped by an orthogonal accelerator. A push out pulse supply is coupled to the accelerator for providing repetitive push-out voltages at a frequency of 30 kHz. The ion packets that are sliced out of the beam then travel within the field free space towards the SMARTGATE ion blanker. Orthogonal accelerator parameters are set to enable temporal-spatial focusing at the SMARTGATE ion blanker, so that iso-mass ion packets are resolved in time. Any ion packets of unwanted specie are ejected from the direction of travel by supplying pulsed voltages onto the deflection plates of the SMARTGATE. The ions to be measured are let through SMARTGATE and travel further down the field free space, to enter the ion reflectron. The ion reflectron increases the resolution of the mass spectrometer by means of temporal-energy focussing. After reflection, the ions travel within the field free space towards the discrete-dynode detector. In comparison to other acceleration geometries used in elemental time-of-flight mass spectrometry the OptiMass 8000 orthogonal acceleration geometry ultimately leads to superior resolution. As the energy spread is about 3 orders of magnitude lower in the time-of-flight direction for an oaTOFMS in comparison to an on-axis system, aberration acquired in the initial stages of acceleration are much lower. As a result the orthogonal acceleration scheme provides superior resolution at the first spatial focus point and the detector. The orthogonal acceleration time-of-flight analyzer of the OptiMass 8000 is able to provide resolution of at least 1800 at mass 238. (author)
Extended abstract: Partial row projection methods
Energy Technology Data Exchange (ETDEWEB)
Bramley, R.; Lee, Y. [Indiana Univ., Bloomington, IN (United States)
1996-12-31
Accelerated row projection (RP) algorithms for solving linear systems Ax = b are a class of iterative methods which in theory converge for any nonsingular matrix. RP methods are by definition ones that require finding the orthogonal projection of vectors onto the null space of block rows of the matrix. The Kaczmarz form, considered here because it has a better spectrum for iterative methods, has an iteration matrix that is the product of such projectors. Because straightforward Kaczmarz method converges slowly for practical problems, typically an outer CG acceleration is applied. Definiteness, symmetry, or localization of the eigenvalues, of the coefficient matrix is not required. In spite of this robustness, work has generally been limited to structured systems such as block tridiagonal matrices because unlike many iterative solvers, RP methods cannot be implemented by simply supplying a matrix-vector multiplication routine. Finding the orthogonal projection of vectors onto the null space of block rows of the matrix in practice requires accessing the actual entries in the matrix. This report introduces a new partial RP algorithm which retains advantages of the RP methods.
Maréchal Eric; Ortet Philippe; Roy Sylvaine; Bastien Olivier
2005-01-01
Abstract Background Popular methods to reconstruct molecular phylogenies are based on multiple sequence alignments, in which addition or removal of data may change the resulting tree topology. We have sought a representation of homologous proteins that would conserve the information of pair-wise sequence alignments, respect probabilistic properties of Z-scores (Monte Carlo methods applied to pair-wise comparisons) and be the basis for a novel method of consistent and stable phylogenetic recon...
Minimal parameter solution of the orthogonal matrix differential equation
Bar-Itzhack, Itzhack Y.; Markley, F. Landis
1990-01-01
As demonstrated in this work, all orthogonal matrices solve a first order differential equation. The straightforward solution of this equation requires n sup 2 integrations to obtain the element of the nth order matrix. There are, however, only n(n-1)/2 independent parameters which determine an orthogonal matrix. The questions of choosing them, finding their differential equation and expressing the orthogonal matrix in terms of these parameters are considered. Several possibilities which are based on attitude determination in three dimensions are examined. It is shown that not all 3-D methods have useful extensions to higher dimensions. It is also shown why the rate of change of the matrix elements, which are the elements of the angular rate vector in 3-D, are the elements of a tensor of the second rank (dyadic) in spaces other than three dimensional. It is proven that the 3-D Gibbs vector (or Cayley Parameters) are extendable to other dimensions. An algorithm is developed emplying the resulting parameters, which are termed Extended Rodrigues Parameters, and numerical results are presented of the application of the algorithm to a fourth order matrix.
Representations for the extreme zeros of orthogonal polynomials (vol 233, pg 847, 2009)
van Doorn, Erik A.; van Foreest, Nicky D.; Zeifman, Alexander I.
2013-01-01
We correct representations for the endpoints of the true interval of orthogonality of a sequence of orthogonal polynomials that were stated by us in the Journal of Computational and Applied Mathematics 233 (2009) 847-851. (c) 2013 Elsevier B.V. All rights reserved.
2017-10-01
AWARD NUMBER: W81XWH-16-1-0595 TITLE: Prostate-Specific Membrane Antigen (PSMA) Targeted Bio -orthogonal Therapy for Metastatic Prostate Cancer...Sep 2016 - 14 Sep 2017 4. TITLE AND SUBTITLE Prostate-Specific Membrane Antigen (PSMA) Targeted Bio -orthogonal Therapy for Metastatic Prostate
Julia Sets of Orthogonal Polynomials
DEFF Research Database (Denmark)
Christiansen, Jacob Stordal; Henriksen, Christian; Petersen, Henrik Laurberg
2018-01-01
For a probability measure with compact and non-polar support in the complex plane we relate dynamical properties of the associated sequence of orthogonal polynomials fPng to properties of the support. More precisely we relate the Julia set of Pn to the outer boundary of the support, the lled Julia...... set to the polynomial convex hull K of the support, and the Green's function associated with Pn to the Green's function for the complement of K....
Efficient decoupling schemes with bounded controls based on Eulerian orthogonal arrays
International Nuclear Information System (INIS)
Wocjan, Pawel
2006-01-01
The task of decoupling, i.e., removing unwanted internal couplings of a quantum system and its couplings to an environment, plays an important role in quantum control theory. There are many efficient decoupling schemes based on combinatorial concepts such as orthogonal arrays, difference schemes, and Hadamard matrices. So far these combinatorial decoupling schemes have relied on the ability to effect sequences of instantaneous, arbitrarily strong control Hamiltonians (bang-bang controls). To overcome the shortcomings of bang-bang control, Viola and Knill proposed a method called 'Eulerian decoupling' that allows the use of bounded-strength controls for decoupling. However, their method was not directly designed to take advantage of the local structure of internal couplings and couplings to an environment that typically occur in multipartite quantum systems. In this paper we define a combinatorial structure called Eulerian orthogonal array. It merges the desirable properties of orthogonal arrays and Eulerian cycles in Cayley graphs (that are the basis of Eulerian decoupling). We show that this structure gives rise to decoupling schemes with bounded-strength control Hamiltonians that can be used to remove both internal couplings and couplings to an environment of a multipartite quantum system. Furthermore, we show how to construct Eulerian orthogonal arrays having good parameters in order to obtain efficient decoupling schemes
Improving pairwise comparison of protein sequences with domain co-occurrence
Gascuel, Olivier
2018-01-01
Comparing and aligning protein sequences is an essential task in bioinformatics. More specifically, local alignment tools like BLAST are widely used for identifying conserved protein sub-sequences, which likely correspond to protein domains or functional motifs. However, to limit the number of false positives, these tools are used with stringent sequence-similarity thresholds and hence can miss several hits, especially for species that are phylogenetically distant from reference organisms. A solution to this problem is then to integrate additional contextual information to the procedure. Here, we propose to use domain co-occurrence to increase the sensitivity of pairwise sequence comparisons. Domain co-occurrence is a strong feature of proteins, since most protein domains tend to appear with a limited number of other domains on the same protein. We propose a method to take this information into account in a typical BLAST analysis and to construct new domain families on the basis of these results. We used Plasmodium falciparum as a case study to evaluate our method. The experimental findings showed an increase of 14% of the number of significant BLAST hits and an increase of 25% of the proteome area that can be covered with a domain. Our method identified 2240 new domains for which, in most cases, no model of the Pfam database could be linked. Moreover, our study of the quality of the new domains in terms of alignment and physicochemical properties show that they are close to that of standard Pfam domains. Source code of the proposed approach and supplementary data are available at: https://gite.lirmm.fr/menichelli/pairwise-comparison-with-cooccurrence PMID:29293498
Bouillot, Vincent R.; Alimi, Jean-Michel; Corasaniti, Pier-Stefano; Rasera, Yann
2015-06-01
Observations of colliding galaxy clusters with high relative velocity probe the tail of the halo pairwise velocity distribution with the potential of providing a powerful test of cosmology. As an example it has been argued that the discovery of the Bullet Cluster challenges standard Λ cold dark matter (ΛCDM) model predictions. Halo catalogues from N-body simulations have been used to estimate the probability of Bullet-like clusters. However, due to simulation volume effects previous studies had to rely on a Gaussian extrapolation of the pairwise velocity distribution to high velocities. Here, we perform a detail analysis using the halo catalogues from the Dark Energy Universe Simulation Full Universe Runs (DEUS-FUR), which enables us to resolve the high-velocity tail of the distribution and study its dependence on the halo mass definition, redshift and cosmology. Building upon these results, we estimate the probability of Bullet-like systems in the framework of Extreme Value Statistics. We show that the tail of extreme pairwise velocities significantly deviates from that of a Gaussian, moreover it carries an imprint of the underlying cosmology. We find the Bullet Cluster probability to be two orders of magnitude larger than previous estimates, thus easing the tension with the ΛCDM model. Finally, the comparison of the inferred probabilities for the different DEUS-FUR cosmologies suggests that observations of extreme interacting clusters can provide constraints on dark energy models complementary to standard cosmological tests.
Eisinga, R.N.; Heskes, T.M.; Pelzer, B.J.; Grotenhuis, H.F. te
2017-01-01
Background: The Friedman rank sum test is a widely-used nonparametric method in computational biology. In addition to examining the overall null hypothesis of no significant difference among any of the rank sums, it is typically of interest to conduct pairwise comparison tests. Current approaches to
Using orthogonal design to determine optimal conditions for ...
African Journals Online (AJOL)
African Journal of Biotechnology ... Because of the narrow genetic diversity of common wheat and elite agronomic traits of many wild relatives, it is very ... Key words: Protoplast, fusion, orthogonal design method, Mingxian 169, Y2155a.
Designing Uniquely Addressable Bio-orthogonal Synthetic Scaffolds for DNA and RNA Origami.
Kozyra, Jerzy; Ceccarelli, Alessandro; Torelli, Emanuela; Lopiccolo, Annunziata; Gu, Jing-Ying; Fellermann, Harold; Stimming, Ulrich; Krasnogor, Natalio
2017-07-21
Nanotechnology and synthetic biology are rapidly converging, with DNA origami being one of the leading bridging technologies. DNA origami was shown to work well in a wide array of biotic environments. However, the large majority of extant DNA origami scaffolds utilize bacteriophages or plasmid sequences thus severely limiting its future applicability as a bio-orthogonal nanotechnology platform. In this paper we present the design of biologically inert (i.e., "bio-orthogonal") origami scaffolds. The synthetic scaffolds have the additional advantage of being uniquely addressable (unlike biologically derived ones) and hence are better optimized for high-yield folding. We demonstrate our fully synthetic scaffold design with both DNA and RNA origamis and describe a protocol to produce these bio-orthogonal and uniquely addressable origami scaffolds.
Directory of Open Access Journals (Sweden)
Masjed-Jamei Mohammad
2005-01-01
Full Text Available From the main equation ( a x 2 +bx+c y ″ n ( x +( dx+e y ′ n ( x −n( ( n−1 a+d y n ( x =0 , n∈ ℤ + , six finite and infinite classes of orthogonal polynomials can be extracted. In this work, first we have a survey on these classes, particularly on finite classes, and their corresponding rational orthogonal polynomials, which are generated by Mobius transform x=p z −1 +q , p≠0 , q∈ℝ . Some new integral relations are also given in this section for the Jacobi, Laguerre, and Bessel orthogonal polynomials. Then we show that the rational orthogonal polynomials can be a very suitable tool to compute the inverse Laplace transform directly, with no additional calculation for finding their roots. In this way, by applying infinite and finite rational classical orthogonal polynomials, we give three basic expansions of six ones as a sample for computation of inverse Laplace transform.
An Orthogonal Multi-Swarm Cooperative PSO Algorithm with a Particle Trajectory Knowledge Base
Directory of Open Access Journals (Sweden)
Jun Yang
2017-01-01
Full Text Available A novel orthogonal multi-swarm cooperative particle swarm optimization (PSO algorithm with a particle trajectory knowledge base is presented in this paper. Different from the traditional PSO algorithms and other variants of PSO, the proposed orthogonal multi-swarm cooperative PSO algorithm not only introduces an orthogonal initialization mechanism and a particle trajectory knowledge base for multi-dimensional optimization problems, but also conceives a new adaptive cooperation mechanism to accomplish the information interaction among swarms and particles. Experiments are conducted on a set of benchmark functions, and the results show its better performance compared with traditional PSO algorithm in aspects of convergence, computational efficiency and avoiding premature convergence.
Limited-memory adaptive snapshot selection for proper orthogonal decomposition
Energy Technology Data Exchange (ETDEWEB)
Oxberry, Geoffrey M. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Kostova-Vassilevska, Tanya [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Arrighi, Bill [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Chand, Kyle [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States)
2015-04-02
Reduced order models are useful for accelerating simulations in many-query contexts, such as optimization, uncertainty quantification, and sensitivity analysis. However, offline training of reduced order models can have prohibitively expensive memory and floating-point operation costs in high-performance computing applications, where memory per core is limited. To overcome this limitation for proper orthogonal decomposition, we propose a novel adaptive selection method for snapshots in time that limits offline training costs by selecting snapshots according an error control mechanism similar to that found in adaptive time-stepping ordinary differential equation solvers. The error estimator used in this work is related to theory bounding the approximation error in time of proper orthogonal decomposition-based reduced order models, and memory usage is minimized by computing the singular value decomposition using a single-pass incremental algorithm. Results for a viscous Burgers’ test problem demonstrate convergence in the limit as the algorithm error tolerances go to zero; in this limit, the full order model is recovered to within discretization error. The resulting method can be used on supercomputers to generate proper orthogonal decomposition-based reduced order models, or as a subroutine within hyperreduction algorithms that require taking snapshots in time, or within greedy algorithms for sampling parameter space.
Shamsudin, F.; Midden, C.J.H.
2007-01-01
In this study, we explore whether people’s worldviews are orthogonal. An orthogonal structure of worldviews was found from two independent studies in multi-cultural communities to be affected by a coal power plant technology. The two-dimensional worldview orientations were in rectangular(orthogonal)
Fourier series and orthogonal polynomials
Jackson, Dunham
2004-01-01
This text for undergraduate and graduate students illustrates the fundamental simplicity of the properties of orthogonal functions and their developments in related series. Starting with a definition and explanation of the elements of Fourier series, the text follows with examinations of Legendre polynomials and Bessel functions. Boundary value problems consider Fourier series in conjunction with Laplace's equation in an infinite strip and in a rectangle, with a vibrating string, in three dimensions, in a sphere, and in other circumstances. An overview of Pearson frequency functions is followe
Orthogonal polynomials and random matrices
Deift, Percy
2000-01-01
This volume expands on a set of lectures held at the Courant Institute on Riemann-Hilbert problems, orthogonal polynomials, and random matrix theory. The goal of the course was to prove universality for a variety of statistical quantities arising in the theory of random matrix models. The central question was the following: Why do very general ensembles of random n {\\times} n matrices exhibit universal behavior as n {\\rightarrow} {\\infty}? The main ingredient in the proof is the steepest descent method for oscillatory Riemann-Hilbert problems.
Analysis of Geographic and Pairwise Distances among Chinese Cashmere Goat Populations
Directory of Open Access Journals (Sweden)
Jian-Bin Liu
2013-03-01
Full Text Available This study investigated the geographic and pairwise distances of nine Chinese local Cashmere goat populations through the analysis of 20 microsatellite DNA markers. Fluorescence PCR was used to identify the markers, which were selected based on their significance as identified by the Food and Agriculture Organization of the United Nations (FAO and the International Society for Animal Genetics (ISAG. In total, 206 alleles were detected; the average allele number was 10.30; the polymorphism information content of loci ranged from 0.5213 to 0.7582; the number of effective alleles ranged from 4.0484 to 4.6178; the observed heterozygosity was from 0.5023 to 0.5602 for the practical sample; the expected heterozygosity ranged from 0.5783 to 0.6464; and Allelic richness ranged from 4.7551 to 8.0693. These results indicated that Chinese Cashmere goat populations exhibited rich genetic diversity. Further, the Wright’s F-statistics of subpopulation within total (FST was 0.1184; the genetic differentiation coefficient (GST was 0.0940; and the average gene flow (Nm was 2.0415. All pairwise FST values among the populations were highly significant (p<0.01 or p<0.001, suggesting that the populations studied should all be considered to be separate breeds. Finally, the clustering analysis divided the Chinese Cashmere goat populations into at least four clusters, with the Hexi and Yashan goat populations alone in one cluster. These results have provided useful, practical, and important information for the future of Chinese Cashmere goat breeding.
Orthogonal projections and bootstrap resampling procedures in the study of infraspecific variation
Directory of Open Access Journals (Sweden)
Luiza Carla Duarte
1998-12-01
Full Text Available The effect of an increase in quantitative continuous characters resulting from indeterminate growth upon the analysis of population differentiation was investigated using, as an example, a set of continuous characters measured as distance variables in 10 populations of a rodent species. The data before and after correction for allometric size effects using orthogonal projections were analyzed with a parametric bootstrap resampling procedure applied to canonical variate analysis. The variance component of the distance measures attributable to indeterminate growth within the populations was found to be substantial, although the ordination of the populations was not affected, as evidenced by the relative and absolute positions of the centroids. The covariance pattern of the distance variables used to infer the nature of the morphological differences was strongly influenced by indeterminate growth. The uncorrected data produced a misleading picture of morphological differentiation by indicating that groups of populations differed in size. However, the data corrected for allometric effects clearly demonstrated that populations differed morphologically both in size and shape. These results are discussed in terms of the analysis of morphological differentiation among populations and the definition of infraspecific geographic units.A influência do aumento em caracteres quantitativos contínuos devido ao crescimento indeterminado sobre a análise de diferenciação entre populações foi investigado utilizando como exemplo um conjunto de dados de variáveis craniométricas em 10 populações de uma espécie de roedor. Dois conjuntos de dados, um não corrigido para o efeito alométrico do tamanho e um outro corrigido para o efeito alométrico do tamanho utilizando um método de projeção ortogonal, foram analisados por um procedimento "bootstrap" de reamostragem aplicado à análise de variáveis canônicas. O componente de variância devido ao
Performance analysis of super-orthogonal space-frequency trellis coded OFDM system
CSIR Research Space (South Africa)
Sokoya, O
2009-08-01
Full Text Available that is used with OFDM. SOSFTC-OFDM utilizes the diversities in frequency and space domain by assuming that coding is done along adjacent subcarrier in an OFDM environment. This paper evaluates the exact pairwise error probability (PEP) of the SOSFTC...
Three-dimensional MRI-linac intra-fraction guidance using multiple orthogonal cine-MRI planes.
Bjerre, Troels; Crijns, Sjoerd; af Rosenschöld, Per Munck; Aznar, Marianne; Specht, Lena; Larsen, Rasmus; Keall, Paul
2013-07-21
The introduction of integrated MRI-radiation therapy systems will offer live intra-fraction imaging. We propose a feasible low-latency multi-plane MRI-linac guidance strategy. In this work we demonstrate how interleaved acquired, orthogonal cine-MRI planes can be used for low-latency tracking of the 3D trajectory of a soft-tissue target structure. The proposed strategy relies on acquiring a pre-treatment 3D breath-hold scan, extracting a 3D target template and performing template matching between this 3D template and pairs of orthogonal 2D cine-MRI planes intersecting the target motion path. For a 60 s free-breathing series of orthogonal cine-MRI planes, we demonstrate that the method was capable of accurately tracking the respiration related 3D motion of the left kidney. Quantitative evaluation of the method using a dataset designed for this purpose revealed a translational error of 1.15 mm for a translation of 39.9 mm. We have demonstrated how interleaved acquired, orthogonal cine-MRI planes can be used for online tracking of soft-tissue target volumes.
Amplitude Noise Suppression and Orthogonal Multiplexing Using Injection-Locked Single-Mode VCSEL
DEFF Research Database (Denmark)
Lyubopytov, Vladimir; von Lerber, Tuomo; Lassas, Matti
2017-01-01
We experimentally demonstrate BER reduction and orthogonal modulation using an injection locked single-mode VCSEL. It allows us suppressing an amplitude noise of optical signal and/or double the capacity of an information channel.......We experimentally demonstrate BER reduction and orthogonal modulation using an injection locked single-mode VCSEL. It allows us suppressing an amplitude noise of optical signal and/or double the capacity of an information channel....
Directory of Open Access Journals (Sweden)
Monika GARG
2012-08-01
Full Text Available In this paper, an integrated approach is proposed for non-recursive formulation of connection coefficients of different orthogonal functions in terms of a generic orthogonal function. The application of these coefficients arises when the product of two orthogonal basis functions are to be expressed in terms of single basis functions. Two significant advantages are achieved; one, the non-recursive formulations avoid memory and stack overflows in computer implementations; two, the integrated approach provides for digital hardware once-designed can be used for different functions. Computational savings achieved with the proposed non-recursive formulation vis-à-vis recursive formulation, reported in the literature so far, have been demonstrated using MATLAB PROFILER.
Towards orthogonal Haskell data serialisation
DEFF Research Database (Denmark)
Berthold, Jost
2010-01-01
This paper investigates a novel approach to serialisation of Haskell data structures with a high degree of flexibility, based on runtime support for parallel Haskell on distributed memory platforms. This serialisation has highly desirable and so-far unrivalled properties: it is truly orthogonal...... to evaluation and does not require any type class mechanisms. Especially, (almost) any kind of value can be serialised, including functions and IO actions. We outline the runtime support on which our serialisation is based, and present different versions of the wrapper code in Haskell which can ensure type...
Introduction to Real Orthogonal Polynomials
1992-06-01
uses Green’s functions. As motivation , consider the Dirichlet problem for the unit circle in the plane, which involves finding a harmonic function u(r...xv ; a, b ; q) - TO [q-N ab+’q ; q, xq b. Orthogoy RMotion O0 (bq :q)x p.(q* ; a, b ; q) pg(q’ ; a, b ; q) (q "q), (aq)x (q ; q), (I -abq) (bq ; q... motivation and justi- fication for continued study of the intrinsic structure of orthogonal polynomials. 99 LIST OF REFERENCES 1. Deyer, W. M., ed., CRC
Application of fast orthogonal search to linear and nonlinear stochastic systems
DEFF Research Database (Denmark)
Chon, K H; Korenberg, M J; Holstein-Rathlou, N H
1997-01-01
Standard deterministic autoregressive moving average (ARMA) models consider prediction errors to be unexplainable noise sources. The accuracy of the estimated ARMA model parameters depends on producing minimum prediction errors. In this study, an accurate algorithm is developed for estimating...... linear and nonlinear stochastic ARMA model parameters by using a method known as fast orthogonal search, with an extended model containing prediction errors as part of the model estimation process. The extended algorithm uses fast orthogonal search in a two-step procedure in which deterministic terms...
Application of Orthogonal Design to Optimize Extraction of ...
African Journals Online (AJOL)
Purpose: To optimize the extraction technology of polysaccharides from Cynomorium songaricum Rupr by ultrasonic-assisted extraction (UAE). Methods: Four parameters including ultrasonic power, ratio of raw material to water, extraction temperature, and extraction time were optimized by orthogonal design. The effects of ...
A note on the von Neumann alternating projections algorithm
Czech Academy of Sciences Publication Activity Database
Kopecká, Eva; Reich, S.
2004-01-01
Roč. 5, č. 3 (2004), s. 379-386 ISSN 1345-4773 Institutional research plan: CEZ:AV0Z1019905 Keywords : alternating orthogonal projections * Hilbert space * nearest point mapping Subject RIV: BA - General Mathematics
Pairwise registration of TLS point clouds using covariance descriptors and a non-cooperative game
Zai, Dawei; Li, Jonathan; Guo, Yulan; Cheng, Ming; Huang, Pengdi; Cao, Xiaofei; Wang, Cheng
2017-12-01
It is challenging to automatically register TLS point clouds with noise, outliers and varying overlap. In this paper, we propose a new method for pairwise registration of TLS point clouds. We first generate covariance matrix descriptors with an adaptive neighborhood size from point clouds to find candidate correspondences, we then construct a non-cooperative game to isolate mutual compatible correspondences, which are considered as true positives. The method was tested on three models acquired by two different TLS systems. Experimental results demonstrate that our proposed adaptive covariance (ACOV) descriptor is invariant to rigid transformation and robust to noise and varying resolutions. The average registration errors achieved on three models are 0.46 cm, 0.32 cm and 1.73 cm, respectively. The computational times cost on these models are about 288 s, 184 s and 903 s, respectively. Besides, our registration framework using ACOV descriptors and a game theoretic method is superior to the state-of-the-art methods in terms of both registration error and computational time. The experiment on a large outdoor scene further demonstrates the feasibility and effectiveness of our proposed pairwise registration framework.
Non-orthogonal transmission in multi-user systems with Grassmannian beamforming
Xia, Minghua
2011-06-01
Aiming to achieve the sum-rate capacity in multiuser multi-input multi-output (MIMO) channels with N t antennas implemented at the transmitter, opportunistic beamforming (OBF) generates N t orthonormal beams and serves N t users during each transmission, which results in high scheduling delay over the users, especially in densely populated wireless networks. Non-orthogonal OBF with more than N t transmit beams can be exploited to serve more users simultaneously and further decreases scheduling delay. However, the inter-beam interference will inevitably deteriorate the sum-rate. Therefore, there is a tradeoff between the sum-rate and the increasing number of transmit beams. In this context, the sum-rate of non-orthogonal OBF with N > N t beams are studied, where the transmitter is based on the Grassmannian beamforming. Our results show that non-orthogonal OBF is an interference-limited system. Moreover, when the inter-beam interference reaches its minimum for fixed N t and N, the sum-rate scales as N ln (N/N-N t) and it decreases monotonically with N for fixed N t. Numerical results corroborate the accuracy of our analyses. © 2011 IEEE.
Short-Term Memory in Orthogonal Neural Networks
White, Olivia L.; Lee, Daniel D.; Sompolinsky, Haim
2004-04-01
We study the ability of linear recurrent networks obeying discrete time dynamics to store long temporal sequences that are retrievable from the instantaneous state of the network. We calculate this temporal memory capacity for both distributed shift register and random orthogonal connectivity matrices. We show that the memory capacity of these networks scales with system size.
A class of orthogonal nonrecursive binomial filters.
Haddad, R. A.
1971-01-01
The time- and frequency-domain properties of the orthogonal binomial sequences are presented. It is shown that these sequences, or digital filters based on them, can be generated using adders and delay elements only. The frequency-domain behavior of these nonrecursive binomial filters suggests a number of applications as low-pass Gaussian filters or as inexpensive bandpass filters.
Short-term memory in orthogonal neural networks
International Nuclear Information System (INIS)
White, Olivia L.; Lee, Daniel D.; Sompolinsky, Haim
2004-01-01
We study the ability of linear recurrent networks obeying discrete time dynamics to store long temporal sequences that are retrievable from the instantaneous state of the network. We calculate this temporal memory capacity for both distributed shift register and random orthogonal connectivity matrices. We show that the memory capacity of these networks scales with system size
Characterizing locally distinguishable orthogonal product states
Feng, Yuan; Shi, Yaoyun
2007-01-01
Bennett et al. \\cite{BDF+99} identified a set of orthogonal {\\em product} states in the $3\\otimes 3$ Hilbert space such that reliably distinguishing those states requires non-local quantum operations. While more examples have been found for this counter-intuitive ``nonlocality without entanglement'' phenomenon, a complete and computationally verifiable characterization for all such sets of states remains unknown. In this Letter, we give such a characterization for the $3\\otimes 3$ space.
Orthogonal translation components for the in vivo incorporation of unnatural amino acids
Schultz, Peter G.; Xie, Jianming; Zeng, Huaqiang
2012-07-10
The invention relates to orthogonal pairs of tRNAs and aminoacyl-tRNA synthetases that can incorporate unnatural amino acids into proteins produced in eubacterial host cells such as E. coli, or in a eukaryotic host such as a yeast cell. The invention provides, for example but not limited to, novel orthogonal synthetases, methods for identifying and making the novel synthetases, methods for producing proteins containing unnatural amino acids, and translation systems.
Differentiation by integration using orthogonal polynomials, a survey
Diekema, E.; Koornwinder, T.H.
2012-01-01
This survey paper discusses the history of approximation formulas for n-th order derivatives by integrals involving orthogonal polynomials. There is a large but rather disconnected corpus of literature on such formulas. We give some results in greater generality than in the literature. Notably we
Sparsely-Packetized Predictive Control by Orthogonal Matching Pursuit
DEFF Research Database (Denmark)
Nagahara, Masaaki; Quevedo, Daniel; Østergaard, Jan
2012-01-01
We study packetized predictive control, known to be robust against packet dropouts in networked systems. To obtain sparse packets for rate-limited networks, we design control packets via an ℓ0 optimization, which can be eectively solved by orthogonal matching pursuit. Our formulation ensures...
Convergent cross-mapping and pairwise asymmetric inference.
McCracken, James M; Weigel, Robert S
2014-12-01
Convergent cross-mapping (CCM) is a technique for computing specific kinds of correlations between sets of times series. It was introduced by Sugihara et al. [Science 338, 496 (2012).] and is reported to be "a necessary condition for causation" capable of distinguishing causality from standard correlation. We show that the relationships between CCM correlations proposed by Sugihara et al. do not, in general, agree with intuitive concepts of "driving" and as such should not be considered indicative of causality. It is shown that the fact that the CCM algorithm implies causality is a function of system parameters for simple linear and nonlinear systems. For example, in a circuit containing a single resistor and inductor, both voltage and current can be identified as the driver depending on the frequency of the source voltage. It is shown that the CCM algorithm, however, can be modified to identify relationships between pairs of time series that are consistent with intuition for the considered example systems for which CCM causality analysis provided nonintuitive driver identifications. This modification of the CCM algorithm is introduced as "pairwise asymmetric inference" (PAI) and examples of its use are presented.
Energy Technology Data Exchange (ETDEWEB)
Bernardis, F. De; Vavagiakis, E.M.; Niemack, M.D.; Gallardo, P.A. [Department of Physics, Cornell University, Ithaca, NY 14853 (United States); Aiola, S. [Department of Physics and Astronomy, University of Pittsburgh, and Pittsburgh Particle Physics, Astrophysics, and Cosmology Center, 3941 O' Hara Street, Pittsburgh, PA 15260 (United States); Battaglia, N. [Department of Astrophysical Sciences, Peyton Hall, Princeton University, Princeton, NJ 08544 (United States); Beall, J.; Becker, D.T.; Cho, H.; Fox, A. [National Institute of Standards and Technology, Boulder, CO 80305 (United States); Bond, J.R. [CITA, University of Toronto, 60 St. George St., Toronto, ON M5S 3H8 (Canada); Calabrese, E.; Dunkley, J. [Sub-Department of Astrophysics, University of Oxford, Keble Road, Oxford, OX1 3RH (United Kingdom); Coughlin, K.; Datta, R. [Department of Physics, University of Michigan Ann Arbor, MI 48109 (United States); Devlin, M. [Department of Physics and Astronomy, University of Pennsylvania, 209 South 33rd Street, Philadelphia, PA 19104 (United States); Dunner, R. [Instituto de Astrofísica and Centro de Astro-Ingeniería, Facultad de Física, Pontificia Universidad Católica de Chile, Av. Vicuña Mackenna 4860, 7820436 Macul, Santiago (Chile); Ferraro, S. [Miller Institute for Basic Research in Science, University of California, Berkeley, CA 94720 (United States); Halpern, M. [University of British Columbia, Department of Physics and Astronomy, 6224 Agricultural Road, Vancouver BC V6T 1Z1 (Canada); Hand, N., E-mail: fdeberna@gmail.com [Astronomy Department, University of California, Berkeley, CA 94720 (United States); and others
2017-03-01
We present a new measurement of the kinematic Sunyaev-Zel'dovich effect using data from the Atacama Cosmology Telescope (ACT) and the Baryon Oscillation Spectroscopic Survey (BOSS). Using 600 square degrees of overlapping sky area, we evaluate the mean pairwise baryon momentum associated with the positions of 50,000 bright galaxies in the BOSS DR11 Large Scale Structure catalog. A non-zero signal arises from the large-scale motions of halos containing the sample galaxies. The data fits an analytical signal model well, with the optical depth to microwave photon scattering as a free parameter determining the overall signal amplitude. We estimate the covariance matrix of the mean pairwise momentum as a function of galaxy separation, using microwave sky simulations, jackknife evaluation, and bootstrap estimates. The most conservative simulation-based errors give signal-to-noise estimates between 3.6 and 4.1 for varying galaxy luminosity cuts. We discuss how the other error determinations can lead to higher signal-to-noise values, and consider the impact of several possible systematic errors. Estimates of the optical depth from the average thermal Sunyaev-Zel'dovich signal at the sample galaxy positions are broadly consistent with those obtained from the mean pairwise momentum signal.
