WorldWideScience

Sample records for optical proteomic technologies

  1. Proteomics Technologies and Challenges

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    Proteomics is the study of proteins and their interactions in a cell. With the completion of the Human Genome Project, the emphasis is shifting to the protein compliment of the human organism. Because proteome reflects more accurately on the dynamic state of a cell, tissue, or organism, much is expected from proteomics to yield better disease markers for diagnosis and therapy monitoring. The advent of proteomics technologies for global detection and quantitation of proteins creates new opportunities and challenges for those seeking to gain greater understanding of diseases. High-throughput proteomics technologies combining with advanced bioinformatics are extensively used to identify molecular signatures of diseases based on protein pathways and signaling cascades. Mass spectrometry plays a vital role in proteomics and has become an indispensable tool for molecular and cellular biology. While the potential is great, many challenges and issues remain to be solved, such as mining low abundant proteins and integration of proteomics with genomics and metabolomics data. Nevertheless, proteomics is the foundation for constructing and extracting useful knowledge to biomedical research. In this review, a snapshot of contemporary issues in proteomics technologies is discussed.

  2. Proteomics: technology development and applications.

    Science.gov (United States)

    Walton, S Patrick; Jayaraman, Arul

    2009-02-01

    Technology development in, and the application of, proteomics are emerging areas among chemical engineers and others who presented at the 2008 American Institute of Chemical Engineers (AIChE) Annual Meeting. Overall, the centennial meeting offered a broad current perspective on the discipline of chemical engineering as it enters its second century. Biomedical and biochemical engineering continue to grow as important facets of the discipline. Within these, the value and applicability of proteomics were demonstrated in a number of interesting presentations. This year, as in the recent past, the AIChE Annual Meeting was held in conjunction with the American Electrophoresis Society Annual Meeting. American Electrophoresis Society presenters offered further academic and industrial viewpoints on the still-developing role of proteomics and proteomic technologies in biological and clinical analyses.

  3. High-throughput proteomics : optical approaches.

    Energy Technology Data Exchange (ETDEWEB)

    Davidson, George S.

    2008-09-01

    Realistic cell models could greatly accelerate our ability to engineer biochemical pathways and the production of valuable organic products, which would be of great use in the development of biofuels, pharmaceuticals, and the crops for the next green revolution. However, this level of engineering will require a great deal more knowledge about the mechanisms of life than is currently available. In particular, we need to understand the interactome (which proteins interact) as it is situated in the three dimensional geometry of the cell (i.e., a situated interactome), and the regulation/dynamics of these interactions. Methods for optical proteomics have become available that allow the monitoring and even disruption/control of interacting proteins in living cells. Here, a range of these methods is reviewed with respect to their role in elucidating the interactome and the relevant spatial localizations. Development of these technologies and their integration into the core competencies of research organizations can position whole institutions and teams of researchers to lead in both the fundamental science and the engineering applications of cellular biology. That leadership could be particularly important with respect to problems of national urgency centered around security, biofuels, and healthcare.

  4. Proteomic Technologies for the Study of Osteosarcoma

    Directory of Open Access Journals (Sweden)

    Stephanie D. Byrum

    2012-01-01

    Full Text Available Osteosarcoma is the most common primary bone cancer of children and is established during stages of rapid bone growth. The disease is a consequence of immature osteoblast differentiation, which gives way to a rapidly synthesized incompletely mineralized and disorganized bone matrix. The mechanism of osteosarcoma tumorogenesis is poorly understood, and few proteomic studies have been used to interrogate the disease thus far. Accordingly, these studies have identified proteins that have been known to be associated with other malignancies, rather than being osteosarcoma specific. In this paper, we focus on the growing list of available state-of-the-art proteomic technologies and their specific application to the discovery of novel osteosarcoma diagnostic and therapeutic targets. The current signaling markers/pathways associated with primary and metastatic osteosarcoma that have been identified by early-stage proteomic technologies thus far are also described.

  5. NIH Common Fund - Disruptive Proteomics Technologies - Challenges and Opportunities | Office of Cancer Clinical Proteomics Research

    Science.gov (United States)

    This Request for Information (RFI) is directed toward determining how best to accelerate research in disruptive proteomics technologies. The Disruptive Proteomics Technologies (DPT) Working Group of the NIH Common Fund wishes to identify gaps and opportunities in current technologies and methodologies related to proteome-wide measurements.  For the purposes of this RFI, “disruptive” is defined as very rapid, very significant gains, similar to the "disruptive" technology development that occurred in DNA sequencing technology.

  6. Applying proteomic technology to clinical virology.

    Science.gov (United States)

    Mancone, C; Ciccosanti, F; Montaldo, C; Perdomo, A B; Piacentini, M; Alonzi, T; Fimia, G M; Tripodi, M

    2013-01-01

    Developing antiviral drugs, vaccines and diagnostic markers is still the most ambitious challenge in clinical virology. In the past few decades, data from high-throughput technologies have allowed for the rapid development of new antiviral therapeutic strategies, thus making a profound impact on translational research. Most of the current preclinical studies in virology are aimed at evaluating the dynamic composition and localization of the protein platforms involved in various host-virus interactions. Among the different possible approaches, mass spectrometry-based proteomics is increasingly being used to define the protein composition in subcellular compartments, quantify differential protein expression among samples, characterize protein complexes, and analyse protein post-translational modifications. Here, we review the current knowledge of the most useful proteomic approaches in the study of viral persistence and pathogenicity, with a particular focus on recent advances in hepatitis C research. © 2012 The Authors. Clinical Microbiology and Infection © 2012 European Society of Clinical Microbiology and Infectious Diseases.

  7. Proteomics--a blessing or a curse? Application of proteomics technology to transplant medicine.

    Science.gov (United States)

    Kienzl-Wagner, Katrin; Pratschke, Johann; Brandacher, Gerald

    2011-09-15

    Proteomics has emerged as a powerful tool in clinical biomarker research. In the field of transplantation, proteomics aims not only at developing noninvasive tools for immune monitoring and identifying biomarkers of allograft rejection but also to gain mechanistic insights into the pathophysiology of an alloimmune response and hence defining new therapeutic targets. A basic knowledge of proteomic technology is a prerequisite to appreciate the complex data generated and required for critical evaluation/interpretation of proteomic-driven studies. This review provides an overview of proteomic approaches and its underlying concepts and discusses the advantages, clinical implications, challenges, and limitations of this exciting modality in transplantation.

  8. Fiber Optics Technology.

    Science.gov (United States)

    Burns, William E.

    1986-01-01

    Discusses various applications of fiber optics technology: information systems, industrial robots, medicine, television, transportation, and training. Types of jobs that will be available with fiber optics training (such as electricians and telephone cable installers and splicers) are examined. (CT)

  9. Optical Disk Technology.

    Science.gov (United States)

    Abbott, George L.; And Others

    1987-01-01

    This special feature focuses on recent developments in optical disk technology. Nine articles discuss current trends, large scale image processing, data structures for optical disks, the use of computer simulators to create optical disks, videodisk use in training, interactive audio video systems, impacts on federal information policy, and…

  10. Polymer optical motherboard technology

    Science.gov (United States)

    Keil, N.; Yao, H.; Zawadzki, C.; Grote, N.; Schell, M.

    2008-02-01

    In this paper, different hybridly integrated optical devices including optical multiplexer/ demultiplexer and optical transceivers are described. The devices were made using polymer planar light wave circuit (P2LC) technology. Laser diodes, photodiodes, and thin-film filters have been integrated. Key issues involved in this technology, in particular the coupling between laser diodes and polymer waveguides, and between waveguides and photodiodes and also fibers are discussed.

  11. Cancer proteomics: developments in technology, clinical use and commercialization.

    Science.gov (United States)

    Yeat, Nai Chien; Lin, Charlotte; Sager, Monica; Lin, Jimmy

    2015-08-01

    In the last two decades, advances in genomic, transcriptomic and proteomic methods have enabled us to identify and classify cancers by their molecular profiles. Many anticipate that a molecular taxonomy of cancer will not only lead to more effective subtyping of cancers but also earlier diagnoses, more informative prognoses and more targeted treatments. This article reviews recent technological developments in the field of proteomics, recent discoveries in proteomic cancer biomarker research and trends in clinical use. Readers are also informed of examples of successful commercialization, and the future of proteomics in cancer diagnostics.

  12. Advancing liquid chromatography- mass spectrometry based technologies for proteome research

    NARCIS (Netherlands)

    Boersema, P.J.

    2010-01-01

    In proteomics, high-tech nano-liquid chromatography (LC) and mass spectrometry (MS) instrumentation is used to routinely sequence proteins at a large scale. In this thesis, several technological developments are described to advance proteomics and their applicability is demonstrated in several diffe

  13. The Clinical Proteomic Technologies for Cancer | Antibody Portal

    Science.gov (United States)

    An objective of the Reagents and Resources component of NCI's Clinical Proteomic Technologies for Cancer Initiative is to generate highly characterized monoclonal antibodies to human proteins associated with cancer.

  14. Technologies for Optical Processing

    DEFF Research Database (Denmark)

    Stubkjær, Kristian

    2008-01-01

    The article consists of a Powerpoint presentation on technologies for optical processing. The paper concludes that the nonlinear elements based on SOA, fibers and waveguide structures have capabilities of simple processing at data rates of 100-600 Gb/s. Switching powers comparable to electronics...

  15. Advanced Adaptive Optics Technology Development

    Energy Technology Data Exchange (ETDEWEB)

    Olivier, S

    2001-09-18

    The NSF Center for Adaptive Optics (CfAO) is supporting research on advanced adaptive optics technologies. CfAO research activities include development and characterization of micro-electro-mechanical systems (MEMS) deformable mirror (DM) technology, as well as development and characterization of high-resolution adaptive optics systems using liquid crystal (LC) spatial light modulator (SLM) technology. This paper presents an overview of the CfAO advanced adaptive optics technology development activities including current status and future plans.

  16. PROTEOMICS: AN EVOLVING TECHNOLOGY IN LABORATORY MEDICINE

    Directory of Open Access Journals (Sweden)

    Dr. D J Venter

    2010-01-01

    Full Text Available The rapid developments in both genomics and proteomics will allow scientists to define the molecular pathways in normal and diseased cells. With these models, researchers will have the ability to predict previously unknown interactions and verify such predictions experimentally. Novel proteins, cellular functions, and pathways will also be unravelled. It is hoped that understanding the connections between cellular pathways and the ability to identify their associated biomarkers will greatly reduce the suffering and loss of life due to diseases.

  17. Reproducibility of Differential Proteomic Technologies in CPTAC Fractionated Xenografts

    Energy Technology Data Exchange (ETDEWEB)

    Tabb, David L.; Wang, Xia; Carr, Steven A.; Clauser, Karl R.; Mertins, Philipp; Chambers, Matthew C.; Holman, Jerry D.; Wang, Jing; Zhang, Bing; Zimmerman, Lisa J.; Chen, Xian; Gunawardena, Harsha P.; Davies, Sherri R.; Ellis, Matthew J. C.; Li, Shunqiang; Townsend, R. Reid; Boja, Emily S.; Ketchum, Karen A.; Kinsinger, Christopher R.; Mesri, Mehdi; Rodriguez, Henry; Liu, Tao; Kim, Sangtae; McDermott, Jason E.; Payne, Samuel H.; Petyuk, Vladislav A.; Rodland, Karin D.; Smith, Richard D.; Yang, Feng; Chan, Daniel W.; Zhang, Bai; Zhang, Hui; Zhang, Zhen; Zhou, Jian-Ying; Liebler, Daniel C.

    2016-03-04

    The NCI Clinical Proteomic Tumor Analysis Consortium (CPTAC) employed a pair of reference xenograft proteomes for initial platform validation and ongoing quality control of its data collection for The Cancer Genome Atlas (TCGA) tumors. These two xenografts, representing basal and luminal-B human breast cancer, were fractionated and analyzed on six mass spectrometers in a total of 46 replicates divided between iTRAQ and label-free technologies, spanning a total of 1095 LC-MS/MS experiments. These data represent a unique opportunity to evaluate the stability of proteomic differentiation by mass spectrometry over many months of time for individual instruments or across instruments running dissimilar workflows. We evaluated iTRAQ reporter ions, label-free spectral counts, and label-free extracted ion chromatograms as strategies for data interpretation. From these assessments we found that differential genes from a single replicate were confirmed by other replicates on the same instrument from 61-93% of the time. When comparing across different instruments and quantitative technologies, differential genes were reproduced by other data sets from 67-99% of the time. Projecting gene differences to biological pathways and networks increased the similarities. These overlaps send an encouraging message about the maturity of technologies for proteomic differentiation.

  18. Large Optics Technology.

    Science.gov (United States)

    1986-05-22

    EEEEEEEEEEmhEE SENSEffl -2-5 12" 110111111 LLLo 111M1. 2 15 .1 111-= NATIONAL BUREAU OF S Mouopy *9sO9u TESI , C N LARGE OPTICS TECHNOLOGY FINAL...Degree of DOCTOR OF PHILOSOPHY In the Graduate College THE UNIVERSITY OF ARIZONA 1981 !mw ’(’* 17 ABSTRACT The mirrors used in high energy laser systems...SCIENCES (GRADUATE) In Partial Fulfillment of the Requirements For the Degree of DOCTOR OF PHILOSOPHY In the Graduate College THE UNIVERSITY OF ARIZONA 1982

  19. Aptamer-based multiplexed proteomic technology for biomarker discovery.

    Directory of Open Access Journals (Sweden)

    Larry Gold

    Full Text Available BACKGROUND: The interrogation of proteomes ("proteomics" in a highly multiplexed and efficient manner remains a coveted and challenging goal in biology and medicine. METHODOLOGY/PRINCIPAL FINDINGS: We present a new aptamer-based proteomic technology for biomarker discovery capable of simultaneously measuring thousands of proteins from small sample volumes (15 µL of serum or plasma. Our current assay measures 813 proteins with low limits of detection (1 pM median, 7 logs of overall dynamic range (~100 fM-1 µM, and 5% median coefficient of variation. This technology is enabled by a new generation of aptamers that contain chemically modified nucleotides, which greatly expand the physicochemical diversity of the large randomized nucleic acid libraries from which the aptamers are selected. Proteins in complex matrices such as plasma are measured with a process that transforms a signature of protein concentrations into a corresponding signature of DNA aptamer concentrations, which is quantified on a DNA microarray. Our assay takes advantage of the dual nature of aptamers as both folded protein-binding entities with defined shapes and unique nucleotide sequences recognizable by specific hybridization probes. To demonstrate the utility of our proteomics biomarker discovery technology, we applied it to a clinical study of chronic kidney disease (CKD. We identified two well known CKD biomarkers as well as an additional 58 potential CKD biomarkers. These results demonstrate the potential utility of our technology to rapidly discover unique protein signatures characteristic of various disease states. CONCLUSIONS/SIGNIFICANCE: We describe a versatile and powerful tool that allows large-scale comparison of proteome profiles among discrete populations. This unbiased and highly multiplexed search engine will enable the discovery of novel biomarkers in a manner that is unencumbered by our incomplete knowledge of biology, thereby helping to advance the next

  20. Fiber Optics and Library Technology.

    Science.gov (United States)

    Koenig, Michael

    1984-01-01

    This article examines fiber optic technology, explains some of the key terminology, and speculates about the way fiber optics will change our world. Applications of fiber optics to library systems in three major areas--linkage of a number of mainframe computers, local area networks, and main trunk communications--are highlighted. (EJS)

  1. Optical technologies for space sensor

    Science.gov (United States)

    Wang, Hu; Liu, Jie; Xue, Yaoke; Liu, Yang; Liu, Meiying; Wang, Lingguang; Yang, Shaodong; Lin, Shangmin; Chen, Su; Luo, Jianjun

    2015-10-01

    Space sensors are used in navigation sensor fields. The sun, the earth, the moon and other planets are used as frame of reference to obtain stellar position coordinates, and then to control the attitude of an aircraft. Being the "eyes" of the space sensors, Optical sensor system makes images of the infinite far stars and other celestial bodies. It directly affects measurement accuracy of the space sensor, indirectly affecting the data updating rate. Star sensor technology is the pilot for Space sensors. At present more and more attention is paid on all-day star sensor technology. By day and night measurements of the stars, the aircraft's attitude in the inertial coordinate system can be provided. Facing the requirements of ultra-high-precision, large field of view, wide spectral range, long life and high reliability, multi-functional optical system, we integration, integration optical sensors will be future space technology trends. In the meantime, optical technologies for space-sensitive research leads to the development of ultra-precision optical processing, optical and precision test machine alignment technology. It also promotes the development of long-life optical materials and applications. We have achieved such absolute distortion better than ±1um, Space life of at least 15years of space-sensitive optical system.

  2. Key Technologies for Optical Packet Switching

    Institute of Scientific and Technical Information of China (English)

    Akira; Okada

    2003-01-01

    The paper describes our recent progress on key technologies and components for realizing optical packet switching, including an out-of-band optical label switching technique, an optical packet synchronizer and a burst-mode optical receiver.

  3. Key Technologies for Optical Packet Switching

    Institute of Scientific and Technical Information of China (English)

    Akira Okada

    2003-01-01

    The paper describes our recent progress on key technologies and components for realizing optical packet switching,including an out-of-band optical label switching technique, an optical packet synchronizer and a burst-mode optical receiver.

  4. Integrated Optics Theory and Technology

    CERN Document Server

    Hunsperger, Robert G

    2009-01-01

    Integrated Optics: Theory and Technology explains the subject of optoelectronic devices and their use in integrated optics and fiber optic systems. The text emphasizes the physics of how devices work and how they can be used in various applications. Mathematical derivations and the development of design equations are provided where necessary to explain phenomena and engineering principles, but a strong effort has been made to avoid obscuring important concepts with mathematical details. Illustrations and references from technical journals have been used to demonstrate the relevance of the theory to currently important topics in industry. This sixth edition of Integrated Optics: Theory and Technology includes updates and revisions in all chapters, as well as a completely new chapter on nanophotonics. Problems are included at the end of each chapter to develop students' knowledge. Scientists, engineers, students and engineering managers can utilize this book to obtain an overall view of the theory and the most ...

  5. Proteomics

    DEFF Research Database (Denmark)

    Dam, Svend; Stougaard, Jens

    2014-01-01

    proteomics data. Two characteristics of legumes are the high seed protein level and the nitrogen fixing symbiosis. Thus, the majority of the proteomics studies in Lotus have been performed on seed/pod and nodule/root tissues in order to create proteome reference maps and to enable comparative analyses within...... Lotus tissues or toward similar tissues from other legume species. More recently, N-glycan structures and compositions have been determined from mature Lotus seeds using glycomics and glycoproteomics, and finally, phosphoproteomics has been employed...... and annotated Lotus japonicus (Lotus) genome has been essential for obtaining high-quality protein identifications from proteomics studies. Furthermore, additional genomics and transcriptomics studies from several Lotus species/ecotypes support putative gene structures and these can be further supported using...

  6. Marine proteomics: a critical assessment of an emerging technology.

    Science.gov (United States)

    Slattery, Marc; Ankisetty, Sridevi; Corrales, Jone; Marsh-Hunkin, K Erica; Gochfeld, Deborah J; Willett, Kristine L; Rimoldi, John M

    2012-10-26

    The application of proteomics to marine sciences has increased in recent years because the proteome represents the interface between genotypic and phenotypic variability and, thus, corresponds to the broadest possible biomarker for eco-physiological responses and adaptations. Likewise, proteomics can provide important functional information regarding biosynthetic pathways, as well as insights into mechanism of action, of novel marine natural products. The goal of this review is to (1) explore the application of proteomics methodologies to marine systems, (2) assess the technical approaches that have been used, and (3) evaluate the pros and cons of this proteomic research, with the intent of providing a critical analysis of its future roles in marine sciences. To date, proteomics techniques have been utilized to investigate marine microbe, plant, invertebrate, and vertebrate physiology, developmental biology, seafood safety, susceptibility to disease, and responses to environmental change. However, marine proteomics studies often suffer from poor experimental design, sample processing/optimization difficulties, and data analysis/interpretation issues. Moreover, a major limitation is the lack of available annotated genomes and proteomes for most marine organisms, including several "model species". Even with these challenges in mind, there is no doubt that marine proteomics is a rapidly expanding and powerful integrative molecular research tool from which our knowledge of the marine environment, and the natural products from this resource, will be significantly expanded.

  7. Proteomics applied to exercise physiology: a cutting-edge technology.

    Science.gov (United States)

    Petriz, Bernardo A; Gomes, Clarissa P; Rocha, Luiz A O; Rezende, Taia M B; Franco, Octávio L

    2012-03-01

    Exercise research has always drawn the attention of the scientific community because it can be widely applied to sport training, health improvement, and disease prevention. For many years numerous tools have been used to investigate the several physiological adaptations induced by exercise stimuli. Nowadays a closer look at the molecular mechanisms underlying metabolic pathways and muscular and cardiovascular adaptation to exercise are among the new trends in exercise physiology research. Considering this, to further understand these adaptations as well as pathology attenuation by exercise, several studies have been conducted using molecular investigations, and this trend looks set to continue. Through enormous biotechnological advances, proteomic tools have facilitated protein analysis within complex biological samples such as plasma and tissue, commonly used in exercise research. Until now, classic proteomic tools such as one- and two-dimensional polyacrylamide gel electrophoresis have been used as standard approaches to investigate proteome modulation by exercise. Furthermore, other recently developed in gel tools such as differential gel electrophoresis (DIGE) and gel-free techniques such as the protein labeling methods (ICAT, SILAC, and iTRAQ) have empowered proteomic quantitative analysis, which may successfully benefit exercise proteomic research. However, despite the three decades of 2-DE development, neither classic nor novel proteomic tools have been convincingly explored by exercise researchers. To this end, this review gives an overview of the directions in which exercise-proteome research is moving and examines the main tools that can be used as a novel strategy in exercise physiology investigation.

  8. Fiber-optic technology review

    Energy Technology Data Exchange (ETDEWEB)

    Lyons, P.B.

    1980-01-01

    A history of fiber technology is presented. The advantages of fiber optics are discussed (bandwidth, cost, weight and size, nonmetallic construction and isolation). Some aspects of the disadvantages of fiber systems briefly discussed are fiber and cable availability, fiber components, radiation effects, receivers and transmitters, and material dispersion. Particular emphasis over the next several years will involve development of fibers and systems optimized for use at wavelengths near 1.3 ..mu..m and development of wavelengths multiplexers for simultaneous system operation at several wavelengths.

  9. Proteomics

    DEFF Research Database (Denmark)

    Tølbøll, Trine Højgaard; Danscher, Anne Mette; Andersen, Pia Haubro;

    2012-01-01

    different proteins were identified, with 146 proteins available for identification in C, 279 proteins in D and 269 proteins in L. A functional annotation of the identified proteins was obtained using the on-line Blast2GO tool. Three hundred and sixteen of the identified proteins could be subsequently...... grouped manually to one or more of five major functional groups related to metabolism, cell structure, immunity, apoptosis and angiogenesis. These were chosen to represent basic cell functions and biological processes potentially involved in the pathogenesis of CHD. The LC–MS/MS-based proteomic analysis...

  10. Ultrasonic precision optical grinding technology

    Science.gov (United States)

    Cahill, Michael J.; Bechtold, Michael J.; Fess, Edward; Wolfs, Frank L.; Bechtold, Rob

    2015-10-01

    As optical geometries become more precise and complex and a wider range of materials are used, the processes used for manufacturing become more critical. As the preparatory stage for polishing, this is especially true for grinding. Slow processing speeds, accelerated tool wear, and poor surface quality are often detriments in manufacturing glass and hard ceramics. The quality of the ground surface greatly influences the polishing process and the resulting finished product. Through extensive research and development, OptiPro Systems has introduced an ultrasonic assisted grinding technology, OptiSonic, which has numerous advantages over traditional grinding processes. OptiSonic utilizes a custom tool holder designed to produce oscillations in line with the rotating spindle. A newly developed software package called IntelliSonic is integral to this platform. IntelliSonic automatically characterizes the tool and continuously optimizes the output frequency for optimal cutting while in contact with the part. This helps maintain a highly consistent process under changing load conditions for a more accurate surface. Utilizing a wide variety of instruments, test have proven to show a reduction in tool wear and increase in surface quality while allowing processing speeds to be increased. OptiSonic has proven to be an enabling technology to overcome the difficulties seen in grinding of glass and hard optical ceramics. OptiSonic has demonstrated numerous advantages over the standard CNC grinding process. Advantages are evident in reduced tool wear, better surface quality, and reduced cycle times due to increased feed rates. These benefits can be seen over numerous applications within the precision optics industry.

  11. IC-Compatible Technologies for Optical MEMS

    Energy Technology Data Exchange (ETDEWEB)

    Krygowski, T.W.; Sniegowski, J.J.

    1999-04-30

    Optical Micro Electro Mechanical Systems (Optical MEMS) Technology holds the promise of one-day producing highly integrated optical systems on a common, monolithic substrate. The choice of fabrication technology used to manufacture Optical MEMS will play a pivotal role in the size, functionality and ultimately the cost of optical Microsystems. By leveraging the technology base developed for silicon integrated circuits, large batches of routers, emitters, detectors and amplifiers will soon be fabricated for literally pennies per part. In this article we review the current status of technologies used for Optical MEMS, as well as fabrication technologies of the future, emphasizing manufacturable surface micromachining approaches to producing reliable, low-cost devices for optical communications applications.

  12. Ultrahigh-Speed Optical Transmission Technology

    CERN Document Server

    Weber, Hans-Georg

    2007-01-01

    Ultrahigh-speed optical transmission technology is a key technology for increasing the communication capacity. In optical fibre networks, the number of wavelength channels and the bit rate per wavelength channel, i.e. the TDM (Time Division Multiplexing) bit rate, determine the transmission capacity. Currently, TDM bit rates of more than 40 Gbit/s require optical signal processing (Optical Time Division Multiplexing, OTDM). OTDM bit rates of up to 1.2 Tbit/s have already been reported. The devices developed for ultrahigh-speed optical transmission are not limited to communication applications only. They are key devices for high-speed optical signal processing, i.e. monitoring, measurement and control, and will thus give a wide technological basis for innovative science and technology. All these aspects of ultrahigh-speed optical transmission technology are described in detail in this book.

  13. A Review of Optical NDT Technologies

    OpenAIRE

    Hong Zhang(Department of Physics and Center for Quantum Spacetime (CQUeST), Sogang University, 35 Baekbeom-ro, Mapo-gu, Seoul, 121-742 Korea); Rong-Sheng Lu; Gui-Yun Tian; Yong-Kai Zhu

    2011-01-01

    Optical non-destructive testing (NDT) has gained more and more attention in recent years, mainly because of its non-destructive imaging characteristics with high precision and sensitivity. This paper provides a review of the main optical NDT technologies, including fibre optics, electronic speckle, infrared thermography, endoscopic and terahertz technology. Among them, fibre optics features easy integration and embedding, electronic speckle focuses on whole-field high precision detection, inf...

  14. Fiber optics physics and technology

    CERN Document Server

    Mitschke, Fedor

    2016-01-01

    This book tells you all you want to know about optical fibers: Their structure, their light-guiding mechanism, their material and manufacture, their use. It began with telephone, then came telefax and email. Today we use search engines, music downloads and internet videos, all of which require shuffling of bits and bytes by the zillions. The key to all this is the conduit: the line which is designed to carry massive amounts of data at breakneck speed. In their data carrying capacity optical fiber lines beat all other technologies (copper cable, microwave beacons, satellite links) hands down, at least in the long haul; wireless devices rely on fibers, too. Several effects tend to degrade the signal as it travels down the fiber: they are spelled out in detail. Nonlinear processes are given due consideration for a twofold reason: On the one hand they are fundamentally different from the more familiar processes in electrical cable. On the other hand, they form the basis of particularly interesting and innovative ...

  15. Fiber Optics Physics and Technology

    CERN Document Server

    Mitschke, Fedor

    2010-01-01

    Telephone, telefax, email and internet -- the key ingredient of the inner workings is the conduit: the line which is designed to carry massive amounts of data at breakneck speed. In their data-carrying capacity optical fiber lines beat other technologies (copper cable, microwave beacons, satellite links) hands down, at least in the long haul. This book tells you all you want to know about optical fibers: Their structure, their light-guiding mechanism, their material and manufacture, their use. Several effects tend to degrade the signal as it travels down the fiber: they are spelled out in detail. Nonlinear processes are given due consideration for a twofold reason: On the one hand they are fundamentally different from the more familiar processes in electrical cable. On the other hand, they form the basis of particularly interesting and innovative applications, provided they are understood well enough. A case in point is the use of so-called solitons, i.e. special pulses of light which have the wonderful prope...

  16. Optics and photonics: essential technologies for our nation (technology & engineering)

    CERN Document Server

    Research, Committee on Harnessing Light: Capitalizing on Optical Science Trends and Challenges for Future; Sciences, Division on Engineering and Physical; Council, National Research

    2013-01-01

    Optics and photonics technologies are ubiquitous: they are responsible for the displays on smart phones and computing devices, optical fiber that carries the information in the internet, advanced precision manufacturing, enhanced defense capabilities, and a plethora of medical diagnostics tools. The opportunities arising from optics and photonics offer the potential for even greater societal impact in the next few decades, including solar power generation and new efficient lighting that could transform the nation's energy landscape and new optical capabilities that will be essential to support the continued exponential growth of the Internet. As described in the National Research Council report Optics and Photonics: Essential Technologies for our Nation, it is critical for the United States to take advantage of these emerging optical technologies for creating new industries and generating job growth. The report assesses the current state of optical science and engineering in the United States and abroad--incl...

  17. Optical Network Technologies for Future Digital Cinema

    Directory of Open Access Journals (Sweden)

    Sajid Nazir

    2016-01-01

    Full Text Available Digital technology has transformed the information flow and support infrastructure for numerous application domains, such as cellular communications. Cinematography, traditionally, a film based medium, has embraced digital technology leading to innovative transformations in its work flow. Digital cinema supports transmission of high resolution content enabled by the latest advancements in optical communications and video compression. In this paper we provide a survey of the optical network technologies for supporting this bandwidth intensive traffic class. We also highlight the significance and benefits of the state of the art in optical technologies that support the digital cinema work flow.

  18. Integrating proteomic and functional genomic technologies in discovery-driven translational breast cancer research

    DEFF Research Database (Denmark)

    Celis, Julio E; Gromov, Pavel; Gromova, Irina

    2003-01-01

    The application of state-of-the-art proteomics and functional genomics technologies to the study of cancer is rapidly shifting toward the analysis of clinically relevant samples derived from patients, as the ultimate aim of translational research is to bring basic discoveries closer to the bedsid...

  19. Clinical proteomics in kidney disease as an exponential technology: heading towards the disruptive phase.

    Science.gov (United States)

    Sanchez-Niño, Maria Dolores; Sanz, Ana B; Ramos, Adrian M; Fernandez-Fernandez, Beatriz; Ortiz, Alberto

    2017-04-01

    Exponential technologies double in power or processing speed every year, whereas their cost halves. Deception and disruption are two key stages in the development of exponential technologies. Deception occurs when, after initial introduction, technologies are dismissed as irrelevant, while they continue to progress, perhaps not as fast or with so many immediate practical applications as initially thought. Twenty years after the first publications, clinical proteomics is still not available in most hospitals and some clinicians have felt deception at unfulfilled promises. However, there are indications that clinical proteomics may be entering the disruptive phase, where, once refined, technologies disrupt established industries or procedures. In this regard, recent manuscripts in CKJ illustrate how proteomics is entering the clinical realm, with applications ranging from the identification of amyloid proteins in the pathology lab, to a new generation of urinary biomarkers for chronic kidney disease (CKD) assessment and outcome prediction. Indeed, one such panel of urinary peptidomics biomarkers, CKD273, recently received a Food and Drug Administration letter of support, the first ever in the CKD field. In addition, a must-read resource providing information on kidney disease-related proteomics and systems biology databases and how to access and use them in clinical decision-making was also recently published in CKJ.

  20. Development and Application of Novel Electron Transfer Dissociation-based Technologies for Proteomics

    NARCIS (Netherlands)

    Frese, C.

    2013-01-01

    Proteins are key actors in all cellular processes and pathways and almost all diseases are linked to perturbations of proteins, their modification state or interaction networks. Mass spectrometry-based proteomics has matured to a high-throughput quantitative technology, aiming to provide sensitive,

  1. Optical technologies for intraoperative neurosurgical guidance.

    Science.gov (United States)

    Valdés, Pablo A; Roberts, David W; Lu, Fa-Ke; Golby, Alexandra

    2016-03-01

    Biomedical optics is a broadly interdisciplinary field at the interface of optical engineering, biophysics, computer science, medicine, biology, and chemistry, helping us understand light-tissue interactions to create applications with diagnostic and therapeutic value in medicine. Implementation of biomedical optics tools and principles has had a notable scientific and clinical resurgence in recent years in the neurosurgical community. This is in great part due to work in fluorescence-guided surgery of brain tumors leading to reports of significant improvement in maximizing the rates of gross-total resection. Multiple additional optical technologies have been implemented clinically, including diffuse reflectance spectroscopy and imaging, optical coherence tomography, Raman spectroscopy and imaging, and advanced quantitative methods, including quantitative fluorescence and lifetime imaging. Here we present a clinically relevant and technologically informed overview and discussion of some of the major clinical implementations of optical technologies as intraoperative guidance tools in neurosurgery.

  2. A Review of Optical NDT Technologies

    Directory of Open Access Journals (Sweden)

    Hong Zhang

    2011-08-01

    Full Text Available Optical non-destructive testing (NDT has gained more and more attention in recent years, mainly because of its non-destructive imaging characteristics with high precision and sensitivity. This paper provides a review of the main optical NDT technologies, including fibre optics, electronic speckle, infrared thermography, endoscopic and terahertz technology. Among them, fibre optics features easy integration and embedding, electronic speckle focuses on whole-field high precision detection, infrared thermography has unique advantages for tests of combined materials, endoscopic technology provides images of the internal surface of the object directly, and terahertz technology opens a new direction of internal NDT because of its excellent penetration capability to most of non-metallic materials. Typical engineering applications of these technologies are illustrated, with a brief introduction of the history and discussion of recent progress.

  3. Biomedical Optical Imaging Technologies Design and Applications

    CERN Document Server

    2013-01-01

    This book provides an introduction to design of biomedical optical imaging technologies and their applications. The main topics include: fluorescence imaging, confocal imaging, micro-endoscope, polarization imaging, hyperspectral imaging, OCT imaging, multimodal imaging and spectroscopic systems. Each chapter is written by the world leaders of the respective fields, and will cover: principles and limitations of optical imaging technology, system design and practical implementation for one or two specific applications, including design guidelines, system configuration, optical design, component requirements and selection, system optimization and design examples, recent advances and applications in biomedical researches and clinical imaging. This book serves as a reference for students and researchers in optics and biomedical engineering.

  4. Korea-China Optical Technology Research Centre

    Energy Technology Data Exchange (ETDEWEB)

    Kim, Cheol Jung; Cha, H. K.; Rhee, Y. J. (and others)

    2007-04-15

    The main objectives of this project are to develop cooperative channel by personnel exchanges between industrial, educational and research partners of Korea and China on the fields of optical technologies which are the basis of optical industry and being spot-lighted as new industry of 21th century, and to raise the class of Korean optical technology up to world class by utilization of Chinese large facilities through the cooperative research between the optical technology institutions of both sides. To attain the goals mentioned above, we carried out the cooperative researches between the Korean and Chinese optical technology institutions in the following 7 fields; ? research cooperation between KAERI-SITP for the quantum structured far-IR sensor technology - research cooperation for the generation of femtosecond nuclear fusion induced neutrons - research cooperation between KAERI-AIOFM for laser environment analysis and remote sensing technology - research cooperation between KAERI-SIOM for advanced diode-pumped laser technology - cooperative research related on linear and nonlinear magneto-optical properties of advanced magnetic quantum structures - design of pico-second PW high power laser system and its simulation and - cooperative research related on the femto-second laser-plasma interaction physics.

  5. Enabling technologies for fiber optic sensing

    Science.gov (United States)

    Ibrahim, Selwan K.; Farnan, Martin; Karabacak, Devrez M.; Singer, Johannes M.

    2016-04-01

    In order for fiber optic sensors to compete with electrical sensors, several critical parameters need to be addressed such as performance, cost, size, reliability, etc. Relying on technologies developed in different industrial sectors helps to achieve this goal in a more efficient and cost effective way. FAZ Technology has developed a tunable laser based optical interrogator based on technologies developed in the telecommunication sector and optical transducer/sensors based on components sourced from the automotive market. Combining Fiber Bragg Grating (FBG) sensing technology with the above, high speed, high precision, reliable quasi distributed optical sensing systems for temperature, pressure, acoustics, acceleration, etc. has been developed. Careful design needs to be considered to filter out any sources of measurement drifts/errors due to different effects e.g. polarization and birefringence, coating imperfections, sensor packaging etc. Also to achieve high speed and high performance optical sensing systems, combining and synchronizing multiple optical interrogators similar to what has been used with computer/processors to deliver super computing power is an attractive solution. This path can be achieved by using photonic integrated circuit (PIC) technology which opens the doors to scaling up and delivering powerful optical sensing systems in an efficient and cost effective way.

  6. Optical technologies for computational intelligence

    Science.gov (United States)

    Pavlov, Alexander V.

    2001-11-01

    Optics has a number of deep analogies with main principles of Computational Intelligence. We can see strong analogies between basic optical phenomena, used in Fourier-holography, and mathematical foundations of Fuzzy Set Theory. Also, analogies between optical holography technique and principles of Neural Networks Paradigm can be seen. Progress in new holographic recording media with self-developing property leads to Evolutionary Computations holographic realization. Based on these analogies we review holographic techniques from two points of view: Fuzzy Logic and Fuzzy relations.

  7. Novel possibilities in the study of the salivary proteomic profile using SELDI-TOF/MS technology

    Science.gov (United States)

    ARDITO, FATIMA; PERRONE, DONATELLA; COCCHI, ROBERTO; LO RUSSO, LUCIO; DE LILLO, ALFREDO; GIANNATEMPO, GIOVANNI; LO MUZIO, LORENZO

    2016-01-01

    There is currently an increasing interest in exploring human saliva to identify salivary diagnostic and prognostic biomarkers, since the collection of saliva is rapid, non-invasive and stress-free. Diagnostic tests on saliva are common and cost-effective, particularly for patients who need to monitor their hormone levels or the effectiveness of undergoing therapies. Furthermore, salivary diagnostics is ideal for surveillance studies and in situations where fast results and inexpensive technologies are required. The most important constituents of saliva are proteins, the expression levels of which may be modified due to variations of the cellular conditions. Therefore, the different profile of proteins detected in saliva, including their absence, presence or altered levels, is a potential biomarker of certain physiological and/or pathological conditions. A promising novel approach to study saliva is the global analysis of salivary proteins using proteomic techniques. In the present study, surface-enhanced laser desorption/ionization-time-of-flight/mass spectrometry (SELDI-TOF/MS), one of the most recent proteomic tools for the identification of novel biomarkers, is reviewed. In addition, the possible use of this technique in salivary proteomic studies is discussed, since SELDI technology combines the precision of matrix-assisted laser desorption/ionization-TOF/MS proteomic analysis and the high-throughput nature of protein array analysis. PMID:26998108

  8. Review:Proteomic technology for biomarker profiling in cancer: an update

    Institute of Scientific and Technical Information of China (English)

    ALAOUI-JAMALI Moulay A.; XU Ying-jie

    2006-01-01

    The progress in the understanding of cancer progression and early detection has been slow and frustrating due to the complex multifactorial nature and heterogeneity of the cancer syndrome. To date, no effective treatment is available for advanced cancers, which remain a major cause of morbidity and mortality. Clearly, there is urgent need to unravel novel biomarkers for early detection.Most of the functional information of the cancer-associated genes resides in the proteome. The later is an exceptionally complex biological system involving several proteins that function through posttranslational modifications and dynamic intermolecular collisions with partners. These protein complexes can be regulated by signals emanating from cancer cells, their surrounding tissue microenvironment, and/or from the host. Some proteins are secreted and/or cleaved into the extracellular milieu and may represent valuable serum biomarkers for diagnosis purpose. It is estimated that the cancer proteome may include over 1.5million proteins as a result of posttranslational processing and modifications. Such complexity clearly highlights the need for ultra-high resolution proteomic technology for robust quantitative protein measurements and data acquisition. This review is to update the current research efforts in high-resolution proteomic technology for discovery and monitoring cancer biomarkers.

  9. Nonlinear Optical Terahertz Technology Project

    Data.gov (United States)

    National Aeronautics and Space Administration — Our approach is based on high-Q optical WGM resonators made with a nonlinear crystal. Such resonators have been demonstrated to dramatically enhance nonlinear...

  10. High Spectral Density Optical Communication Technologies

    CERN Document Server

    Nakazawa, Masataka; Miyazaki, Tetsuya

    2010-01-01

    The latest hot topics of high-spectral density optical communication systems using digital coherent optical fibre communication technologies are covered by this book. History and meaning of a "renaissance" of the technology, requirements to the Peta-bit/s class "new generation network" are also covered in the first part of this book. The main topics treated are electronic and optical devices, digital signal processing including forward error correction, modulation formats as well as transmission and application systems. The book serves as a reference to researchers and engineers.

  11. Technology of optical azimuth transmission

    Science.gov (United States)

    Lu, Honggang; Hu, Chunsheng; Wang, Xingshu; Gao, Yang

    2012-11-01

    It often needs transfer a reference from one place to another place in aerospace and guided missile launching. At first, principles of several typical optical azimuth transmission methods are presented. Several typical methods are introduced, such as Theodolite (including gyro-theodolite) collimation method, Camera series method, Optical apparatus for azimuth method and polarization modulated light transmission method. For these typical azimuth transmission methods, their essential theories are elaborated. Then the devices, the application fields and limitations of these typical methods' are presented. Theodolite (including gyro-theodolite) collimation method is used in the ground assembly of spacecraft. Camera series method and optical apparatus for azimuth method are used in azimuth transmission between different decks of ship. Polarization modulated light transmission method is used in azimuth transmission of rocket and guided missile. At the last, the further developments of these methods are discussed.

  12. Advances in Proteomic Technologies and Its Contribution to the Field of Cancer

    Directory of Open Access Journals (Sweden)

    Mehdi Mesri

    2014-01-01

    Full Text Available Systematic studies of the cancer genome have generated a wealth of knowledge in recent years. These studies have uncovered a number of new cancer genes not previously known to be causal targets in cancer. Genetic markers can be used to determine predisposition to tumor development, but molecularly targeted treatment strategies are not widely available for most cancers. Precision care plans still must be developed by understanding and implementing basic science research into clinical treatment. Proteomics is continuing to make major strides in the discovery of fundamental biological processes as well as more recent transition into an assay platform capable of measuring hundreds of proteins in any biological system. As such, proteomics can translate basic science discoveries into the clinical practice of precision medicine. The proteomic field has progressed at a fast rate over the past five years in technology, breadth and depth of applications in all areas of the bioscience. Some of the previously experimental technical approaches are considered the gold standard today, and the community is now trying to come to terms with the volume and complexity of the data generated. Here I describe contribution of proteomics in general and biological mass spectrometry in particular to cancer research, as well as related major technical and conceptual developments in the field.

  13. Developments in distributed optical fiber detection technology

    Science.gov (United States)

    Ye, Wei; Zhu, Qianxia; You, Tianrong

    2014-12-01

    The distributed optical fiber detection technology plays an important role in many fields, such as key regional security monitoring, pipeline maintenance and communication cable protection. It is superior to the traditional detector, and has a good prospect. This paper presents an overview of various distributed optical fiber sensors. At first, some related technologies of the optical fiber detection schemes are introduced in respect of sensing distance, real-time ability, signal strength, and system complexity; and the advantages and limitations of fiber gratings sensors, reflection-based optical fiber sensors, and interference- based optical fiber sensors are discussed. Then some advanced distributed optical fiber detection systems are mentioned. And the double-loop Sagnac distributed system is improved by adding photoelectric modulators and depolarizers. In order to denoise and enhance the original signal, a spectral subtraction-likelihood ratio method is improved. The experiment results show the spatial resolution is +/-15m per kilometer. Finally, based on the development trends of optical fiber detection technology at home and abroad, development tendency and application fields are predicted.

  14. Integrated optics theory and technology

    CERN Document Server

    Hunsperger, Robert G

    1984-01-01

    Our intent in producing this book was to provide a text that would be comprehensive enough for an introductory course in integrated optics, yet concise enough in its mathematical derivations to be easily readable by a practicing engineer who desires an overview of the field. The response to the first edition has indeed been gratifying; unusually strong demand has caused it to be sold out during the initial year of publication, thus providing us with an early opportunity to produce this updated and improved second edition. This development is fortunate, because integrated optics is a very rapidly progressing field, with significant new research being regularly reported. Hence, a new chapter (Chap. 17) has been added to review recent progress and to provide numerous additional references to the relevant technical literature. Also, thirty-five new problems for practice have been included to supplement those at the ends of chapters in the first edition. Chapters I through 16 are essentially unchanged, except for ...

  15. Enabling Technologies for Cognitive Optical Networks

    DEFF Research Database (Denmark)

    Borkowski, Robert

    to technologies required for their implementation. Operation of CON-enabling machine learning methods is tested experimentally and DSP-based OPM techniques for software-defined receivers are introduced and verified. The presented set of technologies forms a foundation, upon which next generation fiber-optic data......Cognition is a new paradigm for optical networking, in which the network has capabilities to observe, plan, decide, and act autonomously in order to optimize the end-to-end performance and minimize the need for human supervision. This PhD thesis expands the state of the art on cognitive optical......, and machine learning algorithms that make cognition possible. Secondly, advanced optical performance monitoring (OPM) capabilities performed via digital signal processing (DSP) that provide CONs with necessary feedback information allowing for autonomous network optimization. The research results presented...

  16. Optical assay technology for safeguards

    Energy Technology Data Exchange (ETDEWEB)

    Edelson, M.C.; Lipert, R.J.; Murray, G.M.; Schuler, R.A.; Vera, J.; Wang, Z.M.; Weeks, S.J.

    1990-10-01

    Research conducted in the Ames Laboratory Nuclear Safeguards and Security Program during the period July 1, 1990 to September 30, 1990 is reviewed; included are reprints and preprints of papers written during this quarter. The first demonstration of isotopic selectivity in Inductively Coupled Plasma -- Laser Excited Atomic Fluorescence Spectroscopy (ICP-LEAFS) is reported and the application of ICP-LEAFS to U isotopic analysis is discussed. Current work in applying optical spectroscopy to the analytical determination of gas phase metal atoms is reviewed. Program administration topics are included in a separately bound Management Supplement to this report.

  17. Differential cerebro spinal fluid proteome investigation of Leber hereditary optic neuropathy (LHON) and multiple sclerosis.

    Science.gov (United States)

    D'Aguanno, Simona; Barassi, Alessandra; Lupisella, Santina; d'eril, Gianlodovico Melzi; Del Boccio, Piero; Pieragostino, Damiana; Pallotti, Francesco; Carelli, Valerio; Valentino, Maria Lucia; Liguori, Rocco; Avoni, Patrizia; Bernardini, Sergio; Gambi, Domenico; Urbani, Andrea; Federici, Giorgio

    2008-01-01

    Leber's hereditary optic neuropathy (LHON) is a genetic disease leading to the loss of central vision and optic nerve atrophy. The existence of occasional cases of LHON patients developing a Multiple Sclerosis (MS)-like illness and the hypothesis that mtDNA variants may be involved in MS suggest the possibility of some common molecular mechanisms linking the two diseases. We have pursued a comparative proteomics approach on cerebrospinal fluid (CSF) samples from LHON and MS patients, as well as healthy donors by employing 2-DE gel separations coupled to MALDI-TOF-MS and nLC-MS/MS investigations. 7 protein spots showed significant differential distribution among the three groups. Both CSF of LHON or MS patients are characterized by lower level of transthyretin dimer adduct while a specific up regulation of Apo A-IV was detected in LHON CSF.

  18. Innovative Technologies for Optical and Infrared Astronomy

    CERN Document Server

    Cunningham, C R; Molster, F; Kendrew, S; Kenworthy, M A; Snik, F

    2012-01-01

    Advances in astronomy are often enabled by adoption of new technology. In some instances this is where the technology has been invented specifically for astronomy, but more usually it is adopted from another scientific or industrial area of application. The adoption of new technology typically occurs via one of two processes. The more usual is incremental progress by a series of small improvements, but occasionally this process is disruptive, where a new technology completely replaces an older one. One of the activities of the OPTICON Key Technology Network over the past few years has been a technology forecasting exercise. Here we report on a recent event which focused on the more radical, potentially disruptive technologies for ground-based, optical and infrared astronomy.

  19. Efficient manufacturing technology of metal optics

    Science.gov (United States)

    Zhang, Jizhen; Wu, Yanxiong; Zhang, Xin; Zhang, Liping; Wang, Lingjie; Qu, Hemeng

    2015-10-01

    The efficient manufacturing technologies greatly accelerate the development and production process. Optical components have higher precision requirements than mechanical parts. This provides great challenge for rapid manufacturing. Metallic optical system is featured high resolution, wide spectral range, light weight, compact design, low cost and short manufacturing period. Reflective mirrors and supporting structures can be made from the same material to improve athermal performance of the system. Common materials for metal mirrors in optical applications include aluminum, copper, beryllium, aluminum beryllium alloy and so on. Their physical characteristics and relative advantages are presented. Most kinds of metals have good machinability and can be manufactured by many kinds of producing methods. This makes metallic optical system saving 30%~60% cost and time than others. The manufacturing process of metal mirror is different due to its working spectral. The metal mirror can be directly manufactured by single point diamond turning. This is an outstanding technique in point of ultra-precision as well as economical manufacture of mirrors. The roughness values and form accuracy of optical surfaces after diamond turning can satisfy the quality level for applications in the near infrared and infrared range. And for visible light spectral the turning structures must be removed with a smoothing procedure in order to minimize the scatter losses. Some smoothing methods to obtain visible quality metal mirrors are given in this paper. Some new manufacturing technology, such as 3D printing, can be used for metallic optical system and several promising techniques are presented.

  20. Optical coherence tomography technology and applications

    CERN Document Server

    Fujimoto, James

    2015-01-01

    Optical coherence tomography (OCT) is the optical analog of ultrasound imaging and is a powerful imaging technique that enables non-invasive, in vivo, high resolution, cross-sectional imaging in biological tissue.  Between 30 to 40 Million OCT imaging procedures are performed per year in ophthalmology.  The overall market is estimated at more than 0.5 Billion USD.  A new generation OCT technology was developed, dramatically increasing resolution and speed, achieving in vivo optical biopsy, i.e. the visualization of tissue architectural morphology in situ and in real time.  Functional extensions of OCT technology enable non-invasive, depth resolved functional assessment and imaging of tissue.  The book introduces OCT technology and applications not only from an optical and technological viewpoint, but also from the biomedical and clinical perspective. This second edition is widely extended and covers significantly more topics then the first edition of this book. The chapters are written leading intern...

  1. Applications of Optical Technology: Information Retrieval.

    Science.gov (United States)

    O'Connor, Mary Ann

    1991-01-01

    Discusses applications of optical technology, especially CD-ROMs, to information management needs. Information retrieval problems are discussed; design questions that concern the format of the data, indexing methods, and retrieval capabilities are presented; the need for updates is considered; access requirements are discussed; and the importance…

  2. Fiber Optic Communications Technology. A Status Report.

    Science.gov (United States)

    Hull, Joseph A.

    Fiber optic communications (communications over very pure glass transmission channels of diameter comparable to a human hair) is an emerging technology which promises most improvements in communications capacity at reasonable cost. The fiber transmission system offers many desirable characteristics representing improvements over conventional…

  3. Technology Development for High Efficiency Optical Communications

    Science.gov (United States)

    Farr, William H.

    2012-01-01

    Deep space optical communications is a significantly more challenging operational domain than near Earth space optical communications, primarily due to effects resulting from the vastly increased range between transmitter and receiver. The NASA Game Changing Development Program Deep Space Optical Communications Project is developing four key technologies for the implementation of a high efficiency telecommunications system that will enable greater than 10X the data rate of a state-of-the-art deep space RF system (Ka-band) for similar transceiver mass and power burden on the spacecraft. These technologies are a low mass spacecraft disturbance isolation assembly, a flight qualified photon counting detector array, a high efficiency flight laser amplifier and a high efficiency photon counting detector array for the ground-based receiver.

  4. Unlocking biomarker discovery: large scale application of aptamer proteomic technology for early detection of lung cancer.

    Directory of Open Access Journals (Sweden)

    Rachel M Ostroff

    Full Text Available BACKGROUND: Lung cancer is the leading cause of cancer deaths worldwide. New diagnostics are needed to detect early stage lung cancer because it may be cured with surgery. However, most cases are diagnosed too late for curative surgery. Here we present a comprehensive clinical biomarker study of lung cancer and the first large-scale clinical application of a new aptamer-based proteomic technology to discover blood protein biomarkers in disease. METHODOLOGY/PRINCIPAL FINDINGS: We conducted a multi-center case-control study in archived serum samples from 1,326 subjects from four independent studies of non-small cell lung cancer (NSCLC in long-term tobacco-exposed populations. Sera were collected and processed under uniform protocols. Case sera were collected from 291 patients within 8 weeks of the first biopsy-proven lung cancer and prior to tumor removal by surgery. Control sera were collected from 1,035 asymptomatic study participants with ≥ 10 pack-years of cigarette smoking. We measured 813 proteins in each sample with a new aptamer-based proteomic technology, identified 44 candidate biomarkers, and developed a 12-protein panel (cadherin-1, CD30 ligand, endostatin, HSP90α, LRIG3, MIP-4, pleiotrophin, PRKCI, RGM-C, SCF-sR, sL-selectin, and YES that discriminates NSCLC from controls with 91% sensitivity and 84% specificity in cross-validated training and 89% sensitivity and 83% specificity in a separate verification set, with similar performance for early and late stage NSCLC. CONCLUSIONS/SIGNIFICANCE: This study is a significant advance in clinical proteomics in an area of high unmet clinical need. Our analysis exceeds the breadth and dynamic range of proteome interrogated of previously published clinical studies of broad serum proteome profiling platforms including mass spectrometry, antibody arrays, and autoantibody arrays. The sensitivity and specificity of our 12-biomarker panel improves upon published protein and gene expression panels

  5. Optical nano and micro actuator technology

    CERN Document Server

    Knopf, George K

    2012-01-01

    In Optical Nano and Micro Actuator Technology, leading engineers, material scientists, chemists, physicists, laser scientists, and manufacturing specialists offer an in-depth, wide-ranging look at the fundamental and unique characteristics of light-driven optical actuators. They discuss how light can initiate physical movement and control a variety of mechanisms that perform mechanical work at the micro- and nanoscale. The book begins with the scientific background necessary for understanding light-driven systems, discussing the nature of light and the interaction between light and NEMS/MEMS d

  6. Integrating proteomic and functional genomic technologies in discovery-driven translational breast cancer research

    DEFF Research Database (Denmark)

    Celis, Julio E; Gromov, Pavel; Gromova, Irina

    2003-01-01

    The application of state-of-the-art proteomics and functional genomics technologies to the study of cancer is rapidly shifting toward the analysis of clinically relevant samples derived from patients, as the ultimate aim of translational research is to bring basic discoveries closer to the bedside....... Here we describe the essence of a long-term initiative undertaken by The Danish Centre for Translational Breast Cancer Research and currently underway for cancer biomarker discovery using fresh tissue biopsies and bio-fluids. The Centre is a virtual hub that brings together scientists working...

  7. A single lysis solution for the analysis of tissue samples by different proteomic technologies

    DEFF Research Database (Denmark)

    Gromov, P.; Celis, J.E.; Gromova, I.

    2008-01-01

    Cancer, being a major healthcare concern worldwide, is one of the main targets for the application of emerging proteomic technologies and these tools promise to revolutionize the way cancer will be diagnosed and treated in the near future. Today, as a result of the unprecedented advances that have...... dissease, is driving scientists to increasingly use clinically relevant samples for biomarker and target discovery. Tissues are heterogeneous and as a result optimization of sample preparation is critical for generating accurate, representative, and highly reproducible quantitative data. Although a large...

  8. Assessment of Label-Free Quantification in Discovery Proteomics and Impact of Technological Factors and Natural Variability of Protein Abundance.

    Science.gov (United States)

    Al Shweiki, Mhd Rami; Mönchgesang, Susann; Majovsky, Petra; Thieme, Domenika; Trutschel, Diana; Hoehenwarter, Wolfgang

    2017-04-07

    We evaluated the state of label-free discovery proteomics focusing especially on technological contributions and contributions of naturally occurring differences in protein abundance to the intersample variability in protein abundance estimates in this highly peptide-centric technology. First, the performance of popular quantitative proteomics software, Proteome Discoverer, Scaffold, MaxQuant, and Progenesis QIP, was benchmarked using their default parameters and some modified settings. Beyond this, the intersample variability in protein abundance estimates was decomposed into variability introduced by the entire technology itself and variable protein amounts inherent to individual plants of the Arabidopsis thaliana Col-0 accession. The technical component was considerably higher than the biological intersample variability, suggesting an effect on the degree and validity of reported biological changes in protein abundance. Surprisingly, the biological variability, protein abundance estimates, and protein fold changes were recorded differently by the software used to quantify the proteins, warranting caution in the comparison of discovery proteomics results. As expected, ∼99% of the proteome was invariant in the isogenic plants in the absence of environmental factors; however, few proteins showed substantial quantitative variability. This naturally occurring variation between individual organisms can have an impact on the causality of reported protein fold changes.

  9. Optical wireless communications an emerging technology

    CERN Document Server

    Capsoni, Carlo; Ghassemlooy, Zabih; Boucouvalas, Anthony; Udvary, Eszter

    2016-01-01

    This book focuses on optical wireless communications (OWC), an emerging technology with huge potential for the provision of pervasive and reliable next-generation communications networks. It shows how the development of novel and efficient wireless technologies can contribute to a range of transmission links essential for the heterogeneous networks of the future to support various communications services and traffic patterns with ever-increasing demands for higher data-transfer rates. The book starts with a chapter reviewing the OWC field, which explains different sub-technologies (visible-light, ultraviolet (UV) and infrared (IR) communications) and introduces the spectrum of application areas (indoor, vehicular, terrestrial, underwater, intersatellite, deep space, etc.). This provides readers with the necessary background information to understand the specialist material in the main body of the book, which is in four parts. The first of these deals with propagation modelling and channel characterization of ...

  10. Differential proteins of the optic ganglion in octopus vulgaris under methanol stress revealed using proteomics.

    Science.gov (United States)

    Huang, Lin; Huang, Qing-Yu; Chen, Hai-Bin; Huang, Fu-Sheng; Huang, He-Qing

    2011-10-01

    An analytical approach using the two-dimensional polyacrylamide gel electrophoresis (2D-PAGE) technique separated the proteome from the optic ganglia of Octopus vulgaris (OVOG). Approximately 600 protein spots were detected from the extraction when applying 150 μg protein to a 2D-PAGE gel in the pH range 5.0-8.0. Compared to the control, significant changes of 18 protein spots were observed in OVOG under the stress of native seawater containing 2% methanol for 72 h. Among these spots, we found that eight were down-regulated and ten were up-regulated in the gels, which were further identified using both peptide mass fingerprinting and database searches. Significant proteins such as glyceraldehyde-3-phosphate dehydrogenase, alpha subunit of succinyl-CoA synthetase, alcohol dehydrogenase, and long-chain specific acyl-CoA dehydrogenase were up-regulated proteins, whereas putative ABC transporter was a down -regulated protein. These differential proteins at the level of subcellular localization were further classified using LOCtree software with a hierarchical system of support vector machines. We found that most of the differential proteins in the gel could be identified as mitochondrial proteins, suggesting that these protective or marker proteins might help to prevent methanol poisoning via the mitochondria in the optical ganglia. The results indicated that both beta-tubulin and beta-actin were potential biomarkers as up-regulated proteins for monitoring methanol toxicosis associated with fish foods such as octopus and shark.

