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Sample records for opah lampris guttatus

  1. Opah Tissue Samples Collected and Information Regarding Lampris spp. Obtained from Various Entities

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In order to determine variations in distribution of the newly discovered Lampris spp., numerous research institutions, observer programs, and museums were contacted...

  2. Longline Observer (HI & Am. Samoa) Opah Fin Clip Collection for Lampris spp. Distribution Study

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Data set containing information collected from the 1000+ fin clips collected by Hawaii & American Samoa Longline Observers that will be used to analyze the...

  3. On the occurrence of Lampris luna, Gmel. on the Dutch coast

    NARCIS (Netherlands)

    Lidth de Jeude, van Th.W.

    1889-01-01

    On Dec. 8th 1888 a large fish was washed ashore near Scheveningen, and was captured by two fishermen, who brought it to the Leyden Museum. They told us nobody in Scheveningen ever saw such a fish, and were very much surprised as we showed them a stuffed specimen of Lampris luna, captured at

  4. Oxygen-containing polycyclic aromatic hydrocarbons (OPAHs) in urban soils of Bratislava, Slovakia: Patterns, relation to PAHs and vertical distribution

    International Nuclear Information System (INIS)

    Musa Bandowe, Benjamin A.; Sobocka, Jaroslava; Wilcke, Wolfgang

    2011-01-01

    We determined concentrations, sources, and vertical distribution of OPAHs and PAHs in soils of Bratislava. The Σ14 OPAHs concentrations in surface soil horizons ranged 88-2692 ng g -1 and those of Σ34 PAHs 842-244,870 ng g -1 . The concentrations of the Σ9 carbonyl-OPAHs (r = 0.92, p = 0.0001) and the Σ5 hydroxyl-OPAHs (r = 0.73, p = 0.01) correlated significantly with Σ34 PAHs concentrations indicating the close association of OPAHs with parent-PAHs. OPAHs were quantitatively dominated by 9-fluorenone, 9,10-anthraquinone, 1-indanone and benzo[a]anthracene-7,12-dione. At several sites, individual carbonyl-OPAHs had higher concentrations than parent PAHs. The concentration ratios of several OPAHs to their parent-PAHs and contribution of the more soluble OPAHs (1-indanone and 9-fluorenone) to Σ14 OPAHs concentrations increased with soil depth suggesting that OPAHs were faster vertically transported in the study soils by leaching than PAHs which was supported by the correlation of subsoil:surface soil ratios of OPAH concentrations at several sites with K OW . - Research highlights: → Oxygenated polycyclic aromatic hydrocarbons (OPAHs) are closely associated with PAHs in all studied urban soils. → The concentrations of OPAHs in urban soils of Bratislava are similar as in other European and North American cities. → Concentrations of OPAHs are frequently higher than those of the corresponding parent-PAHs. → For 2-hydroxybenzaldehyde, 1-naphthaldehyde, 2-biphenylcarboxaldehyde and 1,8-naphthalic anhydride there are indications for abiotic or biological production. → The OPAHs are faster vertically transported in soils than their parent-PAHs. - OPAHs and PAHs in urban soils are closely associated but OPAHs are faster translocated than PAHs.

  5. Concentration and photochemistry of PAHs, NPAHs, and OPAHs and toxicity of PM2.5 during the Beijing Olympic Games.

    Science.gov (United States)

    Wang, Wentao; Jariyasopit, Narumol; Schrlau, Jill; Jia, Yuling; Tao, Shu; Yu, Tian-Wei; Dashwood, Roderick H; Zhang, Wei; Wang, Xuejun; Simonich, Staci L Massey

    2011-08-15

    Atmospheric particulate matter with diameter cells were also measured. Significant reductions in BC (45%), OC (31%), MW< 300 PAH (26-73%), MW 302 PAH (22-77%), NPAH (15-68%), and OPAH (25-53%) concentrations were measured during the source control and Olympic periods. However, the mutagenicity of the PM(2.5) was significantly reduced only during the Olympic period. The PAH, NPAH, and OPAH composition of the PM(2.5) was similar throughout the study, suggesting similar sources during the different periods. During the source control period, the parent PAH concentrations were correlated with NO, CO, and SO(2) concentrations, indicating that these PAHs were associated with both local and regional emissions. However, the NPAH and OPAH concentrations were only correlated with the NO concentrations, indicating that the NPAH and OPAH were primarily associated with local emissions. The relatively high 2-nitrofluoranthene/1-nitropyrene ratio (25-46) and 2-nitrofluoranthene/2-nitropyrene ratio (3.4-4.8), suggested a predominance of photochemical formation of NPAHs through OH-radical-initiated reactions in the atmosphere. On average, the ∑NPAH and ∑OPAH concentrations were 8% of the parent PAH concentrations, while the direct-acting mutagenicity (due to the NPAH and OPAH) was 200% higher than the indirect-acting mutagenicity (due to the PAH). This suggests that NPAH and OPAH make up a significant portion of the overall mutagenicity of PM(2.5) in Beijing.

  6. Inbreeding in Mimulus guttatus reduces visitation by bumble bee pollinators.

    Directory of Open Access Journals (Sweden)

    David E Carr

    Full Text Available Inbreeding in plants typically reduces individual fitness but may also alter ecological interactions. This study examined the effect of inbreeding in the mixed-mating annual Mimulus guttatus on visitation by pollinators (Bombus impatiens in greenhouse experiments. Previous studies of M. guttatus have shown that inbreeding reduced corolla size, flower number, and pollen quantity and quality. Using controlled crosses, we produced inbred and outbred families from three different M. guttatus populations. We recorded the plant genotypes that bees visited and the number of flowers probed per visit. In our first experiment, bees were 31% more likely to visit outbred plants than those selfed for one generation and 43% more likely to visit outbred plants than those selfed for two generations. Inbreeding had only a small effect on the number of flowers probed once bees arrived at a genotype. These differences were explained partially by differences in mean floral display and mean flower size, but even when these variables were controlled statistically, the effect of inbreeding remained large and significant. In a second experiment we quantified pollen viability from inbred and self plants. Bees were 37-54% more likely to visit outbred plants, depending on the population, even when controlling for floral display size. Pollen viability proved to be as important as floral display in predicting pollinator visitation in one population, but the overall explanatory power of a multiple regression model was weak. Our data suggested that bees use cues in addition to display size, flower size, and pollen reward quality in their discrimination of inbred plants. Discrimination against inbred plants could have effects on plant fitness and thereby reinforce selection for outcrossing. Inbreeding in plant populations could also reduce resource quality for pollinators, potentially resulting in negative effects on pollinator populations.

  7. Polycyclic Aromatic Hydrocarbon (PAH) and Oxygenated PAH (OPAH) Air–Water Exchange during the Deepwater Horizon Oil Spill

    Science.gov (United States)

    2015-01-01

    Passive sampling devices were used to measure air vapor and water dissolved phase concentrations of 33 polycyclic aromatic hydrocarbons (PAHs) and 22 oxygenated PAHs (OPAHs) at four Gulf of Mexico coastal sites prior to, during, and after shoreline oiling from the Deepwater Horizon oil spill (DWH). Measurements were taken at each site over a 13 month period, and flux across the water–air boundary was determined. This is the first report of vapor phase and flux of both PAHs and OPAHs during the DWH. Vapor phase sum PAH and OPAH concentrations ranged between 1 and 24 ng/m3 and 0.3 and 27 ng/m3, respectively. PAH and OPAH concentrations in air exhibited different spatial and temporal trends than in water, and air–water flux of 13 individual PAHs were strongly associated with the DWH incident. The largest PAH volatilizations occurred at the sites in Alabama and Mississippi in the summer, each nominally 10 000 ng/m2/day. Acenaphthene was the PAH with the highest observed volatilization rate of 6800 ng/m2/day in September 2010. This work represents additional evidence of the DWH incident contributing to air contamination, and provides one of the first quantitative air–water chemical flux determinations with passive sampling technology. PMID:25412353

  8. Polycyclic aromatic hydrocarbon (PAH) and oxygenated PAH (OPAH) air-water exchange during the deepwater horizon oil spill.