Dazard, Jean-Eudes; Ishwaran, Hemant; Mehlotra, Rajeev; Weinberg, Aaron; Zimmerman, Peter
2018-01-01
Unraveling interactions among variables such as genetic, clinical, demographic and environmental factors is essential to understand the development of common and complex diseases. To increase the power to detect such variables interactions associated with clinical time-to-events outcomes, we borrowed established concepts from random survival forest (RSF) models. We introduce a novel RSF-based pairwise interaction estimator and derive a randomization method with bootstrap confidence intervals for inferring interaction significance. Using various linear and nonlinear time-to-events survival models in simulation studies, we first show the efficiency of our approach: true pairwise interaction-effects between variables are uncovered, while they may not be accompanied with their corresponding main-effects, and may not be detected by standard semi-parametric regression modeling and test statistics used in survival analysis. Moreover, using a RSF-based cross-validation scheme for generating prediction estimators, we show that informative predictors may be inferred. We applied our approach to an HIV cohort study recording key host gene polymorphisms and their association with HIV change of tropism or AIDS progression. Altogether, this shows how linear or nonlinear pairwise statistical interactions of variables may be efficiently detected with a predictive value in observational studies with time-to-event outcomes. PMID:29453930
Synthesis of an Orthogonal Topological Analogue of Helicene
DEFF Research Database (Denmark)
Wixe, Torbjörn; Wallentin, Carl‐Johan; Johnson, Magnus T.
2013-01-01
The synthesis of an orthogonal topological pentamer analogue of helicene is presented. This analogue forms a tubular structure with its aromatic systems directed parallel to the axis of propagation, which creates a cavity with the potential to function as a host molecule. The synthetic strategy r...
Constructing General Orthogonal Fractional Factorial Split-Plot Designs
Sartono, B.; Goos, P.; Schoen, E.
2015-01-01
While the orthogonal design of split-plot fractional factorial experiments has received much attention already, there are still major voids in the literature. First, designs with one or more factors acting at more than two levels have not yet been considered. Second, published work on nonregular
On Linear Combinations of Two Orthogonal Polynomial Sequences on the Unit Circle
Directory of Open Access Journals (Sweden)
Suárez C
2010-01-01
Full Text Available Let be a monic orthogonal polynomial sequence on the unit circle. We define recursively a new sequence of polynomials by the following linear combination: , , . In this paper, we give necessary and sufficient conditions in order to make be an orthogonal polynomial sequence too. Moreover, we obtain an explicit representation for the Verblunsky coefficients and in terms of and . Finally, we show the relation between their corresponding Carathéodory functions and their associated linear functionals.
Performance of an Orthogonal Multicarrier CDMA System in a Multicell/Multipath Environment
Energy Technology Data Exchange (ETDEWEB)
Yoon, W.S. [Ajou University, Suwon (Korea)
1999-08-01
We have considered an improved orthogonal multicarrier (MC) CDMA system. This system combines the advantages of both DS-CDMA with a concatenated spreading scheme and an MC modulation technique to combat the effects of a multipath fading channel and intersymbol interference (IS). The performance of the system is analyzed under a multicell, multiuser, and multipath Rician fading channel. The system is shown to outperform the orthogonal MC-CDMA system with a conventional PN sequence. (author). 4 refs., 3 figs.
Cache-Oblivious Planar Orthogonal Range Searching and Counting
DEFF Research Database (Denmark)
Arge, Lars; Brodal, Gerth Stølting; Fagerberg, Rolf
2005-01-01
present the first cache-oblivious data structure for planar orthogonal range counting, and improve on previous results for cache-oblivious planar orthogonal range searching. Our range counting structure uses O(Nlog2 N) space and answers queries using O(logB N) memory transfers, where B is the block...... size of any memory level in a multilevel memory hierarchy. Using bit manipulation techniques, the space can be further reduced to O(N). The structure can also be modified to support more general semigroup range sum queries in O(logB N) memory transfers, using O(Nlog2 N) space for three-sided queries...... and O(Nlog22 N/log2log2 N) space for four-sided queries. Based on the O(Nlog N) space range counting structure, we develop a data structure that uses O(Nlog2 N) space and answers three-sided range queries in O(logB N+T/B) memory transfers, where T is the number of reported points. Based...
Circular parameters of polynomials orthogonal on several arcs of the unit circle
International Nuclear Information System (INIS)
Lukashov, A L
2004-01-01
The asymptotic behaviour of the circular parameters (a n ) of the polynomials orthogonal on the unit circle with respect to Geronimus measures is analysed. It is shown that only when the harmonic measures of the arcs making up the support of the orthogonality measure are rational do the corresponding parameters form a pseudoperiodic sequence starting from some index (that is, after a suitable rotation of the circle and the corresponding modification of the orthogonality measures they form a periodic sequence). In addition it is demonstrated that if the harmonic measures of these arcs are linearly independent over the field of rational numbers, then the sets of limit points of the sequences of absolute values of the circular parameters |a n | and of their ratios (a n+k /a n ) n=1 ∞ are a closed interval on the real line and a continuum in the complex plane, respectively.
Some p-ranks related to orthogonal spaces
Blokhuis, A.; Moorhouse, G.E.
1995-01-01
We determine the p-rank of the incidence matrix of hyperplanes of PG(n, p e) and points of a nondegenerate quadric. This yields new bounds for ovoids and the size of caps in finite orthogonal spaces. In particular, we show the nonexistence of ovoids in O10+ (2e ),O10+ (3e ),O9 (5e ),O12+ (5e
Non-orthogonally transitive G2 spike solution
International Nuclear Information System (INIS)
Lim, Woei Chet
2015-01-01
We generalize the orthogonally transitive (OT) G 2 spike solution to the non-OT G 2 case. This is achieved by applying Geroch’s transformation on a Kasner seed. The new solution contains two more parameters than the OT G 2 spike solution. Unlike the OT G 2 spike solution, the new solution always resolves its spike. (fast track communication)
Memory-efficient dynamic programming backtrace and pairwise local sequence alignment.
Newberg, Lee A
2008-08-15
A backtrace through a dynamic programming algorithm's intermediate results in search of an optimal path, or to sample paths according to an implied probability distribution, or as the second stage of a forward-backward algorithm, is a task of fundamental importance in computational biology. When there is insufficient space to store all intermediate results in high-speed memory (e.g. cache) existing approaches store selected stages of the computation, and recompute missing values from these checkpoints on an as-needed basis. Here we present an optimal checkpointing strategy, and demonstrate its utility with pairwise local sequence alignment of sequences of length 10,000. Sample C++-code for optimal backtrace is available in the Supplementary Materials. Supplementary data is available at Bioinformatics online.
Benefits of Using Pairwise Trajectory Management in the Central East Pacific
Chartrand, Ryan; Ballard, Kathryn
2017-01-01
Pairwise Trajectory Management (PTM) is a concept that utilizes airborne and ground-based capabilities to enable airborne spacing operations in procedural airspace. This concept makes use of updated ground automation, Automatic Dependent Surveillance-Broadcast (ADS-B) and on board avionics generating real time guidance. An experiment was conducted to examine the potential benefits of implementing PTM in the Central East Pacific oceanic region. An explanation of the experiment and some of the results are included in this paper. The PTM concept allowed for an increase in the average time an aircraft is able to spend at its desired flight level and a reduction in fuel burn.
Bastien, Olivier; Ortet, Philippe; Roy, Sylvaine; Maréchal, Eric
2005-03-10
Popular methods to reconstruct molecular phylogenies are based on multiple sequence alignments, in which addition or removal of data may change the resulting tree topology. We have sought a representation of homologous proteins that would conserve the information of pair-wise sequence alignments, respect probabilistic properties of Z-scores (Monte Carlo methods applied to pair-wise comparisons) and be the basis for a novel method of consistent and stable phylogenetic reconstruction. We have built up a spatial representation of protein sequences using concepts from particle physics (configuration space) and respecting a frame of constraints deduced from pair-wise alignment score properties in information theory. The obtained configuration space of homologous proteins (CSHP) allows the representation of real and shuffled sequences, and thereupon an expression of the TULIP theorem for Z-score probabilities. Based on the CSHP, we propose a phylogeny reconstruction using Z-scores. Deduced trees, called TULIP trees, are consistent with multiple-alignment based trees. Furthermore, the TULIP tree reconstruction method provides a solution for some previously reported incongruent results, such as the apicomplexan enolase phylogeny. The CSHP is a unified model that conserves mutual information between proteins in the way physical models conserve energy. Applications include the reconstruction of evolutionary consistent and robust trees, the topology of which is based on a spatial representation that is not reordered after addition or removal of sequences. The CSHP and its assigned phylogenetic topology, provide a powerful and easily updated representation for massive pair-wise genome comparisons based on Z-score computations.
Directory of Open Access Journals (Sweden)
Maréchal Eric
2005-03-01
Full Text Available Abstract Background Popular methods to reconstruct molecular phylogenies are based on multiple sequence alignments, in which addition or removal of data may change the resulting tree topology. We have sought a representation of homologous proteins that would conserve the information of pair-wise sequence alignments, respect probabilistic properties of Z-scores (Monte Carlo methods applied to pair-wise comparisons and be the basis for a novel method of consistent and stable phylogenetic reconstruction. Results We have built up a spatial representation of protein sequences using concepts from particle physics (configuration space and respecting a frame of constraints deduced from pair-wise alignment score properties in information theory. The obtained configuration space of homologous proteins (CSHP allows the representation of real and shuffled sequences, and thereupon an expression of the TULIP theorem for Z-score probabilities. Based on the CSHP, we propose a phylogeny reconstruction using Z-scores. Deduced trees, called TULIP trees, are consistent with multiple-alignment based trees. Furthermore, the TULIP tree reconstruction method provides a solution for some previously reported incongruent results, such as the apicomplexan enolase phylogeny. Conclusion The CSHP is a unified model that conserves mutual information between proteins in the way physical models conserve energy. Applications include the reconstruction of evolutionary consistent and robust trees, the topology of which is based on a spatial representation that is not reordered after addition or removal of sequences. The CSHP and its assigned phylogenetic topology, provide a powerful and easily updated representation for massive pair-wise genome comparisons based on Z-score computations.
Cong, Lin-xiao; Huang, Min; Cai, Qi-sheng
2017-10-01
In this paper, a multi-line interferogram stitching method based on orthogonal shear using the Wollaston prism(WP) was proposed with a 2D projection interferogram recorded through the rotation of CCD, making the spectral resolution of Fourier-Transform spectrometer(FTS) of a limited spatial size increase by at least three times. The fringes on multi-lines were linked with the pixels of equal optical path difference (OPD). Ideally, the error of sampled phase within one pixel was less than half the wavelength, ensuring consecutive values in the over-sampled dimension while aliasing in another. In the simulation, with the calibration of 1.064μm, spectral lines at 1.31μm and 1.56μm of equal intensity were tested and observed. The result showed a bias of 0.13% at 1.31μm and 1.15% at 1.56μm in amplitude, and the FWHM at 1.31μm reduced from 25nm to 8nm after the sample points increased from 320 to 960. In the comparison of reflectance spectrum of carnauba wax within near infrared(NIR) band, the absorption peak at 1.2μm was more obvious and zoom of the band 1.38 1.43μm closer to the reference, although some fluctuation was in the short-wavelength region arousing the spectral crosstalk. In conclusion, with orthogonal shear based on the rotation of the CCD relative to the axis of WP, the spectral resolution of static FTS was enhanced by the projection of fringes to the grid coordinates and stitching the interferograms into a larger OPD, which showed the advantages of cost and miniaturization in the space-constrained NIR applications.
International Nuclear Information System (INIS)
Hardy, David J.; Schulten, Klaus; Wolff, Matthew A.; Skeel, Robert D.; Xia, Jianlin
2016-01-01
The multilevel summation method for calculating electrostatic interactions in molecular dynamics simulations constructs an approximation to a pairwise interaction kernel and its gradient, which can be evaluated at a cost that scales linearly with the number of atoms. The method smoothly splits the kernel into a sum of partial kernels of increasing range and decreasing variability with the longer-range parts interpolated from grids of increasing coarseness. Multilevel summation is especially appropriate in the context of dynamics and minimization, because it can produce continuous gradients. This article explores the use of B-splines to increase the accuracy of the multilevel summation method (for nonperiodic boundaries) without incurring additional computation other than a preprocessing step (whose cost also scales linearly). To obtain accurate results efficiently involves technical difficulties, which are overcome by a novel preprocessing algorithm. Numerical experiments demonstrate that the resulting method offers substantial improvements in accuracy and that its performance is competitive with an implementation of the fast multipole method in general and markedly better for Hamiltonian formulations of molecular dynamics. The improvement is great enough to establish multilevel summation as a serious contender for calculating pairwise interactions in molecular dynamics simulations. In particular, the method appears to be uniquely capable for molecular dynamics in two situations, nonperiodic boundary conditions and massively parallel computation, where the fast Fourier transform employed in the particle–mesh Ewald method falls short.
Zeros and logarithmic asymptotics of Sobolev orthogonal polynomials for exponential weights
Díaz Mendoza, C.; Orive, R.; Pijeira Cabrera, H.
2009-12-01
We obtain the (contracted) weak zero asymptotics for orthogonal polynomials with respect to Sobolev inner products with exponential weights in the real semiaxis, of the form , with [gamma]>0, which include as particular cases the counterparts of the so-called Freud (i.e., when [phi] has a polynomial growth at infinity) and Erdös (when [phi] grows faster than any polynomial at infinity) weights. In addition, the boundness of the distance of the zeros of these Sobolev orthogonal polynomials to the convex hull of the support and, as a consequence, a result on logarithmic asymptotics are derived.
Calibration of Smartphone-Based Weather Measurements Using Pairwise Gossip.
Zamora, Jane Louie Fresco; Kashihara, Shigeru; Yamaguchi, Suguru
2015-01-01
Accurate and reliable daily global weather reports are necessary for weather forecasting and climate analysis. However, the availability of these reports continues to decline due to the lack of economic support and policies in maintaining ground weather measurement systems from where these reports are obtained. Thus, to mitigate data scarcity, it is required to utilize weather information from existing sensors and built-in smartphone sensors. However, as smartphone usage often varies according to human activity, it is difficult to obtain accurate measurement data. In this paper, we present a heuristic-based pairwise gossip algorithm that will calibrate smartphone-based pressure sensors with respect to fixed weather stations as our referential ground truth. Based on actual measurements, we have verified that smartphone-based readings are unstable when observed during movement. Using our calibration algorithm on actual smartphone-based pressure readings, the updated values were significantly closer to the ground truth values.
Interactive 3D segmentation using connected orthogonal contours
de Bruin, P. W.; Dercksen, V. J.; Post, F. H.; Vossepoel, A. M.; Streekstra, G. J.; Vos, F. M.
2005-01-01
This paper describes a new method for interactive segmentation that is based on cross-sectional design and 3D modelling. The method represents a 3D model by a set of connected contours that are planar and orthogonal. Planar contours overlayed on image data are easily manipulated and linked contours
Zeng, Zhaoli; Qu, Xueming; Tan, Yidong; Tan, Runtao; Zhang, Shulian
2015-06-29
A simple and high-accuracy self-mixing interferometer based on single high-order orthogonally polarized feedback effects is presented. The single high-order feedback effect is realized when dual-frequency laser reflects numerous times in a Fabry-Perot cavity and then goes back to the laser resonator along the same route. In this case, two orthogonally polarized feedback fringes with nanoscale resolution are obtained. This self-mixing interferometer has the advantages of higher sensitivity to weak signal than that of conventional interferometer. In addition, two orthogonally polarized fringes are useful for discriminating the moving direction of measured object. The experiment of measuring 2.5nm step is conducted, which shows a great potential in nanometrology.
A novel calibration method for non-orthogonal shaft laser theodolite measurement system
Energy Technology Data Exchange (ETDEWEB)
Wu, Bin, E-mail: wubin@tju.edu.cn, E-mail: xueting@tju.edu.cn; Yang, Fengting; Ding, Wen [State Key Laboratory of Precision Measuring Technology and Instruments, Tianjin University, Tianjin 300072 (China); Xue, Ting, E-mail: wubin@tju.edu.cn, E-mail: xueting@tju.edu.cn [College of Electrical Engineering and Automation, Tianjin Key Laboratory of Process Measurement and Control, Tianjin University, Tianjin 300072 (China)
2016-03-15
Non-orthogonal shaft laser theodolite (N-theodolite) is a new kind of large-scale metrological instrument made up by two rotary tables and one collimated laser. There are three axes for an N-theodolite. According to naming conventions in traditional theodolite, rotary axes of two rotary tables are called as horizontal axis and vertical axis, respectively, and the collimated laser beam is named as sight axis. And the difference between N-theodolite and traditional theodolite is obvious, since the former one with no orthogonal and intersecting accuracy requirements. So the calibration method for traditional theodolite is no longer suitable for N-theodolite, while the calibration method applied currently is really complicated. Thus this paper introduces a novel calibration method for non-orthogonal shaft laser theodolite measurement system to simplify the procedure and to improve the calibration accuracy. A simple two-step process, calibration for intrinsic parameters and for extrinsic parameters, is proposed by the novel method. And experiments have shown its efficiency and accuracy.
Systems of Differential Equations with Skew-Symmetric, Orthogonal Matrices
Glaister, P.
2008-01-01
The solution of a system of linear, inhomogeneous differential equations is discussed. The particular class considered is where the coefficient matrix is skew-symmetric and orthogonal, and where the forcing terms are sinusoidal. More general matrices are also considered.
Burgués, Javier; Marco, Santiago
2018-08-17
Metal oxide semiconductor (MOX) sensors are usually temperature-modulated and calibrated with multivariate models such as partial least squares (PLS) to increase the inherent low selectivity of this technology. The multivariate sensor response patterns exhibit heteroscedastic and correlated noise, which suggests that maximum likelihood methods should outperform PLS. One contribution of this paper is the comparison between PLS and maximum likelihood principal components regression (MLPCR) in MOX sensors. PLS is often criticized by the lack of interpretability when the model complexity increases beyond the chemical rank of the problem. This happens in MOX sensors due to cross-sensitivities to interferences, such as temperature or humidity and non-linearity. Additionally, the estimation of fundamental figures of merit, such as the limit of detection (LOD), is still not standardized in multivariate models. Orthogonalization methods, such as orthogonal projection to latent structures (O-PLS), have been successfully applied in other fields to reduce the complexity of PLS models. In this work, we propose a LOD estimation method based on applying the well-accepted univariate LOD formulas to the scores of the first component of an orthogonal PLS model. The resulting LOD is compared to the multivariate LOD range derived from error-propagation. The methodology is applied to data extracted from temperature-modulated MOX sensors (FIS SB-500-12 and Figaro TGS 3870-A04), aiming at the detection of low concentrations of carbon monoxide in the presence of uncontrolled humidity (chemical noise). We found that PLS models were simpler and more accurate than MLPCR models. Average LOD values of 0.79 ppm (FIS) and 1.06 ppm (Figaro) were found using the approach described in this paper. These values were contained within the LOD ranges obtained with the error-propagation approach. The mean LOD increased to 1.13 ppm (FIS) and 1.59 ppm (Figaro) when considering validation samples
Kozma, Eszter; Demeter, Orsolya; Kele, Péter
2017-03-16
Bio-orthogonal labelling schemes based on inverse-electron-demand Diels-Alder (IEDDA) cycloaddition have attracted much attention in chemical biology recently. The appealing features of this reaction, such as the fast reaction kinetics, fully bio-orthogonal nature and high selectivity, have helped chemical biologists gain deeper understanding of biochemical processes at the molecular level. Listing the components and discussing the possibilities and limitations of these reagents, we provide a recent snapshot of the field of IEDDA-based biomolecular manipulation with special focus on fluorescent modulation approaches through the use of bio-orthogonalized building blocks. At the end, we discuss challenges that need to be addressed for further developments in order to overcome recent limitations and to enable researchers to answer biomolecular questions in more detail. © 2017 The Authors. Published by Wiley-VCH Verlag GmbH & Co. KGaA.
Bi-orthogonality conditions for power flow analysis in fluid-loaded elastic cylindrical shells
DEFF Research Database (Denmark)
Ledet, Lasse; Sorokin, Sergey V.; Larsen, Jan Balle
2015-01-01
The paper addresses the classical problem of time-harmonic forced vibrations of a fluid-loaded cylindrical shell considered as a multi-modal waveguide carrying infinitely many waves. Firstly, a modal method for formulation of Green’s matrix is derived by means of modal decomposition. The method...... builds on the recent advances on bi-orthogonality conditions for multi-modal waveguides, which are derived here for an elastic fluid-filled cylindrical shell. Subsequently, modal decomposition is applied to the bi-orthogonality conditions to formulate explicit algebraic equations to express the modal...... vibro-acoustic waveguide is subjected to separate pressure and velocity acoustical excitations. Further, it has been found and justified that the bi-orthogonality conditions can be used as a ’root finder’ to solve the dispersion equation. Finally, it is discussed how to predict the response of a fluid...
A square-plate ultrasonic linear motor operating in two orthogonal first bending modes.
Chen, Zhijiang; Li, Xiaotian; Chen, Jianguo; Dong, Shuxiang
2013-01-01
A novel square-plate piezoelectric ultrasonic linear motor operated in two orthogonal first bending vibration modes (B₁) is proposed. The piezoelectric vibrator of the linear motor is simply made of a single PZT ceramic plate (sizes: 15 x 15 x 2 mm) and poled in its thickness direction. The top surface electrode of the square ceramic plate was divided into four active areas along its two diagonal lines for exciting two orthogonal B₁ modes. The achieved driving force and speed from the linear motor are 1.8 N and 230 mm/s, respectively, under one pair orthogonal voltage drive of 150 V(p-p) at the resonance frequency of 92 kHz. The proposed linear motor has advantages over conventional ultrasonic linear motors, such as relatively larger driving force, very simple working mode and structure, and low fabrication cost.
Statistical pairwise interaction model of stock market
Bury, Thomas
2013-03-01
Financial markets are a classical example of complex systems as they are compound by many interacting stocks. As such, we can obtain a surprisingly good description of their structure by making the rough simplification of binary daily returns. Spin glass models have been applied and gave some valuable results but at the price of restrictive assumptions on the market dynamics or they are agent-based models with rules designed in order to recover some empirical behaviors. Here we show that the pairwise model is actually a statistically consistent model with the observed first and second moments of the stocks orientation without making such restrictive assumptions. This is done with an approach only based on empirical data of price returns. Our data analysis of six major indices suggests that the actual interaction structure may be thought as an Ising model on a complex network with interaction strengths scaling as the inverse of the system size. This has potentially important implications since many properties of such a model are already known and some techniques of the spin glass theory can be straightforwardly applied. Typical behaviors, as multiple equilibria or metastable states, different characteristic time scales, spatial patterns, order-disorder, could find an explanation in this picture.
High-Speed Turbo-TCM-Coded Orthogonal Frequency-Division Multiplexing Ultra-Wideband Systems
Directory of Open Access Journals (Sweden)
Wang Yanxia
2006-01-01
Full Text Available One of the UWB proposals in the IEEE P802.15 WPAN project is to use a multiband orthogonal frequency-division multiplexing (OFDM system and punctured convolutional codes for UWB channels supporting a data rate up to 480 Mbps. In this paper, we improve the proposed system using turbo TCM with QAM constellation for higher data rate transmission. We construct a punctured parity-concatenated trellis codes, in which a TCM code is used as the inner code and a simple parity-check code is employed as the outer code. The result shows that the system can offer a much higher spectral efficiency, for example, 1.2 Gbps, which is 2.5 times higher than the proposed system. We identify several essential requirements to achieve the high rate transmission, for example, frequency and time diversity and multilevel error protection. Results are confirmed by density evolution.
Orthogonal designs Hadamard matrices, quadratic forms and algebras
Seberry, Jennifer
2017-01-01
Orthogonal designs have proved fundamental to constructing code division multiple antenna systems for more efficient mobile communications. Starting with basic theory, this book develops the algebra and combinatorics to create new communications modes. Intended primarily for researchers, it is also useful for graduate students wanting to understand some of the current communications coding theories.
Modal analysis of fluid flows using variants of proper orthogonal decomposition
Rowley, Clarence; Dawson, Scott
2017-11-01
This talk gives an overview of several methods for analyzing fluid flows, based on variants of proper orthogonal decomposition. These methods may be used to determine simplified, approximate models that capture the essential features of these flows, in order to better understand the dominant physical mechanisms, and potentially to develop appropriate strategies for model-based flow control. We discuss balanced proper orthogonal decomposition as an approximation of balanced truncation, and explain connections with system identification methods such as the eigensystem realization algorithm. We demonstrate the methods on several canonical examples, including a linearized channel flow and the flow past a circular cylinder. Supported by AFOSR, Grant FA9550-14-1-0289.
Directory of Open Access Journals (Sweden)
Wingender Edgar
2008-05-01
Full Text Available Abstract Background Currently, there is a gap between purely theoretical studies of the topology of large bioregulatory networks and the practical traditions and interests of experimentalists. While the theoretical approaches emphasize the global characterization of regulatory systems, the practical approaches focus on the role of distinct molecules and genes in regulation. To bridge the gap between these opposite approaches, one needs to combine 'general' with 'particular' properties and translate abstract topological features of large systems into testable functional characteristics of individual components. Here, we propose a new topological parameter – the pairwise disconnectivity index of a network's element – that is capable of such bridging. Results The pairwise disconnectivity index quantifies how crucial an individual element is for sustaining the communication ability between connected pairs of vertices in a network that is displayed as a directed graph. Such an element might be a vertex (i.e., molecules, genes, an edge (i.e., reactions, interactions, as well as a group of vertices and/or edges. The index can be viewed as a measure of topological redundancy of regulatory paths which connect different parts of a given network and as a measure of sensitivity (robustness of this network to the presence (absence of each individual element. Accordingly, we introduce the notion of a path-degree of a vertex in terms of its corresponding incoming, outgoing and mediated paths, respectively. The pairwise disconnectivity index has been applied to the analysis of several regulatory networks from various organisms. The importance of an individual vertex or edge for the coherence of the network is determined by the particular position of the given element in the whole network. Conclusion Our approach enables to evaluate the effect of removing each element (i.e., vertex, edge, or their combinations from a network. The greatest potential value of
Calibration of Smartphone-Based Weather Measurements Using Pairwise Gossip
Directory of Open Access Journals (Sweden)
Jane Louie Fresco Zamora
2015-01-01
Full Text Available Accurate and reliable daily global weather reports are necessary for weather forecasting and climate analysis. However, the availability of these reports continues to decline due to the lack of economic support and policies in maintaining ground weather measurement systems from where these reports are obtained. Thus, to mitigate data scarcity, it is required to utilize weather information from existing sensors and built-in smartphone sensors. However, as smartphone usage often varies according to human activity, it is difficult to obtain accurate measurement data. In this paper, we present a heuristic-based pairwise gossip algorithm that will calibrate smartphone-based pressure sensors with respect to fixed weather stations as our referential ground truth. Based on actual measurements, we have verified that smartphone-based readings are unstable when observed during movement. Using our calibration algorithm on actual smartphone-based pressure readings, the updated values were significantly closer to the ground truth values.
Adaptive PID control based on orthogonal endocrine neural networks.
Milovanović, Miroslav B; Antić, Dragan S; Milojković, Marko T; Nikolić, Saša S; Perić, Staniša Lj; Spasić, Miodrag D
2016-12-01
A new intelligent hybrid structure used for online tuning of a PID controller is proposed in this paper. The structure is based on two adaptive neural networks, both with built-in Chebyshev orthogonal polynomials. First substructure network is a regular orthogonal neural network with implemented artificial endocrine factor (OENN), in the form of environmental stimuli, to its weights. It is used for approximation of control signals and for processing system deviation/disturbance signals which are introduced in the form of environmental stimuli. The output values of OENN are used to calculate artificial environmental stimuli (AES), which represent required adaptation measure of a second network-orthogonal endocrine adaptive neuro-fuzzy inference system (OEANFIS). OEANFIS is used to process control, output and error signals of a system and to generate adjustable values of proportional, derivative, and integral parameters, used for online tuning of a PID controller. The developed structure is experimentally tested on a laboratory model of the 3D crane system in terms of analysing tracking performances and deviation signals (error signals) of a payload. OENN-OEANFIS performances are compared with traditional PID and 6 intelligent PID type controllers. Tracking performance comparisons (in transient and steady-state period) showed that the proposed adaptive controller possesses performances within the range of other tested controllers. The main contribution of OENN-OEANFIS structure is significant minimization of deviation signals (17%-79%) compared to other controllers. It is recommended to exploit it when dealing with a highly nonlinear system which operates in the presence of undesirable disturbances. Copyright © 2016 Elsevier Ltd. All rights reserved.
International Nuclear Information System (INIS)
Shi Jinping; Chen Lixin; Xie Qiuying; Zhang Liwen; Teng Jianjian
2012-01-01
Objective: This study was to explore the feasibility of using the orthogonal plane dose formed by the coronal and sagittal plane to verify the volumetric modulated arc therapy (VMAT) plan. Methods: The VMAT plans of 12 patients were included in this study. The orthogonal plane dose formed by the coronal and sagittal plane were measured based on the combination of 2D ionization chamber array and multicube phantom, and the point dose were measured based on a multiple hole cylindrical phantom attached with two 0.125 cm 3 ionization chamber probes. Results: In the measurement of the point dose, the average error was 1.5% in high dose area (more than 80% of maximum), and 1.7% in low dose area (less than 80% of maximum), respectively. The discrepancy of point dose measurement was 1.3% between the 2D ionization chamber array and the VMAT planning system. In the measurement of the orthogonal plane dose, the pass rate of γ were 93.7% for 2%/2 mm and 97.2% for 3%/3 mm. Conclusion: It is reliable for using the orthogonal plane dose formed by the coronal and sagittal plane to verify the VMAT plan. (authors)
Criteria for the singularity of a pairwise l1-distance matrix and their generalizations
International Nuclear Information System (INIS)
D'yakonov, Alexander G
2012-01-01
We study the singularity problem for the pairwise distance matrix of a system of points, as well as generalizations of this problem that are connected with applications to interpolation theory and with an algebraic approach to recognition problems. We obtain necessary and sufficient conditions on a system under which the dimension of the range space of polynomials of bounded degree over the columns of the distance matrix is less than the number of points in the system.
Three-dimensional MRI-linac intra-fraction guidance using multiple orthogonal cine-MRI planes
DEFF Research Database (Denmark)
Bjerre, Troels; Crijns, Sjoerd; Rosenschöld, Per Munck af
2013-01-01
The introduction of integrated MRI-radiation therapy systems will offer live intra-fraction imaging. We propose a feasible low-latency multi-plane MRI-linac guidance strategy. In this work we demonstrate how interleaved acquired, orthogonal cine-MRI planes can be used for low-latency tracking...... of the 3D trajectory of a soft-tissue target structure. The proposed strategy relies on acquiring a pre-treatment 3D breath-hold scan, extracting a 3D target template and performing template matching between this 3D template and pairs of orthogonal 2D cine-MRI planes intersecting the target motion path....... For a 60 s free-breathing series of orthogonal cine-MRI planes, we demonstrate that the method was capable of accurately tracking the respiration related 3D motion of the left kidney. Quantitative evaluation of the method using a dataset designed for this purpose revealed a translational error of 1.15 mm...