  11. Photonics technology development for optical fuzing

    Science.gov (United States)

    Geib, K. M.; Serkland, D. K.; Keeler, G. A.; Peake, G. M.; Mar, A.; von der Lippe, C. M.; Liu, J. J.

    2005-09-01

    This paper describes the photonic component development taking place at Sandia National Laboratories, ARDEC and the Army Research Laboratory in support of an effort to develop a robust, compact, and affordable photonic proximity sensor for munitions fuzing applications. Successful implementation of this sensor will provide a new capability for direct fire applications. The technologies under investigation for the optical fuze design covered in this paper are vertical-cavity surface-emitting lasers (VCSELs), vertical-external-cavity surface-emitting lasers (VECSELs), integrated resonant-cavity photodetectors (RCPDs), and refractive micro-optics. The culmination of this work will be low cost, robust, fully integrated, g-hardened components suitable for proximity fuzing applications. The use of advanced photonic components will enable replacement of costly assemblies that employ discrete lasers, photodetectors, and bulk optics. The integrated devices will be mass produced and impart huge savings for a variety of Army applications. The specific application under investigation is for gun-fired munitions. Nevertheless, numerous civilian uses exist for this proximity sensor in automotive, robotics and aerospace applications. This technology is also applicable to robotic ladar and short-range 3-D imaging.

  12. A brief examination of optical tagging technologies.

    Energy Technology Data Exchange (ETDEWEB)

    Ackermann, Mark R.; Cahill, Paul A. (Aspecular Optics, Dayton, OH); Drummond, Timothy J.; Wilcoxon, Jess Patrick

    2003-07-01

    Presented within this report are the results of a brief examination of optical tagging technologies funded by the Laboratory Directed Research and Development (LDRD) program at Sandia National Laboratories. The work was performed during the summer months of 2002 with total funding of $65k. The intent of the project was to briefly examine a broad range of approaches to optical tagging concentrating on the wavelength range between ultraviolet (UV) and the short wavelength infrared (SWIR, {lambda} < 2{micro}m). Tagging approaches considered include such things as simple combinations of reflective and absorptive materials closely spaced in wavelength to give a high contrast over a short range of wavelengths, rare-earth oxides in transparent binders to produce a narrow absorption line hyperspectral tag, and fluorescing materials such as phosphors, dies and chemically precipitated particles. One technical approach examined in slightly greater detail was the use of fluorescing nano particles of metals and semiconductor materials. The idea was to embed such nano particles in an oily film or transparent paint binder. When pumped with a SWIR laser such as that produced by laser diodes at {lambda}=1.54{micro}m, the particles would fluoresce at slightly longer wavelengths, thereby giving a unique signal. While it is believed that optical tags are important for military, intelligence and even law enforcement applications, as a business area, tags do not appear to represent a high on return investment. Other government agencies frequently shop for existing or mature tag technologies but rarely are interested enough to pay for development of an untried technical approach. It was hoped that through a relatively small investment of laboratory R&D funds, enough technologies could be identified that a potential customers requirements could be met with a minimum of additional development work. Only time will tell if this proves to be correct.

  13. Proteome-Wide Analysis of N-Glycosylation Stoichiometry Using SWATH Technology.

    Science.gov (United States)

    Yang, Xiangyun; Wang, Zhiyuan; Guo, Lin; Zhu, Zhengjiang; Zhang, Yaoyang

    2017-10-06

    N-glycosylation is a crucial post-translational modification (PTM) and plays essential roles in biological processes. Several methods have been developed for the relative quantification of N-glycosylation at the proteome scale. However, the proportion of N-glycosylated forms in a total protein population, or the "N-glycosylation stoichiometry", varies greatly among proteins or cellular states and is frequently missing due to the lack of robust technologies. In the present study, we developed a data-independent acquisition (DIA)-based strategy that enabled the in-depth measurement of N-glycosylation stoichiometry. A spectral library containing 3,509 N-glycosylated peptides and 17,525 fragment ions from human embryonic kidney cells 293 (HEK-293) cells was established from which the stoichiometries of 1,186 N-glycosites were calculated. These stoichiometric values differ greatly among different glycosites, and many glycosites tend to occur with low stoichiometry. We then investigated the N-glycosylation changes induced by tunicamycin in HEK-293 cells and by a temperature shift in Chinese hamster ovary (CHO) cells. Quantifying the proteome, N-glycoproteome, and N-glycosylation stoichiometry demonstrated that the regulation of N-glycosylation is primarily achieved by adjusting the N-glycosylation stoichiometry. In total, the stoichiometries of 2,274 glycosites were determined in the current study. Notably, our approach can be applied to other biological systems and other types of PTMs.

  14. Identifying Predictors of Taxane-Induced Peripheral Neuropathy Using Mass Spectrometry-Based Proteomics Technology.

    Directory of Open Access Journals (Sweden)

    Emily I Chen

    Full Text Available Major advances in early detection and therapy have significantly increased the survival of breast cancer patients. Unfortunately, most cancer therapies are known to carry a substantial risk of adverse long-term treatment-related effects. Little is known about patient susceptibility to severe side effects after chemotherapy. Chemotherapy-induced peripheral neuropathy (CIPN is a common side effect of taxanes. Recent advances in genome-wide genotyping and sequencing technologies have supported the discoveries of a number of pharmacogenetic markers that predict response to chemotherapy. However, effectively implementing these pharmacogenetic markers in the clinic remains a major challenge. On the other hand, recent advances in proteomic technologies incorporating mass spectrometry (MS for biomarker discovery show great promise to provide clinically relevant protein biomarkers. In this study, we evaluated the association between protein content in serum exosomes and severity of CIPN. Women with early stage breast cancer receiving adjuvant taxane chemotherapy were assessed with the FACT-Ntx score and serum was collected before and after the taxane treatment. Based on the change in FACT-Ntx score from baseline to 12 month follow-up, we separated patients into two groups: those who had no change (Group 1, N = 9 and those who had a ≥20% worsening (Group 1, N = 8. MS-based proteomics technology was used to identify proteins present in serum exosomes to determine potential biomarkers. Mann-Whitney-Wilcoxon analysis was applied and maximum FDR was controlled at 20%. From the serum exosomes derived from this cohort, we identified over 700 proteins known to be in different subcellular locations and have different functions. Statistical analysis revealed a 12-protein signature that resulted in a distinct separation between baseline serum samples of both groups (q<0.2 suggesting that the baseline samples can predict subsequent neurotoxicity. These toxicity

  15. Recent progress on planar lightwave circuit technology for optical communication

    Science.gov (United States)

    Takahashi, Hiroshi

    2009-11-01

    Silica waveguide planar lightwave circuit (PLC) technology is very useful for fabricating compact and high performance optical devices for optical communication. Wavelength multiplexers and optical switches for ROADM and OXC are still being developed to improve performance further. New devices for an advanced modulation format can also be fabricated with PLC technology.

  16. Optical microsystems based on a nanomaterial technology

    Energy Technology Data Exchange (ETDEWEB)

    De Stefano, L [National Council of Research-Institute for Microelectronic and Microsystems-Department of Naples, Via P Castellino 111, 80131 Naples (Italy); Rotiroti, L [National Council of Research-Institute for Microelectronic and Microsystems-Department of Naples, Via P Castellino 111, 80131 Naples (Italy); Rea, I [National Council of Research-Institute for Microelectronic and Microsystems-Department of Naples, Via P Castellino 111, 80131 Naples (Italy); Iodice, M [National Council of Research-Institute for Microelectronic and Microsystems-Department of Naples, Via P Castellino 111, 80131 Naples (Italy); Rendina, I [National Council of Research-Institute for Microelectronic and Microsystems-Department of Naples, Via P Castellino 111, 80131 Naples (Italy)

    2007-10-03

    In this work, we present an optical sensor for quantitative determination of the alcohol content in hydro-alcohol mixtures, realized by using porous silicon (PSi) nanotechnology. The device is an oxidized PSi micro-cavity (PSMC) constituted by a Fabry-Perot layer between two distributed Bragg reflectors. Due to the capillary condensation, a red shift of the PSMC reflectivity spectrum is observed on exposure to vapour mixtures. The phenomenon is completely reversible. Moreover, to reduce the analysis time, we have designed the integration of the sensor in a thermally controlled lab-on-chip, by merging PSi and anodic bonding technologies. Numerical calculations have been performed to study the thermal behaviour of the integrated device.

  17. Proteomics of the Peroxisome

    OpenAIRE

    2006-01-01

    Genomes provide us with a blue print for the potential of a cell. However, the activity of a cell is expressed in its proteome. Full understanding of the complexity of cells demands a comprehensive view of the proteome; its interactions, activity states and organization. Comprehensive proteomic approaches applied to peroxisomes have yielded new insights into the organelle and its dynamic interplay with other cellular structures. As technologies and methodologies improve proteomics hold the pr...

  18. Broadband access technology for passive optical network

    Science.gov (United States)

    Chi, Sien; Yeh, Chien-Hung; Chow, Chi-Wai

    2009-01-01

    We will introduce four related topics about fiber access network technologies for PONs. First, an upstream signal powerequalizer is proposed and designed using a FP-LD in optical line terminal applied to the TDM-PON, and a 20dB dynamic upstream power range from -5 to -25dBm having a 1.7dB maximal power variation is retrieved. The fiber-fault protection is also an important issue for PON. We investigate a simple and cost-effective TDM/WDM PON system with self-protected function. Next, using RSOA-based colorless WDM-PON is also demonstrated. We propose a costeffective CW light source into RSOA for 2.5Gb/s upstream in WDM-PON together with self-healing mechanism against fiber fault. Finally, we investigate a 4Gb/s OFDM-QAM for both upstream and downstream traffic in long-reach WDM/TDM PON system under 100km transmission without dispersion compensation. As a result, we believe that these key access technologies are emerging and useful for the next generation broadband FTTH networks.

  19. Optical fiber sensing technology in the pipeline industry

    Energy Technology Data Exchange (ETDEWEB)

    Braga, A.M.B.; Llerena, R.W.A. [Pontificia Univ. Catolica do Rio de Janeiro, RJ (Brazil). Dept. de Engenharia Mecanica]. E-mail: abraga@mec.puc-rio.br; roberan@mec.puc-rio.br; Valente, L.C.G.; Regazzi, R.D. [Gavea Sensors, Rio de Janeiro, RJ (Brazil)]. E-mail: guedes@gaveasensors.com; regazzi@gaveasensors.com

    2003-07-01

    This paper is concerned with applications of optical fiber sensors to pipeline monitoring. The basic principles of optical fiber sensors are briefly reviewed, with particular attention to fiber Bragg grating technology. Different potential applications in the pipeline industry are discussed, and an example of a pipeline strain monitoring system based on optical fiber Bragg grating sensors is presented. (author)

  20. Cognitive Heterogeneous Reconfigurable Optical Networks (CHRON): Enabling Technologies and Techniques

    DEFF Research Database (Denmark)

    Tafur Monroy, Idelfonso; Zibar, Darko; Guerrero Gonzalez, Neil;

    2011-01-01

    We present the approach of cognition applied to heterogeneous optical networks developed in the framework of the EU project CHRON: Cognitive Heterogeneous Reconfigurable Optical Network. We introduce and discuss in particular the technologies and techniques that will enable a cognitive optical ne...

  1. SiON technology for integrated optical sensors

    NARCIS (Netherlands)

    Lambeck, P.V.; Wörhoff, Kerstin; Righini, Giancarlo C.

    2002-01-01

    Silicon oxynitride (SiON)- technology has been widely accepted for realizing integrated optical devices for application in optical telecommunication. Some of the severe requirements put in this field to devices and hence to technology are more relaxed in sensing applications, but other ones pop up i

  2. Domestic Enterprise Awarded Overseas Patents On Fiber Optical Technologies

    Institute of Scientific and Technical Information of China (English)

    2009-01-01

    Beijing Aerospace Times Optical-Electronic Technology Corp. Ltd was granted a patent for a fiber optical gyroscope using a low-polarization and polarization-maintaining hybrid light path in Ukraine. After filling an ordinary patent application for the technology domestically in 2006, the company filed a Paris Convention application in Ukraine to collaborate with a Ukrainian technical center in 2007.

  3. Preparing the optics technology to observe the hot universe

    DEFF Research Database (Denmark)

    Bavdaz, M.; Wille, Eric; Wallace, Kotska;

    2014-01-01

    is the Silicon Pore Optics (SPO) [1 to 23], a modular X-ray optics technology, which utilises processes and equipment developed for the semiconductor industry. The paper provides an overview of the programmatic background, the status of SPO technology and gives an outline of the development roadmap...... and activities undertaken and planned by ESA on optics, coatings [24 to 30] and test facilities [31, 33]....

  4. Label-controlled optical packet routing technologies and applications

    DEFF Research Database (Denmark)

    Koonen, A.M.J.; Yan, N.; Vegas Olmos, Juan José;

    2007-01-01

    An overview is given of various optical packet labeling techniques. The architecture and technologies are discussed for optical packet routing nodes using orthogonal labeling with optoelectronic label processing, and for nodes using time-serial labeling with all-optical time-serial label processing....... An example of a nearterm application is given, and a comparison of routing technologies is made regarding their cost and reliability aspects....

  5. Hands-on workshops as an effective means of learning advanced technologies including genomics, proteomics and bioinformatics.

    Science.gov (United States)

    Reisdorph, Nichole; Stearman, Robert; Kechris, Katerina; Phang, Tzu Lip; Reisdorph, Richard; Prenni, Jessica; Erle, David J; Coldren, Christopher; Schey, Kevin; Nesvizhskii, Alexey; Geraci, Mark

    2013-12-01

    Genomics and proteomics have emerged as key technologies in biomedical research, resulting in a surge of interest in training by investigators keen to incorporate these technologies into their research. At least two types of training can be envisioned in order to produce meaningful results, quality publications and successful grant applications: (1) immediate short-term training workshops and (2) long-term graduate education or visiting scientist programs. We aimed to fill the former need by providing a comprehensive hands-on training course in genomics, proteomics and informatics in a coherent, experimentally-based framework. This was accomplished through a National Heart, Lung, and Blood Institute (NHLBI)-sponsored 10-day Genomics and Proteomics Hands-on Workshop held at National Jewish Health (NJH) and the University of Colorado School of Medicine (UCD). The course content included comprehensive lectures and laboratories in mass spectrometry and genomics technologies, extensive hands-on experience with instrumentation and software, video demonstrations, optional workshops, online sessions, invited keynote speakers, and local and national guest faculty. Here we describe the detailed curriculum and present the results of short- and long-term evaluations from course attendees. Our educational program consistently received positive reviews from participants and had a substantial impact on grant writing and review, manuscript submissions and publications.

  6. Overview of fiber optics technology :industrial and military

    OpenAIRE

    Derrington, Dolores Cormack

    1989-01-01

    Fiber optics technology is being used in many applications, both in the military world and in the industrial world. A broad overview of this technology is provided, including a discussion of the fundamentals of fiber operation and component characteristics. Applications of fiber optics in both military and industrial communities is addressed, identifying specific examples in both cases. In addition, market projections and technology trends are discussed for both the milit...

  7. Single Cell Functional Proteomics for Monitoring Immune Response in Cancer Therapy: Technology, Methods and Applications

    Directory of Open Access Journals (Sweden)

    Chao eMa

    2013-05-01

    Full Text Available In the past decade, significant progresses have taken place in the field of cancer immunotherapeutics, which are being developed for most human cancers. New immunotherapeutics, such as Ipilimumab (anti-CTLA-4, have been approved for clinical treatment; cell-based immunotherapies such as adoptive cell transfer (ACT have either passed the final stage of human studies (i.e., sipuleucel-T for the treatment of selected neoplastic malignancies or reached the stage of phase II/III clinical trials. Immunotherapetics has become a sophisticated field. Multimodal therapeutic regimens comprising several functional modules (up to 5 in the case of ACT have been developed to provide focused therapeutic responses with improved efficacy and reduced side-effects. However, a major challenge remains: the lack of effective and clinically-applicable immune assessment methods. Due to the complexity of antitumor immune responses within patients, it is difficult to provide comprehensive assessment of therapeutic efficacy and mechanism. To address this challenge, new technologies have been developed to directly profile the cellular immune functions and the functional heterogeneity. With the goal to measure the functional proteomics of single immune cells, these technologies are informative, sensitive, high-throughput and highly-multiplex. They have been used to uncover new knowledge of cellular immune functions and have be utilized for rapid, informative, and longitudinal monitoring of immune response in clinical anti-cancer treatment. In addition, new computational tools are required to integrate high dimensional data sets generated from the comprehensive, single-cell level measurements of patient’s immune responses to guide accurate and definitive diagnostic decision. These single-cell immune function assessment tools will likely contribute to new understanding of therapy mechanism, pre-treatment stratification of patients and ongoing therapeutic monitoring and

  8. Alternative high-resolution lithographic technologies for optical applications

    Science.gov (United States)

    Zeitner, Uwe D.; Weichelt, Tina; Bourgin, Yannick; Kinder, Robert

    2016-03-01

    Modern optical applications have special demands on the lithographic fabrication technologies. This relates to the lateral shape of the structures as well as to their three dimensional surface profile. On the other hand optical nano-structures are often periodic which allows for the use of dedicated lithographic exposure principles. The paper briefly reviews actual developments in the field of optical nano-structure generation. Special emphasis will be given to two technologies: electron-beam lithography based on a flexible cell-projection method and the actual developments in diffractive mask aligner lithography. Both offer a cost effective fabrication alternative for high resolution structures or three-dimensional optical surface profiles.

  9. Optical Parametric Technology for Methane Measurements

    Science.gov (United States)

    Dawsey, Martha; Numata, Kenji; Wu, Stewart; Riris, Haris

    2015-01-01

    Atmospheric methane (CH4) is the second most important anthropogenic greenhouse gas, with approximately 25 times the radiative forcing of carbon dioxide (CO2) per molecule. Yet, lack of understanding of the processes that control CH4 sources and sinks and its potential release from stored carbon reservoirs contributes significant uncertainty to our knowledge of the interaction between carbon cycle and climate change. At Goddard Space Flight Center (GSFC) we have been developing the technology needed to remotely measure CH4 from orbit. Our concept for a CH4 lidar is a nadir viewing instrument that uses the strong laser echoes from the Earth's surface to measure CH4. The instrument uses a tunable, narrow-frequency light source and photon-sensitive detector to make continuous measurements from orbit, in sunlight and darkness, at all latitudes and can be relatively immune to errors introduced by scattering from clouds and aerosols. Our measurement technique uses Integrated Path Differential Absorption (IPDA), which measures the absorption of laser pulses by a trace gas when tuned to a wavelength coincident with an absorption line. We have already demonstrated ground-based and airborne CH4 detection using Optical Parametric Amplifiers (OPA) at 1651 nm using a laser with approximately 10 microJ/pulse at 5kHz with a narrow linewidth. Next, we will upgrade our OPO system to add several more wavelengths in preparation for our September 2015 airborne campaign, and expect that these upgrades will enable CH4 measurements with 1% precision (10-20 ppb).

  10. Optical parametric technology for methane measurements

    Science.gov (United States)

    Dawsey, Martha; Numata, Kenji; Wu, Stewart; Riris, Haris

    2015-09-01

    Atmospheric methane (CH4) is the second most important anthropogenic greenhouse gas, with approximately 25 times the radiative forcing of carbon dioxide (CO2) per molecule. Yet, lack of understanding of the processes that control CH4 sources and sinks and its potential release from stored carbon reservoirs contributes significant uncertainty to our knowledge of the interaction between carbon cycle and climate change. At Goddard Space Flight Center (GSFC) we have been developing the technology needed to remotely measure CH4 from orbit. Our concept for a CH4 lidar is a nadir viewing instrument that uses the strong laser echoes from the Earth's surface to measure CH4. The instrument uses a tunable, narrow-frequency light source and photon-sensitive detector to make continuous measurements from orbit, in sunlight and darkness, at all latitudes and can be relatively immune to errors introduced by scattering from clouds and aerosols. Our measurement technique uses Integrated Path Differential Absorption (IPDA), which measures the absorption of laser pulses by a trace gas when tuned to a wavelength coincident with an absorption line. We have already demonstrated ground-based and airborne CH4 detection using Optical Parametric Amplifiers (OPA) at 1651 nm using a laser with approximately 10 μJ/pulse at 5kHz with a narrow linewidth. Next, we will upgrade our OPO system to add several more wavelengths in preparation for our September 2015 airborne campaign, and expect that these upgrades will enable CH4 measurements with 1% precision (10-20 ppb).

  11. Proteomics Core

    Data.gov (United States)

    Federal Laboratory Consortium — Proteomics Core is the central resource for mass spectrometry based proteomics within the NHLBI. The Core staff help collaborators design proteomics experiments in a...

  12. Proteomics Core

    Data.gov (United States)

    Federal Laboratory Consortium — Proteomics Core is the central resource for mass spectrometry based proteomics within the NHLBI. The Core staff help collaborators design proteomics experiments in...

  13. Polyguide polymeric technology for optical interconnect circuits and components

    Science.gov (United States)

    Booth, Bruce L.; Marchegiano, Joseph E.; Chang, Catherine T.; Furmanak, Robert J.; Graham, Douglas M.; Wagner, Richard G.

    1997-04-01

    The expanding information revolution has been made possible by the development of optical communication technology. To meet the escalating demand for information transmitted and processed at high data rates and the need to circumvent the growing electronic circuit bottlenecks, mass deployment of not only optical fiber networks but manufacturable optical interconnect circuits, components and connectors for interfacing fibers and electronics that meet economic and performance constraints are absolutely necessary. Polymeric waveguide optical interconnection are considered increasingly important to meet these market needs. DuPont's polyguide polymeric integrated optic channel waveguide system is thought by many to have considerable potential for a broad range of passive optical interconnect applications. In this paper the recent advances, status, and unique attributes of the technology are reviewed. Product and technology developments currently in progress including parallel optical ink organization and polymer optical interconnect technology developments funded by DARPA are used as examples to describe polyguide breadth and potential for manufacture and deployment of optical interconnection products for single and multimode telecom and datacom waveguide applications.

  14. Understanding the complex nature of salinity and drought-stress response in cereals using proteomics technologies.

    Science.gov (United States)

    Ngara, Rudo; Ndimba, Bongani K

    2014-03-01

    Worldwide, crop productivity is drastically reduced by drought and salinity stresses. In order to develop food crops with increased productivity in marginal areas, it is important to first understand the nature of plant stress response mechanisms. In the past decade, proteomics tools have been extensively used in the study of plants' proteome responses under experimental conditions mimicking drought and salinity stresses. A lot of proteomic data have been generated using different experimental designs. However, the precise roles of these proteins in stress tolerance are yet to be elucidated. This review summarises the applications of proteomics in understanding the complex nature of drought and salinity stress effects on plants, particularly cereals and also highlights the usefulness of sorghum as the next logical model crop for use in understanding drought and salinity tolerance in cereals. With the vast amount of proteomic data that have been generated to date, a call for integrated efforts across the agricultural, biotechnology, and molecular biology sectors is also highlighted in an effort to translate proteomics data into increased food productivity for the world's growing population.

  15. Fabrication Technology for X-Ray Optics and Mandrels Project

    Data.gov (United States)

    National Aeronautics and Space Administration — NASA has a cross-project need for large format aspheric x-ray optics, which, demonstrate exceptionally low periodic surface errors. Available technologies to both...

  16. New and improved proteomics technologies for understanding complex biological systems: addressing a grand challenge in the life sciences.

    Science.gov (United States)

    Hood, Leroy E; Omenn, Gilbert S; Moritz, Robert L; Aebersold, Ruedi; Yamamoto, Keith R; Amos, Michael; Hunter-Cevera, Jennie; Locascio, Laurie

    2012-09-01

    This White Paper sets out a Life Sciences Grand Challenge for Proteomics Technologies to enhance our understanding of complex biological systems, link genomes with phenotypes, and bring broad benefits to the biosciences and the US economy. The paper is based on a workshop hosted by the National Institute of Standards and Technology (NIST) in Gaithersburg, MD, 14-15 February 2011, with participants from many federal R&D agencies and research communities, under the aegis of the US National Science and Technology Council (NSTC). Opportunities are identified for a coordinated R&D effort to achieve major technology-based goals and address societal challenges in health, agriculture, nutrition, energy, environment, national security, and economic development.

  17. Precision molding of advanced glass optics: innovative production technology for lens arrays and free form optics

    Science.gov (United States)

    Pongs, Guido; Bresseler, Bernd; Bergs, Thomas; Menke, Gert

    2012-10-01

    Today isothermal precision molding of imaging glass optics has become a widely applied and integrated production technology in the optical industry. Especially in consumer electronics (e.g. digital cameras, mobile phones, Blu-ray) a lot of optical systems contain rotationally symmetrical aspherical lenses produced by precision glass molding. But due to higher demands on complexity and miniaturization of optical elements the established process chain for precision glass molding is not sufficient enough. Wafer based molding processes for glass optics manufacturing become more and more interesting for mobile phone applications. Also cylindrical lens arrays can be used in high power laser systems. The usage of unsymmetrical free-form optics allows an increase of efficiency in optical laser systems. Aixtooling is working on different aspects in the fields of mold manufacturing technologies and molding processes for extremely high complex optical components. In terms of array molding technologies, Aixtooling has developed a manufacturing technology for the ultra-precision machining of carbide molds together with European partners. The development covers the machining of multi lens arrays as well as cylindrical lens arrays. The biggest challenge is the molding of complex free-form optics having no symmetrical axis. A comprehensive CAD/CAM data management along the entire process chain is essential to reach high accuracies on the molded lenses. Within a national funded project Aixtooling is working on a consistent data handling procedure in the process chain for precision molding of free-form optics.

  18. NIF Optical Materials and Fabrication Technologies: An Overview

    Energy Technology Data Exchange (ETDEWEB)

    Campbell, J H; Hawley-Fedder, R; Stolz, C J; Menapace, J A; Borden, M R; Whitman, P; Yu, J; Runkel, M; Riley, M; Feit, M; Hackel, R

    2004-02-23

    The high-energy/high-power section of the NIF laser system contains 7360 meter-scale optics. Advanced optical materials and fabrication technologies needed to manufacture the NIF optics have been developed and put into production at key vendor sites. Production rates are up to 20 times faster and per-optic costs 5 times lower than could be achieved prior to the NIF. In addition, the optics manufactured for NIF are better than specification giving laser performance better than the design. A suite of custom metrology tools have been designed, built and installed at the vendor sites to verify compliance with NIF optical specifications. A brief description of the NIF optical wavefront specifications for the glass and crystal optics is presented. The wavefront specifications span a continuous range of spatial scale-lengths from 10 {micro}m to 0.5 m (full aperture). We have continued our multi-year research effort to improve the lifetime (i.e. damage resistance) of bulk optical materials, finished optical surfaces and multi-layer dielectric coatings. New methods for post-processing the completed optic to improve the damage resistance have been developed and made operational. This includes laser conditioning of coatings, glass surfaces and bulk KDP and DKDP and well as raster and full aperture defect mapping systems. Research on damage mechanisms continues to drive the development of even better optical materials.

  19. NIF optical materials and fabrication technologies: an overview

    Science.gov (United States)

    Campbell, John H.; Hawley-Fedder, Ruth A.; Stolz, Christopher J.; Menapace, Joseph A.; Borden, Michael R.; Whitman, Pamela K.; Yu, June; Runkel, Michael J.; Riley, Michael O.; Feit, Michael D.; Hackel, Richard P.

    2004-05-01

    The high-energy/high-power section of the NIF laser system contains 7360 meter-scale optics. Advanced optical materials and fabrication technologies needed to manufacture the NIF optics have been developed and put into production at key vendor sites. Production rates are up to 20 times faster and per-optic costs 5 times lower than could be achieved prior to the NIF. In addition, the optics manufactured for NIF are better than specification giving laser performance better than the design. A suite of custom metrology tools have been designed, built and installed at the vendor sites to verify compliance with NIF optical specifications. A brief description of the NIF optical wavefront specifications for the glass and crystal optics is presented. The wavefront specifications span a continuous range of spatial scale-lengths from 10 μm to 0.5 m (full aperture). We have continued our multi-year research effort to improve the lifetime (i.e. damage resistance) of bulk optical materials, finished optical surfaces and multi-layer dielectric coatings. New methods for post-processing the completed optic to improve the damage resistance have been developed and made operational. This includes laser conditioning of coatings, glass surfaces and bulk KDP and DKDP and well as raster and full aperture defect mapping systems. Research on damage mechanisms continues to drive the development of even better optical materials.

  20. A preliminary screening study on the associated proteins in human psoriasis vulgaris by serum proteomics technologies

    Institute of Scientific and Technical Information of China (English)

    Zhankui Liu; Shengshun Tan; Chunshui Yu; Jinghua Fan; Zhuanli Bai; Junjie Li

    2007-01-01

    Objective:To investigate the optimum screening conditions of associated proteins in human psoriasis vulgaris by serum proteomics technique, and to screen the different expression proteins related with psoriasis vulgaris. Methods:Serum samples of peripheral blood were collected from newly diagnosed psoriasis vulgaris patients in the clinic, and 20 matched healthy persons.Serum albumin IgG was removed by filtering with ProteoExtract Albumin/IgG. After comparative proteomics analysis the different protein spots were identified using 2-DE and MS. Results :Electrophoresis figures with high resolution and reproducibility were obtained. Three different expression proteins were found only in the serum from psoriasis vulgaris patients,while nine other different proteins expressing from healthy volunteers. Conclusion:The protein expression was different in the serum between the psoriasis vulgaris patients and healthy volunteers. It was hoped that we could find the biomarkers related to psoriasis vulgaris by using proteomics.

  1. New Optical Link Technologies for HEP Experiments

    CERN Document Server

    Delurgio, P; Salvachua, B; Lopez, D; Stanek, R; Underwood, D

    2011-01-01

    As a concern with the reliability and mass of current optical links in LHC experiments, we are investigating CW lasers and light modulators as an alternative to VCSELs. In addition we are developing data links in air, utilizing steering by MEMS mirrors and optical feedback paths for the control loop. Laser, modulator, and lens systems used are described, as well as two different electronic systems for a free space steering feedback loop. Our prototype system currently operates at 1.25 Gb/s, but could be upgraded. This link works over distances of order meters. Such links might enable one to move communication lasers (e.g. VCSELs) and optical fibers out of tracking detectors, for reasons such as reliability and power consumption. Some applications for free space data links, such as local triggering and data readout and trigger-clock distribution and links for much longer distances are also discussed.

  2. Optical coherent technologies in next generation access networks

    Science.gov (United States)

    Iwatsuki, Katsumi; Tsukamoto, Katsutoshi

    2012-01-01

    This paper reviews optical coherent technologies in next generation access networks with the use of radio over fiber (RoF), which offer key enabling technologies of wired and wireless integrated and/or converged broadband access networks to accommodate rapidly widespread cloud computing services. We describe technical issues on conventional RoF based on subcarrier modulation (SCM) and their countermeasures. Two examples of RoF access networks with optical coherent technologies to solve the technical issues are introduced; a video distribution system with FM conversion and wired and wireless integrated wide-area access network with photonic up- and down-conversion.

  3. Effect of technological parameters on optical performance of fiber coupler

    Institute of Scientific and Technical Information of China (English)

    SHUAI Ci-jun; DUAN Ji-an; ZHONG Jue

    2007-01-01

    To find out the influence of technological parameters on optical performance of fused optical fiber device, the fiber coupler was served as subject investigated by using the fused biconical taper machining as experimental setup. Fused fiber coupler's optical performances such as insertion loss, excess loss, directivity and uniformity were tested with the optical test system that was constituted of tunable laser and optical spectrum analyzer. Especially the relationship between optical performance and drawing speed was investigated. The experimental results show that the optical performance is closely related to process conditions. At fused temperature of 1 200℃, there exists a drawing speed of 150 μm/s, which makes the device's performance optimum. Out of this speed region, the optical performance drops quickly. At drawing speed of 200 tm/s, the excess loss is relatively small when the fused temperature is above 1 200℃. So the technological parameters have close relationship with optical performance of the coupler, and the good performance coupler can't get until the drawing speed and fused temperature match accurately.

  4. Korea-China Optical Technology Research Centre Project

    Energy Technology Data Exchange (ETDEWEB)

    Kim, Cheol Jung; Rhee, Y. J.; Jung, D. Y. and others

    2004-06-15

    The main objectives of this project are to establish the international collaboration basis of optical technologies between Korea and China. The combination of the Chinese advanced fundamental technologies with the Korean industrialization and commercialization infrastructures is realized, by ways of exchanging scientists and informations, holding joint seminars, cooperative utilization of research resources. On the ground of this establishment, the optical technologies of Korea are supposed to be leveled up to those of the world-most advanced. At the same time, for the improvement of mutual benefit and financial profit of both countries, providing technical advice and suggestions to the optical industries in the two countries is an another goal of this project. The state-of-the-arts of the Chinese technologies such as aerospace engineering, military defence technology, medical technology, laser fusion research, and so on, are known to be far above those of Korean and up to one of the most advanced in the world. Thus it is thought to be necessary that the acquisition of these technologies, implementation of joint research projects for technology development as well as the balanced opportunities for commercial product/sales and cooperation should be actively pursued in order to enhance the levels of Korean technologies in these fields.

  5. Deep imaging: how much of the proteome does current top-down technology already resolve?

    Directory of Open Access Journals (Sweden)

    Elise P Wright

    Full Text Available Effective proteome analyses are based on interplay between resolution and detection. It had been claimed that resolution was the main factor limiting the use of two-dimensional gel electrophoresis. Improved protein detection now indicates that this is unlikely to be the case. Using a highly refined protocol, the rat brain proteome was extracted, resolved, and detected. In order to overcome the stain saturation threshold, high abundance protein species were excised from the gel following standard imaging. Gels were then imaged again using longer exposure times, enabling detection of lower abundance, less intensely stained protein species. This resulted in a significant enhancement in the detection of resolved proteins, and a slightly modified digestion protocol enabled effective identification by standard mass spectrometric methods. The data indicate that the resolution required for comprehensive proteome analyses is already available, can assess multiple samples in parallel, and preserve critical information concerning post-translational modifications. Further optimization of staining and detection methods promises additional improvements to this economical, widely accessible and effective top-down approach to proteome analysis.

  6. Technological advances for deciphering the complexity of psychiatric disorders: merging proteomics with cell biology.

    Science.gov (United States)

    Wesseling, Hendrik; Guest, Paul C; Lago, Santiago G; Bahn, Sabine

    2014-08-01

    Proteomic studies have increased our understanding of the molecular pathways affected in psychiatric disorders. Mass spectrometry and two-dimensional gel electrophoresis analyses of post-mortem brain samples from psychiatric patients have revealed effects on synaptic, cytoskeletal, antioxidant and mitochondrial protein networks. Multiplex immunoassay profiling studies have found alterations in hormones, growth factors, transport and inflammation-related proteins in serum and plasma from living first-onset patients. Despite these advances, there are still difficulties in translating these findings into platforms for improved treatment of patients and for discovery of new drugs with better efficacy and side effect profiles. This review describes how the next phase of proteomic investigations in psychiatry should include stringent replication studies for validation of biomarker candidates and functional follow-up studies which can be used to test the impact on physiological function. All biomarker candidates should now be tested in series with traditional and emerging cell biological approaches. This should include investigations of the effects of post-translational modifications, protein dynamics and network analyses using targeted proteomic approaches. Most importantly, there is still an urgent need for development of disease-relevant cellular models for improved translation of proteomic findings into a means of developing novel drug treatments for patients with these life-altering disorders.

  7. Application of high-throughput technologies to a structural proteomics-type analysis of Bacillus anthracis

    NARCIS (Netherlands)

    Au, K.; Folkers, G.E.; Kaptein, R.

    2006-01-01

    A collaborative project between two Structural Proteomics In Europe (SPINE) partner laboratories, York and Oxford, aimed at high-throughput (HTP) structure determination of proteins from Bacillus anthracis, the aetiological agent of anthrax and a biomedically important target, is described. Based up

  8. Development of Advanced Technologies for Complete Genomic and Proteomic Characterization of Quantized Human Tumor Cells

    Science.gov (United States)

    2014-07-01

    four parental cell lines and eleven subclones derived (Figure 11). We have begun deep proteome analysis of the secretomes by performing off- gel ...1 Antihelminthic 33 7 7 Antiarrhythmic 24 0 1 Antibacterial 227 11 11 Antifungal 55 5 5 Antineoplastic 115 29 28 Antihyperlipidemic 12 3 4

  9. Recent developments in optical neuromodulation technologies

    NARCIS (Netherlands)

    Kos, A.; Loohuis, N.F.; Glennon, J.C.; Celikel, T.; Martens, G.J.M.; Tiesinga, P.H.E.; Aschrafi, A.

    2013-01-01

    The emergence of optogenetics technology facilitated widespread applications for interrogation of complex neural networks, such as activation of specific axonal pathways, previously found impossible with electrical stimulation. Consequently, within the short period of its application in neuroscience

  10. Extremely Lightweight Segmented Membrane Optical Shell Fabrication Technology for Future IR to Optical Telescope Project

    Data.gov (United States)

    National Aeronautics and Space Administration — We propose that the Membrane Optical Shell Technology (MOST) substrate fabrication approach be extended with a specific focus on advanced off-axis very light weight,...

  11. Platelet proteomics.

    Science.gov (United States)

    Zufferey, Anne; Fontana, Pierre; Reny, Jean-Luc; Nolli, Severine; Sanchez, Jean-Charles

    2012-01-01

    Platelets are small cell fragments, produced by megakaryocytes, in the bone marrow. They play an important role in hemostasis and diverse thrombotic disorders. They are therefore primary targets of antithrombotic therapies. They are implicated in several pathophysiological pathways, such as inflammation or wound repair. In blood circulation, platelets are activated by several pathways including subendothelial matrix and thrombin, triggering the formation of the platelet plug. Studying their proteome is a powerful approach to understand their biology and function. However, particular attention must be paid to different experimental parameters, such as platelet quality and purity. Several technologies are involved during the platelet proteome processing, yielding information on protein identification, characterization, localization, and quantification. Recent technical improvements in proteomics combined with inter-disciplinary strategies, such as metabolomic, transcriptomics, and bioinformatics, will help to understand platelets biological mechanisms. Therefore, a comprehensive analysis of the platelet proteome under different environmental conditions may contribute to elucidate complex processes relevant to platelet function regarding bleeding disorders or platelet hyperreactivity and identify new targets for antiplatelet therapy.

  12. An ultra-fast optical header replacement technology and its application for broadband optical packet switch

    NARCIS (Netherlands)

    Tian, B.; van Etten, Wim; Beuwer, W.A.M.; Thienpont, H.; Berghmans, F.; Danckaert, J.; Desmet, L.

    2001-01-01

    An optical header replacement technology based on Self Electro-optic Effect Devices (SEEDs) is presented. By using the measurement result of a 75 μm long SEED device, we simulate an 8 Gbps throughput is achievable. Based on the switching characteristics of SEEDs, we proposed several methods to impro

  13. Military Applications of Fiber Optics Technology

    Science.gov (United States)

    1989-05-01

    I. P., D. Marcuse , and H.M. Presby, "Multimode Fiber Bandwidth: Theory and Practice," Proceedings of the IEEE, Vol. 68 , No. 10, October 1980, pp...Li, Tingye, "Structures, Parameters, and Transmission Properties of Optical Fibers," Proceedings of the IEEE, Vol. 68 , No. 10, October 1980, pp. 1175...121. Sigel, George H., Jr., "Fiber Transmission Losses in High-Radiation Fields," Proceedings of the IEEE, Vol. 68 , No. 10, October 1980, pp. 1236

  14. MPACVD processing technologies for planar integrated optics

    Science.gov (United States)

    Li, Cheng-Chung; Boudreau, Robert A.; Bowen, Terry P.

    1998-06-01

    Optical circuits based on low-loss glass waveguide are the practical and promising approaches to integrate different functional components for optical communication system. Microwave plasma assisted chemical vapor deposition produces superior quality, low birefringence, low-loss, planar waveguides for integrated optical devices. A microwave plasma initiates the chemical vapor of SiCl4, GeCl4 and oxygen. A Ge-doped silica layer thus deposited on the substrates with reasonable high growth rate. Film properties are based on various parameters, such as chemical flow rates, chamber pressure and temperature, power level and injector design. The main emphasis has been on optimizing the deposition parameters and reproducibility. An uniform, low-loss film can be made by properly balancing the precursor flows. The refractive index of deposited film can also be controlled by adjusting the flow ratio of SiCl4 and GeCl4 bubblers. Deposited films was characterized by prism coupler, loss measurement, residual stress, and composition analysis. The resulted refractive index step can be varied between 1.46 to 1.60. Waveguide can be fabricated with any desired refractive index profile. Standard photolithography defines the waveguide pattern on mask layer. Core layer was remove by the plasma dry etch which has been investigated by both reactive ion etch (RIE) and inductively coupled plasma etch. Etch rate of 3000-4000 angstrom/min has been achieved by using ICP compared to typical etch rate of 200-300 angstrom/min by using conventional RIE.

  15. The Role of Proteomics in the Diagnosis and Treatment of Women's Cancers: Current Trends in Technology and Future Opportunities

    Directory of Open Access Journals (Sweden)

    Eun-Kyoung Yim Breuer

    2011-01-01

    Full Text Available Technological and scientific innovations over the last decade have greatly contributed to improved diagnostics, predictive models, and prognosis among cancers affecting women. In fact, an explosion of information in these areas has almost assured future generations that outcomes in cancer will continue to improve. Herein we discuss the current status of breast, cervical, and ovarian cancers as it relates to screening, disease diagnosis, and treatment options. Among the differences in these cancers, it is striking that breast cancer has multiple predictive tests based upon tumor biomarkers and sophisticated, individualized options for prescription therapeutics while ovarian cancer lacks these tools. In addition, cervical cancer leads the way in innovative, cancer-preventative vaccines and multiple screening options to prevent disease progression. For each of these malignancies, emerging proteomic technologies based upon mass spectrometry, stable isotope labeling with amino acids, high-throughput ELISA, tissue or protein microarray techniques, and click chemistry in the pursuit of activity-based profiling can pioneer the next generation of discovery. We will discuss six of the latest techniques to understand proteomics in cancer and highlight research utilizing these techniques with the goal of improvement in the management of women's cancers.

  16. Femtosecond Optical Frequency Comb Technology Principle, Operation and Application

    CERN Document Server

    Ye, Jun

    2005-01-01

    Over the last few years, there has been a remarkable convergence among the fields of ultrafast optics, optical frequency metrology, and precision laser spectroscopy. This convergence has enabled unprecedented advances in control of the electric field of the pulses produced by femtosecond mode-locked lasers. The resulting spectrum consists of a comb of sharp spectral lines with well-defined frequencies. These new techniques and capabilities are generally known as "femtosecond comb technology." They have had dramatic impact on the diverse fields of precision measurement and extreme nonlinear optical physics. This book provides an introductory description of mode-locked lasers, the connection between time and frequency descriptions of their output and the physical origins of the electric field dynamics, together with an overview of applications of femtosecond comb technology. Individual chapters go into more detail on mode-locked laser development, spectral broadening in microstructure fiber, optical parametric ...

  17. Adaptive optics technology for high-resolution retinal imaging.

    Science.gov (United States)

    Lombardo, Marco; Serrao, Sebastiano; Devaney, Nicholas; Parravano, Mariacristina; Lombardo, Giuseppe

    2012-12-27

    Adaptive optics (AO) is a technology used to improve the performance of optical systems by reducing the effects of optical aberrations. The direct visualization of the photoreceptor cells, capillaries and nerve fiber bundles represents the major benefit of adding AO to retinal imaging. Adaptive optics is opening a new frontier for clinical research in ophthalmology, providing new information on the early pathological changes of the retinal microstructures in various retinal diseases. We have reviewed AO technology for retinal imaging, providing information on the core components of an AO retinal camera. The most commonly used wavefront sensing and correcting elements are discussed. Furthermore, we discuss current applications of AO imaging to a population of healthy adults and to the most frequent causes of blindness, including diabetic retinopathy, age-related macular degeneration and glaucoma. We conclude our work with a discussion on future clinical prospects for AO retinal imaging.

  18. Adaptive Optics Technology for High-Resolution Retinal Imaging

    Directory of Open Access Journals (Sweden)

    Giuseppe Lombardo

    2012-12-01

    Full Text Available Adaptive optics (AO is a technology used to improve the performance of optical systems by reducing the effects of optical aberrations. The direct visualization of the photoreceptor cells, capillaries and nerve fiber bundles represents the major benefit of adding AO to retinal imaging. Adaptive optics is opening a new frontier for clinical research in ophthalmology, providing new information on the early pathological changes of the retinal microstructures in various retinal diseases. We have reviewed AO technology for retinal imaging, providing information on the core components of an AO retinal camera. The most commonly used wavefront sensing and correcting elements are discussed. Furthermore, we discuss current applications of AO imaging to a population of healthy adults and to the most frequent causes of blindness, including diabetic retinopathy, age-related macular degeneration and glaucoma. We conclude our work with a discussion on future clinical prospects for AO retinal imaging.

  19. Proteomic expression of microfungal ripening starter Geotrichum candidum submitted to cold stress is strain-dependent: studies using 2d-dige technology and samespots software analysis.

    Science.gov (United States)

    Missous, Ghalia; Thammavongs, Bouachanh; Dieuleveux, Virginie; Houssin, Maryline; Henry, Joël; Panoff, Jean-Michel

    2012-01-01

    Geotrichum candidum is a micro-fungus widely used as a ripening starter in cheese making. In anthropogenic environments such as dairy industries, this microorganism is subjected to many environmental and technological stresses including low temperature exposure. Our aim was to study the proteomic response of G. candidum to cold stress using a comparative proteomic approach by two-dimensional Differential In Gel Electrophoresis (2D DIGE). This technique consists on the labeling of proteins by specific fluorescent dyes (CyDyes). The results, obtained with G. candidum cells subjected to cold temperature, show significant proteomic patterns differences compared with the standard conditions. Furthermore, this biochemical response seems strain specific. 2D DIGE technology combined with SameSpots™ software analysis support these results through an important statistical validity. The comparative studies in a single gel, using two different fluorescent CyDyes (Cy3 and Cy5), lead to proteins differentiation. Selected spots were treated and analyzed by mass spectrometry.

  20. A passive optical network based on optical code division multiplexing and time division multiple access technology

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    A passive optical network (PON) scheme based on optical code division multiplexing (OCDM) for the downstream traffics is proposed and analyzed in detail. In the PON, the downstream traffics are broadcasted by OCDM technology to guarantee the security, while the upstream traffics pass through the same optical fiber by the common time division multiple access (TDMA) technology to decrease the cost.This schemes are denoted as OCDM/TDMA-PON, which can be applied to an optical access network (OAN) with full services on demand, such as Internet protocol, video on demand, tele-presence and high quality audio. The proposed OCDM/TDMA-PON scheme combines advantages of PON, TDMA, and OCDM technology. Simulation results indicate that the designed scheme improves the OAN performance,and enhances flexibility and scalability of the system.

  1. Technological Aspects of Creating Large-size Optical Telescopes

    Directory of Open Access Journals (Sweden)

    V. V. Sychev

    2015-01-01

    Full Text Available A concept of the telescope creation, first of all, depends both on a choice of the optical scheme to form optical radiation and images with minimum losses of energy and information and on a choice of design to meet requirements for strength, stiffness, and stabilization characteristics in real telescope operation conditions. Thus, the concept of creating large-size telescopes, certainly, involves the use of adaptive optics methods and means.The level of technological capabilities to realize scientific and engineering ideas define a successful development of large-size optical telescopes in many respects. All developers pursue the same aim that is to raise an amount of information by increasing a main mirror diameter of the telescope.The article analyses the adaptive telescope designs developed in our country. Using a domestic ACT-25 telescope as an example, it considers creation of large-size optical telescopes in terms of technological aspects. It also describes the telescope creation concept features, which allow reaching marginally possible characteristics to ensure maximum amount of information.The article compares a wide range of large-size telescopes projects. It shows that a domestic project to create the adaptive ACT-25 super-telescope surpasses its foreign counterparts, and there is no sense to implement Euro50 (50m and OWL (100m projects.The considered material gives clear understanding on a role of technological aspects in development of such complicated optic-electronic complexes as a large-size optical telescope. The technological criteria of an assessment offered in the article, namely specific informational content of the telescope, its specific mass, and specific cost allow us to reveal weaknesses in the project development and define a reserve regarding further improvement of the telescope.The analysis of results and their judgment have shown that improvement of optical largesize telescopes in terms of their maximum

  2. Optical technologies and the publishing revolution

    Science.gov (United States)

    Thorman, Chris

    1990-08-01

    Several factors work together to make the publishing industry among the most demanding environments for extremely high performance mass storage systems. The first factor is the size and volume of the images, text sources, and other data that must be gathered, considered, selected and altered as a publication is produced. Mother factor is the speed with which these operations must be performed in order to support a publishing staff in its fast paced and time critical work. A third factor is the intensive level of interpersonal collaboration that is a fundamental part of the publication process. The requirements of the publishing industry are only beginning to be addressed by currently available technologies. Examples of some typical publishing processes are presented with an analysis of the storage and computational capabilities that would be required to support them at their current level of flexibility. An examination of existing storage and network technologies points out that there is much need for improvement in the areas of shared storage and retrieval systems for publishing. Data rates of existing systems remain inadequate for the needs of image intensive publication work.

  3. Easing wave optics understanding through technology

    Science.gov (United States)

    Garg, Amit; Kachru, Priyanka; Singh, Shatakshi; Tiwary, Rishabh

    2014-09-01

    As part of the course curriculum of Physics of class XII, students do a comprehensive theoretical study about the wave nature of light specially related to interference, diffraction and polarisation. But, these studies are not backed up by any experiments. This makes the understanding of these complex topics very difficult. The purpose of the present outreach activity is to make students do many hands-on experiments on the above topics. The experiments have been designed keeping in mind the various theoretical concepts taught to the students. The studies are helpful in making the students understand fringe formation, intensity variation across the fringes formed helping them compare interference and diffraction fringes, dependence of fringe separation on various parameters, linear polarization, Malus' law and Brewster's law. The tools used to perform the experiments include He-Ne/ diode laser(s), Laptop/Digital Storage Oscilloscope, CCD, various optical components like set of polarisers and analysers, glass plate and hardware components like single slit and double slit. The class XII students are divided into batches and each batch is handled by a team of three University of Delhi at ANDC SPIE student chapter members. The gains of the activity are measured through pre and post-tests.

  4. Elastic optical networks architectures, technologies, and control

    CERN Document Server

    Velasco, Luis

    2016-01-01

    This book addresses challenges and potential solutions surrounding the dramatic yearly increases in bandwidth demand. The editors discuss the predicament surrounding current growth, which is predicted to continue because of the proliferation of disruptive, high bandwidth applications like video and cloud applications. They also discuss that in addition to growth, traffic will become much more dynamic, both in time and direction. The contributors show how large changes in traffic magnitude during a 24-hour period can be observed, as day-time business users have very different demands to evening-time residential customers, and how this plays into addressing future challenges. In addition, they discuss potential solutions for the issues surrounding situations where multiple content and cloud service providers offer competing services, causing the traffic direction to become more dynamic. The contributors discuss that although the WDM transponder technology can be upgraded to 100Gb/s in the short to medium term, ...

  5. All-Optical Switches in Optical Time-Division Multiplexing Technology: Theory,Experience and Application

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    Optical time division multiplexing (OTDM) is one of thepromisinig ways for the future high-speed optical fiber communication networks. All-optical switch is, being one of the core technologies of OTDM systems and networks, crucial to realize the various signal processes including time-division demultiplexing, packet switching, all-optical regenerating and so on. This thesis mainly studies various all-optical switch technologies and their utilization in the fields of all-optical signal processings in the OTDM systems and networks. The main jobs are listed as follows.(1) A novel all-optical ultrafast demultiplexing scheme using the soliton self-trapping effect in birefringent fiber is proposed.(2) The demultiplexing performance of the Nonlinear Optical Loop Mirror(NOLM) is thoroughly analyzed and its optimization is further discussed.(3) The performance analysis and the configuration optimization of the all-optical switches based on the Semiconductor Optical Amplifier(SOA) are systematically presented. The speed limitation of the all-optical SOA switches induced by the fast gain depletion of SOA is discussed. Besides, a novel SOA switch is proposed, which adopts the asymmetric Mach-Zehnder Interferometer configuration.(4) The 8×2\\^5 Gb/s OTDM experimental transmission system along 105 km standard fiber is realized using the NOLM demultiplexer.(5) The NOLM switch is used to realize the all-optical 3R regeneration of 2\\^5 Gb/s Return-to-Zero signal.(6) The feasibility and limitation of the all-optical SOA packet switch is discussed. And a developed MZI configuration of SOA packet switch is further shown to improve the packet switching performance. Finally, an all-optical packet dropping node suitable in the networks with ring or bus configuration and an all-optical packet switching node in the ShuffleNet networks are proposed to show the feasibility of all-optical packet switching through combining the all-optical switches and the reasonable logic decisions.

  6. Identification of Potential Mediators of Retinotopic Mapping: A Comparative Proteomic Analysis of Optic Nerve from WT and Phr1 Retinal Knockout Mice

    Science.gov (United States)

    Lee, Andrew R.; Lamb, Rachel R.; Chang, Julietta H.; Erdmann-Gilmore, Petra; Lichti, Cheryl F.; Rohrs, Henry W.; Malone, James P.; Wairkar, Yogesh P.; DiAntonio, Aaron; Townsend, R. Reid; Culican, Susan M.

    2012-01-01

    Retinal ganglion cells (RGCs) transmit visual information topographically from the eye to the brain, creating a map of visual space in retino-recipient nuclei (retinotopy). This process is affected by retinal activity and by activity-independent molecular cues. Phr1, which encodes a presumed E3 ubiquitin ligase (PHR1), is required presynaptically for proper placement of RGC axons in the lateral geniculate nucleus and the superior colliculus, suggesting that increased levels of PHR1 target proteins may be instructive for retinotopic mapping of retinofugal projections. To identify potential target proteins, we conducted a proteomic analysis of optic nerve to identify differentially abundant proteins in the presence or absence of Phr1 in RGCs. 1D gel electrophoresis identified a specific band in controls that was absent in mutants. Targeted proteomic analysis of this band demonstrated the presence of PHR1. Additionally, we conducted an unbiased proteomic analysis that identified 30 proteins as being significantly different between the two genotypes. One of these, heterogeneous nuclear ribonucleoprotein M (hnRNP-M), regulates antero-posterior patterning in invertebrates and can function as a cell surface adhesion receptor in vertebrates. Thus we have demonstrated that network analysis of quantitative proteomic data is a useful approach for hypothesis generation and for identifying biologically relevant targets in genetically altered biological models. PMID:22985349

  7. Optical Coherence Tomography: An Emerging Technology for Biomedical Imaging and Optical Biopsy

    OpenAIRE

    Fujimoto, James G.; Pitris, Costas; Boppart, Stephen A.; Brezinski, Mark E.

    2000-01-01

    Optical coherence tomography (OCT) is an emerging technology for performing high-resolution cross-sectional imaging. OCT is analogous to ultrasound imaging, except that it uses light instead of sound. OCT can provide cross-sectional images of tissue structure on the micron scale in situ and in real time. Using OCT in combination with catheters and endoscopes enables high-resolution intraluminal imaging of organ systems. OCT can function as a type of optical biopsy and is a powerful imaging te...

  8. Advancement of Miniature Optic Gas Sensor (MOGS) Probe Technology

    Science.gov (United States)

    Chullen, Cinda

    2015-01-01

    Advancement of Miniature Optic Gas Sensor (MOGS) Probe Technology" project will investigate newly developed optic gas sensors delivered from a Small Business Innovative Research (SBIR) Phase II effort. A ventilation test rig will be designed and fabricated to test the sensors while integrated with a Suited Manikin Test Apparatus (SMTA). Once the sensors are integrated, a series of test points will be completed to verify that the sensors can withstand Advanced Suit Portable Life Support System (PLSS) environments and associated human metabolic profiles for changes in pressure and levels of Oxygen (ppO2), carbon dioxide (ppCO2), and humidity (ppH2O).

  9. Identification of membrane-associated proteins from Campylobacter jejuni strains using complementary proteomics technologies.

    Science.gov (United States)

    Cordwell, Stuart J; Len, Alice C L; Touma, Rachel G; Scott, Nichollas E; Falconer, Linda; Jones, David; Connolly, Angela; Crossett, Ben; Djordjevic, Steven P

    2008-01-01

    Campylobacter jejuni is the leading cause of food- and water-borne illness world-wide. The membrane-associated proteome of a recent C. jejuni gastrointestinal isolate (JHH1) was generated by sodium carbonate precipitation and ultracentrifugation followed by 2-DE and MALDI-TOF MS as well as 2-DLC (strong cation exchange followed by RP chromatography) of trypsin digests coupled to MS/MS (2-DLC/MS/MS). 2-DE/MS identified 77 proteins, 44 of which were predicted membrane proteins, while 2-DLC/MS/MS identified 432 proteins, of which 206 were predicted to be membrane associated. A total of 453 unique proteins (27.4% of the C. jejuni theoretical proteome), including 187 bona fide membrane proteins were identified in this study. Membrane proteins were also compared between C. jejuni JHH1 and ATCC 700297 to identify factors potentially associated with increased gastrointestinal virulence. We identified 28 proteins that were significantly (>two-fold) more abundant in, or unique to, JHH1, including eight proteins involved in chemotaxis signal transduction and flagellar motility, the amino acid-binding surface antigens CjaA and CjaC, and four outer membrane proteins (OMPs) of unknown function (Cj0129c, Cj1031, Cj1279c, and Cj1721c). Immunoblotting using convalescent patient sera generated post-gastrointestinal infection revealed 13 (JHH1) and 12 (ATCC 700297) immunoreactive proteins. These included flagellin (FlaA) and CadF as well as Omp18, Omp50, Cj1721c, PEB1A, PEB2, and PEB4A. This study provides a comprehensive analysis of membrane-associated proteins from C. jejuni.

  10. Ultrafast optical imaging technology: principles and applications of emerging methods

    Science.gov (United States)

    Mikami, Hideharu; Gao, Liang; Goda, Keisuke

    2016-09-01

    High-speed optical imaging is an indispensable technology for blur-free observation of fast transient dynamics in virtually all areas including science, industry, defense, energy, and medicine. High temporal resolution is particularly important for microscopy as even a slow event appears to occur "fast" in a small field of view. Unfortunately, the shutter speed and frame rate of conventional cameras based on electronic image sensors are significantly constrained by their electrical operation and limited storage. Over the recent years, several unique and unconventional approaches to high-speed optical imaging have been reported to circumvent these technical challenges and achieve a frame rate and shutter speed far beyond what can be reached with the conventional image sensors. In this article, we review the concepts and principles of such ultrafast optical imaging methods, compare their advantages and disadvantages, and discuss an entirely new class of applications that are possible using them.