    Science.gov (United States)

    Tidwell, Lane G; Allan, Sarah E; O'Connell, Steven G; Hobbie, Kevin A; Smith, Brian W; Anderson, Kim A

    2015-01-06

    Passive sampling devices were used to measure air vapor and water dissolved phase concentrations of 33 polycyclic aromatic hydrocarbons (PAHs) and 22 oxygenated PAHs (OPAHs) at four Gulf of Mexico coastal sites prior to, during, and after shoreline oiling from the Deepwater Horizon oil spill (DWH). Measurements were taken at each site over a 13 month period, and flux across the water-air boundary was determined. This is the first report of vapor phase and flux of both PAHs and OPAHs during the DWH. Vapor phase sum PAH and OPAH concentrations ranged between 1 and 24 ng/m(3) and 0.3 and 27 ng/m(3), respectively. PAH and OPAH concentrations in air exhibited different spatial and temporal trends than in water, and air-water flux of 13 individual PAHs were strongly associated with the DWH incident. The largest PAH volatilizations occurred at the sites in Alabama and Mississippi in the summer, each nominally 10,000 ng/m(2)/day. Acenaphthene was the PAH with the highest observed volatilization rate of 6800 ng/m(2)/day in September 2010. This work represents additional evidence of the DWH incident contributing to air contamination, and provides one of the first quantitative air-water chemical flux determinations with passive sampling technology.

  9. Isolation and characterization of eight polymorphic microsatellites for the spotted spiny lobster, Panulirus guttatus

    Directory of Open Access Journals (Sweden)

    Nathan Truelove

    2016-01-01

    Full Text Available Microsatellite sequences were isolated from enriched genomic libraries of the spotted spiny lobster, Panulirus guttatus using 454 pyrosequencing. Twenty-nine previously developed polymerase chain reaction primer pairs of Panulirus argus microsatellite loci were also tested for cross-species amplification in Panulirus guttatus. In total, eight consistently amplifying, and polymorphic loci were characterized for 57 individuals collected in the Florida Keys and Bermuda. The number of alleles per locus ranged from 8 to 20 and observed heterozygosities ranged from 0.409 to 0.958. Significant deviations from Hardy–Weinberg equilibrium were found in one locus from Florida and three loci from Bermuda. Quality control testing indicated that all loci were easy to score, highly polymorphic and showed no evidence of linkage disequilibrium. Null alleles were detected in three loci with moderate frequencies ranging from (20% to 22%. These eight microsatellites provide novel molecular markers for future conservation genetics research of P. guttatus.

  10. Atmospheric PAHs, NPAHs, and OPAHs at an urban, mountainous, and marine sites in Northern China: Molecular composition, sources, and ageing

    Science.gov (United States)

    Zhang, Junmei; Yang, Lingxiao; Mellouki, Abdelwahid; Chen, Jianmin; Chen, Xiangfeng; Gao, Ying; Jiang, Pan; Li, Yanyan; Yu, Hao; Wang, Wenxing

    2018-01-01

    18 gaseous and particulate polycyclic aromatic hydrocarbons (PAHs), 16 nitro-derivative (NPAHs), and 7 oxy-derivative (OPAHs) were analyzed by Gas Chromatography-Mass Spectrometry (GC-MS) at three locations in Northern China, an urban site (Jinan), a marine site (Tuoji island), and a mountain site (Mt. Tai). The combined gas and particulate concentrations of 18 PAHs, 16 NPAHs, and 7 OPAHs were highest at the urban site (305.91, 2.80, and 9.05 ng/m3, respectively) and lowest at the mountain location (37.83, 0.27, and 1.59 ng/m3, respectively). A noticeable increase in the high molecular weight PAHs was observed during polluted conditions compared to clean conditions. Diagnostic ratios clearly demonstrated that coal/biomass combustion was the major PAH source in Northern China. The particulate PAHs were the most aged at the mountain site due to long-distance atmospheric transport. The formation rate of NPAHs was most efficient at the mountain location and during heavily polluted days at the urban and marine sites. In addition, the main formation pathway for NPAHs was through the OH initiated secondary reaction. NO3 radicals most significantly contributed to the NPAHs formation at night, during clear weather, and at the mountain site. The logKp value was lowest at the urban site for most individual compounds and highest at the mountain site. Higher logKp was found for NPAHs and OPAHs compared with their corresponding parent PAHs. The linear regression of logKp vs logPL0 at the three sites suggested that the gas-particle partitioning of PAHs might be in non-equilibrium.

  11. Particle size distribution of nitrated and oxygenated polycyclic aromatic hydrocarbons (NPAHs and OPAHs on traffic and suburban sites of a European megacity: Paris (France

    Directory of Open Access Journals (Sweden)

    J. Ringuet

    2012-09-01

    Full Text Available The size distribution of particulate nitrated and oxygenated polycyclic aromatic hydrocarbons (NPAHs and OPAHs was determined during two field campaigns at a traffic site in summer 2010 and at a suburban site during the MEGAPOLI (Megacities: Emissions, urban, regional and Global Atmospheric POLlution and climate effects, and Integrated tools for assessment and mitigation experiment in summer 2009. Both, OPAHs and NPAHs were strongly associated (>85% to fine particles (Dp< 2.5 μm increasing the interest of their study on a sanitary point of view. Results showed really different NPAH and OPAH particle size distributions between both sites. At traffic site, clearly bimodal (notably for NPAHs particle size distributions (Dp = 0.14 and 1.4 μm were observed, while the particle size distributions were more scattered at the suburban site, especially for OPAHs. Bimodal particle size distribution observed at traffic site for the NPAH could be assigned to the vehicle emissions and the particle resuspension. Broadest distribution observed at the suburban site could be attributed to the mass transfer of compounds by volatilization/sorption processes during the transport of particles in the atmosphere. Results also showed that the combination of the study of particle size distributions applied to marker compounds (primary: 1-nitropyrene; secondary: 2-nitrofluoranthene and to NPAH or OPAH chemical profiles bring some indications on their primary and/or secondary origin. Indeed, 1,4-anthraquinone seemed only primary emitted by vehicles while 7-nitrobenz[a]anthracene, benz[a]antracen7,12-dione and benzo[b]fluorenone seemed secondarily formed in the atmosphere.

  12. Within and between generation phenotypic plasticity in trichome density of Mimulus guttatus.

    Science.gov (United States)

    Holeski, L M

    2007-11-01

    Mimulus guttatus (yellow monkeyflower) frequently produce glandular trichomes, a trait that may resist herbivory. Constitutive production of trichomes is variable both within and among populations of M. guttatus and most of this variation is genetic. This study demonstrates that damage on early leaves can induce increased trichome production on later leaves, a plastic response that is likely adaptive. Moreover, this study shows that this induction can be maternally transmitted, increasing trichome density in progeny before they experience herbivory. This transgenerational response must involve a yet undescribed epigenetic mechanism. These experiments also show genetic variation among plants in the capacity for both within and between plant generation induction. Despite the clear evolutionary importance of variation in constitutive and induced herbivory-resistance traits, few other studies have noted genetic variation in both within a plant species.

  13. Helminth parasite communities of spotted rose snapper Lutjanus guttatus from the Mexican Pacific

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    Morales-Serna F. N.

    2017-09-01

    Full Text Available The helminth communities of L. guttatus from Mazatlan Bay (MB and Banderas Bay (BB, on the Pacific coast of Mexico, were studied during two consecutive years. A total of 536 fish were collected and 19 parasite taxa registered (six digeneans, two cestodes, nine nematodes, and two monogeneans. Infection levels of common helminth species (Helicometrina nimia, Siphodera vinaledwardsii, Tetraphyllidea gen. sp., Pseudoterranova sp., Ancyrocephalidae gen. sp. and Microcotyloides incisa as well as the infracommunity indices varied significantly between MB and BB, and among dry and rainy seasons; however, no clear seasonal patterns were observed. Pseudoterranova larvae appeared frequently in MB, possibly because of the presence of the California sea lion in this locality. Similarity analysis did not show a clear separation of parasite species composition between both localities, which suggest that fish samples came from a single population of L. guttatus.

  14. An ultraviolet floral polymorphism associated with life history drives pollinator discrimination in Mimulus guttatus.

    Science.gov (United States)

    Peterson, Megan L; Miller, Timothy J; Kay, Kathleen M

    2015-03-01

    • Ultraviolet (UV) floral patterns are common in angiosperms and mediate pollinator attraction, efficiency, and constancy. UV patterns may vary within species, yet are cryptic to human observers. Thus, few studies have explicitly described the distribution or ecological significance of intraspecific variation in UV floral patterning. Here, we describe the geographic distribution and pattern of inheritance of a UV polymorphism in the model plant species Mimulus guttatus (Phrymaceae). We then test whether naturally occurring UV phenotypes influence pollinator interactions within M. guttatus.• We document UV patterns in 18 annual and 19 perennial populations and test whether UV pattern is associated with life history. To examine the pattern of inheritance, we conducted crosses within and between UV phenotypes. Finally, we tested whether bee pollinators discriminate among naturally occurring UV phenotypes in two settings: wild bee communities and captive Bombus impatiens.• Within M. guttatus, perennial populations exhibit a small bulls-eye pattern, whereas a bilaterally symmetric runway pattern occurs mainly in annual populations. Inheritance of UV patterning is consistent with a single-locus Mendelian model in which the runway phenotype is dominant. Bee pollinators discriminate against unfamiliar UV patterns in both natural and controlled settings.• We describe a widespread UV polymorphism associated with life history divergence within Mimulus guttatus. UV pattern influences pollinator visitation and should be considered when estimating reproductive barriers between life history ecotypes. This work develops a new system to investigate the ecology and evolution of UV floral patterning in a species with extensive genomic resources. © 2015 Botanical Society of America, Inc.