The FOLDALIGN web server for pairwise structural RNA alignment and mutual motif search
DEFF Research Database (Denmark)
Havgaard, Jakob Hull; Lyngsø, Rune B.; Gorodkin, Jan
2005-01-01
FOLDALIGN is a Sankoff-based algorithm for making structural alignments of RNA sequences. Here, we present a web server for making pairwise alignments between two RNA sequences, using the recently updated version of FOLDALIGN. The server can be used to scan two sequences for a common structural RNA...... motif of limited size, or the entire sequences can be aligned locally or globally. The web server offers a graphical interface, which makes it simple to make alignments and manually browse the results. the web server can be accessed at http://foldalign.kvl.dk...
Magnitude conversion to unified moment magnitude using orthogonal regression relation
Das, Ranjit; Wason, H. R.; Sharma, M. L.
2012-05-01
Homogenization of earthquake catalog being a pre-requisite for seismic hazard assessment requires region based magnitude conversion relationships. Linear Standard Regression (SR) relations fail when both the magnitudes have measurement errors. To accomplish homogenization, techniques like Orthogonal Standard Regression (OSR) are thus used. In this paper a technique is proposed for using such OSR for preparation of homogenized earthquake catalog in moment magnitude Mw. For derivation of orthogonal regression relation between mb and Mw, a data set consisting of 171 events with observed body wave magnitudes (mb,obs) and moment magnitude (Mw,obs) values has been taken from ISC and GCMT databases for Northeast India and adjoining region for the period 1978-2006. Firstly, an OSR relation given below has been developed using mb,obs and Mw,obs values corresponding to 150 events from this data set. M=1.3(±0.004)m-1.4(±0.130), where mb,proxy are body wave magnitude values of the points on the OSR line given by the orthogonality criterion, for observed (mb,obs, Mw,obs) points. A linear relation is then developed between these 150 mb,obs values and corresponding mb,proxy values given by the OSR line using orthogonality criterion. The relation obtained is m=0.878(±0.03)m+0.653(±0.15). The accuracy of the above procedure has been checked with the rest of the data i.e., 21 events values. The improvement in the correlation coefficient value between mb,obs and Mw estimated using the proposed procedure compared to the correlation coefficient value between mb,obs and Mw,obs shows the advantage of OSR relationship for homogenization. The OSR procedure developed in this study can be used to homogenize any catalog containing various magnitudes (e.g., ML, mb, MS) with measurement errors, by their conversion to unified moment magnitude Mw. The proposed procedure also remains valid in case the magnitudes have measurement errors of different orders, i.e. the error variance ratio is
International Nuclear Information System (INIS)
Yahiaoui, S.-A.; Bentaiba, M.
2011-01-01
We present a method for obtaining the quasi-exact solutions of the Rabi Hamiltonian in the framework of the asymptotic iteration method (AIM). The energy eigenvalues, the eigenfunctions and the associated Bender-Dunne orthogonal polynomials are deduced. We show (i) that orthogonal polynomials are generated from the upper limit (i.e., truncation limit) of polynomial solutions deduced from AIM, and (ii) prove to have nonpositive norm. (authors)
Effect of pairwise additivity on finite-temperature behavior of classical ideal gas
Shekaari, Ashkan; Jafari, Mahmoud
2018-05-01
Finite-temperature molecular dynamics simulations have been applied to inquire into the effect of pairwise additivity on the behavior of classical ideal gas within the temperature range of T = 250-4000 K via applying a variety of pair potentials and then examining the temperature dependence of a number of thermodynamical properties. Examining the compressibility factor reveals the most deviation from ideal-gas behavior for the Lennard-Jones system mainly due to the presence of both the attractive and repulsive terms. The systems with either attractive or repulsive intermolecular potentials are found to present no resemblance to real gases, but the most similarity to the ideal one as temperature rises.
Orthogonal and symplectic Yangians and Yang–Baxter R-operators
International Nuclear Information System (INIS)
Isaev, A.P.; Karakhanyan, D.; Kirschner, R.
2016-01-01
Yang–Baxter R operators symmetric with respect to the orthogonal and symplectic algebras are considered in an uniform way. Explicit forms for the spinorial and metaplectic R operators are obtained. L operators, obeying the RLL relation with the orthogonal or symplectic fundamental R matrix, are considered in the interesting cases, where their expansion in inverse powers of the spectral parameter is truncated. Unlike the case of special linear algebra symmetry the truncation results in additional conditions on the Lie algebra generators of which the L operators is built and which can be fulfilled in distinguished representations only. Further, generalized L operators, obeying the modified RLL relation with the fundamental R matrix replaced by the spinorial or metaplectic one, are considered in the particular case of linear dependence on the spectral parameter. It is shown how by fusion with respect to the spinorial or metaplectic representation these first order spinorial L operators reproduce the ordinary L operators with second order truncation.
Tomographic Approach in Three-Orthogonal-Basis Quantum Key Distribution
International Nuclear Information System (INIS)
Liang Wen-Ye; Yin Zhen-Qiang; Chen Hua; Li Hong-Wei; Chen Wei; Han Zheng-Fu; Wen Hao
2015-01-01
At present, there is an increasing awareness of some three-orthogonal-basis quantum key distribution protocols, such as, the reference-frame-independent (RFI) protocol and the six-state protocol. For secure key rate estimations of these protocols, there are two methods: one is the conventional approach, and another is the tomographic approach. However, a comparison between these two methods has not been given yet. In this work, with the general model of rotation channel, we estimate the key rate using conventional and tomographic methods respectively. Results show that conventional estimation approach in RFI protocol is equivalent to tomographic approach only in the case of that one of three orthogonal bases is always aligned. In other cases, tomographic approach performs much better than the respective conventional approaches of the RFI protocol and the six-state protocol. Furthermore, based on the experimental data, we illustrate the deep connections between tomography and conventional RFI approach representations. (paper)
Orthogonal and symplectic Yangians and Yang–Baxter R-operators
Energy Technology Data Exchange (ETDEWEB)
Isaev, A.P., E-mail: isaevap@theor.jinr.ru [Bogoliubov Lab., Joint Institute of Nuclear Research, Dubna (Russian Federation); Karakhanyan, D., E-mail: karakhan@yerphi.am [Yerevan Physics Institute, 2 Alikhanyan br., 0036 Yerevan (Armenia); Kirschner, R., E-mail: Roland.Kirschner@itp.uni-leipzig.de [Institut für Theoretische Physik, Universität Leipzig, PF 100 920, D-04009 Leipzig (Germany)
2016-03-15
Yang–Baxter R operators symmetric with respect to the orthogonal and symplectic algebras are considered in an uniform way. Explicit forms for the spinorial and metaplectic R operators are obtained. L operators, obeying the RLL relation with the orthogonal or symplectic fundamental R matrix, are considered in the interesting cases, where their expansion in inverse powers of the spectral parameter is truncated. Unlike the case of special linear algebra symmetry the truncation results in additional conditions on the Lie algebra generators of which the L operators is built and which can be fulfilled in distinguished representations only. Further, generalized L operators, obeying the modified RLL relation with the fundamental R matrix replaced by the spinorial or metaplectic one, are considered in the particular case of linear dependence on the spectral parameter. It is shown how by fusion with respect to the spinorial or metaplectic representation these first order spinorial L operators reproduce the ordinary L operators with second order truncation.
Orthogonal and symplectic Yangians and Yang–Baxter R-operators
Directory of Open Access Journals (Sweden)
A.P. Isaev
2016-03-01
Full Text Available Yang–Baxter R operators symmetric with respect to the orthogonal and symplectic algebras are considered in an uniform way. Explicit forms for the spinorial and metaplectic R operators are obtained. L operators, obeying the RLL relation with the orthogonal or symplectic fundamental R matrix, are considered in the interesting cases, where their expansion in inverse powers of the spectral parameter is truncated. Unlike the case of special linear algebra symmetry the truncation results in additional conditions on the Lie algebra generators of which the L operators is built and which can be fulfilled in distinguished representations only. Further, generalized L operators, obeying the modified RLL relation with the fundamental R matrix replaced by the spinorial or metaplectic one, are considered in the particular case of linear dependence on the spectral parameter. It is shown how by fusion with respect to the spinorial or metaplectic representation these first order spinorial L operators reproduce the ordinary L operators with second order truncation.
Force Modelling in Orthogonal Cutting Considering Flank Wear Effect
Rathod, Kanti Bhikhubhai; Lalwani, Devdas I.
2017-05-01
In the present work, an attempt has been made to provide a predictive cutting force model during orthogonal cutting by combining two different force models, that is, a force model for a perfectly sharp tool plus considering the effect of edge radius and a force model for a worn tool. The first force model is for a perfectly sharp tool that is based on Oxley's predictive machining theory for orthogonal cutting as the Oxley's model is for perfectly sharp tool, the effect of cutting edge radius (hone radius) is added and improve model is presented. The second force model is based on worn tool (flank wear) that was proposed by Waldorf. Further, the developed combined force model is also used to predict flank wear width using inverse approach. The performance of the developed combined total force model is compared with the previously published results for AISI 1045 and AISI 4142 materials and found reasonably good agreement.
Least squares orthogonal polynomial approximation in several independent variables
International Nuclear Information System (INIS)
Caprari, R.S.
1992-06-01
This paper begins with an exposition of a systematic technique for generating orthonormal polynomials in two independent variables by application of the Gram-Schmidt orthogonalization procedure of linear algebra. It is then demonstrated how a linear least squares approximation for experimental data or an arbitrary function can be generated from these polynomials. The least squares coefficients are computed without recourse to matrix arithmetic, which ensures both numerical stability and simplicity of implementation as a self contained numerical algorithm. The Gram-Schmidt procedure is then utilised to generate a complete set of orthogonal polynomials of fourth degree. A theory for the transformation of the polynomial representation from an arbitrary basis into the familiar sum of products form is presented, together with a specific implementation for fourth degree polynomials. Finally, the computational integrity of this algorithm is verified by reconstructing arbitrary fourth degree polynomials from their values at randomly chosen points in their domain. 13 refs., 1 tab
USC orthogonal multiprocessor for image processing with neural networks
Hwang, Kai; Panda, Dhabaleswar K.; Haddadi, Navid
1990-07-01
This paper presents the architectural features and imaging applications of the Orthogonal MultiProcessor (OMP) system, which is under construction at the University of Southern California with research funding from NSF and assistance from several industrial partners. The prototype OMP is being built with 16 Intel i860 RISC microprocessors and 256 parallel memory modules using custom-designed spanning buses, which are 2-D interleaved and orthogonally accessed without conflicts. The 16-processor OMP prototype is targeted to achieve 430 MIPS and 600 Mflops, which have been verified by simulation experiments based on the design parameters used. The prototype OMP machine will be initially applied for image processing, computer vision, and neural network simulation applications. We summarize important vision and imaging algorithms that can be restructured with neural network models. These algorithms can efficiently run on the OMP hardware with linear speedup. The ultimate goal is to develop a high-performance Visual Computer (Viscom) for integrated low- and high-level image processing and vision tasks.
Radar orthogonality and radar length in Finsler and metric spacetime geometry
Pfeifer, Christian
2014-09-01
The radar experiment connects the geometry of spacetime with an observers measurement of spatial length. We investigate the radar experiment on Finsler spacetimes which leads to a general definition of radar orthogonality and radar length. The directions radar orthogonal to an observer form the spatial equal time surface an observer experiences and the radar length is the physical length the observer associates to spatial objects. We demonstrate these concepts on a forth order polynomial Finsler spacetime geometry which may emerge from area metric or premetric linear electrodynamics or in quantum gravity phenomenology. In an explicit generalization of Minkowski spacetime geometry we derive the deviation from the Euclidean spatial length measure in an observers rest frame explicitly.
DEFF Research Database (Denmark)
Boetker, Johan P.; Koradia, Vishal; Rades, Thomas
2012-01-01
was subjected to quench cooling thereby creating an amorphous form of the drug from both starting materials. The milled and quench cooled samples were, together with the crystalline starting materials, analyzed with X-ray powder diffraction (XRPD), Raman spectroscopy and atomic pair-wise distribution function...... (PDF) analysis of the XRPD pattern. When compared to XRPD and Raman spectroscopy, the PDF analysis was superior in displaying the difference between the amorphous samples prepared by milling and quench cooling approaches of the two starting materials....
Sparse orthogonal population representation of spatial context in the retrosplenial cortex.
Mao, Dun; Kandler, Steffen; McNaughton, Bruce L; Bonin, Vincent
2017-08-15
Sparse orthogonal coding is a key feature of hippocampal neural activity, which is believed to increase episodic memory capacity and to assist in navigation. Some retrosplenial cortex (RSC) neurons convey distributed spatial and navigational signals, but place-field representations such as observed in the hippocampus have not been reported. Combining cellular Ca 2+ imaging in RSC of mice with a head-fixed locomotion assay, we identified a population of RSC neurons, located predominantly in superficial layers, whose ensemble activity closely resembles that of hippocampal CA1 place cells during the same task. Like CA1 place cells, these RSC neurons fire in sequences during movement, and show narrowly tuned firing fields that form a sparse, orthogonal code correlated with location. RSC 'place' cell activity is robust to environmental manipulations, showing partial remapping similar to that observed in CA1. This population code for spatial context may assist the RSC in its role in memory and/or navigation.Neurons in the retrosplenial cortex (RSC) encode spatial and navigational signals. Here the authors use calcium imaging to show that, similar to the hippocampus, RSC neurons also encode place cell-like activity in a sparse orthogonal representation, partially anchored to the allocentric cues on the linear track.
Jitter-Robust Orthogonal Hermite Pulses for Ultra-Wideband Impulse Radio Communications
Directory of Open Access Journals (Sweden)
Ryuji Kohno
2005-03-01
Full Text Available The design of a class of jitter-robust, Hermite polynomial-based, orthogonal pulses for ultra-wideband impulse radio (UWB-IR communications systems is presented. A unified and exact closed-form expression of the auto- and cross-correlation functions of Hermite pulses is provided. Under the assumption that jitter values are sufficiently smaller than pulse widths, this formula is used to decompose jitter-shifted pulses over an orthonormal basis of the Hermite space. For any given jitter probability density function (pdf, the decomposition yields an equivalent distribution of N-by-N matrices which simplifies the convolutional jitter channel model onto a multiplicative matrix model. The design of jitter-robust orthogonal pulses is then transformed into a generalized eigendecomposition problem whose solution is obtained with a Jacobi-like simultaneous diagonalization algorithm applied over a subset of samples of the channel matrix distribution. Examples of the waveforms obtained with the proposed design and their improved auto- and cross-correlation functions are given. Simulation results are presented, which demonstrate the superior performance of a pulse-shape modulated (PSM- UWB-IR system using the proposed pulses, over the same system using conventional orthogonal Hermite pulses, in jitter channels with additive white Gaussian noise (AWGN.
International Nuclear Information System (INIS)
Wolf, D.; Keblinski, P.; Phillpot, S.R.; Eggebrecht, J.
1999-01-01
Based on a recent result showing that the net Coulomb potential in condensed ionic systems is rather short ranged, an exact and physically transparent method permitting the evaluation of the Coulomb potential by direct summation over the r -1 Coulomb pair potential is presented. The key observation is that the problems encountered in determining the Coulomb energy by pairwise, spherically truncated r -1 summation are a direct consequence of the fact that the system summed over is practically never neutral. A simple method is developed that achieves charge neutralization wherever the r -1 pair potential is truncated. This enables the extraction of the Coulomb energy, forces, and stresses from a spherically truncated, usually charged environment in a manner that is independent of the grouping of the pair terms. The close connection of our approach with the Ewald method is demonstrated and exploited, providing an efficient method for the simulation of even highly disordered ionic systems by direct, pairwise r -1 summation with spherical truncation at rather short range, i.e., a method which fully exploits the short-ranged nature of the interactions in ionic systems. The method is validated by simulations of crystals, liquids, and interfacial systems, such as free surfaces and grain boundaries. copyright 1999 American Institute of Physics
M-Isomap: Orthogonal Constrained Marginal Isomap for Nonlinear Dimensionality Reduction.
Zhang, Zhao; Chow, Tommy W S; Zhao, Mingbo
2013-02-01
Isomap is a well-known nonlinear dimensionality reduction (DR) method, aiming at preserving geodesic distances of all similarity pairs for delivering highly nonlinear manifolds. Isomap is efficient in visualizing synthetic data sets, but it usually delivers unsatisfactory results in benchmark cases. This paper incorporates the pairwise constraints into Isomap and proposes a marginal Isomap (M-Isomap) for manifold learning. The pairwise Cannot-Link and Must-Link constraints are used to specify the types of neighborhoods. M-Isomap computes the shortest path distances over constrained neighborhood graphs and guides the nonlinear DR through separating the interclass neighbors. As a result, large margins between both interand intraclass clusters are delivered and enhanced compactness of intracluster points is achieved at the same time. The validity of M-Isomap is examined by extensive simulations over synthetic, University of California, Irvine, and benchmark real Olivetti Research Library, YALE, and CMU Pose, Illumination, and Expression databases. The data visualization and clustering power of M-Isomap are compared with those of six related DR methods. The visualization results show that M-Isomap is able to deliver more separate clusters. Clustering evaluations also demonstrate that M-Isomap delivers comparable or even better results than some state-of-the-art DR algorithms.
P A M Dirac meets M G Krein: matrix orthogonal polynomials and Dirac's equation
International Nuclear Information System (INIS)
Duran, Antonio J; Gruenbaum, F Alberto
2006-01-01
The solution of several instances of the Schroedinger equation (1926) is made possible by using the well-known orthogonal polynomials associated with the names of Hermite, Legendre and Laguerre. A relativistic alternative to this equation was proposed by Dirac (1928) involving differential operators with matrix coefficients. In 1949 Krein developed a theory of matrix-valued orthogonal polynomials without any reference to differential equations. In Duran A J (1997 Matrix inner product having a matrix symmetric second order differential operator Rocky Mt. J. Math. 27 585-600), one of us raised the question of determining instances of these matrix-valued polynomials going along with second order differential operators with matrix coefficients. In Duran A J and Gruenbaum F A (2004 Orthogonal matrix polynomials satisfying second order differential equations Int. Math. Res. Not. 10 461-84), we developed a method to produce such examples and observed that in certain cases there is a connection with the instance of Dirac's equation with a central potential. We observe that the case of the central Coulomb potential discussed in the physics literature in Darwin C G (1928 Proc. R. Soc. A 118 654), Nikiforov A F and Uvarov V B (1988 Special Functions of Mathematical Physics (Basle: Birkhauser) and Rose M E 1961 Relativistic Electron Theory (New York: Wiley)), and its solution, gives rise to a matrix weight function whose orthogonal polynomials solve a second order differential equation. To the best of our knowledge this is the first instance of a connection between the solution of the first order matrix equation of Dirac and the theory of matrix-valued orthogonal polynomials initiated by M G Krein
Computational performance of a projection and rescaling algorithm
Pena, Javier; Soheili, Negar
2018-01-01
This paper documents a computational implementation of a {\\em projection and rescaling algorithm} for finding most interior solutions to the pair of feasibility problems \\[ \\text{find} \\; x\\in L\\cap\\mathbb{R}^n_{+} \\;\\;\\;\\; \\text{ and } \\; \\;\\;\\;\\; \\text{find} \\; \\hat x\\in L^\\perp\\cap\\mathbb{R}^n_{+}, \\] where $L$ denotes a linear subspace in $\\mathbb{R}^n$ and $L^\\perp$ denotes its orthogonal complement. The projection and rescaling algorithm is a recently developed method that combines a {\\...
Ortega-Quijano, Noé; Fade, Julien; Roche, Muriel; Parnet, François; Alouini, Mehdi
2016-04-01
Polarimetric sensing by orthogonality breaking has been recently proposed as an alternative technique for performing direct and fast polarimetric measurements using a specific dual-frequency dual-polarization (DFDP) source. Based on the instantaneous Stokes-Mueller formalism to describe the high-frequency evolution of the DFDP beam intensity, we thoroughly analyze the interaction of such a beam with birefringent, dichroic and depolarizing samples. This allows us to confirm that orthogonality breaking is produced by the sample diattenuation, whereas this technique is immune to both birefringence and diagonal depolarization. We further analyze the robustness of this technique when polarimetric sensing is performed through a birefringent waveguide, and the optimal DFDP source configuration for fiber-based endoscopic measurements is subsequently identified. Finally, we consider a stochastic depolarization model based on an ensemble of random linear diattenuators, which makes it possible to understand the progressive vanishing of the detected orthogonality breaking signal as the spatial heterogeneity of the sample increases, thus confirming the insensitivity of this method to diagonal depolarization. The fact that the orthogonality breaking signal is exclusively due to the sample dichroism is an advantageous feature for the precise decoupled characterization of such an anisotropic parameter in samples showing several simultaneous effects.
Energy Technology Data Exchange (ETDEWEB)
Bond, Stephen D.
2014-01-01
The availability of efficient algorithms for long-range pairwise interactions is central to the success of numerous applications, ranging in scale from atomic-level modeling of materials to astrophysics. This report focuses on the implementation and analysis of the multilevel summation method for approximating long-range pairwise interactions. The computational cost of the multilevel summation method is proportional to the number of particles, N, which is an improvement over FFTbased methods whos cost is asymptotically proportional to N logN. In addition to approximating electrostatic forces, the multilevel summation method can be use to efficiently approximate convolutions with long-range kernels. As an application, we apply the multilevel summation method to a discretized integral equation formulation of the regularized generalized Poisson equation. Numerical results are presented using an implementation of the multilevel summation method in the LAMMPS software package. Preliminary results show that the computational cost of the method scales as expected, but there is still a need for further optimization.
Passos, Cláudia P; Cardoso, Susana M; Barros, António S; Silva, Carlos M; Coimbra, Manuel A
2010-02-28
Fourier transform infrared (FTIR) spectroscopy has being emphasised as a widespread technique in the quick assess of food components. In this work, procyanidins were extracted with methanol and acetone/water from the seeds of white and red grape varieties. A fractionation by graded methanol/chloroform precipitations allowed to obtain 26 samples that were characterised using thiolysis as pre-treatment followed by HPLC-UV and MS detection. The average degree of polymerisation (DPn) of the procyanidins in the samples ranged from 2 to 11 flavan-3-ol residues. FTIR spectroscopy within the wavenumbers region of 1800-700 cm(-1) allowed to build a partial least squares (PLS1) regression model with 8 latent variables (LVs) for the estimation of the DPn, giving a RMSECV of 11.7%, with a R(2) of 0.91 and a RMSEP of 2.58. The application of orthogonal projection to latent structures (O-PLS1) clarifies the interpretation of the regression model vectors. Moreover, the O-PLS procedure has removed 88% of non-correlated variations with the DPn, allowing to relate the increase of the absorbance peaks at 1203 and 1099 cm(-1) with the increase of the DPn due to the higher proportion of substitutions in the aromatic ring of the polymerised procyanidin molecules. Copyright 2009 Elsevier B.V. All rights reserved.
A General Approach for Orthogonal 4-Tap Integer Multiwavelet Transforms
Directory of Open Access Journals (Sweden)
Mingli Jing
2010-01-01
Full Text Available An algorithm for orthogonal 4-tap integer multiwavelet transforms is proposed. We compute the singular value decomposition (SVD of block recursive matrices of transform matrix, and then transform matrix can be rewritten in a product of two block diagonal matrices and a permutation matrix. Furthermore, we factorize the block matrix of block diagonal matrices into triangular elementary reversible matrices (TERMs, which map integers to integers by rounding arithmetic. The cost of factorizing block matrix into TERMs does not increase with the increase of the dimension of transform matrix, and the proposed algorithm is in-place calculation and without allocating auxiliary memory. Examples of integer multiwavelet transform using DGHM and CL are given, which verify that the proposed algorithm is an executable algorithm and outperforms the existing algorithm for orthogonal 4-tap integer multiwavelet transform.
Orthogonal bases of radial functions for charge density refinements
International Nuclear Information System (INIS)
Restori, R.
1990-01-01
Charge density determination from X-ray measurements necessitates the evaluation of the Fourier-Bessel transforms of the radial functions used to expand the charge density. Analytical expressions are given here for four sets of orthogonal functions which can substitute for the 'traditional exponential functions' set in least-squares refinements. (orig.)
Orthogonal Projector Kit (OPK) as a new teaching aids with ...
African Journals Online (AJOL)
... as a new teaching aids with innovation ICT in teaching and learning 21 st century. ... Mathematics education filled with abstract concepts, the use of teaching aids is ... This article aims to introduce and express the importance of Orthogonal ...
Agrawal, Piyush; Tkatchenko, Alexandre; Kronik, Leeor
2013-08-13
We propose a nonempirical, pair-wise or many-body dispersion-corrected, optimally tuned range-separated hybrid functional. This functional retains the advantages of the optimal-tuning approach in the prediction of the electronic structure. At the same time, it gains accuracy in the prediction of binding energies for dispersively bound systems, as demonstrated on the S22 and S66 benchmark sets of weakly bound dimers.
Integrated, Dual Orthogonal Antennas for Polarimetric Ground Penetrating Radar
Pauli, Mario; Wiesbeck, Werner
2015-04-01
Ground penetrating radar systems are mostly equipped with single polarized antennas, for example with single linear polarization or with circular polarization. The radiated waves are partly reflected at the ground surface and very often the penetrating waves are distorted in their polarization. The distortion depends on the ground homogeneity and the orientation of the antennas relative to the ground structure. The received signals from the reflecting objects may most times only be classified according to their coverage and intensity. This makes the recognition of the objects difficult or impossible. In airborne and spaceborne Remote Sensing the systems are meanwhile mostly equipped with front ends with dual orthogonal polarized antennas for a full polarimetric operation. The received signals, registered in 2x2 scattering matrices according to co- and cross polarization, are processed for the evaluation of all features of the targets. Ground penetrating radars could also profit from the scientific results of Remote Sensing. The classification of detected objects for their structure and orientation requires more information in the reflected signal than can be measured with a single polarization [1, 2]. In this paper dual linear, orthogonal polarized antennas with a common single, frequency independent phase center, are presented [3]. The relative bandwidth of these antennas can be 1:3, up to 1:4. The antenna is designed to work in the frequency range between 3 GHz and 11 GHz, but can be easily adapted to the GPR frequency range by scaling. The size of the antenna scaled for operation in typical GPR frequencies would approximately be 20 by 20 cm2. By the implementation in a dielectric carrier it could be reduced in size if required. The major problem for ultra wide band, dual polarized antennas is the frequency independent feed network, realizing the required phase shifts. For these antennas a network, which is frequency independent over a wide range, has been
Differential forms orthogonal to holomorphic functions or forms, and their properties
Aizenberg, L A
1983-01-01
The authors consider the problem of characterizing the exterior differential forms which are orthogonal to holomorphic functions (or forms) in a domain D\\subset {\\mathbf C}^n with respect to integration over the boundary, and some related questions. They give a detailed account of the derivation of the Bochner-Martinelli-Koppelman integral representation of exterior differential forms, which was obtained in 1967 and has already found many important applications. They study the properties of \\overline \\partial-closed forms of type (p, n - 1), 0\\leq p\\leq n - 1, which turn out to be the duals (with respect to the orthogonality mentioned above) to holomorphic functions (or forms) in several complex variables, and resemble holomorphic functions of one complex variable in their properties.
A new measurement method for electrode gain in an orthogonally symmetric beam position monitor
International Nuclear Information System (INIS)
Zou Junying; Wu Fangfang; Yang Yongliang; Sun Baogen; Zhou Zeran; Luo Qing; Lu Ping; Xu Hongliang
2014-01-01
The new beam position monitor (BPM) system of the injector at the upgrade project of the Hefei Light Source (HLS Ⅱ) has 19 stripline beam position monitors. Most consist of four orthogonally symmetric stripline electrodes. Differences in electronic gain and mismaching tolerance can cause changes in the beam response of the BPM electrodes. This variation will couple the two measured horizontal positions, resulting in measuring error. To alleviate this effect, a new technique to measure the relative response of the four electrodes has been developed. It is independent of the beam charge, and the related coefficient can be calculated theoretically. The effect of electrode coupling on this technique is analyzed. The calibration data is used to fit the gain for all 19 injector beam position monitors. The results show the standard deviation of the distribution of measured gains is about 5%. (authors)
The Role of Orthogonal Polynomials in Tailoring Spherical Distributions to Kurtosis Requirements
Directory of Open Access Journals (Sweden)
Luca Bagnato
2016-08-01
Full Text Available This paper carries out an investigation of the orthogonal-polynomial approach to reshaping symmetric distributions to fit in with data requirements so as to cover the multivariate case. With this objective in mind, reference is made to the class of spherical distributions, given that they provide a natural multivariate generalization of univariate even densities. After showing how to tailor a spherical distribution via orthogonal polynomials to better comply with kurtosis requirements, we provide operational conditions for the positiveness of the resulting multivariate Gram–Charlier-like expansion, together with its kurtosis range. Finally, the approach proposed here is applied to some selected spherical distributions.
Computing the Skewness of the Phylogenetic Mean Pairwise Distance in Linear Time
DEFF Research Database (Denmark)
Tsirogiannis, Constantinos; Sandel, Brody Steven
2014-01-01
The phylogenetic Mean Pairwise Distance (MPD) is one of the most popular measures for computing the phylogenetic distance between a given group of species. More specifically, for a phylogenetic tree and for a set of species R represented by a subset of the leaf nodes of , the MPD of R is equal...... to the average cost of all possible simple paths in that connect pairs of nodes in R. Among other phylogenetic measures, the MPD is used as a tool for deciding if the species of a given group R are closely related. To do this, it is important to compute not only the value of the MPD for this group but also...
Dual comb generation from a mode-locked fiber laser with orthogonally polarized interlaced pulses.
Akosman, Ahmet E; Sander, Michelle Y
2017-08-07
Ultra-high precision dual-comb spectroscopy traditionally requires two mode-locked, fully stabilized lasers with complex feedback electronics. We present a novel mode-locked operation regime in a thulium-holmium co-doped fiber laser, a frequency-halved state with orthogonally polarized interlaced pulses, for dual comb generation from a single source. In a linear fiber laser cavity, an ultrafast pulse train composed of co-generated, equal intensity and orthogonally polarized consecutive pulses at half of the fundamental repetition rate is demonstrated based on vector solitons. Upon optical interference of the orthogonally polarized pulse trains, two stable microwave RF beat combs are formed, effectively down-converting the optical properties into the microwave regime. These co-generated, dual polarization interlaced pulse trains, from one all-fiber laser configuration with common mode suppression, thus provide an attractive compact source for dual-comb spectroscopy, optical metrology and polarization entanglement measurements.
Ishwar Dhami; Jinyang. Deng
2012-01-01
Many previous studies have examined ecotourism primarily from the perspective of tourists while largely ignoring ecotourism destinations. This study used geographical information system (GIS) and pairwise comparison to identify forest-based ecotourism areas in Pocahontas County, West Virginia. The study adopted the criteria and scores developed by Boyd and Butler (1994...
Highly sensitive rotation sensing based on orthogonal fiber-optic structures
Yang, Yi; Wang, Zi-nan; Xu, Lian-yu; Wang, Cui-yun; Jia, Lei; Yu, Xiao-qi; Shao, Shan; Li, Zheng-bin
2011-08-01
In traditional fiber-optic gyroscopes (FOG), the polarization state of counter propagating waves is critically controlled, and only the mode polarized along one particular direction survives. This is important for a traditional single mode fiber gyroscope as the requirement of reciprocity. However, there are some fatal defects such as low accuracy and poor bias stability in traditional structures. In this paper, based on the idea of polarization multiplexing, a double-polarization structure is put forward and experimentally studied. In highly birefringent fibers or standard single mode fibers with induced anisotropy, two orthogonal polarization modes can be used at the same time. Therefore, in polarization maintaining fibers (PMF), each pair of counter propagating beams preserve reciprocity within their own polarization state. Two series of sensing results are gotten in the fast and slow axes in PMF. The two sensing results have their own systematic drifts and the correlation of random noise in them is approximately zero. So, beams in fast and slow axes work as two independent and orthogonal gyroscopes. In this way, amount of information is doubled, providing opportunity to eliminate noise and improve sensitivity. Theoretically, this double-polarization structure can achieve a sensitivity of 10-18 deg/h. Computer simulation demonstrates that random noise and systematic drifts are largely reduced in this novel structure. In experiment, a forty-hour stability test targeting the earth's rotation velocity is carried out. Experiment result shows that the orthogonal fiber-optic structure has two big advantages compared with traditional ones. Firstly, the structure gets true value without any bias correction in any axis and even time-varying bias does not affect the acquisition of true value. The unbiasedness makes the structure very attractive when sudden disturbances or temperature drifts existing in working environment. Secondly, the structure lowers bias for more than
Carreno, Victor A.