  11. 2nd Topical Workshop on Laser Technology and Optics Design

    CERN Document Server

    2013-01-01

    Lasers have a variety of applications in particle accelerator operation and will play a key role in the development of future particle accelerators by improving the generation of high brightness electron and exotic ion beams and through increasing the acceleration gradient. Lasers will also make an increasingly important contribution to the characterization of many complex particle beams by means of laser-based beam diagnostics methods. The second LANET topical workshop will address the key aspects of laser technology and optics design relevant to laser application to accelerators. The workshop will cover general optics design, provide an overview of different laser sources and discuss methods to characterize beams in details. Participants will be able to choose from a range of topical areas that go deeper in more specific aspects including tuneable lasers, design of transfer lines, noise sources and their elimination and non-linear optics effects. The format of the workshop will be mainly training-based wit...

  12. DESIGNING FEATURES OF POWER OPTICAL UNITS FOR TECHNOLOGICAL EQUIPMENT

    Directory of Open Access Journals (Sweden)

    M. Y. Afanasiev

    2016-03-01

    Full Text Available This paper considers the question of an optical unit designing for transmitting power laser radiation through an optical fiber. The aim of this work is designing a simple construction unit with minimized reflection losses. The source of radiation in the optical unit described below is an ultraviolet laser with diode pumping. We present the general functioning scheme and designing features for the three main parts: laser beam deflecting system, laser beam dump and optical unit control system. The described laser beam deflection system is composed of a moving flat mirror and a spherical scattering mirror. Comparative analysis of the production technology for such mirrors was carried out, and, as a result, the decision was made to produce both mirrors of 99.99 % pure molybdenum without coating. A moving mirror deflects laser emission from a source through a fiber or deflects it on a spherical mirror and into the laser beam dump, moreover, switching from one position to another occurs almost immediately. It is shown that a scattering mirror is necessary, otherwise, the absorbing surface of the beam dump is being worn out irregularly. The laser beam dump is an open conical cavity, in which the conical element with its spire turned to the emission source is placed. Special microgeometry of the internal surface of the beam dump is suggested for the better absorption effect. An optical unit control system consists of a laser beam deflection system, laser temperature sensor, deflection system solenoid temperature sensor, and deflection mirror position sensor. The signal processing algorithm for signals coming from the sensors to the controller is described. The optical unit will be used in special technological equipment.

  13. Ultra-high-speed serial optical communications: Enabling technologies

    DEFF Research Database (Denmark)

    Oxenløwe, Leif Katsuo; Galili, Michael; Mulvad, Hans Christian Hansen

    2008-01-01

    This paper will present recently identified and demonstrated key technologies for ultra-high-speed serial communications. Certain key components such as stabilised highly non-linear fibre switches, periodically poled Lithium Niobate devices and semiconductor optical amplifiers will be described...... with demonstrations of 640 Gb/s transmission, clock recovery, demultiplexing, add/drop, wavelength conversion and channel identification. Timing jitter tolerance is addressed through techniques to create flat-top pulses....

  14. 3rd International Conference on Photonics, Optics and Laser Technology

    CERN Document Server

    Raposo, Maria

    2016-01-01

    The book provides a collection of selected papers presented to the third International Conference on Photonics, Optics and Laser Technology PHOTOPTICS 2015, covering the three main conference scientific areas of “Optics”, “Photonics” and “Lasers”. The selected papers, in two classes full and short, result from a double blind review carried out by the conference program committee members which are highly qualified experts in conference topic areas.

  15. 2nd International Conference on Photonics, Optics and Laser Technology

    CERN Document Server

    Raposo, Maria

    2016-01-01

    This collection of the selected papers presented to the Second International Conference on Photonics, Optics and laser technology PHOTOPTICS 2014 covers the three main conference scientific areas of “Optics”, “Photonics” and “Lasers”. The selected papers, in two classes full and short, result from a double blind review carried out by conference Program Committee members who are highly qualified experts in the conference topic areas.

  16. Optical Coherence Tomography: An Emerging Technology for Biomedical Imaging and Optical Biopsy1

    Science.gov (United States)

    Fujimoto, James G; Pitris, Costas; Boppart, Stephen A; Brezinski, Mark E

    2000-01-01

    Abstract Optical coherence tomography (OCT) is an emerging technology for performing high-resolution cross-sectional imaging. OCT is analogous to ultrasound imaging, except that it uses light instead of sound. OCT can provide cross-sectional images of tissue structure on the micron scale in situ and in real time. Using OCT in combination with catheters and endoscopes enables high-resolution intraluminal imaging of organ systems. OCT can function as a type of optical biopsy and is a powerful imaging technology for medical diagnostics because unlike conventional histopathology which requires removal of a tissue specimen and processing for microscopic examination, OCT can provide images of tissue in situ and in real time. OCT can be used where standard excisional biopsy is hazardous or impossible, to reduce sampling errors associated with excisional biopsy, and to guide interventional procedures. In this paper, we review OCT technology and describe its potential biomedical and clinical applications. PMID:10933065

  17. Coherent DWDM technology for high speed optical communications

    Science.gov (United States)

    Saunders, Ross

    2011-10-01

    The introduction of coherent digital optical transmission enables a new generation of high speed optical data transport and fiber impairment mitigation. An initial implementation of 40 Gb/s coherent systems using Dual Polarization Quadrature Phase Shift Keying (DP-QPSK) is already being installed in carrier networks. New systems running at 100 Gb/s DP-QPSK data rate are in development and early technology lab and field trial phase. Significant investment in the 100 Gb/s ecosystem (optical components, ASICs, transponders and systems) bodes well for commercial application in 2012 and beyond. Following in the footsteps of other telecommunications fields such as wireless and DSL, we can expect coherent optical transmission to evolve from QPSK to higher order modulations schemes such as Mary PSK and/or QAM. This will be an interesting area of research in coming years and poses significant challenges in terms of electro-optic, DSP, ADC/DAC design and fiber nonlinearity mitigation to reach practical implementation ready for real network deployments.

  18. Overview of deformable mirror technologies for adaptive optics and astronomy

    Science.gov (United States)

    Madec, P.-Y.

    2012-07-01

    From the ardent bucklers used during the Syracuse battle to set fire to Romans’ ships to more contemporary piezoelectric deformable mirrors widely used in astronomy, from very large voice coil deformable mirrors considered in future Extremely Large Telescopes to very small and compact ones embedded in Multi Object Adaptive Optics systems, this paper aims at giving an overview of Deformable Mirror technology for Adaptive Optics and Astronomy. First the main drivers for the design of Deformable Mirrors are recalled, not only related to atmospheric aberration compensation but also to environmental conditions or mechanical constraints. Then the different technologies available today for the manufacturing of Deformable Mirrors will be described, pros and cons analyzed. A review of the Companies and Institutes with capabilities in delivering Deformable Mirrors to astronomers will be presented, as well as lessons learned from the past 25 years of technological development and operation on sky. In conclusion, perspective will be tentatively drawn for what regards the future of Deformable Mirror technology for Astronomy.

  19. Optimization of platelet concentrate quality: application of proteomic technologies to donor management.

    Science.gov (United States)

    Schubert, Peter; Culibrk, Brankica; Karwal, Simrath; Slichter, Sherrill J; Devine, Dana V

    2012-12-01

    Quality management of blood products is essential for blood banking. It is influenced by both processing and donor characteristics and assured by monitoring routine in vitro parameters to defined product specifications. However, these measures correlate poorly with the in vivo behavior of transfused platelets and cannot be used to select optimal donors. Since radiolabeled platelet recovery and survival studies are expensive and time consuming, there is an ongoing search for simpler measures that predict platelet transfusion outcomes. We performed a pilot study using semi-qualitative proteomics to assess changes in the platelet protein profile of donors with either acceptable or unacceptable in vivo radiolabeled autologous platelet recovery and survival measurements. Proteins changing during a 9-day storage period included cytoskeletal elements talin, vinculin and moesin as well as signal transduction proteins 14-3-3, RhoGDI and Rap1. Two of nine donations exhibited a decrease in these proteins and poor in vivo platelet recovery and survival whereas the remaining donors showed acceptable platelet recovery and survival and expected protein profiles. Analyses revealed a significant correlation between protein levels of Rap1 and RhoGDI during storage and platelet recovery and survival. This study provides for the first time preliminary data showing evidence of the utility of protein profiling to predict platelet transfusion quality. This article is part of a Special Issue entitled: Integrated omics.

  20. PROTEOMICS in aquaculture

    DEFF Research Database (Denmark)

    Rodrigues, Pedro M.; Silva, Tomé S.; Dias, Jorge

    2012-01-01

    growth in production is still expected for decades to come. Aquaculture is, though, a very competitive market, and a global awareness regarding the use of scientific knowledge and emerging technologies to obtain a better farmed organism through a sustainable production has enhanced the importance...... nutritional, health or quality properties for functional foods and the integration of proteomics techniques in addressing this challenging issue. This article is part of a Special Issue entitled: Farm animal proteomics....

  1. OPTICAL FIBER SENSOR TECHNOLOGIES FOR EFFICIENT AND ECONOMICAL OIL RECOVERY

    Energy Technology Data Exchange (ETDEWEB)

    Anbo Wang; Kristie L. Cooper; Gary R. Pickrell

    2003-06-01

    Efficient recovery of petroleum reserves from existing oil wells has been proven to be difficult due to the lack of robust instrumentation that can accurately and reliably monitor processes in the downhole environment. Commercially available sensors for measurement of pressure, temperature, and fluid flow exhibit shortened lifetimes in the harsh downhole conditions, which are characterized by high pressures (up to 20 kpsi), temperatures up to 250 C, and exposure to chemically reactive fluids. Development of robust sensors that deliver continuous, real-time data on reservoir performance and petroleum flow pathways will facilitate application of advanced recovery technologies, including horizontal and multilateral wells. This is the final report for the four-year program ''Optical Fiber Sensor Technologies for Efficient and Economical Oil Recovery'', funded by the National Petroleum Technology Office of the U.S. Department of Energy, and performed by the Center for Photonics Technology of the Bradley Department of Electrical and Computer Engineering at Virginia Tech from October 1, 1999 to March 31, 2003. The main objective of this research program was to develop cost-effective, reliable optical fiber sensor instrumentation for real-time monitoring of various key parameters crucial to efficient and economical oil production. During the program, optical fiber sensors were demonstrated for the measurement of temperature, pressure, flow, and acoustic waves, including three successful field tests in the Chevron/Texaco oil fields in Coalinga, California, and at the world-class oil flow simulation facilities in Tulsa, Oklahoma. Research efforts included the design and fabrication of sensor probes, development of signal processing algorithms, construction of test systems, development and testing of strategies for the protection of optical fibers and sensors in the downhole environment, development of remote monitoring capabilities allowing real

  2. Signature Optical Cues: Emerging Technologies for Monitoring Plant Health

    Directory of Open Access Journals (Sweden)

    Anand K. Asundi

    2008-05-01

    Full Text Available Optical technologies can be developed as practical tools for monitoring plant health by providing unique spectral signatures that can be related to specific plant stresses. Signatures from thermal and fluorescence imaging have been used successfully to track pathogen invasion before visual symptoms are observed. Another approach for noninvasive plant health monitoring involves elucidating the manner with which light interacts with the plant leaf and being able to identify changes in spectral characteristics in response to specific stresses. To achieve this, an important step is to understand the biochemical and anatomical features governing leaf reflectance, transmission and absorption. Many studies have opened up possibilities that subtle changes in leaf reflectance spectra can be analyzed in a plethora of ways for discriminating nutrient and water stress, but with limited success. There has also been interest in developing transgenic phytosensors to elucidate plant status in relation to environmental conditions. This approach involves unambiguous signal creation whereby genetic modification to generate reporter plants has resulted in distinct optical signals emitted in response to specific stressors. Most of these studies are limited to laboratory or controlled greenhouse environments at leaf level. The practical translation of spectral cues for application under field conditions at canopy and regional levels by remote aerial sensing remains a challenge. The movement towards technology development is well exemplified by the Controlled Ecological Life Support System under development by NASA which brings together technologies for monitoring plant status concomitantly with instrumentation for environmental monitoring and feedback control.

  3. Technology Development for Nickel X-Ray Optics Enhancement

    Science.gov (United States)

    Bubarev, Mikhail; Ramsey, Brian; Engelhaupt, Darell

    2008-01-01

    We are developing grazing-incidence x-ray optics for high-energy astrophysics using the electroform-nickel replication process. In this process, mirror shells are fabricated by replication off super-polished cylindrical mandrels. The mirrors fabricated using this process have a demonstrated optical performance at the level of 11-12 arc seconds resolution (HPD) for 30 keV x rays. Future missions demand ever higher angular resolutions and this places stringent requirements on the quality of the mandrels, the precision of the metrology, and the mounting and alignment of the mirror shells in their housings. A progress report on recent technology developments in all these areas will be presented along with a discussion on possible post fabrication, in-situ improvement of the x-ray mirrors quality.

  4. Optimizing Fiber Topologies for WDM Optical Networks Based on Multi-Granularity Optical Switching Technology

    Institute of Scientific and Technical Information of China (English)

    LI Junjie; ZHOU Bingkun; ZHANG Hanyi; LI Yanhe

    2006-01-01

    For the quality of service (QoS) and fairness considerations, the hop counts of various lightpaths in a wavelength division multiplexing (WDM) optical network should be short and compact. The development of multi-granularity optical switching technology has made it possible to construct various fiber topologies over a fixed physical topology. This paper describes a fiber topology design (FTD) problem, which minimizes the maximum number of required fibers in the physical links for a maximum lightpath hop count in the fiber topology. After the formular description for the FTD problem, a method was given to obtain the lower bound on the maximum number of required fibers. For large or moderate scale networks, three heuristic algorithms are given to efficiently solve the FTD problem. This study gives a new way to optimize the resource configuration performance in WDM optical networks at the topology level and proves its effectiveness via both analyses and numerical experiments.

  5. OPTICAL FIBER SENSOR TECHNOLOGIES FOR EFFICIENT AND ECONOMICAL OIL RECOVERY

    Energy Technology Data Exchange (ETDEWEB)

    Kristie Cooper; Gary Pickrell; Anbo Wang

    2003-04-01

    This report summarizes technical progress over the fourth year of the ''Optical Fiber Sensor Technologies for Efficient and Economical Oil Recovery'' program, funded by the Federal Energy Technology Center of the U.S. Department of Energy, and performed by the Center for Photonics Technology of the Bradley Department of Electrical and Computer Engineering at Virginia Tech. During the reporting period, research efforts under the program were focused on the development and evaluation of the fiber optic flow sensor system, and field testing in Tulsa, OK and the second field test of the pressure and temperature sensors in Coalinga, CA. The feasibility of a self-compensating fiber optic flow sensor based on a cantilever beam and interferometer for real-time flow rate measurements in the fluid filled pipes of oil field was clearly demonstrated. In addition, field testing of the pressure and temperature sensors deployed downhole continued. These accomplishments are summarized here: (1) Theoretical analysis and simulations were performed to ensure performance of the design. (2) The sensor fabrication and packaging techniques were investigated and improved. (3) Prototype flow sensors were fabricated based on the fabrication experience of hundreds of test sensors. (4) A lab-scale flow testing system was constructed and used for sensor evaluation. (5) Field-testing was performed in both the indoor and outdoor flow testing facility at the University of Tulsa, OK. (6) Testing of a multimode white light pressure and temperature sensor system continued at the oil site of Chevron/Texaco Company (Coalinga CA).

  6. Health information management using optical storage technology: case studies.

    Science.gov (United States)

    Kohn, D

    1992-05-01

    All the health care facilities examined in the case studies addressed several important organizational issues before and during the installation of their systems. All the facilities examined employee commitment. The prudent managers considered how easily their employees adapt to changes in their jobs and work environment. They considered how enthusiastic cooperation can be fostered in the creation of a liberated and reengineered office. This was determined not only by each individual's reaction to change, but also by the health care facility's track record with other system installations. For example, document image, diagnostic image, and coded data processing systems allow the integration of divergent health care information systems within complex institutions. Unfortunately, many institutions are currently struggling with how to create an information management architecture that will integrate their mature systems, such as their patient care and financial systems. Information managers must realize that if optical storage technology-based systems are used in a strategic and planned fashion, these systems can act as focal points for systems integration, not as promises to further confuse the issue. Another issue that needed attention in all the examples was the work environment. The managers considered how the work environment was going to affect the ability to integrate optical image and data systems into the institution. For example, many of these medical centers have created alliances with clinics, HMOs, and large corporate users of medical services. This created a demand for all or part of the health information outside the confines of the original institution. Since the work environment is composed of a handful of factors such as merged medical services, as many work environment factors as possible were addressed before application of the optical storage technology solution in the institutions. And finally, the third critical issue was the organization of work

  7. EDITORIAL: Special issue on optical neural engineering: advances in optical stimulation technology Special issue on optical neural engineering: advances in optical stimulation technology

    Science.gov (United States)

    Shoham, Shy; Deisseroth, Karl

    2010-08-01

    Neural engineering, itself an 'emerging interdisciplinary research area' [1] has undergone a sea change over the past few years with the emergence of exciting new optical technologies for monitoring, stimulating, inhibiting and, more generally, modulating neural activity. To a large extent, this change is driven by the realization of the promise and complementary strengths that emerging photo-stimulation tools offer to add to the neural engineer's toolbox, which has been almost exclusively based on electrical stimulation technologies. Notably, photo-stimulation is non-contact, can in some cases be genetically targeted to specific cell populations, can achieve high spatial specificity (cellular or even sub-cellular) in two or three dimensions, and opens up the possibility of large-scale spatial-temporal patterned stimulation. It also offers a seamless solution to the problem of cross-talk generated by simultaneous electrical stimulation and recording. As in other biomedical optics phenomena [2], photo-stimulation includes multiple possible modes of interaction between light and the target neurons, including a variety of photo-physical and photo-bio-chemical effects with various intrinsic components or exogenous 'sensitizers' which can be loaded into the tissue or genetically expressed. Early isolated reports of neural excitation with light date back to the late 19th century [3] and to Arvanitaki and Chalazonitis' work five decades ago [4]; however, the mechanism by which these and other direct photo-stimulation, inhibition and modulation events [5-7] took place is yet unclear, as is their short- and long-term safety profile. Photo-chemical photolysis of covalently 'caged' neurotransmitters [8, 9] has been widely used in cellular neuroscience research for three decades, including for exciting or inhibiting neural activity, and for mapping neural circuits. Technological developments now allow neurotransmitters to be uncaged with exquisite spatial specificity (down to

  8. Establishing research strategies, methodologies and technologies to link genomics and proteomics to seagrass productivity, community metabolism, and ecosystem carbon fluxes.

    Science.gov (United States)

    Mazzuca, Silvia; Björk, M; Beer, S; Felisberto, P; Gobert, S; Procaccini, G; Runcie, J; Silva, J; Borges, A V; Brunet, C; Buapet, P; Champenois, W; Costa, M M; D'Esposito, D; Gullström, M; Lejeune, P; Lepoint, G; Olivé, I; Rasmusson, L M; Richir, J; Ruocco, M; Serra, I A; Spadafora, A; Santos, Rui

    2013-01-01

    A complete understanding of the mechanistic basis of marine ecosystem functioning is only possible through integrative and interdisciplinary research. This enables the prediction of change and possibly the mitigation of the consequences of anthropogenic impacts. One major aim of the European Cooperation in Science and Technology (COST) Action ES0609 "Seagrasses productivity. From genes to ecosystem management," is the calibration and synthesis of various methods and the development of innovative techniques and protocols for studying seagrass ecosystems. During 10 days, 20 researchers representing a range of disciplines (molecular biology, physiology, botany, ecology, oceanography, and underwater acoustics) gathered at The Station de Recherches Sous-marines et Océanographiques (STARESO, Corsica) to study together the nearby Posidonia oceanica meadow. STARESO is located in an oligotrophic area classified as "pristine site" where environmental disturbances caused by anthropogenic pressure are exceptionally low. The healthy P. oceanica meadow, which grows in front of the research station, colonizes the sea bottom from the surface to 37 m depth. During the study, genomic and proteomic approaches were integrated with ecophysiological and physical approaches with the aim of understanding changes in seagrass productivity and metabolism at different depths and along daily cycles. In this paper we report details on the approaches utilized and we forecast the potential of the data that will come from this synergistic approach not only for P. oceanica but for seagrasses in general.

  9. Thin film technologies for optoelectronic components in fiber optic communication

    Science.gov (United States)

    Perinati, Agostino

    1998-02-01

    'The Asian Routes Towards the Global Information Society' and 'Towards a Strategic Planning for the Global Information Society' will be the forum themes of 'Asia Telecom 97' and 'Telecom Interactice 97' events respectively, to be held by the International Telecommunication Union (ITU) in order to further telecommunication development around the world. International telecommunications network affects our life by keeping us in touch, bringing us world news and underpinning the global economy. Global tele-economy, global information infrastructure, global information society terms are more and more used to indicate the evolution towards an information- driven world where the access to information, communication and technologies is essential to the economic and social development in every country. Telecommunication industry can strongly contribute to this evolution together with broadcasting and computer industry, and fiber optic communications are expected to continue to grow up and share a relevant part of the total telecom market. In 1995 telecom market shown a 3.8 percent worldwide investment growth reaching a 545 billion value. According to 'Kessler Marketing Intelligence (KMI) Corp.' analysis of fiberoptics and multimedia market the amount of cabled fiber installed in U.S. will be around 11 million fiber-km in 1997 and 15 million fiber-km are predicted in the year 2000. Between 1995 and 1998 the undersea industry is estimated to deal with 13.9 billion as additional undersea cable systems investment in the global telecom network. In China beside satellite telecom stations and digital microwave systems 22 fiber optic backbones have been realized and another 23 systems are expected to be built in the Ninth Five-Year National Plan (1996 to approximately 2000) with a total length of nearly 30,000 sheat-km. The study, Fiber and Fiberoptic Cable Markets in China, recently released by KMI Corp. shows that fiber optic cable installation by MPT and other network operators

  10. Optical Characterization of Different Thin Film Module Technologies

    Directory of Open Access Journals (Sweden)

    R. Ebner

    2015-01-01

    Full Text Available For a complete quality control of different thin film module technologies (a-Si, CdTe, and CIS a combination of fast and nondestructive methods was investigated. Camera-based measurements, such as electroluminescence (EL, photoluminescence (PL, and infrared (IR technologies, offer excellent possibilities for determining production failures or defects in solar modules which cannot be detected by means of standard power measurements. These types of optical measurement provide high resolution images with a two-dimensional distribution of the characteristic features of PV modules. This paper focuses on quality control and characterization using EL, PL, and IR imaging with conventional cameras and an alternative excitation source for the PL-setup.

  11. 78 FR 17187 - Notice of Intent To Grant Exclusive Patent License; Fiber Optic Sensor Systems Technology...

    Science.gov (United States)

    2013-03-20

    ... Department of the Navy Notice of Intent To Grant Exclusive Patent License; Fiber Optic Sensor Systems... to grant to Fiber Optic Sensor Systems Technology Corporation, a revocable, nonassignable, exclusive... its intent to grant to Fiber Optic Sensor Systems Technology Corporation a revocable, nonassignable...

  12. Activities report of the Division of Optical Technology (FOA 33)

    Science.gov (United States)

    Letalick, Dietmar

    1988-11-01

    Research on hydro-optics; laser remote sensing; coherent CO2 laser radar; optical signatures; atmospheric transmission; ionizing radiation effects on electronics; fiber optics; optical processing; and terrain models is summarized.

  13. Adaptive optics scanning laser ophthalmoscope imaging: technology update

    Directory of Open Access Journals (Sweden)

    Merino D

    2016-04-01

    Full Text Available David Merino, Pablo Loza-Alvarez The Institute of Photonic Sciences (ICFO, The Barcelona Institute of Science and Technology, Castelldefels, Barcelona, Spain Abstract: Adaptive optics (AO retinal imaging has become very popular in the past few years, especially within the ophthalmic research community. Several different retinal techniques, such as fundus imaging cameras or optical coherence tomography systems, have been coupled with AO in order to produce impressive images showing individual cell mosaics over different layers of the in vivo human retina. The combination of AO with scanning laser ophthalmoscopy has been extensively used to generate impressive images of the human retina with unprecedented resolution, showing individual photoreceptor cells, retinal pigment epithelium cells, as well as microscopic capillary vessels, or the nerve fiber layer. Over the past few years, the technique has evolved to develop several different applications not only in the clinic but also in different animal models, thanks to technological developments in the field. These developments have specific applications to different fields of investigation, which are not limited to the study of retinal diseases but also to the understanding of the retinal function and vision science. This review is an attempt to summarize these developments in an understandable and brief manner in order to guide the reader into the possibilities that AO scanning laser ophthalmoscopy offers, as well as its limitations, which should be taken into account when planning on using it. Keywords: high-resolution, in vivo retinal imaging, AOSLO

  14. Review on an Advanced High-Temperature Measurement Technology: The Optical Fiber Thermometry

    Directory of Open Access Journals (Sweden)

    Y. B. Yu

    2009-01-01

    Full Text Available Optical fiber thermometry technology for high-temperature measurement is briefly reviewed in this paper. The principles, characteristics, recent progresses and advantages of the technology are described. Examples of using the technology are introduced. Many blackbody, infrared, and fluorescence optical thermometers are developed for practical applications.

  15. Precision Membrane Optical Shell (PMOS) Technology for Lightweight LIDAR Apertures Project

    Data.gov (United States)

    National Aeronautics and Space Administration — Precision membrane optical shell (PMOS) technology is an innovative combination of 1) ultra lightweight optically smooth membrane thin films, 2) advanced mold based...

  16. Precision Membrane Optical Shell (PMOS) Technology for RF/Microwave to Lightweight LIDAR Apertures Project

    Data.gov (United States)

    National Aeronautics and Space Administration — Membrane Optical Shell Technology (MOST) is an innovative combination of 1) very low areal density (40 to 200g/m2) optically smooth (<20 nm rms), metallic coated...

  17. Silica optical fiber technology for devices and components design, fabrication, and international standards

    CERN Document Server

    Oh, Kyunghwan

    2012-01-01

    From basic physics to new products, Silica Optical Fiber Technology for Device and Components examines all aspects of specialty optical fibers. Moreover, the inclusion of the latest international standards governing optical fibers enables you to move from research to fabrication to commercialization. Reviews all the latest specialty optical fiber technologies, including those developed for high capacity WDM applications; broadband fiber amplifiers; fiber filleters based on periodic coupling; fiber branching devices; and fiber terminations Discusses key differences among sing

  18. Are Optical Gas Imaging Technologies Effective For Methane Leak Detection?

    Science.gov (United States)

    Ravikumar, Arvind P; Wang, Jingfan; Brandt, Adam R

    2017-01-03

    Concerns over mitigating methane leakage from the natural gas system have become ever more prominent in recent years. Recently, the U.S. Environmental Protection Agency proposed regulations requiring use of optical gas imaging (OGI) technologies to identify and repair leaks. In this work, we develop an open-source predictive model to accurately simulate the most common OGI technology, passive infrared (IR) imaging. The model accurately reproduces IR images of controlled methane release field experiments as well as reported minimum detection limits. We show that imaging distance is the most important parameter affecting IR detection effectiveness. In a simulated well-site, over 80% of emissions can be detected from an imaging distance of 10 m. Also, the presence of "superemitters" greatly enhance the effectiveness of IR leak detection. The minimum detectable limits of this technology can be used to selectively target "superemitters", thereby providing a method for approximate leak-rate quantification. In addition, model results show that imaging backdrop controls IR imaging effectiveness: land-based detection against sky or low-emissivity backgrounds have higher detection efficiency compared to aerial measurements. Finally, we show that minimum IR detection thresholds can be significantly lower for gas compositions that include a significant fraction nonmethane hydrocarbons.

  19. Centennial paper: Proteomics in animal science.

    Science.gov (United States)

    Lippolis, J D; Reinhardt, T A

    2008-09-01

    Proteomics holds significant promise as a method for advancing animal science research. The use of this technology in animal science is still in its infancy. The ability of proteomics to simultaneously identify and quantify potentially thousands of proteins is unparalleled. In this review, we will discuss basic principles of doing a proteomic experiment. In addition, challenges and limitations of proteomics will be considered, stressing those that are unique to animal sciences. The current proteomic research in animal sciences will be discussed, and the potential uses for this technology will be highlighted.

  20. Technologies for Proteome-Wide Discovery of Extracellular Host-Pathogen Interactions

    Science.gov (United States)

    2017-01-01

    Pathogens have evolved unique mechanisms to breach the cell surface barrier and manipulate the host immune response to establish a productive infection. Proteins exposed to the extracellular environment, both cell surface-expressed receptors and secreted proteins, are essential targets for initial invasion and play key roles in pathogen recognition and subsequent immunoregulatory processes. The identification of the host and pathogen extracellular molecules and their interaction networks is fundamental to understanding tissue tropism and pathogenesis and to inform the development of therapeutic strategies. Nevertheless, the characterization of the proteins that function in the host-pathogen interface has been challenging, largely due to the technical challenges associated with detection of extracellular protein interactions. This review discusses available technologies for the high throughput study of extracellular protein interactions between pathogens and their hosts, with a focus on mammalian viruses and bacteria. Emerging work illustrates a rich landscape for extracellular host-pathogen interaction and points towards the evolution of multifunctional pathogen-encoded proteins. Further development and application of technologies for genome-wide identification of extracellular protein interactions will be important in deciphering functional host-pathogen interaction networks, laying the foundation for development of novel therapeutics.

  1. Redox proteomics of fat globules unveils broad protein lactosylation and compositional changes in milk samples subjected to various technological procedures.

    Science.gov (United States)

    Arena, Simona; Renzone, Giovanni; Novi, Gianfranco; Scaloni, Andrea

    2011-10-19

    The Maillard reaction between lactose and proteins occurs during thermal treatment of milk and lactosylated β-lactoglobulin, α-lactalbumin and caseins have widely been used to monitor the quality of dairy products. We recently demonstrated that a number of other whey milk proteins essential for nutrient delivery, defense against bacteria/virus and cellular proliferation become lactosylated during milk processing. The extent of their modification is associated with the harshness of product manufacturing. Since fat globule proteins are also highly important for the health-beneficial properties of milk, an evaluation of their lactosylation is crucial for a complete understanding of aliment nutritional characteristics. This is more important when milk is the unique dietary source, as in the infant diet. To this purpose, a sequential proteomic procedure involving an optimized milk fat globule (MFG) preparation/electrophoretic resolution, shot-gun analysis of gel portions for protein identification, selective trapping of lactosylated peptides by phenylboronate chromatography and their analysis by nanoLC-ESI-electron transfer dissociation (ETD) tandem MS was used for systematic characterization of fat globule proteins in milk samples subjected to various manufacturing procedures. Significant MFG protein compositional changes were observed between samples, highlighting the progressive adsorption of caseins and whey proteins on the fat globule surface as result of the technological process used. A significant lactosylation of MFG proteins was observed in ultra-high temperature sterilized and powdered for infant nutrition milk preparations, which well paralleled with the harshness of thermal treatment. Globally, this study allowed the identification of novel 157 non-redundant modification sites and 35 MFG proteins never reported so far as being lactosylated, in addition to the 153 ones ascertained here as present on other 21 MFG-adsorbed proteins whose nature was already

  2. Progress in Nano-Electro-Optics VII Chemical, Biological, and Nanophotonic Technologies for Nano-Optical Devices and Systems

    CERN Document Server

    Ohtsu, Motoichi

    2010-01-01

    This book focuses on chemical and nanophotonic technology to be used to develop novel nano-optical devices and systems. It begins with temperature- and photo-induced phase transition of ferromagnetic materials. Further topics include: energy transfer in artificial photosynthesis, homoepitaxial multiple quantum wells in ZnO, near-field photochemical etching and nanophotonic devices based on a nonadiabatic process and optical near-field energy transfer, respectively and polarization control in the optical near-field for optical information security. Taken as a whole, this overview will be a valuable resource for engineers and scientists working in the field of nano-electro-optics.

  3. Endoscopic optical coherence tomography: technologies and clinical applications [Invited].

    Science.gov (United States)

    Gora, Michalina J; Suter, Melissa J; Tearney, Guillermo J; Li, Xingde

    2017-05-01

    In this paper, we review the current state of technology development and clinical applications of endoscopic optical coherence tomography (OCT). Key design and engineering considerations are discussed for most OCT endoscopes, including side-viewing and forward-viewing probes, along with different scanning mechanisms (proximal-scanning versus distal-scanning). Multi-modal endoscopes that integrate OCT with other imaging modalities are also discussed. The review of clinical applications of endoscopic OCT focuses heavily on diagnosis of diseases and guidance of interventions. Representative applications in several organ systems are presented, such as in the cardiovascular, digestive, respiratory, and reproductive systems. A brief outlook of the field of endoscopic OCT is also discussed.

  4. Adaptive optics scanning laser ophthalmoscope imaging: technology update.

    Science.gov (United States)

    Merino, David; Loza-Alvarez, Pablo

    2016-01-01

    Adaptive optics (AO) retinal imaging has become very popular in the past few years, especially within the ophthalmic research community. Several different retinal techniques, such as fundus imaging cameras or optical coherence tomography systems, have been coupled with AO in order to produce impressive images showing individual cell mosaics over different layers of the in vivo human retina. The combination of AO with scanning laser ophthalmoscopy has been extensively used to generate impressive images of the human retina with unprecedented resolution, showing individual photoreceptor cells, retinal pigment epithelium cells, as well as microscopic capillary vessels, or the nerve fiber layer. Over the past few years, the technique has evolved to develop several different applications not only in the clinic but also in different animal models, thanks to technological developments in the field. These developments have specific applications to different fields of investigation, which are not limited to the study of retinal diseases but also to the understanding of the retinal function and vision science. This review is an attempt to summarize these developments in an understandable and brief manner in order to guide the reader into the possibilities that AO scanning laser ophthalmoscopy offers, as well as its limitations, which should be taken into account when planning on using it.

  5. Importance of high-throughput cell separation technologies for genomics/proteomics-based clinical diagnostics

    Science.gov (United States)

    Leary, James F.; Szaniszlo, Peter; Prow, Tarl W.; Reece, Lisa M.; Wang, Nan; Asmuth, David M.

    2002-06-01

    Gene expression microarray analyses of mixtures of cells approximate a weighted average of the gene expression profiles (GEPs) of each cell type according to its relative abundance in the overall cell sample being analyzed. If the targeted subpopulation of cells is in the minority, or the expected perturbations are marginal, then such changes will be masked by the GEP of the normal/unaffected cells. We show that the GEP of a minor cell subpopulation is often lost when that cell subpopulation is of a frequency less than 30 percent. The GEP is almost always masked by the other cell subpopulations when that frequency drops to 10 percent or less. Several methodologies can be employed to enrich the target cells submitted for microarray analyses. These include magnetic sorting and laser capture microdissection. However, high-throughput flow cytometry/cell sorting overcomes many restrictions of experimental enrichment conditions. This technology can also be used to sort smaller numbers of cells of specific cell subpopulations and subsequently amplify their mRNAs before microarray analyses. When purification techniques are applied to unfixed samples, the potential for changes in gene levels during the process of collection is an additional concern. High-throughput cell separation technologies are needed that can process the necessary number of cells expeditiously in order to avoid such uncontrolled changes in the target cells GEP. In cases where even the use of HTS yields only a small number of cells, the mRNAs (after reverse transcription to cDNA's) must be amplified to yield enough material for conventional microarray analyses. However, the problem of using microamplification PCR methods to expand the amount of cDNAs (from mRNAs) is that it is very difficult to amplify equally all of the mRNAs. Unequal amplification leads to a distorted gene expression profile on the microarray. Linear amplifications is difficult to achieve. Unfortunately, present-day gene-chips need to

  6. Proteomic approaches to biomarker discovery in lung cancers by SELDI technology

    Institute of Scientific and Technical Information of China (English)

    肖雪媛; 卫秀平; 何大澄

    2003-01-01

    The purpose of the present work is to identify protein profiles that could be used to discover specific biomarkers in serum and discriminate lung cancer. Thirty serum samples from patients with lung cancer (15 cases of primary brochogenic carcinoma, 9 cases of metastasis lung cancer and 6 cases of lung cancer after chemotherapy) and twelve from healthy individuals were analyzed by SELDI (Surfaced Enhanced Laser Desorption/Ionization) technology. Anion-exchange columns were used to fractionate the sera with 6 designated pH washing solutions. Two types of protein chip arrays, IMAC-Cu and WCX2, were employed. Protein chips were examined in PBSII ProteinChip Reader (Ciphergen Biosystems Inc.) and the resulting profiles between cancer and normal were analyzed with Biomarker Wizard System. In total, 15 potential lung cancer biomarkers, of which 6 were up-regulated and 9 were down-regulated, were discovered in the serum samples from patients with lung cancer. 5 of 15 these biomarkers were able to be detected on both WCX2 and IMAC-Cu protein chips. The sensitivities provided by the individual markers range from 44.8% to 93.1% and the specificities were 85.0%-94.4%. Our results suggest that serum is a capable resource for detection of lung cancer with specific biomarkers. Moreover, protein chip array system was shown to be a useful tool for identification, as well as detection of disease biomarkers in sera.

  7. Proteomics in Pancreatic Cancer Research

    Directory of Open Access Journals (Sweden)

    Ruihui Geng

    2011-01-01

    Full Text Available Pancreatic cancer is a highly aggressive malignancy with a poor prognosis and deeply affects the life of people. Therefore, the earlier diagnosis and better treatments are urgently needed. In recent years, the proteomic technologies are well established and growing rapidly and have been widely applied in clinical applications, especially in pancreatic cancer research. In this paper, we attempt to discuss the development of current proteomic technologies and the application of proteomics to the field of pancreatic cancer research. This will explore the potential perspective in revealing pathogenesis, making the diagnosis earlier and treatment.

  8. 75 FR 34988 - Notice of Intent To Grant Exclusive Patent License; Fiber Optic Sensor Systems Technology...

    Science.gov (United States)

    2010-06-21

    ... Department of the Navy Notice of Intent To Grant Exclusive Patent License; Fiber Optic Sensor Systems... Navy hereby gives notice of its intent to grant to Fiber Optic Sensor Systems Technology Corporation a.... Patent No. 7,149,374: Fiber Optic Pressure Sensor, Navy Case No. 84,557.//U.S. Patent No. 7,379,630...

  9. 77 FR 73456 - Notice of Intent To Grant Exclusive Patent License; Fiber Optic Sensor Systems Technology...

    Science.gov (United States)

    2012-12-10

    ... Department of the Navy Notice of Intent To Grant Exclusive Patent License; Fiber Optic Sensor Systems... Navy hereby gives notice of its intent to grant to Fiber Optic Sensor Systems Technology Corporation a... described in U.S. Patent No. 7,020,354: Intensity Modulated Fiber Optic Pressure Sensor, Navy Case No. 83...

  10. Deployment of a Testbed in a Brazilian Research Network using IPv6 and Optical Access Technologies

    Science.gov (United States)

    Martins, Luciano; Ferramola Pozzuto, João; Olimpio Tognolli, João; Chaves, Niudomar Siqueira De A.; Reggiani, Atilio Eduardo; Hortêncio, Claudio Antonio

    2012-04-01

    This article presents the implementation of a testbed and the experimental results obtained with it on the Brazilian Experimental Network of the government-sponsored "GIGA Project." The use of IPv6 integrated to current and emerging optical architectures and technologies, such as dense wavelength division multiplexing and 10-gigabit Ethernet on the core and gigabit capable passive optical network and optical distribution network on access, were tested. These protocols, architectures, and optical technologies are promising and part of a brand new worldwide technological scenario that has being fairly adopted in the networks of enterprises and providers of the world.

  11. Evolution of Clinical Proteomics and its Role in Medicine | Office of Cancer Clinical Proteomics Research

    Science.gov (United States)

    NCI's Office of Cancer Clinical Proteomics Research authored a review of the current state of clinical proteomics in the peer-reviewed Journal of Proteome Research. The review highlights outcomes from the CPTC program and also provides a thorough overview of the different technologies that have pushed the field forward. Additionally, the review provides a vision for moving the field forward through linking advances in genomic and proteomic analysis to develop new, molecularly targeted interventions.

  12. X-Ray Pore Optics Technologies and Their Application in Space Telescopes

    OpenAIRE

    Bavdaz, Marcos; Collon, Max; Beijersbergen, Marco; Wallace, Kotska; Wille, Eric

    2010-01-01

    Silicon Pore Optics (SPO) is a new X-ray optics technology under development in Europe, forming the ESA baseline technology for the International X-ray Observatory candidate mission studied jointly by ESA, NASA, and JAXA. With its matrix-like structure, made of monocrystalline-bonded Silicon mirrors, it can achieve the required angular resolution and low mass density required for future large X-ray observatories. Glass-based Micro Pore Optics (MPO) achieve modest angular resolution compared t...

  13. Optical coherence tomography: technology and applications (biological and medical physics, biomedical engineering)

    CERN Document Server

    2013-01-01

    Optical coherence tomography (OCT) is the optical analog of ultrasound imaging and is emerging as a powerful imaging technique that enables non-invasive, in vivo, high resolution, cross-sectional imaging in biological tissue. This book introduces OCT technology and applications not only from an optical and technological viewpoint, but also from biomedical and clinical perspectives. The chapters are written by leading research groups, in a style comprehensible to a broad audience.

  14. Angle-of-arrival reception for optical wireless location technology.

    Science.gov (United States)

    Arafa, Ahmed; Dalmiya, Sumant; Klukas, Richard; Holzman, Jonathan F

    2015-03-23

    An optical wireless location (OWL) system is introduced for indoor positioning. The OWL system makes use of a mobile photoreceiver that facilitates triangulation by measuring angle-of-arrival (AOA) bearings from LEDs in an optical beacon grid. The photoreceiver has three photodiodes (PDs), arranged in a corner-cube, to facilitate differential photocurrent sensing of the incident light AOA, by way of azimuthal ϕ and polar θ angles. The AOA error for indoor positioning is characterized empirically. Optical AOA positioning is shown to have a fundamental advantage over known optical received signal strength (RSS) positioning, as AOA estimation is insensitive to power and alignment imbalances of the optical beacon grid. The OWL system is built, and a performance comparison is carried out between optical AOA and RSS positioning. It is shown that optical AOA positioning can achieve a mean 3-D positioning error of only 5 cm. Experimental design and future prospects of optical AOA positioning are discussed.

  15. Implementation of 3D Optical Scanning Technology for Automotive Applications

    Directory of Open Access Journals (Sweden)

    Abdil Kuş

    2009-03-01

    Full Text Available Reverse engineering (RE is a powerful tool for generating a CAD model from the 3D scan data of a physical part that lacks documentation or has changed from the original CAD design of the part. The process of digitizing a part and creating a CAD model from 3D scan data is less time consuming and provides greater accuracy than manually measuring the part and designing the part from scratch in CAD. 3D optical scanning technology is one of the measurement methods which have evolved over the last few years and it is used in a wide range of areas from industrial applications to art and cultural heritage. It is also used extensively in the automotive industry for applications such as part inspections, scanning of tools without CAD definition, scanning the casting for definition of the stock (i.e. the amount of material to be removed from the surface of the castings model for CAM programs and reverse engineering. In this study two scanning experiments of automotive applications are illustrated. The first one examines the processes from scanning to re-manufacturing the damaged sheet metal cutting die, using a 3D scanning technique and the second study compares the scanned point clouds data to 3D CAD data for inspection purposes. Furthermore, the deviations of the part holes are determined by using different lenses and scanning parameters.

  16. Proteomics in uveal melanoma.

    LENUS (Irish Health Repository)

    Ramasamy, Pathma

    2014-01-01

    Uveal melanoma is the most common primary intraocular malignancy in adults, with an incidence of 5-7 per million per year. It is associated with the development of metastasis in about 50% of cases, and 40% of patients with uveal melanoma die of metastatic disease despite successful treatment of the primary tumour. The survival rates at 5, 10 and 15 years are 65%, 50% and 45% respectively. Unlike progress made in many other areas of cancer, uveal melanoma is still poorly understood and survival rates have remained similar over the past 25 years. Recently, advances made in molecular genetics have improved our understanding of this disease and stratification of patients into low risk and high risk for developing metastasis. However, only a limited number of studies have been performed using proteomic methods. This review will give an overview of various proteomic technologies currently employed in life sciences research, and discuss proteomic studies of uveal melanoma.

  17. Embryology in the era of proteomics.

    Science.gov (United States)

    Katz-Jaffe, Mandy G; McReynolds, Susanna

    2013-03-15

    Proteomic technologies have begun providing evidence that viable embryos possess unique protein profiles. Some of these potential protein biomarkers have been identified as extracellular and could be used in the development of a noninvasive quantitative method for embryo assessment. The field of assisted reproductive technologies would benefit from defining the human embryonic proteome and secretome, thereby expanding our current knowledge of embryonic cellular processes.

  18. New Electronic Technology Applied in Flexible Organic Optical System

    Directory of Open Access Journals (Sweden)

    Andre F. S. Guedes

    2014-02-01

    Full Text Available The synthesis and application of new organic materials, nanostructured, for developing technology based on organic devices, have been the main focus of the scientific community. In recent years, the first polymeric electronics products have entered the market (organic semiconductor materials and there are some electrochromic devices among them that have been called smart windows, once they control the passage of light or heat through a closed environment as an ordinary window. The main functional aspect of electrochromic devices, when being used in architectural and automotive industry, is to control the passage of light and temperature with thermal and visual comfort. These devices can be flexible and very thin, not containing heavy metals, and formed by layers of organic material deposited in several architectures. In this study, the electro-deposition of organic materials in the Polyaniline, PANI case, which provide stability in optical and electrical parameters, was utilized with the means of developing prototypes of organic electrochromic devices. These materials were characterized by: ultraviolet-visible spectroscopy absorption (UV-Vis, measurement of thickness (MT and electrical measurements (EM. This study aims to establish the relationship between the thickness of the active layer and the value of the electrical resistivity of the layer deposited through an electro-deposition technique. The experimental results enabled the equating of the electrical resistivity related to the thickness of the deposited layer. The linear fit of these results has expressed the thickness of the conducting layer, α, and the lowest value of the electrical resistivity, β, associated with the gap between the valence band and the conduction band. Thus, the results have demonstrated that, when the layer of organic material is completely conductive, we may obtain the thickness of the organic material deposited on the substrate.

  19. 蛋白质组学技术在食品品质检测及鉴伪中的应用%Application of Proteomic Technology in Food Quality Detection and Authenticity Identification

    Institute of Scientific and Technical Information of China (English)

    赵方圆; 吴亚君; 韩建勋; 葛毅强; 陈颖

    2012-01-01

    Proteomics technologys has become the important support of the rapid development of modern biological technology, which have been widely applied in the research of food such as food function, quality evaluation, nutritional analysis, safety detection and authenticity identification. Proteomic techniques provide new thoughts and techniques for food science research and offer a very promising prospect. This paper outlines the concept and techniques of proteomics, analyzes the application of proteomic techniques in the food research, and outlooks the prospect of the development of proteomic techniques in food quality detection and authenticity identification.%蛋白质组学技术的发展已经成为现代生物技术快速发展的重要支撑,被广泛地应用到食品功能研究、品质评价、营养分析、安全检测及真伪鉴别等研究中,为食品科学相关研究提供了新的思路和技术,具有很好的发展前景.本文概述了蛋白质组学的概念及主要研究技术,分析了蛋白质组学技术在食品研究中的应用,展望了蛋白质组学技术在食品品质检测及鉴伪中的发展前景.

  20. Analyzing the platelet proteome.

    Science.gov (United States)

    García, Angel; Zitzmann, Nicole; Watson, Steve P

    2004-08-01

    During the last 10 years, mass spectrometry (MS) has become a key tool for protein analysis and has underpinned the emerging field of proteomics. Using high-throughput tandem MS/MS following protein separation, it is potentially possible to analyze hundreds to thousands of proteins in a sample at a time. This technology can be used to analyze the protein content (i.e., the proteome) of any cell or tissue and complements the powerful field of genomics. The technology is particularly suitable for platelets because of the absence of a nucleus. Cellular proteins can be separated by either gel-based methods such as two-dimensional gel electrophoresis or one-dimensional sodium dodecyl sulfate polyacrylamide gel electrophoresis followed by liquid chromatography (LC) -MS/MS or by multidimensional LC-MS/MS. Prefractionation techniques, such as subcellular fractionations or immunoprecipitations, can be used to improve the analysis. Each method has particular advantages and disadvantages. Proteomics can be used to compare the proteome of basal and diseased platelets, helping to reveal information on the molecular basis of the disease.

  1. Large core plastic planar optical splitter fabricated by 3D printing technology

    Science.gov (United States)

    Prajzler, Václav; Kulha, Pavel; Knietel, Marian; Enser, Herbert

    2017-10-01

    We report on the design, fabrication and optical properties of large core multimode optical polymer splitter fabricated using fill up core polymer in substrate that was made by 3D printing technology. The splitter was designed by the beam propagation method intended for assembling large core waveguide fibers with 735 μm diameter. Waveguide core layers were made of optically clear liquid adhesive, and Veroclear polymer was used as substrate and cover layers. Measurement of optical losses proved that the insertion optical loss was lower than 6.8 dB in the visible spectrum.

  2. 40-Gb/s all-optical processing systems using hybrid photonic integration technology

    DEFF Research Database (Denmark)

    Kehayas, E.; Tsiokos, D.I.; Bakopoulos, P.;

    2006-01-01

    This paper presents an experimental performance characterization of all-optical subsystems at 40 Gb/s using interconnected hybrid integrated all-optical semiconductor optical amplifier (SOA) Mach-Zehnder interferometer (MZI) gates and flip-flop prototypes. It was shown that optical gates can...... the potential that all-optical technology can find application in future data-centric networks with efficient and dynamic bandwidth utilization. This paper also reports on the latest photonic integration breakthroughs as a potential migration path for reducing fabrication cost by developing photonic systems...

  3. Optics Technologies for LUVOIR & HabEx: Polarization & Mirror Count

    Science.gov (United States)

    Breckinridge, James B.

    2017-01-01

    We show that polarization aberrations and mirror count will limit the optical system performance of LUVOIR and HabEx and thus both their exoplanet science yield and their UV science. In addition we show how increased mirror count reduces optical system transmittance and increases cost in large aperture telescopes. We make the observation that orthogonally polarized light does not interfere to form an intensity image. We show how the two polarization aberrations (diattenuation & and retardance) distort the system PSF, decrease transmittance, and increase the unwanted background above that predicted using scalar models. An optical system corrected for geometric path difference errors is a necessary but not sufficient condition for the perfect image formation needed to directly image terrestrial exoplanets. Geometric (trigonometric) path difference errors are controlled using adaptive optics (tip-tilt & wavefront), active metrology and precision pointing. However, image quality is also determined by several physical optics factors: diffraction, polarization, partial coherence, and chromatism all of which degrade image quality and are not corrected through the control of geometric path difference. The source of physical optics errors lies in the opto-mechanical packaging of optical elements, masks, stops and the thin film coatings needed to obtain high transmittance. Adaptive optics corrects wavefront errors described by geometric or optical path length errors but not those wavefront errors introduced by physical optics. We show that for large telescopes each reflection costs over $100 million to increase the collecting area in order to recover lost SNR. Examples will be shown. The LUVOIR and HabEx systems will need fewer optical surfaces than current systems

  4. Proteomics Characterization of Exosome Cargo

    OpenAIRE

    Schey, Kevin L.; Luther, J. Matthew; Rose, Kristie L

    2015-01-01

    Characterization of exosomal cargo is of significant interest because this cargo can provide clues to exosome biogenesis, targeting, and cellular effects and may be a source of biomarkers for disease diagnosis, prognosis and response to treatment. With recent improvements in proteomics technologies, both qualitative and quantitative characterization of exosomal proteins is possible. Here we provide a brief review of exosome proteomics studies and provide detailed protocols for global qualitat...

  5. Technologies for all-optical wavelength conversion in DWDM networks

    DEFF Research Database (Denmark)

    Wolfson, David; Fjelde, Tina; Kloch, Allan

    2001-01-01

    Different techniques for all-optical wavelength conversion are reviewed and the advantages and disadvantages seen from a system perspective are highlighted. All-optical wavelength conversion will play a major role in making cost-effective network nodes in future high-speed WDM networks, where fun...

  6. Diagnostic Proteomics: Serum Proteomic Patterns for the Detection of Early Stage Cancers

    Directory of Open Access Journals (Sweden)

    Li-Rong Yu

    2004-01-01

    Full Text Available The ability to interrogate thousands of proteins found in complex biological samples using proteomic technologies has brought the hope of discovering novel disease-specific biomarkers. While most proteomic technologies used to discover diagnostic biomarkers are quite sophisticated, "proteomic pattern analysis" has emerged as a simple, yet potentially revolutionary, method for the early diagnosis of diseases. Utilizing this technology, hundreds of clinical samples can be analyzed per day and several preliminary studies suggest proteomic pattern analysis has the potential to be a novel, highly sensitive diagnostic tool for the early detection of cancer.

  7. Broadband Optical Access Technologies to Converge towards a Broadband Society in Europe

    Science.gov (United States)

    Coudreuse, Jean-Pierre; Pautonnier, Sophie; Lavillonnière, Eric; Didierjean, Sylvain; Hilt, Benoît; Kida, Toshimichi; Oshima, Kazuyoshi

    This paper provides insights on the status of broadband optical access market and technologies in Europe and on the expected trends for the next generation optical access networks. The final target for most operators, cities or any other player is of course FTTH (Fibre To The Home) deployment although we can expect intermediate steps with copper or wireless technologies. Among the two candidate architectures for FTTH, PON (Passive Optical Network) is by far the most attractive and cost effective solution. We also demonstrate that Ethernet based optical access network is very adequate to all-IP networks without any incidence on the level of quality of service. Finally, we provide feedback from a FTTH pilot network in Colmar (France) based on Gigabit Ethernet PON technology. The interest of this pilot lies on the level of functionality required for broadband optical access networks but also on the development of new home network configurations.

  8. Exabits/s integrated photonic interconnection technology for flexible data-centric optical networks

    Science.gov (United States)

    Binh, Le N.; Tao, Thomas W.; Ning, Gordon L.

    2016-03-01

    Optical networking is evolving from classical service-provider base data-center centric (DCC) internetworking environment with massive capacity, hence demanding novel optical switching and interconnecting technologies. The traditional telecom networks are under a flattening transformation to meet challenges from DCC networks for massive capacity serving in order of multi-Pb/s. We present proposed distributed and concentric data center based networks and the essential optical interconnection technologies, from the photonic kernels to electronic and optoelectronic server clusters, in both passive and active structures. Optical switching devices and integrated matrices are proposed composing of tunable (bandwidth and center wavelength) optical filters and switches as well as resonant microring modulators (μRM)(switching and spectral demux/mux) for multi-wavelength flexible-bandwidth optical channels of aggregate capacity reaching Ebps. The design principles and some experimental results are also reported.

  9. Application and the key technology on high power fiber-optic laser in laser weapon

    Science.gov (United States)

    Qu, Zhou; Li, Qiushi; Meng, Haihong; Sui, Xin; Zhang, Hongtao; Zhai, Xuhua

    2014-12-01

    The soft-killing laser weapon plays an important role in photoelectric defense technology. It can be used for photoelectric detection, search, blinding of photoelectric sensor and other devices on fire control and guidance devices, therefore it draws more and more attentions by many scholars. High power fiber-optic laser has many virtues such as small volume, simple structure, nimble handling, high efficiency, qualified light beam, easy thermal management, leading to blinding. Consequently, it may be used as the key device of soft-killing laser weapon. The present study introduced the development of high power fiber-optic laser and its main features. Meanwhile the key technology of large mode area (LMA) optical fiber design, the beam combination technology, double-clad fiber technology and pumping optical coupling technology was stated. The present study is aimed to design high doping LMA fiber, ensure single mode output by increasing core diameter and decrease NA. By means of reducing the spontaneous emission particle absorbed by fiber core and Increasing the power density in the optical fiber, the threshold power of nonlinear effect can increase, and the power of single fiber will be improved. Meantime, high power will be obtained by the beam combination technology. Application prospect of high power fiber laser in photoelectric defense technology was also set forth. Lastly, the present study explored the advantages of high power fiber laser in photoelectric defense technology.

  10. Computer-assisted optics teaching at the Moscow Institute of Physics and Technology

    Science.gov (United States)

    Soboleva, Natalia N.; Kozel, Stanislav M.; Lockshin, Gennady R.; Entin, M. A.; Galichsky, K. V.; Lebedinsky, P. L.; Zhdanovich, P. M.

    1995-10-01

    Traditional methods used in optics teaching lack clarity and vividness when illustrating abstract notions such as polarization or interference. Here's where computer models may help, but they usually show only a single phenomenon or process and don't let the student see the entire picture. For this reason at Moscow Institute of Physics and Technology was developed the courseware 'Wave Optics on the Computer' consisting of a number of related simulations. It is intended for students studying optics at the Universities. Recently we have developed different simulations in optics for secondary school level. They are included as part of large computer courseware 'Physics by Pictures'. The courseware 'Wave Optics on the Computer' consists of nine large simulation programs and the textbook. The programs are simulating basic phenomena of wave optics. parameters of optical systems can be varied by the user. The textbook contains theoretical considerations on studied optical phenomena, recommendations concerning work with computer programs, and, especially for those wishing to deeper understand wave optics, original problems for individual solution. At the Moscow Institute of Physics and Technology the course 'Wave Optics on the Computer' is used for teaching optics in the course of general physics. The course provides both the computer assisted teaching for lectures support and computer assisted learning for students during seminars in the computer classroom.

  11. Design of an All-Optical Network Based on LCoS Technologies

    Science.gov (United States)

    Cheng, Yuh-Jiuh; Shiau, Yhi

    2016-06-01

    In this paper, an all-optical network composed of the ROADMs (reconfigurable optical add-drop multiplexer), L2/L3 optical packet switches, and the fiber optical cross-connection for fiber scheduling and measurement based on LCoS (liquid crystal on silicon) technologies is proposed. The L2/L3 optical packet switches are designed with optical output buffers. Only the header of optical packets is converted to electronic signals to control the wavelength of input ports and the packet payloads can be transparently destined to their output ports. An optical output buffer is designed to queue the packets when more than one incoming packet should reach to the same destination output port. For preserving service-packet sequencing and fairness of routing sequence, a priority scheme and a round-robin algorithm are adopted at the optical output buffer. The wavelength of input ports is designed for routing incoming packets using LCoS technologies. Finally, the proposed OFS (optical flow switch) with input buffers can quickly transfer the big data to the output ports and the main purpose of the OFS is to reduce the number of wavelength reflections. The all-optical content delivery network is comprised of the OFSs for a large amount of audio and video data transmissions in the future.

  12. Laser Communications and Fiber Optics Lab Manual. High-Technology Training Module.

    Science.gov (United States)

    Biddick, Robert

    This laboratory training manual on laser communications and fiber optics may be used in a general technology-communications course for ninth graders. Upon completion of this exercise, students achieve the following goals: match concepts with laser communication system parts; explain advantages of fiber optic cable over conventional copper wire;…

  13. Living Brain Optical Imaging: Technology, Methods and Applications

    Science.gov (United States)

    Tsytsarev, Vassiliy; Bernardelli, Chad; Maslov, Konstantin I.