  15. Disruption of endosperm development is a major cause of hybrid seed inviability between Mimulus guttatus and Mimulus nudatus.

    Science.gov (United States)

    Oneal, Elen; Willis, John H; Franks, Robert G

    2016-05-01

    Divergence of developmental mechanisms within populations could lead to hybrid developmental failure, and might be a factor driving speciation in angiosperms. We investigate patterns of endosperm and embryo development in Mimulus guttatus and the closely related, serpentine endemic Mimulus nudatus, and compare them to those of reciprocal hybrid seed. We address whether disruption in hybrid seed development is the primary source of reproductive isolation between these sympatric taxa. M. guttatus and M. nudatus differ in the pattern and timing of endosperm and embryo development. Some hybrid seeds exhibit early disruption of endosperm development and are completely inviable, while others develop relatively normally at first, but later exhibit impaired endosperm proliferation and low germination success. These developmental patterns are reflected in mature hybrid seeds, which are either small and flat (indicating little to no endosperm) or shriveled (indicating reduced endosperm volume). Hybrid seed inviability forms a potent reproductive barrier between M. guttatus and M. nudatus. We shed light on the extent of developmental variation between closely related species within the M. guttatus species complex, an important ecological model system, and provide a partial mechanism for the hybrid barrier between M. guttatus and M. nudatus. © 2016 The Authors. New Phytologist © 2016 New Phytologist Trust.

  16. Indoor/outdoor relationships, sources and cancer risk assessment of NPAHs and OPAHs in PM2.5 at urban and suburban hotels in Jinan, China

    Science.gov (United States)

    Li, Yanyan; Yang, Lingxiao; Chen, Xiangfeng; Jiang, Pan; Gao, Ying; Zhang, Junmei; Yu, Hao; Wang, Wenxing

    2018-06-01

    Paired indoor and outdoor measurements of 16 NPAHs and 5 OPAHs in PM2.5 were conducted at urban and suburban sites during January 2016 in Jinan, China. The concentrations of both indoor and outdoor NPAHs and OPAHs were higher at the urban site compared with the suburban site. 9N-ANT (16-42%), 2+3N-FLA (15-51%), 2N-PYR (6-20%), and 1N-PYR (4-6%) were the dominant NPAHs at all sites, and 9-FO (61-81%) was the most abundant OPAHs. Solid fuel combustion, motor vehicle exhausts, and secondary generation were the main sources of the PAH derivatives in this study area. The I/O ratios of 90% of NPAHs and OPAHs at the first urban indoor site (abbreviated as URI1, Green Tree Inn) and the suburban indoor site (abbreviated as SUI, the Seven Star Hotel) were Hotel), the I/O ratios of 2- and 3-ring NPAHs and OPAHs were >1.00, which was likely due to cooking activities occurring near the measurement site. Measurements of outdoor 2+3N-FLA/1N-PYR revealed mainly primary emission at the urban site and secondary sources at the suburban site, the average ratios were 3.76 and 12.22, respectively. The average ratio of 2+3N-FLA/2N-PYR at all sites was 3.3, indicating that the OH-initiated reaction was the dominant secondary formation pathway. Nighttime ratios of 2+3N-FLA/1N-PYR were significantly higher than the daytime ratios at all sites. The difference was especially pronounced during heavily polluted conditions at the suburban site, which suggests that heavy pollution and nighttime conditions promote secondary production. Additionally, the cancer risk was highest in urban outdoor (abbreviated as URO) when the population expose to the level as the outdoor air in the urban. The risk suggested that adults may be at a higher cancer risk.

  17. Spotted black snake (Pseudechis guttatus) envenomation in a maned wolf (Chrysocyon brachyurus).

    Science.gov (United States)

    Portas, Timothy J; Montali, Richard J

    2007-09-01

    Envenomation by a spotted black snake (Pseudechis guttatus), following multiple bites on the buccal mucosa of a captive maned wolf (Chrysocyon brachyurus), caused the animal's collapse, hemolysis, rhabdomyolysis, local tissue necrosis, hepatic and renal failure, and subsequent death. The wolf died despite intensive supportive care including antivenom administration, fluid support, and a blood transfusion. Gross necropsy findings included myocardial and intestinal hemorrhage, pulmonary congestion, hepatomegaly, and splenomegaly. Microscopic examination of formalin-fixed tissues demonstrated pulmonary and abdominal visceral hemorrhage, acute nephrosis with casts, multifocal hepatic necrosis, and splenic congestion.

  18. Cultivo del pargo de la mancha Lutjanus guttatus (pisces: Lutjanidae en jaulas flotantes.

    Directory of Open Access Journals (Sweden)

    Ricardo Gutiérrez Vargas

    2016-03-01

    Full Text Available En dos ensayos paralelos realizados frente a Playa Pájaros, en el Golfo de Nicoya, se engordaron pargos manchados (Lutjanus guttatus obtenidos del medio hasta 275 y 485 g, respectivamente, usando fauna de descarte obtenida de barcos camaroneros. La tasa de crecimiento fue de 1,87 y 1,7 g/día, respectivamente, el factor de conversión fue de 7,88 (alimento húmedo o 1,77 (alimento seco. La mortalidad se estimó en un 6% en todo el experimento. Se calcularon los costos de alimentación usando la fauna de descarte.

  19. Francisella marina sp. nov., etiologic agent of systemic disease in cultured spotted rose snapper (Lutjanus guttatus) in Central America

    Science.gov (United States)

    Historically, piscine francisellosis in various warm, temperate and coldwater fish hosts has been attributed to Francisella noatunensis. From 2015-2016, an undescribed Francisella sp. was recovered during mortality events in cultured spotted rose snapper (Lutjanus guttatus) off the Pacific coast of ...

  20. Gene expression plasticity resulting from parental leaf damage in Mimulus guttatus.

    Science.gov (United States)

    Colicchio, Jack M; Monnahan, Patrick J; Kelly, John K; Hileman, Lena C

    2015-01-01

    Leaf trichome density in Mimulus guttatus can be altered by the parental environment. In this study, we compared global gene expression patterns in progeny of damaged and control plants. Significant differences in gene expression probably explain the observed trichome response, and identify additional responsive pathways. Using whole transcriptome RNA sequencing, we estimated differential gene expression between isogenic seedlings whose parents had, or had not, been subject to leaf damage. We identified over 900 genes that were differentially expressed in response to parental wounding. These genes clustered into groups involved in cell wall and cell membrane development, stress response pathways, and secondary metabolism. Gene expression is modified as a consequence of the parental environment in a targeted way that probably alters multiple developmental pathways, and may increase progeny fitness if they experience environments similar to that of their parents. © 2014 The Authors. New Phytologist © 2014 New Phytologist Trust.

  1. Crecimiento de juveniles de pargo mancha (Lutjanus guttatus utilizando alimento granulado en condiciones de laboratorio.

    Directory of Open Access Journals (Sweden)

    Oscar Olivares Paulette

    2016-03-01

    Full Text Available El crecimiento de juveniles de pargo mancha (Lutjanus guttatus, peso inicial 42g, coeficiente de variación 13,8%, alimentados con alimento granulado, se evaluó en dependencia de la ración por un período de 14 días: Se aplicaron 5 tasas de alimentación entre 0 y 5% del peso corporal/día. La tasa de crecimiento específica aumentó desde valores negativos en ayunas (-0,32% PC/día hasta un máximo de 2,05% PC/día. La tasa óptima de crecimiento se estimó en 1,09% PC/día. El factor de conversión en condiciones de crecimiento óptimo y máximo fue de 0,94 y 1,86, respectivamente.

  2. Estado actual del cultivo de larvas del pargo flamenco (Lutjanus guttatus

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    María Isabel Abdo-de la Parra

    2015-07-01

    Full Text Available El pargo flamenco (Lutjanus guttatus es un pez marino con alta demanda en los mercados de algunos países de Latinoamérica. Debido a su importancia se inició su cultivo en jaulas flotantes usando juveniles silvestres. A partir de la década pasada se iniciaron los primeros estudios para lograr su reproducción en cautiverio y la producción masiva de juveniles que puedan sustentar el cultivo completo. El presente trabajo presenta los resultados obtenidos hasta la fecha sobre desove, manejo e incubación de huevos y protocolos de larvicultura del pargo flamenco en Latinoamérica.