2015-01-01
Pair-wise Trajectory Management (PTM) is a cockpit based delegated responsibility separation standard. When an air traffic service provider gives a PTM clearance to an aircraft and the flight crew accepts the clearance, the flight crew will maintain spacing and separation from a designated aircraft. A PTM along track algorithm will receive state information from the designated aircraft and from the own ship to produce speed guidance for the flight crew to maintain spacing and separation
Criteria for the singularity of a pairwise l{sub 1}-distance matrix and their generalizations
Energy Technology Data Exchange (ETDEWEB)
D' yakonov, Alexander G [M. V. Lomonosov Moscow State University, Faculty of Computational Mathematics and Cybernetics, Moscow (Russian Federation)
2012-06-30
We study the singularity problem for the pairwise distance matrix of a system of points, as well as generalizations of this problem that are connected with applications to interpolation theory and with an algebraic approach to recognition problems. We obtain necessary and sufficient conditions on a system under which the dimension of the range space of polynomials of bounded degree over the columns of the distance matrix is less than the number of points in the system.
Dynamic imaging of skeletal muscle contraction in three orthogonal directions
Lopata, R.G.; van Dijk, J.P; Pillen, S.; Nillisen, M.M.; Maas, H.; Thijssen, J.M.; Stegeman, D.F.; Korte, C.L.
2010-01-01
In this study, a multidimensional strain estimation method using biplane ultrasound is presented to assess local relative deformation (i.e., local strain) in three orthogonal directions in skeletal muscles during induced and voluntary contractions. The method was tested in the musculus biceps
Dynamic imaging of skeletal muscle contraction in three orthogonal directions.
Lopata, R.G.P.; Dijk, J.P. van; Pillen, S.; Nillesen, M.M.; Maas, H.; Thijssen, J.M.; Stegeman, D.F.; Korte, C.L. de
2010-01-01
In this study, a multidimensional strain estimation method using biplane ultrasound is presented to assess local relative deformation (i.e., local strain) in three orthogonal directions in skeletal muscles during induced and voluntary contractions. The method was tested in the musculus biceps
Gerrard, Simon R.
2012-10-23
Thermodynamic instability is a problem when assembling and purifying complex DNA nanostructures formed by hybridization alone. To address this issue, we have used photochemical fixation and orthogonal copper-free, ring-strain-promoted, click chemistry for the synthesis of dimeric, trimeric, and oligomeric modular DNA scaffolds from cyclic, double-stranded, 80-mer DNA nanoconstructs. This particular combination of orthogonal click reactions was more effective for nanoassembly than others explored. The complex nanostructures are stable to heat and denaturation agents and can therefore be purified and characterized. They are addressable in a sequence-specific manner by triplex formation, and they can be reversibly and selectively deconstructed. Nanostructures utilizing this orthogonal, chemical fixation methodology can be used as building blocks for nanomachines and functional DNA nanoarchitectures. © 2012 American Chemical Society.
Properties of the Magnitude Terms of Orthogonal Scaling Functions.
Tay, Peter C; Havlicek, Joseph P; Acton, Scott T; Hossack, John A
2010-09-01
The spectrum of the convolution of two continuous functions can be determined as the continuous Fourier transform of the cross-correlation function. The same can be said about the spectrum of the convolution of two infinite discrete sequences, which can be determined as the discrete time Fourier transform of the cross-correlation function of the two sequences. In current digital signal processing, the spectrum of the contiuous Fourier transform and the discrete time Fourier transform are approximately determined by numerical integration or by densely taking the discrete Fourier transform. It has been shown that all three transforms share many analogous properties. In this paper we will show another useful property of determining the spectrum terms of the convolution of two finite length sequences by determining the discrete Fourier transform of the modified cross-correlation function. In addition, two properties of the magnitude terms of orthogonal wavelet scaling functions are developed. These properties are used as constraints for an exhaustive search to determine an robust lower bound on conjoint localization of orthogonal scaling functions.
Bifurcations in two-image photometric stereo for orthogonal illuminations
Kozera, R.; Prokopenya, A.; Noakes, L.; Śluzek, A.
2017-07-01
This paper discusses the ambiguous shape recovery in two-image photometric stereo for a Lambertian surface. The current uniqueness analysis refers to linearly independent light-source directions p = (0, 0, -1) and q arbitrary. For this case necessary and sufficient condition determining ambiguous reconstruction is governed by a second-order linear partial differential equation with constant coefficients. In contrast, a general position of both non-colinear illumination directions p and q leads to a highly non-linear PDE which raises a number of technical difficulties. As recently shown, the latter can also be handled for another family of orthogonal illuminations parallel to the OXZ-plane. For the special case of p = (0, 0, -1) a potential ambiguity stems also from the possible bifurcations of sub-local solutions glued together along a curve defined by an algebraic equation in terms of the data. This paper discusses the occurrence of similar bifurcations for such configurations of orthogonal light-source directions. The discussion to follow is supplemented with examples based on continuous reflectance map model and generated synthetic images.
State orthogonality, boson bunching parameter and bosonic enhancement factor
Marchewka, Avi; Granot, Er'el
2016-04-01
It is emphasized that the bunching parameter β ≡ p B / p D , i.e. the ratio between the probability to measure two bosons and two distinguishable particles at the same state, is a constant of motion and depends only on the overlap between the initial wavefunctions. This ratio is equal to β = 2 / (1 + I 2), where I is the overlap integral between the initial wavefunctions. That is, only when the initial wavefunctions are orthogonal this ratio is equal to 2, however, this bunching ratio can be reduced to 1, when the two wavefunctions are identical. This simple equation explains the experimental evidences of a beam splitter. A straightforward conclusion is that by measuring the local bunching parameter β (at any point in space and time) it is possible to evaluate a global parameter I (the overlap between the initial wavefunctions). The bunching parameter is then generalized to arbitrary number of particles, and in an analogy to the two-particles scenario, the well-known bosonic enhancement appears only when all states are orthogonal.
Self-orthogonal codes from some bush-type Hadamard matrices ...
African Journals Online (AJOL)
By means of a construction method outlined by Harada and Tonchev, we determine some non-binary self-orthogonal codes obtained from the row span of orbit matrices of Bush-type Hadamard matrices that admit a xed-point-free and xed-block-free automorphism of prime order. We show that the code [20; 15; 4]5 obtained ...
Parasail: SIMD C library for global, semi-global, and local pairwise sequence alignments.
Daily, Jeff
2016-02-10
Sequence alignment algorithms are a key component of many bioinformatics applications. Though various fast Smith-Waterman local sequence alignment implementations have been developed for x86 CPUs, most are embedded into larger database search tools. In addition, fast implementations of Needleman-Wunsch global sequence alignment and its semi-global variants are not as widespread. This article presents the first software library for local, global, and semi-global pairwise intra-sequence alignments and improves the performance of previous intra-sequence implementations. A faster intra-sequence local pairwise alignment implementation is described and benchmarked, including new global and semi-global variants. Using a 375 residue query sequence a speed of 136 billion cell updates per second (GCUPS) was achieved on a dual Intel Xeon E5-2670 24-core processor system, the highest reported for an implementation based on Farrar's 'striped' approach. Rognes's SWIPE optimal database search application is still generally the fastest available at 1.2 to at best 2.4 times faster than Parasail for sequences shorter than 500 amino acids. However, Parasail was faster for longer sequences. For global alignments, Parasail's prefix scan implementation is generally the fastest, faster even than Farrar's 'striped' approach, however the opal library is faster for single-threaded applications. The software library is designed for 64 bit Linux, OS X, or Windows on processors with SSE2, SSE41, or AVX2. Source code is available from https://github.com/jeffdaily/parasail under the Battelle BSD-style license. Applications that require optimal alignment scores could benefit from the improved performance. For the first time, SIMD global, semi-global, and local alignments are available in a stand-alone C library.
Identifying the Academic Rising Stars via Pairwise Citation Increment Ranking
Zhang, Chuxu
2017-08-02
Predicting the fast-rising young researchers (the Academic Rising Stars) in the future provides useful guidance to the research community, e.g., offering competitive candidates to university for young faculty hiring as they are expected to have success academic careers. In this work, given a set of young researchers who have published the first first-author paper recently, we solve the problem of how to effectively predict the top k% researchers who achieve the highest citation increment in Δt years. We explore a series of factors that can drive an author to be fast-rising and design a novel pairwise citation increment ranking (PCIR) method that leverages those factors to predict the academic rising stars. Experimental results on the large ArnetMiner dataset with over 1.7 million authors demonstrate the effectiveness of PCIR. Specifically, it outperforms all given benchmark methods, with over 8% average improvement. Further analysis demonstrates that temporal features are the best indicators for rising stars prediction, while venue features are less relevant.
Reduction of snapshots for MIMO radar detection by block/group orthogonal matching pursuit
Ali, Hussain El Hosiny
2014-10-01
Multiple-input multiple-output (MIMO) radar works on the principle of transmission of independent waveforms at each element of its antenna array and is widely used for surveillance purposes. In this work, we investigate MIMO radar target localization problem with compressive sensing. Specifically, we try to solve the problem of estimation of target location in MIMO radar by group and block sparsity algorithms. It will lead us to a reduced number of snapshots required and also we can achieve better radar resolution. We will use group orthogonal matching pursuit (GOMP) and block orthogonal matching pursuit (BOMP) for our problem. © 2014 IEEE.
Vempala, Santosh S
2005-01-01
Random projection is a simple geometric technique for reducing the dimensionality of a set of points in Euclidean space while preserving pairwise distances approximately. The technique plays a key role in several breakthrough developments in the field of algorithms. In other cases, it provides elegant alternative proofs. The book begins with an elementary description of the technique and its basic properties. Then it develops the method in the context of applications, which are divided into three groups. The first group consists of combinatorial optimization problems such as maxcut, graph coloring, minimum multicut, graph bandwidth and VLSI layout. Presented in this context is the theory of Euclidean embeddings of graphs. The next group is machine learning problems, specifically, learning intersections of halfspaces and learning large margin hypotheses. The projection method is further refined for the latter application. The last set consists of problems inspired by information retrieval, namely, nearest neig...
Raghupathy, Arun; Ghia, Karman; Ghia, Urmila
2008-11-01
Compact Thermal Models (CTM) to represent IC packages has been traditionally developed using the DELPHI-based (DEvelopment of Libraries of PHysical models for an Integrated design) methodology. The drawbacks of this method are presented, and an alternative method is proposed. A reduced-order model that provides the complete thermal information accurately with less computational resources can be effectively used in system level simulations. Proper Orthogonal Decomposition (POD), a statistical method, can be used to reduce the order of the degree of freedom or variables of the computations for such a problem. POD along with the Galerkin projection allows us to create reduced-order models that reproduce the characteristics of the system with a considerable reduction in computational resources while maintaining a high level of accuracy. The goal of this work is to show that this method can be applied to obtain a boundary condition independent reduced-order thermal model for complex components. The methodology is applied to the 1D transient heat equation.
Lv, C L; Liu, Q B; Cai, C Y; Huang, J; Zhou, G W; Wang, Y G
2015-01-01
In the transmission electron microscopy, a revised real space (RRS) method has been confirmed to be a more accurate dynamical electron diffraction simulation method for low-energy electron diffraction than the conventional multislice method (CMS). However, the RRS method can be only used to calculate the dynamical electron diffraction of orthogonal crystal system. In this work, the expression of the RRS method for non-orthogonal crystal system is derived. By taking Na2 Ti3 O7 and Si as examples, the correctness of the derived RRS formula for non-orthogonal crystal system is confirmed by testing the coincidence of numerical results of both sides of Schrödinger equation; moreover, the difference between the RRS method and the CMS for non-orthogonal crystal system is compared at the accelerating voltage range from 40 to 10 kV. Our results show that the CMS method is almost the same as the RRS method for the accelerating voltage above 40 kV. However, when the accelerating voltage is further lowered to 20 kV or below, the CMS method introduces significant errors, not only for the higher-order Laue zone diffractions, but also for zero-order Laue zone. These indicate that the RRS method for non-orthogonal crystal system is necessary to be used for more accurate dynamical simulation when the accelerating voltage is low. Furthermore, the reason for the increase of differences between those diffraction patterns calculated by the RRS method and the CMS method with the decrease of the accelerating voltage is discussed. © 2015 The Authors Journal of Microscopy © 2015 Royal Microscopical Society.
Blount, Benjamin A.; Weenink, Tim; Vasylechko, Serge; Ellis, Tom
2012-01-01
Yeast is an ideal organism for the development and application of synthetic biology, yet there remain relatively few well-characterised biological parts suitable for precise engineering of this chassis. In order to address this current need, we present here a strategy that takes a single biological part, a promoter, and re-engineers it to produce a fine-graded output range promoter library and new regulated promoters desirable for orthogonal synthetic biology applications. A highly constitutive Saccharomyces cerevisiae promoter, PFY1p, was identified by bioinformatic approaches, characterised in vivo and diversified at its core sequence to create a 36-member promoter library. TetR regulation was introduced into PFY1p to create a synthetic inducible promoter (iPFY1p) that functions in an inverter device. Orthogonal and scalable regulation of synthetic promoters was then demonstrated for the first time using customisable Transcription Activator-Like Effectors (TALEs) modified and designed to act as orthogonal repressors for specific PFY1-based promoters. The ability to diversify a promoter at its core sequences and then independently target Transcription Activator-Like Orthogonal Repressors (TALORs) to virtually any of these sequences shows great promise toward the design and construction of future synthetic gene networks that encode complex “multi-wire” logic functions. PMID:22442681
Blount, Benjamin A; Weenink, Tim; Vasylechko, Serge; Ellis, Tom
2012-01-01
Yeast is an ideal organism for the development and application of synthetic biology, yet there remain relatively few well-characterised biological parts suitable for precise engineering of this chassis. In order to address this current need, we present here a strategy that takes a single biological part, a promoter, and re-engineers it to produce a fine-graded output range promoter library and new regulated promoters desirable for orthogonal synthetic biology applications. A highly constitutive Saccharomyces cerevisiae promoter, PFY1p, was identified by bioinformatic approaches, characterised in vivo and diversified at its core sequence to create a 36-member promoter library. TetR regulation was introduced into PFY1p to create a synthetic inducible promoter (iPFY1p) that functions in an inverter device. Orthogonal and scalable regulation of synthetic promoters was then demonstrated for the first time using customisable Transcription Activator-Like Effectors (TALEs) modified and designed to act as orthogonal repressors for specific PFY1-based promoters. The ability to diversify a promoter at its core sequences and then independently target Transcription Activator-Like Orthogonal Repressors (TALORs) to virtually any of these sequences shows great promise toward the design and construction of future synthetic gene networks that encode complex "multi-wire" logic functions.
Orthogonal Cas9 proteins for RNA-guided gene regulation and editing
Church, George M.; Esvelt, Kevin; Mali, Prashant
2017-03-07
Methods of modulating expression of a target nucleic acid in a cell are provided including use of multiple orthogonal Cas9 proteins to simultaneously and independently regulate corresponding genes or simultaneously and independently edit corresponding genes.
Orthogonal Analysis Based Performance Optimization for Vertical Axis Wind Turbine
Directory of Open Access Journals (Sweden)
Lei Song
2016-01-01
Full Text Available Geometrical shape of a vertical axis wind turbine (VAWT is composed of multiple structural parameters. Since there are interactions among the structural parameters, traditional research approaches, which usually focus on one parameter at a time, cannot obtain performance of the wind turbine accurately. In order to exploit overall effect of a novel VAWT, we firstly use a single parameter optimization method to obtain optimal values of the structural parameters, respectively, by Computational Fluid Dynamics (CFD method; based on the results, we then use an orthogonal analysis method to investigate the influence of interactions of the structural parameters on performance of the wind turbine and to obtain optimization combination of the structural parameters considering the interactions. Results of analysis of variance indicate that interactions among the structural parameters have influence on performance of the wind turbine, and optimization results based on orthogonal analysis have higher wind energy utilization than that of traditional research approaches.
Han, Dongxue; Han, Jianlei; Huo, Shengwei; Qu, Zuoming; Jiao, Tifeng; Liu, Minghua; Duan, Pengfei
2018-05-29
The orthogonal- or co-assembly of achiral perylene bisimide (PBI) with chiral gelators can be regulated by solvents. While the coassembly leads to the formation of chiroptical nanofibers through chirality transfer, the orthogonal assemblies could not. Moreover, protonation on the coassembled nanofibers could light up the circularly polarized luminescence (CPL).
Inferring Pairwise Interactions from Biological Data Using Maximum-Entropy Probability Models.
Directory of Open Access Journals (Sweden)
Richard R Stein
2015-07-01
Full Text Available Maximum entropy-based inference methods have been successfully used to infer direct interactions from biological datasets such as gene expression data or sequence ensembles. Here, we review undirected pairwise maximum-entropy probability models in two categories of data types, those with continuous and categorical random variables. As a concrete example, we present recently developed inference methods from the field of protein contact prediction and show that a basic set of assumptions leads to similar solution strategies for inferring the model parameters in both variable types. These parameters reflect interactive couplings between observables, which can be used to predict global properties of the biological system. Such methods are applicable to the important problems of protein 3-D structure prediction and association of gene-gene networks, and they enable potential applications to the analysis of gene alteration patterns and to protein design.
Hou, Fujun
2016-01-01
This paper provides a description of how market competitiveness evaluations concerning mechanical equipment can be made in the context of multi-criteria decision environments. It is assumed that, when we are evaluating the market competitiveness, there are limited number of candidates with some required qualifications, and the alternatives will be pairwise compared on a ratio scale. The qualifications are depicted as criteria in hierarchical structure. A hierarchical decision model called PCbHDM was used in this study based on an analysis of its desirable traits. Illustration and comparison shows that the PCbHDM provides a convenient and effective tool for evaluating the market competitiveness of mechanical equipment. The researchers and practitioners might use findings of this paper in application of PCbHDM.
Chella, Federico; Pizzella, Vittorio; Zappasodi, Filippo; Nolte, Guido; Marzetti, Laura
2016-05-01
Brain cognitive functions arise through the coordinated activity of several brain regions, which actually form complex dynamical systems operating at multiple frequencies. These systems often consist of interacting subsystems, whose characterization is of importance for a complete understanding of the brain interaction processes. To address this issue, we present a technique, namely the bispectral pairwise interacting source analysis (biPISA), for analyzing systems of cross-frequency interacting brain sources when multichannel electroencephalographic (EEG) or magnetoencephalographic (MEG) data are available. Specifically, the biPISA makes it possible to identify one or many subsystems of cross-frequency interacting sources by decomposing the antisymmetric components of the cross-bispectra between EEG or MEG signals, based on the assumption that interactions are pairwise. Thanks to the properties of the antisymmetric components of the cross-bispectra, biPISA is also robust to spurious interactions arising from mixing artifacts, i.e., volume conduction or field spread, which always affect EEG or MEG functional connectivity estimates. This method is an extension of the pairwise interacting source analysis (PISA), which was originally introduced for investigating interactions at the same frequency, to the study of cross-frequency interactions. The effectiveness of this approach is demonstrated in simulations for up to three interacting source pairs and for real MEG recordings of spontaneous brain activity. Simulations show that the performances of biPISA in estimating the phase difference between the interacting sources are affected by the increasing level of noise rather than by the number of the interacting subsystems. The analysis of real MEG data reveals an interaction between two pairs of sources of central mu and beta rhythms, localizing in the proximity of the left and right central sulci.
Gabor's signal expansion based on a non-orthogonal sampling geometry
Bastiaans, M.J.; Caulfield, H. J.
2002-01-01
Gabor’s signal expansion and the Gabor transform are formulated on a nonorthogonal time-frequency lattice instead of on the traditional rectangular lattice. The reason for doing so is that a non-orthogonal sampling geometry might be better adapted to the form of the window functions (in the
Cospectral Graphs and Regular Orthogonal Matrices of Level 2
Abiad Monge, A.; Haemers, W.H.
2012-01-01
Abstract: For a graph Γ with adjacency matrix A, we consider a switching operation that takes Γ into a graph Γ' with adjacency matrix A', defined by A' = QtAQ, where Q is a regular orthogonal matrix of level 2 (that is, QtQ = I, Q1 = 1, 2Q is integral, and Q is not a permutation matrix). If such an
Cospectral graphs and regular orthogonal matrices of level 2
Abiad Monge, A.; Haemers, W.H.
2012-01-01
For a graph Γ with adjacency matrix A , we consider a switching operation that takes Γ into a graph Γ′ with adjacency matrix A′ , defined by A′ = Q⊤AQ , where Q is a regular orthogonal matrix of level 2 (that is, Q⊤Q=I , Q1 = 1, 2Q is integral, and Q is not a permutation matrix). If such an
Carrier-interleaved orthogonal multi-electrode multi-carrier resistivity-measurement tool
International Nuclear Information System (INIS)
Cai, Yu; Sha, Shuang
2016-01-01
This paper proposes a new carrier-interleaved orthogonal multi-electrode multi-carrier resistivity-measurement tool used in a cylindrical borehole environment during oil-based mud drilling processes. The new tool is an orthogonal frequency division multiplexing access-based contactless multi-measurand detection tool. The tool can measure formation resistivity in different azimuthal angles and elevational depths. It can measure many more measurands simultaneously in a specified bandwidth than the legacy frequency division multiplexing multi-measurand tool without a channel-select filter while avoiding inter-carrier interference. The paper also shows that formation resistivity is not sensitive to frequency in certain frequency bands. The average resistivity collected from N subcarriers can increase the measurement of the signal-to-noise ratio (SNR) by N times given no amplitude clipping in the current-injection electrode. If the clipping limit is taken into account, with the phase rotation of each single carrier, the amplitude peak-to-average ratio can be reduced by 3 times, and the SNR can achieve a 9/ N times gain over the single-carrier system. The carrier-interleaving technique is also introduced to counter the carrier frequency offset (CFO) effect, where the CFO will cause inter-pad interference. A qualitative analysis and simulations demonstrate that block-interleaving performs better than tone-interleaving when coping with a large CFO. The theoretical analysis also suggests that increasing the subcarrier number can increase the measurement speed or enhance elevational resolution without sacrificing receiver performance. The complex orthogonal multi-pad multi-carrier resistivity logging tool, in which all subcarriers are complex signals, can provide a larger available subcarrier pool than other types of transceivers. (paper)
A Low-Complexity Euclidean Orthogonal LDPC Architecture for Low Power Applications.
Revathy, M; Saravanan, R
2015-01-01
Low-density parity-check (LDPC) codes have been implemented in latest digital video broadcasting, broadband wireless access (WiMax), and fourth generation of wireless standards. In this paper, we have proposed a high efficient low-density parity-check code (LDPC) decoder architecture for low power applications. This study also considers the design and analysis of check node and variable node units and Euclidean orthogonal generator in LDPC decoder architecture. The Euclidean orthogonal generator is used to reduce the error rate of the proposed LDPC architecture, which can be incorporated between check and variable node architecture. This proposed decoder design is synthesized on Xilinx 9.2i platform and simulated using Modelsim, which is targeted to 45 nm devices. Synthesis report proves that the proposed architecture greatly reduces the power consumption and hardware utilizations on comparing with different conventional architectures.
A Low-Complexity Euclidean Orthogonal LDPC Architecture for Low Power Applications
Directory of Open Access Journals (Sweden)
M. Revathy
2015-01-01
Full Text Available Low-density parity-check (LDPC codes have been implemented in latest digital video broadcasting, broadband wireless access (WiMax, and fourth generation of wireless standards. In this paper, we have proposed a high efficient low-density parity-check code (LDPC decoder architecture for low power applications. This study also considers the design and analysis of check node and variable node units and Euclidean orthogonal generator in LDPC decoder architecture. The Euclidean orthogonal generator is used to reduce the error rate of the proposed LDPC architecture, which can be incorporated between check and variable node architecture. This proposed decoder design is synthesized on Xilinx 9.2i platform and simulated using Modelsim, which is targeted to 45 nm devices. Synthesis report proves that the proposed architecture greatly reduces the power consumption and hardware utilizations on comparing with different conventional architectures.
Algorithm of orthogonal bi-axle for auto-separating of watermelon seeds
Sun, Yong; Guan, Miao; Yu, Daoqin; Wang, Jing
2007-11-01
During the process of watermelon seeds characteristic extraction as well as separation, watermelon seeds' major and minor axes, the length and width ratio have played a very important role in appearance regulating degree evaluation. It is quite difficult to find the answer of orthogonal bi-axes because the watermelon seeds are flat and irregular in shape and what's more there is no rule to follow. After a lot of experiments and research, the author proposed the algorithm of orthogonal bi-axes algorithm for granulated object. It has been put into practice and proved in the application of auto-separation system for watermelon seeds. This algorithm has the advantage of lower time complexity and higher precision compared with other algorithms. The algorithm can be used in the solution of other similar granulated objects, and has the widespread application value.
Projected coupled cluster theory.
Qiu, Yiheng; Henderson, Thomas M; Zhao, Jinmo; Scuseria, Gustavo E
2017-08-14
Coupled cluster theory is the method of choice for weakly correlated systems. But in the strongly correlated regime, it faces a symmetry dilemma, where it either completely fails to describe the system or has to artificially break certain symmetries. On the other hand, projected Hartree-Fock theory captures the essential physics of many kinds of strong correlations via symmetry breaking and restoration. In this work, we combine and try to retain the merits of these two methods by applying symmetry projection to broken symmetry coupled cluster wave functions. The non-orthogonal nature of states resulting from the application of symmetry projection operators furnishes particle-hole excitations to all orders, thus creating an obstacle for the exact evaluation of overlaps. Here we provide a solution via a disentanglement framework theory that can be approximated rigorously and systematically. Results of projected coupled cluster theory are presented for molecules and the Hubbard model, showing that spin projection significantly improves unrestricted coupled cluster theory while restoring good quantum numbers. The energy of projected coupled cluster theory reduces to the unprojected one in the thermodynamic limit, albeit at a much slower rate than projected Hartree-Fock.
A new design and rationale for 3D orthogonally oversampled k-space trajectories.
Pipe, James G; Zwart, Nicholas R; Aboussouan, Eric A; Robison, Ryan K; Devaraj, Ajit; Johnson, Kenneth O
2011-11-01
A novel center-out 3D trajectory for sampling magnetic resonance data is presented. The trajectory set is based on a single Fermat spiral waveform, which is substantially undersampled in the center of k-space. Multiple trajectories are combined in a "stacked cone" configuration to give very uniform sampling throughout a "hub," which is very efficient in terms of gradient performance and uniform trajectory spacing. The fermat looped, orthogonally encoded trajectories (FLORET) design produces less gradient-efficient trajectories near the poles, so multiple orthogonal hub designs are shown. These multihub designs oversample k-space twice with orthogonal trajectories, which gives unique properties but also doubles the minimum scan time for critical sampling of k-space. The trajectory is shown to be much more efficient than the conventional stack of cones trajectory, and has nearly the same signal-to-noise ratio efficiency (but twice the minimum scan time) as a stack of spirals trajectory. As a center-out trajectory, it provides a shorter minimum echo time than stack of spirals, and its spherical k-space coverage can dramatically reduce Gibbs ringing. Copyright © 2011 Wiley Periodicals, Inc.
Orthogonal polynomials on $R^+$ and birth-death processes with killing
Coolen-Schrijner, Pauline; Coolen-Schrijner, Pauline; van Doorn, Erik A.; Elaydi, S.; Cushing, J.; Lasser, R.; Ruffing, A.; Papageorgiou, V.; Van Assche, W.
2007-01-01
The purpose of this paper is to extend some results of Karlin and McGregor's and Chihara's concerning the three-terms recurrence relation for polynomials orthogonal with respect to a measure on the nonnegative real axis. Our findings are relevant for the analysis of a type of Markov chains known as
Orthogonal frequency division multiple access fundamentals and applications
Jiang, Tao; Zhang, Yan
2010-01-01
Supported by the expert-level advice of pioneering researchers, Orthogonal Frequency Division Multiple Access Fundamentals and Applications provides a comprehensive and accessible introduction to the foundations and applications of one of the most promising access technologies for current and future wireless networks. It includes authoritative coverage of the history, fundamental principles, key techniques, and critical design issues of OFDM systems. Covering various techniques of effective resource management for OFDM/OFDMA-based wireless communication systems, this cutting-edge reference:Add
State orthogonality, boson bunching parameter and bosonic enhancement factor
International Nuclear Information System (INIS)
Marchewka, A.; Granot, E.
2016-01-01
Bosons bunching is the tendency of bosons to bunch together with respect to distinguishable particles. It is emphasized that the bunching parameter β = p_B/p_D, i.e. the ratio between the probability to measure 2 bosons and 2 distinguishable particles at the same state, is a constant of motion and depends only on the overlap between the initial wavefunctions. This ratio is equal to β = 2/(1 + l"2), where l is the overlap integral between the initial wavefunctions. That is, only when the initial wavefunctions are orthogonal this ratio is equal to 2, however, this bunching ratio can be reduced to 1, when the two wavefunctions are identical. This simple equation explains the experimental evidences of a beam splitter. A straightforward conclusion is that by measuring the local bunching parameter β (at any point in space and time) it is possible to evaluate a global parameter l (the overlap between the initial wavefunctions). The bunching parameter is then generalized to arbitrary number of particles, and in an analogy to the two-particles scenario, the well-known bosonic enhancement appears only when all states are orthogonal
VALUES-ORIENTED PROJECT MANAGEMENT OF RENEWABLE ENERGY
Directory of Open Access Journals (Sweden)
Олександр Михайлович ВОЗНИЙ
2017-03-01
Full Text Available The value-oriented approach to project management of renewable energy based on classification stage of the life cycle of products of the projects, adapted to the goals and objectives of information modeling, which allowed to formulate stricter requirements information models used at different stages of the power plant is proposed. A classification of the alternative energy projects, which highlighting areas for activities is proposed. The list of stakeholders that have an impact on alternative energy projects and presented their classification is defined. The value of alternative energy projects considered from the standpoint of a utilitarian approach, using the concept of utility and on the basis of this concept proposed classification values of alternative energy projects. Criteria values as indicators for assessing the value of alternative energy projects and their weights determined by pairwise comparison. To take into account the changes of the value criteria over time proposed to use the key control points value, assessed value criteria in various key points of control, defined indicator of the total value of alternative energy projects. The classification of risks and tools for value-oriented risk management in alternative energy projects is proposed. Further study authors plan to link the development of mechanisms for harmonization value alternative energy projects for their stakeholders.
A turbulent jet in crossflow analysed with proper orthogonal decomposition
DEFF Research Database (Denmark)
Meyer, Knud Erik; Pedersen, Jakob Martin; Özcan, Oktay
2007-01-01
and pipe diameter was 2400 and the jet to crossflow velocity ratios were R = 3.3 and R = 1.3. The experimental data have been analysed by proper orthogonal decomposition (POD). For R = 3.3, the results in several different planes indicate that the wake vortices are the dominant dynamic flow structures...