    2017-01-01

    Within the last few decades, optical imaging methods have yielded revolutionary results when applied to all parts of the central nervous system. The purpose of this review is to analyze research possibilities and limitations of several novel imaging techniques and show some of the most interesting achievements obtained by these methods. Here we covered intrinsic optical imaging, voltage-sensitive dye, photoacoustic, optical coherence tomography, near-infrared spectroscopy and some other techniques. All of them are mainly applicable for experimental neuroscience but some of them also suitable for the clinical studies.

  14. New paradigm for rapid production of large precision optics: frozen membrane mirror technology

    Science.gov (United States)

    Lieber, Mike; Kendrick, Stephen; Lipscy, Sarah; Ebbets, Dennis; Acton, Scott; Knight, Scott

    2013-09-01

    Traditional mirror manufacturing, particularly for astronomical purposes, requires substantial lead time, due to the nature of the materials and the grinding/polishing process. We propose a new technique for rapid, low-cost production of large, lightweight precision optics by fusing several technologies which in combination we call frozen membrane mirror technology (FMMT). FMMT combines well-understood subsystem technologies, including electrostatic control of membrane mirrors, adaptive optics, wavefront sensing and control, and inflatable structures technology to shorten production time. The basic technique is to control the surface of a reflective coated membrane mirror with electrostatic actuation and wavefront sensor feedback and freeze the membrane shape. We discuss the details of the concept and present results of early lab testing. We focus on the optical regime, but this technology has applicability from the microwave to x-ray spectral bands. Starting with a flexible membrane mirror, one can envision techniques for deployment of large apertures in space.

  15. Initial technology assessment for the Large-Aperture UV-Optical-Infrared (LUVOIR) mission concept study

    Science.gov (United States)

    Bolcar, Matthew R.; Feinberg, Lee; France, Kevin; Rauscher, Bernard J.; Redding, David; Schiminovich, David

    2016-07-01

    The NASA Astrophysics Division's 30-Year Roadmap prioritized a future large-aperture space telescope operating in the ultra-violet/optical/infrared wavelength regime. The Association of Universities for Research in Astronomy envisioned a similar observatory, the High Definition Space Telescope. And a multi-institution group also studied the Advanced Technology Large Aperture Space Telescope. In all three cases, a broad science case is outlined, combining general astrophysics with the search for biosignatures via direct-imaging and spectroscopic characterization of habitable exoplanets. We present an initial technology assessment that enables such an observatory that is currently being studied for the 2020 Decadal Survey by the Large UV/Optical/Infrared (LUVOIR) surveyor Science and Technology Definition Team. We present here the technology prioritization for the 2016 technology cycle and define the required technology capabilities and current state-of-the-art performance. Current, planned, and recommended technology development efforts are also reported.

  16. Initial Technology Assessment for the Large-Aperture UV-Optical-Infrared (LUVOIR) Mission Concept Study

    Science.gov (United States)

    Bolcar, Matthew R.; Feinberg, Lee; France, Kevin; Rauscher, Bernard J.; Redding, David; Schiminovich, David

    2016-01-01

    The NASA Astrophysics Division's 30-Year Roadmap prioritized a future large-aperture space telescope operating in the ultra-violet/optical/infrared wavelength regime. The Association of Universities for Research in Astronomy envisioned a similar observatory, the High Definition Space Telescope. And a multi-institution group also studied the Advanced Technology Large Aperture Space Telescope. In all three cases, a broad science case is outlined, combining general astrophysics with the search for biosignatures via direct-imaging and spectroscopic characterization of habitable exoplanets. We present an initial technology assessment that enables such an observatory that is currently being studied for the 2020 Decadal Survey by the Large UV/Optical/Infrared (LUVOIR) surveyor Science and Technology Definition Team. We present here the technology prioritization for the 2016 technology cycle and define the required technology capabilities and current state-of-the-art performance. Current, planned, and recommended technology development efforts are also reported.

  17. Initial Technology Assessment for the Large UV-Optical-Infrared (LUVOIR) Mission Concept Study

    Science.gov (United States)

    Bolcar, Matthew R.; Feinberg, Lee D.; France, Kevin; Rauscher, Bernard J.; Redding, David; Schiminovich, David

    2016-01-01

    The NASA Astrophysics Divisions 30-Year Roadmap prioritized a future large-aperture space telescope operating in the ultra-violet-optical-infrared wavelength regime. The Association of Universities for Research in Astronomy envisioned a similar observatory, the High Definition Space Telescope. And a multi-institution group also studied the Advanced Technology Large Aperture Space Telescope. In all three cases, a broad science case is outlined, combining general astrophysics with the search for bio-signatures via direct-imaging and spectroscopic characterization of habitable exo-planets. We present an initial technology assessment that enables such an observatory that is currently being studied for the 2020 Decadal Survey by the Large UV-Optical Infrared (LUVOIR) surveyor Science and Technology Definition Team. We present here the technology prioritization for the 2016 technology cycle and define the required technology capabilities and current state-of-the-art performance. Current, planned, and recommended technology development efforts are also reported.

  18. Optical technologies in extended-reach access networks

    DEFF Research Database (Denmark)

    Wong, Elaine; Amaya Fernández, Ferney Orlando; Tafur Monroy, Idelfonso

    2009-01-01

    The merging of access and metro networks has been proposed as a solution to lower the unit cost of customer bandwidth. This paper reviews some of the recent advances and challenges in extended-reach optical access networks....

  19. Long-focus reflective optical elements for technological application

    Science.gov (United States)

    Tolstopyatov, Eugene M.

    1998-09-01

    Simple and cheap long-focus optical systems consisting of cylindrical mirrors are proposed to use in processes of laser processing of materials (cutting, welding, thin film deposition by evaporation). Methods of calculation of the focusing systems of this type are developed and aberrations are estimated. Optical system was used as a part of installation for thin alloys and polymer films deposition as well as for manufacturing PTFE wool and PTFE porous material.

  20. Differential expression of equine muscle biopsy proteins during normal training and intensified training in young standardbred horses using proteomics technology.

    Science.gov (United States)

    Bouwman, Freek G; van Ginneken, Mireille M E; Noben, Jean-Paul; Royackers, Erik; de Graaf-Roelfsema, Ellen; Wijnberg, Inge D; van der Kolk, Johannes H; Mariman, Edwin C M; van Breda, Eric

    2010-03-01

    The major aim of the present study was to investigate the proteome of standardbred horses at different stages of training and intensified training. We searched for biomarkers using small skeletal muscle biopsies of live animals. 2D gel electrophoresis and mass spectrometry were successfully applied to investigate training-induced differential expression of equine muscle biopsy proteins. Despite the poor resolution of the equine genome and proteome, we were able to identify the proteins of 20 differential spots representing 16 different proteins. Evaluation of those proteins complies with adaptation of the skeletal muscle after normal training involving structural changes towards a higher oxidative capacity, an increased capacity to take up long-chain fatty acids, and to store energy in the form of glycogen. Intensified training leads to additional changed spots. Alpha-1-antitrypsin was found increased after intensified training but not after normal training. This protein may thus be considered as a marker for overtraining in horses and also linked to overtraining in human athletes. Copyright 2009 Elsevier Inc. All rights reserved.

  1. Multi terabits/s optical access transport technologies

    Science.gov (United States)

    Binh, Le Nguyen; Wang Tao, Thomas; Livshits, Daniil; Gubenko, Alexey; Karinou, Fotini; Liu Ning, Gordon; Shkolnik, Alexey

    2016-02-01

    Tremendous efforts have been developed for multi-Tbps over ultra-long distance and metro and access optical networks. With the exponential increase demand on data transmission, storage and serving, especially the 5G wireless access scenarios, the optical Internet networking has evolved to data-center based optical networks pressuring on novel and economical access transmission systems. This paper reports (1) Experimental platforms and transmission techniques employing band-limited optical components operating at 10G for 100G based at 28G baud. Advanced modulation formats such as PAM-4, DMT, duo-binary etc are reported and their advantages and disadvantages are analyzed so as to achieve multi-Tbps optical transmission systems for access inter- and intra- data-centered-based networks; (2) Integrated multi-Tbps combining comb laser sources and micro-ring modulators meeting the required performance for access systems are reported. Ten-sub-carrier quantum dot com lasers are employed in association with wideband optical intensity modulators to demonstrate the feasibility of such sources and integrated micro-ring modulators acting as a combined function of demultiplexing/multiplexing and modulation, hence compactness and economy scale. Under the use of multi-level modulation and direct detection at 56 GBd an aggregate of higher than 2Tbps and even 3Tbps can be achieved by interleaved two comb lasers of 16 sub-carrier lines; (3) Finally the fundamental designs of ultra-compacts flexible filters and switching integrated components based on Si photonics for multi Tera-bps active interconnection are presented. Experimental results on multi-channels transmissions and performances of optical switching matrices and effects on that of data channels are proposed.

  2. Optical sensor technology for simultaneous measurement of particle speed and concentration of micro sized particles

    DEFF Research Database (Denmark)

    Clausen, Casper; Han, Anpan; Kristensen, Martin

    2013-01-01

    Experimental characterization of a sensor technology that can measure particle speed and concentration simultaneously in liquids and gases is presented here. The basic sensor principle is based on an optical element that shapes a light beam into well-defined fringes. The technology can be described...... independently from particle speeds and is a key advantage compared to normal Laser Particle Counters....

  3. Comparison of different technologies for high-quality optical coatings

    Science.gov (United States)

    Flory, Francois

    1990-08-01

    Modern optical systems require still higher quality optical coatings. Conventional production techniques are not able to give such high quality layers. One of the main defaults comes from the relatively porous structure of the thin films; as a consequence the sensitiveness of the materials to the moisture gives noticeably unstable properties versus time. In this work, after a very short review of the different techniques nowaday used to perform high quality optical thin films, we will be especially interested in oxide layer production (Si02, Ta2O5, Ti02). To give a good comparison of the performances obtained with techniques such as TAD and ion plating we need extremely powerful characterization means: - In vacuo measurements of optical properties allowing the study of spontaneous water adsorption during air entrance; - Absorption measurement with photothermal deflection spectroscopy; - Scattering losses measurements and consequently determination of the grain size of the microstructure. Refractive index measurements, and optical anisotropy determined by guided mode study. Finally some views from electron microscopy justify the validity of the model used with our characterization techniques. To end, we will show the interest of ion plating technique when we are looking for very uniform deposition on large surfaces.

  4. US long distance fiber optic networks: Technology, evolution and advanced concepts. Volume 1: Executive summary

    Science.gov (United States)

    1986-01-01

    Over the past two decades, fiber optics has emerged as a highly practical and cost-efficient communications technology. Its competitiveness vis-a-vis other transmission media, especially satellite, has become a critical question. This report studies the likely evolution and application of fiber optic networks in the United States to the end of the century. The outlook for the technology of fiber systems is assessed and forecast, scenarios of the evolution of fiber optic network development are constructed, and costs to provide service are determined and examined parametrically as a function of network size and traffic carried. Volume 1 consists of the Executive Summary. Volume 2 focuses on fiber optic technology and long distance fiber optic networks. Volume 3 develops a traffic and financial model of a nationwide long distance transmission network. Among the study's most important conclusions are: revenue requirements per circuit for LATA-to-LATA fiber optic links are less than one cent per call minute; multiplex equipment, which is likely to be required in any competing system, is the largest contributor to circuit costs; the potential capacity of fiber optic cable is very large and as yet undefined; and fiber optic transmission combined with other network optimization schemes can lead to even lower costs than those identified in this study.

  5. Hybrid Ground Station Technology for RF and Optical Communication Links

    Science.gov (United States)

    Davarian, Faramaz; Hoppe, D.; Charles, J.; Vilnrotter, V.; Sehic, A.; Hanson, T.; Gam, E.

    2012-01-01

    To support future enhancements of NASA's deep space and planetary communications and tracking services, the Jet Propulsion Laboratory is developing a hybrid ground station that will be capable of simultaneously supporting RF and optical communications. The main reason for adding optical links to the existing RF links is to significantly increase the capacity of deep space communications in support of future solar system exploration. It is envisioned that a mission employing an optical link will also use an RF link for telemetry and emergency purposes, hence the need for a hybrid ground station. A hybrid station may also reduce operations cost by requiring fewer staff than would be required to operate two stations. A number of approaches and techniques have been examined. The most promising ones have been prototyped for field examination and validation.

  6. Novel Progress in Rewritable High Density Optical Data Storage Technology

    Institute of Scientific and Technical Information of China (English)

    2005-01-01

    @@ In collaboration with colleagues at the University of Science and Technology of China and East China University of Science and Technology, CAS researchers from the Institute of Chemistry have synthesized a novel spironaphthoxazine SOFC molecule with a stable ringopened photomerocyanine form by incorporating a ferrocene moiety to the parent spironaphthoxazine. Their work has been reported in a recent issue of Advanced Materials.

  7. Silicon technology compatible photonic molecules for compact optical signal processing

    Energy Technology Data Exchange (ETDEWEB)

    Barea, Luis A. M., E-mail: barea@ifi.unicamp.br; Vallini, Felipe; Jarschel, Paulo F.; Frateschi, Newton C. [Device Research Laboratory, Applied Physics Department, “GlebWataghin” Physics Institute, University of Campinas–UNICAMP, 13083-859 Campinas, SP (Brazil)

    2013-11-11

    Photonic molecules (PMs) based on multiple inner coupled microring resonators allow to surpass the fundamental constraint between the total quality factor (Q{sub T}), free spectral range (FSR), and resonator size. In this work, we use a PM that presents doublets and triplets resonance splitting, all with high Q{sub T}. We demonstrate the use of the doublet splitting for 34.2 GHz signal extraction by filtering the sidebands of a modulated optical signal. We also demonstrate that very compact optical modulators operating 2.75 times beyond its resonator linewidth limit may be obtained using the PM triplet splitting, with separation of ∼55 GHz.

  8. Interactive educational technologies as a method of communicative competency development of optical and fiber optic communication systems specialists

    Science.gov (United States)

    Matveeva, Tatiana U.; Osadchiy, Igor S.; Husnutdinova, Marina N.

    2017-04-01

    The article examines the process of formation of communicative competencies of optic and fiber optic communication systems specialists; the role of communicative competencies is examined in the structure of professionally important skills, together with the contents of professional activity. The stages of empirical research into formation of communicative competencies have been presented, and the values of statistical reliability of data have been provided. The model of formation of communicative competency using interactive technology has been developed based on the research done, and main stages of model implementation and motives of formation of communicative competency have been highlighted. A scheme of "Communicative competence as a base of future success" training session has been suggested as one of the basic interactive technologies. Main components of education that are used during the stages of the training cycle have been examined. The statistical data on the effectiveness of use of interactive educational technologies has been presented; it allowed development of communicative competency of specialists in the field of optical and fiber optic communication system.

  9. Analysis of mass spectrometry data in proteomics

    DEFF Research Database (Denmark)

    Matthiesen, Rune; Jensen, Ole N

    2008-01-01

    that in turn allow protein identification, annotation of secondary modifications, and determination of the absolute or relative abundance of individual proteins. Advances in mass spectrometry-driven proteomics rely on robust bioinformatics tools that enable large-scale data analysis. This chapter describes......The systematic study of proteins and protein networks, that is, proteomics, calls for qualitative and quantitative analysis of proteins and peptides. Mass spectrometry (MS) is a key analytical technology in current proteomics and modern mass spectrometers generate large amounts of high-quality data...... some of the basic concepts and current approaches to the analysis of MS and MS/MS data in proteomics....

  10. Miniature and Molecularly Specific Optical Screening Technologies for Breast Cancer

    Science.gov (United States)

    2008-10-01

    and molecular contrast in breast cancer V. Millon SR, Provenzano PP, Elicieri, KW, Brown, JQ, Keely, PJ, Ramanujam, N. "Imaging of ALA-induced PpIX...calculating tissue optical properties. Part I: Theory and validation on synthetic phantoms. Appl Opt, 2006. 45(5): p. 1062-71. 4. Baumann, M., C

  11. Future technologies for optical and infrared telescopes and instruments

    Science.gov (United States)

    Cunningham, Colin

    2009-08-01

    The theme of this conference is the evolution of telescopes over the last 400 years. I present my view on what the major leaps of technology have been, and attempt to predict what new technologies could come along in the next 50 years to change the way we do astronomy and help us make new discoveries. Are we approaching a peak of innovation and discovery, and will this be followed by a slow decline? Or are there prospects for even further technology leaps and consequent new discoveries? Will global resource and financial crises bring an end to our great ambitions, or will we continue with bigger telescopes and more ambitious space observatories?

  12. Genomes to Proteomes

    Energy Technology Data Exchange (ETDEWEB)

    Panisko, Ellen A. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Grigoriev, Igor [USDOE Joint Genome Inst., Walnut Creek, CA (United States); Daly, Don S. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Webb-Robertson, Bobbie-Jo [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Baker, Scott E. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States)

    2009-03-01

    Biologists are awash with genomic sequence data. In large part, this is due to the rapid acceleration in the generation of DNA sequence that occurred as public and private research institutes raced to sequence the human genome. In parallel with the large human genome effort, mostly smaller genomes of other important model organisms were sequenced. Projects following on these initial efforts have made use of technological advances and the DNA sequencing infrastructure that was built for the human and other organism genome projects. As a result, the genome sequences of many organisms are available in high quality draft form. While in many ways this is good news, there are limitations to the biological insights that can be gleaned from DNA sequences alone; genome sequences offer only a bird's eye view of the biological processes endemic to an organism or community. Fortunately, the genome sequences now being produced at such a high rate can serve as the foundation for other global experimental platforms such as proteomics. Proteomic methods offer a snapshot of the proteins present at a point in time for a given biological sample. Current global proteomics methods combine enzymatic digestion, separations, mass spectrometry and database searching for peptide identification. One key aspect of proteomics is the prediction of peptide sequences from mass spectrometry data. Global proteomic analysis uses computational matching of experimental mass spectra with predicted spectra based on databases of gene models that are often generated computationally. Thus, the quality of gene models predicted from a genome sequence is crucial in the generation of high quality peptide identifications. Once peptides are identified they can be assigned to their parent protein. Proteins identified as expressed in a given experiment are most useful when compared to other expressed proteins in a larger biological context or biochemical pathway. In this chapter we will discuss the automatic

  13. Physics and technology development of multilayer EUV reflective optics

    NARCIS (Netherlands)

    Louis, E.

    2012-01-01

    This thesis describes the development of molybdenum/silicon based multilayer reflective elements for the Extreme UV wavelength range, as motivated by their application in photolithography for semiconductor manufacturing. The thesis reflects the basic thin film physics, technological developments, an

  14. Proteomic classification of breast cancer.

    LENUS (Irish Health Repository)

    Kamel, Dalia

    2012-11-01

    Being a significant health problem that affects patients in various age groups, breast cancer has been extensively studied to date. Recently, molecular breast cancer classification has advanced significantly with the availability of genomic profiling technologies. Proteomic technologies have also advanced from traditional protein assays including enzyme-linked immunosorbent assay, immunoblotting and immunohistochemistry to more comprehensive approaches including mass spectrometry and reverse phase protein lysate arrays (RPPA). The purpose of this manuscript is to review the current protein markers that influence breast cancer prediction and prognosis and to focus on novel advances in proteomic classification of breast cancer.

  15. Personalized medicine beyond genomics: alternative futures in big data-proteomics, environtome and the social proteome.

    Science.gov (United States)

    Özdemir, Vural; Dove, Edward S; Gürsoy, Ulvi K; Şardaş, Semra; Yıldırım, Arif; Yılmaz, Şenay Görücü; Ömer Barlas, I; Güngör, Kıvanç; Mete, Alper; Srivastava, Sanjeeva

    2017-01-01

    No field in science and medicine today remains untouched by Big Data, and psychiatry is no exception. Proteomics is a Big Data technology and a next generation biomarker, supporting novel system diagnostics and therapeutics in psychiatry. Proteomics technology is, in fact, much older than genomics and dates to the 1970s, well before the launch of the international Human Genome Project. While the genome has long been framed as the master or "elite" executive molecule in cell biology, the proteome by contrast is humble. Yet the proteome is critical for life-it ensures the daily functioning of cells and whole organisms. In short, proteins are the blue-collar workers of biology, the down-to-earth molecules that we cannot live without. Since 2010, proteomics has found renewed meaning and international attention with the launch of the Human Proteome Project and the growing interest in Big Data technologies such as proteomics. This article presents an interdisciplinary technology foresight analysis and conceptualizes the terms "environtome" and "social proteome". We define "environtome" as the entire complement of elements external to the human host, from microbiome, ambient temperature and weather conditions to government innovation policies, stock market dynamics, human values, political power and social norms that collectively shape the human host spatially and temporally. The "social proteome" is the subset of the environtome that influences the transition of proteomics technology to innovative applications in society. The social proteome encompasses, for example, new reimbursement schemes and business innovation models for proteomics diagnostics that depart from the "once-a-life-time" genotypic tests and the anticipated hype attendant to context and time sensitive proteomics tests. Building on the "nesting principle" for governance of complex systems as discussed by Elinor Ostrom, we propose here a 3-tiered organizational architecture for Big Data science such as

  16. Review of ultra-high density optical storage technologies for big data center

    Science.gov (United States)

    Hao, Ruan; Liu, Jie

    2016-10-01

    In big data center, optical storage technologies have many advantages, such as energy saving and long lifetime. However, how to improve the storage density of optical storage is still a huge challenge. Maybe the multilayer optical storage technology is the good candidate for big data center in the years to come. Due to the number of layers is primarily limited by transmission of each layer, the largest capacities of the multilayer disc are around 1 TB/disc and 10 TB/ cartridge. Holographic data storage (HDS) is a volumetric approach, but its storage capacity is also strictly limited by the diffractive nature of light. For a holographic disc with total thickness of 1.5mm, its potential capacities are not more than 4TB/disc and 40TB/ cartridge. In recent years, the development of super resolution optical storage technology has attracted more attentions. Super-resolution photoinduction-inhibition nanolithography (SPIN) technology with 9 nm feature size and 52nm two-line resolution was reported 3 years ago. However, turning this exciting principle into a real storage system is a huge challenge. It can be expected that in the future, the capacities of 10TB/disc and 100TB/cartridge can be achieved. More importantly, due to breaking the diffraction limit of light, SPIN technology will open the door to improve the optical storage capacity steadily to meet the need of the developing big data center.

  17. Silicon photonic switch technology for optical networks in telecom and datacom areas

    Science.gov (United States)

    Nakamura, Shigeru; Yanagimachi, Shigeyuki; Takeshita, Hitoshi; Tajima, Akio

    2017-01-01

    As a promising platform technology for optical switches, silicon photonics is recently attracting much attention. In this paper, we demonstrate compact 8 × 8 silicon photonic switch modules with low loss, low polarization sensitivity, and low cross-talk properties. An optical circuit including 152 thermo-optical switch elements and spot size converters were formed within a silicon chip size of 12 mm × 14 mm. The developed module where a silicon photonic chip was assembled with a fiber array showed about 6-dB average excess optical loss, including optical coupling loss, on all 64 paths of the 8 × 8 optical switch. Measured polarization dependent loss was about 0.6 dB on average over 64 paths and cross-talk was less than -35 dB. These optical switch modules are intended for applying to ROADMs in telecom optical networks, but, the port count extensibility using multiple compact modules and the faster switching capability of the optical switch are also useful for datacenter applications where hybrid network scheme with electronic packet switches and optical circuit switches is intensively investigated.

  18. Optical Fiber Sensor Technologies for Efficient and Economical Oil Recovery

    Energy Technology Data Exchange (ETDEWEB)

    Wang, a.; Pickrell, G.; Xiao, H.; May, r.

    2003-02-27

    The overall goal of this project was to develop reliable cost effective sensors for application in the down-hole environment. The physical parameters measured by these sensors were temperature, pressure, flow and acoustic signals. Sensor head configurations for each of the physical measurands were optimized to increase the sensitivity to the particular measurand of interest while decreasing the cross-sensitivity to the other physical measurands and to environmental influences. In addition, the optical signal demodulation electronics was designed to be insensitive to environmental influences while maintaining the required resolution, precision and accuracy of the parameter being sensed. The influence of potentially detrimental agents such as water in the down-hole environment was investigated as well as methods to protect both the optical fiber and the sensor from these detrimental effects.

  19. Optical technologies for the observation of low Earth orbit objects

    CERN Document Server

    Hampf, Daniel; Riede, Wolfgang

    2015-01-01

    In order to avoid collisions with space debris, the near Earth orbit must be continuously scanned by either ground- or spaced-based facilities. For the low Earth orbit, radar telescopes are the workhorse for this task, especially due to their continuous availability. However, optical observation methods can deliver complementary information, especially towards high accuracy measurements. Passive-optical observations are inexpensive and can yield very precise information about the apparent position of the object in the sky via comparison with background stars. However, the object's distance from the observer is not readily accessible, which constitutes a major drawback of this approach for the precise calculation of the orbital elements. Two experimental methods have been devised to overcome this problem: Using two observatories a few kilometres apart, strictly simultaneous observations of the same object yield an accurate, instantaneous 3D position determination through measurement of the parallax. If only on...

  20. Advanced Optical Technologies for Defense Trauma and Critical Care

    Science.gov (United States)

    2014-02-04

    and human tracheas, with visualization around the entire circumference of the airway, and high resolution visualization of subsurface tissue layers...lumen of excised pig and human tracheas, with visualization around the entire circumference of the airway, and high resolution visualization of...Optical Coherence Tomography in the Rabbit,” JAMA Otolaryngol. Head Neck Surg. 139, 503-8 (2013). 16. Liu, G., W. Jia, V. Sun, B. Choi and Z. Chen

  1. Ultrafast Optics: Vector Cavity Laser - Physics and Technology

    Science.gov (United States)

    2016-06-14

    fiber lasers the effective cavity gain bandwidth could be far broader than the laser emission bandwidth, if the optical field is in resonance with the...periodic modulation on the CW laser field , where fc is the modulation frequency. Fig. 2.1 shows the evolution of the laser emission under existence of...real saturable absorber (SA) mode locking techniques, such as the carbon nanotube mode locking, 2D-nano-materials mode locking, formation of bound

  2. Ultrafast Optics: Vector Cavity Fiber Lasers - Physics and Technology

    Science.gov (United States)

    2016-06-14

    fiber lasers the effective cavity gain bandwidth could be far broader than the laser emission bandwidth, if the optical field is in resonance with the...periodic modulation on the CW laser field , where fc is the modulation frequency. Fig. 2.1 shows the evolution of the laser emission under existence of...real saturable absorber (SA) mode locking techniques, such as the carbon nanotube mode locking, 2D-nano-materials mode locking, formation of bound

  3. Ultrafast Optics - Vector Cavity Lasers: Physics and Technology

    Science.gov (United States)

    2016-06-14

    fiber lasers the effective cavity gain bandwidth could be far broader than the laser emission bandwidth, if the optical field is in resonance with the...periodic modulation on the CW laser field , where fc is the modulation frequency. Fig. 2.1 shows the evolution of the laser emission under existence of...real saturable absorber (SA) mode locking techniques, such as the carbon nanotube mode locking, 2D-nano-materials mode locking, formation of bound

  4. Advanced optical 3D scanners using DMD technology

    Science.gov (United States)

    Muenstermann, P.; Godding, R.; Hermstein, M.

    2017-02-01

    Optical 3D measurement techniques are state-of-the-art for highly precise, non-contact surface scanners - not only in industrial development, but also in near-production and even in-line configurations. The need for automated systems with very high accuracy and clear implementation of national precision standards is growing extremely due to expanding international quality guidelines, increasing production transparency and new concepts related to the demands of the fourth industrial revolution. The presentation gives an overview about the present technical concepts for optical 3D scanners and their benefit for customers and various different applications - not only in quality control, but also in design centers or in medical applications. The advantages of DMD-based systems will be discussed and compared to other approaches. Looking at today's 3D scanner market, there is a confusing amount of solutions varying from lowprice solutions to high end systems. Many of them are linked to a very special target group or to special applications. The article will clarify the differences of the approaches and will discuss some key features which are necessary to render optical measurement systems suitable for industrial environments. The paper will be completed by examples for DMDbased systems, e. g. RGB true-color systems with very high accuracy like the StereoScan neo of AICON 3D Systems. Typical applications and the benefits for customers using such systems are described.

  5. Laser Ablation as Enabling Technology for the Structuring of Optical Multilayer Structures

    Energy Technology Data Exchange (ETDEWEB)

    Hendrickx, N; Steenberge, G Van; Geerinck, P; Daele, P Van [TFCG Microsystems, Department of Information Technology, Ghent University, Technologiepark Zwijnaarde, Building 914A, B-9052 Ghent (Belgium)

    2007-04-15

    In this paper, laser ablation is presented as a versatile technology that can be used for the fabrication of all building blocks and functional elements required for an optical interconnection, integrated in printed circuit boards (PCBs). The integration of optical interconnections in PCBs is an emerging field in which interest worldwide is rapidly growing. The limiting factor is mainly the compatibility of new technologies, used to define and fabricate the optical interconnections, with standard FR4-processing steps, temperatures and lamination pressures. Laser ablation, which is currently frequently used for the drilling of electrical micro-vias in PCBs, has proven to be fully compatible with standard PCB manufacturing. An optical two layer structure is studied that can make full use of the functionalities of 2D elements such as VCSEL or photodiode arrays.

  6. Digital Diffractive Optics: An Introduction to Planar Diffractive Optics and Related Technology

    Science.gov (United States)

    Kress, B.; Meyrueis, P.

    2000-10-01

    Diffractive optical elements (DOEs) are becoming more and more widely used in a braod range of fields, including telecommunications, optical computing, consumer electronics, laser material processing and the biomedical sciences, to manipulate light through micro-optical systems. In order to get the most out of such DOEs, knowledge of the design process, fabrication, packaging in a particular system, and operation is required. Digital Diffractive Optics discusses in detail the design and simulation of DOEs, before considering the main fabrication techniques. The increasingly important CAD/CAM tool requirements for the production of DOEs are covered, and a chapter is devoted to the crucial area of systematic fabrication error compensation. Finally, the integration and use of DOEs in a number of different systems, including various opto-electronic and opto-mechanical systems, are discussed. Digital Diffractive Optics will be of great interest to all those involved in the fields of optical engineering and photonics. It presents a clear view of the whole process, from design to fabrication and application, without overstressing the, often complex, mathematics, and will thus be accessible to postgraduate students and those entering the field, as well as more experienced engineers and scientists.

  7. Strategic planning of developing automatic optical inspection (AOI) technologies in Taiwan

    Science.gov (United States)

    Fan, K. C.; Hsu, C.

    2005-01-01

    In most domestic hi-tech industries in Taiwan, the automatic optical inspection (AOI) equipment is mostly imported. In view of the required specifications, AOI consists of the integration of mechanical-electrical-optical-information technologies. In the past two decades, traditional industries have lost their competitiveness due to the low profit rate. It is possible to promote a new AOI industry in Taiwan through the integration of its strong background in mechatronic technology in positioning stages with the optical image processing techniques. The market requirements are huge not only in domestic need but also in global need. This is the main reason to promote the AOI research for the coming years in Taiwan. Focused industrial applications will be in IC, PCB, LCD, communication, and MEMS parts. This paper will analyze the domestic and global AOI equipment market, summarize the necessary fish bone technology diagrams, survey the actual industrial needs, and propose the strategic plan to be promoted in Taiwan.

  8. Research of Digital Manufacturing Technology Application on Ultra-precision Optical Workpiece Machining

    Institute of Scientific and Technical Information of China (English)

    HE Daxing

    2006-01-01

    Digital manufacturing technology can be used in optical field to solve many problems caused by traditional machining. According to the characters of digital manufacturing and the practical applications of ultra-precision machining, the process of digital ultra-precision machining and its technical contents were presented in this paper. In the conclusions, it was stated that the digitalization of ultra-precision machining will be an economical and efficient way for the production of new sorts of optical workpieces.

  9. Second Approximation Model for Optical Head in Super High Density Storage Technology

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    The paper presents second approximation model for optical head in super high-density storage technology firstly and it is an important part for three grades approximate model of ultra-small-size quantum well corn-shaped laser and simulative calculations. It supplies the important and useful results for the NFOD optical head design with ultra thin active layer and ultra small spot laser.

  10. Foil-based optical technology platform for optochemical sensors

    NARCIS (Netherlands)

    Kalathimekkad, S.; Missinne, J.; Arias Espinoza, J.D.; Hoe, B. van; Bosman, E.; Smits, E.; Mandamparambil, R.; Steenberge, G. van; Vanfleteren, J.

    2012-01-01

    This paper describes the development of a low-cost technology platform for fluorescence-based optochemical sensors. These sensors were constructed by incorporating fluorescent sensing elements in the core of multimode waveguides or lightguides, and have applications in medical, biochemical and envir

  11. Establishing research strategies, methodologies and technologies to link genomics and proteomics to seagrass productivity, community metabolism and ecosystem carbon fluxes

    Directory of Open Access Journals (Sweden)

    Silvia eMazzuca

    2013-03-01

    Full Text Available A complete understanding of the mechanistic basis of marine ecosystem functioning is only possible through integrative and interdisciplinary research. This enables the prediction of change and possibly the mitigation of the consequences of anthropogenic impacts. One major aim of the COST Action ES0609 Seagrasses productivity. From genes to ecosystem management, is the calibration and synthesis of various methods and the development of innovative techniques and protocols for studying seagrass ecosystems.During ten days, twenty researchers representing a range of disciplines (molecular biology, physiology, botany, ecology, oceanography, underwater acoustics gathered at the marine station of STARESO (Corsica to study together the nearby Posidonia oceanica meadow. The Station de Recherches Sous-marine et Océanographiques (STARESO is located in an oligotrophic area classified as "pristine site" where environmental disturbances caused by anthropogenic pressure are exceptionally low. The healthy P. oceanica meadow, that grows in front of the lab, colonizes the sea bottom from the surface to 37 m depth. During the study, genomic and proteomic approaches were integrated with ecophysiological and physical approaches with the aim of understanding changes in seagrass productivity and metabolism at different depths and along daily cycles. In this paper we report details on the approaches utilized and we forecast the potential of the data that will come from this synergistic approach not only for P. oceanica but for seagrasses in general.

  12. Optical screening of oral cancer: technology for emerging markets.

    Science.gov (United States)

    Naik, Sarif Kumar; Gupta, Lalit; Mittal, Chetan; Balakrishnan, Srinivasan; Rath, Satish Prasad; Santhosh, C; Pai, Keerthilatha M

    2007-01-01

    Oral cancer is the sixth most common cancer in the world. It is one of the most prevalent cancers in the developing countries of South Asia accounting for one third of the world burden. Sixty percent of the cancers are advanced by the time they are detected. Two methods of optical spectroscopy for detection of oral cancer have been discussed here. These methods are simple, easy to handle and non-invasive. The evaluation of the data is done automatically using pattern recognition techniques, making the screening subjective.

  13. Single-mode glass waveguide technology for optical interchip communication on board level

    Science.gov (United States)

    Brusberg, Lars; Neitz, Marcel; Schröder, Henning

    2012-01-01

    The large bandwidth demand in long-distance telecom networks lead to single-mode fiber interconnects as result of low dispersion, low loss and dense wavelength multiplexing possibilities. In contrast, multi-mode interconnects are suitable for much shorter lengths up to 300 meters and are promising for optical links between racks and on board level. Active optical cables based on multi-mode fiber links are at the market and research in multi-mode waveguide integration on board level is still going on. Compared to multi-mode, a single-mode waveguide has much more integration potential because of core diameters of around 20% of a multi-mode waveguide by a much larger bandwidth. But light coupling in single-mode waveguides is much more challenging because of lower coupling tolerances. Together with the silicon photonics technology, a single-mode waveguide technology on board-level will be the straight forward development goal for chip-to-chip optical interconnects integration. Such a hybrid packaging platform providing 3D optical single-mode links bridges the gap between novel photonic integrated circuits and the glass fiber based long-distance telecom networks. Following we introduce our 3D photonic packaging approach based on thin glass substrates with planar integrated optical single-mode waveguides for fiber-to-chip and chip-to-chip interconnects. This novel packaging approach merges micro-system packaging and glass integrated optics. It consists of a thin glass substrate with planar integrated singlemode waveguide circuits, optical mirrors and lenses providing an integration platform for photonic IC assembly and optical fiber interconnect. Thin glass is commercially available in panel and wafer formats and characterizes excellent optical and high-frequency properties. That makes it perfect for microsystem packaging. The paper presents recent results in single-mode waveguide technology on wafer level and waveguide characterization. Furthermore the integration in a

  14. Optical technologies for extreme-ultraviolet and soft X-ray coherent sources

    Energy Technology Data Exchange (ETDEWEB)

    Canova, Federico [Amplitude Technologies, Evry (France); Poletto, Luca (ed.) [National Research Council, Padova (Italy). Inst. of Photonics and Nanotechnology

    2015-07-01

    The book reviews the most recent achievements in optical technologies for XUV and X-ray coherent sources. Particular attention is given to free-electron-laser facilities, but also to other sources available at present, such as synchrotrons, high-order laser harmonics and X-ray lasers. The optical technologies relevant to each type of source are discussed. In addition, the main technologies used for photon handling and conditioning, namely multilayer mirrors, adaptive optics, crystals and gratings are explained. Experiments using coherent light received during the last decades a lot of attention for the X-ray regime. Strong efforts were taken for the realization of almost fully coherent sources, e.g. the free-electron lasers, both as independent sources in the femtosecond and attosecond regimes and as seeding sources for free-electron-lasers and X-ray gas lasers. In parallel to the development of sources, optical technologies for photon handling and conditioning of such coherent and intense X-ray beams advanced. New problems were faced for the realization of optical components of beamlines demanding to manage coherent X-ray photons, e.g. the preservation of coherence and time structure of ultra short pulses.

  15. Wide field of view adaptive optical system for lightweight deployable telescope technologies

    Science.gov (United States)

    McComas, Brian K.; Cermak, Michael A.; Friedman, Edward J.

    2003-02-01

    A NASA research contract (NAS1-00116) was awarded to Ball Aerospace & Technologies Corp. in January 2000 to study wide field-of-view adaptive optical systems. These systems will be required on future high resolution Earth remote sensing systems that employ large, flexible, lightweight, deployed primary mirrors. The deformations from these primary mirrors will introduce aberrations into the optical system, which must be removed by corrective optics. For economic reasons, these remote sensing systems must have a large field-of-view (a few degrees). Unlike ground-based adaptive optical systems, which have a negligible field-of-view, the adaptive optics on these space-based remote sensing systems will be required to correct for the deformations in the primary mirror over the entire field-of-view. A new error function, which is an enhancement to conventional adaptive optics, for wide field-of-view optical systems will be introduced. This paper will present the goals of the NASA research project and its progress. The initial phase of this research project is a demonstration of the wide field-of-view adaptive optics theory. A breadboard has been designed and built for this purpose. The design and assembly of the breadboard will be presented, along with the final results for this phase of the research project. Finally, this paper will show the applicability of wide field-of-view adaptive optics to space-based astronomical systems.

  16. Evaluation of emerging parallel optical link technology for high energy physics

    Science.gov (United States)

    Chramowicz, J.; Kwan, S.; Prosser, A.; Winchell, M.

    2012-01-01

    Modern particle detectors utilize optical fiber links to deliver event data to upstream trigger and data processing systems. Future detector systems can benefit from the development of dense arrangements of high speed optical links emerging from industry advancements in transceiver technology. Supporting data transfers of up to 120 Gbps in each direction, optical engines permit assembly of the optical transceivers in close proximity to ASICs and FPGAs. Test results of some of these parallel components will be presented including the development of pluggable FPGA Mezzanine Cards equipped with optical engines to provide to collaborators on the Versatile Link Common Project for the HI-LHC at CERN. This work was supported by the U.S. Department of Energy, operated by Fermi Research Alliance, LLC under contract No. DE-AC02-07CH11359 with the United States Department of Energy.

  17. Structural health monitoring of civil infrastructure using optical fiber sensing technology: a comprehensive review.

    Science.gov (United States)

    Ye, X W; Su, Y H; Han, J P

    2014-01-01

    In the last two decades, a significant number of innovative sensing systems based on optical fiber sensors have been exploited in the engineering community due to their inherent distinctive advantages such as small size, light weight, immunity to electromagnetic interference (EMI) and corrosion, and embedding capability. A lot of optical fiber sensor-based monitoring systems have been developed for continuous measurement and real-time assessment of diversified engineering structures such as bridges, buildings, tunnels, pipelines, wind turbines, railway infrastructure, and geotechnical structures. The purpose of this review article is devoted to presenting a summary of the basic principles of various optical fiber sensors, innovation in sensing and computational methodologies, development of novel optical fiber sensors, and the practical application status of the optical fiber sensing technology in structural health monitoring (SHM) of civil infrastructure.

  18. Medical smart textiles based on fiber optic technology: an overview.

    Science.gov (United States)

    Massaroni, Carlo; Saccomandi, Paola; Schena, Emiliano

    2015-04-13

    The growing interest in the development of smart textiles for medical applications is driven by the aim to increase the mobility of patients who need a continuous monitoring of such physiological parameters. At the same time, the use of fiber optic sensors (FOSs) is gaining large acceptance as an alternative to traditional electrical and mechanical sensors for the monitoring of thermal and mechanical parameters. The potential impact of FOSs is related to their good metrological properties, their small size and their flexibility, as well as to their immunity from electromagnetic field. Their main advantage is the possibility to use textile based on fiber optic in a magnetic resonance imaging environment, where standard electronic sensors cannot be employed. This last feature makes FOSs suitable for monitoring biological parameters (e.g., respiratory and heartbeat monitoring) during magnetic resonance procedures. Research interest in combining FOSs and textiles into a single structure to develop wearable sensors is rapidly growing. In this review we provide an overview of the state-of-the-art of textiles, which use FOSs for monitoring of mechanical parameters of physiological interest. In particular we briefly describe the working principle of FOSs employed in this field and their relevant advantages and disadvantages. Also reviewed are their applications for the monitoring of mechanical parameters of physiological interest.

  19. Medical Smart Textiles Based on Fiber Optic Technology: An Overview

    Directory of Open Access Journals (Sweden)

    Carlo Massaroni

    2015-04-01

    Full Text Available The growing interest in the development of smart textiles for medical applications is driven by the aim to increase the mobility of patients who need a continuous monitoring of such physiological parameters. At the same time, the use of fiber optic sensors (FOSs is gaining large acceptance as an alternative to traditional electrical and mechanical sensors for the monitoring of thermal and mechanical parameters. The potential impact of FOSs is related to their good metrological properties, their small size and their flexibility, as well as to their immunity from electromagnetic field. Their main advantage is the possibility to use textile based on fiber optic in a magnetic resonance imaging environment, where standard electronic sensors cannot be employed. This last feature makes FOSs suitable for monitoring biological parameters (e.g., respiratory and heartbeat monitoring during magnetic resonance procedures. Research interest in combining FOSs and textiles into a single structure to develop wearable sensors is rapidly growing. In this review we provide an overview of the state-of-the-art of textiles, which use FOSs for monitoring of mechanical parameters of physiological interest. In particular we briefly describe the working principle of FOSs employed in this field and their relevant advantages and disadvantages. Also reviewed are their applications for the monitoring of mechanical parameters of physiological interest.

  20. Application research on hydraulic coke cutting monitoring system based on optical fiber sensing technology

    Science.gov (United States)

    Zhong, Dong; Tong, Xinglin

    2014-06-01

    With the development of the optical fiber sensing technology, the acoustic emission sensor has become one of the focal research topics. On the basis of studying the traditional hydraulic coke cutting monitoring system, the optical fiber acoustic emission sensor has been applied in the hydraulic coke cutting monitoring system for the first time, researching the monitoring signal of the optical fiber acoustic emission sensor in the system. The actual test results show that using the acoustic emission sensor in the hydraulic coke cutting monitoring system can get the real-time and accurate hydraulic coke cutting state and the effective realization of hydraulic coke cutting automatic monitoring in the Wuhan Branch of Sinopec.

  1. Design of a Multicast Optical Packet Switch Based on Fiber Bragg Grating Technology for Future Networks

    Science.gov (United States)

    Cheng, Yuh-Jiuh; Yeh, Tzuoh-Chyau; Cheng, Shyr-Yuan

    2011-09-01

    In this paper, a non-blocking multicast optical packet switch based on fiber Bragg grating technology with optical output buffers is proposed. Only the header of optical packets is converted to electronic signals to control the fiber Bragg grating array of input ports and the packet payloads should be transparently destined to their output ports so that the proposed switch can reduce electronic interfaces as well as the bit rate. The modulation and the format of packet payloads may be non-standard where packet payloads could also include different wavelengths for increasing the volume of traffic. The advantage is obvious: the proposed switch could transport various types of traffic. An easily implemented architecture which can provide multicast services is also presented. An optical output buffer is designed to queue the packets if more than one incoming packet should reach to the same destination output port or including any waiting packets in optical output buffer that will be sent to the output port at a time slot. For preserving service-packet sequencing and fairness of routing sequence, a priority scheme and a round-robin algorithm are adopted at the optical output buffer. The fiber Bragg grating arrays for both input ports and output ports are designed for routing incoming packets using optical code division multiple access technology.

  2. Proteomic analysis.

    Science.gov (United States)

    Cosette, Pascal; Jouenne, Thierry

    2014-01-01

    Proteome provides highly valuable information on the amount, modifications, and subcellular localization of polypeptides. Accordingly, geneticists, molecular biologists, and biochemists have logically applied these new tools to respond to different lines of biological questions (inventory of proteins, impact of a mutation, dynamics of protein regulation under a given exposure, …). However, even if the results obtained are very informative, this approach needs an excellent experimental design which ensures robustness and thus yields reproducibility. The present chapter gives appropriate methods for assessing the proteome of Pseudomonas aeruginosa by using a two-dimensional gel electrophoresis approach. Protocols for crude protein extraction, protein separation by using immobilized pH gradients, and protein identification by Liquid Chromatography coupled with tandem Mass Spectrometry (LC-MS/MS) are given.

  3. Biodeterioration of optical glass induced by lubricants used in optical instruments technology.

    Science.gov (United States)

    Bartosik, Magdalena; Zakowska, Zofia; Cedzińska, Krystyna; Rozniakowski, Kazimierz

    2010-01-01

    The process of biodeterioration of optical glass was studied after being induced by an auxiliary material (lubricant 4CKP) used in the production of optical instruments. It was determined that the lubricant can initiate growth of conidia of Aspergillus niger fungus. Acid spawn metabolites cause deterioration of the glass surface. Measurements of laser light beam transmittance through the glass plate and the AAS chemical analysis method of the post-culture fluid allowed to determine that glass with a high SiO2 content is most resistant to corrosion caused by the growth of A. niger fungi spawn.

  4. Update on the SKA Offset Optics Design for the U.S. Technology Development Project

    Science.gov (United States)

    Imbriale, William A.; Cortes-Medellin, German; Baker, Lynn

    2011-01-01

    The U.S. design concept for the Square Kilometre Array (SKA) program is based on utilizing a large number of small-diameter dish antennas in the 12 to 15 meter diameter range. The Technology Development Project (TDP) is planning to design and build the first of these antennas to provide a demonstration of the technology and a solid base on which to estimate costs. The latest considerations for selecting both the optics and feed design are presented.

  5. Mass Spectrometry Instrumentation in Proteomics

    DEFF Research Database (Denmark)

    Sprenger, Richard Remko; Roepstorff, Peter

    2012-01-01

    Mass spectrometry has evolved into a crucial technology for the field of proteomics, enabling the comprehensive study of proteins in biological systems. Innovative developments have yielded flexible and versatile mass spectrometric tools, including quadrupole time-of-flight, linear ion trap...

  6. Enabling Technologies for Direct Detection Optical Phase Modulation Formats

    Science.gov (United States)

    Xu, Xian

    Phase modulation formats are believed to be one of the key enabling techniques for next generation high speed long haul fiber-optic communication systems due to the following main advantages: (1) with a balanced detection, a better receiver sensitivity over conventional intensity modulation formats, e.g., a ˜3-dB sensitivity improvement using differential phase shift keying (DPSK) and a ˜1.3-dB sensitivity improvement using differential quadrature phase shift keying (DQPSK); (2) excellent robustness against fiber nonlinearities; (3) high spectrum efficiency when using multilevel phase modulation formats, such as DQPSK. As the information is encoded in the phase of the optical field, the phase modulation formats are sensitive to the phase-related impairments and the deterioration induced in the phase-intensity conversion. This consequently creates new challenging issues. The research objective of this thesis is to depict some of the challenging issues and provide possible solutions. The first challenge is the cross-phase modulation (XPM) penalty for the phase modulated channels co-propagating with the intensity modulated channels. The penalty comes from the pattern dependent intensity fluctuations of the neighboring intensity modulated channels being converted into phase noise in the phase modulation channels. We propose a model to theoretically analyze the XPM penalty dependence on the walk off effect. From this model, we suggest that using fibers with large local dispersion or intentionally introducing some residual dispersion per span would help mitigate the XPM penalty. The second challenge is the polarization dependent frequency shift (PDf) induced penalty during the phase-intensity conversion. The direct detection DPSK is usually demodulated in a Mach-Zehnder delay interferometer (DI). The polarization dependence of DI introduces a PDf causing a frequency offset between the laser's frequency and the transmissivity peak of DI, degrading the demodulated DPSK

  7. Optical technologies for extreme-ultraviolet and soft X-ray coherent sources

    CERN Document Server

    Poletto, Luca

    2015-01-01

    The book reviews the most recent achievements in optical technologies for XUV and X-ray coherent sources. Particular attention is given to free-electron-laser facilities, but also to other sources available at present, such as synchrotrons, high-order laser harmonics and X-ray lasers. The optical technologies relevant to each type of source are discussed. In addition, the main technologies used for photon handling and conditioning, namely multilayer mirrors, adaptive optics, crystals and gratings are explained. Experiments using coherent light received during the last decades a lot of attention for the X-ray regime. Strong efforts were taken for the realization of almost fully coherent sources, e.g. the free-electron lasers, both as independent sources in the femtosecond and attosecond regimes and as seeding sources for free-electron-lasers and X-ray gas lasers. In parallel to the development of sources, optical technologies for photon handling and conditioning of such coherent and intense X-ray beams advance...

  8. Minimally invasive non-thermal laser technology using laser-induced optical breakdown for skin rejuvenation

    NARCIS (Netherlands)

    Habbema, L.; Verhagen, R.; Van Hal, R.; Liu, Y.; Varghese, B.

    2011-01-01

    We describe a novel, minimally invasive laser technology for skin rejuvenation by creating isolated microscopic lesions within tissue below the epidermis using laser induced optical breakdown. Using an in-house built prototype device, tightly focused near-infrared laser pulses are used to create opt

  9. Minimally invasive non-thermal laser technology using laser-induced optical breakdown for skin rejuvenation

    NARCIS (Netherlands)

    Habbema, L.; Verhagen, R.; Van Hal, R.; Liu, Y.; Varghese, B.

    2011-01-01

    We describe a novel, minimally invasive laser technology for skin rejuvenation by creating isolated microscopic lesions within tissue below the epidermis using laser induced optical breakdown. Using an in-house built prototype device, tightly focused near-infrared laser pulses are used to create

  10. Advanced Fiber Optic-Based Sensing Technology for Unmanned Aircraft Systems

    Science.gov (United States)

    Richards, Lance; Parker, Allen R.; Piazza, Anthony; Ko, William L.; Chan, Patrick; Bakalyar, John

    2011-01-01

    This presentation provides an overview of fiber optic sensing technology development activities performed at NASA Dryden in support of Unmanned Aircraft Systems. Examples of current and previous work are presented in the following categories: algorithm development, system development, instrumentation installation, ground R&D, and flight testing. Examples of current research and development activities are provided.

  11. Potentiality of optical diffraction grating technology in the fabrication of miniaturized multicapillary chromatographic and electrophoresis columns.

    Science.gov (United States)

    Samsonov, Y N

    2001-10-01

    A possible way of fabricating miniaturized multicapillary columns for gas and liquid chromatographs or electrophoresis devices containing many thousands of identical channels with a width (or depth) of approximately 1-30 microm by means of industrial technology for the production of optical plane reflecting diffraction gratings is proposed.

  12. Optical Measurement System for Motion Characterization of Surface Mount Technology

    Institute of Scientific and Technical Information of China (English)

    LI Song; AN Bing; ZHANG Tong-jun; XIE Yong-jun

    2006-01-01

    Advanced testing methods for the dynamics of mechanical microdevices are necessary to develop reliable,marketable microelectromechanical systems. A system for measuring the nanometer motions of microscopic structures has been demonstrated. Stop-action images of a target have been obtained with computer microvision,microscopic interferometry,and stroboscopic illuminator. It can be developed for measuring the in-plane-rigid-body motions,surface shapes,out-of-plane motions and deformations of microstructures. A new algorithm of sub-pixel step length correlation template matching is proposed to extract the in-plane displacement from vision images. Hariharan five-step phase-shift interferometry algorithm and unwrapping algorithms are adopted to measure the out-of-plane motions. It is demonstrated that the system can measure the motions of solder wetting in surface mount technology(SMT).

  13. Utility, limitations, and promise of proteomics in animal science.

    Science.gov (United States)

    Lippolis, John D; Reinhardt, Timothy A

    2010-12-15

    Proteomics experiments have the ability to simultaneously identify and quantify thousands of proteins in one experiment. The use of this technology in veterinary/animal science is still in its infancy, yet it holds significant promise as a method for advancing veterinary/animal science research. Examples of current experimental designs and capabilities of proteomic technology and basic principles of mass spectrometry are discussed. In addition, challenges and limitations of proteomics are presented, stressing those that are unique to veterinary/animal sciences.

  14. Optical Material Researches for Frontier Optical Ceramics and Visible Fiber Laser Technologies

    Science.gov (United States)

    2016-07-07

    AM2A.2, 27 October - 01 November 2013, Paris Marriott Rive Gauche Hotel and Convention Center, Paris, France. 2) “ Development on advanced functional...DISTRIBUTION/AVAILABILITY STATEMENT A DISTRIBUTION UNLIMITED: PB Public Release 13. SUPPLEMENTARY NOTES 14. ABSTRACT We have successfully developed a new...are very useful for scientific and industrial applications. 15. SUBJECT TERMS Fibre Lasers, Laser Dynamics, Nonlinear Optical Materials 16. SECURITY

  15. Logical optical line terminal technologies towards flexible and highly reliable metro- and access-integrated networks

    Science.gov (United States)

    Okamoto, Satoru; Sato, Takehiro; Yamanaka, Naoaki

    2017-01-01

    In this paper, flexible and highly reliable metro and access integrated networks with network virtualization and software defined networking technologies will be presented. Logical optical line terminal (L-OLT) technologies and active optical distribution networks (ODNs) are the key to introduce flexibility and high reliability into the metro and access integrated networks. In the Elastic Lambda Aggregation Network (EλAN) project which was started in 2012, a concept of the programmable optical line terminal (P-OLT) has been proposed. A role of the P-OLT is providing multiple network services that have different protocols and quality of service requirements by single OLT box. Accommodated services will be Internet access, mobile front-haul/back-haul, data-center access, and leased line. L-OLTs are configured within the P-OLT box to support the functions required for each network service. Multiple P-OLTs and programmable optical network units (P-ONUs) are connected by the active ODN. Optical access paths which have flexible capacity are set on the ODN to provide network services from L-OLT to logical ONUs (L-ONUs). The L-OLT to L-ONU path on the active ODN provides a logical connection. Therefore, introducing virtualization technologies becomes possible. One example is moving an L-OLT from one P-OLT to another P-OLT like a virtual machine. This movement is called L-OLT migration. The L-OLT migration provides flexible and reliable network functions such as energy saving by aggregating L-OLTs to a limited number of P-OLTs, and network wide optical access path restoration. Other L-OLT virtualization technologies and experimental results will be also discussed in the paper.

  16. Characterization of anti-Salmonella enterica serotype Typhi antibody responses in bacteremic Bangladeshi patients by an immunoaffinity proteomics-based technology.

    Science.gov (United States)

    Charles, Richelle C; Sheikh, Alaullah; Krastins, Bryan; Harris, Jason B; Bhuiyan, M Saruar; LaRocque, Regina C; Logvinenko, Tanya; Sarracino, David A; Kudva, Indira T; Eisenstein, Jana; Podolsky, Michael J; Kalsy, Anuj; Brooks, W Abdullah; Ludwig, Albrecht; John, Manohar; Calderwood, Stephen B; Qadri, Firdausi; Ryan, Edward T

    2010-08-01

    Salmonella enterica serotype Typhi is the cause of typhoid fever and a human-restricted pathogen. Currently available typhoid vaccines provide 50 to 90% protection for 2 to 5 years, and available practical diagnostic assays to identify individuals with typhoid fever lack sensitivity and/or specificity. Identifying immunogenic S. Typhi antigens expressed during human infection could lead to improved diagnostic assays and vaccines. Here we describe a platform immunoaffinity proteomics-based technology (IPT) that involves the use of columns charged with IgG, IgM, or IgA antibody fractions recovered from humans bacteremic with S. Typhi to capture S. Typhi proteins that were subsequently identified by mass spectrometry. This screening tool identifies immunogenic proteins recognized by antibodies from infected hosts. Using this technology and the plasma of patients with S. Typhi bacteremia in Bangladesh, we identified 57 proteins of S. Typhi, including proteins known to be immunogenic (PagC, HlyE, OmpA, and GroEL) and a number of proteins present in the human-restricted serotypes S. Typhi and S. Paratyphi A but rarely found in broader-host-range Salmonella spp. (HlyE, CdtB, PltA, and STY1364). We categorized identified proteins into a number of major groupings, including those involved in energy metabolism, protein synthesis, iron homeostasis, and biosynthetic and metabolic functions and those predicted to localize to the outer membrane. We assessed systemic and mucosal anti-HlyE responses in S. Typhi-infected patients and detected anti-HlyE responses at the time of clinical presentation in patients but not in controls. These findings could assist in the development of improved diagnostic assays.

  17. Implantable optogenetic device with CMOS IC technology for simultaneous optical measurement and stimulation

    Science.gov (United States)

    Haruta, Makito; Kamiyama, Naoya; Nakajima, Shun; Motoyama, Mayumi; Kawahara, Mamiko; Ohta, Yasumi; Yamasaki, Atsushi; Takehara, Hiroaki; Noda, Toshihiko; Sasagawa, Kiyotaka; Ishikawa, Yasuyuki; Tokuda, Takashi; Hashimoto, Hitoshi; Ohta, Jun

    2017-05-01

    In this study, we have developed an implantable optogenetic device that can measure and stimulate neurons by an optical method based on CMOS IC technology. The device consist of a blue LED array for optically patterned stimulation, a CMOS image sensor for acquiring brain surface image, and eight green LEDs surrounding the CMOS image sensor for illumination. The blue LED array is placed on the CMOS image sensor. We implanted the device in the brain of a genetically modified mouse and successfully demonstrated the stimulation of neurons optically and simultaneously acquire intrinsic optical images of the brain surface using the image sensor. The integrated device can be used for simultaneously measuring and controlling neuronal activities in a living animal, which is important for the artificial control of brain functions.