  3. A Simulated Heat Wave Has Diverse Effects on Immune Function and Oxidative Physiology in the Corn Snake (Pantherophis guttatus).

    Science.gov (United States)

    Stahlschmidt, Z R; French, S S; Ahn, A; Webb, A; Butler, M W

    Animals will continue to encounter increasingly warm environments, including more frequent and intense heat waves. Yet the physiological consequences of heat waves remain equivocal, potentially because of variation in adaptive plasticity (reversible acclimation) and/or aspects of experimental design. Thus, we measured a suite of physiological variables in the corn snake (Pantherophis guttatus) after exposure to field-parameterized, fluctuating temperature regimes (moderate temperature and heat wave treatments) to address two hypotheses: (1) a heat wave causes physiological stress, and (2) thermal performance of immune function exhibits adaptive plasticity in response to a heat wave. We found little support for our first hypothesis because a simulated heat wave had a negative effect on body mass, but it also reduced oxidative damage and did not affect peak performance of three immune metrics. Likewise, we found only partial support for our second hypothesis. After exposure to a simulated heat wave, P. guttatus exhibited greater performance breadth and reduced temperature specialization (the standardized difference between peak performance and performance breadth) for only one of three immune metrics and did so in a sex-dependent manner. Further, a simulated heat wave did not elicit greater performance of any immune metric at higher temperatures. Yet a heat wave likely reduced innate immune function in P. guttatus because each metric of innate immune performance in this species (as in most vertebrates) was lower at elevated temperatures. Together with previous research, our study indicates that a heat wave may have complex, modest, and even positive physiological effects in some taxa.

  4. Molecular phylogeny and diversification of a widespread Neotropical rainforest bird group: The Buff-throated Woodcreeper complex, Xiphorhynchus guttatus/susurrans (Aves: Dendrocolaptidae).

    Science.gov (United States)

    Rocha, Tainá C; Sequeira, Fernando; Aleixo, Alexandre; Rêgo, Péricles S; Sampaio, Iracilda; Schneider, Horacio; Vallinoto, Marcelo

    2015-04-01

    The genus Xiphorhynchus is a species rich avian group widely distributed in Neotropical forests of Central and South America. Although recent molecular studies have improved our understanding of the spatial patterns of genetic diversity in some species of this genus, most are still poorly known, including their taxonomy. Here, we address the historical diversification and phylogenetic relationships of the X. guttatus/susurrans complex, using data from two mitochondrial (cyt b and ND2) and one nuclear (β-fibint7) genes. Phylogenetic relationships were inferred with both gene trees and a Bayesian-based species tree under a coalescent framework (∗BEAST). With exception of the nuclear β-fibint7 gene that produced an unresolved tree, both mtDNA and the species tree showed a similar topology and were congruent in recovering five main clades with high statistical support. These clades, however, are not fully concordant with traditional delimitation of some X. guttatus subspecies, since X. g. polystictus, X. g. guttatus, and X. g. connectens are not supported as distinct clades. Interestingly, these three taxa are more closely related to the mostly trans-Andean X. susurrans than the other southern and western Amazonian subspecies of X. guttatus, which constitutes a paraphyletic species. Timing estimates based on the species tree indicated that diversification in X. guttatus occurred between the end of the Pliocene and early Pleistocene, likely associated with the formation of the modern Amazon River and its main southern tributaries (Xingu, Tocantins, and Madeira), in addition to climate-induced changes in the distribution of rainforest biomes. Our study supports with an enlarged dataset a previous proposal for recognizing at least three species level taxa in the X. guttatus/susurrans complex: X. susurrans, X. guttatus, and X. guttatoides. Copyright © 2015 Elsevier Inc. All rights reserved.

  5. A Segregating Inversion Generates Fitness Variation in Yellow Monkeyflower (Mimulus guttatus)

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    Fishman, Lila; Kelly, John K.; Willis, John H.

    2016-01-01

    Polymorphic chromosomal rearrangements can bind hundreds of genes into single genetic loci with diverse effects. Rearrangements are often associated with local adaptation and speciation and may also be an important component of genetic variation within populations. We genetically and phenotypically characterize a segregating inversion (inv6) in the Iron Mountain (IM) population of Mimulus guttatus (yellow monkeyflower). We initially mapped inv6 as a region of recombination suppression in three F2 populations resulting from crosses among IM plants. In each case, the F1 parent was heterozygous for a derived haplotype, homogenous across markers spanning over 5 Mb of chromsome 6. In the three F2 populations, inv6 reduced male and female fitness components. In addition, inv6 carriers suffered an ∼30% loss of pollen viability in the field. Despite these costs, inv6 exists at moderate frequency (∼8%) in the natural population, suggesting counterbalancing fitness benefits that maintain the polymorphism. Across 4 years of monitoring in the field, inv6 had an overall significant positive effect on seed production (lifetime female fitness) of carriers. This benefit was particularly strong in harsh years and may be mediated (in part) by strong positive effects on flower production. These data suggest that opposing fitness effects maintain an intermediate frequency, and as a consequence, inv6 generates inbreeding depression and high genetic variance. We discuss these findings in relation to the theory of inbreeding depression and the maintenance of fitness variation. PMID:26868767

  6. Adaptive divergence in the monkey flower Mimulus guttatus is maintained by a chromosomal inversion.

    Science.gov (United States)

    Twyford, Alex D; Friedman, Jannice

    2015-06-01

    Organisms exhibit an incredible diversity of life history strategies as adaptive responses to environmental variation. The establishment of novel life history strategies involves multilocus polymorphisms, which will be challenging to establish in the face of gene flow and recombination. Theory predicts that adaptive allelic combinations may be maintained and spread if they occur in genomic regions of reduced recombination, such as chromosomal inversion polymorphisms, yet empirical support for this prediction is lacking. Here, we use genomic data to investigate the evolution of divergent adaptive ecotypes of the yellow monkey flower Mimulus guttatus. We show that a large chromosomal inversion polymorphism is the major region of divergence between geographically widespread annual and perennial ecotypes. In contrast, ∼40,000 single nucleotide polymorphisms in collinear regions of the genome show no signal of life history, revealing genomic patterns of diversity have been shaped by localized homogenizing gene flow and large-scale Pleistocene range expansion. Our results provide evidence for an inversion capturing and protecting loci involved in local adaptation, while also explaining how adaptive divergence can occur with gene flow. © 2015 The Author(s). Evolution published by Wiley Periodicals, Inc. on behalf of The Society for the Study of Evolution.

  7. Transgenerational plasticity is sex-dependent and persistent in yellow monkeyflower (Mimulus guttatus).

    Science.gov (United States)

    Akkerman, Kayla C; Sattarin, Arash; Kelly, John K; Scoville, Alison G

    2016-04-01

    Transgenerational phenotypic plasticity, whereby environmental cues experienced by parents alter the phenotype of their progeny, has now been documented in diverse organisms. Transmission of environmentally determined responses is known to occur through both maternal and paternal gametes, but the underlying mechanisms have rarely been compared. In addition, the persistence of induction over multiple generations appears to vary widely, but has been characterized for relatively few systems. Yellow monkeyflower ( Mimulus guttatus ) is known to exhibit transgenerational induction of increased glandular trichome production in response to simulated insect damage. Here, we test for differences between maternal and paternal transmission of this response and examine its persistence over five generations following damage. Maternal and paternal damage resulted in similar and apparently additive increases in progeny trichome production. Treatment of germinating seeds with the genome-wide demethylating agent 5-azacytidine erased the effect of maternal but not paternal damage. The number of glandular trichomes remained elevated for three generations following damage. These results indicate that transgenerational transmission occurs through both maternal and paternal germ lines, but that they differ in the proximate mechanism of epigenetic inheritance. Our results also indicate that a wounding response can persist for multiple generations in the absence of subsequent damage.