Schure, Mark R; Davis, Joe M
2017-11-10
Orthogonality metrics (OMs) for three and higher dimensional separations are proposed as extensions of previously developed OMs, which were used to evaluate the zone utilization of two-dimensional (2D) separations. These OMs include correlation coefficients, dimensionality, information theory metrics and convex-hull metrics. In a number of these cases, lower dimensional subspace metrics exist and can be readily calculated. The metrics are used to interpret previously generated experimental data. The experimental datasets are derived from Gilar's peptide data, now modified to be three dimensional (3D), and a comprehensive 3D chromatogram from Moore and Jorgenson. The Moore and Jorgenson chromatogram, which has 25 identifiable 3D volume elements or peaks, displayed good orthogonality values over all dimensions. However, OMs based on discretization of the 3D space changed substantially with changes in binning parameters. This example highlights the importance in higher dimensions of having an abundant number of retention times as data points, especially for methods that use discretization. The Gilar data, which in a previous study produced 21 2D datasets by the pairing of 7 one-dimensional separations, was reinterpreted to produce 35 3D datasets. These datasets show a number of interesting properties, one of which is that geometric and harmonic means of lower dimensional subspace (i.e., 2D) OMs correlate well with the higher dimensional (i.e., 3D) OMs. The space utilization of the Gilar 3D datasets was ranked using OMs, with the retention times of the datasets having the largest and smallest OMs presented as graphs. A discussion concerning the orthogonality of higher dimensional techniques is given with emphasis on molecular diversity in chromatographic separations. In the information theory work, an inconsistency is found in previous studies of orthogonality using the 2D metric often identified as %O. A new choice of metric is proposed, extended to higher dimensions
P A M Dirac meets M G Krein: matrix orthogonal polynomials and Dirac's equation
Energy Technology Data Exchange (ETDEWEB)
Duran, Antonio J [Departamento de Analisis Matematico, Universidad de Sevilla, Apdo (PO BOX) 1160, 41080 Sevilla (Spain); Gruenbaum, F Alberto [Department of Mathematics, University of California, Berkeley, CA 94720 (United States)
2006-04-07
The solution of several instances of the Schroedinger equation (1926) is made possible by using the well-known orthogonal polynomials associated with the names of Hermite, Legendre and Laguerre. A relativistic alternative to this equation was proposed by Dirac (1928) involving differential operators with matrix coefficients. In 1949 Krein developed a theory of matrix-valued orthogonal polynomials without any reference to differential equations. In Duran A J (1997 Matrix inner product having a matrix symmetric second order differential operator Rocky Mt. J. Math. 27 585-600), one of us raised the question of determining instances of these matrix-valued polynomials going along with second order differential operators with matrix coefficients. In Duran A J and Gruenbaum F A (2004 Orthogonal matrix polynomials satisfying second order differential equations Int. Math. Res. Not. 10 461-84), we developed a method to produce such examples and observed that in certain cases there is a connection with the instance of Dirac's equation with a central potential. We observe that the case of the central Coulomb potential discussed in the physics literature in Darwin C G (1928 Proc. R. Soc. A 118 654), Nikiforov A F and Uvarov V B (1988 Special Functions of Mathematical Physics (Basle: Birkhauser) and Rose M E 1961 Relativistic Electron Theory (New York: Wiley)), and its solution, gives rise to a matrix weight function whose orthogonal polynomials solve a second order differential equation. To the best of our knowledge this is the first instance of a connection between the solution of the first order matrix equation of Dirac and the theory of matrix-valued orthogonal polynomials initiated by M G Krein.
Bio-Orthogonal Mediated Nucleic Acid Transfection of Cells via Cell Surface Engineering.
O'Brien, Paul J; Elahipanah, Sina; Rogozhnikov, Dmitry; Yousaf, Muhammad N
2017-05-24
The efficient delivery of foreign nucleic acids (transfection) into cells is a critical tool for fundamental biomedical research and a pillar of several biotechnology industries. There are currently three main strategies for transfection including reagent, instrument, and viral based methods. Each technology has significantly advanced cell transfection; however, reagent based methods have captured the majority of the transfection market due to their relatively low cost and ease of use. This general method relies on the efficient packaging of a reagent with nucleic acids to form a stable complex that is subsequently associated and delivered to cells via nonspecific electrostatic targeting. Reagent transfection methods generally use various polyamine cationic type molecules to condense with negatively charged nucleic acids into a highly positively charged complex, which is subsequently delivered to negatively charged cells in culture for association, internalization, release, and expression. Although this appears to be a straightforward procedure, there are several major issues including toxicity, low efficiency, sorting of viable transfected from nontransfected cells, and limited scope of transfectable cell types. Herein, we report a new strategy (SnapFect) for nucleic acid transfection to cells that does not rely on electrostatic interactions but instead uses an integrated approach combining bio-orthogonal liposome fusion, click chemistry, and cell surface engineering. We show that a target cell population is rapidly and efficiently engineered to present a bio-orthogonal functional group on its cell surface through nanoparticle liposome delivery and fusion. A complementary bio-orthogonal nucleic acid complex is then formed and delivered to which chemoselective click chemistry induced transfection occurs to the primed cell. This new strategy requires minimal time, steps, and reagents and leads to superior transfection results for a broad range of cell types
Directory of Open Access Journals (Sweden)
Taneda Akito
2008-12-01
Full Text Available Abstract Background Aligning RNA sequences with low sequence identity has been a challenging problem since such a computation essentially needs an algorithm with high complexities for taking structural conservation into account. Although many sophisticated algorithms for the purpose have been proposed to date, further improvement in efficiency is necessary to accelerate its large-scale applications including non-coding RNA (ncRNA discovery. Results We developed a new genetic algorithm, Cofolga2, for simultaneously computing pairwise RNA sequence alignment and consensus folding, and benchmarked it using BRAliBase 2.1. The benchmark results showed that our new algorithm is accurate and efficient in both time and memory usage. Then, combining with the originally trained SVM, we applied the new algorithm to novel ncRNA discovery where we compared S. cerevisiae genome with six related genomes in a pairwise manner. By focusing our search to the relatively short regions (50 bp to 2,000 bp sandwiched by conserved sequences, we successfully predict 714 intergenic and 1,311 sense or antisense ncRNA candidates, which were found in the pairwise alignments with stable consensus secondary structure and low sequence identity (≤ 50%. By comparing with the previous predictions, we found that > 92% of the candidates is novel candidates. The estimated rate of false positives in the predicted candidates is 51%. Twenty-five percent of the intergenic candidates has supports for expression in cell, i.e. their genomic positions overlap those of the experimentally determined transcripts in literature. By manual inspection of the results, moreover, we obtained four multiple alignments with low sequence identity which reveal consensus structures shared by three species/sequences. Conclusion The present method gives an efficient tool complementary to sequence-alignment-based ncRNA finders.
Yang, Pan; Peng, Yulan; Zhao, Haina; Luo, Honghao; Jin, Ya; He, Yushuang
2015-01-01
Static shear wave elastography (SWE) is used to detect breast lesions, but slice and plane selections result in discrepancies. To evaluate the intraobserver reproducibility of continuous SWE, and whether quantitative elasticities in orthogonal planes perform better in the differential diagnosis of breast lesions. One hundred and twenty-two breast lesions scheduled for ultrasound-guided biopsy were recruited. Continuous SWE scans were conducted in orthogonal planes separately. Quantitative elasticities and histopathology results were collected. Reproducibility in the same plane and diagnostic performance in different planes were evaluated. The maximum and mean elasticities of the hardest portion, and standard deviation of whole lesion, had high inter-class correlation coefficients (0.87 to 0.95) and large areas under receiver operation characteristic curve (0.887 to 0.899). Without loss of accuracy, sensitivities had increased in orthogonal planes compared with single plane (from 73.17% up to 82.93% at most). Mean elasticity of whole lesion and lesion-to-parenchyma ratio were significantly less reproducible and less accurate. Continuous SWE is highly reproducible for the same observer. The maximum and mean elasticities of the hardest portion and standard deviation of whole lesion are most reliable. Furthermore, the sensitivities of the three parameters are improved in orthogonal planes without loss of accuracies.
Power system frequency estimation based on an orthogonal decomposition method
Lee, Chih-Hung; Tsai, Men-Shen
2018-06-01
In recent years, several frequency estimation techniques have been proposed by which to estimate the frequency variations in power systems. In order to properly identify power quality issues under asynchronously-sampled signals that are contaminated with noise, flicker, and harmonic and inter-harmonic components, a good frequency estimator that is able to estimate the frequency as well as the rate of frequency changes precisely is needed. However, accurately estimating the fundamental frequency becomes a very difficult task without a priori information about the sampling frequency. In this paper, a better frequency evaluation scheme for power systems is proposed. This method employs a reconstruction technique in combination with orthogonal filters, which may maintain the required frequency characteristics of the orthogonal filters and improve the overall efficiency of power system monitoring through two-stage sliding discrete Fourier transforms. The results showed that this method can accurately estimate the power system frequency under different conditions, including asynchronously sampled signals contaminated by noise, flicker, and harmonic and inter-harmonic components. The proposed approach also provides high computational efficiency.
Birth-death processes with killing : orthogonal polynomials and quasi-stationary distributions
Coolen-Schrijner, Pauline; van Doorn, Erik A.
2005-01-01
The Karlin-McGregor representation for the transition probabilities of a birth-death process with an absorbing bottom state involves a sequence of orthogonal polynomials and the corresponding measure. This representation can be generalized to a setting in which a transition to the absorbing state
A general boundary capability embedded in an orthogonal mesh
International Nuclear Information System (INIS)
Hewett, D.W.; Yu-Jiuan Chen
1995-01-01
The authors describe how they hold onto orthogonal mesh discretization when dealing with curved boundaries. Special difference operators were constructed to approximate numerical zones split by the domain boundary; the operators are particularly simple for this rectangular mesh. The authors demonstrated that this simple numerical approach, termed Dynamic Alternating Direction Implicit, turned out to be considerably more efficient than more complex grid-adaptive algorithms that were tried previously
Lu, Zhao; Sun, Jing; Butts, Kenneth
2016-02-03
A giant leap has been made in the past couple of decades with the introduction of kernel-based learning as a mainstay for designing effective nonlinear computational learning algorithms. In view of the geometric interpretation of conditional expectation and the ubiquity of multiscale characteristics in highly complex nonlinear dynamic systems [1]-[3], this paper presents a new orthogonal projection operator wavelet kernel, aiming at developing an efficient computational learning approach for nonlinear dynamical system identification. In the framework of multiresolution analysis, the proposed projection operator wavelet kernel can fulfill the multiscale, multidimensional learning to estimate complex dependencies. The special advantage of the projection operator wavelet kernel developed in this paper lies in the fact that it has a closed-form expression, which greatly facilitates its application in kernel learning. To the best of our knowledge, it is the first closed-form orthogonal projection wavelet kernel reported in the literature. It provides a link between grid-based wavelets and mesh-free kernel-based methods. Simulation studies for identifying the parallel models of two benchmark nonlinear dynamical systems confirm its superiority in model accuracy and sparsity.
van Doorn, Erik A.; van Foreest, N.D.; Zeifman, Alexander I.
2013-01-01
We correct representations for the endpoints of the true interval of orthogonality of a sequence of orthogonal polynomials that were stated by us in the Journal of Computational and Applied Mathematics 233 (2009) 847–851.
The role of local stress perturbation on the simultaneous opening of orthogonal fractures
Boersma, Quinten; Hardebol, Nico; Barnhoorn, Auke; Bertotti, Giovanni; Drury, Martyn
2016-04-01
Orthogonal fracture networks (ladder-like networks) are arrangements that are commonly observed in outcrop studies. They form a particularly dense and well connected network which can play an important role in the effective permeability of tight hydrocarbon or geothermal reservoirs. One issue is the extent to which both the long systematic and smaller cross fractures can be simultaneously critically stressed under a given stress condition. Fractures in an orthogonal network form by opening mode-I displacements in which the main component is separation of the two fracture walls. This opening is driven by effective tensile stresses as the smallest principle stress acting perpendicular to the fracture wall, which accords with linear elastic fracture mechanics. What has been well recognized in previous field and modelling studies is how both the systematic fractures and perpendicular cross fractures require the minimum principle stress to act perpendicular to the fracture wall. Thus, these networks either require a rotation of the regional stress field or local perturbations in stress field. Using a mechanical finite element modelling software, a geological case of layer perpendicular systematic mode I opening fractures is generated. New in our study is that we not only address tensile stresses at the boundary, but also address models using pore fluid pressure. The local stress in between systematic fractures is then assessed in order to derive the probability and orientation of micro crack propagation using the theory of sub critical crack growth and Griffith's theory. Under effective tensile conditions, the results indicate that in between critically spaced systematic fractures, local effective tensile stresses flip. Therefore the orientation of the least principle stress will rotate 90°, hence an orthogonal fracture is more likely to form. Our new findings for models with pore fluid pressures instead of boundary tension show that the magnitude of effective tension
Energy Technology Data Exchange (ETDEWEB)
Leibfarth, Sara; Moennich, David; Thorwarth, Daniela [University Hospital Tuebingen, Section for Biomedical Physics, Department of Radiation Oncology, Tuebingen (Germany); Simoncic, Urban [University Hospital Tuebingen, Section for Biomedical Physics, Department of Radiation Oncology, Tuebingen (Germany); University of Ljubljana, Faculty of Mathematics and Physics, Ljubljana (Slovenia); Jozef Stefan Institute, Ljubljana (Slovenia); Welz, Stefan; Zips, Daniel [University Hospital Tuebingen, Department of Radiation Oncology, Tuebingen (Germany); Schmidt, Holger; Schwenzer, Nina [University Hospital Tuebingen, Department of Diagnostic and Interventional Radiology, Tuebingen (Germany)
2016-07-15
The aim of this pilot study was to explore simultaneous functional PET/MR for biological characterization of tumors and potential future treatment adaptations. To investigate the extent of complementarity between different PET/MR-based functional datasets, a pairwise correlation analysis was performed. Functional datasets of N=15 head and neck (HN) cancer patients were evaluated. For patients of group A (N=7), combined PET/MR datasets including FDG-PET and ADC maps were available. Patients of group B (N=8) had FMISO-PET, DCE-MRI and ADC maps from combined PET/MRI, an additional dynamic FMISO-PET/CT acquired directly after FMISO tracer injection as well as an FDG-PET/CT acquired a few days earlier. From DCE-MR, parameter maps K{sup trans}, v{sub e} and v{sub p} were obtained with the extended Tofts model. Moreover, parameter maps of mean DCE enhancement, ΔS{sub DCE}, and mean FMISO signal 0-4 min p.i., anti A{sub FMISO}, were derived. Pairwise correlations were quantified using the Spearman correlation coefficient (r) on both a voxel and a regional level within the gross tumor volume. Between some pairs of functional imaging modalities moderate correlations were observed with respect to the median over all patient datasets, whereas distinct correlations were only present on an individual basis. Highest inter-modality median correlations on the voxel level were obtained for FDG/FMISO (r = 0.56), FDG/ anti A{sub FMISO} (r = 0.55), anti A{sub FMISO}/ΔS{sub DCE} (r = 0.46), and FDG/ADC (r = -0.39). Correlations on the regional level showed comparable results. The results of this study suggest that the examined functional datasets provide complementary information. However, only pairwise correlations were examined, and correlations could still exist between combinations of three or more datasets. These results might contribute to the future design of individually adapted treatment approaches based on multiparametric functional imaging.
The geometric and arithmetic volume of Shimura varieties of orthogonal type
Hörmann, Fritz
2015-01-01
This book outlines a functorial theory of integral models of (mixed) Shimura varieties and of their toroidal compactifications, for odd primes of good reduction. This is the integral version, developed in the author's thesis, of the theory invented by Deligne and Pink in the rational case. In addition, the author develops a theory of arithmetic Chern classes of integral automorphic vector bundles with singular metrics using the work of Burgos, Kramer and Kühn. The main application is calculating arithmetic volumes or "heights" of Shimura varieties of orthogonal type using Borcherds' famous modular forms with their striking product formula-an idea due to Bruinier-Burgos-Kühn and Kudla. This should be seen as an Arakelov analogue of the classical calculation of volumes of orthogonal locally symmetric spaces by Siegel and Weil. In the latter theory, the volumes are related to special values of (normalized) Siegel Eisenstein series. In this book, it is proved that the Arakelov analogues are related to special d...
A Data Forward Stepwise Fitting Algorithm Based on Orthogonal Function System
Directory of Open Access Journals (Sweden)
Li Han-Ju
2017-01-01
Full Text Available Data fitting is the main method of functional data analysis, and it is widely used in the fields of economy, social science, engineering technology and so on. Least square method is the main method of data fitting, but the least square method is not convergent, no memory property, big fitting error and it is easy to over fitting. Based on the orthogonal trigonometric function system, this paper presents a data forward stepwise fitting algorithm. This algorithm takes forward stepwise fitting strategy, each time using the nearest base function to fit the residual error generated by the previous base function fitting, which makes the residual mean square error minimum. In this paper, we theoretically prove the convergence, the memory property and the fitting error diminishing character for the algorithm. Experimental results show that the proposed algorithm is effective, and the fitting performance is better than that of the least square method and the forward stepwise fitting algorithm based on the non-orthogonal function system.
On the 2-orthogonal polynomials and the generalized birth and death processes
Directory of Open Access Journals (Sweden)
Zerouki Ebtissem
2006-01-01
Full Text Available We discuss the connections between the 2-orthogonal polynomials and the generalized birth and death processes. Afterwards, we find the sufficient conditions to give an integral representation of the transition probabilities from these processes.
Cerenkov luminescence tomography based on preconditioning orthogonal matching pursuit
Liu, Haixiao; Hu, Zhenhua; Wang, Kun; Tian, Jie; Yang, Xin
2015-03-01
Cerenkov luminescence imaging (CLI) is a novel optical imaging method and has been proved to be a potential substitute of the traditional radionuclide imaging such as positron emission tomography (PET) and single-photon emission computed tomography (SPECT). This imaging method inherits the high sensitivity of nuclear medicine and low cost of optical molecular imaging. To obtain the depth information of the radioactive isotope, Cerenkov luminescence tomography (CLT) is established and the 3D distribution of the isotope is reconstructed. However, because of the strong absorption and scatter, the reconstruction of the CLT sources is always converted to an ill-posed linear system which is hard to be solved. In this work, the sparse nature of the light source was taken into account and the preconditioning orthogonal matching pursuit (POMP) method was established to effectively reduce the ill-posedness and obtain better reconstruction accuracy. To prove the accuracy and speed of this algorithm, a heterogeneous numerical phantom experiment and an in vivo mouse experiment were conducted. Both the simulation result and the mouse experiment showed that our reconstruction method can provide more accurate reconstruction result compared with the traditional Tikhonov regularization method and the ordinary orthogonal matching pursuit (OMP) method. Our reconstruction method will provide technical support for the biological application for Cerenkov luminescence.
Non-Orthogonal Multiple Access for Ubiquitous Wireless Sensor Networks.
Anwar, Asim; Seet, Boon-Chong; Ding, Zhiguo
2018-02-08
Ubiquitous wireless sensor networks (UWSNs) have become a critical technology for enabling smart cities and other ubiquitous monitoring applications. Their deployment, however, can be seriously hampered by the spectrum available to the sheer number of sensors for communication. To support the communication needs of UWSNs without requiring more spectrum resources, the power-domain non-orthogonal multiple access (NOMA) technique originally proposed for 5th Generation (5G) cellular networks is investigated for UWSNs for the first time in this paper. However, unlike 5G networks that operate in the licensed spectrum, UWSNs mostly operate in unlicensed spectrum where sensors also experience cross-technology interferences from other devices sharing the same spectrum. In this paper, we model the interferences from various sources at the sensors using stochastic geometry framework. To evaluate the performance, we derive a theorem and present new closed form expression for the outage probability of the sensors in a downlink scenario under interference limited environment. In addition, diversity analysis for the ordered NOMA users is performed. Based on the derived outage probability, we evaluate the average link throughput and energy consumption efficiency of NOMA against conventional orthogonal multiple access (OMA) technique in UWSNs. Further, the required computational complexity for the NOMA users is presented.
Orthogonal cutting of laser beam melted parts
Götze, Elisa; Zanger, Frederik; Schulze, Volker
2018-05-01
The finishing process of parts manufactured by laser beam melting is of high concern due to the lack of surface accuracy. Therefore, the focus of this work lies on the influence of the build-up direction of the parts and their effect on the finishing process. The orthogonal cutting reveals findings in the fields of chip formation, involved forces and temperatures appearing during machining. In the investigations, the cutting depth was varied between 0.05 and 0.15 mm representing a finishing process and the cutting velocity ranges from 30 to 200 m/min depending on the material. The experiments contain the materials stainless steel (AISI 316L), titanium (Ti6Al4V) and nickel-base alloy (IN718). The two materials named latter are of high interest in the aerospace sector and at the same time titanium is used in the medical field due to its biocompatibility. For the materials IN718 and Ti6Al4V a negative rake angle of -7.5° and for stainless steel a rake angle of 12.5° are chosen for the cutting experiments. The results provide the base for processing strategies. Therefore, the specimens were solely laser beam melted without post-processing like heat treatment. The evaluation of the experiments shows that an increase in cutting speed has different effects depending on the material. For stainless steel the measured forces regarding the machining direction to the layers approach the same values. In contrast, the influence of the layers regarding the forces appearing during orthogonal cutting of the materials IN718 and Ti6Al4V differ for lower cutting speeds.
Optimized Projection Matrix for Compressive Sensing
Directory of Open Access Journals (Sweden)
Jianping Xu
2010-01-01
Full Text Available Compressive sensing (CS is mainly concerned with low-coherence pairs, since the number of samples needed to recover the signal is proportional to the mutual coherence between projection matrix and sparsifying matrix. Until now, papers on CS always assume the projection matrix to be a random matrix. In this paper, aiming at minimizing the mutual coherence, a method is proposed to optimize the projection matrix. This method is based on equiangular tight frame (ETF design because an ETF has minimum coherence. It is impossible to solve the problem exactly because of the complexity. Therefore, an alternating minimization type method is used to find a feasible solution. The optimally designed projection matrix can further reduce the necessary number of samples for recovery or improve the recovery accuracy. The proposed method demonstrates better performance than conventional optimization methods, which brings benefits to both basis pursuit and orthogonal matching pursuit.
Projection correlation between two random vectors.
Zhu, Liping; Xu, Kai; Li, Runze; Zhong, Wei
2017-12-01
We propose the use of projection correlation to characterize dependence between two random vectors. Projection correlation has several appealing properties. It equals zero if and only if the two random vectors are independent, it is not sensitive to the dimensions of the two random vectors, it is invariant with respect to the group of orthogonal transformations, and its estimation is free of tuning parameters and does not require moment conditions on the random vectors. We show that the sample estimate of the projection correction is [Formula: see text]-consistent if the two random vectors are independent and root-[Formula: see text]-consistent otherwise. Monte Carlo simulation studies indicate that the projection correlation has higher power than the distance correlation and the ranks of distances in tests of independence, especially when the dimensions are relatively large or the moment conditions required by the distance correlation are violated.
Eising, Selma; Xin, Bo-Tao; Kleinpenning, Fleur; Heming, Juriaan; Florea, Bogdan; Overkleeft, Herman; Bonger, Kimberly Michelle
2018-05-28
Bioorthogonal chemistry can be used for the selective modification of biomolecules without interfering with any other functionality present. Recent developments in the field provided orthogonal bioorthogonal reactions for modification of multiple biomolecules simultaneously. During our research, we have observed exceptional high reaction rates in the bioorthogonal inverse electron-demand Diels-Alder (iEDDA) reaction between non-strained vinylboronic acids (VBAs) and dipyridyl-s-tetrazines relative to that of tetrazines bearing a methyl or phenyl substituent. As VBAs are mild Lewis acids, we hypothesize that coordination of the pyridyl nitrogen to the boronic acid promotes the tetrazine ligation. Here, we explore the molecular basis and scope of the VBA-tetrazine ligation in more detail and benefit from its unique reactivity in the simultaneous orthogonal tetrazine labelling of two proteins modified with VBA and norbornene, a widely used strained alkene. We further show that the two orthogonal iEDDA reactions can be carried out in living cells by labelling of the proteasome using a non-selective probe equipped with a VBA and a subunit-selective one bearing a norbornene. © 2018 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.
A general transformation to canonical form for potentials in pairwise interatomic interactions.
Walton, Jay R; Rivera-Rivera, Luis A; Lucchese, Robert R; Bevan, John W
2015-06-14
A generalized formulation of explicit force-based transformations is introduced to investigate the concept of a canonical potential in both fundamental chemical and intermolecular bonding. Different classes of representative ground electronic state pairwise interatomic interactions are referenced to a chosen canonical potential illustrating application of such transformations. Specifically, accurately determined potentials of the diatomic molecules H2, H2(+), HF, LiH, argon dimer, and one-dimensional dissociative coordinates in Ar-HBr, OC-HF, and OC-Cl2 are investigated throughout their bound potentials. Advantages of the current formulation for accurately evaluating equilibrium dissociation energies and a fundamentally different unified perspective on nature of intermolecular interactions will be emphasized. In particular, this canonical approach has significance to previous assertions that there is no very fundamental distinction between van der Waals bonding and covalent bonding or for that matter hydrogen and halogen bonds.
Fast pairwise structural RNA alignments by pruning of the dynamical programming matrix
DEFF Research Database (Denmark)
Havgaard, Jakob Hull; Torarinsson, Elfar; Gorodkin, Jan
2007-01-01
and backtracked in a normal fashion. Finally, the FOLDALIGN algorithm has also been updated with a better memory implementation and an improved energy model. With these improvements in the algorithm, the FOLDALIGN software package provides the molecular biologist with an efficient and user-friendly tool...... the advantage of providing the constraints dynamically. This has been included in a new implementation of the FOLDALIGN algorithm for pairwise local or global structural alignment of RNA sequences. It is shown that time and memory requirements are dramatically lowered while overall performance is maintained....... Furthermore, a new divide and conquer method is introduced to limit the memory requirement during global alignment and backtrack of local alignment. All branch points in the computed RNA structure are found and used to divide the structure into smaller unbranched segments. Each segment is then realigned...
Linear VSS and Distributed Commitments Based on Secret Sharing and Pairwise Checks
DEFF Research Database (Denmark)
Fehr, Serge; Maurer, Ueli M.
2002-01-01
. VSS and DC are main building blocks for unconditional secure multi-party computation protocols. This general approach covers all known linear VSS and DC schemes. The main theorem states that the security of a scheme is equivalent to a pure linear-algebra condition on the linear mappings (e.......g. described as matrices and vectors) describing the scheme. The security of all known schemes follows as corollaries whose proofs are pure linear-algebra arguments, in contrast to some hybrid arguments used in the literature. Our approach is demonstrated for the CDM DC scheme, which we generalize to be secure......We present a general treatment of all non-cryptographic (i.e., information-theoretically secure) linear veriable-secret-sharing (VSS) and distributed-commitment (DC) schemes, based on an underlying secret sharing scheme, pairwise checks between players, complaints, and accusations of the dealer...
Orthogonality and quantum geometry: Towards a relational reconstruction of quantum theory
Zhong, S.
2015-01-01
This thesis is an in-depth mathematical study of the non-orthogonality relation between the (pure) states of quantum systems. In Chapter 2, I define quantum Kripke frames, the protagonists of this thesis. A quantum Kripke frame is a Kripke frame in which the binary relation possesses some simple
Axial buckling scrutiny of doubly orthogonal slender nanotubes via nonlocal continuum theory
Energy Technology Data Exchange (ETDEWEB)
Kiani, Keivan [K.N. Toosi University of Technolog, Tehran (Iran, Islamic Republic of)
2015-10-15
Using nonlocal Euler-Bernoulli beam theory, buckling behavior of elastically embedded Doubly orthogonal single-walled carbon nanotubes (DOSWCNTs) is studied. The nonlocal governing equations are obtained. In fact, these are coupled fourth-order integroordinary differential equations which are very difficult to be solved explicitly. As an alternative solution, Galerkin approach in conjunction with assumed mode method is employed, and the axial compressive buckling load of the nanosystem is evaluated. For DOSWCNTs with simply supported tubes, the influences of the slenderness ratio, aspect ratio, intertube free space, small-scale parameter, and properties of the surrounding elastic matrix on the axial buckling load of the nanosystem are addressed. The proposed model could be considered as a pivotal step towards better understanding the buckling behavior of more complex nanosystems such as doubly orthogonal membranes or even jungles of carbon nanotubes.
The investigation of the non-orthogonal basis expansion method for a three-fermion system
International Nuclear Information System (INIS)
Baoqiu Chen; Kentucky Univ., Lexington, KY
1992-01-01
In this paper, the non-orthogonal basis expansion method has been extended to solve a three-fermion system. The radial wavefunction of such a system is expanded in terms of a non-orthogonal Gaussian basis. All matrix elements of the Hamiltonian, including the central, tensor and spin-orbit potentials are derived in analytical forms. The new method simplifies the three-body system calculations, which are usually rather tedious by other methods. The method can be used to calculate energies for both the ground state and low excited states and has been used further to investigate the other nuclear properties of a three-body system such as Λ 3 H. (Author)
Energy Technology Data Exchange (ETDEWEB)
Berlin, V. V.; Murav' ev, O. A.; Golubev, A. V.
2012-03-15
A mathematical description of a closed control system with allowance for pressure fluctuations in the head system, which makes it possible to analyze the regime stability of orthogonal generating sets at tidal electric power plants when operating in the complete range of heads, outputs, and rotational speeds, and to select parameters of the control system, is obtained for an orthogonal hydroturbine and a generator with a load regulator.
International Nuclear Information System (INIS)
Berlin, V. V.; Murav’ev, O. A.; Golubev, A. V.
2012-01-01
A mathematical description of a closed control system with allowance for pressure fluctuations in the head system, which makes it possible to analyze the regime stability of orthogonal generating sets at tidal electric power plants when operating in the complete range of heads, outputs, and rotational speeds, and to select parameters of the control system, is obtained for an orthogonal hydroturbine and a generator with a load regulator.
Orthogonal feature selection method. [For preprocessing of man spectral data
Energy Technology Data Exchange (ETDEWEB)
Kowalski, B R [Univ. of Washington, Seattle; Bender, C F
1976-01-01
A new method of preprocessing spectral data for extraction of molecular structural information is desired. This SELECT method generates orthogonal features that are important for classification purposes and that also retain their identity to the original measurements. A brief introduction to chemical pattern recognition is presented. A brief description of the method and an application to mass spectral data analysis follow. (BLM)
Directory of Open Access Journals (Sweden)
Sirod Sirisup
2012-01-01
the individual function of each POD mode used in the projective integration method. It is found that the first POD mode can capture basic flow behaviors but the overall dynamic is rather inaccurate. The second and the third POD modes assist the first mode by correcting magnitudes and phases of vorticity fields. However, adding the fifth POD mode in the model leads to some incorrect results in phase-shift forms for both drag and lift coefficients. This suggests the optimal number of POD modes to use in the projective integration method.
Performance of super-orthogonal space-time trellis code in a multipath environment
CSIR Research Space (South Africa)
Sokoya, OA
2007-09-01
Full Text Available This paper investigates the performance of Super-Orthogonal Space-time Trellis Code (SOSTTC) designed primarily for non-frequency selective (i.e. flat) fading channel but now applied to a frequency selective fading channel. A new decoding trellis...
Directory of Open Access Journals (Sweden)
Hon Cheng Muh
Full Text Available Allergy is a major health problem in industrialized countries. The number of transgenic food crops is growing rapidly creating the need for allergenicity assessment before they are introduced into human food chain. While existing bioinformatic methods have achieved good accuracies for highly conserved sequences, the discrimination of allergens and non-allergens from allergen-like non-allergen sequences remains difficult. We describe AllerHunter, a web-based computational system for the assessment of potential allergenicity and allergic cross-reactivity in proteins. It combines an iterative pairwise sequence similarity encoding scheme with SVM as the discriminating engine. The pairwise vectorization framework allows the system to model essential features in allergens that are involved in cross-reactivity, but not limited to distinct sets of physicochemical properties. The system was rigorously trained and tested using 1,356 known allergen and 13,449 putative non-allergen sequences. Extensive testing was performed for validation of the prediction models. The system is effective for distinguishing allergens and non-allergens from allergen-like non-allergen sequences. Testing results showed that AllerHunter, with a sensitivity of 83.4% and specificity of 96.4% (accuracy = 95.3%, area under the receiver operating characteristic curve AROC = 0.928+/-0.004 and Matthew's correlation coefficient MCC = 0.738, performs significantly better than a number of existing methods using an independent dataset of 1443 protein sequences. AllerHunter is available at (http://tiger.dbs.nus.edu.sg/AllerHunter.