  18. OPTICAL FIBER SENSOR TECHNOLOGIES FOR EFFICIENT AND ECONOMICAL OIL RECOVERY

    Energy Technology Data Exchange (ETDEWEB)

    A. Wang; H. Xiao; R. May

    1999-10-29

    Efficient and complete recovery of petroleum reserves from existing oil wells has proven difficult due to a lack of robust instrumentation that can monitor processes in the downhole environment. Commercially available sensors for measurement of pressure, temperature, and fluid flow exhibit shortened lifetimes in the harsh downhole conditions, which are characterized by high pressures (up to 20 kpsi), temperatures up to 250 C, and exposure to chemically reactive fluids. Development of robust sensors that deliver continuous, real-time data on reservoir performance and petroleum flow pathways will facilitate application of advanced recovery technologies, including horizontal and multi-lateral wells. The main objective of the research program is to develop cost-effective, reliable fiber sensor instrumentation for real-time monitoring and /or control of various key parameters crucial to efficient and economical oil production. This report presents the detailed research work and technical progress from October 1, 1998 to September 30, 1999. The research performed over the first year of the program has followed the schedule as proposed, and solid research progress has been made in specification of the technical requirements, design and fabrication of the SCIIB sensor probes, development of the sensor systems, development of DSP-based signal processing techniques, and construction of the test systems. These technical achievements will significantly help to advance continued research on sensor tests and evaluation during the second year of the program.

  19. Quantum plasmonics for next-generation optical and sensing technologies

    Science.gov (United States)

    Moaied, Modjtaba; Ostrikov, Kostya (Ken)

    2015-12-01

    Classical plasmonics has mostly focused on structures characterized by large dimension, for which the quantummechanical effects have nearly no impact. However, recent advances in technology, especially on miniaturized plasmonics devices at nanoscale, have made it possible to imagine experimental applications of plasmons where the quantum nature of free charge carriers play an important role. Therefore, it is necessary to use quantum mechanics to model the transport of charge carriers in solid state plasma nanostructures. Here, a non-local quantum model of permittivity is presented by applying the Wigner equation with collision term in the kinetic theory of solid state plasmas where the dominant electron scattering mechanism is the electron-lattice collisions. The surface plasmon resonance of ultra-small nanoparticles is investigated using this non-local quantum permittivity and its dispersion relation is obtained. The successful application of this theory in ultra-small plasmonics structures such as surface plasmon polariton waveguides, doped semiconductors, graphene, the metamaterials composed of alternating layers of metal and dielectric, and the quantum droplets is anticipated.

  20. Optically pumped VECSELs: review of technology and progress

    Science.gov (United States)

    Guina, M.; Rantamäki, A.; Härkönen, A.

    2017-09-01

    Vertical-external-cavity surface-emitting lasers (VECSELs) are the most versatile laser sources, combining unique features such as wide spectral coverage, ultrashort pulse operation, low noise properties, high output power, high brightness and compact form-factor. This paper reviews the recent technological developments of VECSELs in connection with the new milestones that continue to pave the way towards their use in numerous applications. Significant attention is devoted to the fabrication of VECSEL gain mirrors in challenging wavelength regions, especially at the yellow and red wavelengths. The reviewed fabrication approaches address wafer-bonded VECSEL structures as well as the use of hybrid mirror structures. Moreover, a comprehensive summary of VECSEL characterization methods is presented; the discussion covers different stages of VECSEL development and different operation regimes, pointing out specific characterization techniques for each of them. Finally, several emerging applications are discussed, with emphasis on the unique application objectives that VECSELs render possible, for example in atom and molecular physics, dermatology and spectroscopy.

  1. A Review on Radio-Over-Fiber Technology-Based Integrated (Optical/Wireless) Networks

    Science.gov (United States)

    Rajpal, Shivika; Goyal, Rakesh

    2017-03-01

    In the present paper, radio-over-fiber (RoF) technology has been proposed, which is the integration of the optical and radio networks. With a high transmission capacity, comparatively low cost and low attenuation, optical fiber provides an ideal solution for accomplishing the interconnections. In addition, a radio system enables the significant mobility, flexibility and easy access. Therefore, the system integration can meet the increasing demands of subscribers for voice, data and multimedia services that require the access network to support high data rates at any time and any place inexpensively. RoF has the potentiality to the backbone of the wireless access network and it has gained significant momentum in the last decade as a potential last-mile access scheme. This paper gives the comprehensive review of RoF technology used in the communication system. Concept, applications, advantages and limitations of RoF technology are also discussed in this paper.

  2. Proteomics characterization of exosome cargo.

    Science.gov (United States)

    Schey, Kevin L; Luther, J Matthew; Rose, Kristie L

    2015-10-01

    Characterization of exosomal cargo is of significant interest because this cargo can provide clues to exosome biogenesis, targeting, and cellular effects and may be a source of biomarkers for disease diagnosis, prognosis and response to treatment. With recent improvements in proteomics technologies, both qualitative and quantitative characterization of exosomal proteins is possible. Here we provide a brief review of exosome proteomics studies and provide detailed protocols for global qualitative, global quantitative, and targeted quantitative analysis of exosomal proteins. In addition, we provide an example application of a standard global quantitative analysis followed by validation via a targeted quantitative analysis of urine exosome samples from human patients. Advantages and limitations of each method are discussed as well as future directions for exosome proteomics analysis.

  3. Establishing research strategies, methodologies and technologies to link genomics and proteomics to seagrass productivity, community metabolism and ecosystem carbon fluxes

    OpenAIRE

    2013-01-01

    A complete understanding of the mechanistic basis of marine ecosystem functioning is only possible through integrative and interdisciplinary research.This enables the predictionof change and possibly the mitigation of the consequences ofanthropogenic impacts. One major aim of the European Cooperation in Science and Technology (COST) Action ES0609 “Seagrasses productivity. From genes to ecosystem management,” is the calibration and synthesis of various methods and the development o...

  4. Recent Developments in Optical Detection Technologies in Lab-on-a-Chip Devices for Biosensing Applications

    Directory of Open Access Journals (Sweden)

    Nuno Miguel Matos Pires

    2014-08-01

    Full Text Available The field of microfluidics has yet to develop practical devices that provide real clinical value. One of the main reasons for this is the difficulty in realizing low-cost, sensitive, reproducible, and portable analyte detection microfluidic systems. Previous research has addressed two main approaches for the detection technologies in lab-on-a-chip devices: (a study of the compatibility of conventional instrumentation with microfluidic structures, and (b integration of innovative sensors contained within the microfluidic system. Despite the recent advances in electrochemical and mechanical based sensors, their drawbacks pose important challenges to their application in disposable microfluidic devices. Instead, optical detection remains an attractive solution for lab-on-a-chip devices, because of the ubiquity of the optical methods in the laboratory. Besides, robust and cost-effective devices for use in the field can be realized by integrating proper optical detection technologies on chips. This review examines the recent developments in detection technologies applied to microfluidic biosensors, especially addressing several optical methods, including fluorescence, chemiluminescence, absorbance and surface plasmon resonance.

  5. Recent developments in optical detection technologies in lab-on-a-chip devices for biosensing applications.

    Science.gov (United States)

    Pires, Nuno Miguel Matos; Dong, Tao; Hanke, Ulrik; Hoivik, Nils

    2014-08-21

    The field of microfluidics has yet to develop practical devices that provide real clinical value. One of the main reasons for this is the difficulty in realizing low-cost, sensitive, reproducible, and portable analyte detection microfluidic systems. Previous research has addressed two main approaches for the detection technologies in lab-on-a-chip devices: (a) study of the compatibility of conventional instrumentation with microfluidic structures, and (b) integration of innovative sensors contained within the microfluidic system. Despite the recent advances in electrochemical and mechanical based sensors, their drawbacks pose important challenges to their application in disposable microfluidic devices. Instead, optical detection remains an attractive solution for lab-on-a-chip devices, because of the ubiquity of the optical methods in the laboratory. Besides, robust and cost-effective devices for use in the field can be realized by integrating proper optical detection technologies on chips. This review examines the recent developments in detection technologies applied to microfluidic biosensors, especially addressing several optical methods, including fluorescence, chemiluminescence, absorbance and surface plasmon resonance.

  6. JPRS Report, Science & Technology, Japan, Optical Communications, Optronic Devices Manufacturing Technology

    Science.gov (United States)

    1988-11-04

    Casting When processing the preform into optical fiber ( wire drawing ), it is necessary to soften it under the temperature of crystallization. Moreover...when the preform is subjected to wire drawing in air as is, crystallization very often occurs from the surface. As a result, the technique used is...to jacket it with a fluoride resin tube having roughly equal softening temperature to make a unified piece, which is then subjected to wire drawing . 4.3

  7. Assessment of fiber optic sensors and other advanced sensing technologies for nuclear power plants

    Energy Technology Data Exchange (ETDEWEB)

    Hashemian, H.M. [Analysis and Measurement Services Corporation, Knoxville, TN (United States)

    1996-03-01

    As a result of problems such as calibration drift in nuclear plant pressure sensors and the recent oil loss syndrome in some models of Rosemount pressure transmitters, the nuclear industry has become interested in fiber optic pressure sensors. Fiber optic sensing technologies have been considered for the development of advanced instrumentation and control (I&C) systems for the next generation of reactors and in older plants which are retrofitted with new I&C systems. This paper presents the results of a six-month Phase I study to establish the state-of-the-art in fiber optic pressure sensing. This study involved a literature review, contact with experts in the field, an industrial survey, a site visit to a fiber optic sensor manufacturer, and laboratory testing of a fiber optic pressure sensor. The laboratory work involved both static and dynamic performance tests. This initial Phase I study has recently been granted a two-year extension by the U.S. Nuclear Regulatory Commission (NRC). The next phase will evaluate fiber optic pressure sensors in specific nuclear plant applications in addition to other advanced methods for monitoring critical nuclear plant equipment.

  8. Proteomics in the genome engineering era.

    Science.gov (United States)

    Vandemoortele, Giel; Gevaert, Kris; Eyckerman, Sven

    2016-01-01

    Genome engineering experiments used to be lengthy, inefficient, and often expensive, preventing a widespread adoption of such experiments for the full assessment of endogenous protein functions. With the revolutionary clustered regularly interspaced short palindromic repeats/CRISPR-associated protein 9 technology, genome engineering became accessible to the broad life sciences community and is now implemented in several research areas. One particular field that can benefit significantly from this evolution is proteomics where a substantial impact on experimental design and general proteome biology can be expected. In this review, we describe the main applications of genome engineering in proteomics, including the use of engineered disease models and endogenous epitope tagging. In addition, we provide an overview on current literature and highlight important considerations when launching genome engineering technologies in proteomics workflows.

  9. 3D micro-optical lens scanner made by multi-wafer bonding technology

    Science.gov (United States)

    Bargiel, S.; Gorecki, C.; Barański, M.; Passilly, N.; Wiemer, M.; Jia, C.; Frömel, J.

    2013-03-01

    We present the preliminary design, construction and technology of a microoptical, millimeter-size 3-D microlens scanner, which is a key-component for a number of optical on-chip microscopes with emphasis on the architecture of confocal microscope. The construction of the device relies on the vertical integration of micromachined building blocks: top glass lid, silicon electrostatic comb-drive X-Y and Z microactuators with integrated scanning microlenses, ceramic LTCC spacer, and bottom lid with focusing microlens. All components are connected on the wafer level only by sequential anodic bonding. The technology of through wafer vias is applied to create electrical connections through a stack of wafers. More generally, the presented bonding/connection technologies are also of a great importance for the development of various silicon-based devices based on vertical integration scheme. This approach offers a space-effective integration of complex MOEMS devices and an effective integration of various heterogeneous technologies.

  10. Ethernet access network based on free-space optic deployment technology

    Science.gov (United States)

    Gebhart, Michael; Leitgeb, Erich; Birnbacher, Ulla; Schrotter, Peter

    2004-06-01

    The satisfaction of all communication needs from single households and business companies over a single access infrastructure is probably the most challenging topic in communications technology today. But even though the so-called "Last Mile Access Bottleneck" is well known since more than ten years and many distribution technologies have been tried out, the optimal solution has not yet been found and paying commercial access networks offering all service classes are still rare today. Conventional services like telephone, radio and TV, as well as new and emerging services like email, web browsing, online-gaming, video conferences, business data transfer or external data storage can all be transmitted over the well known and cost effective Ethernet networking protocol standard. Key requirements for the deployment technology driven by the different services are high data rates to the single customer, security, moderate deployment costs and good scalability to number and density of users, quick and flexible deployment without legal impediments and high availability, referring to the properties of optical and wireless communication. We demonstrate all elements of an Ethernet Access Network based on Free Space Optic distribution technology. Main physical parts are Central Office, Distribution Network and Customer Equipment. Transmission of different services, as well as configuration, service upgrades and remote control of the network are handled by networking features over one FSO connection. All parts of the network are proven, the latest commercially available technology. The set up is flexible and can be adapted to any more specific need if required.

  11. Fiber optic vibration sensor for high-power electric machines realized using 3D printing technology

    Science.gov (United States)

    Igrec, Bojan; Bosiljevac, Marko; Sipus, Zvonimir; Babic, Dubravko; Rudan, Smiljko

    2016-03-01

    The objective of this work was to demonstrate a lightweight and inexpensive fiber-optic vibration sensor, built using 3D printing technology, for high-power electric machines and similar applications. The working principle is based on modulating the light intensity using a blade attached to a bendable membrane. The sensor prototype was manufactured using PolyJet Matrix technology with DM 8515 Grey 35 Polymer. The sensor shows linear response, expected bandwidth (< 150 Hz), and from our measurements we estimated the damping ratio for used polymer to be ζ ≍ 0.019. The developed prototype is simple to assemble, adjust, calibrate and repair.

  12. Optics Design for the U.S. SKA Technology Development Project Design Verification Antenna

    Science.gov (United States)

    Imbriale, W. A.; Baker, L.; Cortes-Medellin, G.

    2012-01-01

    The U.S. design concept for the Square Kilometer Array (SKA) program is based on utilizing a large number of 15 meter dish antennas. The Technology Development Project (TDP) is planning to design and build the first of these antennas to provide a demonstration of the technology and a solid base on which to estimate costs. This paper describes the performance of the selected optics design. It is a dual-shaped offset Gregorian design with a feed indexer that can accommodate corrugated horns, wide band single pixel feeds or phased array feeds.

  13. Optics Design for the U.S. SKA Technology Development Project Design Verification Antenna

    Science.gov (United States)

    Imbriale, W. A.; Baker, L.; Cortes-Medellin, G.

    2012-01-01

    The U.S. design concept for the Square Kilometer Array (SKA) program is based on utilizing a large number of 15 meter dish antennas. The Technology Development Project (TDP) is planning to design and build the first of these antennas to provide a demonstration of the technology and a solid base on which to estimate costs. This paper describes the performance of the selected optics design. It is a dual-shaped offset Gregorian design with a feed indexer that can accommodate corrugated horns, wide band single pixel feeds or phased array feeds.

  14. The electronic image stabilization technology research based on improved optical-flow motion vector estimation

    Science.gov (United States)

    Wang, Chao; Ji, Ming; Zhang, Ying; Jiang, Wentao; Lu, Xiaoyan; Wang, Jiaoying; Yang, Heng

    2016-01-01

    The electronic image stabilization technology based on improved optical-flow motion vector estimation technique can effectively improve the non normal shift, such as jitter, rotation and so on. Firstly, the ORB features are extracted from the image, a set of regions are built on these features; Secondly, the optical-flow vector is computed in the feature regions, in order to reduce the computational complexity, the multi resolution strategy of Pyramid is used to calculate the motion vector of the frame; Finally, qualitative and quantitative analysis of the effect of the algorithm is carried out. The results show that the proposed algorithm has better stability compared with image stabilization based on the traditional optical-flow motion vector estimation method.

  15. Inner structure detection by optical tomography technology based on feedback of microchip Nd:YAG lasers.

    Science.gov (United States)

    Xu, Chunxin; Zhang, Shulian; Tan, Yidong; Zhao, Shijie

    2013-05-20

    We describe a new optical tomography technology based on feedback of microchip Nd:YAG lasers. In the case of feedback light frequency-shifted, light can be magnified by a fact of 10(6) in the Nd:YAG microchip lasers, which makes it possible to realize optical tomography with a greater depth than current optical tomography. The results of the measuring and imaging of kinds of samples are presented, which demonstrate the feasibility and potential of this approach in the inner structure detection. The system has a lateral resolution of ~1 μm, a vertical resolution of 15 μm and a longitudinal scanning range of over 10mm.

  16. Ultrastable assembly and integration technology for ground- and space-based optical systems.

    Science.gov (United States)

    Ressel, Simon; Gohlke, Martin; Rauen, Dominik; Schuldt, Thilo; Kronast, Wolfgang; Mescheder, Ulrich; Johann, Ulrich; Weise, Dennis; Braxmaier, Claus

    2010-08-01

    Optical metrology systems crucially rely on the dimensional stability of the optical path between their individual optical components. We present in this paper a novel adhesive bonding technology for setup of quasi-monolithic systems and compare selected characteristics to the well-established state-of-the-art technique of hydroxide-catalysis bonding. It is demonstrated that within the measurement resolution of our ultraprecise custom heterodyne interferometer, both techniques achieve an equivalent passive path length and tilt stability for time scales between 0.1 mHz and 1 Hz. Furthermore, the robustness of the adhesive bonds against mechanical and thermal inputs has been tested, making this new bonding technique in particular a potential option for interferometric applications in future space missions. The integration process itself is eased by long time scales for alignment, as well as short curing times.

  17. New radiological material detection technologies for nuclear forensics: Remote optical imaging and graphene-based sensors.

    Energy Technology Data Exchange (ETDEWEB)

    Harrison, Richard Karl [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Martin, Jeffrey B. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Wiemann, Dora K. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Choi, Junoh [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Howell, Stephen W. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)

    2015-09-01

    We developed new detector technologies to identify the presence of radioactive materials for nuclear forensics applications. First, we investigated an optical radiation detection technique based on imaging nitrogen fluorescence excited by ionizing radiation. We demonstrated optical detection in air under indoor and outdoor conditions for alpha particles and gamma radiation at distances up to 75 meters. We also contributed to the development of next generation systems and concepts that could enable remote detection at distances greater than 1 km, and originated a concept that could enable daytime operation of the technique. A second area of research was the development of room-temperature graphene-based sensors for radiation detection and measurement. In this project, we observed tunable optical and charged particle detection, and developed improved devices. With further development, the advancements described in this report could enable new capabilities for nuclear forensics applications.

  18. Mono-Cycle Photonics and Optical Scanning Tunneling Microscopy Route to Femtosecond Ångstrom Technology

    CERN Document Server

    Yamashita, Mikio; Morita, Ryuji

    2005-01-01

    "Mono-Cycle Photonics and Optical Scanning Tunneling Microscopy" deals with both the ultrashort laser-pulse technology in the few- to mono-cycle region and the laser-surface-controlled scanning-tunneling microscopy (STM) extending into the spatiotemporal extreme technology. The former covers the theory of nonlinear pulse propagation beyond the slowly-varing-envelope approximation, the generation and active chirp compensation of ultrabroadband optical pulses, the amplitude and phase characterization of few- to mono-cycle pulses, and the feedback field control for the mono-cycle-like pulse generation. In addition, the wavelength-multiplex shaping of ultrabroadband pulse is described. The latter covers the CW-laser-excitation STM, the femtosecond-time-resolved STM and atomic-level surface phenomena controlled by femtosecond pulses.

  19. Technology of fiber-optic temperature sensing and its application in temperature measuring of gob area

    Institute of Scientific and Technical Information of China (English)

    LIU Jing-wen; HUANG Li-ming

    2011-01-01

    Based on advantages of technology of distributive fiber-optic temperature sensing and specific to its applications in monitoring mine conflagration, the corresponding Processes such as connection arrangement, signal transmission and monitoring were illustrated. As applied in Sitai Coal Mine of Datong Coal Mine Group Co., this method is effective and accurate and could provide reliable gist for monitoring spontaneous combustion in gob area of mines.

  20. Optical coherence tomography—current technology and applications in clinical and biomedical research

    DEFF Research Database (Denmark)

    Marschall, Sebastian; Sander, Birgit; Mogensen, Mette

    2011-01-01

    Optical coherence tomography (OCT) is a noninvasive imaging technique that provides real-time two- and three-dimensional images of scattering samples with micrometer resolution. By mapping the local reflectivity, OCT visualizes the morphology of the sample. In addition, functional properties such...... biology. The number of companies involved in manufacturing OCT systems has increased substantially during the last few years (especially due to its success in opthalmology), and this technology can be expected to continue to spread into various fields of application....

  1. Optical coherence tomography-current technology and applications in clinical and biomedical research

    DEFF Research Database (Denmark)

    Marschall, Sebastian; Sander, Birgit; Mogensen, Mette

    2011-01-01

    Optical coherence tomography (OCT) is a noninvasive imaging technique that provides real-time two- and three-dimensional images of scattering samples with micrometer resolution. By mapping the local reflectivity, OCT visualizes the morphology of the sample. In addition, functional properties such...... biology. The number of companies involved in manufacturing OCT systems has increased substantially during the last few years (especially due to its success in opthalmology), and this technology can be expected to continue to spread into various fields of application....

  2. Dense all-optical WDM-SCM technology for high-speed computer interconnects

    Science.gov (United States)

    Ih, Charles S.; Tian, Rongsheng; Zhou, H. X.; Xia, Xiang-Gen

    1993-07-01

    We describe a dense and flexible all optical multi-channel communication system for high speed computer interconnects. The system can provide 10 Gb/s for each individual node with a total system capacity to 250 Gb/s using currently available technologies. The system capacity can be scaled to 1 Tb/s using optical amplifiers with a broader bandwidth and higher modulations. The system is based on the multi-beam (heterodyne) modulator (MBM) recently demonstrated in our laboratory and other current technologies in tunable laser arrays and acousto-optical tunable filter (AOTF). Each MBM automatically forms a high frequency microwave sub-carrier multiplexing (SCM) with sub-carrier frequency to tens of GHz. A MBM with sub-carriers at 17 and 21 GHz has already been demonstrated and can be scaled to higher frequencies by using a higher frequency detector. Each SCM group may consist of up to 10 one-Gb/s channels and occupies only 1 nm spectral width. Therefore we can form a conventional WDM with 25 divisions within the bandwidth of commercially available optical amplifiers.

  3. Research on sensor technology of Lamb-wave signal acquisition using optical low-coherence

    Science.gov (United States)

    Zhu, Y. K.; Yang, C.; Li, X. W.; Chong, B.

    2012-10-01

    Non-destructive testing of composite materials is a key technology issue in equipment testing. Among the emerging new testing methods, Lamb-wave technology is getting more and more attention. This paper proposed a sensing method to acquire the Lamb-wave signal in thin plate based on optical low-coherence principles. Methods to acquire Lamb-wave in thin plate using optical low-coherence technology were analyzed, and the technical path of non-contact, high-precision method was chosen. Complete in-line experimental system and methods were designed and built up for testing. A sensor system based on Michelson low-coherence interferometer was set up. The distributed optical fiber sensors were arranged on the top of sample materials for signal detection. Mirrors to enhance reflection intensity were attached on the sample. The phase of sensing arm was modulated by PZT vibration. Then signals were detected and processed by Daubechies10 wavelet and Gabor wavelet. In-line testing of thin plate with features of high-precision and high signal-noise-ratio was realized, which is meaningful to dynamic testing of large-scale structure.

  4. Profiling the mitochondrial proteome of Leber's Hereditary Optic Neuropathy (LHON in Thailand: down-regulation of bioenergetics and mitochondrial protein quality control pathways in fibroblasts with the 11778G>A mutation.

    Directory of Open Access Journals (Sweden)

    Aung Win Tun

    Full Text Available Leber's Hereditary Optic Neuropathy (LHON is one of the commonest mitochondrial diseases. It causes total blindness, and predominantly affects young males. For the disease to develop, it is necessary for an individual to carry one of the primary mtDNA mutations 11778G>A, 14484T>C or 3460G>A. However these mutations are not sufficient to cause disease, and they do not explain the characteristic features of LHON such as the higher prevalence in males, incomplete penetrance, and relatively later age of onset. In order to explore the roles of nuclear encoded mitochondrial proteins in development of LHON, we applied a proteomic approach to samples from affected and unaffected individuals from 3 pedigrees and from 5 unrelated controls. Two-dimensional electrophoresis followed by MS/MS analysis in the mitochondrial lysate identified 17 proteins which were differentially expressed between LHON cases and unrelated controls, and 24 proteins which were differentially expressed between unaffected relatives and unrelated controls. The proteomic data were successfully validated by western blot analysis of 3 selected proteins. All of the proteins identified in the study were mitochondrial proteins and most of them were down regulated in 11778G>A mutant fibroblasts. These proteins included: subunits of OXPHOS enzyme complexes, proteins involved in intermediary metabolic processes, nucleoid related proteins, chaperones, cristae remodelling proteins and an anti-oxidant enzyme. The protein profiles of both the affected and unaffected 11778G>A carriers shared many features which differed from those of unrelated control group, revealing similar proteomic responses to 11778G>A mutation in both affected and unaffected individuals. Differentially expressed proteins revealed two broad groups: a cluster of bioenergetic pathway proteins and a cluster involved in protein quality control system. Defects in these systems are likely to impede the function of retinal ganglion

  5. Profiling the mitochondrial proteome of Leber's Hereditary Optic Neuropathy (LHON) in Thailand: down-regulation of bioenergetics and mitochondrial protein quality control pathways in fibroblasts with the 11778G>A mutation.

    Science.gov (United States)

    Tun, Aung Win; Chaiyarit, Sakdithep; Kaewsutthi, Supannee; Katanyoo, Wanphen; Chuenkongkaew, Wanicha; Kuwano, Masayoshi; Tomonaga, Takeshi; Peerapittayamongkol, Chayanon; Thongboonkerd, Visith; Lertrit, Patcharee

    2014-01-01

    Leber's Hereditary Optic Neuropathy (LHON) is one of the commonest mitochondrial diseases. It causes total blindness, and predominantly affects young males. For the disease to develop, it is necessary for an individual to carry one of the primary mtDNA mutations 11778G>A, 14484T>C or 3460G>A. However these mutations are not sufficient to cause disease, and they do not explain the characteristic features of LHON such as the higher prevalence in males, incomplete penetrance, and relatively later age of onset. In order to explore the roles of nuclear encoded mitochondrial proteins in development of LHON, we applied a proteomic approach to samples from affected and unaffected individuals from 3 pedigrees and from 5 unrelated controls. Two-dimensional electrophoresis followed by MS/MS analysis in the mitochondrial lysate identified 17 proteins which were differentially expressed between LHON cases and unrelated controls, and 24 proteins which were differentially expressed between unaffected relatives and unrelated controls. The proteomic data were successfully validated by western blot analysis of 3 selected proteins. All of the proteins identified in the study were mitochondrial proteins and most of them were down regulated in 11778G>A mutant fibroblasts. These proteins included: subunits of OXPHOS enzyme complexes, proteins involved in intermediary metabolic processes, nucleoid related proteins, chaperones, cristae remodelling proteins and an anti-oxidant enzyme. The protein profiles of both the affected and unaffected 11778G>A carriers shared many features which differed from those of unrelated control group, revealing similar proteomic responses to 11778G>A mutation in both affected and unaffected individuals. Differentially expressed proteins revealed two broad groups: a cluster of bioenergetic pathway proteins and a cluster involved in protein quality control system. Defects in these systems are likely to impede the function of retinal ganglion cells, and may lead

  6. Aircraft corrosion and crack inspection using advanced magneto-optic imaging technology

    Science.gov (United States)

    Thome, David K.; Fitzpatrick, Gerald L.; Skaugset, Richard L.; Shih, William C.

    1996-11-01

    A next generation magneto-optic imaging system, the MOI 303, has recently been introduced with the ability to generate real-time, complete, 2D eddy current images of cracks and corrosion in aircraft. The new imaging system described features advanced, digital remote control operation and on- screen display of setup parameters for ease of use. This instrument gives the inspector the capability to more rapidly scan large surfaces areas. The magneto-optic/eddy current imaging technology has already been formally approved for inspection of surface cracking on an aircraft fuselage. The improved magneto-optic imager is now poised to aid rapid inspection for corrosion and subsurface cracking. Previous magneto-optic imaging systems required the inspector to scan the surface twice for complete inspection coverage: a second scan was necessary with the imager rotated about 90 degrees from the orientation of the first pass. However, by providing eddy current excitation simultaneously from two orthogonal directions, complete, filled-in magneto-optic images are now generated regardless of the orientation of the imager. THese images are considerably easier to interpret and evaluate. In addition, there is a synergism obtained in applying eddy current excitation simultaneously in multiple directions: better penetration is obtained and the resulting images have better signal to noise levels compared to those produced with eddy current excitation applied only in one direction. Examples of these improved images are presented.

  7. Mining the granule proteome

    DEFF Research Database (Denmark)

    Albrethsen, Jakob; Goetze, Jens P; Johnsen, Anders H

    2015-01-01

    Proteomics of secretory granules is an emerging strategy for identifying secreted proteins, including potentially novel candidate biomarkers and peptide hormones. In addition, proteomics can provide information about the abundance, localization and structure (post-translational modification) of g...

  8. The outlook of innovative optical-electronic technologies implementation in transportation

    Science.gov (United States)

    Shilina, Elena V.; Ryabichenko, Roman B.

    2005-06-01

    Information and telecommunication technologies (ITT) are already tool economic development of society and their role will grow. The first task is providing of information security of ITT that is necessary for it distribution in "information" society. The state policy of the leading world countries (USA, France, Japan, Great Britain and China) is focused on investment huge funds in innovative technologies development. Within the next 4-6 years the main fiber-optic transfer lines will have data transfer speed 40 Gbit/s, number of packed channels 60-200 that will provide effective data transfer speed 2,4-8 Tbit/s. Photonic-crystalline fibers will be promising base of new generation fiber-optic transfer lines. The market of information imaging devices and digital photo cameras will be grown in 3-5 times. Powerful lasers based on CO2 and Nd:YAG will be actively used in transport machinery construction when producing aluminum constructions of light rolling-stock. Light-emitting diodes (LEDs) will be base for energy saving and safety light sources used for vehicles and indoor lighting. For example, in the USA cost reducing for lighting will be 200 billion dollars. Implementation analysis of optic electronic photonic technologies (OPT) in ground and aerospace systems shows that they provide significant increasing of traffic safety, crew and passengers comfort with help of smart vehicles construction and non-contact dynamic monitoring both transport facilities (for example, wheel flanges) and condition of rail track (road surface), equipping vehicles with night vision equipment. Scientific-technical programs of JSC "RZD" propose application of OPT in new generation systems: axle-box units for coaches and freight cars monitoring when they are moved, track condition analysis, mechanical stress and permanent way irregularity detection, monitoring geometric parameters of aerial contact wire, car truck, rail and wheel pair roll surface, light signals automatic detection from

  9. Research of subdivision driving technology for brushless DC motors in optical fiber positioning

    Science.gov (United States)

    Kan, Yi; Gu, Yonggang; Zhu, Ye; Zhai, Chao

    2016-07-01

    In fiber spectroscopic telescopes, optical fiber positioning units are used to position thousands of fibers on the focal plane quickly and precisely. Stepper motors are used in existing units, however, it has some inherent deficiencies, such as serious heating and low efficiency. In this work, the universally adopted subdivision driving technology for stepper motors is transplanted to brushless DC motors. It keeps the advantages of stepper motors such as high positioning accuracy and resolution, while overcomes the disadvantages mentioned above. Thus, this research mainly focuses on develop a novel subdivision driving technology for brushless DC motor. By the proving of experiments of online debug and subdivision speed and position, the proposed brushless DC motor subdivision technology can achieve the expected functions.

  10. The UCSC Proteome Browser

    OpenAIRE

    Hsu, Fan; Tom H Pringle; Kuhn, Robert M.; Karolchik, Donna; Diekhans, Mark; Haussler, David; Kent, W. James

    2004-01-01

    The University of California Santa Cruz (UCSC) Proteome Browser provides a wealth of protein information presented in graphical images and with links to other protein-related Internet sites. The Proteome Browser is tightly integrated with the UCSC Genome Browser. For the first time, Genome Browser users have both the genome and proteome worlds at their fingertips simultaneously. The Proteome Browser displays tracks of protein and genomic sequences, exon structure, polarity, hydrophobicity, lo...

  11. Integration of photodetectors with lasers for optical interconnects using 200 mm waferscale III-V/SOI technology

    DEFF Research Database (Denmark)

    Spuesens, Thijs; Liu, Liu; Vermeulen, Diedrik;

    2011-01-01

    We demonstrate efficient photodetectors on top of a laser epitaxial structure completely fabricated using 200 mm wafer scale III-V/SOI technology enabling very dense integration of lasers and detectors for optical interconnect circuits....

  12. International Conference on New Technologies in the Humanities and Fourth International Conference on Optics Within Life Sciences

    CERN Document Server

    Bally, Gert

    1997-01-01

    New high-tech developments in the field of optics show increasing applicability not only in classical technological fields but also in the humanities. This book contains selected contributions to an international, interdisciplinary joint conference on "New Technologies in the Humanities" and "Optics Within Life Sciences". Its objective is to forward interdisciplinary information and communication between specialists in optics as well as in medicine, biology, environmental sciences, and cultural heritage. It is unique as a presentation of new optical technologies for cultural heritage protection. The contributions cover international research activities in the areas of archaeological research and new technologies, holography and interferometry, material analysis, laser cleaning, pattern recognition, unconventional microscopy, spectroscopial techniques, and profilometry.

  13. NASA's first in-space optical gyroscope: A technology experiment on the X ray Timing Explorer spacecraft

    Science.gov (United States)

    Unger, Glenn; Kaufman, David M.; Krainak, Michael; Sanders, Glenn; Taylor, Bill; Schulze, Norman R.

    1993-01-01

    A technology experiment on the X-ray Timing Explorer spacecraft to determine the feasibility of Interferometric Fiber Optic Gyroscopes for space flight navigation is described. The experiment consists of placing a medium grade fiber optic gyroscope in parallel with the spacecraft's inertial reference unit. The performance of the fiber optic gyroscope will be monitored and compared to the primary mechanical gyroscope's performance throughout the two-year mission life.

  14. Microbial proteomics using mass spectrometry.

    Science.gov (United States)

    Hines, Harry B

    2012-01-01

    Proteomic analyses involve a series of intricate, interdependent steps involving approaches and technical issues that must be fully coordinated to obtain the optimal amount of required information about the test subject. Fortunately, many of these steps are common to most test subjects, requiring only modifications to or, in some cases, substitution of some of the steps to ensure they are relevant to the desired objective of a study. This fortunate occurrence creates an essential core of proteomic approaches and techniques that are consistently available for most studies, regardless of test subject. In this chapter, an overview of some of these core approaches, techniques, and mass spectrometric instrumentation is given, while indicating how such steps are useful for and applied to bacterial investigations. To exemplify how such proteomic concepts and techniques are applicable to bacterial investigations, a practical, quantitative method useful for bacterial proteomic analysis is presented with a discussion of possibilities, pitfalls, and some emerging technology to provide a compilation of information from the diverse literature that is intermingled with experimental experience.

  15. MAPU: Max-Planck Unified database of organellar, cellular, tissue and body fluid proteomes

    DEFF Research Database (Denmark)

    Zhang, Yanling; Zhang, Yong; Adachi, Jun;

    2007-01-01

    Mass spectrometry (MS)-based proteomics has become a powerful technology to map the protein composition of organelles, cell types and tissues. In our department, a large-scale effort to map these proteomes is complemented by the Max-Planck Unified (MAPU) proteome database. MAPU contains several...... body fluid proteomes; including plasma, urine, and cerebrospinal fluid. Cell lines have been mapped to a depth of several thousand proteins and the red blood cell proteome has also been analyzed in depth. The liver proteome is represented with 3200 proteins. By employing high resolution MS......://www.mapuproteome.com using a clickable interface of cell or body parts. Proteome data can be queried across proteomes by protein name, accession number, sequence similarity, peptide sequence and annotation information. More than 4500 mouse and 2500 human proteins have already been identified in at least one proteome. Basic...

  16. Optical Multi-Gas Monitor Technology Demonstration on the International Space Station

    Science.gov (United States)

    Pilgrim, Jeffrey S.; Wood, William R.; Casias, Miguel E.; Vakhtin, Andrei B.; Johnson, Michael D.; Mudgett, Paul D.

    2014-01-01

    The International Space Station (ISS) employs a suite of portable and permanently located gas monitors to insure crew health and safety. These sensors are tasked with functions ranging from fixed mass spectrometer based major constituents analysis to portable electrochemical sensor based combustion product monitoring. An all optical multigas sensor is being developed that can provide the specificity of a mass spectrometer with the portability of an electrochemical cell. The technology, developed under the Small Business Innovation Research program, allows for an architecture that is rugged, compact and low power. A four gas version called the Multi-Gas Monitor was launched to ISS in November 2013 aboard Soyuz and activated in February 2014. The portable instrument is comprised of a major constituents analyzer (water vapor, carbon dioxide, oxygen) and high dynamic range real-time ammonia sensor. All species are sensed inside the same enhanced path length optical cell with a separate vertical cavity surface emitting laser (VCSEL) targeted at each species. The prototype is controlled digitally with a field-programmable gate array/microcontroller architecture. The optical and electronic approaches are designed for scalability and future versions could add three important acid gases and carbon monoxide combustion product gases to the four species already sensed. Results obtained to date from the technology demonstration on ISS are presented and discussed.

  17. 浅论光纤通信技术%Optical Fiber Communication Technology Study

    Institute of Scientific and Technical Information of China (English)

    封晓燕

    2011-01-01

    Optical fiber communication in China has nearly 30 years history of use,this history is the history of the development of optical communication technology and the development of optical fiber and cable history.Loss of optical fiber communication because of its low transmission frequency bandwidth, large capacity, small size,light weight,anti-electromagnetic interference,crosstalk is not easy, abundant resources,etc.,and much favored by the industry developed rapidly.Currently, fiber optic cable has been wired into all areas of communications,including telecommunications,radio communication,power communication,oil and communications,and military communications.In this paper, Analysis of the Optical Fiber Communication Research and Development.%光纤通信在我国已有近30年的使用历史,这段历史也就是光通信技术的发展史和光纤光缆的发展史。光纤通信因其具有的损耗低、传输频带宽、容量大、体积小、重量轻、抗电磁干扰、不易串音、资源丰富等优点,而备受业内人士青睐,发展非常迅速。目前,光纤光缆已经进入了有线通信的各个领域,包括邮电通信、广播通信、电力通信、石油通信和军用通信等领域。本文主要浅析我国光纤通信研究现状及其发展。

  18. Human saliva proteome: an overview

    Science.gov (United States)

    Griffin, Timothy J.

    2014-06-01

    Human saliva contains a rich mixture of biomolecules. Proteins are a major component of this mixture. Given their role as the molecular effectors within biological systems, ranging from catalysis to transport to structure, proteins have great potential as biomarkers of health and disease. The ability to collect these salivary biomarkers easily using non-invasive means makes saliva proteins even more attractive for diagnostic applications. Thousands of proteins are now to be known to be present in human saliva - discovered using proteomic technologies. Emerging technologies are now making it possible to go beyond large-scale cataloging of salivary proteins. These include approaches to catalog protein contributions from the community of microorganisms residing in the oral cavity (metaproteomics) that may reflect the health state of the human host. New mass spectrometry-based proteomics methods are also emerging, shifting the emphasis from large-scale discovery experiments to hypothesis-driven assays for profiling proteins of interest within saliva, enabling validation of their association with specific health conditions. This paper provides a brief overview of efforts to catalog the proteome of human saliva. Recent developments making possible characterization of the metaproteome of human saliva will be discussed, and technologies driving new mass spectrometry-based assays for targeted analysis of proteins within complex samples, such as saliva.

  19. Fabrication of fiber-optic broadband ultrasound emitters by micro-opto-mechanical technology

    Science.gov (United States)

    Belsito, L.; Vannacci, E.; Mancarella, F.; Ferri, M.; Veronese, G. P.; Biagi, E.; Roncaglia, A.

    2014-08-01

    A micro-opto-mechanical system (MOMS) technology for the fabrication of fiber-optic optoacoustic emitters is presented. The described devices are based on the thermoelastic generation of ultrasonic waves from patterned carbon films obtained by the controlled pyrolysis of photoresist layers and fabricated on miniaturized single-crystal silicon frames used to mount the emitters on the tip of an optical fiber. Thanks to the micromachining process adopted, high miniaturization levels are reached in the fabrication of the emitters, and self-standing devices on optical fiber with diameter around 350 µm are demonstrated, potentially suited to minimally invasive medical applications. The functional testing of fiber-optic emitter prototypes in water performed by using a 1064 nm Q-switched Nd-YAG excitation laser source is also presented, yielding broadband emission spectra extended from low frequencies up to more than 40 MHz, and focused emission fields with a maximum peak-to-peak pressure level of about 1.2 MPa at a distance of 1 mm from the devices.

  20. Printing polymer optical waveguides on conditioned transparent flexible foils by using the aerosol jet technology

    Science.gov (United States)

    Reitberger, Thomas; Hoffmann, Gerd-Albert; Wolfer, Tim; Overmeyer, Ludger; Franke, Joerg

    2016-09-01

    The optical data transfer is considered as the future of signal transfer due to its various advantages compared to conventional copper-based technologies. The Aerosol Jet Printing (AJP) technology offers the opportunity to print materials with high viscosities, such as liquid transparent polymer adhesives (epoxy resins), on almost any possible substrate material and even in third dimension. This paper introduces a new flexible and comparatively cost-effective way of generating polymer optical waveguides through AJP. Furthermore, the conditioning of the substrate material and the printing process of planar waveguides are presented. In the first step, two lines with hydrophobic behavior are applied on foil material (PMMA, PVC, PI) by using a flexographic printing machine. These silicone based patterns containing functional polymer form barriers for the core material due to their low surface energy after curing. In the second step, the core material (liquid polymer, varnish) is printed between the barrier lines. Because of the hydrophobic behavior of the lines, the contact angle between the substrate surface and the liquid core material is increased which yields to higher aspect ratio. The distance between the barrier lines is at least 100 μm, which defines the width of the waveguide. The minimum height of the core shall be 50 μm. After UV-curing of the core polymer, the cladding material is printed on the top. This is also applied by using the AJP technology. Various tests were performed to achieve the optimal surface properties for adequate adhesion and machine process parameters.

  1. Optical pH detector based on LTCC and sol-gel technologies

    Science.gov (United States)

    Tadaszak, R. J.; Łukowiak, A.; Golonka, L. J.

    2013-01-01

    This paper presents an investigation on using sol-gel thin film as a material for sensors application in LTCC (Low Temperature Co-fired Ceramics) technology. This material gives the opportunity to make new, low-cost highly integrated optoelectronic devices. Sensors with optical detection are a significant part of these applications. They can be used for quick and safe diagnostics of some parameters. Authors present a pH detector with the optical detection system made of the LTCC material. The main part of the device is a flow channel with the chamber and sol-gel active material. The silica sol-gel with bromocresol green indicator was used. As the absorbance of sol-gel layer changes with the pH value of a measured medium, the transmitted light power was measured. The pH detector was integrated with the electronic components on the LTCC substrate.

  2. Data Fusion Based on Optical Technology for Observation of Human Manipulation

    Science.gov (United States)

    Falco, Pietro; De Maria, Giuseppe; Natale, Ciro; Pirozzi, Salvatore

    2012-01-01

    The adoption of human observation is becoming more and more frequent within imitation learning and programming by demonstration approaches (PbD) to robot programming. For robotic systems equipped with anthropomorphic hands, the observation phase is very challenging and no ultimate solution exists. This work proposes a novel mechatronic approach to the observation of human hand motion during manipulation tasks. The strategy is based on the combined use of an optical motion capture system and a low-cost data glove equipped with novel joint angle sensors, based on optoelectronic technology. The combination of the two information sources is obtained through a sensor fusion algorithm based on the extended Kalman filter (EKF) suitably modified to tackle the problem of marker occlusions, typical of optical motion capture systems. This approach requires a kinematic model of the human hand. Another key contribution of this work is a new method to calibrate this model.

  3. Cleaning mechanism of particle contaminants on large aperture optical components by using air knife sweeping technology

    Science.gov (United States)

    Niu, Longfei; Liu, Hao; Miao, Xinxiang; Lv, Haibing; Yuan, Xiaodong; Zhou, Hai; Yao, Caizhen; Zhou, Guorui; Li, Qin

    2017-05-01

    The cleaning mechanism of optical surface particle contaminants in the light pneumatic tube was simulated based on the static equations and JKR model. Cleaning verification experiment based on air knife sweeping system and on-line monitoring system in high power laser facility was set up in order to verify the simulated results. Results showed that the removal ratio is significantly influenced by sweeping velocity and angle. The removal ratio can reach to 94.3% by using higher input pressure of the air knife, demonstrating that the air knife sweeping technology is useful for maintaining the surface cleanliness of optical elements, and thus guaranteeing the long-term stable running of the high power laser facility.

  4. Generation-X mirror technology development plan and the development of adjustable x-ray optics

    Science.gov (United States)

    Reid, Paul B.; Davis, William; O'Dell, Stephen; Schwartz, Daniel A.; Tolier-McKinstry, Susan; Wilke, Rudeger H. T.; Zhang, William

    2009-08-01

    Generation-X is being studied as an extremely high resolution, very large area grazing incidence x-ray telescope. Under a NASA Advanced Mission Concepts Study, we have developed a technology plan designed to lead to the 0.1 arcsec (HPD) resolution adjustable optics with 50 square meters of effective area necessary to meet Generation-X requirements. We describe our plan in detail. In addition, we report on our development activities of adjustable grazing incidence optics via the fabrication of bimorph mirrors. We have successfully deposited thin-film piezo-electric material on the back surface of thin glass mirrors. We report on the electrical and mechanical properties of the bimorph mirrors. We also report on initial finite element modeling of adjustable grazing incidence mirrors; in particular, we examine the impact of how the mirrors are supported - the boundary conditions - on the deformations which can be achieved.

  5. Research on diversity receive technology for wireless optical communication using PPM in weak turbulence atmosphere channel

    Science.gov (United States)

    Liu, Yang; Zhang, Guo-an

    2014-09-01

    In order to mitigate atmospheric turbulence, the free space optical (FSO) system model with spatial diversity is analyzed based on intensity detection pulse position modulation (PPM) in the weak turbulence atmosphere. The slot error rate (SER) calculating formula of the system without diversity is derived under pulse position modulation firstly. Then as a benchmark, independent of identical distribution, the average slot error rates of the three linear combining technologies, which are the maximal ratio combining (MRC), equal gain combining (EGC) and selection combining (SelC), are compared. Simulation results show that the performance of system is the best improved by MRC, followed by EGC, and is poor by SelC, but SelC is simpler and more convenient. Spatial diversity is efficient to improve the performance and has strong ability on resistance to atmospheric channel decline. The above scheme is more suitable for optical wireless communication systems.

  6. Review of biomedical optical imaging—a powerful, non-invasive, non-ionizing technology for improving in vivo diagnosis

    Science.gov (United States)

    Balas, Costas

    2009-10-01

    This paper reviews the recent developments in the field of biomedical optical imaging, emphasizing technologies that have been moved from 'bench top to bedside'. Important new developments in this field allow for unprecedented visualization of the tissue microstructure and enable quantitative mapping of disease-specific endogenous and exogenous substances. With these advances, optical imaging technologies are becoming powerful clinical tools for non-invasive and objective diagnosis, guided treatment and monitoring therapies. Recent developments in visible and infrared diffuse spectroscopy and imaging, spectral imaging, optical coherence tomography, confocal imaging, molecular imaging and dynamic spectral imaging are presented together with their derivative medical devices. Their perspectives and challenges are discussed.

  7. Integration of proteomics into systems biology of cancer.

    Science.gov (United States)

    Hanash, S; Schliekelman, M; Zhang, Q; Taguchi, A

    2012-01-01

    Deciphering the complexity and heterogeneity of cancer, benefits from integration of proteomic level data into systems biology efforts. The opportunities available as a result of advances in proteomic technologies, the successes to date, and the challenges involved in integrating diverse datasets are addressed in this review.

  8. Dentistry proteomics: from laboratory development to clinical practice.

    Science.gov (United States)

    Rezende, Taia M B; Lima, Stella M F; Petriz, Bernardo A; Silva, Osmar N; Freire, Mirna S; Franco, Octávio L

    2013-12-01

    Despite all the dental information acquired over centuries and the importance of proteome research, the cross-link between these two areas only emerged around mid-nineties. Proteomic tools can help dentistry in the identification of risk factors, early diagnosis, prevention, and systematic control that will promote the evolution of treatment in all dentistry specialties. This review mainly focuses on the evolution of dentistry in different specialties based on proteomic research and how these tools can improve knowledge in dentistry. The subjects covered are an overview of proteomics in dentistry, specific information on different fields in dentistry (dental structure, restorative dentistry, endodontics, periodontics, oral pathology, oral surgery, and orthodontics) and future directions. There are many new proteomic technologies that have never been used in dentistry studies and some dentistry areas that have never been explored by proteomic tools. It is expected that a greater integration of these areas will help to understand what is still unknown in oral health and disease.

  9. Optical waveguiding and applied photonics technological aspects, experimental issue approaches and measurements

    CERN Document Server

    Massaro, Alessandro

    2012-01-01

    Optoelectronics--technology based on applications light such as micro/nano quantum electronics, photonic devices, laser for measurements and detection--has become an important field of research. Many applications and physical problems concerning optoelectronics are analyzed in Optical Waveguiding and Applied Photonics.The book is organized in order to explain how to implement innovative sensors starting from basic physical principles. Applications such as cavity resonance, filtering, tactile sensors, robotic sensor, oil spill detection, small antennas and experimental setups using lasers are a

  10. Overview of Fiber Optic Sensor Technologies for Strain/Temperature Sensing Applications in Composite Materials

    Directory of Open Access Journals (Sweden)

    Manjusha Ramakrishnan

    2016-01-01

    Full Text Available This paper provides an overview of the different types of fiber optic sensors (FOS that can be used with composite materials and also their compatibility with and suitability for embedding inside a composite material. An overview of the different types of FOS used for strain/temperature sensing in composite materials is presented. Recent trends, and future challenges for FOS technology for condition monitoring in smart composite materials are also discussed. This comprehensive review provides essential information for the smart materials industry in selecting of appropriate types of FOS in accordance with end-user requirements.

  11. Optical image encryption based on binary Fourier transform computer-generated hologram and pixel scrambling technology

    Science.gov (United States)

    Wang, Yong-Ying; Wang, Yu-Rong; Wang, Yong; Li, Hui-Juan; Sun, Wen-Jia

    2007-07-01

    A new method of optical image encryption with binary Fourier transform computer-generated hologram (CGH) and pixel-scrambling technology is presented. In this method, the orders of the pixel scrambling, as well as the encrypted image, are used as the keys to decrypt the original image. Therefore, higher security is achieved. Furthermore, the encrypted image is binary, so it is easy to be fabricated and robust against noise and distortion. Computer simulation results are given to verify the feasibility of this method and its robustness against occlusion and additional noise.

  12. Overview of Fiber Optic Sensor Technologies for Strain/Temperature Sensing Applications in Composite Materials.

    Science.gov (United States)

    Ramakrishnan, Manjusha; Rajan, Ginu; Semenova, Yuliya; Farrell, Gerald

    2016-01-15

    This paper provides an overview of the different types of fiber optic sensors (FOS) that can be used with composite materials and also their compatibility with and suitability for embedding inside a composite material. An overview of the different types of FOS used for strain/temperature sensing in composite materials is presented. Recent trends, and future challenges for FOS technology for condition monitoring in smart composite materials are also discussed. This comprehensive review provides essential information for the smart materials industry in selecting of appropriate types of FOS in accordance with end-user requirements.

  13. Characterization of the influence of strain on the optical properties of waveguides and microresonators in silicon-on-insulator technology

    NARCIS (Netherlands)

    Westerveld, W.J.; Harmsma, P.J.; Schmits, R.; Tabak, E.; Pozo Torres, J.M.; Urbach, H.P.; Yousefi, M.

    2011-01-01

    Silicon-on-insulator (SOI) technology has become one of the focus platforms for photonic integrated circuits (PICs). The CMOS technology opens the possibility for reliable mass fabrication of cost-effective photonic circuits. Recently there has been a growing interest in direct optical sensing of, f

  14. Proteomics and Its Application in Biomarker Discovery and Drug Development

    Institute of Scientific and Technical Information of China (English)

    He Qing-Yu; Chiu Jen-Fu

    2004-01-01

    Proteomics is a research field aiming to characterize molecular and cellular dynamics in protein expression and function on a global level. The introduction of proteomics has been greatly broadening our view and accelerating our path in various medical researches. The most significant advantage of proteomics is its ability to examine a whole proteome or sub-proteome in a single experiment so that the protein alterations corresponding to a pathological or biochemical condition at a given time can be considered in an integrated way. Proteomic technology has been extensively used to tackle a wide variety of medical subjects including biomarker discovery and drug development. By complement with other new technique advance in genomics and bioinformatics,proteomics has a great potential to make considerable contribution to biomarker identification and revolutionize drug development process. A brief overview of the proteomic technologies will be provided and the application of proteomics in biomarker discovery and drug development will be discussed using our current research projects as examples.

  15. Optical gesture sensing and depth mapping technologies for head-mounted displays: an overview

    Science.gov (United States)

    Kress, Bernard; Lee, Johnny

    2013-05-01

    Head Mounted Displays (HMDs), and especially see-through HMDs have gained renewed interest in recent time, and for the first time outside the traditional military and defense realm, due to several high profile consumer electronics companies presenting their products to hit market. Consumer electronics HMDs have quite different requirements and constrains as their military counterparts. Voice comments are the de-facto interface for such devices, but when the voice recognition does not work (not connection to the cloud for example), trackpad and gesture sensing technologies have to be used to communicate information to the device. We review in this paper the various technologies developed today integrating optical gesture sensing in a small footprint, as well as the various related 3d depth mapping sensors.

  16. The application of confocal technology based on polycapillary X-ray optics in surface topography

    Energy Technology Data Exchange (ETDEWEB)

    Zhao, Guangcui, E-mail: zgcshirley@yahoo.cn [The Key Laboratory of Beam Technology and Material Modification of the Ministry of Education, Beijing Normal University, Beijing 100875 (China); College of Nuclear Science and Technology, Beijing Normal University, Beijing 100875 (China); Beijing Radiation Center, Beijing 100875 (China); Sun, Tianxi; Liu, Zhiguo; Yuan, Hao; Li, Yude; Liu, Hehe; Zhao, Weigang; Zhang, Ruixia; Min, Qin; Peng, Song [The Key Laboratory of Beam Technology and Material Modification of the Ministry of Education, Beijing Normal University, Beijing 100875 (China); College of Nuclear Science and Technology, Beijing Normal University, Beijing 100875 (China); Beijing Radiation Center, Beijing 100875 (China)

    2013-09-01

    A confocal micro-X-ray fluorescence (MXRF) technology based on polycapillary X-ray optics was proposed for determining surface topography. This confocal topography method involves elemental sensitivity and can be used to classify the objects according to their elemental composition while obtaining their surface topography. To improve the spatial resolution of this confocal topography technology, the center of the confocal micro-volume was overlapped with the output focal spot of the polycapillary X-ray, focusing the lens in the excitation channel. The input focal spot of the X-ray lens parallel to the detection channel was used to determine the surface position of the sample. The corresponding surface adaptive algorithm was designed to obtain the surface topography. The surface topography of a ceramic chip was obtained. This confocal MXRF surface topography method could find application in the materials sciences.

  17. Developing Magnetorheological Finishing (MRF) Technology for the Manufacture of Large-Aperture Optics in Megajoule Class Laser Systems

    Energy Technology Data Exchange (ETDEWEB)

    Menapace, J A

    2010-10-27

    Over the last eight years we have been developing advanced MRF tools and techniques to manufacture meter-scale optics for use in Megajoule class laser systems. These systems call for optics having unique characteristics that can complicate their fabrication using conventional polishing methods. First, exposure to the high-power nanosecond and sub-nanosecond pulsed laser environment in the infrared (>27 J/cm{sup 2} at 1053 nm), visible (>18 J/cm{sup 2} at 527 nm), and ultraviolet (>10 J/cm{sup 2} at 351 nm) demands ultra-precise control of optical figure and finish to avoid intensity modulation and scatter that can result in damage to the optics chain or system hardware. Second, the optics must be super-polished and virtually free of surface and subsurface flaws that can limit optic lifetime through laser-induced damage initiation and growth at the flaw sites, particularly at 351 nm. Lastly, ultra-precise optics for beam conditioning are required to control laser beam quality. These optics contain customized surface topographical structures that cannot be made using traditional fabrication processes. In this review, we will present the development and implementation of large-aperture MRF tools and techniques specifically designed to meet the demanding optical performance challenges required in large-aperture high-power laser systems. In particular, we will discuss the advances made by using MRF technology to expose and remove surface and subsurface flaws in optics during final polishing to yield optics with improve laser damage resistance, the novel application of MRF deterministic polishing to imprint complex topographical information and wavefront correction patterns onto optical surfaces, and our efforts to advance the technology to manufacture large-aperture damage resistant optics.

  18. Characterization of a Reconfigurable Free-Space Optical Channel for Embedded Computer Applications with Experimental Validation Using Rapid Prototyping Technology

    Directory of Open Access Journals (Sweden)

    Rafael Gil-Otero

    2007-02-01

    Full Text Available Free-space optical interconnects (FSOIs are widely seen as a potential solution to current and future bandwidth bottlenecks for parallel processors. In this paper, an FSOI system called optical highway (OH is proposed. The OH uses polarizing beam splitter-liquid crystal plate (PBS/LC assemblies to perform reconfigurable beam combination functions. The properties of the OH make it suitable for embedding complex network topologies such as completed connected mesh or hypercube. This paper proposes the use of rapid prototyping technology for implementing an optomechanical system suitable for studying the reconfigurable characteristics of a free-space optical channel. Additionally, it reports how the limited contrast ratio of the optical components can affect the attenuation of the optical signal and the crosstalk caused by misdirected signals. Different techniques are also proposed in order to increase the optical modulation amplitude (OMA of the system.

  19. Characterization of a Reconfigurable Free-Space Optical Channel for Embedded Computer Applications with Experimental Validation Using Rapid Prototyping Technology

    Directory of Open Access Journals (Sweden)

    Lim Theodore

    2007-01-01

    Full Text Available Free-space optical interconnects (FSOIs are widely seen as a potential solution to current and future bandwidth bottlenecks for parallel processors. In this paper, an FSOI system called optical highway (OH is proposed. The OH uses polarizing beam splitter-liquid crystal plate (PBS/LC assemblies to perform reconfigurable beam combination functions. The properties of the OH make it suitable for embedding complex network topologies such as completed connected mesh or hypercube. This paper proposes the use of rapid prototyping technology for implementing an optomechanical system suitable for studying the reconfigurable characteristics of a free-space optical channel. Additionally, it reports how the limited contrast ratio of the optical components can affect the attenuation of the optical signal and the crosstalk caused by misdirected signals. Different techniques are also proposed in order to increase the optical modulation amplitude (OMA of the system.

  20. [Review on label-free optical bio-sensing technology based on whisper-gallery-mode].

    Science.gov (United States)

    Jiang, Jun-feng; Liu, Tie-gen; Li, Hai-wei; Hui, Rong-qing; Liu, Kuni; Zhang, Yi-mo

    2010-11-01

    Optical biosensors are becoming an important tool for drug research and life science, and the label-free optical biosensor based on whisper-gallery-mode (WGM) is reviewed in the present paper. The WGM-based sensors are categorized into three types according to the microcavity structure. The biosensor using microsphere got extensive research because of high quality factor, and its response to protein, virus, and bacteria had been studied. The models based on single photon resonant state and perturbation theory were established. The biosensor using microdisk was proposed early since it can make use of mature lithography technology; however, the quality factor was increased greatly only after the thermal reflow process was introduced and single molecule measurement was then realized. The biosensor using microring has simpler mode structure and materials such as polymer, silicon nitride and silicon-on-insulator had been used for sensor fabrication. As a 3-dimension expansion, sensor using microtube can combine the optical channel and fluidic channel, which attracting more and more attention.