  8. Hábitos alimentarios de los peces Lutjanus peru y Lutjanus guttatus (Pisces:Lutjanidaeen Guerrero,México

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    Agustín A Rojas-Herrera

    2004-12-01

    Full Text Available Se analiza la composición de la dieta del huachinango (Lutjanus peru y del flamenco (Lutjanus guttatus en la costa de Guerrero,México.Los ejemplares se obtuvieron mensualmente de las capturas comerciales en tres regiones de pesca y presentaron intervalos de talla comprendidos entre 130 y 684 mm de longitud horquilla (LHpara el caso de L.peru ,y de 120 a 550 mm para L. guttatus .A partir del número y del peso de los distintos componentes alimentarios,identificados hasta el taxon más bajo posible,se calcularon los porcentajes numéricos (%N,gravimétricos (%Py de frecuencia de ocurrencia (%FOque fueron sintetizados como valores de importancia relativa.En los estómagos de L.peru se identificaron 68 ítems alimentarios dentro de los cuales predominan los peces (%P =50.9,los crustáceos (%P =35.6y los moluscos (%P =7.2mientras que el espectro alimentario de L.guttatus estuvo integrado por 88 componentes que incluyeron principalmente peces (%P =50.8y crustáceos (%P =43.4.Ambas especies son depredadoras generalistas,con un amplio espectro de presas.Los valores de los índices de traslape de las dietas de estas especies sugieren que no existe un alto grado de competencia intraespecífica por el alimento.Con el fin de encontrar similitudes en la dieta de estos lutjánidos en varias localidades de México y Costa Rica,se realizó un análisis de conglomerados con los valores de importancia relativa de las presas,publicados en varios trabajos.Se encontró más afinidad en la dieta de aquellas especies que habitan en una misma localidad, que entre organismos de la misma especie distribuidos en diferentes zonas.Se infiere que la disponibilidad de las presas,más que la selectividad por el alimento,determina la dieta de estas especies.Feeding habits of the fishes Lutjanus peru and Lutjanus guttatus (Pisces:Lutjanidaeof Guerrero, México.Diet composition of the Pacific snapper (Lutjanus peru 130-684 mm fork length (FLand the spotted snapper (Lutjanus

  9. Immunologic responses in corn snakes (Pantherophis guttatus) after experimentally induced infection with ferlaviruses.

    Science.gov (United States)

    Neul, Annkatrin; Schrödl, Wieland; Marschang, Rachel E; Bjick, Tina; Truyen, Uwe; von Buttlar, Heiner; Pees, Michael

    2017-04-01

    OBJECTIVE To measure immunologic responses of snakes after experimentally induced infection with ferlaviruses. ANIMALS 42 adult corn snakes (Pantherophis guttatus) of both sexes. PROCEDURES Snakes were inoculated intratracheally with genogroup A (n = 12), B (12), or C (12) ferlavirus (infected groups) or cell-culture supernatant (6; control group) on day 0. Three snakes from each infected group were euthanized on days 4, 16, 28, and 49, and 3 snakes from the control group were euthanized on day 49. Blood samples were collected from live snakes on days -6 (baseline), 4, 16, 28, and 49. Hematologic tests were performed and humoral responses assessed via hemagglutination-inhibition assays and ELISAs. Following euthanasia, gross pathological and histologic evaluations and virus detection were performed. RESULTS Severity of clinical signs of and immunologic responses to ferlavirus infection differed among snake groups. Hematologic values, particularly WBC and monocyte counts, increased between days 4 and 16 after infection. A humoral response was identified between days 16 and 28. Serum IgM concentrations increased from baseline earlier than IgY concentrations, but the IgY relative increase was higher at the end of the study. The hemagglutination-inhibition assay revealed that the strongest reactions in all infected groups were against the strain with which they had been infected. Snakes infected with genogroup A ferlavirus had the strongest immune response, whereas those infected with genogroup B had the weakest responses. CONCLUSIONS AND CLINICAL RELEVANCE Results of this experimental study suggested that the ferlavirus strain with the highest virulence induced the weakest immune response in snakes.

  10. Reproducción y crecimiento del pargo mancha Lutjanus guttatus (Pisces: Lutjanidae en el Golfo de Nicoya, Costa Rica

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    Rosa L Soto Rojas

    2009-06-01

    Full Text Available Una de las pesquerías más importantes en el Golfo de Nicoya es la del pargo mancha (Lutjanus guttatus; su captura se realiza con diversas artes y principalmente por la flota artesanal. Estudiamos especímenes de la captura comercial artesanal entre el 2002 y 2006. Se analizaron las relaciones morfométricas para aplicar la ecuación P = aLb; el análisis del estado de madurez gonadal se hizo macroscópicamente; se determinó la edad a través de la lectura de anillos anuales de los otolitos sagitales y los parámetros de crecimiento fueron aplicados en la ecuación de von Bertalanffy: L (t = * [1-exp (-K*(t-t0]. La relación longitud total-peso total es y = 0.0236x 2.8153 y longitud total-peso eviscerado y = 0.0216x2.8129; las relaciones simplificadas correspondientes fueron y = 0.0173x3 y y = 0.0162x3. La reproducción es todo el año con dos picos en marzo y setiembre (época seca y lluviosa, respectivamente. La proporción macho-hembra es 1:1. Se generó para la población del Golfo de Nicoya una clave edad-talla donde su utilidad se presenta como adecuada hasta los 6 años de edad. La curva de crecimiento von Bertalanffy es L (t=65,9(1-e -0,13(t+2,66.Reproduction and growth of the fish Lutjanus guttatus (Pisces: Lutjanidae in the Gulf of Nicoya, Costa Rica. The fish Lutjanus guttatus is important in the fisheries of Golfo de Nicoya, Costa Rica where they are captured with varied gear mainly by the artisanal fleet. We measured specimens from the commercial catch of 2002-2006. Gonadal state was determined macroscopically and age with otoliths The total length-total weight relationship was y = 0.0236x2.8153 and total length-eviscerated weight y = 0.0216x2.8129. Simplified relationships were y = 0.0173x3 and y = 0.0162x3. There is year-round reproduction with peaks in March (dry season and September (rainy season. Male-female sexual ratio was 1:1. The age-length key for the gulf shows availability until the 6 years of age. The von Bertalanffy

  11. Expression of the melatonin receptor Mel(1c) in neural tissues of the reef fish Siganus guttatus.

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    Park, Yong-Ju; Park, Ji-Gweon; Jeong, Hyung-Bok; Takeuchi, Yuki; Kim, Se-Jae; Lee, Young-Don; Takemura, Akihiro

    2007-05-01

    The golden rabbitfish, Siganus guttatus, is a reef fish exhibiting a restricted lunar-related rhythm in behavior and reproduction. Here, to understand the circadian rhythm of this lunar-synchronized spawner, a melatonin receptor subtype-Mel(1c)-was cloned. The full-length Mel(1c) melatonin receptor cDNA comprised 1747 bp with a single open reading frame (1062 bp) that encodes a 353-amino acid protein, which included 7 presumed transmembrane domains. Real-time PCR revealed high Mel(1c) mRNA expression in the retina and brain but not in the peripheral tissues. When the fish were reared under light/dark (LD 12:12) conditions, Mel(1c) mRNA in the retina and brain was expressed with daily variations and increased during nighttime. Similar variations were noted under constant conditions, suggesting that Mel(1c) mRNA expression is regulated by the circadian clock system. Daily variations of Mel(1c) mRNA expression with a peak at zeitgeber time (ZT) 12 were observed in the cultured pineal gland under LD 12:12. Exposure of the cultured pineal gland to light at ZT17 resulted in a decrease in Mel(1c) mRNA expression. When light was obstructed at ZT5, the opposite effect was obtained. These results suggest that light exerts certain effects on Mel(1c) mRNA expression directly or indirectly through melatonin actions.

  12. Morphology and Morphometry of the Lung in Corn Snakes (Pantherophis guttatus) Infected with Three Different Strains of Ferlavirus.

    Science.gov (United States)

    Starck, J M; Neul, A; Schmidt, V; Kolb, T; Franz-Guess, S; Balcecean, D; Pees, M

    2017-05-01

    Ophidian paramyxovirus (ferlavirus) is a global threat to reptilian sauropsids in herpetological collections, with occasional but fatal effects. This study characterizes the effects of three different genetic strains of ferlavirus on the dynamic changes of histology and morphometry of the lung of corn snakes (Pantherophis guttatus). Lungs from 42 corn snakes were either sham-infected or infected experimentally under standardized conditions. From 4 to 49 days after intratracheal inoculation, the lungs were examined qualitatively and quantitatively. Progressive microscopical changes were seen in the lung. Initially, increased numbers of heterophils were observed in the interstitium followed by proliferation and vacuolation of epithelial cells lining faveoli. Electron microscopy revealed loss of type-I pneumocytes, hyperplasia of type-II pneumocytes, and interstitial infiltrates of heterophils and mononuclear cells. With progression of disease the respiratory epithelium was initially overgrown by transformed type-II pneumocytes and later became multilayered. The results of the study suggest that the respiratory capacity of the lungs declines with disease development. The dynamics of disease development and histopathology differed in snakes infected with different ferlavirus genogroups. Animals infected with virus genogroup B developed histopathological changes and morphometric changes more rapidly and of greater intensity than snakes infected with viruses from genogroups A or C. Copyright © 2017 Elsevier Ltd. All rights reserved.

  13. [Feeding habits of Lutjanus guttatus (Pisces: Lutjanidae) at Los Cóbanos and Puerto La Libertad, El Salvador].