Critical points for finite Fibonacci chains of point delta-interactions and orthogonal polynomials
International Nuclear Information System (INIS)
De Prunele, E
2011-01-01
For a one-dimensional Schroedinger operator with a finite number n of point delta-interactions with a common intensity, the parameters are the intensity, the n - 1 intercenter distances and the mass. Critical points are points in the parameters space of the Hamiltonian where one bound state appears or disappears. The study of critical points for Hamiltonians with point delta-interactions arranged along a Fibonacci chain is shown to be closely related to the study of the so-called Fibonacci operator, a discrete one-dimensional Schroedinger-type operator, which occurs in the context of tight binding Hamiltonians. These critical points are the zeros of orthogonal polynomials previously studied in the context of special diatomic linear chains with elastic nearest-neighbor interaction. Properties of the zeros (location, asymptotic behavior, gaps, ...) are investigated. The perturbation series from the solvable periodic case is determined. The measure which yields orthogonality is investigated numerically from the zeros. It is shown that the transmission coefficient at zero energy can be expressed in terms of the orthogonal polynomials and their associated polynomials. In particular, it is shown that when the number of point delta-interactions is equal to a Fibonacci number minus 1, i.e. when the intervals between point delta-interactions form a palindrome, all the Fibonacci chains at critical points are completely transparent at zero energy. (paper)
International Nuclear Information System (INIS)
Li Shun; Zhang Sijiong
2014-01-01
A numerical model is presented to simulate the influence function of deformable mirror actuators. The numerical model is formed by Bessel Fourier orthogonal functions, which are constituted of Bessel orthogonal functions and a Fourier basis. A detailed comparison is presented between the new Bessel Fourier model, the Zernike model, the Gaussian influence function and the modified Gaussian influence function. Numerical experiments indicate that the new numerical model is easy to use and more accurate compared with other numerical models. The new numerical model can be used for describing deformable mirror performances and numerical simulations of adaptive optics systems. (research papers)
Radar Measurements of Ocean Surface Waves using Proper Orthogonal Decomposition
2017-03-30
Golinval, 2002, Physical interpretation of the proper orthogonal modes using the singular value decomposition, Journal of Sound and Vibration, 249...complex and contain contributions from the environment (e.g., wind, waves, currents) as well as artifacts associated with electromagnetic (EM) (wave...Although there is no physical basis/ interpretation inherent to the method because it is purely a mathematical tool, there has been an increasing
Islam, Muhammad F.; Islam, Mohammed N.
2012-04-01
The objective of this paper is to develop a novel approach for encryption and compression of biometric information utilizing orthogonal coding and steganography techniques. Multiple biometric signatures are encrypted individually using orthogonal codes and then multiplexed together to form a single image, which is then embedded in a cover image using the proposed steganography technique. The proposed technique employs three least significant bits for this purpose and a secret key is developed to choose one from among these bits to be replaced by the corresponding bit of the biometric image. The proposed technique offers secure transmission of multiple biometric signatures in an identification document which will be protected from unauthorized steganalysis attempt.
Vector 33: A reduce program for vector algebra and calculus in orthogonal curvilinear coordinates
Harper, David
1989-06-01
This paper describes a package with enables REDUCE 3.3 to perform algebra and calculus operations upon vectors. Basic algebraic operations between vectors and between scalars and vectors are provided, including scalar (dot) product and vector (cross) product. The vector differential operators curl, divergence, gradient and Laplacian are also defined, and are valid in any orthogonal curvilinear coordinate system. The package is written in RLISP to allow algebra and calculus to be performed using notation identical to that for operations. Scalars and vectors can be mixed quite freely in the same expression. The package will be of interest to mathematicians, engineers and scientists who need to perform vector calculations in orthogonal curvilinear coordinates.
Projective block Lanczos algorithm for dense, Hermitian eigensystems
International Nuclear Information System (INIS)
Webster, F.; Lo, G.C.
1996-01-01
Projection operators are used to effect open-quotes deflation by restrictionclose quotes and it is argued that this is an optimal Lanczos algorithm for memory minimization. Algorithmic optimization is constrained to dense, Hermitian eigensystems where a significant number of the extreme eigenvectors must be obtained reliably and completely. The defining constraints are operator algebra without a matrix representation and semi-orthogonalization without storage of Krylov vectors. other semi-orthogonalization strategies for Lanczos algorithms and conjugate gradient techniques are evaluated within these constraints. Large scale, sparse, complex numerical experiments are performed on clusters of magnetic dipoles, a quantum many-body system that is not block-diagonalizable. Plane-wave, density functional theory of beryllium clusters provides examples of dense complex eigensystems. Use of preconditioners and spectral transformations is evaluated in a preprocessor prior to a high accuracy self-consistent field calculation. 25 refs., 3 figs., 5 tabs
Díaz Mendoza, C.; Orive, R.; Pijeira Cabrera, H.
2008-10-01
We study the asymptotic behavior of the zeros of a sequence of polynomials whose weighted norms, with respect to a sequence of weight functions, have the same nth root asymptotic behavior as the weighted norms of certain extremal polynomials. This result is applied to obtain the (contracted) weak zero distribution for orthogonal polynomials with respect to a Sobolev inner product with exponential weights of the form e-[phi](x), giving a unified treatment for the so-called Freud (i.e., when [phi] has polynomial growth at infinity) and Erdös (when [phi] grows faster than any polynomial at infinity) cases. In addition, we provide a new proof for the bound of the distance of the zeros to the convex hull of the support for these Sobolev orthogonal polynomials.
An orthogonality condition model treatment of elastic and inelastic (α, 12C) scattering
International Nuclear Information System (INIS)
Suzuki, Y.; Imanishi, B.
1981-02-01
Elastic and inelastic scattering of α-particles on the deformed nucleus 12 C are investigated in the range of incident α-particle energies of 9 to 11 MeV by using the coupled-channel method with orthogonality condition. A doubly folded potential generated by the shell model wave functions of the α-particle and the deformed nucleus 12 C is employed for the relative motion between the α-particle and 12 C. Good agreement between theory and experiment is obtained for the elastic and inelastic angular distributions and the resonance structures. It is found, from the Born series expansion of the T-matrix, that the orthogonality constraint stresses the effects of the channel-coupling between the elastic and inelastic processes, and it indicates that the DWBA does not work well in this system. (author)
International Nuclear Information System (INIS)
Huang, Jinhong; Guo, Li; Feng, Qianjin; Chen, Wufan; Feng, Yanqiu
2015-01-01
Image reconstruction from undersampled k-space data accelerates magnetic resonance imaging (MRI) by exploiting image sparseness in certain transform domains. Employing image patch representation over a learned dictionary has the advantage of being adaptive to local image structures and thus can better sparsify images than using fixed transforms (e.g. wavelets and total variations). Dictionary learning methods have recently been introduced to MRI reconstruction, and these methods demonstrate significantly reduced reconstruction errors compared to sparse MRI reconstruction using fixed transforms. However, the synthesis sparse coding problem in dictionary learning is NP-hard and computationally expensive. In this paper, we present a novel sparsity-promoting orthogonal dictionary updating method for efficient image reconstruction from highly undersampled MRI data. The orthogonality imposed on the learned dictionary enables the minimization problem in the reconstruction to be solved by an efficient optimization algorithm which alternately updates representation coefficients, orthogonal dictionary, and missing k-space data. Moreover, both sparsity level and sparse representation contribution using updated dictionaries gradually increase during iterations to recover more details, assuming the progressively improved quality of the dictionary. Simulation and real data experimental results both demonstrate that the proposed method is approximately 10 to 100 times faster than the K-SVD-based dictionary learning MRI method and simultaneously improves reconstruction accuracy. (paper)
Huang, Jinhong; Guo, Li; Feng, Qianjin; Chen, Wufan; Feng, Yanqiu
2015-07-21
Image reconstruction from undersampled k-space data accelerates magnetic resonance imaging (MRI) by exploiting image sparseness in certain transform domains. Employing image patch representation over a learned dictionary has the advantage of being adaptive to local image structures and thus can better sparsify images than using fixed transforms (e.g. wavelets and total variations). Dictionary learning methods have recently been introduced to MRI reconstruction, and these methods demonstrate significantly reduced reconstruction errors compared to sparse MRI reconstruction using fixed transforms. However, the synthesis sparse coding problem in dictionary learning is NP-hard and computationally expensive. In this paper, we present a novel sparsity-promoting orthogonal dictionary updating method for efficient image reconstruction from highly undersampled MRI data. The orthogonality imposed on the learned dictionary enables the minimization problem in the reconstruction to be solved by an efficient optimization algorithm which alternately updates representation coefficients, orthogonal dictionary, and missing k-space data. Moreover, both sparsity level and sparse representation contribution using updated dictionaries gradually increase during iterations to recover more details, assuming the progressively improved quality of the dictionary. Simulation and real data experimental results both demonstrate that the proposed method is approximately 10 to 100 times faster than the K-SVD-based dictionary learning MRI method and simultaneously improves reconstruction accuracy.
Downlink Non-Orthogonal Multiple Access (NOMA) in Poisson Networks
Ali, Konpal S.
2018-03-21
A network model is considered where Poisson distributed base stations transmit to $N$ power-domain non-orthogonal multiple access (NOMA) users (UEs) each that employ successive interference cancellation (SIC) for decoding. We propose three models for the clustering of NOMA UEs and consider two different ordering techniques for the NOMA UEs: mean signal power-based and instantaneous signal-to-intercell-interference-and-noise-ratio-based. For each technique, we present a signal-to-interference-and-noise ratio analysis for the coverage of the typical UE. We plot the rate region for the two-user case and show that neither ordering technique is consistently superior to the other. We propose two efficient algorithms for finding a feasible resource allocation that maximize the cell sum rate $\\\\mathcal{R}_{\\ m tot}$, for general $N$, constrained to: 1) a minimum rate $\\\\mathcal{T}$ for each UE, 2) identical rates for all UEs. We show the existence of: 1) an optimum $N$ that maximizes the constrained $\\\\mathcal{R}_{\\ m tot}$ given a set of network parameters, 2) a critical SIC level necessary for NOMA to outperform orthogonal multiple access. The results highlight the importance in choosing the network parameters $N$, the constraints, and the ordering technique to balance the $\\\\mathcal{R}_{\\ m tot}$ and fairness requirements. We also show that interference-aware UE clustering can significantly improve performance.
Statistical benchmarking for orthogonal electrostatic quantum dot qubit devices
Gamble, John; Frees, Adam; Friesen, Mark; Coppersmith, S. N.
2014-03-01
Quantum dots in semiconductor systems have emerged as attractive candidates for the implementation of quantum information processors because of the promise of scalability, manipulability, and integration with existing classical electronics. A limitation in current devices is that the electrostatic gates used for qubit manipulation exhibit strong cross-capacitance, presenting a barrier for practical scale-up. Here, we introduce a statistical framework for making precise the notion of orthogonality. We apply our method to analyze recently implemented designs at the University of Wisconsin-Madison that exhibit much increased orthogonal control than was previously possible. We then use our statistical modeling to future device designs, providing practical guidelines for devices to have robust control properties. Sandia National Laboratories is a multi-program laboratory managed and operated by Sandia Corporation, a wholly owned subsidiary of Lockheed Martin Corporation, for the U.S. Department of Energy Nuclear Security Administration under contract DE-AC04-94AL85000. The views and conclusions contained in this document are those of the authors and should not be interpreted as representing the official policies, either expressly or implied, of the US Government. This work was supported in part by the Laboratory Directed Research and Development program at Sandia National Laboratories, by ARO (W911NF-12-0607), and by the United States Department of Defense.
Super-Orthogonal Space-Time Turbo Transmit Diversity for CDMA
Directory of Open Access Journals (Sweden)
Pieter G. W. van Rooyen
2005-05-01
Full Text Available Studies have shown that transmit and receive diversity employing a combination of multiple transmit-receive antennas (given ideal channel state information (CSI and independent fading between antenna pairs will potentially yield maximum achievable system capacity. In this paper, the concept of a layered super-orthogonal turbo transmit diversity (SOTTD for downlink direct-sequence code-division multiple-access (CDMA systems is explored. This open-loop transmit diversity technique improves the downlink performance by using a small number of antenna elements at the base station and a single antenna at the handset. In the proposed technique, low-rate super-orthogonal code-spread CDMA is married with code-division transmit diversity (CDTD. At the mobile receiver, space-time (ST RAKE CDTD processing is combined with iterative turbo code-spread decoding to yield large ST gains. The performance of the SOTTD system is compared with single- and multiantenna turbo-coded (TC CDTD systems evaluated over a frequency-selective Rayleigh fading channel. The evaluation is done both by means of analysis and computer simulations. The performance results illustrate the superior performance of SOTTD compared to TC CDTD systems over practically the complete useful capacity range of CDMA. It is shown that the performance degradation characteristic of TC CDTD at low system loads (due to the inherent TC error floor is alleviated by the SOTTD system.
Downlink Non-Orthogonal Multiple Access (NOMA) in Poisson Networks
Ali, Konpal S.; Haenggi, Martin; Elsawy, Hesham; Chaaban, Anas; Alouini, Mohamed-Slim
2018-01-01
A network model is considered where Poisson distributed base stations transmit to $N$ power-domain non-orthogonal multiple access (NOMA) users (UEs) each that employ successive interference cancellation (SIC) for decoding. We propose three models for the clustering of NOMA UEs and consider two different ordering techniques for the NOMA UEs: mean signal power-based and instantaneous signal-to-intercell-interference-and-noise-ratio-based. For each technique, we present a signal-to-interference-and-noise ratio analysis for the coverage of the typical UE. We plot the rate region for the two-user case and show that neither ordering technique is consistently superior to the other. We propose two efficient algorithms for finding a feasible resource allocation that maximize the cell sum rate $\\mathcal{R}_{\\rm tot}$, for general $N$, constrained to: 1) a minimum rate $\\mathcal{T}$ for each UE, 2) identical rates for all UEs. We show the existence of: 1) an optimum $N$ that maximizes the constrained $\\mathcal{R}_{\\rm tot}$ given a set of network parameters, 2) a critical SIC level necessary for NOMA to outperform orthogonal multiple access. The results highlight the importance in choosing the network parameters $N$, the constraints, and the ordering technique to balance the $\\mathcal{R}_{\\rm tot}$ and fairness requirements. We also show that interference-aware UE clustering can significantly improve performance.
On cyclic orthogonal double covers of circulant graphs by special infinite graphs
Directory of Open Access Journals (Sweden)
R. El-Shanawany
2017-12-01
Full Text Available In this article, a technique to construct cyclic orthogonal double covers (CODCs of regular circulant graphs by certain infinite graph classes such as complete bipartite and tripartite graphs and disjoint union of butterfly and K1,2n−10 is introduced.
DEFF Research Database (Denmark)
Marcano, Andrea; Christiansen, Henrik Lehrmann
2017-01-01
Among the key technologies that have been identified as capacity boosters for fifth generation - 5G - mobile networks, are millimeter wave (mmWave) transmissions and non-orthogonal multiple access (NOMA). The large amount of spectrum available at mmWave frequencies combined with a more effective...... use of available resources, helps improving the overall capacity. NOMA, unlike orthogonal multiple access (OMA) methods, allows sharing the same frequency resources at the same time, by implementing adaptive power allocation. In this paper we present a performance analysis of NOMA in mmWave cells...
GraphAlignment: Bayesian pairwise alignment of biological networks
Directory of Open Access Journals (Sweden)
Kolář Michal
2012-11-01
Full Text Available Abstract Background With increased experimental availability and accuracy of bio-molecular networks, tools for their comparative and evolutionary analysis are needed. A key component for such studies is the alignment of networks. Results We introduce the Bioconductor package GraphAlignment for pairwise alignment of bio-molecular networks. The alignment incorporates information both from network vertices and network edges and is based on an explicit evolutionary model, allowing inference of all scoring parameters directly from empirical data. We compare the performance of our algorithm to an alternative algorithm, Græmlin 2.0. On simulated data, GraphAlignment outperforms Græmlin 2.0 in several benchmarks except for computational complexity. When there is little or no noise in the data, GraphAlignment is slower than Græmlin 2.0. It is faster than Græmlin 2.0 when processing noisy data containing spurious vertex associations. Its typical case complexity grows approximately as O(N2.6. On empirical bacterial protein-protein interaction networks (PIN and gene co-expression networks, GraphAlignment outperforms Græmlin 2.0 with respect to coverage and specificity, albeit by a small margin. On large eukaryotic PIN, Græmlin 2.0 outperforms GraphAlignment. Conclusions The GraphAlignment algorithm is robust to spurious vertex associations, correctly resolves paralogs, and shows very good performance in identification of homologous vertices defined by high vertex and/or interaction similarity. The simplicity and generality of GraphAlignment edge scoring makes the algorithm an appropriate choice for global alignment of networks.
Discrete Orthogonal Transforms and Neural Networks for Image Interpolation
Directory of Open Access Journals (Sweden)
J. Polec
1999-09-01
Full Text Available In this contribution we present transform and neural network approaches to the interpolation of images. From transform point of view, the principles from [1] are modified for 1st and 2nd order interpolation. We present several new interpolation discrete orthogonal transforms. From neural network point of view, we present interpolation possibilities of multilayer perceptrons. We use various configurations of neural networks for 1st and 2nd order interpolation. The results are compared by means of tables.
Transfer Function Identification Using Orthogonal Fourier Transform Modeling Functions
Morelli, Eugene A.
2013-01-01
A method for transfer function identification, including both model structure determination and parameter estimation, was developed and demonstrated. The approach uses orthogonal modeling functions generated from frequency domain data obtained by Fourier transformation of time series data. The method was applied to simulation data to identify continuous-time transfer function models and unsteady aerodynamic models. Model fit error, estimated model parameters, and the associated uncertainties were used to show the effectiveness of the method for identifying accurate transfer function models from noisy data.
Lu, Chao; Li, Xubin; Wu, Dongsheng; Zheng, Lianqing; Yang, Wei
2016-01-12
In aqueous solution, solute conformational transitions are governed by intimate interplays of the fluctuations of solute-solute, solute-water, and water-water interactions. To promote molecular fluctuations to enhance sampling of essential conformational changes, a common strategy is to construct an expanded Hamiltonian through a series of Hamiltonian perturbations and thereby broaden the distribution of certain interactions of focus. Due to a lack of active sampling of configuration response to Hamiltonian transitions, it is challenging for common expanded Hamiltonian methods to robustly explore solvent mediated rare conformational events. The orthogonal space sampling (OSS) scheme, as exemplified by the orthogonal space random walk and orthogonal space tempering methods, provides a general framework for synchronous acceleration of slow configuration responses. To more effectively sample conformational transitions in aqueous solution, in this work, we devised a generalized orthogonal space tempering (gOST) algorithm. Specifically, in the Hamiltonian perturbation part, a solvent-accessible-surface-area-dependent term is introduced to implicitly perturb near-solute water-water fluctuations; more importantly in the orthogonal space response part, the generalized force order parameter is generalized as a two-dimension order parameter set, in which essential solute-solvent and solute-solute components are separately treated. The gOST algorithm is evaluated through a molecular dynamics simulation study on the explicitly solvated deca-alanine (Ala10) peptide. On the basis of a fully automated sampling protocol, the gOST simulation enabled repetitive folding and unfolding of the solvated peptide within a single continuous trajectory and allowed for detailed constructions of Ala10 folding/unfolding free energy surfaces. The gOST result reveals that solvent cooperative fluctuations play a pivotal role in Ala10 folding/unfolding transitions. In addition, our assessment
Kernel versions of some orthogonal transformations
DEFF Research Database (Denmark)
Nielsen, Allan Aasbjerg
Kernel versions of orthogonal transformations such as principal components are based on a dual formulation also termed Q-mode analysis in which the data enter into the analysis via inner products in the Gram matrix only. In the kernel version the inner products of the original data are replaced...... by inner products between nonlinear mappings into higher dimensional feature space. Via kernel substitution also known as the kernel trick these inner products between the mappings are in turn replaced by a kernel function and all quantities needed in the analysis are expressed in terms of this kernel...... function. This means that we need not know the nonlinear mappings explicitly. Kernel principal component analysis (PCA) and kernel minimum noise fraction (MNF) analyses handle nonlinearities by implicitly transforming data into high (even infinite) dimensional feature space via the kernel function...
Theory of pairwise coupling embedded in more general local dispersion relations
International Nuclear Information System (INIS)
Fuchs, V.; Bers, A.; Harten, L.
1985-01-01
Earlier work on the mode conversion theory by Fuchs, Ko, and Bers is detailed and expanded upon, and its relation to energy conservation is discussed. Given a local dispersion relation, D(ω; k, z) = 0, describing stable waves excited at an externally imposed frequency ω, a pairwise mode-coupling event embedded therein is extracted by expanding D(k, z) around a contour k = k/sub c/(z) given by partialD/partialk = 0. The branch points of D(k, z) = 0 are the turning points of a second-order differential-equation representation. In obtaining the fraction of mode-converted energy, the connection formula and conservation of energy must be used together. Also, proper attention must be given to distinguish cases for which the coupling disappears or persists upon confluence of the branches, a property which is shown to depend on the forward (v/sub g/v/sub ph/>0) or backward (v/sub g/v/sub ph/<0) nature of the waves. Examples occurring in ion-cyclotron and lower-hybrid heating are presented, illustrating the use of the theory
Energy Technology Data Exchange (ETDEWEB)
Bertel, I.M.; Churakov, V.V.; Petukhov, V.O.; Prokopov, A.P.; Trushin, S.A.; Voitovich, A.P.
1980-01-01
The competition of orthogonally-polarized waves with various differences in the wave Q-factors and active medium pressures is studied. The possibility of controlling the parameters of a pulsed CO/sub 2/ laser by changing the value of the amplitude anisotropy of the cavity is demonstrated. The duration of the emission pulse for one of two orthogonal polarizations was reduced by virtually 50%.
Han, Yue; Zheng, Wei; Guo, Junshan; Ma, Yihe; Ding, Junqi; Zhu, Lingkai; Che, Yongqiang; Zhang, Yanpeng
2018-02-01
Abstract . The Three Gorges dam of China is one of the largest and expensive hydropower projects of the world. The four main purposes of the project are flood control,energy production, improved navigation and fresh water supply. The dam project has been completed and running successfully with the potential benefits. However, this project is still a controversial issue among many environmentalists and socialists due to various impacts. This study focuses on the benefit and the impacts of the project, and also evaluates the performance of the project using multi-criteria analysis (MCA) approach from a sustainable perspective. Different sustainability criteria related with the dam project have been identified and used for the ranking and rating process. The final result of MCA comes with this scoring process and pairwise comparison, which evaluates the performance of the project considering different positive and negative aspects.
Comparative Performance Evaluation of Orthogonal-Signal-Generators-Based Single-Phase PLL Algorithms
DEFF Research Database (Denmark)
Han, Yang; Luo, Mingyu; Zhao, Xin
2016-01-01
The orthogonal signal generator based phase-locked loops (OSG-PLLs) are among the most popular single-phase PLLs within the areas of power electronics and power systems, mainly because they are often easy to be implement and offer a robust performance against the grid disturbances. The main aim o...
The construction of a class of trivariate nonseparable compactly supported orthogonal wavelets
International Nuclear Information System (INIS)
Huang Yongdong; Lei Chongmin; Yang Miao
2009-01-01
In this paper, under a mild condition, the construction of compactly supported orthogonal wavelets is obtained. Wavelets inherit the symmetry of the corresponding scaling function and satisfy the vanishing moment condition originating in the symbols of the scaling function. An example is also given to demonstrate the general theory.
Nucleic acid constructs containing orthogonal site selective recombinases (OSSRs)
Energy Technology Data Exchange (ETDEWEB)
Gilmore, Joshua M.; Anderson, J. Christopher; Dueber, John E.
2017-08-29
The present invention provides for a recombinant nucleic acid comprising a nucleotide sequence comprising a plurality of constructs, wherein each construct independently comprises a nucleotide sequence of interest flanked by a pair of recombinase recognition sequences. Each pair of recombinase recognition sequences is recognized by a distinct recombinase. Optionally, each construct can, independently, further comprise one or more genes encoding a recombinase capable of recognizing the pair of recombinase recognition sequences of the construct. The recombinase can be an orthogonal (non-cross reacting), site-selective recombinase (OSSR).
International Nuclear Information System (INIS)
Darben, P.; Lim-Joon, D.; Chao, M.; Gibbs, P.; Tjandra, J.; Jones, I.T.
2005-01-01
The aim of this study is to compare and contrast the treatment fields designed using CT versus conventional orthogonal X-ray simulation in the treatment of patients with rectal cancer given preoperative chemotherapy and radiotherapy. Nine patients participated in this study. The coverage of treatment fields, the volume of treatment fields, and the position of the anorectal junction in relation to the inferior border of the obturator foramen as the delineator of the pelvic floor were evaluated in each patient using CT and conventional orthogonal X-ray simulation. The results demonstrated undercoverage of the anterior border of the lateral fields of up to 2.5 cm in seven of nine patients when conventional orthogonal X-ray simulation was compared to CT simulation. In addition, the inferior border of the obturator foramen proved to be a poor delineator of the pelvic floor with the anorectal junction situated up to 2 cm superiorly in seven of nine patients. In conclusion, CT simulation is superior to conventional orthogonal X-ray simulation when designing treatment fields for patients with rectal cancer Copyright (2005) Blackwell Publishing Asia Pty Ltd
Pairwise local structural alignment of RNA sequences with sequence similarity less than 40%
DEFF Research Database (Denmark)
Havgaard, Jakob Hull; Lyngsø, Rune B.; Stormo, Gary D.
2005-01-01
detect two genes with low sequence similarity, where the genes are part of a larger genomic region. Results: Here we present such an approach for pairwise local alignment which is based on FILDALIGN and the Sankoff algorithm for simultaneous structural alignment of multiple sequences. We include...... the ability to conduct mutual scans of two sequences of arbitrary length while searching for common local structural motifs of some maximum length. This drastically reduces the complexity of the algorithm. The scoring scheme includes structural parameters corresponding to those available for free energy....... The structure prediction performance for a family is typically around 0.7 using Matthews correlation coefficient. In case (2), the algorithm is successful at locating RNA families with an average sensitivity of 0.8 and a positive predictive value of 0.9 using a BLAST-like hit selection scheme. Availability...
Lindeboom, Jerome A.; Mathura, Keshen R.; Ince, Can
2006-01-01
Tumor microcirculatory characteristics until now have only been assessed by histological examination of biopsies or invasive imaging technique. The recent introduction of orthogonal polarization spectral (OPS) imaging as a new tool for in vivo visualization of human microcirculation makes it
Directory of Open Access Journals (Sweden)
Alejandro Marquez
2013-01-01
Full Text Available This paper studies the application of proper orthogonal decomposition (POD to reduce the order of distributed reactor models with axial and radial diffusion and the implementation of model predictive control (MPC based on discrete-time linear time invariant (LTI reduced-order models. In this paper, the control objective is to keep the operation of the reactor at a desired operating condition in spite of the disturbances in the feed flow. This operating condition is determined by means of an optimization algorithm that provides the optimal temperature and concentration profiles for the system. Around these optimal profiles, the nonlinear partial differential equations (PDEs, that model the reactor are linearized, and afterwards the linear PDEs are discretized in space giving as a result a high-order linear model. POD and Galerkin projection are used to derive the low-order linear model that captures the dominant dynamics of the PDEs, which are subsequently used for controller design. An MPC formulation is constructed on the basis of the low-order linear model. The proposed approach is tested through simulation, and it is shown that the results are good with regard to keep the operation of the reactor.
Non-Orthogonal Multiple Access for Large-Scale 5G Networks: Interference Aware Design
Ali, Konpal S.
2017-09-18
Non-orthogonal multiple access (NOMA) is promoted as a key component of 5G cellular networks. As the name implies, NOMA operation introduces intracell interference (i.e., interference arising within the cell) to the cellular operation. The intracell interference is managed by careful NOMA design (e.g., user clustering and resource allocation) along with successive interference cancellation. However, most of the proposed NOMA designs are agnostic to intercell interference (i.e., interference from outside the cell), which is a major performance limiting parameter in 5G networks. This article sheds light on the drastic negative-impact of intercell interference on the NOMA performance and advocates interference-aware NOMA design that jointly accounts for both intracell and intercell interference. To this end, a case study for fair NOMA operation is presented and intercell interference mitigation techniques for NOMA networks are discussed. This article also investigates the potential of integrating NOMA with two important 5G transmission schemes, namely, full duplex and device-to-device communication. This is important since the ambitious performance defined by the 3rd Generation Partnership Project (3GPP) for 5G is foreseen to be realized via seamless integration of several new technologies and transmission techniques.
DEFF Research Database (Denmark)
Kreft, Stefanie K.; Petersen, Michael Åxman; Nielsen, Mogens Brøndsted
2015-01-01
We study the effects of the proximity of the orthogonal dipole-switching moiety dihydroazulene/vinylheptafulvene (DHA/VHF) to carbon nanotubes (CNTs). The switches are introduced into a micelle surrounding the CNTs, thereby achieving very close proximity between the molecules and the CNTs...... of the CNTs and the resulting reversible redshift of the nanotubes' emission by the change of the molecules' conformation....
Zeininger, Lukas; Stiegler, Lisa M S; Portilla, Luis; Halik, Marcus; Hirsch, Andreas
2018-04-01
Invited for this month's cover picture is the group of Prof. Dr. Andreas Hirsch from Friedrich Alexander University (Germany). The cover picture shows shell-by-shell coated nanoparticle 'chameleons'-wet-chemically surface-modified nanoparticles that can reversibly adjust their dispersibility to entirely orthogonal solvent environments. Read the full text of their Full Paper at https://doi.org/10.1002/open.201800011.
Neural Based Orthogonal Data Fitting The EXIN Neural Networks
Cirrincione, Giansalvo
2008-01-01
Written by three leaders in the field of neural based algorithms, Neural Based Orthogonal Data Fitting proposes several neural networks, all endowed with a complete theory which not only explains their behavior, but also compares them with the existing neural and traditional algorithms. The algorithms are studied from different points of view, including: as a differential geometry problem, as a dynamic problem, as a stochastic problem, and as a numerical problem. All algorithms have also been analyzed on real time problems (large dimensional data matrices) and have shown accurate solutions. Wh
The endoscopic classification of representations orthogonal and symplectic groups
Arthur, James
2013-01-01
Within the Langlands program, endoscopy is a fundamental process for relating automorphic representations of one group with those of another. In this book, Arthur establishes an endoscopic classification of automorphic representations of orthogonal and symplectic groups G. The representations are shown to occur in families (known as global L-packets and A-packets), which are parametrized by certain self-dual automorphic representations of an associated general linear group GL(N). The central result is a simple and explicit formula for the multiplicity in the automorphic discrete spectrum of G
Orthogonal functions, discrete variable representation, and generalized gauss quadratures
DEFF Research Database (Denmark)
Schneider, B. I.; Nygaard, Nicolai
2002-01-01
in the original representation. This has been exploited in bound-state, scattering, and time-dependent problems using the so-called, discrete variable representation (DVR). At the core of this approach is the mathematical three-term recursion relationship satisfied by the classical orthogonal functions...... functions, this is not the case. However, they may be computed in a stable numerical fashion, via the recursion. In essence, this is an application of the well-known Lanczos recursion approach. Once the recursion coefficients are known, it is possible to compute the points and weights of quadratures on...
Directed Formation of DNA Nanoarrays through Orthogonal Self-Assembly
Directory of Open Access Journals (Sweden)
Eugen Stulz
2011-06-01
Full Text Available We describe the synthesis of terpyridine modified DNA strands which selectively form DNA nanotubes through orthogonal hydrogen bonding and metal complexation interactions. The short DNA strands are designed to self-assemble into long duplexes through a sticky-end approach. Addition of weakly binding metals such as Zn(II and Ni(II induces the formation of tubular arrays consisting of DNA bundles which are 50-200 nm wide and 2-50 nm high. TEM shows additional long distance ordering of the terpy-DNA complexes into fibers.