  1. Correction technology of a polarization lidar with a complex optical system.

    Science.gov (United States)

    Di, Huige; Hua, Hangbo; Cui, Yan; Hua, Dengxin; Li, Bo; Song, Yuehui

    2016-08-01

    A complex optical system used in polarization lidars often modifies the input polarization of the return signal so that it may significantly impact depolarization estimates and introduce errors to polarization lidar measurements. In most cases, retardation, depolarization, and misalignment of the system exist at the same time and interact with each other. Polarization effects of the system cannot be represented by a simple correction coefficient, so they cannot be removed using a traditional calibration method. Detailed analysis and correction technologies were provided to remove systematic biases in estimating depolarization values from a polarization lidar owing to multiple optical components. The Mueller matrices from an emitter to a receiver were calculated, and the expression for an aerosol depolarization parameter including system polarization effects was derived and obtained. In addition, the correction algorithm based on the Mueller matrix was introduced and provided. A polarization lidar was established, and the polarization characteristics of its optical components were measured with a laboratory ellipsometer; then, the Mueller matrix of the receiver was calculated and obtained. Lidar observations were performed, and our correction algorithm was applied to lidar field data. The results show that the correction method can significantly remove systematic polarization effects.

  2. Application of Distributed Optical Fiber Sensing Technology in the Anomaly Detection of Shaft Lining in Grouting

    Directory of Open Access Journals (Sweden)

    Chunde Piao

    2015-01-01

    Full Text Available The rupture of the shaft lining caused by grouting has seriously undermined the safety in coal mining. Based on BOTDR distributed optical fiber sensing technology, this paper studied the layout method of optical fiber sensors and the anomaly detection method of the deformation and obtained the evolution law of shaft deformation triggered by grouting. The research results showed that the bonding problem of optical fiber sensors in damp environment could be effectively solved, by applying the binder consisting of sodium silicate and cement. Through BOTDR-based deformation detection, the real-time deformation of the shaft lining caused by grouting was immediately spotted. By comparing the respective strain of shaft lining deformation and concrete deformation, the risk range of shaft lining grouting was identified. With the additional strain increment of the shaft lining triggered by each process of grouting, the saturated condition of grouting volume in strata was analyzed, providing an important technical insight into the field construction and the safety of the shaft lining.

  3. A Novel Monopulse Antenna Based on Quasi-Optical Technology at Sub-millimeter Wavelengths

    Science.gov (United States)

    Zhang, Long; Dou, Wenbin; Su, Hongyan; Zhang, Xiaojing

    2015-08-01

    In this paper, a novel monopulse antenna operating at sub-millimeter wavelengths is firstly proposed and developed based on quasi-optical (QO) technology. The developed monopulse antenna is composed of spherical thin lens, ellipsoid mirrors, plane mirrors, quasi-optical sum-difference comparator, and dielectric prisms. The parameters of quasi-optical elements are determined by using Gaussian-Beam theory. Then, the antenna configuration is simulated and further optimized by finite-difference time-domain (FDTD) method. The simulated results show good sum-difference performance, with the sidelobe levels below -10.0 dB and the null-depth approximately -35.0 dB at the center frequency of 375 GHz. A prototype of the proposed monopulse antenna is fabricated and measured. The measured results have a good agreement with the simulated results in the near-field test process. This type of QO monopulse antenna may be used as an excellent candidate for tracking system over 300 GHz.

  4. Progress in the indirect slumping technology development at MPE for lightweight x-ray optics

    Science.gov (United States)

    Wen, Mingwu; Proserpio, Laura; Breunig, Elias; Friedrich, Peter; Burwitz, Vadim; Madarasz, Emanuel

    2016-10-01

    Large X-ray telescopes for future observatories need to combine a big collecting area, meaning thin mirrors with large diameter, with good angular resolution. Structures have to be stiff enough to guarantee the correct profiles and positioning of such mirrors. Due to the mass limits of the launching rockets, lightweight materials and configurations are required.. The Slumped Glass Optic (SGO) group of the Max-Planck-Institute for Extraterrestrial physics (MPE) is developing the indirect slumping technology to comply with this need. This technique foresees the shaping at high temperature of thin glass foils, originally flat, to Wolter I design X-ray mirror segments, by using suitable moulds. During the thermal cycle inside an electrical oven the glass viscosity is such reduced that it allows its bending onto the mould. So the mould's shape is replicated while still maintaining the original micro-roughness of the glass on the non-contact side that is of fundamental importance for X-ray reflections. This replication process is particularly suitable for the manufacturing of several identical optical elements, which must successively be coated with the necessary reflective layer and then aligned and integrated into supporting structures. Numerous aspects of the technology have been studied in the past, such as the selection of mould and glass materials, and the corresponding optimization of the thermal cycle parameters. During the last year, we focused on different process set-ups. The current results and status of activities will be presented in the paper.

  5. Resilient backhaul network design using hybrid radio/free-space optical technology

    KAUST Repository

    Douik, Ahmed

    2016-07-26

    The radio-frequency (RF) technology is a scalable solution for the backhaul planning. However, its performance is limited in terms of data rate and latency. Free Space Optical (FSO) backhaul, on the other hand, offers a higher data rate but is sensitive to weather conditions. To combine the advantages of RF and FSO backhauls, this paper proposes a cost-efficient backhaul network using the hybrid RF/FSO technology. To ensure a resilient backhaul, the paper imposes a given degree of redundancy by connecting each node through K link-disjoint paths so as to cope with potential link failures. Hence, the network planning problem considered in this paper is the one of minimizing the total deployment cost by choosing the appropriate link type, i.e., either hybrid RF/FSO or optical fiber (OF), between each couple of base-stations while guaranteeing K link-disjoint connections, a data rate target, and a reliability threshold. The paper solves the problem using graph theory techniques. It reformulates the problem as a maximum weight clique problem in the planning graph, under a specified realistic assumption about the cost of OF and hybrid RF/FSO links. Simulation results show the cost of the different planning and suggest that the proposed heuristic solution has a close-to-optimal performance for a significant gain in computation complexity. © 2016 IEEE.

  6. High-precision, three-dimensional tracking of mouse whisker movements with optical motion capture technology

    Directory of Open Access Journals (Sweden)

    Snigdha eRoy

    2011-06-01

    Full Text Available The mystacial vibrissae or whiskers in rodents are sensitive tactile hairs emerging from both sides of the face. Rats and mice actively move these whiskers during exploration. The neuronal mechanisms controlling whisker movements and the sensory representation of whisker tactile information are widely studied as a model for sensorimotor processing in mammals. Studies of the natural whisker movement patterns during exploration and tactile examination are still in their early stages. Tracking the movements of whiskers is technically challenging as they move relatively fast and are very thin, particularly in mice. Existing systems detect light-beam interruptions by the whiskers or use high-speed video to track whisker movements in one or two dimensions. Here we describe a method for tracking the movements of mouse whiskers in 3 dimensions (3D using using optical motion capture technology. Optical motion capture technology tracks the movements of small retro-reflective markers attached to whiskers of a head-fixed mouse with a spatial resolution of <0.5mm in all three dimensions and a temporal resolution of 5msec (200 fps. The system stores the 3D coordinates of the marker’s trajectories onto hard disk allowing a detailed analysis of movement trajectories bilateral coordination.

  7. Optical coordinate scanners applied for the inspection of large scale housings produced in foundry technology

    Directory of Open Access Journals (Sweden)

    M. Grzelka

    2010-01-01

    Full Text Available The paper presents possibilities of the dimensional and geometry measurement of the large scale casting details with a coordinate measuring technique. In particular, the analysis has been devoted to the measurement strategy in case of the measurement of large scale detail (larger than 1000 mm made in foundry technology, with the 3D optical scanner. The attention was paid on the possibility created by the advanced software attached to the scanner for measurement data processing. Preparation to the geometrical accuracy analysis of the measured objects consisted of the identification of particular geometrical features based on the large number of probing points, as well as the creation of the coordinate systems derived from the best-fitting algorithms which calculate the inscribed or circumscribed geometrical elements. Analysis of accuracy in every probing point has been performed through the comparison of their coordinates with nominal values set by 3D model. Application of the 3D optical coordinate scanner with advanced measurement software for the manufacturing accuracy inspection is very useful in case of large scale details produced with foundry technologies and allows to carry out full accuracy analysis of the examined detail.

  8. Advanced manufacturing technologies for light-weight post- polished snap-together reflective optical system designs

    Science.gov (United States)

    Sweeney, Michael N.

    2002-09-01

    Fast, light weight, off-axis, aspheric, reflective optical designs are increasingly being designed and built for space-based remote sensing, fire control systems, aerial reconnaissance, cryovac instrumentation and laser scanning. Diamond point turning (DPT) is the technology of first resort for many of these applications. In many cases the best diamond machining technologies available cannot meet the desired requirements for system wavefront error and scatter. Aluminum, beryllium, AlBeMet and silicon carbide mirrors, layered with thin films of electroless nickel or silicon can be first diamond machined and then post polished to achieve greatly enhanced performance levels for surface scatter, wavefront error (WFE), and alignment registration. By application of post polishing using precise null testing techniques, the objectives of snap-together, or limited compensation alignment of aggressive reflective optical systems can be achieved that are well beyond the performance envelope achievable by diamond machining alone. This paper discusses the tradeoffs among materials and processes selection for post polished reflective systems and illustrates actual applications including telescopes for earth and Mars orbit, and a commercial, high speed, flat field scan engine.

  9. Proteomics: A new perspective for cancer

    Directory of Open Access Journals (Sweden)

    Basavaradhya Sahukar Shruthi

    2016-01-01

    Full Text Available In the past decades, several ground breaking discoveries in life science were made. The completion of sequencing the human genome certainly belongs to the key tasks successfully completed, representing a true milestone in the biomedicine. The accomplishment of the complete genome also brings along a new, even more challenging task for scientists: The characterization of the human proteome. Proteomics, the main tool for proteome research, is a relatively new and extremely dynamically evolving branch of science, focused on the evaluation of gene expression at proteome level. Due to the specific properties of proteins, current proteomics deals with different issues, such as protein identification, quantification, characterization of post-translational modification, structure and function elucidation, and description of possible interactions. This field incorporates technologies that can be applied to serum and tissue in order to extract important biological information in the form of biomarkers to aid clinicians and scientists in understanding the dynamic biology of their system of interest, such as a patient with cancer. The present review article provides a detail description of proteomics and its role in cancer research.

  10. Synchrotron radiation and structural proteomics

    CERN Document Server

    Pechkova, Eugenia

    2011-01-01

    This book presents an overview of the current state of research in both synchrotron radiation and structural proteomics from different laboratories worldwide. The book presents recent research results in the most advanced methods of synchrotron radiation analysis, protein micro- and nano crystallography, X-ray scattering and X-ray optics, coherent X-Ray diffraction, and laser cutting and contactless sample manipulation are described in details. The book focuses on biological applications and highlights important aspects such as radiation damage and molecular modeling.

  11. Proteomics in Argentina - limitations and future perspectives: A special emphasis on meat proteomics.

    Science.gov (United States)

    Fadda, Silvina; Almeida, André M

    2015-11-01

    Argentina is one of the most relevant countries in Latin America, playing a major role in regional economics, culture and science. Over the last 80 years, Argentinean history has been characterized by several upward and downward phases that had major consequences on the development of science in the country and most recently on proteomics. In this article, we characterize the evolution of Proteomics sciences in Argentina over the last decade and a half. We describe the proteomics publication output of the country in the framework of the regional and international contexts, demonstrating that Argentina is solidly anchored in a regional context, showing results similar to other emergent and Latin American countries, albeit still far from the European, American or Australian realities. We also provide a case-study on the importance of Proteomics to a specific sector in the area of food science: the use of bacteria of technological interest, highlighting major achievements obtained by Argentinean proteomics scientists. Finally, we provide a general picture of the endeavors being undertaken by Argentinean Proteomics scientists and their international collaborators to promote the Proteomics-based research with the new generation of scientists and PhD students in both Argentina and other countries in the Southern cone.

  12. Zigbee networking technology and its application in Lamost optical fiber positioning and control system

    Science.gov (United States)

    Jin, Yi; Zhai, Chao; Gu, Yonggang; Zhou, Zengxiang; Gai, Xiaofeng

    2010-07-01

    4,000 fiber positioning units need to be positioned precisely in LAMOST(Large Sky Area Multi-object Optical Spectroscopic Telescope) optical fiber positioning & control system, and every fiber positioning unit needs two stepper motors for its driven, so 8,000 stepper motors need to be controlled in the entire system. Wireless communication mode is adopted to save the installing space on the back of the focal panel, and can save more than 95% external wires compared to the traditional cable control mode. This paper studies how to use the ZigBee technology to group these 8000 nodes, explores the pros and cons of star network and tree network in order to search the stars quickly and efficiently. ZigBee technology is a short distance, low-complexity, low power, low data rate, low-cost two-way wireless communication technology based on the IEEE 802.15.4 protocol. It based on standard Open Systems Interconnection (OSI): The 802.15.4 standard specifies the lower protocol layers-the physical layer (PHY), and the media access control (MAC). ZigBee Alliance defined on this basis, the rest layers such as the network layer and application layer, and is responsible for high-level applications, testing and marketing. The network layer used here, based on ad hoc network protocols, includes the following functions: construction and maintenance of the topological structure, nomenclature and associated businesses which involves addressing, routing and security and a self-organizing-self-maintenance functions which will minimize consumer spending and maintenance costs. In this paper, freescale's 802.15.4 protocol was used to configure the network layer. A star network and a tree network topology is realized, which can build network, maintenance network and create a routing function automatically. A concise tree network address allocate algorithm is present to assign the network ID automatically.

  13. STEM CELLS AND PROTEOMICS

    Institute of Scientific and Technical Information of China (English)

    ZHOU Yong-ming; GUO Tian-nan; HUANG Shi-ang

    2006-01-01

    The distinctive features of proteomics are large-scale and high throughput. The key techniques of proteomics are two-dimensional gel electrophoresis, mass spectrometry and bioinformatics. Stem cell can differentiate into all kinds of cells, tissues and organs. There are many proteins and cytokines involved in the process of differentiation. Applying proteomics techniques to the research of the complex process of stem cell differentiation is of great importance to study the mechanism and applications of stem cell differentiation.

  14. Integrated multifunctional microfluidics for automated proteome analyses.

    Science.gov (United States)

    Osiri, John K; Shadpour, Hamed; Witek, Małgorzata A; Soper, Steven A

    2011-01-01

    integration. In this chapter, we will focus exclusively on the front-end processing microfluidic devices and systems for proteome processing, and not on the interface technology of these platforms to mass spectrometry due to the extensive reviews that already exist on these types of interfaces.

  15. Mitotic spindle proteomics in Chinese hamster ovary cells

    National Research Council Canada - National Science Library

    Bonner, Mary Kate; Poole, Daniel S; Xu, Tao; Sarkeshik, Ali; Yates, 3rd, John R; Skop, Ahna R

    2011-01-01

    .... Here, we report a proteomic study of the mitotic spindle from Chinese Hamster Ovary (CHO) cells. Four different isolations of metaphase spindles were subjected to Multi-dimensional Protein Identification Technology...

  16. Plasma proteomics to identify biomarkers - Application to cardiovascular diseases

    DEFF Research Database (Denmark)

    Beck, Hans Christian; Overgaard, Martin; Melholt Rasmussen, Lars

    2015-01-01

    , this technology may therefore identify new biomarkers that previously have not been associated with cardiovascular diseases. In this review, we summarize the key challenges and considerations, including strategies, recent discoveries and clinical applications in cardiovascular proteomics that may lead...

  17. Can Integrated Micro-Optical Concentrator Technology Revolutionize Flat-Plate Photovoltaic Solar Energy Harvesting?

    Science.gov (United States)

    Haney, Michael W.

    2015-12-01

    The economies-of-scale and enhanced performance of integrated micro-technologies have repeatedly delivered disruptive market impact. Examples range from microelectronics to displays to lighting. However, integrated micro-scale technologies have yet to be applied in a transformational way to solar photovoltaic panels. The recently announced Micro-scale Optimized Solar-cell Arrays with Integrated Concentration (MOSAIC) program aims to create a new paradigm in solar photovoltaic panel technology based on the incorporation of micro-concentrating photo-voltaic (μ-CPV) cells. As depicted in Figure 1, MOSAIC will integrate arrays of micro-optical concentrating elements and micro-scale PV elements to achieve the same aggregated collection area and high conversion efficiency of a conventional (i.e., macro-scale) CPV approach, but with the low profile and mass, and hopefully cost, of a conventional non-concentrated PV panel. The reduced size and weight, and enhanced wiring complexity, of the MOSAIC approach provide the opportunity to access the high-performance/low-cost region between the conventional CPV and flat-plate (1-sun) PV domains shown in Figure 2. Accessing this portion of the graph in Figure 2 will expand the geographic and market reach of flat-plate PV. This talk reviews the motivation and goals for the MOSAIC program. The diversity of the technical approaches to micro-concentration, embedded solar tracking, and hybrid direct/diffuse solar resource collection found in the MOSAIC portfolio of projects will also be highlighted.

  18. Molecular biology tools: proteomics techniques in biomarker discovery.

    Science.gov (United States)

    Lottspeich, Friedrich; Kellermann, Josef; Keidel, Eva-Maria

    2010-01-01

    Despite worldwide efforts biomarker discovery by plasma proteomics was not successful so far. Several reasons for this failure are obvious. Mainly, proteome diversity is remarkable between different individuals and is caused by genetic, environmental and life style parameters. To recognize disease related proteins that could serve as potential biomarkers is only feasible by investigating a non realizable large number of patients. Furthermore, plasma proteomics comprises enormous technical hurdles for quantitative analysis. High reproducibility of blood sampling in clinical routine is hard to achieve. Quantitative proteome analysis has to struggle with the complexity of millions of protein species comprising typical plasma proteins, cellular leakage proteins and antibodies and concentration differences of more than 1011 between high and low abundant proteins. Therefore, no successful quantitative and comprehensive plasma proteome analysis is reported so far. A novel proteomics strategy is proposed for biomarker discovery in plasma. Instead of comparing the plasma proteome of different individuals it is recommended to analyze the proteomes of different time points of a single individual during the development of a disease. This strategy is realized by the use of plasma of the Bavarian Red Cross Blood Bank, were three million samples are stored under standardized conditions. To achieve reliable data the isotope coded protein labelling proteomics technology was used.

  19. Technology of optical switch in all optical communication%全光通信中的光开关技术

    Institute of Scientific and Technical Information of China (English)

    李红春; 赵巧霞; 陶晓燕; 王豆豆

    2011-01-01

    Optical switch is the kernel device of all optical switchingCurrently the study on optical switch has become the focus of all optical communication. This paper summarized the principle of optical switch, analyzed the application of optical switch. The traditional mechanical, micro electro-mechanical system (MEMS) and thermo-optic switch were further divided, and their characteristics were pointed out. Then an evaluation system was put forward for optical switch assessment, by comparing the qualitative and quantitative of the four common optical switches,the advatnges and inadequacics of different types of optical switches were pointed out. Finauy,according to the trend of all optical communication, the large-scale array, high speed, transparent and low loss optical switch is the key development of direction.%光开关是实现全光交换的核心器件,光开关的研究已成为全光通信领域研究的焦点.本文首先对光开关的原理进行归纳,总结光开关的应用范围.对传统机械式光开关、微电子机械式光开关、热光开关进行了进一步地划分,分析了它们的结构形式和性能特点.设计了光开关性能评价指标体系,对常见的4种光开关进行了定性与定量对比,指出不同类型光开关的优点和不足之处.最后依据全光通信网的发展趋势,指出大容童、高速、透明、低损耗是光开关的重点发展方向.

  20. Expanding proteomics into the analysis of chiral drugs.

    Science.gov (United States)

    Sui, Jianjun; Zhang, Jianhua; Ching, Chi Bun; Chen, Wei Ning

    2009-06-01

    The chiralities of chiral drugs have been investigated extensively with the purpose of enlightening the role of chirality in drug action. Proteomics, though in its infancy, has recently emerged as the foremost technology in drug development research, possessing the advantage of providing more useful information about an organism than genomics, as it directly addresses the level of genome products and their interactions. In this review, we will discuss the background of chiral drug investigation from which contemporary drug chirality research has emerged, the techniques involved in proteomics technology, the application of proteomics in this exciting area, and the perspectives in future applications of this field.

  1. Proteomic Investigations into Hemodialysis Therapy

    Directory of Open Access Journals (Sweden)

    Mario Bonomini

    2015-12-01

    Full Text Available The retention of a number of solutes that may cause adverse biochemical/biological effects, called uremic toxins, characterizes uremic syndrome. Uremia therapy is based on renal replacement therapy, hemodialysis being the most commonly used modality. The membrane contained in the hemodialyzer represents the ultimate determinant of the success and quality of hemodialysis therapy. Membrane’s performance can be evaluated in terms of removal efficiency for unwanted solutes and excess fluid, and minimization of negative interactions between the membrane material and blood components that define the membrane’s bio(incompatibility. Given the high concentration of plasma proteins and the complexity of structural functional relationships of this class of molecules, the performance of a membrane is highly influenced by its interaction with the plasma protein repertoire. Proteomic investigations have been increasingly applied to describe the protein uremic milieu, to compare the blood purification efficiency of different dialyzer membranes or different extracorporeal techniques, and to evaluate the adsorption of plasma proteins onto hemodialysis membranes. In this article, we aim to highlight investigations in the hemodialysis setting making use of recent developments in proteomic technologies. Examples are presented of why proteomics may be helpful to nephrology and may possibly affect future directions in renal research.

  2. Reconciling proteomics with next generation sequencing

    NARCIS (Netherlands)

    Low, Teck Yew; Heck, Albert Jr

    2015-01-01

    Both genomics and proteomics technologies have matured in the last decade to a level where they are able to deliver system-wide data on the qualitative and quantitative abundance of their respective molecular entities, that is DNA/RNA and proteins. A next logical step is the collective use of these

  3. Human maternal plasma proteomic changes with parturition

    Directory of Open Access Journals (Sweden)

    Robert J. Phillips

    2014-12-01

    Significance: Proteomic technology is constantly advancing, and the latest techniques enable gel-free analysis of minimally preprocessed, complex biological samples, enabling simultaneous identification and quantification of many hundreds of proteins. The technique of TMT labelling and Orbitrap mass spectrometry is applicable to the analysis of serial maternal plasma samples in order to identify potential markers of the onset of labour.

  4. Overview of chemical genomics and proteomics.

    Science.gov (United States)

    Zanders, Edward D

    2012-01-01

    Chemical genetics, genomics, and proteomics have been in existence as distinct offshoots of chemical biology for about 20 years. This review provides a brief definition of each, followed by some examples of how each technology is being used to advance basic research and drug discovery.

  5. Participant recruitment and motivation for participation in optical technology for cervical cancer screening research trials.

    Science.gov (United States)

    Shuhatovich, Olga M; Sharman, Mathilde P; Mirabal, Yvette N; Earle, Nan R; Follen, Michele; Basen-Engquist, Karen

    2005-12-01

    In order to improve recruitment for cervical cancer screening trials, it is necessary to analyze the effectiveness of recruitment strategies used in current trials. A trial to test optical spectroscopy for the diagnosis of cervical neoplasia recruited 1000 women from the community; the trial evaluated the emerging technology against Pap smears and colposcopically directed biopsies for cervical dysplasia. We have examined women's reasons for participating as well as the effectiveness and efficiency for each recruitment strategy. Reasons for participation were identified and compared between trials. The recruitment method that resulted in the most contacts was newspaper reportorial coverage and advertising, followed by family and friends, then television news coverage. The most cost-effective method for finding eligible women who attend the research appointment is word of mouth from a family member or friend. Recommendations are given for maximizing the efficiency of recruitment for cervical cancer screening trials.

  6. Polarization Sensitive Optical Coherence Tomography: A Review of Technology and Applications

    Directory of Open Access Journals (Sweden)

    Bernhard Baumann

    2017-05-01

    Full Text Available Polarization sensitive optical coherence tomography (PS-OCT is an imaging technique based on light scattering. PS-OCT performs rapid two- and three-dimensional imaging of transparent and translucent samples with micrometer scale resolution. PS-OCT provides image contrast based on the polarization state of backscattered light and has been applied in many biomedical fields as well as in non-medical fields. Thereby, the polarimetric approach enabled imaging with enhanced contrast compared to standard OCT and the quantitative assessment of sample polarization properties. In this article, the basic methodological principles, the state of the art of PS-OCT technologies, and important applications of the technique are reviewed in a concise yet comprehensive way.

  7. Refractive index sensitivity enhancement of optical fiber cladding mode by depositing nanofilm via ALD technology.

    Science.gov (United States)

    Zhao, Ying; Pang, Fufei; Dong, Yanhua; Wen, Jianxiang; Chen, Zhenyi; Wang, Tingyun

    2013-11-04

    The atomic layer deposition (ALD) technology is introduced to enhance the sensitivity of optical fiber cladding mode to surrounding refractive index (SRI) variation. The highly uniform Al2O nanofilm was deposited around the double cladding fiber (DCF) which presents cladding mode resonant feature. With the high refractive index coating, the cladding mode resonant spectrum was tuned. And the sensitivity enhancement for SRI sensor was demonstrated. Through adjusting the deposition cycles, a maximum sensitivity of 723 nm/RIU was demonstrated in the DCF with 2500 deposition cycles at the SRI of 1.34. Based on the analysis of cladding modes reorganization, the cladding modes transition of the coated DCF was investigated theoretically. With the high performance nanofilm coating, the proposed SRI sensor is expected to have wide applications in chemical sensors and biosensors.

  8. Evaluation of dry technology for removal of pellicle adhesive residue on advanced optical reticles

    Science.gov (United States)

    Paracha, Shazad; Bekka, Samy; Eynon, Benjamin; Choi, Jaehyuck; Balooch, Mehdi; Varghese, Ivin; Hopkins, Tyler

    2013-09-01

    The fast pace of MOSFET scaling is accelerating the introduction of smaller technology nodes to extend CMOS beyond 20nm as required by Moore's law. To meet these stringent requirements, the industry is seeing an increase in the number of critical layers per reticle set as it move to lower technology nodes especially in a high volume manufacturing operation. These requirements are resulting in reticles with higher feature densities, smaller feature sizes and highly complex Optical Proximity Correction (OPC), built with using new absorber and pellicle materials. These rapid changes are leaving a gap in maintaining these reticles in a fab environment, for not only haze control but also the functionality of the reticle. The industry standard of using wet techniques (which uses aggressive chemicals, like SPM, and SC1) to repel reticles can result in damage to the sub-resolution assist features (SRAF's), create changes to CD uniformity and have potential for creating defects that require other means of removal or repair. Also, these wet cleaning methods in the fab environment can create source for haze growth. Haze can be controlled by: 1) Chemical free (dry) reticle cleaning, 2) In-line reticle inspection in fab, and 3) Manage the environment where reticles are stored. In this paper we will discuss a dry technique (chemical free) to remove pellicle adhesive residue from advanced optical reticles. Samsung Austin Semiconductors (SAS), jointly worked with Eco-Snow System (a division of RAVE N.P., Inc.) to evaluate the use of Dry Reactive Gas (DRG) technique to remove pellicle adhesive residue on reticles. This technique can significantly reduce the impact to the critical geometry in active array of the reticle, resulting in preserving the reticle performance level seen at wafer level. The paper will discuss results on the viability of this technique used on advanced reticles.

  9. An optical fiber Fabry-Perot flow measurement technology based on partial bend structure

    Science.gov (United States)

    Yang, Huijia; Jiang, Junfeng; Zhang, Xuezhi; Pan, Yuheng; Zhu, Wanshan; Zhou, Xiang; Liu, Tiegen

    2016-08-01

    An optical fiber Fabry-Perot (F-P) flow measurement technology is presented, which is based on partial bend structure. A 90° partial bend structure is designed to achieve the non-probe flow measurement with a pressure difference. The fluid simulation results of partial bend structure show that the error of the pressure difference is below 0.05 kPa during steady flow. The optical fiber F-P sensor mounted on the elbow with pressure test accuracy of 1% full scale is used to measure the fluid flow. Flow test results show that when the flow varies from 1 m3/h to 6.5 m3/h at ambient temperature of 25 °C, the response time is 1 s and the flow test accuracy is 4.5% of the F-P flow test system, proving that the F-P flow test method based on partial bend structure can be used in fluid flow measurement.

  10. Determination of inorganic elements in animal feeds by NIRS technology and a fibre-optic probe.

    Science.gov (United States)

    González-Martín, Inmaculada; Alvarez-García, Noelia; González-Pérez, Claudio; Villaescusa-García, Virginia

    2006-05-15

    In the present work we study the use of near infra-red spectroscopy (NIRS) technology together with a remote reflectance fibre-optic probe for the analysis of the mineral composition of animal feeds. The method allows immediate control of the feeds without prior sample treatment or destruction through direct application of the fibre-optic probe on the sample. The regression method employed was modified partial least squares (MPLS). The calibration results obtained using forty samples of animal feeds allowed the determination of Fe, Mn, Ca, Na, K, P, Zn and Cu, with a standard error of prediction (SEP(C)) and a correlation coefficient (RSQ) of 0.129 and 0.859 for Fe; 0.175 and 0.816 for Mn; 5.470 and 0.927 for Ca; 2.717 and 0.862 for Na; 4.397 and 0.891 for K; 2.226 and 0.881 for P; 0.153 and 0.764 for Zn, and 0.095 and 0.918 for Cu, respectively. The robustness of the method was checked by applying it to 10 animal feeds samples of unknown mineral composition in the external validation.

  11. Defect Detection in Pipes using a Mobile Laser-Optics Technology and Digital Geometry

    Directory of Open Access Journals (Sweden)

    Tezerjani Abbasali Dehghan

    2015-01-01

    Full Text Available This paper presents a novel method for defect detection in pipes using a mobile laser-optics technology and conventional digital-geometry-based image processing techniques. The laser-optics consists of a laser that projects a line onto the pipe’s surface, and an omnidirectional camera. It can be mounted on a pipe crawling robot for conducting continuous inspection. The projected laser line will be seen as a half-oval in the image. When the laser line passes over defected points, the image moments on the pixel information would change. We propose a B-spline curve fitting on the digitally-convoluted image and a curvature estimation algorithm to detect the defects from the image. Defect sizes of 2 mm or larger can be detected using this method in pipes of up to 24 inch in diameter. The proposed sensor can detect 180-degree (i.e., upper half surface of the pipe. By turning the sensor 180 degrees, one will be able to detect the other half (i.e., lower half of the pipe’s surface. While, 360-degree laser rings are available commercially, but they did not provide the intensity needed for our experimentation. We also propose a fast boundary extraction algorithm for real time detection of defects, where a trace of consecutive images are used to track the image features. Tests were carried out on PVC and steel pipes.

  12. Near infrared optical technologies to illuminate the status of the neonatal brain.

    Science.gov (United States)

    Liao, Steve M; Culver, Joseph P

    2014-01-01

    The neurodevelopmental outcome of at-risk infants in the neonatal intensive care unit (NICU) is concerning despite steady improvement in the survival rate of these infants. Our current management is often complicated by delayed realization of cerebral deficits due to late manifestation and lack of effective screening tools and neuroimaging/monitoring techniques that are suitable for sick neonates at the bedside. Near infrared specstrocopy (NIRS) is a noninvasive, safe, and portable technique providing a wide range of cerebral hemodynamic contrasts for evaluating the brain. The current state of NIRS technology can be devided into three generations. The first generation represents conventional trend monitoring oximeters that are currently the most widely used in the clinical settings, while the second generation focuses on improving the quantitive accuracy of NIRS measurements by advanced optical techniques. The emergence of diffuse optical imaging (DOI) represents a third generation which opens up more potential clinical applications by providing regional comparisons of brain oximetry and functions either at rest or in response to interventions. Successful integration of NIRS/DOI into the clinical setting requires matching the different capabilities of each instrument to specific clinical goals.

  13. Optics

    CERN Document Server

    Fincham, W H A

    2013-01-01

    Optics: Ninth Edition Optics: Ninth Edition covers the work necessary for the specialization in such subjects as ophthalmic optics, optical instruments and lens design. The text includes topics such as the propagation and behavior of light; reflection and refraction - their laws and how different media affect them; lenses - thick and thin, cylindrical and subcylindrical; photometry; dispersion and color; interference; and polarization. Also included are topics such as diffraction and holography; the limitation of beams in optical systems and its effects; and lens systems. The book is recommen

  14. Technology

    Directory of Open Access Journals (Sweden)

    Xu Jing

    2016-01-01

    Full Text Available The traditional answer card reading method using OMR (Optical Mark Reader, most commonly, OMR special card special use, less versatile, high cost, aiming at the existing problems proposed a method based on pattern recognition of the answer card identification method. Using the method based on Line Segment Detector to detect the tilt of the image, the existence of tilt image rotation correction, and eventually achieve positioning and detection of answers to the answer sheet .Pattern recognition technology for automatic reading, high accuracy, detect faster

  15. Advances and applications of selective reaction monitoring technology in proteomics study%选择性反应监测技术在蛋白质组学研究中的进展及应用

    Institute of Scientific and Technical Information of China (English)

    单亦初; 张丽华; 张玉奎

    2014-01-01

    选择性反应监测(SRM)技术作为一种重要的定向蛋白质分析技术,通过选择性检测特定母离子和子离子来排除非目标组分的干扰,增强了检测灵敏度和定量准确度,具有选择性高、重复性好、灵敏度高、动态范围宽等优点,已被广泛应用于定量蛋白质组学研究,在生命科学领域发挥着至关重要的作用。本文从分析通量、检测灵敏度、定量方法以及相关软件资源4个方面,对近期 SRM 技术的研究进展进行了综述。然后,对 SRM 技术在蛋白质组学研究包括生物标志物验证、蛋白质翻译后修饰研究、生物工程以及信号通路分析等领域中的应用进行了概述。最后,本文对 SRM 技术的应用以及发展前景进行了展望。%As an important technology for targeted protein analysis,selective reaction monito-ring technology(SRM)improves the detection sensitivity and quantification accuracy by elimi-nating the interference of impurities and co-eluting peptides by selective detection of specific mother ions and daughter ions. It has been widely applied to the quantitative proteomics study due to the advantages of high selectivity,excellent reproducibility,high sensitivity and wide dynamic range and plays an important role in the area of life science. For the quantitative analy-sis of the complex samples with wide dynamic range,the throughput of analysis and detection sensitivity still need to be improved. Moreover,various quantification strategies have been pro-posed to improve the accuracy and precision of quantification. Furthermore,data processing becomes more and more important with the application of SRM technology to the analysis of complex samples. In this work,the recent development of SRM technology is reviewed from the above mentioned aspects. Since SRM technology gains wider applications along with the technological development,its applications in the area of proteomics quantitative study

  16. Current advantages in the application of proteomics in inflammatory bowel disease.

    Science.gov (United States)

    Vaiopoulou, Anna; Gazouli, Maria; Theodoropoulos, George; Zografos, George

    2012-11-01

    Since the formulation of the concept of proteomics, a plethora of proteomic technologies have been developed in order to study proteomes. In inflammatory bowel disease (IBD), several studies use proteomics to try to better understand the disease and discover molecules which can be used as biomarkers. Biomarkers should be able to be used for diagnosis, therapy and prognosis. Although several biomarkers have been discovered, few biomarkers have clinical value. In this review, we analyze and report the current use of proteomic techniques to highlight biomarkers characterizing IBD, and different stages of disease activity. We also report the biomarkers and their potential clinical value.

  17. Unraveling pancreatic islet biology by quantitative proteomics

    Energy Technology Data Exchange (ETDEWEB)

    Zhou, Jianying; Dann, Geoffrey P.; Liew, Chong W.; Smith, Richard D.; Kulkarni, Rohit N.; Qian, Weijun

    2011-08-01

    The pancreatic islets of Langerhans play a critical role in maintaining blood glucose homeostasis by secreting insulin and several other important peptide hormones. Impaired insulin secretion due to islet dysfunction is linked to the pathogenesis underlying both Type 1 and Type 2 diabetes. Over the past 5 years, emerging proteomic technologies have been applied to dissect the signaling pathways that regulate islet functions and gain an understanding of the mechanisms of islet dysfunction relevant to diabetes. Herein, we briefly review some of the recent quantitative proteomic studies involving pancreatic islets geared towards gaining a better understanding of islet biology relevant to metabolic diseases.

  18. Application of fluidic lens technology to an adaptive holographic optical element see-through autophoropter

    Science.gov (United States)

    Chancy, Carl H.

    A device for performing an objective eye exam has been developed to automatically determine ophthalmic prescriptions. The closed loop fluidic auto-phoropter has been designed, modeled, fabricated and tested for the automatic measurement and correction of a patient's prescriptions. The adaptive phoropter is designed through the combination of a spherical-powered fluidic lens and two cylindrical fluidic lenses that are orientated 45o relative to each other. In addition, the system incorporates Shack-Hartmann wavefront sensing technology to identify the eye's wavefront error and corresponding prescription. Using the wavefront error information, the fluidic auto-phoropter nulls the eye's lower order wavefront error by applying the appropriate volumes to the fluidic lenses. The combination of the Shack-Hartmann wavefront sensor the fluidic auto-phoropter allows for the identification and control of spherical refractive error, as well as cylinder error and axis; thus, creating a truly automated refractometer and corrective system. The fluidic auto-phoropter is capable of correcting defocus error ranging from -20D to 20D and astigmatism from -10D to 10D. The transmissive see-through design allows for the observation of natural scenes through the system at varying object planes with no additional imaging optics in the patient's line of sight. In this research, two generations of the fluidic auto-phoropter are designed and tested; the first generation uses traditional glass optics for the measurement channel. The second generation of the fluidic auto-phoropter takes advantage of the progress in the development of holographic optical elements (HOEs) to replace all the traditional glass optics. The addition of the HOEs has enabled the development of a more compact, inexpensive and easily reproducible system without compromising its performance. Additionally, the fluidic lenses were tested during a National Aeronautics Space Administration (NASA) parabolic flight campaign, to

  19. Current application of proteomics in biomarker discoveryfor inflammatory bowel disease

    Institute of Scientific and Technical Information of China (English)

    2016-01-01

    Recently, the field of proteomics has rapidly expanded inits application towards clinical research with objectivesranging from elucidating disease pathogenesis todiscovering clinical biomarkers. As proteins governand/or reflect underlying cellular processes, the studyof proteomics provides an attractive avenue for researchas it allows for the rapid identification of proteinprofiles in a biological sample. Inflammatory boweldisease (IBD) encompasses several heterogeneousand chronic conditions of the gastrointestinal tract.Proteomic technology provides a powerful means ofaddressing major challenges in IBD today, especiallyfor identifying biomarkers to improve its diagnosis andmanagement. This review will examine the current stateof IBD proteomics research and its use in biomarkerresearch. Furthermore, we also discuss the challengesof translating proteomic research into clinically relevanttools. The potential application of this growing field isenormous and is likely to provide significant insightstowards improving our future understanding and managementof IBD.

  20. Proteomics and the dynamic plasma membrane

    DEFF Research Database (Denmark)

    Sprenger, Richard R; Jensen, Ole Nørregaard

    2010-01-01

    plasma membrane is of particular interest, by not only serving as a barrier between the "cell interior" and the external environment, but moreover by organizing and clustering essential components to enable dynamic responses to internal and external stimuli. Defining and characterizing the dynamic plasma...... membrane proteome is crucial for understanding fundamental biological processes, disease mechanisms and for finding drug targets. Protein identification, characterization of dynamic PTMs and protein-ligand interactions, and determination of transient changes in protein expression and composition are among...... the challenges in functional proteomic studies of the plasma membrane. We review the recent progress in MS-based plasma membrane proteomics by presenting key examples from eukaryotic systems, including mammals, yeast and plants. We highlight the importance of enrichment and quantification technologies required...

  1. Knowledge Translation: Moving Proteomics Science to Innovation in Society.

    Science.gov (United States)

    Holmes, Christina; McDonald, Fiona; Jones, Mavis; Graham, Janice

    2016-06-01

    Proteomics is one of the pivotal next-generation biotechnologies in the current "postgenomics" era. Little is known about the ways in which innovative proteomics science is navigating the complex socio-political space between laboratory and society. It cannot be assumed that the trajectory between proteomics laboratory and society is linear and unidirectional. Concerned about public accountability and hopes for knowledge-based innovations, funding agencies and citizens increasingly expect that emerging science and technologies, such as proteomics, are effectively translated and disseminated as innovation in society. Here, we describe translation strategies promoted in the knowledge translation (KT) and science communication literatures and examine the use of these strategies within the field of proteomics. Drawing on data generated from qualitative interviews with proteomics scientists and ethnographic observation of international proteomics conferences over a 5-year period, we found that proteomics science incorporates a variety of KT strategies to reach knowledge users outside the field. To attain the full benefit of KT, however, proteomics scientists must challenge their own normative assumptions and approaches to innovation dissemination-beyond the current paradigm relying primarily on publication for one's scientific peers within one's field-and embrace the value of broader (interdisciplinary) KT strategies in promoting the uptake of their research. Notably, the Human Proteome Organization (HUPO) is paying increasing attention to a broader range of KT strategies, including targeted dissemination, integrated KT, and public outreach. We suggest that increasing the variety of KT strategies employed by proteomics scientists is timely and would serve well the omics system sciences community.

  2. Optics

    CERN Document Server

    Fincham, W H A

    2013-01-01

    Optics: Eighth Edition covers the work necessary for the specialization in such subjects as ophthalmic optics, optical instruments and lens design. The text includes topics such as the propagation and behavior of light; reflection and refraction - their laws and how different media affect them; lenses - thick and thin, cylindrical and subcylindrical; photometry; dispersion and color; interference; and polarization. Also included are topics such as diffraction and holography; the limitation of beams in optical systems and its effects; and lens systems. The book is recommended for engineering st

  3. PROTEOMICS in aquaculture: applications and trends.

    Science.gov (United States)

    Rodrigues, Pedro M; Silva, Tomé S; Dias, Jorge; Jessen, Flemming

    2012-07-19

    Over the last forty years global aquaculture presented a growth rate of 6.9% per annum with an amazing production of 52.5 million tonnes in 2008, and a contribution of 43% of aquatic animal food for human consumption. In order to meet the world's health requirements of fish protein, a continuous growth in production is still expected for decades to come. Aquaculture is, though, a very competitive market, and a global awareness regarding the use of scientific knowledge and emerging technologies to obtain a better farmed organism through a sustainable production has enhanced the importance of proteomics in seafood biology research. Proteomics, as a powerful comparative tool, has therefore been increasingly used over the last decade to address different questions in aquaculture, regarding welfare, nutrition, health, quality, and safety. In this paper we will give an overview of these biological questions and the role of proteomics in their investigation, outlining the advantages, disadvantages and future challenges. A brief description of the proteomics technical approaches will be presented. Special focus will be on the latest trends related to the aquaculture production of fish with defined nutritional, health or quality properties for functional foods and the integration of proteomics techniques in addressing this challenging issue.

  4. Proteome studies of bacterial antibiotic resistance mechanisms.

    Science.gov (United States)

    Vranakis, Iosif; Goniotakis, Ioannis; Psaroulaki, Anna; Sandalakis, Vassilios; Tselentis, Yannis; Gevaert, Kris; Tsiotis, Georgios

    2014-01-31

    Ever since antibiotics were used to help humanity battle infectious diseases, microorganisms straight away fought back. Antibiotic resistance mechanisms indeed provide microbes with possibilities to by-pass and survive the action of antibiotic drugs. Several methods have been employed to identify these microbial resistance mechanisms in an ongoing effort to reduce the steadily increasing number of treatment failures due to multi-drug-resistant microbes. Proteomics has evolved to an important tool for this area of research. Following rapid advances in whole genome sequencing, proteomic technologies have been widely used to investigate microbial gene expression. This review highlights the contribution of proteomics in identifying microbial drug resistance mechanisms. It summarizes different proteomic studies on bacteria resistant to different antibiotic drugs. The review further includes an overview of the methodologies used, as well as lists key proteins identified, thus providing the reader not only a summary of research already done, but also directions for future research. This article is part of a Special Issue entitled: Trends in Microbial Proteomics.

  5. Mass spectrometry in food proteomics: a tutorial.

    Science.gov (United States)

    Cunsolo, Vincenzo; Muccilli, Vera; Saletti, Rosaria; Foti, Salvatore

    2014-09-01

    In the last decades, the continuous and rapid evolution of proteomic approaches has provided an efficient platform for the characterization of food-derived proteins. Particularly, the impressive increasing in performance and versatility of the MS instrumentation has contributed to the development of new analytical strategies for proteins, evidencing how MS arguably represents an indispensable tool in food proteomics. Investigation of protein composition in foodstuffs is helpful for understanding the relationship between the protein content and the nutritional and technological properties of foods, the production of methods for food traceability, the assessment of food quality and safety, including the detection of allergens and microbial contaminants in foods, or even the characterization of genetically modified products. Given the high variety of the food-derived proteins and considering their differences in chemical and physical properties, a single proteomic strategy for all purposes does not exist. Rather, proteomic approaches need to be adapted to each analytical problem, and development of new strategies is necessary in order to obtain always the best results. In this tutorial, the most relevant aspects of MS-based methodologies in food proteomics will be examined, and their advantages and drawbacks will be discussed.

  6. Proteomics in medical microbiology.

    Science.gov (United States)

    Cash, P

    2000-04-01

    The techniques of proteomics (high resolution two-dimensional electrophoresis and protein characterisation) are widely used for microbiological research to analyse global protein synthesis as an indicator of gene expression. The rapid progress in microbial proteomics has been achieved through the wide availability of whole genome sequences for a number of bacterial groups. Beyond providing a basic understanding of microbial gene expression, proteomics has also played a role in medical areas of microbiology. Progress has been made in the use of the techniques for investigating the epidemiology and taxonomy of human microbial pathogens, the identification of novel pathogenic mechanisms and the analysis of drug resistance. In each of these areas, proteomics has provided new insights that complement genomic-based investigations. This review describes the current progress in these research fields and highlights some of the technical challenges existing for the application of proteomics in medical microbiology. The latter concern the analysis of genetically heterogeneous bacterial populations and the integration of the proteomic and genomic data for these bacteria. The characterisation of the proteomes of bacterial pathogens growing in their natural hosts remains a future challenge.

  7. Proteomics in pulmonary medicine.

    Science.gov (United States)

    Bowler, Russell P; Ellison, Misoo C; Reisdorph, Nichole

    2006-08-01

    Proteomics is the study of the entire protein complement of the genome (the proteome) in a biological system. Proteomic studies require a multidisciplinary approach and have only been practical with the convergence of technical and methodologic improvements including the following: advances in mass spectrometry and genomic sequencing that now permit the identification and relative quantization of small amounts (femtomole) of nearly any single protein; new methods in gel electrophoresis that allow the detection of subtle changes in protein expression, including posttranslational modifications; automation and miniaturization that permit high-throughput analysis of clinical samples; and new bioinformatics and computational methods that facilitate analysis and interpretation of the abundant data that are generated by proteomics experiments. This convergence makes proteomics studies practical for pulmonary researchers using BAL fluid, lung tissue, blood, and exhaled breath condensates, and will facilitate the research of complex, multifactorial lung diseases such as acute lung injury and COPD. This review describes how proteomics experiments are conducted and interpreted, their limitations, and how proteomics has been used in clinical pulmonary medicine.

  8. Advanced technology optical telescopes IV; Proceedings of the Meeting, Tucson, AZ, Feb. 12-16, 1990. Parts 1 & 2

    Science.gov (United States)

    Barr, Lawrence D. (Editor)

    1990-01-01

    The present conference on the current status of large, advanced-technology optical telescope development and construction projects discusses topics on such factors as their novel optical system designs, the use of phased arrays, seeing and site performance factors, mirror fabrication and testing, pointing and tracking techniques, mirror thermal control, structural design strategies, mirror supports and coatings, and the control of segmented mirrors. Attention is given to the proposed implementation of the VLT Interferometer, the first diffraction-limited astronomical images with adaptive optics, a fiber-optic telescope using a large cross-section image-transmitting bundle, the design of wide-field arrays, Hartmann test data reductions, liquid mirrors, inertial drives for telescope pointing, temperature control of large honeycomb mirrors, evaporative coatings for very large telescope mirrors, and the W. M. Keck telescope's primary mirror active control system software.

  9. Design and Development of the WVU Advanced Technology Satellite for Optical Navigation

    Science.gov (United States)

    Straub, Miranda

    In order to meet the demands of future space missions, it is beneficial for spacecraft to have the capability to support autonomous navigation. This is true for both crewed and uncrewed vehicles. For crewed vehicles, autonomous navigation would allow the crew to safely navigate home in the event of a communication system failure. For uncrewed missions, autonomous navigation reduces the demand on ground-based infrastructure and could allow for more flexible operation. One promising technique for achieving these goals is through optical navigation. To this end, the present work considers how camera images of the Earth's surface could enable autonomous navigation of a satellite in low Earth orbit. Specifically, this study will investigate the use of coastlines and other natural land-water boundaries for navigation. Observed coastlines can be matched to a pre-existing coastline database in order to determine the location of the spacecraft. This paper examines how such measurements may be processed in an on-board extended Kalman filter (EKF) to provide completely autonomous estimates of the spacecraft state throughout the duration of the mission. In addition, future work includes implementing this work on a CubeSat mission within the WVU Applied Space Exploration Lab (ASEL). The mission titled WVU Advanced Technology Satellite for Optical Navigation (WATSON) will provide students with an opportunity to experience the life cycle of a spacecraft from design through operation while hopefully meeting the primary and secondary goals defined for mission success. The spacecraft design process, although simplified by CubeSat standards, will be discussed in this thesis as well as the current results of laboratory testing with the CubeSat model in the ASEL.

  10. Cost-effective backhaul design using hybrid radio/free-space optical technology

    KAUST Repository

    Douik, Ahmed S.

    2015-06-08

    The deluge of date rate in today\\'s networks poses a cost burden on the backhaul network design. Developing cost efficient backhaul solutions becomes an interesting, yet challenging, problem. Traditional technologies for backhaul networks include either radio-frequency backhauls (RF) or optical fibres (OF). While RF is a cost-effective solution as compared to OF, it supports lower data rate requirements. Another promising backhaul solution that may combine both a high data rate and a relatively low cost is the free-space optics (FSO). FSO, however, is sensitive to nature conditions (e.g., rain, fog, line-ofsight, etc.). A more reliable alternative is, therefore, to combine RF and FSO solutions through a hybrid structure called hybrid RF/FSO. Consider a backhaul network, where the base-stations (BS) can be connected to each other either via OF or hybrid RF/FSO backhaul links. The paper addresses the problem of minimizing the cost of backhaul planning under connectivity and data rates constraints, so as to choose the appropriate costeffective backhaul type between BSs (i.e., either OF or hybrid RF/FSO). The paper solves the problem using graph theory techniques by introducing the corresponding planning graph. It shows that under a specified realistic assumption about the cost of OF and hybrid RF/FSO links, the problem is equivalent to a maximum weight clique problem, which can be solved with moderate complexity. Simulation results show that our proposed solution shows a close-to-optimal performance, especially for practical prices of the hybrid RF/FSO.

  11. Introduction of fibre-optic technology in an opencast lignite mine; Einfuehrung von LWL-Technik in einem Braunkohlentagebau

    Energy Technology Data Exchange (ETDEWEB)

    Paus, K.H. [RWE Power AG, Ressort Braunkohlenbergbau/Veredlung, Technikzentrum Tagebaue/HW, Elektrotechnik und technische Vergabe PDV, Kommunikationsanlagen (PBZ-KK), Frechen (Germany); Hehlert, H.A. [RWE Power AG, Ressort Braunkohlenbergbau/Veredlung, Technikzentrum Tagebaue/HW, Elektrotechnik und technische Vergabe Foerderanlagen (PBZ-KP), Frechen (Germany); Andres, M. [RWE Power AG, Ressort Braunkohlenbergbau/Veredlung, Tagebau Hambach, Infrastruktur Prozessdatenverarbeitung (PBH-IP), Niederzier (Germany)

    2006-06-15

    The introduction of fibre-optic technology for the communications infrastructure in our opencast mines entailed the envisaged improvements in automation and operations management. A motivated project team prepared to face new technologies, adopt and use them in day-to-day operations and optimize them has helped sensitive fibre-optic technology to stand the 'acid test' of opencast mine operations. The concepts and operating equipment developed within the scope of the pilot project in the Hambach mine have meanwhile become a standard applied in all RWE Power mines. The whole Garzweiler II mine, for example, has been erected on the basis of these standards. And the upcoming new installation of the belt conveyors in the Inden II mine will be executed in line with these standards as well. (orig.)

  12. Research on the surveillance technology and the comprehensive management network system using the optical fiber about a road management system

    Science.gov (United States)

    Nakano, Masahiro; Okuno, Masatomi; Sasaki, Susumu; Yano, Koji

    2005-05-01

    In recent years, IT (Information Technology) has been utilized in various fields of civil engineering. Especially, trials have been made to utilize optical fibers as sensors to measure strain of civil engineering structures, ground deformation, temperature, etc., and they have been installed for measuring in road structures and civil engineering structures including tunnel, river, and cut-slope structures. In order to make such optical monitoring systems of civil engineering structures more general and organic systems, it would be effective to combine them with such comprehensive systems as ITS. We investigate checking systems utilizing GIS technology, etc. that can process and analyze an enormous amount of data in real time and also investigate the construction of general monitoring systems of road facilities which can perform thorough management from monitoring to maintenance utilizing information technology networks.

  13. A novel approach to smart grid technology for electrical power transmission lines by a self-organized optical network node based on optical bistability

    Science.gov (United States)

    Nakanishi, Soichiro; Sasaki, Wakao

    2011-01-01

    In this work, we have demonstrated a new smart grid model by our novel green photonics technology based on selforganized optical networks realizing an autonomous peer-to-peer electric power transmissions without centralized control for the power grid. In this optical network, we introduced an adaptive algorithm for concurrent peer-to-peer communications, by utilizing optical nonlinearity depending only on the signal strength passing through the network. This method is applicable for autonomous organization of functions for ad-hoc electric power distribution systems for the power grid. For this purpose, a simple optical- electrical hybrid bistable circuit composed of such as light emitting diode (LED) and photo diode (PD), has been incorporated into the network node. In the experiment, the method uses a simple, local adaptation of transmission weights at each network node, which enables self-organizing functions of the network, such as self-routing, self-optimization, self-recovery and self-protection. Based on this method, we have demonstrated experimentally a new smart grid model applicable for ad-hoc electric power distribution systems mediated by power comsumptions. In this model, electric power flow is controlled autonomously through the self-organized network nodes associated with individual power facilities having photovoltaics and electric storage devices, etc., and the nodes convert the amounts of electric power supply and/or comsumption to the light intensity values using above mentioned transmission weights at each node. As a consequence, we have experimentally demonstrated a simple shorthaul system model for ad-hoc electric power distribution with a self-organized optical network as a novel green photonics technology application for smart grid.

  14. The path to clinical proteomics research: integration of proteomics, genomics, clinical laboratory and regulatory science.

    Science.gov (United States)

    Boja, Emily S; Rodriguez, Henry

    2011-04-01

    Better biomarkers are urgently needed to cancer detection, diagnosis, and prognosis. While the genomics community is making significant advances in understanding the molecular basis of disease, proteomics will delineate the functional units of a cell, proteins and their intricate interaction network and signaling pathways for the underlying disease. Great progress has been made to characterize thousands of proteins qualitatively and quantitatively in complex biological systems by utilizing multi-dimensional sample fractionation strategies, mass spectrometry and protein microarrays. Comparative/quantitative analysis of high-quality clinical biospecimen (e.g., tissue and biofluids) of human cancer proteome landscape has the potential to reveal protein/peptide biomarkers responsible for this disease by means of their altered levels of expression, post-translational modifications as well as different forms of protein variants. Despite technological advances in proteomics, major hurdles still exist in every step of the biomarker development pipeline. The National Cancer Institute's Clinical Proteomic Technologies for Cancer initiative (NCI-CPTC) has taken a critical step to close the gap between biomarker discovery and qualification by introducing a pre-clinical "verification" stage in the pipeline, partnering with clinical laboratory organizations to develop and implement common standards, and developing regulatory science documents with the US Food and Drug Administration to educate the proteomics community on analytical evaluation requirements for multiplex assays in order to ensure the safety and effectiveness of these tests for their intended use.

  15. Application of Proteomics in the Study of Tumor Metastasis

    Institute of Scientific and Technical Information of China (English)

    Zhen Cai; Jen-Fu Chiu; Qing-Yu He

    2004-01-01

    Tumor metastasis is the dominant cause of death in cancer patients. However, the molecular and cellular mechanisms underlying tumor metastasis are still elusive.The identification of protein molecules with their expressions correlated to the metastatic process would help to understand the metastatic mechanisms and thus facilitate the development of strategies for the therapeutic interventions and clinical management of cancer. Proteomics is a systematic research approach aiming to provide the global characterization of protein expression and function under given conditions. Proteomic technology has been widely used in biomarker discovery and pathogenetic studies including tumor metastasis. This article provides a brief review of the application of proteomics in identifying molecular factors in tumor metastasis process. The combination of proteomics with other experimental approaches in biochemistry, cell biology, molecular genetics and chemistry, together with the development of new technologies and improvements in existing method ologies will continue to extend its application in studying cancer metastasis.

  16. Linear and nonlinear optics of pyronin Y/flexible polymer substrate for flexible organic technology: New optical approach

    Science.gov (United States)

    Yahia, I. S.; Zahran, H. Y.; Alamri, F. H.

    2017-10-01

    Pyronin Y (PY) thin films of different thicknesses were deposited on a flexible polyacetate substrate by using the spin-coating method. Pyronin Y thin films have an amorphous structure as identified by X-ray diffraction method. The linear and nonlinear optical properties of PY thin films were studied in details as a function of wavelengths. Transmittance, absorbance and reflectance spectra of pyronin Y thin films were recorded in the wavelengths range from 300 to 2500 nm. The refractive and absorption indices have been computed from Fresnel's equation. The optical band gaps were calculated for the studied PY thin film of thicknesses 205, 140 and 95 nm. Both direct and indirect gaps were computed as a function of PY of different thicknesses. The dielectric constant, dielectric loss and dissipation factor were investigated for the studied material. Spectrophotometric data was used to determine the nonlinear refractive index and the third nonlinear optical susceptibility. Pyronin Y thin films/polymer flexible substrate can be used in many applications such as flexible optoelectronic/electronic devices and for nonlinear optics with specified band gap.