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    Rodrigo Rojas, José; Maravilla, Erick; Chicas, Francisco

    2004-03-01

    Abstract: A total of 175 spotted snapper Lutjanus guttatus were collected monthly in the Los Cobanos and Puerto La Libertad, El Salvador, from January to December 2000 to determine its feeding habits. The fishes studied ranged 9.8 - 58.0 cm in total length. Were collected using push-net and hook and line. This snapper is a bentonic opportunistic carnivorous predator. The total biomass of the stomach contents was 260.5 g. Crustaceans (Squillidae, Portunidae, Dynomenidae. Penaeidae, Sicyoniidae, Callianassidae), were the most abundant group: they accounted for 50.4% of the total biomass. Numerically, Portunus asper was the most abundant prey. Ontogenic differences were observed in the diet. In juveniles (16 cm TL). at any time of the year, the most frequent and abundant components were crustaceans and in adults were crustaceans, fishes and mollusks. The relative importance of different components of the diet was assessed with two indexes that combine. in different ways. percentage frequency of occurrence, percentage number and percentage weight of prey categories. The commercial use this resource and the absence of management strategies are discussed.

  14. A simple QuEChERS-like extraction approach for molecular chemical characterization of organic aerosols: application to nitrated and oxygenated PAH derivatives (NPAH and OPAH) quantified by GC-NICIMS.

    Science.gov (United States)

    Albinet, A; Nalin, F; Tomaz, S; Beaumont, J; Lestremau, F

    2014-05-01

    An extraction procedure based on the Quick Easy Cheap Effective Rugged and Safe (QuEChERS) approach has been developed and used for analysis of particle-bound nitrated and oxygenated PAH derivatives (NPAH and OPAH, respectively). Several analytical conditions, for example GC injection temperature and MS detection settings, were optimized. This analytical procedure enabled simultaneous GC-NICIMS quantification of 32 NPAH and 32 OPAH (or other oxygenated compounds), including typical components of secondary organic aerosol (SOA) formed by photooxidation of PAH (e.g. 2-formyl-trans-cinnamaldehyde and 6H-dibenzo[b,d]pyran-6-one). The QuEChERS-like approach was optimized, including the nature of the extraction solvent, the sorbent used for clean-up, and extraction time. The final extraction procedure was based on brief mechanical agitation (vortex mixing for 1.5 min), with 7 mL acetonitrile as solvent. Because dispersive solid-phase extraction (d-SPE) did not provide satisfactory results, SPE using SiO2 was selected for sample purification. Identical results were obtained when the QuEChERS-like and traditional pressurised solvent extraction (PLE) procedures were compared for analysis of fortified ambient air particle samples. The procedure was validated by analysis of two aerosol standard reference materials (NIST SRM 1649b (urban dust) and SRM 2787 (fine particulate matter, extraction methods, including PLE, the QuEChERS-like procedure resulted in increased productivity and reduced extraction cost. This paper shows that QuEChERS-like extraction procedures can be suitably adapted for molecular chemical characterization of aerosol samples and could be extended to other categories of compound.

  15. Hábitos alimentarios del pargo mancha Lutjanus guttatus (Pisces: Lutjanidae en Los Cóbanos y Puerto La Libertad, El Salvador

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    José Rodrigo Rojas M.

    2004-03-01

    Full Text Available Se determinaron los hábitos alimentarios del pargo mancha Lutjanus guttatus a partir de 175 ejemplares (9.8 y 58.0 cm LT, recolectados entre enero y diciembre del 2000 en Los Cóbanos y Puerto La Libertad, El Salvador. L. guttatus es un depredador carnívoro oportunista bentónico. La biomasa total fue de 260.5g. Los crustáceos, representados por seis familias (Squillidae, Portunidae, Dynomenidae, Penaeidae, Sicyoniidae, Callianassidae, constituyeron el 50.4% de la biomasa total. Numéricamente, la especie que más consumió el pargo mancha fue Portunus asper. Especimenes menores de 16 cm LT consumen preferentemente crustáceos. Después de los 24 cm y hasta los 44 cm el espectro alimenticio se ve diversificado con la inclusión de peces y moluscos. El 59.5% de los estómagos contenían restos (escamas, exoesqueletos y rostros de camarones con una biomasa de 47.8 g. Se discute sobre la importancia comercial de este recurso y de la ausencia de una estrategia de manejoA total of 175 spotted snapper Lutjanus guttatus were collected monthly in the Los Cobanos and Puerto La Libertad, El Salvador, from January to December 2000 to determine its feeding habits. The fishes studied ranged 9.8 - 58.0 cm in total length. Were collected using pushnet and hook and line. This snapper is a bentonic opportunistic carnivorous predator. The total biomass of the stomach contents was 260.5 g. Crustaceans (Squillidae, Portunidae, Dynomenidae, Penaeidae, Sicyoniidae, Callianassidae, were the most abundant group; they accounted for 50.4% of the total biomass. Numerically, Portunus asper was the most abundant prey. Ontogenic differences were observed in the diet. In juveniles (16 cm TL, at any time of the year, the most frequent and abundant components were crustaceans and in adults were crustaceans, fishes and mollusks. The relative importance of different components of the diet was assessed with two indexes that combine, in different ways, percentage frequency of

  16. Isolation and identification of bacteria from marine market fish Scomberomorus guttatus (Bloch and Schneider, 1801) from Madurai district, Tamil Nadu, India.

    Science.gov (United States)

    Karthiga Rani, M; Chelladurai, G; Jayanthi, G

    2016-09-01

    The present study was conducted to evaluate the hygienic quality and freshness of fish Indo-pacific King Mackerel "Scomberomorus guttatus" through the investigation of the occurrence of bacteria which is an indicator for fish quality. Fishes were collected every fortnight from Madurai fish market on monthly twice of January 2014 to March 2014. Skin surface of the fish was examined. Escherichia coli, Proteus vulgaris, Bacillus subtilis, Klebsiella pneumonia, Pseudomonas aeruginosa and Staphylococcus aureus were identified by Biochemical tests (IMViC Tests). Among the six bacterial species E. coli and K. pneumonia were found in all the collected samples where as other bacterial species were not found. The result of this study revealed that raw fish sold in Madurai fish market has high contamination so the presence of the bacterial species has strongly suggested the urgent need to improve the quality control systems in Madurai fish market.

  17. Hermit Thrush (Catharus guttatus)

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    Wood, Petra; Donovan, Therese M.

    2012-01-01

    With spotted breast and reddish tail, the Hermit Thrush lives up to its name. Although celebrated for its ethereal song, it is mostly a quiet and unobtrusive bird that spends much of its time in the lower branches of the undergrowth or on the forest floor, often seen flicking its wings while perched and quickly raising and slowly lowering its tail. A highly variable species in color and size, the Hermit Thrush's morphological characteristics and plumage have been well studied, with 12-13 subspecies now recognized (see Systematics).This thrush is one of the most widely distributed forest-nesting migratory birds in North America and the only forest thrush whose population has increased or remained stable over the past 20 years. Its extensive breeding range includes the northern hardwood forest, as well as most of the boreal and mountainous coniferous forest areas north of Mexico, with relatively recent expansions into New England and the southern Appalachians. In migration, the species moves to lower elevations and southward, spreading out to winter over much of the southern United States, through Mexico to Guatemala and east to Bermuda. It is the only species of Catharus that winters in North America, switching from a breeding diet of mainly arthropods to a wintering diet heavily supplemented with fruits.Much has been learned about this widely distributed species since the original Birds of North America account of 1996. New information pertaining to its song, migratory behavior, winter territoriality, survival, and diet has been added, as well as many new insights into the potential effects of forest management and other human disturbances. Still lacking are detailed nesting studies, studies of juvenile dispersal, of daily activities and time budgets, and of migratory routes.