Protein-like Nanoparticles Based on Orthogonal Self-Assembly of Chimeric Peptides.
Jiang, Linhai; Xu, Dawei; Namitz, Kevin E; Cosgrove, Michael S; Lund, Reidar; Dong, He
2016-10-01
A novel two-component self-assembling chimeric peptide is designed where two orthogonal protein folding motifs are linked side by side with precisely defined position relative to one another. The self-assembly is driven by a combination of symmetry controlled molecular packing, intermolecular interactions, and geometric constraint to limit the assembly into compact dodecameric protein nanoparticles. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.
Schmitt, Margaret A; Biddle, Wil; Fisk, John Domenic
2018-04-18
The relative quantitative importance of the factors that determine the fidelity of translation is largely unknown, which makes predicting the extent to which the degeneracy of the genetic code can be broken challenging. Our strategy of using orthogonal tRNA/aminoacyl tRNA synthetase pairs to precisely direct the incorporation of a single amino acid in response to individual sense and nonsense codons provides a suite of related data with which to examine the plasticity of the code. Each directed sense codon reassignment measurement is an in vivo competition experiment between the introduced orthogonal translation machinery and the natural machinery in E. coli. This report discusses 20 new, related genetic codes, in which a targeted E. coli wobble codon is reassigned to tyrosine utilizing the orthogonal tyrosine tRNA/aminoacyl tRNA synthetase pair from Methanocaldococcus jannaschii. One at a time, reassignment of each targeted sense codon to tyrosine is quantified in cells by measuring the fluorescence of GFP variants in which the essential tyrosine residue is encoded by a non-tyrosine codon. Significantly, every wobble codon analyzed may be partially reassigned with efficiencies ranging from 0.8% to 41%. The accumulation of the suite of data enables a qualitative dissection of the relative importance of the factors affecting the fidelity of translation. While some correlation was observed between sense codon reassignment and either competing endogenous tRNA abundance or changes in aminoacylation efficiency of the altered orthogonal system, no single factor appears to predominately drive translational fidelity. Evaluation of relative cellular fitness in each of the 20 quantitatively-characterized proteome-wide tyrosine substitution systems suggests that at a systems level, E. coli is robust to missense mutations.
Directory of Open Access Journals (Sweden)
Asger Nyman Christiansen
2012-11-01
Full Text Available Currently, no objective method exists for estimating the rate of change in the colour of meat. Consequently, the purpose of this work is to develop a procedure capable of monitoring the change in colour of meat over time, environment and ingredients. This provides a useful tool to determine which storage environments and ingredients a manufacturer should add to meat to reduce the rate of change in colour. The procedure consists of taking multi-spectral images of a piece of meat as a function of time, clustering the pixels of these images into categories, including several types of meat, and extracting colour information from each category. The focus has primarily been on achieving an accurate categorisation since this is crucial to develop a useful method. The categorisation is done by applying an orthogonal transformation followed by k-means clustering. The purpose of the orthogonal transformation is to reduce the noise and amount of data while enhancing the difference between the categories. The orthogonal transformations principal components analysis, minimum noise fraction analysis and kernel-based versions of these have been applied to test which produce the most accurate categorisation.
Screening synteny blocks in pairwise genome comparisons through integer programming.
Tang, Haibao; Lyons, Eric; Pedersen, Brent; Schnable, James C; Paterson, Andrew H; Freeling, Michael
2011-04-18
It is difficult to accurately interpret chromosomal correspondences such as true orthology and paralogy due to significant divergence of genomes from a common ancestor. Analyses are particularly problematic among lineages that have repeatedly experienced whole genome duplication (WGD) events. To compare multiple "subgenomes" derived from genome duplications, we need to relax the traditional requirements of "one-to-one" syntenic matchings of genomic regions in order to reflect "one-to-many" or more generally "many-to-many" matchings. However this relaxation may result in the identification of synteny blocks that are derived from ancient shared WGDs that are not of interest. For many downstream analyses, we need to eliminate weak, low scoring alignments from pairwise genome comparisons. Our goal is to objectively select subset of synteny blocks whose total scores are maximized while respecting the duplication history of the genomes in comparison. We call this "quota-based" screening of synteny blocks in order to appropriately fill a quota of syntenic relationships within one genome or between two genomes having WGD events. We have formulated the synteny block screening as an optimization problem known as "Binary Integer Programming" (BIP), which is solved using existing linear programming solvers. The computer program QUOTA-ALIGN performs this task by creating a clear objective function that maximizes the compatible set of synteny blocks under given constraints on overlaps and depths (corresponding to the duplication history in respective genomes). Such a procedure is useful for any pairwise synteny alignments, but is most useful in lineages affected by multiple WGDs, like plants or fish lineages. For example, there should be a 1:2 ploidy relationship between genome A and B if genome B had an independent WGD subsequent to the divergence of the two genomes. We show through simulations and real examples using plant genomes in the rosid superorder that the quota
Source localization using a non-cocentered orthogonal loop and dipole (NCOLD) array
Institute of Scientific and Technical Information of China (English)
Liu Zhaoting; Xu Tongyang
2013-01-01
A uniform array of scalar-sensors with intersensor spacings over a large aperture size generally offers enhanced resolution and source localization accuracy, but it may also lead to cyclic ambiguity. By exploiting the polarization information of impinging waves, an electromagnetic vec-tor-sensor array outperforms the unpolarized scalar-sensor array in resolving this cyclic ambiguity. However, the electromagnetic vector-sensor array usually consists of cocentered orthogonal loops and dipoles (COLD), which is easily subjected to mutual coupling across these cocentered dipoles/loops. As a result, the source localization performance of the COLD array may substantially degrade rather than being improved. This paper proposes a new source localization method with a non-cocentered orthogonal loop and dipole (NCOLD) array. The NCOLD array contains only one dipole or loop on each array grid, and the intersensor spacings are larger than a half-wave-length. Therefore, unlike the COLD array, these well separated dipoles/loops minimize the mutual coupling effects and extend the spatial aperture as well. With the NCOLD array, the proposed method can efficiently exploit the polarization information to offer high localization precision.
Directory of Open Access Journals (Sweden)
Y. Ding
2014-01-01
Full Text Available Both the structural parameter and external excitation have coupling influence on structural response. A new system identification method in time domain is proposed to simultaneously evaluate structural parameter and external excitation. The method can be used for linear and hysteresis nonlinear structural condition assessment based on incomplete structural responses. In this method, the structural excitation is decomposed by orthogonal approximation. With this approximation, the strongly time-variant excitation identification is transformed to gentle time-variant, even constant parameters identification. Then the extended Kalman filter is applied to simultaneously identify state vector including the structural parameters and excitation orthogonal parameters in state space based on incomplete measurements. The proposed method is validated numerically with the simulation of three-story linear and nonlinear structures subject to external force. The external force on the top floor and the structural parameters are simultaneously identified with the proposed system identification method. Results from both simulations indicate that the proposed method is capable of identifing the dynamic load and structural parameters fairly accurately with contaminated incomplete measurement for both of the linear and nonlinear structural systems.
Self-assembly of orthogonal three-axis sensors
International Nuclear Information System (INIS)
Cho, J. H.; Hu, S.; Gracias, D. H.
2008-01-01
Conventional planar microfabrication is widely utilized to construct sensors for the measurement of physical or chemical properties. However, in these devices, the information component measured is typically restricted to only one vectorial axis. Here, we describe a self-assembling strategy that can be utilized to construct three dimensional (3D) cubic devices that facilitate measurement along three axes. This 3D measurement is achieved by arranging sensing elements orthogonally; any sensing element that can be lithographically patterned can be utilized. The 3D arrangement of sensors allows for the measurement of angular and orientation parameters. As an example, we describe a three-axis cantilever based sensor and demonstrate measurement of an evaporated analyte using resonant frequency shifts of cantilevers in each of the x, y, and z axes
Directory of Open Access Journals (Sweden)
Chih-Hong Lin
2015-01-01
Full Text Available Because the V-belt continuously variable transmission (CVT system driven by permanent magnet synchronous motor (PMSM has much unknown nonlinear and time-varying characteristics, the better control performance design for the linear control design is a time consuming procedure. In order to overcome difficulties for design of the linear controllers, the hybrid recurrent Laguerre-orthogonal-polynomial neural network (NN control system which has online learning ability to respond to the system’s nonlinear and time-varying behaviors is proposed to control PMSM servo-driven V-belt CVT system under the occurrence of the lumped nonlinear load disturbances. The hybrid recurrent Laguerre-orthogonal-polynomial NN control system consists of an inspector control, a recurrent Laguerre-orthogonal-polynomial NN control with adaptive law, and a recouped control with estimated law. Moreover, the adaptive law of online parameters in the recurrent Laguerre-orthogonal-polynomial NN is derived using the Lyapunov stability theorem. Furthermore, the optimal learning rate of the parameters by means of modified particle swarm optimization (PSO is proposed to achieve fast convergence. Finally, to show the effectiveness of the proposed control scheme, comparative studies are demonstrated by experimental results.
Deformation of the three-term recursion relation and generation of new orthogonal polynomials
International Nuclear Information System (INIS)
Alhaidari, A D
2002-01-01
We find solutions for a linear deformation of the three-term recursion relation. The orthogonal polynomials of the first and second kind associated with the deformed relation are obtained. The new density (weight) function is written in terms of the original one and the deformation parameters
Directory of Open Access Journals (Sweden)
Yi Liu
2015-01-01
Full Text Available The design and simulation of a 10 × 8 multibeam dual-band orthogonal linearly polarized antenna array operating at Ku-band are presented for transmit-receive applications. By using patches with different coupling methods as elements, both perpendicular polarization in 12.25–12.75 GHz band and horizontal polarization in 14.0–14.5 GHz band are realized in a shared antenna aperture. A microstrip Rotman lens is employed as the beamforming network with 7 input ports, which can generate a corresponding number of beams to cover −30°–30° with 5 dB beamwidth along one dimension. This type of multibeam orthogonal linearly polarized planar antenna is a good candidate for satellite communication (SatCom.
Energy Technology Data Exchange (ETDEWEB)
Fang, L. [LMP, Ecole Centrale de Pékin, Beihang University, Beijing 100191 (China); Co-Innovation Center for Advanced Aero-Engine, Beihang University, Beijing 100191 (China); Sun, X.Y. [LMP, Ecole Centrale de Pékin, Beihang University, Beijing 100191 (China); Liu, Y.W., E-mail: liuyangwei@126.com [National Key Laboratory of Science and Technology on Aero-Engine Aero-Thermodynamics, School of Energy and Power Engineering, Beihang University, Beijing 100191 (China); Co-Innovation Center for Advanced Aero-Engine, Beihang University, Beijing 100191 (China)
2016-12-09
In order to shed light on understanding the subgrid-scale (SGS) modelling methodology, we analyze and define the concepts of assumption and restriction in the modelling procedure, then show by a generalized derivation that if there are multiple stationary restrictions in a modelling, the corresponding assumption function must satisfy a criterion of orthogonality. Numerical tests using one-dimensional nonlinear advection equation are performed to validate this criterion. This study is expected to inspire future research on generally guiding the SGS modelling methodology. - Highlights: • The concepts of assumption and restriction in the SGS modelling procedure are defined. • A criterion of orthogonality on the assumption and restrictions is derived. • Numerical tests using one-dimensional nonlinear advection equation are performed to validate this criterion.
Generation of a strong attosecond pulse train with an orthogonally polarized two-color laser field
International Nuclear Information System (INIS)
Kim, Chul Min; Kim, I Jong; Nam, Chang Hee
2005-01-01
We theoretically investigate the high-order harmonic generation from a neon atom irradiated by an intense two-color femtosecond laser pulse, in which the fundamental field and its second harmonic are linearly polarized and orthogonal to each other. In contrast to usual high-harmonic generation with linearly polarized fundamental field alone, a very strong and clean high-harmonic spectrum, consisting of both odd and even orders of harmonics, can be generated in the orthogonally polarized two-color laser field with proper selection of the relative phase between the fundamental and second-harmonic fields. In time domain, this results in a strong and regular attosecond pulse train. The origin of these behaviors is elucidated by analyzing semiclassical electron paths and by simulating high-harmonic generation quantum mechanically
Orthogonal rational functions on the unit circle: from the scalar to the matrix case.
Bultheel, A.; Gonzalez-Vera, P.; Hendriksen, E.; Njastad, O.
2006-01-01
Special functions and orthogonal polynomials in particular have been around for centuries. Can you imagine mathematics without trigonometric functions, the exponential function or polynomials? In the twentieth century the emphasis was on special functions satisfying linear differential equations,
A device for identification of respective images in orthogonal localization roentgenograms
International Nuclear Information System (INIS)
Ganchev, M.
1977-01-01
Some problems which might be solved with the device, originally intended for localization of implanted radioactive wires, include: conjugation check-up of orthogonal localization roentgenograms; localization of partially screened radioactive sources in the patient body; localization of Fletcher's trapezium points in the pelvis; identification of the respective images of contrast filled lymph nodes and localization of some bone hallmarks, visible only on one of two localization roentgenograms. (author)
Darboux partners of pseudoscalar Dirac potentials associated with exceptional orthogonal polynomials
International Nuclear Information System (INIS)
Schulze-Halberg, Axel; Roy, Barnana
2014-01-01
We introduce a method for constructing Darboux (or supersymmetric) pairs of pseudoscalar and scalar Dirac potentials that are associated with exceptional orthogonal polynomials. Properties of the transformed potentials and regularity conditions are discussed. As an application, we consider a pseudoscalar Dirac potential related to the Schrödinger model for the rationally extended radial oscillator. The pseudoscalar partner potentials are constructed under the first- and second-order Darboux transformations
Darboux partners of pseudoscalar Dirac potentials associated with exceptional orthogonal polynomials
Energy Technology Data Exchange (ETDEWEB)
Schulze-Halberg, Axel, E-mail: xbataxel@gmail.com [Department of Mathematics and Actuarial Science, Indiana University Northwest, 3400 Broadway, Gary, IN 46408 (United States); Department of Physics, Indiana University Northwest, 3400 Broadway, Gary, IN 46408 (United States); Roy, Barnana, E-mail: barnana@isical.ac.in [Physics and Applied Mathematics Unit, Indian Statistical Institute, Kolkata 700108 (India)
2014-10-15
We introduce a method for constructing Darboux (or supersymmetric) pairs of pseudoscalar and scalar Dirac potentials that are associated with exceptional orthogonal polynomials. Properties of the transformed potentials and regularity conditions are discussed. As an application, we consider a pseudoscalar Dirac potential related to the Schrödinger model for the rationally extended radial oscillator. The pseudoscalar partner potentials are constructed under the first- and second-order Darboux transformations.
Orthogonal linear polarization tunable-beat ring laser with a superluminescent diode
Energy Technology Data Exchange (ETDEWEB)
Takahashi, Y.; Yoshino, T. [Department of Electronic Engineering, Faculty of Engineering, Gunma University, 1-5-1 Tenjin-cho, Kiryu, Gunma 376 (Japan)
1997-09-01
An orthogonal linear polarization operated ring laser with a superluminescent diode has been demonstrated to generate a tunable optical beat signal. The ring cavity contains a superluminescent diode as the optical gain medium, Faraday rotators, and a variable phase retarder (Babinet-Soleil compensator). By controlling the retarder, we changed the beat frequency in the range from a few tens of megahertz to 100 MHz. {copyright} 1997 Optical Society of America
Liu, Xiaonan; Ma, Jialiang; Xu, Shiming; Wang, Bin
2017-08-01
Regional ocean models usually utilize orthogonal curvilinear grids that are fit to the coastline of the modeled regions. While the orthogonality of the grid is required from the perspective of the numerical algorithms, the alignment to the irregular coastlines improves the characterization of the land-sea distribution and the ocean simulation. In this article, we carry out fractal analysis of two representative coastal regions and discuss the trade-offs between the orthogonality and coastline alignment during the grid generation of these regions. A new grid generation method based on Schwarz-Christoffel conformal mappings is proposed, with automatic coastal boundary retrieval algorithm that generates resolution dependent boundary for grid generation and alleviates the human efforts involved in traditional methods. We show that for the southeastern Pacific region, the coastline is smooth with low fractal dimension and there exists effective trade-off with a coastline boundary that adjusts to the desired grid resolution. On the contrary, there is no effective trade-off for southeast China seas where the coastline is of higher fractal dimension, and a coarser coastline boundary is recommended for better orthogonality with little loss in coastline alignment. Further numerical study of coastal trapped Kelvin waves for the typical regions demonstrate that the new coastline-fitting grids achieve smaller error in numerical dispersion and higher accuracy. Through analysis, we conclude that for grid generation for regional ocean modeling, modelers should bring into consideration of the multi-scale fractal characteristics of the coastline.
The profile of attention differs between locations orthogonal to and in line with reach direction.
Stewart, Emma E M; Ma-Wyatt, Anna
2017-11-01
People make movements in a variety of directions when interacting with the world around them. It has been well documented that attention shifts to the goal of an upcoming movement, whether the movement is a saccade or a reach. However, recent evidence suggests that the direction of a movement may influence the spatial spread of attention (Stewart & Ma-Wyatt, 2015, Journal of Vision, 15(5), 10). We investigated whether the spatiotemporal profile of attention differs depending on where that location is situated relative to the direction of movement, and if this pattern is consistent across different movement effectors. We compared attentional facilitation at locations in line with or orthogonal to the movement, for reach-only, reach-plus-saccade, and saccade-only conditions. Results show that the spatiotemporal profile of attention differs across different movement combinations, and is also different at target locations orthogonal to and in line with the movement direction. Specifically, when a reach alone was made, there was a general decrease in attention at all locations during the movement and a general increase in attention at all locations with a saccade only. However, the concurrent reach and saccade condition showed a premovement attentional facilitation at locations orthogonal to movement direction, but not those in line with the movement direction. These results suggest attentional guidance may be more important at differing time points, depending on the type of movement.
Babaee, Hessam; Choi, Minseok; Sapsis, Themistoklis P.; Karniadakis, George Em
2017-09-01
We develop a new robust methodology for the stochastic Navier-Stokes equations based on the dynamically-orthogonal (DO) and bi-orthogonal (BO) methods [1-3]. Both approaches are variants of a generalized Karhunen-Loève (KL) expansion in which both the stochastic coefficients and the spatial basis evolve according to system dynamics, hence, capturing the low-dimensional structure of the solution. The DO and BO formulations are mathematically equivalent [3], but they exhibit computationally complimentary properties. Specifically, the BO formulation may fail due to crossing of the eigenvalues of the covariance matrix, while both BO and DO become unstable when there is a high condition number of the covariance matrix or zero eigenvalues. To this end, we combine the two methods into a robust hybrid framework and in addition we employ a pseudo-inverse technique to invert the covariance matrix. The robustness of the proposed method stems from addressing the following issues in the DO/BO formulation: (i) eigenvalue crossing: we resolve the issue of eigenvalue crossing in the BO formulation by switching to the DO near eigenvalue crossing using the equivalence theorem and switching back to BO when the distance between eigenvalues is larger than a threshold value; (ii) ill-conditioned covariance matrix: we utilize a pseudo-inverse strategy to invert the covariance matrix; (iii) adaptivity: we utilize an adaptive strategy to add/remove modes to resolve the covariance matrix up to a threshold value. In particular, we introduce a soft-threshold criterion to allow the system to adapt to the newly added/removed mode and therefore avoid repetitive and unnecessary mode addition/removal. When the total variance approaches zero, we show that the DO/BO formulation becomes equivalent to the evolution equation of the Optimally Time-Dependent modes [4]. We demonstrate the capability of the proposed methodology with several numerical examples, namely (i) stochastic Burgers equation: we
pyRMSD: a Python package for efficient pairwise RMSD matrix calculation and handling.
Gil, Víctor A; Guallar, Víctor
2013-09-15
We introduce pyRMSD, an open source standalone Python package that aims at offering an integrative and efficient way of performing Root Mean Square Deviation (RMSD)-related calculations of large sets of structures. It is specially tuned to do fast collective RMSD calculations, as pairwise RMSD matrices, implementing up to three well-known superposition algorithms. pyRMSD provides its own symmetric distance matrix class that, besides the fact that it can be used as a regular matrix, helps to save memory and increases memory access speed. This last feature can dramatically improve the overall performance of any Python algorithm using it. In addition, its extensibility, testing suites and documentation make it a good choice to those in need of a workbench for developing or testing new algorithms. The source code (under MIT license), installer, test suites and benchmarks can be found at https://pele.bsc.es/ under the tools section. victor.guallar@bsc.es Supplementary data are available at Bioinformatics online.
The pairwise phase consistency in cortical network and its relationship with neuronal activation
Directory of Open Access Journals (Sweden)
Wang Daming
2017-01-01
Full Text Available Gamma-band neuronal oscillation and synchronization with the range of 30-90 Hz are ubiquitous phenomenon across numerous brain areas and various species, and correlated with plenty of cognitive functions. The phase of the oscillation, as one aspect of CTC (Communication through Coherence hypothesis, underlies various functions for feature coding, memory processing and behaviour performing. The PPC (Pairwise Phase Consistency, an improved coherence measure, statistically quantifies the strength of phase synchronization. In order to evaluate the PPC and its relationships with input stimulus, neuronal activation and firing rate, a simplified spiking neuronal network is constructed to simulate orientation columns in primary visual cortex. If the input orientation stimulus is preferred for a certain orientation column, neurons within this corresponding column will obtain higher firing rate and stronger neuronal activation, which consequently engender higher PPC values, with higher PPC corresponding to higher firing rate. In addition, we investigate the PPC in time resolved analysis with a sliding window.
Source localization using recursively applied and projected (RAP) MUSIC
Energy Technology Data Exchange (ETDEWEB)
Mosher, J.C. [Los Alamos National Lab., NM (United States); Leahy, R.M. [Univ. of Southern California, Los Angeles, CA (United States). Signal and Image Processing Inst.
1998-03-01
A new method for source localization is described that is based on a modification of the well known multiple signal classification (MUSIC) algorithm. In classical MUSIC, the array manifold vector is projected onto an estimate of the signal subspace, but errors in the estimate can make location of multiple sources difficult. Recursively applied and projected (RAP) MUSIC uses each successively located source to form an intermediate array gain matrix, and projects both the array manifold and the signal subspace estimate into its orthogonal complement. The MUSIC projection is then performed in this reduced subspace. Using the metric of principal angles, the authors describe a general form of the RAP-MUSIC algorithm for the case of diversely polarized sources. Through a uniform linear array simulation, the authors demonstrate the improved Monte Carlo performance of RAP-MUSIC relative to MUSIC and two other sequential subspace methods, S and IES-MUSIC.
Directory of Open Access Journals (Sweden)
Vladimir A. Batura
2014-11-01
Full Text Available The efficiency of orthogonal transformations application in the frequency algorithms of the digital watermarking of still images is examined. Discrete Hadamard transform, discrete cosine transform and discrete Haar transform are selected. Their effectiveness is determined by the invisibility of embedded in digital image watermark and its resistance to the most common image processing operations: JPEG-compression, noising, changing of the brightness and image size, histogram equalization. The algorithm for digital watermarking and its embedding parameters remain unchanged at these orthogonal transformations. Imperceptibility of embedding is defined by the peak signal to noise ratio, watermark stability– by Pearson's correlation coefficient. Embedding is considered to be invisible, if the value of the peak signal to noise ratio is not less than 43 dB. Embedded watermark is considered to be resistant to a specific attack, if the Pearson’s correlation coefficient is not less than 0.5. Elham algorithm based on the image entropy is chosen for computing experiment. Computing experiment is carried out according to the following algorithm: embedding of a digital watermark in low-frequency area of the image (container by Elham algorithm, exposure to a harmful influence on the protected image (cover image, extraction of a digital watermark. These actions are followed by quality assessment of cover image and watermark on the basis of which efficiency of orthogonal transformation is defined. As a result of computing experiment it was determined that the choice of the specified orthogonal transformations at identical algorithm and parameters of embedding doesn't influence the degree of imperceptibility for a watermark. Efficiency of discrete Hadamard transform and discrete cosine transformation in relation to the attacks chosen for experiment was established based on the correlation indicators. Application of discrete Hadamard transform increases
International Nuclear Information System (INIS)
Yin Fangfang; Guan Huaiqun; Lu Wenkai
2005-01-01
The technologies with kilovoltage (kV) and megavoltage (MV) imaging in the treatment room are now available for image-guided radiation therapy to improve patient setup and target localization accuracy. However, development of strategies to efficiently and effectively implement these technologies for patient treatment remains challenging. This study proposed an aggregated technique for on-board CT reconstruction using combination of kV and MV beam projections to improve the data acquisition efficiency and image quality. These projections were acquired in the treatment room at the patient treatment position with a new kV imaging device installed on the accelerator gantry, orthogonal to the existing MV portal imaging device. The projection images for a head phantom and a contrast phantom were acquired using both the On-Board Imager TM kV imaging device and the MV portal imager mounted orthogonally on the gantry of a Varian Clinac TM 21EX linear accelerator. MV projections were converted into kV information prior to the aggregated CT reconstruction. The multilevel scheme algebraic-reconstruction technique was used to reconstruct CT images involving either full, truncated, or a combination of both full and truncated projections. An adaptive reconstruction method was also applied, based on the limited numbers of kV projections and truncated MV projections, to enhance the anatomical information around the treatment volume and to minimize the radiation dose. The effects of the total number of projections, the combination of kV and MV projections, and the beam truncation of MV projections on the details of reconstructed kV/MV CT images were also investigated
Lu, Zhao; Sun, Jing; Butts, Kenneth
2014-05-01
Support vector regression for approximating nonlinear dynamic systems is more delicate than the approximation of indicator functions in support vector classification, particularly for systems that involve multitudes of time scales in their sampled data. The kernel used for support vector learning determines the class of functions from which a support vector machine can draw its solution, and the choice of kernel significantly influences the performance of a support vector machine. In this paper, to bridge the gap between wavelet multiresolution analysis and kernel learning, the closed-form orthogonal wavelet is exploited to construct new multiscale asymmetric orthogonal wavelet kernels for linear programming support vector learning. The closed-form multiscale orthogonal wavelet kernel provides a systematic framework to implement multiscale kernel learning via dyadic dilations and also enables us to represent complex nonlinear dynamics effectively. To demonstrate the superiority of the proposed multiscale wavelet kernel in identifying complex nonlinear dynamic systems, two case studies are presented that aim at building parallel models on benchmark datasets. The development of parallel models that address the long-term/mid-term prediction issue is more intricate and challenging than the identification of series-parallel models where only one-step ahead prediction is required. Simulation results illustrate the effectiveness of the proposed multiscale kernel learning.
Directory of Open Access Journals (Sweden)
F. A. Romaniuk
2012-01-01
Full Text Available The paper considers formers of orthogonal components of the first, second and fifth current harmonics. The formers are made on the basis of the Goertzel algorithm. The paper also contains investigations of frequency and dynamic properties of these formers.
Terstappen, Leonardus Wendelinus Mathias Marie; de Grooth, B.G.; ten Napel, C.H.H.; van Berkel, W.; Greve, Jan
1986-01-01
Light scattering properties of human lymphocyte subpopulations selected by immunofluorescence were studied with a flow cytometer. Regulatory and B-lymphocytes showed a low orthogonal light scatter signal, whereas cytotoxic lymphocytes identified with leu-7, leu-11 and leu-15 revealed a large
Tucker, Murray G; Kavanagh, Justin J; Morrison, Steven; Barrett, Rod S
2009-10-01
Falls amongst older people have been linked to reduced postural stability and slowed movement responses. The objective of this study was to examine differences in postural stability and the speed of response between young adults, low fall-risk older adults, and high fall-risk older adults during voluntary postural sway movements. Twenty-five young adults (25+/-4 years), and 32 low fall-risk (74+/-5 years), and 16 high fall-risk (79+/-7 years) older adults performed voluntary sway and rapid orthogonal transitions of voluntary sway between the anterior-posterior and medial-lateral directions. Measures included reaction and movement time and the amplitudes of the centre of pressure, centre of mass, and the separation distance between the centre of pressure and centre of mass. Both fall-risk groups compared to the young had slower reaction and movement time, greater centre of pressure and/or centre of mass amplitude in the orthogonal (non-target) direction during voluntary sway, and reduced anterior-posterior and medial-lateral separation between the centre of pressure and centre of mass during voluntary sway and orthogonal transitions. High compared to low fall-risk individuals had slower reaction and movement time, increased non-target centre of mass amplitude during voluntary sway, and reduced medial-lateral centre of pressure and centre of mass separation during voluntary sway and orthogonal transitions. Age-related deterioration of postural control resulted in slower reactive responses and reduced control of the direction of body movement during voluntary sway and orthogonal transitions. Slower postural reaction and movement time and reduced medial-lateral control of the centre of mass during voluntary sway movements are associated with increased fall-risk in community-living older people.
Gerrard, Simon R.; Hardiman, Claire; Shelbourne, Montserrat; Nandhakumar, Iris; Nordé n, Bengt; Brown, Tom
2012-01-01
chemistry for the synthesis of dimeric, trimeric, and oligomeric modular DNA scaffolds from cyclic, double-stranded, 80-mer DNA nanoconstructs. This particular combination of orthogonal click reactions was more effective for nanoassembly than others explored
A direct method for the synthesis of orthogonally protected furyl- and thienyl- amino acids.
Hudson, Alex S; Caron, Laurent; Colgin, Neil; Cobb, Steven L
2015-04-01
The synthesis of unnatural amino acids plays a key part in expanding the potential application of peptide-based drugs and in the total synthesis of peptide natural products. Herein, we report a direct method for the synthesis of orthogonally protected 5-membered heteroaromatic amino acids.
Introduction to orthogonal, symplectic and unitary representations of finite groups
Riehm, Carl R
2011-01-01
Orthogonal, symplectic and unitary representations of finite groups lie at the crossroads of two more traditional subjects of mathematics-linear representations of finite groups, and the theory of quadratic, skew symmetric and Hermitian forms-and thus inherit some of the characteristics of both. This book is written as an introduction to the subject and not as an encyclopaedic reference text. The principal goal is an exposition of the known results on the equivalence theory, and related matters such as the Witt and Witt-Grothendieck groups, over the "classical" fields-algebraically closed, rea
van den Oever, Huub L. A.; Dzoljic, Misa; Ince, Can; Hollmann, Markus W.; Mokken, Fleur C.
2006-01-01
We used Orthogonal Polarization Spectral Imaging to examine the microcirculation of the vaginal mucosa in nine anesthetized patients during two consecutive anesthetic interventions: hypervolemic hemodilution using hydroxyethyl starch followed by thoracic epidural lidocaine. Images taken before and
Orthogonal wave propagation of epileptiform activity in the planar mouse hippocampus in vitro.
Kibler, Andrew B; Durand, Dominique M
2011-09-01
In vitro brain preparations have been used extensively to study the generation and propagation of epileptiform activity. Transverse and longitudinal slices of the rodent hippocampus have revealed various patterns of propagation. Yet intact connections between the transverse and longitudinal pathways should generate orthogonal (both transverse and longitudinal) propagation of seizures involving the entire hippocampus. This study utilizes the planar unfolded mouse hippocampus preparation to reveal simultaneous orthogonal epileptiform propagation and to test a method of arresting propagation. This study utilized an unfolded mouse hippocampus preparation. It was chosen due to its preservation of longitudinal neuronal processes, which are thought to play an important role in epileptiform hyperexcitability. 4-Aminopyridine (4-AP), microelectrodes, and voltage-sensitive dye imaging were employed to investigate tissue excitability. In 50-μm 4-AP, stimulation of the stratum radiatum induced transverse activation of CA3 cells but also induced a longitudinal wave of activity propagating along the CA3 region at a speed of 0.09 m/s. Without stimulation, a wave originated at the temporal CA3 and propagated in a temporal-septal direction could be suppressed with glutamatergic receptor antagonists. Orthogonal propagation traveled longitudinally along the CA3 pathway, secondarily invading the CA1 region at a velocity of 0.22 ± 0.024 m/s. Moreover, a local lesion restricted to the CA3 region could arrest wave propagation. These results reveal a complex two-dimensional epileptiform wave propagation pattern in the hippocampus that is generated by a combination of synaptic transmission and axonal propagation in the CA3 recurrent network. Epileptiform propagation block via a transverse selective CA3 lesion suggests a potential surgical technique for the treatment of temporal lobe epilepsy. Wiley Periodicals, Inc. © 2011 International League Against Epilepsy.