  17. Nanomechanical recognition of prognostic biomarker suPAR with DVD-ROM optical technology

    Science.gov (United States)

    Bache, Michael; Bosco, Filippo G.; Brøgger, Anna L.; Frøhling, Kasper B.; Sonne Alstrøm, Tommy; Hwu, En-Te; Chen, Ching-Hsiu; Eugen-Olsen, Jesper; Hwang, Ing-Shouh; Boisen, Anja

    2013-11-01

    In this work the use of a high-throughput nanomechanical detection system based on a DVD-ROM optical drive and cantilever sensors is presented for the detection of urokinase plasminogen activator receptor inflammatory biomarker (uPAR). Several large scale studies have linked elevated levels of soluble uPAR (suPAR) to infectious diseases, such as HIV, and certain types of cancer. Using hundreds of cantilevers and a DVD-based platform, cantilever deflection response from antibody-antigen recognition is investigated as a function of suPAR concentration. The goal is to provide a cheap and portable detection platform which can carry valuable prognostic information. In order to optimize the cantilever response the antibody immobilization and unspecific binding are initially characterized using quartz crystal microbalance technology. Also, the choice of antibody is explored in order to generate the largest surface stress on the cantilevers, thus increasing the signal. Using optimized experimental conditions the lowest detectable suPAR concentration is currently around 5 nM. The results reveal promising research strategies for the implementation of specific biochemical assays in a portable and high-throughput microsensor-based detection platform.

  18. Optical signal processing for indoor positioning using a-SiCH technology

    Science.gov (United States)

    Vieira, M. A.; Vieira, M.; Louro, P.; Silva, V.

    2016-05-01

    In this paper, we use the nonlinear property of SiC multilayer devices under UV irradiation to design an optical processor for indoor positioning. The transducer combines the simultaneous demultiplexing operation with the photodetection and self-amplification. The proposed coding is based on SiC technology. Based on that, we present a way to achieve indoor localization using the parity bits and a navigation syndrome. A representation with a 4 bit original string colour message and the transmitted 7 bit string, the encoding and decoding accurate positional information processes and the design of SiC navigation syndrome generators are discussed and tested. A visible multilateration method estimates the position of the device by using the decoded information received from several, non-collinear transmitters. The location and motion information is found by mapping position and estimates the location areas. Since the indoor position of the LED light source is known from building floor plans and lighting plans, the corresponding indoor position and travel direction of a mobile device can be determined.

  19. Optical signal processing for indoor positioning using a-SiCH technology

    Science.gov (United States)

    Vieira, Manuel A.; Vieira, Manuela; Louro, Paula; Silva, Vitor; Vieira, Pedro

    2016-10-01

    We use the nonlinear property of silicon carbon (SiC) multilayer devices under UV irradiation to design an optical processor for indoor positioning. The transducer combines the simultaneous demultiplexing operation with photodetection and self-amplification. The proposed coding is based on SiC technology. Based on that, we present a way to achieve indoor localization using the parity bits and a navigation syndrome. A representation with a 4-bit original string color message and the transmitted 7-bit string, the encoding and decoding of accurate positional information processes, and the design of SiC navigation syndrome generators are discussed and tested. A visible multilateration method estimates the position of the device using the decoded information received from several noncollinear transmitters. The location and motion information is found by mapping position and estimates the location areas. Since the indoor position of the light-emitting diode light source is known from building floor plans and lighting plans, the corresponding indoor position and travel direction of a mobile device can be determined.

  20. High Sensitivity Refractometer Based on TiO₂-Coated Adiabatic Tapered Optical Fiber via ALD Technology.

    Science.gov (United States)

    Zhu, Shan; Pang, Fufei; Huang, Sujuan; Zou, Fang; Guo, Qiang; Wen, Jianxiang; Wang, Tingyun

    2016-08-15

    Atomic layer deposition (ALD) technology is introduced to fabricate a high sensitivity refractometer based on an adiabatic tapered optical fiber. Different thicknesses of titanium dioxide (TiO₂) nanofilm were coated around the tapered fiber precisely and uniformly under different deposition cycles. Attributed to the higher refractive index of the TiO₂ nanofilm compared to that of silica, an asymmetric Fabry-Perot (F-P) resonator could be constructed along the fiber taper. The central wavelength of the F-P resonator could be controlled by adjusting the thickness of the TiO₂ nanofilm. Such a F-P resonator is sensitive to changes in the surrounding refractive index (SRI), which is utilized to realize a high sensitivity refractometer. The refractometer developed by depositing 50.9-nm-thickness TiO₂ on the tapered fiber shows SRI sensitivity as high as 7096 nm/RIU in the SRI range of 1.3373-1.3500. Due to TiO₂'s advantages of high refractive index, lack of toxicity, and good biocompatibility, this refractometer is expected to have wide applications in the biochemical sensing field.

  1. ECOAL Project—Delivering Solutions for Integrated Monitoring of Coal-Related Fires Supported on Optical Fiber Sensing Technology

    Directory of Open Access Journals (Sweden)

    Joana Ribeiro

    2017-09-01

    Full Text Available The combustion of coal wastes resulting from mining is of particular environmental concern, and the importance of proper management involving real-time assessment of their status and identification of probable evolution scenarios is recognized. Continuous monitoring of the combustion temperature and emission levels of certain gases allows for the possibility of planning corrective actions to minimize their negative impact on the surroundings. Optical fiber technology is well suited to this purpose and here we describe the main attributes and results obtained from a fiber optic sensing system projected to gather data on distributed temperature and gas emissions in these harsh environments.

  2. Proteomics Research in Schizophrenia

    OpenAIRE

    2016-01-01

    Despite intense scientific efforts, the neuropathology and pathophysiology of schizophrenia are poorly understood. Proteomic studies, by testing large numbers of proteins for associations with disease, may contribute to the understanding of the molecular mechanisms of schizophrenia. They may also indicate the types and locations of cells most likely to harbor pathological alterations. Investigations using proteomic approaches have already provided much information on quantitative and qualitat...

  3. Cell Wall Proteome

    OpenAIRE

    Boudart, Georges; Minic, Zoran; Albenne, Cécile; Canut, Hervé; Jamet, Elisabeth; Pont-Lezica, Rafael F

    2007-01-01

    In this chapter, we will focus on the contribution of proteomics to the identification and determination of the structure and function of CWPs as well as discussing new perspectives in this area. The great variety of proteins found in the plant cell wall is described. Some families, such as glycoside hydrolases, proteases, lectins, and inhibitors of cell wall modifying enzymes, are discussed in detail. Examples of the use of proteomic techniques to elucidate the structure of various cell wall...

  4. Is Optical Gas Imaging Effective for Detecting Fugitive Methane Emissions? - A Technological and Policy Perspective

    Science.gov (United States)

    Ravikumar, A. P.; Wang, J.; Brandt, A. R.

    2016-12-01

    Mitigating fugitive methane emissions from the oil and gas industry has become an important concern for both businesses and regulators. While recent studies have improved our understanding of emissions from all sectors of the natural gas supply chain, cost-effectively identifying leaks over expansive natural gas infrastructure remains a significant challenge. Recently, the Environmental Protection Agency (EPA) has recommended the use of optical gas imaging (OGI) technologies to be used in industry-wide leak detection and repair (LDAR) programs. However, there has been little to no systematic study of the effectiveness of infrared-camera-based OGI technology for leak detection applications. Here, we develop a physics-based model that simulates a passive infrared camera imaging a methane leak against varying background and ambient conditions. We verify the simulation tool through a series of large-volume controlled release field experiments wherein known quantities of methane were released and imaged from a range of distances. After simulator verification, we analyze the effects of environmental conditions like temperature, wind, and imaging background on the amount of methane detected from a statistically representative survey program. We also examine the effects of LDAR design parameters like imaging distance, leak size distribution, and gas composition. We show that imaging distance strongly affects leak detection - EPA's expectation of a 60% reduction in fugitive emissions based on a semi-annual LDAR survey will be realized only if leaks are imaged at a distance less than 10 m from the source under ideal environmental conditions. Local wind speed is also shown to be important. We show that minimum detection limits are 3 to 4 times higher for wet-gas compositions that contain a significant fraction of ethane and propane, resulting a significantly large leakage rate. We also explore the importance of `super-emitters' on the performance of an OGI-based leak

  5. Proteomic profiling of animal models mimicking skeletal muscle disorders

    OpenAIRE

    Doran, Philip; Gannon, Joan; O'Connell, Kathleen; Ohlendieck, Kay

    2007-01-01

    Over the last few decades of biomedical research, animal models of neuromuscular diseases have been widely used for determining pathological mechanisms and for testing new therapeutic strategies. With the emergence of high-throughput proteomics technology, the identification of novel protein factors involved in disease processes has been decisively improved. This review outlines the usefulness of the proteomic profiling of animal disease models for the discovery of new reliable biomarkers, fo...

  6. PRIME-XS, a European infrastructure for proteomics.

    Science.gov (United States)

    Raijmakers, Reinout; Olsen, Jesper V; Aebersold, Ruedi; Heck, Albert J R

    2014-08-01

    The PRIME-XS consortium is a pan-European infrastructure for proteomics. As a prologue to this special issue of Molecular & Cellular Proteomics on the research activities of the PRIME-XS consortium, we, as the guest editors of this issue, provide an overview of the structure and activities of this consortium, which is funded by the European Union's 7th Framework Programme for Research and Technological Development.

  7. Optical communications and a comparison of optical technologies for a high data rate return link from Mars

    Science.gov (United States)

    Spence, Rodney L.

    1993-01-01

    The important principles of direct- and heterodyne-detection optical free-space communications are reviewed. Signal-to-noise-ratio (SNR) and bit-error-rate (BER) expressions are derived for both the direct-detection and heterodyne-detection optical receivers. For the heterodyne system, performance degradation resulting from received-signal and local oscillator-beam misalignment and laser phase noise is analyzed. Determination of interfering background power from local and extended background sources is discussed. The BER performance of direct- and heterodyne-detection optical links in the presence of Rayleigh-distributed random pointing and tracking errors is described. Finally, several optical systems employing Nd:YAG, GaAs, and CO2 laser sources are evaluated and compared to assess their feasibility in providing high-data-rate (10- to 1000-Mbps) Mars-to-Earth communications. It is shown that the root mean square (rms) pointing and tracking accuracy is a critical factor in defining the system transmitting laser-power requirements and telescope size and that, for a given rms error, there is an optimum telescope aperture size that minimizes the required power. The results of the analysis conducted indicate that, barring the achievement of extremely small rms pointing and tracking errors (less than 0.2 microrad), the two most promising types of optical systems are those that use an Nd:YAG laser (lambda = 1.064 microns) and high-order pulse position modulator (PPM) and direct detection, and those that use a CO2 laser (lambda = 10.6 microns) and phase shifting keying homodyne modulation and coherent detection. For example, for a PPM order of M = 64 and an rms pointing accuracy of 0.4 microrad, an Nd:YAG system can be used to implement a 100-Mbps Mars link with a 40-cm transmitting telescope, a 20-W laser, and a 10-m receiving photon bucket. Under the same conditions, a CO2 system would require 3-m transmitting and receiving telescopes and a 32-W laser to implement such

  8. Technology Development for the Advanced Technology Large Aperture Space Telescope (ATLAST) as a Candidate Large UV-Optical-Infrared (LUVOIR) Surveyor

    Science.gov (United States)

    Bolcar, Matthew R.; Balasubramanian, Kunjithapatha; Clampin, Mark; Crooke, Julie; Feinberg, Lee; Postman, Marc; Quijada, Manuel; Rauscher, Bernard; Redding, David; Rioux, Norman; Shaklan, Stuart; Stahl, H. Philip; Stahle, Carl; Thronson, Harley

    2015-01-01

    The Advanced Technology Large Aperture Space Telescope (ATLAST) team has identified five key technologies to enable candidate architectures for the future large-aperture ultraviolet/optical/infrared (LUVOIR) space observatory envisioned by the NASA Astrophysics 30-year roadmap, Enduring Quests, Daring Visions. The science goals of ATLAST address a broad range of astrophysical questions from early galaxy and star formation to the processes that contributed to the formation of life on Earth, combining general astrophysics with direct-imaging and spectroscopy of habitable exoplanets. The key technologies are: internal coronagraphs, starshades (or external occulters), ultra-stable large-aperture telescopes, detectors, and mirror coatings. Selected technology performance goals include: 1x10?10 raw contrast at an inner working angle of 35 milli-arcseconds, wavefront error stability on the order of 10 pm RMS per wavefront control step, autonomous on-board sensing & control, and zero-read-noise single-photon detectors spanning the exoplanet science bandpass between 400 nm and 1.8 µm. Development of these technologies will provide significant advances over current and planned observatories in terms of sensitivity, angular resolution, stability, and high-contrast imaging. The science goals of ATLAST are presented and flowed down to top-level telescope and instrument performance requirements in the context of a reference architecture: a 10-meter-class, segmented aperture telescope operating at room temperature (290 K) at the sun-Earth Lagrange-2 point. For each technology area, we define best estimates of required capabilities, current state-of-the-art performance, and current Technology Readiness Level (TRL) - thus identifying the current technology gap. We report on current, planned, or recommended efforts to develop each technology to TRL 5.

  9. Connecting Genomic Alterations to Cancer Biology with Proteomics: The NCI Clinical Proteomic Tumor Analysis Consortium

    Energy Technology Data Exchange (ETDEWEB)

    Ellis, Matthew; Gillette, Michael; Carr, Steven A.; Paulovich, Amanda G.; Smith, Richard D.; Rodland, Karin D.; Townsend, Reid; Kinsinger, Christopher; Mesri, Mehdi; Rodriguez, Henry; Liebler, Daniel

    2013-10-03

    The National Cancer Institute (NCI) Clinical Proteomic Tumor Analysis Consortium is applying the latest generation of proteomic technologies to genomically annotated tumors from The Cancer Genome Atlas (TCGA) program, a joint initiative of the NCI and the National Human Genome Research Institute. By providing a fully integrated accounting of DNA, RNA, and protein abnormalities in individual tumors, these datasets will illuminate the complex relationship between genomic abnormalities and cancer phenotypes, thus producing biologic insights as well as a wave of novel candidate biomarkers and therapeutic targets amenable to verifi cation using targeted mass spectrometry methods.

  10. Integration of gel-based and gel-free proteomic data for functional analysis of proteins through Soybean Proteome Database

    KAUST Repository

    Komatsu, Setsuko

    2017-05-10

    The Soybean Proteome Database (SPD) stores data on soybean proteins obtained with gel-based and gel-free proteomic techniques. The database was constructed to provide information on proteins for functional analyses. The majority of the data is focused on soybean (Glycine max ‘Enrei’). The growth and yield of soybean are strongly affected by environmental stresses such as flooding. The database was originally constructed using data on soybean proteins separated by two-dimensional polyacrylamide gel electrophoresis, which is a gel-based proteomic technique. Since 2015, the database has been expanded to incorporate data obtained by label-free mass spectrometry-based quantitative proteomics, which is a gel-free proteomic technique. Here, the portions of the database consisting of gel-free proteomic data are described. The gel-free proteomic database contains 39,212 proteins identified in 63 sample sets, such as temporal and organ-specific samples of soybean plants grown under flooding stress or non-stressed conditions. In addition, data on organellar proteins identified in mitochondria, nuclei, and endoplasmic reticulum are stored. Furthermore, the database integrates multiple omics data such as genomics, transcriptomics, metabolomics, and proteomics. The SPD database is accessible at http://proteome.dc.affrc.go.jp/Soybean/. Biological significanceThe Soybean Proteome Database stores data obtained from both gel-based and gel-free proteomic techniques. The gel-free proteomic database comprises 39,212 proteins identified in 63 sample sets, such as different organs of soybean plants grown under flooding stress or non-stressed conditions in a time-dependent manner. In addition, organellar proteins identified in mitochondria, nuclei, and endoplasmic reticulum are stored in the gel-free proteomics database. A total of 44,704 proteins, including 5490 proteins identified using a gel-based proteomic technique, are stored in the SPD. It accounts for approximately 80% of all

  11. Integration of gel-based and gel-free proteomic data for functional analysis of proteins through Soybean Proteome Database.

    Science.gov (United States)

    Komatsu, Setsuko; Wang, Xin; Yin, Xiaojian; Nanjo, Yohei; Ohyanagi, Hajime; Sakata, Katsumi

    2017-06-23

    The Soybean Proteome Database (SPD) stores data on soybean proteins obtained with gel-based and gel-free proteomic techniques. The database was constructed to provide information on proteins for functional analyses. The majority of the data is focused on soybean (Glycine max 'Enrei'). The growth and yield of soybean are strongly affected by environmental stresses such as flooding. The database was originally constructed using data on soybean proteins separated by two-dimensional polyacrylamide gel electrophoresis, which is a gel-based proteomic technique. Since 2015, the database has been expanded to incorporate data obtained by label-free mass spectrometry-based quantitative proteomics, which is a gel-free proteomic technique. Here, the portions of the database consisting of gel-free proteomic data are described. The gel-free proteomic database contains 39,212 proteins identified in 63 sample sets, such as temporal and organ-specific samples of soybean plants grown under flooding stress or non-stressed conditions. In addition, data on organellar proteins identified in mitochondria, nuclei, and endoplasmic reticulum are stored. Furthermore, the database integrates multiple omics data such as genomics, transcriptomics, metabolomics, and proteomics. The SPD database is accessible at http://proteome.dc.affrc.go.jp/Soybean/. The Soybean Proteome Database stores data obtained from both gel-based and gel-free proteomic techniques. The gel-free proteomic database comprises 39,212 proteins identified in 63 sample sets, such as different organs of soybean plants grown under flooding stress or non-stressed conditions in a time-dependent manner. In addition, organellar proteins identified in mitochondria, nuclei, and endoplasmic reticulum are stored in the gel-free proteomics database. A total of 44,704 proteins, including 5490 proteins identified using a gel-based proteomic technique, are stored in the SPD. It accounts for approximately 80% of all predicted proteins from

  12. Optical fiber chemical sensors with sol-gel derived nanomaterials for monitoring high temperature/high pressure reactions in clean energy technologies

    Science.gov (United States)

    Tao, Shiquan

    2010-04-01

    The development of sensor technologies for in situ, real time monitoring the high temperature/high pressure (HTP) chemical processes used in clean energy technologies is a tough challenge, due to the HTP, high dust and corrosive chemical environment of the reaction systems. A silica optical fiber is corrosive resistance, and can work in HTP conditions. This paper presents our effort in developing fiber optic sensors for in situ, real time monitoring the concentration of trace ammonia and hydrogen in high temperature gas samples. Preliminary test results illustrate the feasibility of using fiber optic sensor technologies for monitoring HTP processes for next generation energy industry.

  13. Blind Source Separation Model of Earth-Rock Junctions in Dike Engineering Based on Distributed Optical Fiber Sensing Technology

    Directory of Open Access Journals (Sweden)

    Huaizhi Su

    2015-01-01

    Full Text Available Distributed temperature sensing (DTS provides an important technology support for the earth-rock junctions of dike projects (ERJD, which are binding sites between culvert, gates, and pipes and dike body and dike foundation. In this study, a blind source separation model is used for the identification of leakages based on the temperature data of DTS in leakage monitoring of ERJD. First, a denoising method is established based on the temperature monitoring data of distributed optical fiber in ERJD by a wavelet packet signal decomposition technique. The temperature monitoring messages of fibers are combined response for leakages and other factors. Its character of unclear responding mechanism is very obvious. Thus, a blind source separation technology is finally selected. Then, the rule of temperature measurement data for optical fiber is analyzed and its temporal and spatial change process is also discussed. The realization method of the blind source separation model is explored by combining independent component analysis (ICA with principal component analysis (PCA. The practical test result in an example shows that the method could efficiently locate and identify the leakage location of ERJD. This paper is expected to be useful for further scientific research and efficient applications of distributed optical fiber sensing technology.

  14. Optical and millimeter-wave radio seamless MIMO transmission based on a radio over fiber technology.

    Science.gov (United States)

    Kanno, Atsushi; Kuri, Toshiaki; Hosako, Iwao; Kawanishi, Tetsuya; Yoshida, Yuki; Yasumura, Yoshihiro; Kitayama, Ken-ichi

    2012-12-31

    Multi-input multi-output (MIMO) transmission of two millimeter-wave radio signals seamlessly converted from polarization-division-multiplexed quadrature-phase-shift-keying optical signals is successfully demonstrated, where a radio access unit basically consisting of only optical-to-electrical converters and a radio receiver performs total signal equalization of both the optical and the radio paths and demodulation with digital signal processing (DSP). Orthogonally polarized optical components that are directly converted to two-channel radio components can be demultiplexed and demodulated with high-speed DSP as in optical digital coherent detection. 20-Gbaud optical and radio seamless MIMO transmission provides a total capacity of 74.4 Gb/s with a forward error correction overhead of 7%.

  15. Investigating pathogen biology at the level of the proteome.

    Science.gov (United States)

    Cash, Phillip

    2011-08-01

    Bacterial infections are a major cause of morbidity and mortality throughout the world. By extending our understanding of the process of bacterial pathogenesis at the molecular level new strategies for their treatment and prevention can be developed. Proteomic technologies, along with other methods for global gene expression analysis, play an important role in understanding the mechanism(s) of bacterial pathogenesis. This review highlights the use of proteomics to identify protein biomarkers for virulent bacterial isolates and how these biomarkers can be correlated with the outcome of bacterial infection. Biomarker identification typically looks at the proteomes of bacteria grown under laboratory conditions. It is, however, the characterisation of the bacterial proteome during in vivo infection of its host that will eventually provide the most significant insights into bacterial pathogenesis. Although this area of research has significant technical challenges, a number of complementary proteome analytical approaches are being developed to identify and characterise the bacterial genes specifically expressed in vivo. Ultimately, the development of newly targeted therapies and vaccines using specific protein targets identified through proteomic analyses will be one of the major practical benefits arising from the proteomic analysis of bacterial pathogens.

  16. Clinical proteomics: Current status, challenges, and future perspectives

    Directory of Open Access Journals (Sweden)

    Shyh-Horng Chiou

    2011-01-01

    Full Text Available This account will give an overview and evaluation of the current advances in mass spectrometry (MS-based proteomics platforms and technology. A general review of some background information concerning the application of these methods in the characterization of molecular sizes and related protein expression profiles associated with different types of cells under varied experimental conditions will be presented. It is intended to provide a concise and succinct overview to those clinical researchers first exposed to this foremost powerful methodology in modern life sciences of postgenomic era. Proteomic characterization using highly sophisticated and expensive instrumentation of MS has been used to characterize biological samples of complex protein mixtures with vastly different protein structure and composition. These systems are then used to highlight the versatility and potential of the MS-based proteomic strategies for facilitating protein expression analysis of various disease-related organisms or tissues of interest. Major MS-based strategies reviewed herein include (1 matrix-assisted laser desorption ionization-MS and electron-spray ionization proteomics; (2 one-dimensional or two-dimensional gel-based proteomics; (3 gel-free shotgun proteomics in conjunction with liquid chromatography/tandem MS; (4 Multiple reaction monitoring coupled tandem MS quantitative proteomics and; (5 Phosphoproteomics based on immobilized metal affinity chromatography and liquid chromatography-MS/MS.

  17. Power efficient and colorless PON upstream system using asymmetric clipping optical OFDM and TDMA technologies

    Science.gov (United States)

    Zhao, Yuan; Qiao, Yaojun; Ji, Yuefeng

    2012-04-01

    Asymmetric clipping optical orthogonal frequency division multiplexing (ACO-OFDM) based time division multiple access (TDMA) Passive Optical Network (PON) upstream transmission architecture is proposed. The system features low power consumption, colorless, and cost effectiveness. Performance and validity of 10 Gb/s upstream transmission are studied and confirmed by simulation. Performance degradation due to interference from rogue Optical Network Unit (ONU) is also studied.

  18. Environmental proteomics and metallomics.

    Science.gov (United States)

    López-Barea, Juan; Gómez-Ariza, José Luis

    2006-04-01

    Monitoring environmental pollution using biomarkers requires detailed knowledge about the markers, and many only allow a partial assessment of pollution. New proteomic methods (environmental proteomics) can identify proteins that, after validation, might be useful as alternative biomarkers, although this approach also has its limitations, derived mainly from their application to non-model organisms. Initial studies using environmental proteomics were carried out in animals exposed to model pollutants, and led to the concept of protein expression signatures. Experiments have been carried out in model organisms (yeast, Arabidopsis, rat cells, or mice) exposed to model contaminants. Over the last few years, proteomics has been applied to organisms from ecosystems with different pollution levels, forming the basis of an environmental branch in proteomics. Another focus is connected with the presence of metals bound to biomolecules, which adds an additional dimension to metal-biomolecule and metalloprotein characterization - the field of metallomics. The metallomic approach considers the metallome: a whole individual metal or metalloid species within a cell or tissue. A metallomic analytical approach (MAA) is proposed as a new tool to study and identify metalloproteins.

  19. Beer and wort proteomics.

    Science.gov (United States)

    Iimure, Takashi; Kihara, Makoto; Sato, Kazuhiro

    2014-01-01

    Proteome analysis provides a way to identify proteins related to the quality traits of beer. A number of protein species in beer and wort have been identified by two-dimensional gel electrophoresis combined with enzyme digestion such as trypsin, followed by mass spectrometry analyses and/or liquid chromatography mass/mass spectrometry. In addition, low molecular weight polypeptides in beer have been identified by the combination of non-enzyme digestion and mass analyses. These data sets of various molecular weight polypeptides (i.e., proteomes) provide a platform for analyzing protein functions in beer. Several novel proteins related to beer quality traits such as foam stability and haze formation have been identified by analyzing these proteomes. Some of the proteins have been applied to the development of efficient protein or DNA markers for trait selection in malting barley breeding. In this chapter, recent proteome studies of beer and wort are reviewed, and the methods and protocols of beer and wort proteome analysis are described.

  20. Proteomics of Foodborne Bacterial Pathogens

    Science.gov (United States)

    Fagerquist, Clifton K.

    This chapter is intended to be a relatively brief overview of proteomic techniques currently in use for the identification and analysis of microorganisms with a special emphasis on foodborne pathogens. The chapter is organized as follows. First, proteomic techniques are introduced and discussed. Second, proteomic applications are presented specifically as they relate to the identification and qualitative/quantitative analysis of foodborne pathogens.

  1. Global MS-Based Proteomics Drug Profiling.

    Science.gov (United States)

    Carvalho, Ana Sofia; Matthiesen, Rune

    2016-01-01

    DNA-based technologies such as RNAi, chemical-genetic profiling, or gene expression profiling by DNA microarrays combined with other biochemical methods are established strategies for surveying drug mechanisms. Such approaches can provide mechanistic information on how drugs act and affect cellular pathways. By studying how cancer cells compensate for the drug treatment, novel targets used in a combined treatment can be designed. Furthermore, toxicity effects on cells not targeted can be obtained on a molecular level. For example, drug companies are particularly interested in studying the molecular side effects of drugs in the liver. In addition, experiments with the purpose of elucidating liver toxicity can be studied using samples obtained from animal models exposed to different concentrations of a drug over time. More recently considerable advances in mass spectrometry (MS) technologies and bioinformatics tools allows informative global drug profiling experiments to be performed at a cost comparable to other large-scale technologies such as DNA-based technologies. Moreover, MS-based proteomics provides an additional layer of information on the dynamic regulation of proteins translation and particularly protein degradation. MS-based proteomics approaches combined with other biochemical methods delivers information on regulatory networks, signaling cascades, and metabolic pathways upon drug treatment. Furthermore, MS-based proteomics can provide additional information on single amino acid polymorphisms, protein isoform distribution, posttranslational modifications, and subcellular localization. In this chapter, we will share our experience using MS based proteomics as a pharmacoproteomics strategy to characterize drug mechanisms of action in single drug therapy or in multidrug combination. Finally, the emergence of integrated proteogenomics analysis, such as "The Cancer Genome Atlas" program, opened interesting perspectives to extend this approach to drug target

  2. Genomics, proteomics, and genetics of leptospira.

    Science.gov (United States)

    Picardeau, Mathieu

    2015-01-01

    Recent advances in molecular genetics, such as the ability to construct defined mutants, have allowed the study of virulence factors and more generally the biology in Leptospira. However, pathogenic leptospires remain much less easily transformable than the saprophyte L. biflexa and further development and improvement of genetic tools are required. Here, we review tools that have been used to genetically manipulate Leptospira. We also describe the major advances achieved in both genomics and postgenomics technologies, including transcriptomics and proteomics.

  3. Highlights of recent articles on data mining in genomics & proteomics

    Science.gov (United States)

    This editorial elaborates on investigations consisting of different “OMICS” technologies and their application to biological sciences. In addition, advantages and recent development of the proteomic, genomic and data mining technologies are discussed. This information will be useful to scientists ...

  4. Mining the active proteome of Arabidopsis thaliana

    Directory of Open Access Journals (Sweden)

    Renier A. L. Van Der Hoorn

    2011-11-01

    Full Text Available Assigning functions to the >30.000 proteins encoded by the Arabidopsis genome is a challenging task of the Arabidopsis Functional Genomics Network. Although genome-wide technologies like proteomics and transcriptomics have generated a wealth of information that significantly accelerated gene annotation, protein activities are poorly predicted by transcript or protein levels as protein activities are post-translationally regulated. To directly display protein activities in Arabidopsis proteomes, we developed and applied Activity-based Protein Profiling (ABPP. ABPP is based on the use of small molecule probes that react with the catalytic residues of distinct protein classes in an activity-dependent manner. Labeled proteins are separated and detected from proteins gels and purified and identified by mass spectrometry. Using probes of six different chemotypes we have displayed of activities of 76 Arabidopsis proteins. These proteins represent over ten different protein classes that contain over 250 Arabidopsis proteins, including cysteine- serine- and metallo-proteases, lipases, acyltransferases, and the proteasome. We have developed methods for identification of in vivo labeled proteins using click-chemistry and for in vivo imaging with fluorescent probes. In vivo labeling has revealed novel protein activities and unexpected subcellular activities of the proteasome. Labeling of extracts displayed several differential activities e.g. of the proteasome during immune response and methylesterases during infection. These studies illustrate the power of ABPP to display the functional proteome and testify to a successful interdisciplinary collaboration involving chemical biology, organic chemistry and proteomics.

  5. Get smart, go optical: example uses of optical fibre sensing technology for production optimisation and subsea asset monitoring

    Science.gov (United States)

    Staveley, Chris

    2014-06-01

    With the growth in deep-water oil and gas production, condition monitoring of high-value subsea assets to give early warning of developing problems is vital. Offshore operators can then transport and deploy spare parts before a failure occurs, so minimizing equipment down-time, and the significant costs associated with unscheduled maintenance. Results are presented from a suite of tests in which multiple elements of a subsea twin-screw pump and associated electric motor were monitored using a fibre optic sensing system based on fibre Bragg gratings (FBG) that simultaneously measured dynamic strain on the main rotor bearings, pressure and temperature of the lubricating oil, distributed temperature through the motor stator windings and vibration of the pump and motor housings.

  6. Establishing Substantial Equivalence: Proteomics

    Science.gov (United States)

    Lovegrove, Alison; Salt, Louise; Shewry, Peter R.

    Wheat is a major crop in world agriculture and is consumed after processing into a range of food products. It is therefore of great importance to determine the consequences (intended and unintended) of transgenesis in wheat and whether genetically modified lines are substantially equivalent to those produced by conventional plant breeding. Proteomic analysis is one of several approaches which can be used to address these questions. Two-dimensional PAGE (2D PAGE) remains the most widely available method for proteomic analysis, but is notoriously difficult to reproduce between laboratories. We therefore describe methods which have been developed as standard operating procedures in our laboratory to ensure the reproducibility of proteomic analyses of wheat using 2D PAGE analysis of grain proteins.

  7. Proteomics and insect immunity

    Directory of Open Access Journals (Sweden)

    L Shi

    2006-01-01

    Full Text Available Insect innate immunity is both a model for vertebrate immunity as well as a key system that impactsmedically important pathogens that are transmitted by insects. Recent developments in proteomics andprotein identification techniques combined with the completion of genome sequences for Anophelesgambiae and Drosophila melanogaster provided the tools for examining insect immunity at a new level ofmolecular detail. Application of proteomics to insect immunity resulted in predictions of new roles inimmunity for proteins already known in other contexts (e.g. ferritin, transferrin, Chi-lectins and helped totarget specific members of multi-gene families that respond to different pathogens (e.g. serine proteases,thioester proteins. In addition, proteomics studies verify that post-translational modifications play a keyrole in insect immunity since many of the identified proteins are modified in some way. These studiescomplement recent work on insect transcriptomes and provide new directions for further investigation ofinnate immunity.

  8. From protein catalogues towards targeted proteomics approaches in cereal grains

    DEFF Research Database (Denmark)

    Finnie, Christine; Sultan, Abida; Grasser, Klaus D.

    2011-01-01

    Due to their importance for human nutrition, the protein content of cereal grains has been a subject of intense study for over a century and cereal grains were not surprisingly one of the earliest subjects for 2D-gel-based proteome analysis. Over the last two decades, countless cereal grain...... proteomes, mostly derived using 2D-gel based technologies, have been described and hundreds of proteins identified. However, very little is still known about post-translational modifications, subcellular proteomes, and protein–protein interactions in cereal grains. Development of techniques for improved...... of proteins. These “next-generation” proteomics studies will vastly increase our depth of knowledge about the processes controlling cereal grain development, nutritional and processing characteristics....

  9. Network Tools for the Analysis of Proteomic Data.

    Science.gov (United States)

    Chisanga, David; Keerthikumar, Shivakumar; Mathivanan, Suresh; Chilamkurti, Naveen

    2017-01-01

    Recent advancements in high-throughput technologies such as mass spectrometry have led to an increase in the rate at which data is generated and accumulated. As a result, standard statistical methods no longer suffice as a way of analyzing such gigantic amounts of data. Network analysis, the evaluation of how nodes relate to one another, has over the years become an integral tool for analyzing high throughput proteomic data as they provide a structure that helps reduce the complexity of the underlying data.Computational tools, including pathway databases and network building tools, have therefore been developed to store, analyze, interpret, and learn from proteomics data. These tools enable the visualization of proteins as networks of signaling, regulatory, and biochemical interactions. In this chapter, we provide an overview of networks and network theory fundamentals for the analysis of proteomics data. We further provide an overview of interaction databases and network tools which are frequently used for analyzing proteomics data.

  10. A Biologist's Field Guide to Multiplexed Quantitative Proteomics.

    Science.gov (United States)

    Bakalarski, Corey E; Kirkpatrick, Donald S

    2016-05-01

    High-throughput genomic and proteomic studies have generated near-comprehensive catalogs of biological constituents within many model systems. Nevertheless, static catalogs are often insufficient to fully describe the dynamic processes that drive biology. Quantitative proteomic techniques address this need by providing insight into closely related biological states such as the stages of a therapeutic response or cellular differentiation. The maturation of quantitative proteomics in recent years has brought about a variety of technologies, each with their own strengths and weaknesses. It can be difficult for those unfamiliar with this evolving landscape to match the experiment at hand with the best tool for the job. Here, we outline quantitative methods for proteomic mass spectrometry and discuss their benefits and weaknesses from the perspective of the biologist aiming to generate meaningful data and address mechanistic questions. © 2016 by The American Society for Biochemistry and Molecular Biology, Inc.

  11. [Proteomics in infectious diseases].

    Science.gov (United States)

    Quero, Sara; Párraga-Niño, Noemí; García-Núñez, Marian; Sabrià, Miquel

    2016-04-01

    Infectious diseases have a high incidence in the population, causing a major impact on global health. In vitro culture of microorganisms is the first technique applied for infection diagnosis which is laborious and time consuming. In recent decades, efforts have been focused on the applicability of "Omics" sciences, highlighting the progress provided by proteomic techniques in the field of infectious diseases. This review describes the management, processing and analysis of biological samples for proteomic research. Copyright © 2014 Elsevier España, S.L.U. y Sociedad Española de Enfermedades Infecciosas y Microbiología Clínica. All rights reserved.

  12. The Multinational Arabidopsis Steering Subcommittee for Proteomics Assembles the Largest Proteome Database Resource for Plant Systems Biology

    Energy Technology Data Exchange (ETDEWEB)

    Weckwerth, Wolfram; Baginsky, Sacha; Van Wijk, Klass; Heazlewood, Joshua; Millar, Harvey

    2009-12-01

    In the past 10 years, we have witnessed remarkable advances in the field of plant molecular biology. The rapid development of proteomic technologies and the speed with which these techniques have been applied to the field have altered our perception of how we can analyze proteins in complex systems. At nearly the same time, the availability of the complete genome for the model plant Arabidopsis thaliana was released; this effort provides an unsurpassed resource for the identification of proteins when researchers use MS to analyze plant samples. Recognizing the growth in this area, the Multinational Arabidopsis Steering Committee (MASC) established a subcommittee for A. thaliana proteomics in 2006 with the objective of consolidating databases, technique standards, and experimentally validated candidate genes and functions. Since the establishment of the Multinational Arabidopsis Steering Subcommittee for Proteomics (MASCP), many new approaches and resources have become available. Recently, the subcommittee established a webpage to consolidate this information (www.masc-proteomics.org). It includes links to plant proteomic databases, general information about proteomic techniques, meeting information, a summary of proteomic standards, and other relevant resources. Altogether, this website provides a useful resource for the Arabidopsis proteomics community. In the future, the website will host discussions and investigate the cross-linking of databases. The subcommittee members have extensive experience in arabidopsis proteomics and collectively have produced some of the most extensive proteomics data sets for this model plant (Table S1 in the Supporting Information has a list of resources). The largest collection of proteomics data from a single study in A. thaliana was assembled into an accessible database (AtProteome; http://fgcz-atproteome.unizh.ch/index.php) and was recently published by the Baginsky lab.1 The database provides links to major Arabidopsis online

  13. Research on Structural Stress Optical Fiber Testing Technology Based on Brillouin Scattering

    Directory of Open Access Journals (Sweden)

    Wang Xian-Jin

    2016-01-01

    Full Text Available In this paper, the principle of distributed optical fiber measurement and measurement of axial stress is introduced by analyzing the principle of Brillouin scattering in an optical fiber with a certain power. Making the experimental device, measuring the individual strain model, analyzing the wave shape of the scattered wave, and preliminary understanding of the image characteristics of the stress in the optical fiber Brillouin scattering spectrum. The effect of stress on the different position of the fiber, and the difference between them and the scattering waveform obtained from the stress free action poetry are compared, and the effect of the light pulse on the optical fiber transmission is studied. The results show that the effect of the stress is different in the position of the action, and the effect of the propagation of the pulse light is mainly affected by the Stokes and anti Stokes light scattering. The research can provide reference for distributed optical fiber measurement, and it can promote the application of distributed optical fiber in measuring micro deformation. The innovative point of this study is to use the pulley method to solve the effect of the different position of the same stress in the distribution of optical fiber.

  14. Mass spectrometry-based proteomics and analyses of serum: a primer for the clinical investigator.

    Science.gov (United States)

    Fusaro, V A; Stone, J H

    2003-01-01

    The vocabulary of proteomics and the swiftly-developing, technological nature of the field constitute substantial barriers to clinical investigators. In recent years, mass spectrometry has emerged as the most promising technique in this field. The purpose of this review is to introduce the field of mass spectrometry-based proteomics to clinical investigators, to explain many of the relevant terms, to introduce the equipment employed in this field, and to outline approaches to asking clinical questions using a proteomic approach. Examples of clinical applications of proteomic techniques are provided from the fields of cancer and vasculitis research, with an emphasis on a pattern recognition approach.

  15. Moving forward in colorectal cancer research, what proteomics has to tell

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    Colorectal cancer is the third most common cancer and is highly fatal. During the last several years, research has been primarily based on the study of expression profiles using microarray technology. But now, investigators are putting into practice proteomic analyses of cancer tissues and cells to identify new diagnostic or therapeutic biomarkers for this cancer. Because the proteome reflects the state of a cell, tissue or organism more accurately, much is expected from proteomics to yield better tumor markers for disease diagnosis and therapy monitoring. This review summarizes the most relevant applications of proteomics the biomarker discovery for colorectal cancer.

  16. Effective representation and storage of mass spectrometry-based proteomic data sets for the scientific community

    DEFF Research Database (Denmark)

    Olsen, Jesper V; Mann, Matthias

    2011-01-01

    Mass spectrometry-based proteomics has emerged as a technology of choice for global analysis of cell signaling networks. However, reporting and sharing of MS data are often haphazard, limiting the usefulness of proteomics to the signaling community. We argue that raw data should always be provided...... mechanisms for community-wide sharing of these data....

  17. Proteomics and aging : studying the influence of aging on endothelial cells and human plasma

    NARCIS (Netherlands)

    Eman, M.R.

    2007-01-01

    In general, human aging is considered one of the most complex and less-well understood process in biology. In this thesis the possibilities of proteomics technology in the field of aging were explored. The complexity of the aging process was supposed to accompanied by relatively subtle proteome vari

  18. The Progress of Proteomics Technology and Its Application in Lactic Acid Bacteria's Responses to Environmental Stress%蛋白组学技术在乳酸菌环境胁迫应激研究中的应用

    Institute of Scientific and Technical Information of China (English)

    周方方; 吴正钧; 艾连中; 刘振民

    2012-01-01

    文中介绍了蛋白质组学新技术原理及常用技术路线,着重论述了该技术对乳酸菌在各种不同环境胁迫应激研究中的应用,从酸胁迫、冷胁迫、胆盐胁迫、渗透压胁迫及氧化胁迫等方面分别做了应用分析,并对该技术在分子生物学领域尤其是乳酸菌分子生物学研究方面未来的发展做了展望。%The progress of proteomics technology was reviewed in this paper. The application of proteomics tech- nology to analyze the response of lactic acid bacteria to environmental stress was also summarized. The predominant environmental stress factors influencing the physiology of Lactic acid bacteria including acidity stress, cold stress, bile salt stress, osmotic stress and oxidative stress were discussed. Development and future direction were also suggested for proteomics technology in the field of molecular biology, especially in lactic acid bacteria molecular biology.

  19. The Infrared & Electro-Optical Systems Handbook. Emerging Systems and Technologies, Volume 8

    Science.gov (United States)

    1993-01-01

    ERIM staff included Ivan Clemons, Jenni Cook, Tim Kellman, Lisa Lyons, Judy Steeh, Barbara Wood, and the members of their respective organizations that...Evers, R. Sepucha, and C. Whitney, Applied Optics 18, 2638 (1979). 41. C. B. Hogge , J. F. Schultz, D. B. Mason, and W. E. Thompson, "Physical optics of...the IEEE 61, 731 (1973). 55. C. B. Hogge and R. R. Butts, AFWL-TR-78-15, U.S. Air Force Weapons Laboratory (1978). 56. L. C. Marquet, Applied Optics

  20. Genomics and proteomics: Applications in autoimmune diseases

    Directory of Open Access Journals (Sweden)

    Wolfgang Hueber

    2009-08-01

    Full Text Available Wolfgang Hueber1,2,3, William H Robinson1,21VA Palo Alto Health Care System, Palo Alto, CA, USA; 2Division of Immunology and Rheumatology, Stanford University School of Medicine, Stanford, CA, USA; 3Novartis Institutes of Biomedical Research, Novartis, Basle, SwitzerlandAbstract: Tremendous progress has been made over the past decade in the development and refinement of genomic and proteomic technologies for the identification of novel drug targets and molecular signatures associated with clinically important disease states, disease subsets, or differential responses to therapies. The rapid progress in high-throughput technologies has been preceded and paralleled by the elucidation of cytokine networks, followed by the stepwise clinical development of pathway-specific biological therapies that revolutionized the treatment of autoimmune diseases. Together, these advances provide opportunities for a long-anticipated personalized medicine approach to the treatment of autoimmune disease. The ever-increasing numbers of novel, innovative therapies will need to be harnessed wisely to achieve optimal long-term outcomes in as many patients as possible while complying with the demands of health authorities and health care providers for evidence-based, economically sound prescription of these expensive drugs. Genomic and proteomic profiling of patients with autoimmune diseases holds great promise in two major clinical areas: (1 rapid identification of new targets for the development of innovative therapies and (2 identification of patients who will experience optimal benefit and minimal risk from a specific (targeted therapy. In this review, we attempt to capture important recent developments in the application of genomic and proteomic technologies to translational research by discussing informative examples covering a diversity of autoimmune diseases.Keywords: proteomics, genomics, autoimmune diseases, antigen microarrays, 2-Dih, rheumatoid arthritis

  1. Quality not Quantity: The Role of Marine Natural Products in Drug Discovery and Reverse Chemical Proteomics

    Directory of Open Access Journals (Sweden)

    Andrew M. Piggott

    2005-06-01

    Full Text Available Reverse chemical proteomics combines affinity chromatography with phage display and promises to be a powerful new platform technology for the isolation of natural product receptors, facilitating the drug discovery process by rapidly linking biologically active small molecules to their cellular receptors and the receptors’ genes. In this paper we review chemical proteomics and reverse chemical proteomics and show how these techniques can add value to natural products research. We also report on techniques for the derivatisation of polystyrene microtitre plates with cleavable linkers and marine natural products that can be used in chemical proteomics or reverse chemical proteomics. Specifically, we have derivatised polystyrene with palau’amine and used reverse chemical proteomics to try and isolate the human receptors for this potent anticancer marine drug.

  2. An empirical strategy for characterizing bacterial proteomes across species in the absence of genomic sequences

    Energy Technology Data Exchange (ETDEWEB)

    Turse, Joshua E.; Marshall, Matthew J.; Fredrickson, Jim K.; Lipton, Mary S.; Callister, Stephen J.

    2010-11-12

    Current methods in proteomics are dependent on the availability of sequenced genomes to identify proteins. However, genomic sequences are not always available for bacteria or microbial communities, even with high throughput sequencing technology becoming more readily available. Nevertheless, the homology that exists between related bacteria makes possible the extraction of meaningful biological information from an organism’s, or community’s proteome using the genomic sequence of a near neighbor. Here, a cross-organism search strategy was used to look at the amount of proteomics information obtainable with relative genetic distance from a near neighbor organism and to identify proteins in the proteome of minimally characterized environmental isolates. We conclude that closely related organisms with sequenced genomes, can be used to characterize proteomes of organisms with unsequenced genomes. In general, a cross-organism search strategy demonstrates the first step to use of sequences genomes to evaluate the proteomes of environmental bacteria and microbial communities that have no sequenced genome

  3. Characterization of protein complexes using targeted proteomics.

    Science.gov (United States)

    Gomez, Yassel Ramos; Gallien, Sebastien; Huerta, Vivian; van Oostrum, Jan; Domon, Bruno; Gonzalez, Luis Javier

    2014-01-01

    Biological systems are not only controlled by the abundance of individual proteins, but also by the formation of complexes and the dynamics of protein-protein interactions. The identification of the components of protein complexes can be obtained by shotgun proteomics using affinity purification coupled to mass spectrometry. Such studies include the analyses of several samples and experimental controls in order to discriminate true specific interactions from unspecific interactions and contaminants. However, shotgun proteomics have limited quantification capabilities for low abundant proteins on large sample sets due to the undersampling and the stochastic precursor ion selection. In this context, targeted proteomics constitutes a powerful analytical tool to systematically detect and quantify peptides in multiple samples, for instance those obtained from affinity purification experiments. Hypothesis-driven strategies have mainly relied on the selected reaction monitoring (SRM) technique performed on triple quadrupole instruments, which enables highly selective and sensitive measurements of peptides, acting as surrogates of the pre-selected proteins, over a wide range of concentrations. More recently, novel quantitative methods based on high resolution instruments, such as the parallel reaction monitoring (PRM) technique implemented on the quadrupole-orbitrap instrument, have arisen and provided alternatives to perform quantitative analyses with enhanced selectivity.The application of targeted proteomics to protein-protein interaction experiments from plasma and other physiological fluid samples and the inclusion of parallel reaction monitoring (PRM), combined with other recent technology developments opens a vast area for clinical application of proteomics. It is anticipated that it will reveal valuable information about specific, individual, responses against drugs, exogenous proteins or pathogens.

  4. Manufacturing Methods and Technology Program for Ruggedized Tactical Fiber Optic Cable. Revision.

    Science.gov (United States)

    1982-04-01

    14830 Seicor optical Cables 631 Miracle Mile Horseheads, NY 14845 Bunker-Ramo Amphenol Div 33 East Franklin Street Danbury, Connecticut 06810 Attn: Mr. J. Makuch 21708a H-..5 ____~~ - - -*- - *-x . .- .- --. - - - -FILMED

  5. NASA Armstrong Flight Research Center (AFRC) Fiber Optic Sensing System (FOSS) Technology

    Science.gov (United States)

    Richards, Lance; Parker, Allen R.; Piazza, Anthony; Chan, Patrick; Hamory, Phil; Pena, Frank

    2014-01-01

    Attached is a power point presentation created to assist the Tech Transfer Office and the FOSS project team members in responding to inquiries from the public about the capabilities of the Fiber Optic Sensing System.

  6. Edge Control in Large Segmented Optics Using Zeeko Polishing Technology Project

    Data.gov (United States)

    National Aeronautics and Space Administration — The fabrication of very large optical telescopes for space astronomy can be prohibitively costly due to the immense weight and size of monolithic primary mirrors....

  7. Cryogenic Liquid Level-Sensing using Fiber-Optic Strain Sensor (FOSS) Technology Project

    Data.gov (United States)

    National Aeronautics and Space Administration — Armstrong innovators have developed a highly accurate method for measuring liquid levels using optical fibers. Unlike liquid level gauges that rely on discrete...

  8. Technologies for Compensation or Mitigation of Transmission Impairments in Future High-Speed Optical Networks

    Institute of Scientific and Technical Information of China (English)

    W.Weiershausen; S.Vorbeck

    2003-01-01

    The presentation will give an overview over different classes of signal impairments in ultra-long-haul and high-speed optical WDM transmission systems and adequate approaches for suppression, mitigation or compensation are discussed.

  9. Advancing adaptive optics technology: Laboratory turbulence simulation and optimization of laser guide stars

    Science.gov (United States)

    Rampy, Rachel A.

    Since Galileo's first telescope some 400 years ago, astronomers have been building ever-larger instruments. Yet only within the last two decades has it become possible to realize the potential angular resolutions of large ground-based telescopes, by using adaptive optics (AO) technology to counter the blurring effects of Earth's atmosphere. And only within the past decade have the development of laser guide stars (LGS) extended AO capabilities to observe science targets nearly anywhere in the sky. Improving turbulence simulation strategies and LGS are the two main topics of my research. In the first part of this thesis, I report on the development of a technique for manufacturing phase plates for simulating atmospheric turbulence in the laboratory. The process involves strategic application of clear acrylic paint onto a transparent substrate. Results of interferometric characterization of the plates are described and compared to Kolmogorov statistics. The range of r0 (Fried's parameter) achieved thus far is 0.2--1.2 mm at 650 nm measurement wavelength, with a Kolmogorov power law. These plates proved valuable at the Laboratory for Adaptive Optics at University of California, Santa Cruz, where they have been used in the Multi-Conjugate Adaptive Optics testbed, during integration and testing of the Gemini Planet Imager, and as part of the calibration system of the on-sky AO testbed named ViLLaGEs (Visible Light Laser Guidestar Experiments). I present a comparison of measurements taken by ViLLaGEs of the power spectrum of a plate and the real sky turbulence. The plate is demonstrated to follow Kolmogorov theory well, while the sky power spectrum does so in a third of the data. This method of fabricating phase plates has been established as an effective and low-cost means of creating simulated turbulence. Due to the demand for such devices, they are now being distributed to other members of the AO community. The second topic of this thesis pertains to understanding and

  10. Fully compatible magneto-optical sol-gel material with glass waveguides technologies: application to mode converters

    Science.gov (United States)

    Royer, François; Jamon, Damien; Broquin, Jean-Emmanuel; Amata, Hadi; Kekesi, Renata; Neveu, Sophie; Blanc-Mignon, Marie-Françoise; Ghibaudo, Elise

    2011-01-01

    To overcome the difficult problem of the integration of magneto-optical materials with classical technologies, our group has developped a composite magneto-optical material made of a hybrid organic-inorganic silica type matrix doped by magnetic nanoparticles. Thin films of this material are obtained through a soft chemistry sol-gel process which gives a full compatibility with an integration on glass substarte. Due to an interesting magneto optical activity (Faraday rotation of 310°/cm) several magneto-optical functionnalities have been realized. A thin film of such composite material coated on a pyrex™ substrate acts as non-reciprocal TE/TM mode converter. An hybrid stucture made of a composite film coated on an ion-exchanged glass waveguide has been realized with a good propagation of light through a hybrid mode. Finally, the sol gel process has been adapted in order to obtain 3D inverse opals which should behave as magnetophotonic crystals. Transmittance curves reveal the photonic band gap of such opals doped with magnetic nanoparticles.

  11. National Institute of Standards and Technology measurement service of the optical properties of biomedical phantoms: current status

    Science.gov (United States)

    Lemaillet, Paul; Cooksey, Catherine C.; Levine, Zachary H.; Pintar, Adam L.; Hwang, Jeeseong; Allen, David W.

    2016-03-01

    The National Institute of Standards and Technology (NIST) has maintained scales for reflectance and transmittance over several decades. The scales are primarily intended for regular transmittance, mirrors, and solid surface scattering diffusers. The rapidly growing area of optical medical imaging needs a scale for volume scattering of diffuse materials that are used to mimic the optical properties of tissue. Such materials are used as phantoms to evaluate and validate instruments under development intended for clinical use. To address this need, a double-integrating sphere based instrument has been installed to measure the optical properties of tissue-mimicking phantoms. The basic system and methods have been described in previous papers. An important attribute in establishing a viable calibration service is the estimation of measurement uncertainties. The use of custom models and comparisons with other established scales enabled uncertainty measurements. Here, we describe the continuation of those efforts to advance the understanding of the uncertainties through two independent measurements: the bidirectional reflectance distribution function and the bidirectional transmittance distribution function of a commercially available solid biomedical phantom. A Monte Carlo-based model is used and the resulting optical properties are compared to the values provided by the phantom manufacturer.

  12. Ergonomic design considerations for an optical data link between a warfighter's head and body-worn technologies

    Science.gov (United States)

    Trew, Noel; Linn, Aaron; Nelson, Zac; Burnett, Greg; Sedillo, Mike

    2012-06-01

    Today, warfighters are burdened by a web of cables linking technologies that span the head and torso regions of the body. These cables help to provide interoperability between helmet-worn peripherals such as head mounted displays (HMDs), cameras, and communication equipment with chest-worn computers and radios. Although promoting enhanced capabilities, this cabling also poses snag hazards and makes it difficult for the warfighter to extricate himself from his kit when necessary. A newly developed wireless personal area network (WPAN), one that uses optical transceivers, may prove to be an acceptable alternative to traditional cabling. Researchers at the Air Force Research Laboratory's 711th Human Performance Wing are exploring how best to mount the WPAN transceivers to the body in order to facilitate unimpeded data transfer while also maintaining the operator's natural range of motion. This report describes the two-step research process used to identify the performance limitations and usability of a body-worn optical wireless system. Firstly, researchers characterized the field of view for the current generation of optical WPAN transceivers. Then, this field of view was compared with anthropometric data describing the range of motion of the cervical vertebrae to see if the data link would be lost at the extremes of an operator's head movement. Finally, this report includes an additional discussion of other possible military applications for an optical WPAN.

  13. Optical technology applied to jet engine; Jet engine seigyo eno hikari gijutsu no tekiyo

    Energy Technology Data Exchange (ETDEWEB)

    Nakajima, T.; Ebina, K.; Endo, M. [Ishikawajima-Harima Heavy Industries Co. Ltd., Tokyo (Japan)

    1997-09-01

    Pyrometer that can be mounted on an aircraft engine is developed for measuring engine turbine blade temperatures. Energy radiated from the blade surface is collected by a lens and then forwarded to a photoelectric conversion photodiode through a heat-resistant optical fiber. A cleaning/purging mechanism is provided in case the lens collects dirt that will attenuate the signal for the indication of a temperature that is lower than the true temperature (in a cold shift phenomenon). The pyrometer is tested on an engine, when a measurement accuracy of {+-}10degC is attained without cold shift taking place. It responds to changes more swiftly than conventional types, which justifies its application to the control of engines. Since it works effectively to connect a bunch of optical fibers, rather than conventional electric wires, to the printed circuit board for guiding optical signals to a printed circuit board in a digital control unit, an optical backplane structure is developed. This structure is designed to be an optical waveguide type which can incorporate into itself some mechanisms of synthesizer, optical waveguide coupler, and light filter, in case of need for handling multiple transmission. The pyrometer is tested on an aircraft engine in operation at high and low temperatures, and demonstrates satisfying light-receiving and light-emitting properties. 4 refs., 10 figs.

  14. The minotaur proteome

    DEFF Research Database (Denmark)

    Bunkenborg, Jakob; García, Guadalupe Espadas; Paz, Marcia Ivonne Peña;

    2010-01-01

    Cell culture is a fundamental tool in proteomics where mammalian cells are cultured in vitro using a growth medium often supplemented with 5-15% FBS. Contamination by bovine proteins is difficult to avoid because of adherence to the plastic vessel and the cultured cells. We have generated peptide...

  15. Shaping the mitochondrial proteome.

    NARCIS (Netherlands)

    Gabaldon, T.; Huynen, M.A.

    2004-01-01

    Mitochondria are eukaryotic organelles that originated from a single bacterial endosymbiosis some 2 billion years ago. The transition from the ancestral endosymbiont to the modern mitochondrion has been accompanied by major changes in its protein content, the so-called proteome. These changes

  16. The proteome of lysosomes.

    Science.gov (United States)

    Schröder, Bernd A; Wrocklage, Christian; Hasilik, Andrej; Saftig, Paul

    2010-11-01

    Lysosomes are organelles of eukaryotic cells that are critically involved in the degradation of macromolecules mainly delivered by endocytosis and autophagocytosis. Degradation is achieved by more than 60 hydrolases sequestered by a single phospholipid bilayer. The lysosomal membrane facilitates interaction and fusion with other compartments and harbours transport proteins catalysing the export of catabolites, thereby allowing their recycling. Lysosomal proteins have been addressed in various proteomic studies that are compared in this review regarding the source of material, the organelle/protein purification scheme, the proteomic methodology applied and the proteins identified. Distinguishing true constituents of an organelle from co-purifying contaminants is a central issue in subcellular proteomics, with additional implications for lysosomes as being the site of degradation of many cellular and extracellular proteins. Although many of the lysosomal hydrolases were identified by classical biochemical approaches, the knowledge about the protein composition of the lysosomal membrane has remained fragmentary for a long time. Using proteomics many novel lysosomal candidate proteins have been discovered and it can be expected that their functional characterisation will help to understand functions of lysosomes at a molecular level that have been characterised only phenomenologically so far and to generally deepen our understanding of this indispensable organelle.

  17. Xylem sap proteomics.

    Science.gov (United States)

    de Bernonville, Thomas Dugé; Albenne, Cécile; Arlat, Matthieu; Hoffmann, Laurent; Lauber, Emmanuelle; Jamet, Elisabeth

    2014-01-01

    Proteomic analysis of xylem sap has recently become a major field of interest to understand several biological questions related to plant development and responses to environmental clues. The xylem sap appears as a dynamic fluid undergoing changes in its proteome upon abiotic and biotic stresses. Unlike cell compartments which are amenable to purification in sufficient amount prior to proteomic analysis, the xylem sap has to be collected in particular conditions to avoid contamination by intracellular proteins and to obtain enough material. A model plant like Arabidopsis thaliana is not suitable for such an analysis because efficient harvesting of xylem sap is difficult. The analysis of the xylem sap proteome also requires specific procedures to concentrate proteins and to focus on proteins predicted to be secreted. Indeed, xylem sap proteins appear to be synthesized and secreted in the root stele or to originate from dying differentiated xylem cells. This chapter describes protocols to collect xylem sap from Brassica species and to prepare total and N-glycoprotein extracts for identification of proteins by mass spectrometry analyses and bioinformatics.