  18. Crecimiento en jaulas del pargo lunarejo Lutjanus guttatus (Steindachner, 1869 con dos tipos de dieta en Bahía Málaga, municipio de Buenaventura, Colombia

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    Edgardo Andrés Banguera Gil

    2010-01-01

    Full Text Available Para dar continuidad al “Programa de desarrollo de la maricultura en el Pacífico colombiano” adelantado por la Universidad del Pacífico, en un cerramiento natural ubicado en la vereda La Sierpe, Bahía Málaga, municipio de Buenaventura, se comparó la tasa de crecimiento de 204 ejemplares silvestres de pargo lunarejo Lutjanus guttatus , alimentados con pescado fresco y concentrado comercial al 35% en proteína, con peso y longitud total promedio de 13,79 cm y 32,21 g, respectivamente. El trabajo se realizó por espacio de 40 días en cuatro jaulas flotantes, de 3 x 1,5 x 0,75 m, dos para cada tratamiento, a densidades de 15 individuos/m 3 , utilizando el 12% de la biomasa corporal para el suministro de los alimentos a evaluar; el crecimiento se analizó mediante los siguientes índices: IPD = Incremento en Peso Diario; TCE = Tasa de Crecimiento Específico. Los peces alcanzaron un peso promedio final de 64,9±5,9 y 58,49±5,9 g para el alimento natural y balanceado comercial respectivamente, lo cual es equivalente a un IPD de 0.8 y 0.7 g/d y una TCE de 1,58 y 1,67 g/d, valores considerados buenos teniendo en cuenta su etapa de desarrollo y comparaciones con otros estudios realizados en Colombia. Los peces aceptaron los dos tipos de alimento de manera satisfactoria, durante el período de cultivo y mostraron gran tolerancia a la manipulación, resistencia a las enfermedades y a las fluctuaciones de la calidad del agua, en especial la salinidad. Los resultados señalan que existen diferencias significativas (P>0.05 entre los dos tratamientos a favor del alimento natural. Los índices de sobrevivencia fueron de 90,2% para peces alimentados con pescado fresco y 85,3% para los alimentados con concentrado. Se concluye que el pargo lunarejo Lutjanus guttatus presenta una importante ventaja para su cultivo como es la fácil aceptación de un concentrado comercial. pero el crecimiento de los peces alimentados con este producto fue

  19. Scanning laser ophthalmoscopy and optical coherence tomography imaging of spectacular ecdysis in the corn snake (Pantherophis guttatus) and the California king snake (Lampropeltis getulus californiae).

    Science.gov (United States)

    Cazalot, Guillaume; Rival, Franck; Linsart, Adeline; Isard, Pierre-François; Tissier, Marion; Peiffer, Robert Louis; Dulaurent, Thomas

    2015-01-01

    One of the singularities of the eyes of snakes is the presence of the spectacle, a transparent and vascularized integument covering the cornea. The spectacle is completely renewed during ecdysis. Combined scanning laser ophthalmoscopy (SLO), optical coherence tomography (OCT), and conventional macrophotography were used to image this phenomenon. A spectral OCT/SLO examination and macrophotography were performed in four healthy adult corn snakes (Pantherophis guttatus) and one healthy adult California king snake (Lampropeltis getulus californiae) the day before the start of ecdysis and then daily during ecdysis. In all animals, ecdysis lasted 5 days. The spectacle was hardly visible at baseline, but became obvious at day one, while the subspectacular space became larger and the superficial cornea presented a hyperechoic band. At day two, eye surface became translucent, and at the same time, vascularization of the spectacle was visible using SLO. At day 3, the vascularization was no longer visible, while the subspectacular space increased and the eye surface remained translucent. At day 4, the eye surface was transparent and the superficial hyperechoic band started to become less bright. At day 5, the old spectacle was shed and all the parameters returned to baseline. We hypothesize that the echogenicity modifications of the anterior cornea correspond to major metabolic activity associated with new spectacle formation. This increased metabolic activity may contribute to the neovascularization and play an important role in the accumulation of fluid in the subspectacular space, facilitating the shedding of the old spectacle. © 2014 American College of Veterinary Ophthalmologists.

  20. Estimación de parámetros biológico-pesqueros para el pargo mancha Lutjanus guttatus en el Golfo de Nicoya, Costa Rica. (ING

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    Mauricio Vargas Barquero

    2016-03-01

    Full Text Available The spotted snapper Lutjanus guttatus is one of the most important demersal species of the Pacific Coast of Costa Rica. This demersal fish is caught mainly by the artesanal fleet with gill nets and bottom long lines in the external zone of the Nicoya Gulf, producing around 62 tonnes in 1996. Nevertheless not much attention have been paid to the study of this species. According to national statics the tendency in recent years for the spotted snapper is to decrease in landings as well as in size of capture. This could be a sign of overexploitation of this species which lead us to the development of the present study. The degree of exploitation exerted on this population was quantified through the estimation of the instantaneous rate of total, natural and fishing mortality: 1.2, 0.6 and 0.6/year, respectively. This means that this population is completely exploited and that no further fishing effort should be applied to this stock. As part of this study the sex ratio was estimated, which did not depart significantly from 1:1. The total length vs. total weight relationship was also estimated and no sex related differences were found, which supports the idea that this species presents no sexual dimorphism. Length at first maturity for the population was 33 ± 3 cm total length. The Von Bertalanffy growth parameters, L∞ and k, 67 cm and 0.30/years respectively, show that the spotted snapper is a slow growing species with a longevity of around 10 years.

  1. Desarrollo osteológico de la columna vertebral y del complejo caudal de larvas de Lutjanus guttatus (Perciformes: Lutjanidae en condiciones de cultivo

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    Luz Estela Rodríguez-Ibarra

    2015-03-01

    Full Text Available El pargo flamenco (Lutjanus guttatus es una especie de importancia comercial en México con un gran potencial para su cultivo. El estudio osteológico en estadios tempranos de esta especie bajo condiciones controladas, es una herramienta importante para el conocimiento de su estructura ósea normal y poder detectar las malformaciones que se puedan presentar. El objetivo del presente trabajo se realizó para conocer y describir el desarrollo osteológico normal de la columna vertebral y el complejo caudal de 540 larvas de 2.1 a 17.5mm de longitud total (LT bajo condiciones de cultivo a 28°C, 5.74mg/L de oxígeno y 32.2UPS de salinidad. Diariamente se tomó una muestra de 15 organismos desde el día uno hasta el 36 después de la eclosión (DDE y se procesaron con las técnicas de clareado y tinción de cartílago (azul aciano y hueso (rojo alizarina para llevar a cabo la descripción de las estructuras. La columna vertebral se divide en región abdominal con diez vértebras y región caudal compuesta por 14 vértebras incluido el urostilo. El desarrollo del esqueleto axial inicia con la formación de los arcos neurales y hemales a los 3.8mm de LT. A los 4.1mm de LT empieza la formación de los hipurales y parahipural que son elementos caudales. Entre los 5.3 y 5.8mm de LT se observó en pre-flexión y flexión del notocordio y la formación de todos los hipurales. La osificación de las vértebras en la región abdominal y en algunos arcos neurales inició a los 9.5mm de LT. A los 10.2mm de LT se osificó la región caudal y todos los arcos neurales y hemales. A los 11.2mm LT se osificaron todas las vértebras abdominales con sus respectivos arcos neurales y los parapófisis, mientras que los elementos del esqueleto caudal que se osificaron fueron los hipurales, parahipurales y las espinas hemales modificadas. A los 15.5mm de LT se osificaron los radios de la aleta caudal y 12 espinas neurales y 3 hemales. El proceso de osificación de las

  2. Variabilidad Oceanográfica en el Ecuador y su utilización para la planificación de la maricultura oceánica de las especies Pargo, Lutjanus guttatus, y Huayaipe, Seriola rivoliana

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    Jhonny Chavarría

    2016-04-01

    Full Text Available Existe una relación directa entre el comportamiento de las especies marinas y las condiciones oceanográficas en las que se desarrollan, lo cual hace indispensable un análisis de tales condiciones para la planificación y análisis de factibilidad técnica y ambiental de proyectos de maricultura. El mar ecuatoriano por encontrarse a ambos lados de la línea ecuatorial, y en el lado oriental del Océano Pacífico, presenta particularidades que deben ser consideradas y que pueden, en una fase inicial, ser abordadas desde la descripción de las masas de agua y la macro circulación de la zona como los ejes principales que caracterizan sus aguas. Aun cuando las aguas ecuatorianas son consideradas como propicias para el cultivo de especies tropicales como Pargo, Lutjanus guttatus, y Huayaipe, Seriola rivoliana, en estructuras confinadas mar afuera, la planificación de una maricultura oceánica sostenible debe considerar la variabilidad climática local que, a diferencia de otros países del Pacífico Sudeste, se manifiesta principalmente en la dirección latitudinal, con influencia prolongada de aguas subtropicales en el sector sur. Este trabajo muestra a través del análisis de la variabilidad oceanográfica ecuatoriana, distintos escenarios, en escalas espaciales y temporales, que pudieran representar mejores condiciones para el desarrollo de la maricultura oceánica, o en el otro extremo posibles escenarios de riesgo.