Visualization of pairwise and multilocus linkage disequilibrium structure using latent forests.
Directory of Open Access Journals (Sweden)
Raphaël Mourad
Full Text Available Linkage disequilibrium study represents a major issue in statistical genetics as it plays a fundamental role in gene mapping and helps us to learn more about human history. The linkage disequilibrium complex structure makes its exploratory data analysis essential yet challenging. Visualization methods, such as the triangular heat map implemented in Haploview, provide simple and useful tools to help understand complex genetic patterns, but remain insufficient to fully describe them. Probabilistic graphical models have been widely recognized as a powerful formalism allowing a concise and accurate modeling of dependences between variables. In this paper, we propose a method for short-range, long-range and chromosome-wide linkage disequilibrium visualization using forests of hierarchical latent class models. Thanks to its hierarchical nature, our method is shown to provide a compact view of both pairwise and multilocus linkage disequilibrium spatial structures for the geneticist. Besides, a multilocus linkage disequilibrium measure has been designed to evaluate linkage disequilibrium in hierarchy clusters. To learn the proposed model, a new scalable algorithm is presented. It constrains the dependence scope, relying on physical positions, and is able to deal with more than one hundred thousand single nucleotide polymorphisms. The proposed algorithm is fast and does not require phase genotypic data.
ORIENTATION FIELD RECONSTRUCTION OF ALTERED FINGERPRINT USING ORTHOGONAL WAVELETS
Directory of Open Access Journals (Sweden)
Mini M.G.
2016-11-01
Full Text Available Ridge orientation field is an important feature for fingerprint matching and fingerprint reconstruction. Matching of the altered fingerprint against its unaltered mates can be done by extracting the available features in the altered fingerprint and using it along with approximated ridge orientation. This paper presents a method for approximating ridge orientation field of altered fingerprints. In the proposed method, sine and cosine of doubled orientation of the fingerprint is decomposed using orthogonal wavelets and reconstructed back using only the approximation coefficients. No prior information about the singular points is needed for orientation approximation. The method is found suitable for orientation estimation of low quality fingerprint images also.
Directory of Open Access Journals (Sweden)
Lingyang Song
2007-04-01
Full Text Available We report a simple differential modulation scheme for quasi-orthogonal space-time block codes. A new class of quasi-orthogonal coding structures that can provide partial transmit diversity is presented for various numbers of transmit antennas. Differential encoding and decoding can be simplified for differential Alamouti-like codes by grouping the signals in the transmitted matrix and decoupling the detection of data symbols, respectively. The new scheme can achieve constant amplitude of transmitted signals, and avoid signal constellation expansion; in addition it has a linear signal detector with very low complexity. Simulation results show that these partial-diversity codes can provide very useful results at low SNR for current communication systems. Extension to more than four transmit antennas is also considered.
Improved MIMO radar GMTI via cyclic-shift transmission of orthogonal frequency division signals
Li, Fuyou; He, Feng; Dong, Zhen; Wu, Manqing
2018-05-01
Minimum detectable velocity (MDV) and maximum detectable velocity are both important in ground moving target indication (GMTI) systems. Smaller MDV can be achieved by longer baseline via multiple-input multiple-output (MIMO) radar. Maximum detectable velocity is decided by blind velocities associated with carrier frequencies, and blind velocities can be mitigated by orthogonal frequency division signals. However, the scattering echoes from different carrier frequencies are independent, which is not good for improving MDV performance. An improved cyclic-shift transmission is applied in MIMO GMTI system in this paper. MDV performance is improved due to the longer baseline, and maximum detectable velocity performance is improved due to the mitigation of blind velocities via multiple carrier frequencies. The signal model for this mode is established, the principle of mitigating blind velocities with orthogonal frequency division signals is presented; the performance of different MIMO GMTI waveforms is analysed; and the performance of different array configurations is analysed. Simulation results by space-time-frequency adaptive processing proves that our proposed method is a valid way to improve GMTI performance.
Spatial dual-orthogonal (SDO) phase-shifting algorithm by pre-recomposing the interference fringe.
Wang, Yi; Li, Bingbo; Zhong, Liyun; Tian, Jindong; Lu, Xiaoxu
2017-07-24
In the case that the phase distribution of interferogram is nonuniform and the background/modulation amplitude change rapidly, the current self-calibration algorithms with better performance like principal components analysis (PCA) and advanced iterative algorithm (AIA) cannot work well. In this study, from three or more phase-shifting interferograms with unknown phase-shifts, we propose a spatial dual-orthogonal (SDO) phase-shifting algorithm with high accuracy through using the spatial orthogonal property of interference fringe, in which a new sequence of fringe patterns with uniform phase distribution can be constructed by pre-recomposing original interferograms to determine their corresponding optimum combination coefficients, which are directly related with the phase shifts. Both simulation and experimental results show that using the proposed SDO algorithm, we can achieve accurate phase from the phase-shifting interferograms with nonuniform phase distribution, non-constant background and arbitrary phase shifts. Specially, it is found that the accuracy of phase retrieval with the proposed SDO algorithm is insensitive to the variation of fringe pattern, and this will supply a guarantee for high accuracy phase measurement and application.
An ACE-based Nonlinear Extension to Traditional Empirical Orthogonal Function Analysis
DEFF Research Database (Denmark)
Hilger, Klaus Baggesen; Nielsen, Allan Aasbjerg; Andersen, Ole
2001-01-01
This paper shows the application of the empirical orthogonal unctions/principal component transformation on global sea surface height and temperature data from 1996 and 1997. A nonlinear correlation analysis of the transformed data is proposed and performed by applying the alternating conditional...... expectations algorithm. New canonical variates are found that indicate that the highest correlation between ocean temperature and height is associated with the build-up of the El Niño during the last half of 1997....
Dong, Shuo; Kettenbach, Joachim; Hinterleitner, Isabella; Bergmann, Helmar; Birkfellner, Wolfgang
2008-01-01
Current merit functions for 2D/3D registration usually rely on comparing pixels or small regions of images using some sort of statistical measure. Problems connected to this paradigm the sometimes problematic behaviour of the method if noise or artefacts (for instance a guide wire) are present on the projective image. We present a merit function for 2D/3D registration which utilizes the decomposition of the X-ray and the DRR under comparison into orthogonal Zernike moments; the quality of the match is assessed by an iterative comparison of expansion coefficients. Results in a imaging study on a physical phantom show that--compared to standard cross--correlation the Zernike moment based merit function shows better robustness if histogram content in images under comparison is different, and that time expenses are comparable if the merit function is constructed out of a few significant moments only.
Higher spin currents in orthogonal Wolf space
International Nuclear Information System (INIS)
Ahn, Changhyun; Paeng, Jinsub
2015-01-01
For the N=4 superconformal coset theory by ((SO(N+4))/(SO(N)×SU(2)))×U(1) (that contains an orthogonal Wolf space) with N = 4, the N=2 WZW affine current algebra is obtained. The 16 generators (or 11 generators) of the large N=4 linear (or nonlinear) superconformal algebra are described by these WZW affine currents explicitly. Along the line of large N=4 holography, the extra 16 currents with spins (2,(5/2),(5/2),3), ((5/2),3,3,(7/2)), ((5/2),3,3,(7/2)), and (3,(7/2),(7/2),4) are obtained in terms of the WZW affine currents. The lowest spin of this N=4 multiplet is two rather than one, which is for a unitary Wolf space. The operator product expansions between the above 11 currents and these extra 16 higher spin currents are found explicitly. (paper)
Dynamical pairwise entanglement and two-point correlations in the three-ligand spin-star structure
Motamedifar, M.
2017-10-01
We consider the three-ligand spin-star structure through homogeneous Heisenberg interactions (XXX-3LSSS) in the framework of dynamical pairwise entanglement. It is shown that the time evolution of the central qubit ;one-particle; state (COPS) brings about the generation of quantum W states at periodical time instants. On the contrary, W states cannot be generated from the time evolution of a ligand ;one-particle; state (LOPS). We also investigate the dynamical behavior of two-point quantum correlations as well as the expectation values of the different spin-components for each element in the XXX-3LSSS. It is found that when a W state is generated, the same value of the concurrence between any two arbitrary qubits arises from the xx and yy two-point quantum correlations. On the opposite, zz quantum correlation between any two qubits vanishes at these time instants.
Cosine and sine operators related to orthogonal polynomial sets on the interval [-1, 1
International Nuclear Information System (INIS)
Appl, Thomas; Schiller, Diethard H
2005-01-01
The quantization of phase is still an open problem. In the approach of Susskind and Glogower, the so-called cosine and sine operators play a fundamental role. Their eigenstates in the Fock representation are related to the Chebyshev polynomials of the second kind. Here we introduce more general cosine and sine operators whose eigenfunctions in the Fock basis are related in a similar way to arbitrary orthogonal polynomial sets on the interval [-1, 1]. To each polynomial set defined in terms of a weight function there corresponds a pair of cosine and sine operators. Depending on the symmetry of the weight function, we distinguish generalized or extended operators. Their eigenstates are used to define cosine and sine representations and probability distributions. We also consider the arccosine and arcsine operators and use their eigenstates to define cosine-phase and sine-phase distributions, respectively. Specific, numerical and graphical results are given for the classical orthogonal polynomials and for particular Fock and coherent states
On the non-existence of orthogonal instanton bundles on P^{2n+1}
Directory of Open Access Journals (Sweden)
Łucja Farnik
2009-11-01
Full Text Available In this paper we prove that there do not exist orthogonal instanton bundles on P^{2n+1} . In order to demonstrate this fact, we propose a new way of representing the invariant, introduced by L. Costa and G. Ottaviani, related to a rank 2n instanton bundle on P^{2n+1}.
Best polynomial degree reduction on q-lattices with applications to q-orthogonal polynomials
Ait-Haddou, Rachid
2015-06-07
We show that a weighted least squares approximation of q-Bézier coefficients provides the best polynomial degree reduction in the q-L2-norm. We also provide a finite analogue of this result with respect to finite q-lattices and we present applications of these results to q-orthogonal polynomials. © 2015 Elsevier Inc. All rights reserved.
Best polynomial degree reduction on q-lattices with applications to q-orthogonal polynomials
Ait-Haddou, Rachid; Goldman, Ron
2015-01-01
We show that a weighted least squares approximation of q-Bézier coefficients provides the best polynomial degree reduction in the q-L2-norm. We also provide a finite analogue of this result with respect to finite q-lattices and we present applications of these results to q-orthogonal polynomials. © 2015 Elsevier Inc. All rights reserved.
Semiconductor of spinons: from Ising band insulator to orthogonal band insulator.
Farajollahpour, T; Jafari, S A
2018-01-10
We use the ionic Hubbard model to study the effects of strong correlations on a two-dimensional semiconductor. The spectral gap in the limit where on-site interactions are zero is set by the staggered ionic potential, while in the strong interaction limit it is set by the Hubbard U. Combining mean field solutions of the slave spin and slave rotor methods, we propose two interesting gapped phases in between: (i) the insulating phase before the Mott phase can be viewed as gapping a non-Fermi liquid state of spinons by the staggered ionic potential. The quasi-particles of underlying spinons are orthogonal to physical electrons, giving rise to the 'ARPES-dark' state where the ARPES gap will be larger than the optical and thermal gap. (ii) The Ising insulator corresponding to ordered phase of the Ising variable is characterized by single-particle excitations whose dispersion is controlled by Ising-like temperature and field dependences. The temperature can be conveniently employed to drive a phase transition between these two insulating phases where Ising exponents become measurable by ARPES and cyclotron resonance. The rare earth monochalcogenide semiconductors where the magneto-resistance is anomalously large can be a candidate system for the Ising band insulator. We argue that the Ising and orthogonal insulating phases require strong enough ionic potential to survive the downward renormalization of the ionic potential caused by Hubbard U.
Semiconductor of spinons: from Ising band insulator to orthogonal band insulator
Farajollahpour, T.; Jafari, S. A.
2018-01-01
We use the ionic Hubbard model to study the effects of strong correlations on a two-dimensional semiconductor. The spectral gap in the limit where on-site interactions are zero is set by the staggered ionic potential, while in the strong interaction limit it is set by the Hubbard U. Combining mean field solutions of the slave spin and slave rotor methods, we propose two interesting gapped phases in between: (i) the insulating phase before the Mott phase can be viewed as gapping a non-Fermi liquid state of spinons by the staggered ionic potential. The quasi-particles of underlying spinons are orthogonal to physical electrons, giving rise to the ‘ARPES-dark’ state where the ARPES gap will be larger than the optical and thermal gap. (ii) The Ising insulator corresponding to ordered phase of the Ising variable is characterized by single-particle excitations whose dispersion is controlled by Ising-like temperature and field dependences. The temperature can be conveniently employed to drive a phase transition between these two insulating phases where Ising exponents become measurable by ARPES and cyclotron resonance. The rare earth monochalcogenide semiconductors where the magneto-resistance is anomalously large can be a candidate system for the Ising band insulator. We argue that the Ising and orthogonal insulating phases require strong enough ionic potential to survive the downward renormalization of the ionic potential caused by Hubbard U.
Permeability test and fuzzy orthogonal analysis of hydrogenated nitrile O-ring
Directory of Open Access Journals (Sweden)
Qin Hu
2015-03-01
Full Text Available In the high temperature, high pressure and high corrosive environment of the oil and gas drilling downhole, the weatherability of rubber sealing material has a great influence on the production safety. In order to study the important degree of every key environmental factor in downhole influencing the sealing performance of rubber sealing material, a new device of simulating downhole environment is designed to test the permeability of O-ring. The sample is hydrogenated nitrile O-ring and orthogonal experiment method is used to do nine tests by getting three levels from temperature, pressure and CO2 volume fraction. Test adopts fuzzy orthogonal method to analyze the main effects and the interaction between two factors, taking tensile strength, diameter variety rate and pH value of indicator as evaluation index. The results show that: the environmental factor influencing the sealing performance of hydrogenated nitrile O-ring from high to low by turns is temperature, pressure and CO2 volume fraction, while the interaction between temperature and pressure is the most significant. It provides a new way to study the influence of downhole complex environment on the performance of rubber sealing material. Moreover, the results have important reference value to further study the failure mechanism of rubber sealing ring in many environmental factors and the rational use in engineering.
Computation of the Likelihood in Biallelic Diffusion Models Using Orthogonal Polynomials
Directory of Open Access Journals (Sweden)
Claus Vogl
2014-11-01
Full Text Available In population genetics, parameters describing forces such as mutation, migration and drift are generally inferred from molecular data. Lately, approximate methods based on simulations and summary statistics have been widely applied for such inference, even though these methods waste information. In contrast, probabilistic methods of inference can be shown to be optimal, if their assumptions are met. In genomic regions where recombination rates are high relative to mutation rates, polymorphic nucleotide sites can be assumed to evolve independently from each other. The distribution of allele frequencies at a large number of such sites has been called “allele-frequency spectrum” or “site-frequency spectrum” (SFS. Conditional on the allelic proportions, the likelihoods of such data can be modeled as binomial. A simple model representing the evolution of allelic proportions is the biallelic mutation-drift or mutation-directional selection-drift diffusion model. With series of orthogonal polynomials, specifically Jacobi and Gegenbauer polynomials, or the related spheroidal wave function, the diffusion equations can be solved efficiently. In the neutral case, the product of the binomial likelihoods with the sum of such polynomials leads to finite series of polynomials, i.e., relatively simple equations, from which the exact likelihoods can be calculated. In this article, the use of orthogonal polynomials for inferring population genetic parameters is investigated.
Parihar, Abhinav; Shukla, Nikhil; Datta, Suman; Raychowdhury, Arijit
2015-02-01
Computing with networks of synchronous oscillators has attracted wide-spread attention as novel materials and device topologies have enabled realization of compact, scalable and low-power coupled oscillatory systems. Of particular interest are compact and low-power relaxation oscillators that have been recently demonstrated using MIT (metal-insulator-transition) devices using properties of correlated oxides. Further the computational capability of pairwise coupled relaxation oscillators has also been shown to outperform traditional Boolean digital logic circuits. This paper presents an analysis of the dynamics and synchronization of a system of two such identical coupled relaxation oscillators implemented with MIT devices. We focus on two implementations of the oscillator: (a) a D-D configuration where complementary MIT devices (D) are connected in series to provide oscillations and (b) a D-R configuration where it is composed of a resistor (R) in series with a voltage-triggered state changing MIT device (D). The MIT device acts like a hysteresis resistor with different resistances in the two different states. The synchronization dynamics of such a system has been analyzed with purely charge based coupling using a resistive (RC) and a capacitive (CC) element in parallel. It is shown that in a D-D configuration symmetric, identical and capacitively coupled relaxation oscillator system synchronizes to an anti-phase locking state, whereas when coupled resistively the system locks in phase. Further, we demonstrate that for certain range of values of RC and CC, a bistable system is possible which can have potential applications in associative computing. In D-R configuration, we demonstrate the existence of rich dynamics including non-monotonic flows and complex phase relationship governed by the ratios of the coupling impedance. Finally, the developed theoretical formulations have been shown to explain experimentally measured waveforms of such pairwise coupled
Invisibility cloak with image projection capability.
Banerjee, Debasish; Ji, Chengang; Iizuka, Hideo
2016-12-13
Investigations of invisibility cloaks have been led by rigorous theories and such cloak structures, in general, require extreme material parameters. Consequently, it is challenging to realize them, particularly in the full visible region. Due to the insensitivity of human eyes to the polarization and phase of light, cloaking a large object in the full visible region has been recently realized by a simplified theory. Here, we experimentally demonstrate a device concept where a large object can be concealed in a cloak structure and at the same time any images can be projected through it by utilizing a distinctively different approach; the cloaking via one polarization and the image projection via the other orthogonal polarization. Our device structure consists of commercially available optical components such as polarizers and mirrors, and therefore, provides a significant further step towards practical application scenarios such as transparent devices and see-through displays.
National Research Council Canada - National Science Library
Saglam, Halil D
2004-01-01
...) systems utilizing Alamouti-based space-time block coding (STBC) technique. The MIMO communication systems using STBC technique employing both single-carrier modulation and orthogonal frequency division multiplexing (OFDM...
Flow-orthogonal bead oscillation in a microfluidic chip with a magnetic anisotropic flux-guide array
DEFF Research Database (Denmark)
Van Pelt, Stijn; Derks, Roy; Matteucci, Marco
2011-01-01
A new concept for the manipulation of superparamagnetic beads inside a microfluidic chip is presented in this paper. The concept allows for bead actuation orthogonal to the flow direction inside a microchannel. Basic manipulation functionalities were studied by means of finite element simulations...
Prediction of microsleeps using pairwise joint entropy and mutual information between EEG channels.
Baseer, Abdul; Weddell, Stephen J; Jones, Richard D
2017-07-01
Microsleeps are involuntary and brief instances of complete loss of responsiveness, typically of 0.5-15 s duration. They adversely affect performance in extended attention-driven jobs and can be fatal. Our aim was to predict microsleeps from 16 channel EEG signals. Two information theoretic concepts - pairwise joint entropy and mutual information - were independently used to continuously extract features from EEG signals. k-nearest neighbor (kNN) with k = 3 was used to calculate both joint entropy and mutual information. Highly correlated features were discarded and the rest were ranked using Fisher score followed by an average of 3-fold cross-validation area under the curve of the receiver operating characteristic (AUC ROC ). Leave-one-out method (LOOM) was performed to test the performance of microsleep prediction system on independent data. The best prediction for 0.25 s ahead was AUCROC, sensitivity, precision, geometric mean (GM), and φ of 0.93, 0.68, 0.33, 0.75, and 0.38 respectively with joint entropy using single linear discriminant analysis (LDA) classifier.
Downlink scheduling using non-orthogonal uplink beams
Eltayeb, Mohammed E.
2014-04-01
Opportunistic schedulers rely on the feedback of the channel state information of users in order to perform user selection and downlink scheduling. This feedback increases with the number of users, and can lead to inefficient use of network resources and scheduling delays. We tackle the problem of feedback design, and propose a novel class of nonorthogonal codes to feed back channel state information. Users with favorable channel conditions simultaneously transmit their channel state information via non-orthogonal beams to the base station. The proposed formulation allows the base station to identify the strong users via a simple correlation process. After deriving the minimum required code length and closed-form expressions for the feedback load and downlink capacity, we show that i) the proposed algorithm reduces the feedback load while matching the achievable rate of full feedback algorithms operating over a noiseless feedback channel, and ii) the proposed codes are superior to the Gaussian codes.
Downlink scheduling using non-orthogonal uplink beams
Eltayeb, Mohammed E.; Al-Naffouri, Tareq Y.; Bahrami, Hamid Reza Talesh
2014-01-01
Opportunistic schedulers rely on the feedback of the channel state information of users in order to perform user selection and downlink scheduling. This feedback increases with the number of users, and can lead to inefficient use of network resources and scheduling delays. We tackle the problem of feedback design, and propose a novel class of nonorthogonal codes to feed back channel state information. Users with favorable channel conditions simultaneously transmit their channel state information via non-orthogonal beams to the base station. The proposed formulation allows the base station to identify the strong users via a simple correlation process. After deriving the minimum required code length and closed-form expressions for the feedback load and downlink capacity, we show that i) the proposed algorithm reduces the feedback load while matching the achievable rate of full feedback algorithms operating over a noiseless feedback channel, and ii) the proposed codes are superior to the Gaussian codes.
Pickering, William; Lim, Chjan
2017-07-01
We investigate a family of urn models that correspond to one-dimensional random walks with quadratic transition probabilities that have highly diverse applications. Well-known instances of these two-urn models are the Ehrenfest model of molecular diffusion, the voter model of social influence, and the Moran model of population genetics. We also provide a generating function method for diagonalizing the corresponding transition matrix that is valid if and only if the underlying mean density satisfies a linear differential equation and express the eigenvector components as terms of ordinary hypergeometric functions. The nature of the models lead to a natural extension to interaction between agents in a general network topology. We analyze the dynamics on uncorrelated heterogeneous degree sequence networks and relate the convergence times to the moments of the degree sequences for various pairwise interaction mechanisms.
A family of orthogonal polynomials to solve the inverse equation of punctual kinetics
International Nuclear Information System (INIS)
Suescun D, D.; Bonilla L, H. F.; Figueroa J, J. H.
2015-09-01
This paper proposes a new method to reduce fluctuations in the reactivity calculation, a discrete family of orthogonal polynomials that can soften the nuclear power is used, regarded as the set of data needed to calculate the reactivity in a nuclear reactor. The final results show an improvement in the calculation precision of reactivity, compared to some papers presented in the literature. (Author)
Orthogonality-condition model for bound states with a separable expansion of the potential
International Nuclear Information System (INIS)
Pal, K.F.
1984-01-01
A very efficient solution of the equation of Saito's orthogonality-condition model (OCM) is reported for bound states by means of a separable expansion of the potential (PSE method). Some simplifications of the published formulae of the PSE method is derived, which facilitate its application to the OCM and may be useful in solving the Schroedinger equation as well. (author)
Orthogonal Bases used for Feed Forward Control of Wind Turbines
DEFF Research Database (Denmark)
Odgaard, Peter Fogh; Stoustrup, Jakob
2011-01-01
In optimizing wind turbines it can be of a large help to use information of wind speeds at upwind turbine for the control of downwind turbines, it is, however, problematic to use these measurements directly since they are highly inﬂuenced by turbulence behind the wind turbine rotor plane. In this....... In this paper an orthogonal basis is use to extract the general trends in the wind signal, which are forward to the down wind turbines. This concept controller is designed and simulated on a generic 4.8 MW wind turbine model, which shows the potential of this proposed scheme....
Energy Technology Data Exchange (ETDEWEB)
Zhao, L.; Tong, L.S. [Southeast Univ., Nanjing (China). Research Inst. of Electronics; Carter, R.G. [Lancaster Univ. (United Kingdom). Engineering Dept.
1994-09-01
The 3-dimensional finite-difference time-domain method in non-orthogonal co-ordinates (non-standard FDTD) is used to calculate the frequencies of resonators. The numerical boundary conditions of the method are presented. The Influences of boundary conditions and discrete meshes on the numerical accuracy are investigated. The authors present the nonstandard FDTD method using the boundary-orthogonal mesh and equivalent dielectric constant so that the error is reduced from 8.66% to 3.0% for the cylindrical cavity loaded by a dielectric button.
Generation of virtual monochromatic CBCT from dual kV/MV beam projections
International Nuclear Information System (INIS)
Li, Hao; Liu, Bo; Yin, Fang-Fang
2013-01-01
Purpose: To develop a novel on-board imaging technique which allows generation of virtual monochromatic (VM) cone-beam CT (CBCT) with a selected energy from combined kilovoltage (kV)/megavoltage (MV) beam projections. Methods: With the current orthogonal kV/MV imaging hardware equipped in modern linear accelerators, both MV projections (from gantry angle of 0°–100°) and kV projections (90°–200°) were acquired as gantry rotated a total of 110°. A selected range of overlap projections between 90° to 100° were then decomposed into two material projections using experimentally determined parameters from orthogonally stacked aluminum and acrylic step-wedges. Given attenuation coefficients of aluminum and acrylic at a predetermined energy, one set of VM projections could be synthesized from two corresponding sets of decomposed projections. Two linear functions were generated using projection information at overlap angles to convert kV and MV projections at nonoverlap angles to approximate VM projections for CBCT reconstruction. The contrast-to-noise ratios (CNRs) were calculated for different inserts in VM CBCTs of a CatPhan phantom with various selected energies and compared with those in kV and MV CBCTs. The effect of overlap projection number on CNR was evaluated. Additionally, the effect of beam orientation was studied by scanning the CatPhan sandwiched with two 5 cm solid-water phantoms on both lateral sides and an electronic density phantom with two metal bolt inserts. Results: Proper selection of VM energy [30 and 40 keV for low-density polyethylene (LDPE), polymethylpentene, 2 MeV for Delrin] provided comparable or even better CNR results as compared with kV or MV CBCT. An increased number of overlap kV and MV projection demonstrated only marginal improvements of CNR for different inserts (with the exception of LDPE) and therefore one projection overlap was found to be sufficient for the CatPhan study. It was also evident that the optimal CBCT image
Directory of Open Access Journals (Sweden)
Denise Garcia de Santana
2002-06-01
the statistical systems, mainly when a high unbalancing degree is present. Taking that into account, the objective of this work is focused on the study of the estimable functions and of the testable hypotheses in orthogonal and partially orthogonal designs with three factors. For the main effects, in which the generated subspace is individually orthogonal to the inherent subspaces to the other factors, are estimable and, therefore, the corresponding hypothesis is testable in models with no interactions. When interactions are present, the estimable functions present besides the parameters of the factor itself, parameters of the interactions in which the factor is present. In these cases, whether the model contains or not interactions, the hypotheses on weighted averages (type I are equivalent to the hypothesis on proportional averages (type II and, since the complete term is imperative for both full and partial orthogonalities, the equivalence between the hypotheses on non-proportional averages (types III and IV also occurs. The equity between the hypotheses of the types I and II occurs in all interactions, in the orthogonal designs and, in the partially orthogonal designs, it also occurs in the interactions formed by the factors that were not orthogonal between themselves. In these interactions the estimable functions present parameters of the interaction itself, including parameters of the interactions of degree three.
Czech Academy of Sciences Publication Activity Database
Knížek, J.; Tichý, Petr; Beránek, L.; Šindelář, Jan; Vojtěšek, B.; Bouchal, P.; Nenutil, R.; Dedík, O.
2010-01-01
Roč. 7, č. 10 (2010), s. 48-60 ISSN 0974-5718 Grant - others:GA MZd(CZ) NS9812; GA ČR(CZ) GAP304/10/0868 Institutional research plan: CEZ:AV0Z10300504; CEZ:AV0Z10750506 Keywords : polynomial regression * orthogonalization * numerical methods * markers * biomarkers Subject RIV: BA - General Mathematics
Strict optical orthogonal codes for purely asynchronous code-division multiple-access applications
Zhang, Jian-Guo
1996-12-01
Strict optical orthogonal codes are presented for purely asynchronous optical code-division multiple-access (CDMA) applications. The proposed code can strictly guarantee the peaks of its cross-correlation functions and the sidelobes of any of its autocorrelation functions to have a value of 1 in purely asynchronous data communications. The basic theory of the proposed codes is given. An experiment on optical CDMA systems is also demonstrated to verify the characteristics of the proposed code.
Wang, Xiao-liang; Zhang, Yu-jie; Chen, Ming-xia; Wang, Ze-feng
2005-05-01
To optimize extraction technology of the seed of Ziziphus jujuba var. spinosa with the targets of the total saponin, total jujuboside A and B and total flavonoids. In the method of one-way and orthogonal tests, ethanol concentration, amount of ethanol, extraction time and extraction times were the factors in orthogonal test, and each factor with three levels. Ethanol concentration and extraction times had significant effect on all the targets, other factors should be selected in accordance with production practice. The best extraction technology is to extract for three times with 8 fold ethanol solution (60%), and 1.5 h each time.
Directory of Open Access Journals (Sweden)
Hanbing Liu
2016-11-01
Full Text Available Irregularly-shaped bridges are usually adopted to connect the main bridge and ramps in urban overpasses, which are under significant flexion-torsion coupling effects and in complicated stress states. In irregular-shaped bridge design, the parameters such as ramp radius, bifurcation diaphragm stiffness, box girder height, and supporting condition could affect structural performance in different manners. In this paper, the influence of various parameters on three indices, including maximum stress, the stress variation coefficient, and the fundamental frequency of torsional vibration, is investigated and analyzed based on orthogonal test method. Through orthogonal analysis, the major influence parameters and corresponding optimal values for these indices are achieved. Combining with the analytic hierarchy process (AHP, the hierarchical structure model of the multi-indices orthogonal test is established and a comprehensive weight analysis method is proposed to reflect the parameter influence on overall mechanical properties of an irregularly-shaped bridge. Influence order and optimal values of parameters for overall mechanical properties are determined based on the weight of factors and levels calculated by the comprehensive weight analysis method. The results indicate that the comprehensive weight analysis method is superior to the overall balance method, which verifies the effectiveness and accuracy of the comprehensive weight analysis in the parameter optimization of the multi-indices orthogonal test for an irregularly-shaped bridge. Optimal parameters obtained in this paper can provide reference and guidance for parameter control in irregularly-shaped bridge design.
International Nuclear Information System (INIS)
Wang, Hua-Qin; Cheng, Wei-Na; Zhu, Li-Yuan; Hu, Xin-Gen
2016-01-01
Highlights: • Dilution enthalpies of L-carnitine in aqueous alkali halide solutions by ITC. • The second virial coefficients of enthalpy (h_2) have been calculated. • The values of h_2 increase with increasing molalities of aqueous salt solutions. • The signs of h_2 turn from negative in pure water to positive in salt solutions. • The trends is ascribed to the salt effects on pairwise self-associations. - Abstract: Knowledge of the influence of ions of various nature on intermolecular hydrophilic and hydrophobic interactions in solutions is required in many research fields. In this paper, dilution enthalpies of zwitterion L-carnitine in aqueous NaCl, KCl and NaBr solutions of various molalities (b = 0 to 3.0 mol · kg"−"1) have been determined respectively at T = (298.15 ± 0.01) K and p = (0.100 ± 0.005) MPa by isothermal titration calorimetry (ITC). In light of the MacMillan–Mayer theory, the 2nd virial enthalpic coefficients (h_2) have been calculated. The h_2 coefficients increase gradually with increasing molality (b) of the three aqueous alkali halides solutions, from small negative values in pure water to relatively larger positive values in solution. The trends of h_2 coefficients are ascribed to the salt effects on the balance between hydrophilic and hydrophobic interactions in pairwise self-associations. It is considered that the size of cations and anions exert influences on h_2 coefficients through their surface charge densities and hydration (or dehydration) abilities.