  18. Proteomic analysis of tissue samples in translational breast cancer research

    DEFF Research Database (Denmark)

    Gromov, Pavel; Moreira, José; Gromova, Irina

    2014-01-01

    , and both prognosis and prediction of outcome of chemotherapy. The purpose of this review is to critically appraise what has been achieved to date using proteomic technologies and to bring forward novel strategies - based on the analysis of clinically relevant samples - that promise to accelerate......In the last decade, many proteomic technologies have been applied, with varying success, to the study of tissue samples of breast carcinoma for protein expression profiling in order to discover protein biomarkers/signatures suitable for: characterization and subtyping of tumors; early diagnosis...

  19. Proteomics: A Biotechnology Tool for Crop Improvement

    Directory of Open Access Journals (Sweden)

    Moustafa eEldakak

    2013-02-01

    Full Text Available A sharp decline in the availability of arable land and sufficient supply of irrigation water along with a continuous steep increase in food demands have exerted a pressure on farmers to produce more with fewer resources. A viable solution to release this pressure is to speed up the plant breeding process by employing biotechnology in breeding programs. The majority of biotechnological applications rely on information generated from various -omic technologies. The latest outstanding improvements in proteomic platforms and many other but related advances in plant biotechnology techniques offer various new ways to encourage the usage of these technologies by plant scientists for crop improvement programs. A combinatorial approach of accelerated gene discovery through genomics, proteomics, and other associated -omic branches of biotechnology, as an applied approach, is proving to be an effective way to speed up the crop improvement programs worldwide. In the near future, swift improvements in -omic databases are becoming critical and demand immediate attention for the effective utilization of these techniques to produce next-generation crops for the progressive farmers. Here, we have reviewed the recent advances in proteomics, as tools of biotechnology, which are offering great promise and leading the path towards crop improvement for sustainable agriculture.

  20. Approaches for targeted proteomics and its potential applications in neuroscience

    Indian Academy of Sciences (India)

    Sumit Sethi; Dipti Chourasia; Ishwar S Parhar

    2015-09-01

    An extensive guide on practicable and significant quantitative proteomic approaches in neuroscience research is important not only because of the existing overwhelming limitations but also for gaining valuable understanding into brain function and deciphering proteomics from the workbench to the bedside. Early methodologies to understand the functioning of biological systems are now improving with high-throughput technologies, which allow analysis of various samples concurrently, or of thousand of analytes in a particular sample. Quantitative proteomic approaches include both gel-based and non-gel-based methods that can be further divided into different labelling approaches. This review will emphasize the role of existing technologies, their advantages and disadvantages, as well as their applications in neuroscience. This review will also discuss advanced approaches for targeted proteomics using isotope-coded affinity tag (ICAT) coupled with laser capture microdissection (LCM) followed by liquid chromatography tandem mass spectrometric (LC-MS/MS) analysis. This technology can further be extended to single cell proteomics in other areas of biological sciences and can be combined with other ‘omics’ approaches to reveal the mechanism of a cellular alterations. This approach may lead to further investigation in basic biology, disease analysis and surveillance, as well as drug discovery. Although numerous challenges still exist, we are confident that this approach will increase the understanding of pathological mechanisms involved in neuroendocrinology, neuropsychiatric and neurodegenerative disorders by delivering protein biomarker signatures for brain dysfunction.

  1. Microbial interactions in plants: Perspectives and applications of proteomics.

    Science.gov (United States)

    Imam, Jahangir; Shukla, Pratyoosh; Mandal, Nimai Prasad; Variar, Mukund

    2016-11-21

    The structure and function of proteins involved in plant-microbe interactions is investigated through large-scale proteomics technology in a complex biological sample. Since the whole genome sequences are now available for several plant species and microbes, proteomics study has become easier, accurate and huge amount of data can be generated and analyzed during plant-microbe interactions. Proteomics approaches are highly important and relevant in many studies and showed that only genomics approaches are not sufficient enough as much significant information are lost as the proteins and not the genes coding them are final product that is responsible for the observed phenotype. Novel approaches in proteomics are developing continuously enabling the study of the various aspects in arrangements and configuration of proteins and its functions. Its application is becoming more common and frequently used in plant-microbe interactions with the advancement in new technologies. They are all the more used for the portrayal of cell and extracellular destructiveness and pathogenicity variables delivered by pathogens. This distinguishes the protein level adjustments in host plants when infected with pathogens and advantageous partners. This review provides a brief overview of different proteomics technology which is currently available followed by their exploitation of them to study the plant-microbe interaction.

  2. Market opportunity in computational proteomics.

    Science.gov (United States)

    Razvi, Enal

    2002-03-01

    The current exuberance on the potential of proteomics as a means to deploy the wealth of the human genome is expected to last into the coming years. Unlike the genome, a finite entity with a fixed number of base pairs of the genetic material, the proteome is "plastic", changing throughout growth and development and environmental stresses, as well as in pathological situations. Our proteomes change over time, and therefore there is no one proteome; the proteome is for practical purposes an infinite entity. It is therefore crucial to build systems that are capable of manipulating the information content that is the proteome, thence the need for computational proteomics as a discipline. In this Market View article, we present the industry landscape that is emerging in the computational proteomics space. This space is still in its infancy and for the most part undefined; therefore we seek to present the market opportunity in informatics in the drug discovery space and then extend that to an examination of industry trends in proteomics. Thus, the gestalt is a set of predictions as to the evolution of the landscape in computational proteomics over the coming years.

  3. Proteomic maps of breast cancer subtypes

    DEFF Research Database (Denmark)

    Tyanova, Stefka; Albrechtsen, Reidar; Kronqvist, Pauliina;

    2016-01-01

    Systems-wide profiling of breast cancer has almost always entailed RNA and DNA analysis by microarray and sequencing techniques. Marked developments in proteomic technologies now enable very deep profiling of clinical samples, with high identification and quantification accuracy. We analysed 40...... oestrogen receptor positive (luminal), Her2 positive and triple negative breast tumours and reached a quantitative depth of >10,000 proteins. These proteomic profiles identified functional differences between breast cancer subtypes, related to energy metabolism, cell growth, mRNA translation and cell......-cell communication. Furthermore, we derived a signature of 19 proteins, which differ between the breast cancer subtypes, through support vector machine (SVM)-based classification and feature selection. Remarkably, only three proteins of the signature were associated with gene copy number variations and eleven were...

  4. Mode division multiplexing technology for single-fiber optical trapping axial-position adjustment.

    Science.gov (United States)

    Liu, Zhihai; Wang, Lei; Liang, Peibo; Zhang, Yu; Yang, Jun; Yuan, Libo

    2013-07-15

    We demonstrate trapped yeast cell axial-position adjustment without moving the optical fiber in a single-fiber optical trapping system. The dynamic axial-position adjustment is realized by controlling the power ratio of the fundamental mode beam (LP01) and the low-order mode beam (LP11) generated in a normal single-core fiber. In order to separate the trapping positions produced by the two mode beams, we fabricate a special fiber tapered tip with a selective two-step method. A yeast cell of 6 μm diameter is moved along the optical axis direction for a distance of ~3 μm. To the best of our knowledge, this is the first demonstration of the trapping position adjustment without moving the fiber for single-fiber optical tweezers. The excitation and utilization of multimode beams in a single fiber constitutes a new development for single-fiber optical trapping and makes possible more practical applications in biomedical research fields.

  5. 串联亲和纯化技术及其在植物蛋白质组研究中的应用%Tandem affinity purification technology and its applications in plant proteomic research

    Institute of Scientific and Technical Information of China (English)

    王丰青; 吴为人; 陈新建; 李娟; 周艳; 张重义

    2013-01-01

    Tandem affinity purification (TAP) is a novel technology for protein complex purification,which has been extensively utilized for the identification or verification of protein-protein interactions and the construction of protein interaction networks.Its basic principle is that the TAP tag is fused to the target protein of interest and then the TAP-tagged protein together with any associated proteins are isolated from the host organism in two sequential affinity purification steps.Initially,TAP technology was mainly used in animals and microbes.But in recent years,more and more applications of TAP technology in plants have been reported with the emergence of new TAP tags and optimized methods,providing an efficient tool for plant proteomics.This paper briefly introduced the application of the TAP method on plants,and analyzed limiting factors in its application.%串联亲和纯化(TAP)是一项新颖的蛋白质复合物纯化技术,已被广泛应用于鉴定或验证蛋白质间的相互作用以及建立蛋白质互作网络,其基本原理是,将TAP标签融合到目标蛋白上,然后经过两步亲和纯化,获得融合蛋白及其结构关联蛋白.TAP技术最初主要在动物和微生物中应用.近几年来,随着新型标签的出现和方法的改进,TAP技术在植物中的应用逐渐增多,为植物蛋白质组学的研究提供了一个有效的手段.简要介绍TAP方法在植物中的应用情况,并对TAP方法应用的限制因素进行分析.

  6. Application of optical fiber sensing technology in the field of security%光纤传感技术在安防领域的应用

    Institute of Scientific and Technical Information of China (English)

    覃健文; 韦焕华

    2013-01-01

    On the basis of optical fiber sensing technology and its application was introduced briefly,optical fiber sensing technology application in security was described with emphasis,and proposed suggestion and forecast for practical process of optical fiber fence alarm system based on optical fiber sensing technology.%在简要介绍光纤传感技术及其应用的基础上,重点阐述了光纤传感技术在安防领域的应用,并对基于光纤传感技术的光纤围栏报警系统的实用化进程提出建议及展望.

  7. The Feasibility of a Fully Miniaturized Magneto-Optical Trap for Portable Ultracold Quantum Technology

    CERN Document Server

    Rushton, Joseph; Himsworth, Matt

    2014-01-01

    Experiments using laser cooled atoms and ions show real promise for practical applications in quantum- enhanced metrology, timing, navigation, and sensing as well as exotic roles in quantum computing, networking and simulation. The heart of many of these experiments has been translated to microfabricated platforms known as atom chips whose construction readily lend themselves to integration with larger systems and future mass production. To truly make the jump from laboratory demonstrations to practical, rugged devices, the complex surrounding infrastructure (including vacuum systems, optics, and lasers) also needs to be miniatur- ized and integrated. In this paper we explore the feasibility of applying this approach to the Magneto-Optical Trap; incorporating the vacuum system, atom source and optical geometry into a permanently sealed micro- litre system capable of maintaining $10^{-10}$ mbar for more than 1000 days of operation with passive pumping alone. We demonstrate such an engineering challenge is achi...

  8. High Speed and High Spatial Density Parameter Measurement Using Fiber Optic Sensing Technology

    Science.gov (United States)

    Parker, Allen R. Jr. (Inventor); Chan, Hon Man (Inventor); Richards, William Lance (Inventor); Piazza, Anthony (Inventor); Hamory, Philip J (Inventor)

    2017-01-01

    The present invention is an improved fiber optic sensing system (FOSS) having the ability to provide both high spatial resolution and high frequency strain measurements. The inventive hybrid FOSS fiber combines sensors from high acquisition speed and low spatial resolution Wavelength-Division Multiplexing (WDM) systems and from low acquisition speed and high spatial resolution Optical Frequency Domain Reflection (OFDR) systems. Two unique light sources utilizing different wavelengths are coupled with the hybrid FOSS fiber to generate reflected data from both the WDM sensors and OFDR sensors operating on a single fiber optic cable without incurring interference from one another. The two data sets are then de-multiplexed for analysis, optionally with conventionally-available WDM and OFDR system analyzers.

  9. Integrated optical frequency shifter in silicon-organic hybrid (SOH) technology.

    Science.gov (United States)

    Lauermann, M; Weimann, C; Knopf, A; Heni, W; Palmer, R; Koeber, S; Elder, D L; Bogaerts, W; Leuthold, J; Dalton, L R; Rembe, C; Freude, W; Koos, C

    2016-05-30

    We demonstrate for the first time a waveguide-based frequency shifter on the silicon photonic platform using single-sideband modulation. The device is based on silicon-organic hybrid (SOH) electro-optic modulators, which combine conventional silicon-on-insulator waveguides with highly efficient electro-optic cladding materials. Using small-signal modulation, we demonstrate frequency shifts of up to 10 GHz. We further show large-signal modulation with optimized waveforms, enabling a conversion efficiency of -5.8 dB while suppressing spurious side-modes by more than 23 dB. In contrast to conventional acousto-optic frequency shifters, our devices lend themselves to large-scale integration on silicon substrates, while enabling frequency shifts that are several orders of magnitude larger than those demonstrated with all-silicon serrodyne devices.

  10. Evaluation of artifact reduction in optical coherence tomography angiography with real-time tracking and motion correction technology.

    Science.gov (United States)

    Camino, Acner; Zhang, Miao; Gao, Simon S; Hwang, Thomas S; Sharma, Utkarsh; Wilson, David J; Huang, David; Jia, Yali

    2016-10-01

    Artifacts introduced by eye motion in optical coherence tomography angiography (OCTA) affect the interpretation of images and the quantification of parameters with clinical value. Eradication of such artifacts in OCTA remains a technical challenge. We developed an algorithm that recognizes five different types of motion artifacts and used it to evaluate the performance of three motion removal technologies. On en face maximum projection of flow images, the summed flow signal in each row and column and the correlation between neighboring rows and columns were calculated. Bright line artifacts were recognized by large summed flow signal. Drifts, distorted lines, and stretch artifacts exhibited abnormal correlation values. Residual lines were simultaneously a local maximum of summed flow and a local minimum of correlation. Tracking-assisted scanning integrated with motion correction technology (MCT) demonstrated higher performance than tracking or MCT alone in healthy and diabetic eyes.

  11. Proteomics Standards Initiative: Fifteen Years of Progress and Future Work.

    Science.gov (United States)

    Deutsch, Eric W; Orchard, Sandra; Binz, Pierre-Alain; Bittremieux, Wout; Eisenacher, Martin; Hermjakob, Henning; Kawano, Shin; Lam, Henry; Mayer, Gerhard; Menschaert, Gerben; Perez-Riverol, Yasset; Salek, Reza M; Tabb, David L; Tenzer, Stefan; Vizcaíno, Juan Antonio; Walzer, Mathias; Jones, Andrew R

    2017-09-15

    The Proteomics Standards Initiative (PSI) of the Human Proteome Organization (HUPO) has now been developing and promoting open community standards and software tools in the field of proteomics for 15 years. Under the guidance of the chair, cochairs, and other leadership positions, the PSI working groups are tasked with the development and maintenance of community standards via special workshops and ongoing work. Among the existing ratified standards, the PSI working groups continue to update PSI-MI XML, MITAB, mzML, mzIdentML, mzQuantML, mzTab, and the MIAPE (Minimum Information About a Proteomics Experiment) guidelines with the advance of new technologies and techniques. Furthermore, new standards are currently either in the final stages of completion (proBed and proBAM for proteogenomics results as well as PEFF) or in early stages of design (a spectral library standard format, a universal spectrum identifier, the qcML quality control format, and the Protein Expression Interface (PROXI) web services Application Programming Interface). In this work we review the current status of all of these aspects of the PSI, describe synergies with other efforts such as the ProteomeXchange Consortium, the Human Proteome Project, and the metabolomics community, and provide a look at future directions of the PSI.

  12. Analyzing large-scale proteomics projects with latent semantic indexing.

    Science.gov (United States)

    Klie, Sebastian; Martens, Lennart; Vizcaíno, Juan Antonio; Côté, Richard; Jones, Phil; Apweiler, Rolf; Hinneburg, Alexander; Hermjakob, Henning

    2008-01-01

    Since the advent of public data repositories for proteomics data, readily accessible results from high-throughput experiments have been accumulating steadily. Several large-scale projects in particular have contributed substantially to the amount of identifications available to the community. Despite the considerable body of information amassed, very few successful analyses have been performed and published on this data, leveling off the ultimate value of these projects far below their potential. A prominent reason published proteomics data is seldom reanalyzed lies in the heterogeneous nature of the original sample collection and the subsequent data recording and processing. To illustrate that at least part of this heterogeneity can be compensated for, we here apply a latent semantic analysis to the data contributed by the Human Proteome Organization's Plasma Proteome Project (HUPO PPP). Interestingly, despite the broad spectrum of instruments and methodologies applied in the HUPO PPP, our analysis reveals several obvious patterns that can be used to formulate concrete recommendations for optimizing proteomics project planning as well as the choice of technologies used in future experiments. It is clear from these results that the analysis of large bodies of publicly available proteomics data by noise-tolerant algorithms such as the latent semantic analysis holds great promise and is currently underexploited.

  13. DNA Optical Detection Based on Porous Silicon Technology: from Biosensors to Biochips

    Directory of Open Access Journals (Sweden)

    Ivo Rendina

    2007-02-01

    Full Text Available A photochemical functionalization process which passivates the porous silicon surface of optical biosensors has been optimized as a function of the thickness and the porosity of the devices. The surface modification has been characterized by contact angle measurements. Fluorescence measurements have been used to investigate the stability of the DNA single strands bound to the nanostructured material. A dose-response curve for an optical label-free biosensor in the 6-80 μM range has been realized.

  14. Application of optical fiber sensing technology in the hydraulic decoking monitoring system

    Science.gov (United States)

    Fan, Yun-feng; Tong, Xing-lin; Ji, Tao; Gao, Xue-qing; Zhong, Dong

    2013-09-01

    On the basis of the analysis of the current hydraulic decoking monitoring system, it is proposed that use optical fiber Bragg grating (FBG) vibration sensor and fiber Fabry-Perot (FP) acoustic sensors to online monitor vibration signal and audio signal hydraulic of the coke drum in the running state progress, analysis the vibration sensor and acoustic sensor used in the system. Based on the actual monitoring results in Sinopec Wuhan Branch , the fiber optic acoustic emission sensors is more suitable for the hydraulic decoking online monitoring system than the FBG vibration sensor ,which can more accurate monitor of hydraulic decoking.

  15. Recent advances in mass spectrometry-based proteomics of gastric cancer

    Science.gov (United States)

    Kang, Changwon; Lee, Yejin; Lee, J Eugene

    2016-01-01

    The last decade has witnessed remarkable technological advances in mass spectrometry-based proteomics. The development of proteomics techniques has enabled the reliable analysis of complex proteomes, leading to the identification and quantification of thousands of proteins in gastric cancer cells, tissues, and sera. This quantitative information has been used to profile the anomalies in gastric cancer and provide insights into the pathogenic mechanism of the disease. In this review, we mainly focus on the advances in mass spectrometry and quantitative proteomics that were achieved in the last five years and how these up-and-coming technologies are employed to track biochemical changes in gastric cancer cells. We conclude by presenting a perspective on quantitative proteomics and its future applications in the clinic and translational gastric cancer research. PMID:27729735

  16. Proteome research in food science.

    Science.gov (United States)

    Pischetsrieder, Monika; Baeuerlein, Rainer

    2009-09-01

    The proteome is the totality of proteins present in a biological sample. In contrast to the static genome, the proteome is highly dynamic, influenced by the genome and many external factors, such as the state of development, tissue type, metabolic state, and various interactions. Thus, the proteome reflects very closely the biological (and chemical) processes occurring in a system. For proteome analysis, gel based and shotgun methods are most widely applied. Because of the potential to generate a systematic view of protein composition and biological as well as chemical interactions, the application of proteome analysis in food science is steadily growing. This tutorial review introduces several fields in food science, where proteomics has been successfully applied: analysis of food composition, safety assessment of genetically modified food, the search for marker proteins for food authentication, identification of food allergens, systematic analysis of the physiological activity of food, analysis of the effects of processing on food proteins and the improvement of food quality.

  17. Performances for confocal X-ray diffraction technology based on polycapillary slightly focusing X-ray optics

    Energy Technology Data Exchange (ETDEWEB)

    Liu, Hehe; Liu, Zhiguo [The Key Laboratory of Beam Technology and Materials Modification of the Ministry of Education, Beijing Normal University, Beijing 100875 (China); College of Nuclear Science and Technology, Beijing Normal University, Beijing 100875 (China); Beijing Radiation Center, Beijing 100875 (China); Sun, Tianxi, E-mail: stxbeijing@163.com [The Key Laboratory of Beam Technology and Materials Modification of the Ministry of Education, Beijing Normal University, Beijing 100875 (China); College of Nuclear Science and Technology, Beijing Normal University, Beijing 100875 (China); Beijing Radiation Center, Beijing 100875 (China); Peng, Song [The Key Laboratory of Beam Technology and Materials Modification of the Ministry of Education, Beijing Normal University, Beijing 100875 (China); College of Nuclear Science and Technology, Beijing Normal University, Beijing 100875 (China); Beijing Radiation Center, Beijing 100875 (China); Ma, Yongzhong [Center for Disease Control and Prevention of Beijing, Beijing 100013 (China); Sun, Weiyuan; Li, Yude; Lin, Xiaoyan; Zhao, Weigang; Zhao, Guangcui; Luo, Ping; Pan, Qiuli; Ding, Xunliang [The Key Laboratory of Beam Technology and Materials Modification of the Ministry of Education, Beijing Normal University, Beijing 100875 (China); College of Nuclear Science and Technology, Beijing Normal University, Beijing 100875 (China); Beijing Radiation Center, Beijing 100875 (China)

    2013-09-21

    The confocal X-ray diffraction (XRD) technology based on a polycapillary slightly focusing X-ray lens (PSFXRL) in excitation channel and a polycapillary parallel X-ray lens (PPXRL) with a long input focal distance in detection channel was developed. The output focal spot of the PSFXRL and the input focal spot of the PPXRL were adjusted in confocal configuration, and only the X-rays from the volume overlapped by these foci could be accordingly detected. This confocal configuration was helpful in decreasing background. The convergence of the beam focused by the PSFXRL and divergence of the beam which could be collected by the PPXRL with a long input focal distance were both about 9 mrad at 8 keV. This was helpful in improving the resolution of lattice spacing of this confocal XRD technology. The gain in power density of such PSFXRL and PPXRL was about 120 and 7 at 11 keV, respectively, which was helpful in using the low power source to perform XRD analysis efficiently. The performances of this confocal XRD technology were provided, and some common plastics were analyzed. The experimental results demonstrated that the confocal diffraction technology base on polycapillary slightly focusing X-ray optics had wide potential applications.

  18. Fiber Optic 3-D Space Piezoelectric Accelerometer and its Antinoise Technology

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    The mechanical structure of piezoelectric accelerometer is designed, and the operation equations on X-, Y-, and Z-axes are deduced. The test results of 3-D frequency response are given. Noise disturbances are effectively eliminated by using fiber optic transmission and synchronous detection.

  19. SOFTWARE FOR SIMULATION OF TECHNOLOGICAL ADAPTATION OF THE OPTICAL INSTRUMENTS SYSTEMS

    Directory of Open Access Journals (Sweden)

    N. K. Artioukhina

    2012-01-01

    Full Text Available Programs for calculation and analysis of optical systems of any class are provides. The most effective was to combine the programs into a complex with the general system of mathematical models. A characteristic feature is to unify the exchange of information between these programs and software systems Opal and Zemax.

  20. Surface Contaminant Control Technologies to Improve Laser Damage Resistance of Optics

    Directory of Open Access Journals (Sweden)

    Xiaofeng Cheng

    2014-01-01

    Full Text Available The large high-power solid lasers, such as the National Ignition Facility (NIF of America and the Shenguang-III (SG-III laser facility of China, can output over 2.1 MJ laser pulse for the inertial confinement fusion (ICF experiments. Because of the enhancement of operating flux and the expansion of laser driver scale, the problem of contamination seriously influences their construction period and operation life. During irradiation by intense laser beams, the contaminants on the metallic surface of beam tubes can be transmitted to the optical surfaces and lead to damage of optical components. For the high-power solid-state laser facilities, contamination control focuses on the slab amplifiers, spatial filters, and final-optical assemblies. In this paper, an effective solution to control contaminations including the whole process of the laser driver is put forward to provide the safe operation of laser facilities, and the detailed technical methods of contamination control such as washing, cleanliness metrology, and cleanliness protecting are also introduced to reduce the probability of laser-induced damage of optics. The experimental results show that the cleanliness level of SG-III laser facility is much better to ensure that the laser facility can safely operate at high energy flux.

  1. Laser & Fiber Optics: Instructional Manual. The North Dakota High Technology Mobile Laboratory Project.

    Science.gov (United States)

    Eickhoff, Luvern R.

    This instructional manual contains 20 learning activity packets for use in a workshop on lasers and fiber optics. The lessons cover the following topics: what a laser; coherent light; setting up the laser; characteristics of the laser beam; scattering of light; laser beam divergence, intensity, color, ophthalmology, and reflections; directivity of…

  2. Laser & Fiber Optics: Instructional Manual. The North Dakota High Technology Mobile Laboratory Project.

    Science.gov (United States)

    Eickhoff, Luvern R.

    This instructional manual contains 20 learning activity packets for use in a workshop on lasers and fiber optics. The lessons cover the following topics: what a laser; coherent light; setting up the laser; characteristics of the laser beam; scattering of light; laser beam divergence, intensity, color, ophthalmology, and reflections; directivity of…

  3. All-optical broadcast and multicast technologies based on PPLN waveguide

    DEFF Research Database (Denmark)

    Ye, Lingyun; Wang, Ju; Hu, Hao

    2013-01-01

    All-optical 1×4 broadcast and 1×3 multicast experiments of a 40-Gb/s return-to-zero on-off keying (RZ-OOK) signal based on a periodically poled lithium niobate (PPLN) waveguide are demonstrated in this letter. Clear opened eye diagrams and error-free performance are achieved for the broadcast...

  4. Implant planning and placement using optical scanning and cone beam CT technology

    NARCIS (Netherlands)

    J.M. van der Zel

    2008-01-01

    There is a growing interest in minimally invasive implant therapy as a standard prosthodontic treatment, providing complete restoration of occlusal function. A new treatment method (CADDIMA), which combines both computerized tomographic (CT) and optical laser-scan data for planning and design of sur

  5. Large-scale integrated optics using TriPleXTM waveguide technology: from UV to IR

    NARCIS (Netherlands)

    Heideman, Rene; Leinse, Arne; Hoving, Willem; Dekker, R.; Geuzebroek, D.H.; Klein, E.J.; Stoffer, Remco; Roeloffzen, C.G.H.; Zhuang, L.; Meijerink, Arjan; Glebov, Alexei L.; Chen, Ray T.

    2009-01-01

    We present a new class of low-loss integrated optical waveguide structures as CMOS-compatible industrial standard for photonic integration on silicon or glass. A TriPleXTM waveguide is basically formed by a -preferably rectangular- silicon nitride (Si3N4) shell filled with and encapsulated by

  6. Innovation on Energy Power Technology (24)Development of Composite Fiber-Optic Ground Wire

    Science.gov (United States)

    Hanada, Toshiki; Tamura, Kiyoshi

    In correspondence with the development of the high information-oriented society, macroscale of the information voltage by the optical fiber is planned. In such situation, it is OPGW forming the basis of the current communication. I introduce process about this development.

  7. Optical fiber grating based technologies and their applications: from nuclear fusion to medical

    NARCIS (Netherlands)

    Cheng, L.K.; Vliegenhart, W.A.; Habisreuther, T.

    2012-01-01

    In the last decades, Fiber Optic (FO) sensor has gained increasing acceptance. Among the different FO sensor types, Fiber Bragg Grating is most widely used due to its commercial availability and the unique multiplexing potential. The latter feature enables the development of large sensor array and/o

  8. Application of pressurized solvents for ultra fast trypsin hydrolysis in proteomics: Proteomics on the fly

    OpenAIRE

    López-Ferrer, Daniel; Petritis, Konstantinos; Hixson, Kim K.; Heibeck, Tyler H.; Moore, Ronald J; Belov, Mikhail E.; Camp, David G.; Smith, Richard D.

    2008-01-01

    A new method for rapid proteolytic digestion of proteins under high pressure that uses pressure cycling technology in the range of 5 to 35 kpsi was demonstrated for proteomic analysis. Successful in-solution digestions of single proteins and complex protein mixtures were achieved in 60 s and then analyzed by reversed phase liquid chromatography-electrospray ionization ion trap-mass spectrometry. Method performance in terms of the number of Shewanella oneidensis peptides and proteins identifie...

  9. An introduction to proteome bioinformatics.

    Science.gov (United States)

    Jones, Andrew R; Hubbard, Simon J

    2010-01-01

    This book is part of the Methods in Molecular Biology series, and provides a general overview of computational approaches used in proteome research. In this chapter, we give an overview of the scope of the book in terms of current proteomics experimental techniques and the reasons why computational approaches are needed. We then give a summary of each chapter, which together provide a picture of the state of the art in proteome bioinformatics research.

  10. Development of Optical Fiber Technology in Poland, International Journal of Electronics and Telecommunication, vol. 57, no 2, pp.191-197, July 2011

    CERN Document Server

    Dorosz, J

    2011-01-01

    In this paper, the authors, chairmen of the 13th Conference on Optical Fibers and Their Applications OFA2011, and editors of the conference proceedings summarize the development of optical fiber technology in Poland (during the period of 2009- 2011) on the basis of papers presented there and consecutively published in this volume. The digest is thus not full but covers the periodically presented material every 18 months during the meetings on optical fibers in Białystok-Białowie˙za and Lublin- Krasnobród. OFC systems are developed for HEP experiments and accelerators. OFC systems are also developed for virtual atomic clocks. EuCARD information presentation was organized during this meeting. Keywords— optical fibers, optical communication systems, photonic sources and detectors, photonic sensors, integrated optics, photonics applications, photonic materials.

  11. Optical and mechanical properties of nanofibrillated cellulose: Toward a robust platform for next-generation green technologies.

    Science.gov (United States)

    Simão, Claudia D; Reparaz, Juan S; Wagner, Markus R; Graczykowski, Bartlomiej; Kreuzer, Martin; Ruiz-Blanco, Yasser B; García, Yamila; Malho, Jani-Markus; Goñi, Alejandro R; Ahopelto, Jouni; Sotomayor Torres, Clivia M

    2015-08-01

    Nanofibrillated cellulose, a polymer that can be obtained from one of the most abundant biopolymers in nature, is being increasingly explored due to its outstanding properties for packaging and device applications. Still, open challenges in engineering its intrinsic properties remain to address. To elucidate the optical and mechanical stability of nanofibrillated cellulose as a standalone platform, herein we report on three main findings: (i) for the first time an experimental determination of the optical bandgap of nanofibrillated cellulose, important for future modeling purposes, based on the onset of the optical bandgap of the nanofibrillated cellulose film at Eg≈275 nm (4.5 eV), obtained using absorption and cathodoluminescence measurements. In addition, comparing this result with ab-initio calculations of the electronic structure the exciton binding energy is estimated to be Eex≈800 meV; (ii) hydrostatic pressure experiments revealed that nanofibrillated cellulose is structurally stable at least up to 1.2 GPa; and (iii) surface elastic properties with repeatability better than 5% were observed under moisture cycles with changes of the Young modulus as large as 65%. The results obtained show the precise determination of significant properties as elastic properties and interactions that are compared with similar works and, moreover, demonstrate that nanofibrillated cellulose properties can be reversibly controlled, supporting the extended potential of nanofibrillated cellulose as a robust platform for green-technology applications.

  12. An experimental indoor phasing system based on active optics using dispersed Hartmann sensing technology in the visible waveband

    Institute of Scientific and Technical Information of China (English)

    Yong Zhang; Gen-Rong Liu; Yue-Fei Wang; Ye-Ping Li; Ya-Jun Zhang; Liang Zhang; Yi-Zhong Zeng; Jie Zhang

    2011-01-01

    A telescope with a larger primary mirror can collect much more light and resolve objects much better than one with a smaller mirror,and so the larger version is always pursued by astronomers and astronomical technicians.Instead of using a monolithic primary mirror,more and more large telescopes,which are currently being planned or in construction,have adopted a segmented primary mirror design.Therefore,how to sense and phase such a primary mirror is a key issue for the future of extremely large optical/infrared telescopes.The Dispersed Fringe Sensor (DFS),or Dispersed Hartmann Sensor (DHS),is a non-contact method using broadband point light sources and it can estimate the piston by the two-directional spectrum formed by the transmissive grating's dispersion and lenslet array.Thus it can implement the combination of co-focusing by Shack-Hartmann technology and phasing by dispersed fringe sensing technologies such as the template-mapping method and the Hartmann method.We introduce the successful design,construction and alignment of our dispersed Hartmann sensor together with its design principles and simulations.We also conduct many successful real phasing tests and phasing corrections in the visible waveband using our existing indoor segmented mirror optics platform.Finally,some conclusions are reached based on the test and correction of experimental results.

  13. Metal-Mesh Optical Filter Technology for Mid IR, Far IR, and Submillimeter Project

    Data.gov (United States)

    National Aeronautics and Space Administration — The innovative, high transmission band-pass filter technology proposed here is an improvement in multilayer metal-mesh filter design and manufacture for the far IR...

  14. Precision Mobile-Joint and Latching Technologies for Deployable Optical Systems Project

    Data.gov (United States)

    National Aeronautics and Space Administration — Planned future NASA missions in astrophysics will push the state of the art in current opto-mechanical technologies. Specifically, precision deployable structures...

  15. Plant redox proteomics

    DEFF Research Database (Denmark)

    Navrot, Nicolas; Finnie, Christine; Svensson, Birte

    2011-01-01

    In common with other aerobic organisms, plants are exposed to reactive oxygen species resulting in formation of post-translational modifications related to protein oxidoreduction (redox PTMs) that may inflict oxidative protein damage. Accumulating evidence also underscores the importance of redox...... PTMs in regulating enzymatic activities and controlling biological processes in plants. Notably, proteins controlling the cellular redox state, e.g. thioredoxin and glutaredoxin, appear to play dual roles to maintain oxidative stress resistance and regulate signal transduction pathways via redox PTMs....... To get a comprehensive overview of these types of redox-regulated pathways there is therefore an emerging interest to monitor changes in redox PTMs on a proteome scale. Compared to some other PTMs, e.g. protein phosphorylation, redox PTMs have received less attention in plant proteome analysis, possibly...

  16. Optical fronthauling for 5G mobile: A perspective of passive metro WDM technology

    DEFF Research Database (Denmark)

    Zou, Shihuan Jim; Wagner, Christoph; Eiselt, Michael

    2017-01-01

    We discuss the necessity of passive WDM technology in the 5G fronthaul application. The proof-of-concept field trial showed that the proposed system integrated seamlessly with the current wireless equipment and had no impact on services.......We discuss the necessity of passive WDM technology in the 5G fronthaul application. The proof-of-concept field trial showed that the proposed system integrated seamlessly with the current wireless equipment and had no impact on services....

  17. Proteomics:addressing the challenges of multiple myeloma

    Institute of Scientific and Technical Information of China (English)

    Feng Ge; Shengce Tao; Lijun Bi; Zhiping Zhang; Xian'En Zhang

    2011-01-01

    Multiple myeloma (MM) is a malignancy of terminally differentiated B-iymphocytes that accounts for ~13% of all hematologic cancers. Despite a wealth of knowledge describing the molecular biology of MM as well as signifi-cant advances in therapeutics, this disease remains incur-able. Since proteins govern the cellular structure and biological function, a wide selection of proteomic approaches holds great promise for increasing our under-standing of this disease, such as by investigating the dynamic nature of protein expression, cellular and subcel-lular distribution, post-translational modifications, and interactions at both the cellular and suhcellular levels.The aims of this review are to introduce the available and emerging proteomic technologies that have potential applications in the study of MM and to highlight the current status of proteomic studies of MM. To date,although there have been a limited number of proteomic studies in MM, those performed have provided valuable information with regard to MM diagnosis and therapy. The potential future application of proteomic technologies is expected to provide new avenues in MM diagnostics, individualized therapy design and therapy response sur-veillance for the clinician.

  18. What gastric cancer proteomic studies show about gastric carcinogenesis?

    Science.gov (United States)

    Leal, Mariana Ferreira; Wisnieski, Fernanda; de Oliveira Gigek, Carolina; do Santos, Leonardo Caires; Calcagno, Danielle Queiroz; Burbano, Rommel Rodriguez; Smith, Marilia Cardoso

    2016-08-01

    Gastric cancer is a complex, heterogeneous, and multistep disease. Over the past decades, several studies have aimed to determine the molecular factors that lead to gastric cancer development and progression. After completing the human genome sequencing, proteomic technologies have presented rapid progress. Differently from the relative static state of genome, the cell proteome is dynamic and changes in pathologic conditions. Proteomic approaches have been used to determine proteome profiles and identify differentially expressed proteins between groups of samples, such as neoplastic and nonneoplastic samples or between samples of different cancer subtypes or stages. Therefore, proteomic technologies are a useful tool toward improving the knowledge of gastric cancer molecular pathogenesis and the understanding of tumor heterogeneity. This review aimed to summarize the proteins or protein families that are frequently identified by using high-throughput screening methods and which thus may have a key role in gastric carcinogenesis. The increased knowledge of gastric carcinogenesis will clearly help in the development of new anticancer treatments. Although the studies are still in their infancy, the reviewed proteins may be useful for gastric cancer diagnosis, prognosis, and patient management.

  19. Opportunities and Challenges for Nutritional Proteomics in Cancer Prevention12

    Science.gov (United States)

    Romagnolo, Donato F.; Milner, John A.

    2012-01-01

    Knowledge gaps persist about the efficacy of cancer prevention strategies based on dietary food components. Adaptations to nutrient supply are executed through tuning of multiple protein networks that include transcription factors, histones, modifying enzymes, translation factors, membrane and nuclear receptors, and secreted proteins. However, the simultaneous quantitative and qualitative measurement of all proteins that regulate cancer processes is not practical using traditional protein methodologies. Proteomics offers an attractive opportunity to fill this knowledge gap and unravel the effects of dietary components on protein networks that impinge on cancer. The articles presented in this supplement are from talks proffered in the “Nutrition Proteomics and Cancer Prevention” session at the American Institute for Cancer Research Annual Research Conference on Food, Nutrition, Physical Activity and Cancer held in Washington, DC on October 21 and 22, 2010. Recent advances in MS technologies suggest that studies in nutrition and cancer prevention may benefit from the adoption of proteomic tools to elucidate the impact on biological processes that govern the transition from normal to malignant phenotype; to identify protein changes that determine both positive and negative responses to food components; to assess how protein networks mediate dose-, time-, and tissue-dependent responses to food components; and, finally, for predicting responders and nonresponders. However, both the limited accessibility to proteomic technologies and research funding appear to be hampering the routine adoption of proteomic tools in nutrition and cancer prevention research. PMID:22649262

  20. OFDM 技术在光纤通信系统中的应用探究%Application of OFDM Technology in Optical Communication System

    Institute of Scientific and Technical Information of China (English)

    程敏捷

    2015-01-01

    Optical communication system based on OFDM technology combines the advantages of both OFDM technology and optical communication.In optical system with features of high speed,ultra long distance and huge capacity,OFDM can be regarded as a key technology.This paper briefly outlines OFDM technology,describes the characteristics of optical communi-cation systems,and explores the comprehensive application of OFDM technology in optical communication system.%基于 OFDM 技术的光纤通信系统融合了 OFDM 技术以及光纤通信的双重优点。在高速率、超长距离、大容量的光纤系统中,光 OFDM 可作为关键技术来应用。文中简要的概述 OFDM 技术,介绍了光纤通信系统的特性,探究了OFDM 技术在光纤通信系统中的综合应用。

  1. Research on fault location technology based on BP neural network in DWDM optical network

    Institute of Scientific and Technical Information of China (English)

    LIAO Xiao-min; ZHANG Yin-fa; YANG Shi-ping; LIN Chu-shan

    2008-01-01

    BP neural network is introduced to the fault location field of DWDM optical network in this paper. The alarm characteris-tics of the optical network equipments are discussed, and alarm vector and fault vector diagrams are generated by analyzingsome typical instances. A 17×14×18 BP neural network structure is constructed and trained by using MATLAB. Bycomparing the training performances, the best training algorithm of fault location among the three training algorithms ischosen. Numerical simulation results indicate that the sum squared error (SSE) of fault location is less than 0.01, and theprocessing time is less than 100 ms. This method not only well deals with the missing alarms or false alarms, but alsoimproves the fault location accuracy and real-time ability.

  2. De novo assembly of Dekkera bruxellensis: a multi technology approach using short and long-read sequencing and optical mapping.

    Science.gov (United States)

    Olsen, Remi-Andre; Bunikis, Ignas; Tiukova, Ievgeniia; Holmberg, Kicki; Lötstedt, Britta; Pettersson, Olga Vinnere; Passoth, Volkmar; Käller, Max; Vezzi, Francesco

    2015-01-01

    It remains a challenge to perform de novo assembly using next-generation sequencing (NGS). Despite the availability of multiple sequencing technologies and tools (e.g., assemblers) it is still difficult to assemble new genomes at chromosome resolution (i.e., one sequence per chromosome). Obtaining high quality draft assemblies is extremely important in the case of yeast genomes to better characterise major events in their evolutionary history. The aim of this work is two-fold: on the one hand we want to show how combining different and somewhat complementary technologies is key to improving assembly quality and correctness, and on the other hand we present a de novo assembly pipeline we believe to be beneficial to core facility bioinformaticians. To demonstrate both the effectiveness of combining technologies and the simplicity of the pipeline, here we present the results obtained using the Dekkera bruxellensis genome. In this work we used short-read Illumina data and long-read PacBio data combined with the extreme long-range information from OpGen optical maps in the task of de novo genome assembly and finishing. Moreover, we developed NouGAT, a semi-automated pipeline for read-preprocessing, de novo assembly and assembly evaluation, which was instrumental for this work. We obtained a high quality draft assembly of a yeast genome, resolved on a chromosomal level. Furthermore, this assembly was corrected for mis-assembly errors as demonstrated by resolving a large collapsed repeat and by receiving higher scores by assembly evaluation tools. With the inclusion of PacBio data we were able to fill about 5 % of the optical mapped genome not covered by the Illumina data.

  3. Improved parameters metropolitan area network supported with all-optical network's technology

    Science.gov (United States)

    Gradkowska, Magdalena; Kalita, Mariusz

    2006-03-01

    The advantages of all-optical network's technics make them one of main elements of the metropolitan area networks. They enable different applications in high quality mulitimedia services and guarantee a constant and reliable access to the Internet. As the growing expansion of the Internet continues in an unpredictable direction, many new solutions are expected. The major challenge is the increasing demand for flexible, transparent and customised bandwidth services for both private and business customers.

  4. Optical power 1 × 7 splitter based on multicore fiber technology

    Science.gov (United States)

    Pytel, Anna; Napierała, Marek; Szostkiewicz, Łukasz; Ostrowski, Łukasz; Murawski, Michał; Mergo, Paweł; Nasiłowski, Tomasz

    2017-09-01

    Multicore and microstructured fibers open a new door for designing all-fiber telecom components. In this article we propose a design of an optical power splitter based on the phenomenon of power coupling in the tapered splice between a single-core (SMF-28) and a seven core fiber (MCF-7), which was originally developed for spatial division multiplexing telecommunication systems. Comprehensive numerical analysis is presented and backed up with an experimental demonstration.

  5. Optical biosensor technologies for molecular diagnostics at the point-of-care

    Science.gov (United States)

    Schotter, Joerg; Schrittwieser, Stefan; Muellner, Paul; Melnik, Eva; Hainberger, Rainer; Koppitsch, Guenther; Schrank, Franz; Soulantika, Katerina; Lentijo-Mozo, Sergio; Pelaz, Beatriz; Parak, Wolfgang; Ludwig, Frank; Dieckhoff, Jan

    2015-05-01

    Label-free optical schemes for molecular biosensing hold a strong promise for point-of-care applications in medical research and diagnostics. Apart from diagnostic requirements in terms of sensitivity, specificity, and multiplexing capability, also other aspects such as ease of use and manufacturability have to be considered in order to pave the way to a practical implementation. We present integrated optical waveguide as well as magnetic nanoparticle based molecular biosensor concepts that address these aspects. The integrated optical waveguide devices are based on low-loss photonic wires made of silicon nitride deposited by a CMOS compatible plasma-enhanced chemical vapor deposition (PECVD) process that allows for backend integration of waveguides on optoelectronic CMOS chips. The molecular detection principle relies on evanescent wave sensing in the 0.85 μm wavelength regime by means of Mach-Zehnder interferometers, which enables on-chip integration of silicon photodiodes and, thus, the realization of system-on-chip solutions. Our nanoparticle-based approach is based on optical observation of the dynamic response of functionalized magneticcore/ noble-metal-shell nanorods (`nanoprobes') to an externally applied time-varying magnetic field. As target molecules specifically bind to the surface of the nanoprobes, the observed dynamics of the nanoprobes changes, and the concentration of target molecules in the sample solution can be quantified. This approach is suitable for dynamic real-time measurements and only requires minimal sample preparation, thus presenting a highly promising point-of-care diagnostic system. In this paper, we present a prototype of a diagnostic device suitable for highly automated sample analysis by our nanoparticle-based approach.

  6. An Optical Fiber Viscometer Based on Long-Period Fiber Grating Technology and Capillary Tube Mechanism

    Directory of Open Access Journals (Sweden)

    Jian-Neng Wang

    2010-12-01

    Full Text Available This work addresses the development and assessment of a fiber optical viscometer using a simple and low-cost long-period fiber grating (LPFG level sensor and a capillary tube mechanism. Previous studies of optical viscosity sensors were conducted by using different optical sensing methods. The proposed optical viscometer consists of an LPFG sensor, a temperature-controlled chamber, and a cone-shaped reservoir where gravitational force could cause fluid to flow through the capillary tube. We focused on the use of LPFGs as level sensors and the wavelength shifts were not used to quantify the viscosity values of asphalt binders. When the LPFG sensor was immersed in the constant volume (100 mL AC-20 asphalt binder, a wavelength shift was observed and acquired using LabVIEW software and GPIB controller. The time spent between empty and 100 mL was calculated to determine the discharge time. We simultaneously measured the LPFG-induced discharge time and the transmission spectra both in hot air and AC-20 asphalt binder at five different temperatures, 60, 80, 100, 135, and 170 Celsius. An electromechanical rotational viscometer was also used to measure the viscosities, 0.15–213.80 Pa·s, of the same asphalt binder at the above five temperatures. A non-linear regression analysis was performed to convert LPFG-induced discharge time into viscosities. Comparative analysis shows that the LPFG-induced discharge time agreed well with the viscosities obtained from the rotational viscometer.

  7. Damage Resistant Optical Glasses for High Power Lasers: A Continuing Glass Science and Technology Challenge

    Energy Technology Data Exchange (ETDEWEB)

    Campbell, J H

    2002-08-28

    A major challenge in the development of optical glasses for high-power lasers is reducing or eliminating laser-induced damage to the interior (bulk) and the polished surface of the glass. Bulk laser damage in glass generally originates from inclusions. With the development of novel glass melting and forming processes it is now possible to make both fused silica and a suit of meta-phosphate laser glasses in large sizes ({approx}>0.5-lm diameter), free of inclusions and with high optical homogeneity ({approx} 10{sup -6}). Considerable attention also has been focused on improving the laser damage resistance to polished optical glass surfaces. Studies have shown that laser-induced damage to surfaces grows exponentially with the number of shots when illuminated with nano-second pulses at 351-nm above a given fluence threshold. A new approach for reducing and eliminating laser-induced surface damage relies on a series of post-polishing treatment steps. This damage improvement method is briefly reviewed.

  8. System technology for laser-assisted milling with tool integrated optics

    Science.gov (United States)

    Hermani, Jan-Patrick; Emonts, Michael; Brecher, Christian

    2013-02-01

    High strength metal alloys and ceramics offer a huge potential for increased efficiency (e. g. in engine components for aerospace or components for gas turbines). However, mass application is still hampered by cost- and time-consuming end-machining due to long processing times and high tool wear. Laser-induced heating shortly before machining can reduce the material strength and improve machinability significantly. The Fraunhofer IPT has developed and successfully realized a new approach for laser-assisted milling with spindle and tool integrated, co-rotating optics. The novel optical system inside the tool consists of one deflection prism to position the laser spot in front of the cutting insert and one focusing lens. Using a fiber laser with high beam quality the laser spot diameter can be precisely adjusted to the chip size. A high dynamic adaption of the laser power signal according to the engagement condition of the cutting tool was realized in order not to irradiate already machined work piece material. During the tool engagement the laser power is controlled in proportion to the current material removal rate, which has to be calculated continuously. The needed geometric values are generated by a CAD/CAM program and converted into a laser power signal by a real-time controller. The developed milling tool with integrated optics and the algorithm for laser power control enable a multi-axis laser-assisted machining of complex parts.

  9. Challenges in Ecohydrological Monitoring at Soil-Vegetation Interfaces: Exploiting the Potential for Fibre Optic Technologies

    Science.gov (United States)

    Chalari, A.; Ciocca, F.; Krause, S.; Hannah, D. M.; Blaen, P.; Coleman, T. I.; Mondanos, M.

    2015-12-01

    The Birmingham Institute of Forestry Research (BIFoR) is using Free-Air Carbon Enrichment (FACE) experiments to quantify the long-term impact and resilience of forests into rising atmospheric CO2 concentrations. The FACE campaign critically relies on a successful monitoring and understanding of the large variety of ecohydrological processes occurring across many interfaces, from deep soil to above the tree canopy. At the land-atmosphere interface, soil moisture and temperature are key variables to determine the heat and water exchanges, crucial to the vegetation dynamics as well as to groundwater recharge. Traditional solutions for monitoring soil moisture and temperature such as remote techniques and point sensors show limitations in fast acquisition rates and spatial coverage, respectively. Hence, spatial patterns and temporal dynamics of heat and water fluxes at this interface can only be monitored to a certain degree, limiting deeper knowledge in dynamically evolving systems (e.g. in impact of growing vegetation). Fibre optics Distributed Temperature Sensors (DTS) can measure soil temperatures at high spatiotemporal resolutions and accuracy, along kilometers of optical cable buried in the soil. Heat pulse methods applied to electrical elements embedded in the optical cable can be used to obtain the soil moisture. In July 2015 a monitoring system based on DTS has been installed in a recently forested hillslope at BIFoR in order to quantify high-resolution spatial patterns and high-frequency temporal dynamics of soil heat fluxes and soil moisture conditions. Therefore, 1500m of optical cables have been carefully deployed in three overlapped loops at 0.05m, 0.25m and 0.4m from the soil surface and an electrical system to send heat pulses along the optical cable has been developed. This paper discussed both, installation and design details along with first results of the soil moisture and temperature monitoring carried out since July 2015. Moreover, interpretations

  10. The time is right: proteome biology of stem cells.

    NARCIS (Netherlands)

    Whetton, A.D.; Williamson, A.J.K.; Krijgsveld, J.; Lee, B.H.; Lemischka, I.; Oh, S.; Pera, M.; Mummery, C.L.; Heck, A.J.R.

    2008-01-01

    In stem cell biology, there is a growing need for advanced technologies that may help to unravel the molecular mechanisms of self-renewal and differentiation. Proteomics, the comprehensive analysis of proteins, is such an emerging technique. To facilitate interactions between specialists in

  11. The time is right: proteome biology of stem cells.

    NARCIS (Netherlands)

    Whetton, A.D.; Williamson, A.J.K.; Krijgsveld, J.; Lee, B.H.; Lemischka, I.; Oh, S.; Pera, M.; Mummery, C.L.; Heck, A.J.R.

    2008-01-01

    In stem cell biology, there is a growing need for advanced technologies that may help to unravel the molecular mechanisms of self-renewal and differentiation. Proteomics, the comprehensive analysis of proteins, is such an emerging technique. To facilitate interactions between specialists in proteomi

  12. Application of MIMO technology for next-generation optical and millimeter-wave interconnects

    Science.gov (United States)

    Fan, Shu-Hao; Guidotti, Daniel; Chang, Gee-Kung

    2012-01-01

    Millimeter-wave wireless interconnects is an emerging technology for ultra-short-reach off-chip transmission, providing spatial flexibility and power-efficient high-speed data transportation. Integrated with carrier-over-fiber technology, we propose a low-phase-noise multi-wireless-transceiver architecture to improve the bit-error-rate performance of conventional wireless interconnects. Multiplexing schemes, including frequency division multiplexing, spatial multiplexing, and beam isolation, can be facilitated by carrier-over-fiber techniques. We introduce a potential application of the multi-input-multi-output high-speed analog multiplexing with open-loop analog circuits and digital feedback.

  13. Biomedical lab on glass slide for crystallo-optic diagnostics: high technology

    Science.gov (United States)

    Berg, Dmitri B.; Mintz, Rafail I.

    1997-05-01

    The unique analytic potential of biofluids crystallooptic diagnostics (COD) is determined by visualization of aggregation properties and molecular biofluid organization, that reflect an important information about functional state of separate systems as well as about the physiological status of the whole organism. Extraction, visualization and processing of the diagnostic information are supplied by the smart-technology. COD techniques experience in studies of bile, urine, liquor, tear, saliva, blood and other biological fluids is generalized: crystallooptic diagnosticums are the pool of analytical system 'Mesotest'. Combining of biofluids COD with the modern computer technologies transfer such methods into the category of intellectual prompts.

  14. Self-Raman Nd:YVO4 laser and electro-optic technology for space-based sodium lidar instrument

    Science.gov (United States)

    Krainak, Michael A.; Yu, Anthony W.; Janches, Diego; Jones, Sarah L.; Blagojevic, Branimir; Chen, Jeffrey

    2014-02-01

    We are developing a laser and electro-optic technology to remotely measure Sodium (Na) by adapting existing lidar technology with space flight heritage. The developed instrumentation will serve as the core for the planning of an Heliophysics mission targeted to study the composition and dynamics of Earth's mesosphere based on a spaceborne lidar that will measure the mesospheric Na layer. We present performance results from our diode-pumped tunable Q-switched self-Raman c-cut Nd:YVO4 laser with intra-cavity frequency doubling that produces multi-watt 589 nm wavelength output. The c-cut Nd:YVO4 laser has a fundamental wavelength that is tunable from 1063-1067 nm. A CW External Cavity diode laser is used as a injection seeder to provide single-frequency grating tunable output around 1066 nm. The injection-seeded self-Raman shifted Nd:VO4 laser is tuned across the sodium vapor D2 line at 589 nm. We will review technologies that provide strong leverage for the sodium lidar laser system with strong heritage from the Ice Cloud and Land Elevation Satellite-2 (ICESat-2) Advanced Topographic Laser Altimeter System (ATLAS). These include a space-qualified frequency-doubled 9W @ 532 nm wavelength Nd:YVO4 laser, a tandem interference filter temperature-stabilized fused-silica-etalon receiver and high-bandwidth photon-counting detectors.

  15. Self-Raman Nd:YVO4 Laser and Electro-Optic Technology for Space-Based Sodium Lidar Instrument

    Science.gov (United States)

    Krainak, Michael A.; Yu, Anthony W.; Janches, Diego; Jones, Sarah L.; Blagojevic, Branimir; Chen, Jeffrey

    2014-01-01

    We are developing a laser and electro-optic technology to remotely measure Sodium (Na) by adapting existing lidar technology with space flight heritage. The developed instrumentation will serve as the core for the planning of an Heliophysics mission targeted to study the composition and dynamics of Earth's mesosphere based on a spaceborne lidar that will measure the mesospheric Na layer. We present performance results from our diode-pumped tunable Q-switched self-Raman c-cut Nd:YVO4 laser with intra-cavity frequency doubling that produces multi-watt 589 nm wavelength output. The c-cut Nd:YVO4 laser has a fundamental wavelength that is tunable from 1063-1067 nanometers. A CW (Continuous Wave) External Cavity diode laser is used as a injection seeder to provide single-frequency grating tunable output around 1066 nanometers. The injection-seeded self-Raman shifted Nd:VO4 laser is tuned across the sodium vapor D2 line at 589 nanometers. We will review technologies that provide strong leverage for the sodium lidar laser system with strong heritage from the Ice Cloud and Land Elevation Satellite-2 (ICESat-2) Advanced Topographic Laser Altimeter System (ATLAS). These include a space-qualified frequency-doubled 9 watts-at-532-nanometer wavelength Nd:YVO4 laser, a tandem interference filter temperature-stabilized fused-silica-etalon receiver and high-bandwidth photon-counting detectors.

  16. Proteomics Development and Application for Bioforensics

    Energy Technology Data Exchange (ETDEWEB)

    Wahl, Karen L.; Wunschel, David S.; Clowers, Brian H.

    2010-09-15

    Proteomics is a relatively new scientific discipline dedicated to the comprehensive study of the protein composition of biological systems. While genomic sequencing is an invaluable tool for bioforensic sample identification, proteomics complements genomics in that the genes present in an organism code for the proteins that can be present in a microorganism. Many proteins are conserved for general identification while other protein expression varies with environment/growth state/growth conditions (i.e. not all proteins are expressed at any given time or condition) providing additional information beyond genomic analysis. This expression specificity and the relative stability of proteins with respect to genetic material make them attractive targets for microorganism identification and forensic applications to complement genomic approaches. Proteomic analysis depends upon the availability of genome sequences of the relevant organisms or their near relatives. The known amino acid sequences for potential proteins within the database can be compared to amino acid sequences of actual proteins present in a sample as determined with high mass accuracy by mass spectrometry for identification of the proteins in the sample. With the development of technology for rapid genome sequencing of organisms, the known protein database is growing, supporting improved identification of the proteins present in a sample. Recent developments in mass spectrometry instrumentation and microbial sequencing are leading to an increased growth in application of proteomics to microbiology, pathogen detection, disease diagnosis and microbial forensics as well as other biological disciplines. Mass spectrometry analysis does not require a priori knowledge of the sample or expected targets to gain meaningful.

  17. Measurement of Oil and Natural Gas Well Pad Enclosed Combustor Emissions Using Optical Remote Sensing Technologies

    Science.gov (United States)

    The U.S. Environmental Protection Agency (EPA), Office of Research and Development (ORD) and EPA Region 8 are collaborating under the EPA’s Regional Applied Research Effort (RARE) program to evaluate ground-based remote sensing technologies that could be used to characterize emis...

  18. Measurement of Oil and Gas Well Pad Enclosed Combustor Emissions Using Optical Remote Sensing Technologies

    Science.gov (United States)

    The U.S. EPA Office of Research and Development and U.S. EPA Region 8 are collaborating to investigate the impact of energy production under the EPA’s Regional Applied Research Effort (RARE) program. As part of this effort, a research study was conducted to evaluate technologies...

  19. Physics Teacher Candidates' Opinions on Fiber Optics and New Technologies in This Field

    Science.gov (United States)

    Çildir, Sema

    2016-01-01

    Factors such as innovations brought in by the developing technology, also rapidly changing social structures casted various roles to both the student and the teacher. Therefore, it is necessary to associate such knowledge acquired in courses with implications of the knowledge in our real lives and to constantly enrich course contents, namely to…

  20. Nanomechanical recognition of prognostic biomarker suPAR with DVD-ROM optical technology

    DEFF Research Database (Denmark)

    Bache, Michael; Bosco, Filippo; Brøgger, Anna Line

    2013-01-01

    In this work the use of a high-throughput nanomechanical detection system based on a DVD-ROM optical drive and cantilever sensors is presented for the detection of urokinase plasminogen activator receptor inflammatory biomarker (uPAR). Several large scale studies have linked elevated levels...... of soluble uPAR (suPAR) to infectious diseases, such as HIV, and certain types of cancer. Using hundreds of cantilevers and a DVD-based platform, cantilever deflection response from antibody–antigen recognition is investigated as a function of suPAR concentration. The goal is to provide a cheap and portable...