  3. The first description of oarfish Regalecus glesne (Regalecus russellii Cuvier 1816) ageing structures

    Science.gov (United States)

    Midway, S.R.; Wagner, Tyler

    2016-01-01

    Despite being a large, conspicuous teleost with a worldwide tropical and temperate distribution, the giant oarfish Regalecus spp. remain very rare fish species in terms of scientific sampling. Subsequently, very little biological information is known about Regalecus spp. and almost nothing has been concluded in the field of age and growth (Roberts, 2012). No studies of otoliths or temporal (annual) markings on any hard structures have been reported, and to our knowledge otoliths have never been recovered from any specimens (Tyson Roberts, personal communication),although a few texts do provide illustrations of Regalecus sp. otoliths (Lin and Chang, 2012; Nolf, 2013). Further inferential difficulty comes from the fact that age and growth studies of any Lampridiforme species are rare. Lampris guttatus is perhaps the only Lampridiforme species for which any biological information has been reported(Francis et al., 2004), which stems from the species commercial value. In order to begin understanding any species (for later purposes of management, conservation, etc.), basic biological information is needed. In the present study, we examine not only the first Regalecus russellii otolith, but provide suggestions toward future work that should direct data collection that can be used to generate basic biological information for this species.

  4. Comparative characterization of protease activity in cultured spotted rose snapper juveniles (Lutjanus guttatus

    Directory of Open Access Journals (Sweden)

    Emyr Peña

    2015-09-01

    Full Text Available Partial characterizations of digestive proteases were studied in three life stages of spotted rose snapper: early (EJ, middle (MJ and late juvenile (LJ with corresponding average weights of 21.3 ± 2.6 g (3 months after hatching, MAH, 190 ± 4.4 g (7 MAH, and 400 ± 11.5 g (12 MAH. At sampling points, the digestive tract was dissected into the stomach (St, pyloric caeca (PC, and the intestine in three sections (proximal (PI, middle (MI and distal intestine (DI. The effect of pH and temperature and specific inhibitors were evaluated for acid and alkaline proteases. Total acid and alkaline protease activity showed a tendency to increase with juvenile life stage of fish while trypsin activity decreased. Differences were found in acid and alkaline protease activities at different pH and temperatures during juvenile stages. Pepstatin A inhibited total activity in the stomach extract in all juvenile stages. Activity in total alkaline protease inhibition was significantly higher in EJ using TLCK, PMSF, SBTI, Phen and Ovo than in MJ and LJ, while no significant differences were found with TPCK inhibition. Therefore increases in protease activities with fish growth through juvenile stages in which a substitution or diversification in the type of alkaline enzymes exist. These results lead a better comprehension of changes in digestive potential of Lutjanidae fish.

  5. Larval assemblages of large and medium-sized pelagic species in the Straits of Florida

    Science.gov (United States)

    Richardson, David E.; Llopiz, Joel K.; Guigand, Cedric M.; Cowen, Robert K.

    2010-07-01

    Critical gaps in our understanding of the distributions, interactions, life histories and preferred habitats of large and medium-size pelagic fishes severely constrain the implementation of ecosystem-based, spatially structured fisheries management approaches. In particular, spawning distributions and the environmental characteristics associated with the early life stages are poorly documented. In this study, we consider the diversity, assemblages, and associated habitat of the larvae of large and medium-sized pelagic species collected during 2 years of monthly surveys across the Straits of Florida. In total, 36 taxa and 14,295 individuals were collected, with the highest diversity occurring during the summer and in the western, frontal region of the Florida Current. Only a few species (e.g. Thunnus obesus, T. alalunga, Tetrapturus pfluegeri) considered for this study were absent. Small scombrids (e.g. T. atlanticus, Katsuwonus pelamis, Auxis spp.) and gempylids dominated the catch and were orders of magnitude more abundant than many of the rare species (e.g. Thunnus thynnus,Kajikia albida). Both constrained (CCA) and unconstrained (NMDS) multivariate analyses revealed a number of species groupings including: (1) a summer Florida edge assemblage (e.g. Auxis spp., Euthynnus alleterattus, Istiophorus platypterus); (2) a summer offshore assemblage (e.g. Makaira nigricans, T. atlanticus, Ruvettus pretiosus, Lampris guttatus); (3) an ubiquitous assemblage (e.g. K. pelamis, Coryphaena hippurus, Xiphias gladius); and (4) a spring/winter assemblage that was widely dispersed in space (e.g. trachipterids). The primary environmental factors associated with these assemblages were sea-surface temperature (highest in summer-early fall), day length (highest in early summer), thermocline depth (shallowest on the Florida side) and fluorescence (highest on the Florida side). Overall, the results of this study provide insights into how a remarkable diversity of pelagic species

  6. Estimating the community-level impact of the riparian alien species Mimulus guttatus by using a replicated BACI field experiment

    Czech Academy of Sciences Publication Activity Database

    Hejda, Martin; Pyšek, Petr

    2008-01-01

    Roč. 7, - (2008), s. 250-257 ISSN 1619-0033 R&D Projects: GA ČR(CZ) GA206/05/0323 Grant - others:ALARM(XE) GOCE-CT-2003-506675 Institutional research plan: CEZ:AV0Z60050516 Keywords : plant invasions * impact * species diversity Subject RIV: EF - Botanics

  7. ACUICULTURA DE PARGO LA MANCHA LUTJANUS GUTTATUS (STEINDACHNER, 1869 EN COSTA RICA DENTRO DE UN ENFOQUE ECOSISTÉMICO

    Directory of Open Access Journals (Sweden)

    Angel Herrera-Ulloa

    2011-07-01

    Full Text Available La sobreexplotación pesquera y la búsqueda de alternativas ante la pobreza crónica han llevado a explorar el campo de la maricultura por medio de un enfoque ecosistémico se abrieron dos procesos paralelos: una estrategia e; investigación en laboratorio para el levantamiento larval de peces marinos tropicales y una estrategia de comanejo para desarrollar el cultivo de peces marinos tropicales. El pargo la mancha muestra gran potencial de producción de larvas y posterior cultivo en el mar. No mostró respuestas positivas a la inducción por medio de hormonas, el desarrollo de un ambiente adecuado para su reproducción espontánea, permitió tener desoves frecuentes y de calidad. La fase de levantamiento larval mostró contratiempos por el tamaño reducido de las larvas de pargo la mancha el manejo en tanques apropiados y el uso de enriquecedores permitieran mejorar los procesos y llegar a incrementar la producción de alevines. El enfoque ecosistémico permitió abrir los espacios necesarios que permitieron la operación de un proyecto piloto. La granja se creó con un enfoque productivo, pero también para turismo rural. Overfishing and the search for alternatives to it, led us to the explore mariculture as an option using an ecosystem-based approach through two parallel processes: an in-laboratory research strategy for larval rearing of tropical marine fish, and a strategy of co-management to develop tropical marine fish aquaculture. The spotted rose snapper shows great potential for larvae production and cage culture. This species showed no responses to hormone induction; however, the set up of a suitable environment allowed frequent, high-quality spontaneous spawnings. The larval rearing phase presented problems due to the small size of the larvae; although, management in appropriate tanks and the use of enrichments improved the processes, increasing the production of juveniles. This ecosystem approach allowed the operation of a profitable farm pilot project with a productive approach, but with rural tourism in mind as well.

  8. Comparative developmental toxicity of environmentally relevant oxygenated PAHs

    International Nuclear Information System (INIS)

    Knecht, Andrea L.; Goodale, Britton C.; Truong, Lisa; Simonich, Michael T.; Swanson, Annika J.; Matzke, Melissa M.; Anderson, Kim A.; Waters, Katrina M.; Tanguay, Robert L.

    2013-01-01

    Oxygenated polycyclic aromatic hydrocarbons (OPAHs) are byproducts of combustion and photo-oxidation of parent PAHs. OPAHs are widely present in the environment and pose an unknown hazard to human health. The developing zebrafish was used to evaluate a structurally diverse set of 38 OPAHs for malformation induction, gene expression changes and mitochondrial function. Zebrafish embryos were exposed from 6 to 120 h post fertilization (hpf) to a dilution series of 38 different OPAHs and evaluated for 22 developmental endpoints. AHR activation was determined via CYP1A immunohistochemistry. Phenanthrenequinone (9,10-PHEQ), 1,9-benz-10-anthrone (BEZO), xanthone (XAN), benz(a)anthracene-7,12-dione (7,12-B[a]AQ), and 9,10-anthraquinone (9,10-ANTQ) were evaluated for transcriptional responses at 48 hpf, prior to the onset of malformations. qRT-PCR was conducted for a number of oxidative stress genes, including the glutathione transferase(gst), glutathione peroxidase(gpx), and superoxide dismutase(sod) families. Bioenergetics was assayed to measure in vivo oxidative stress and mitochondrial function in 26 hpf embryos exposed to OPAHs. Hierarchical clustering of the structure-activity outcomes indicated that the most toxic of the OPAHs contained adjacent diones on 6-carbon moieties or terminal, para-diones on multi-ring structures. 5-carbon moieties with adjacent diones were among the least toxic OPAHs while the toxicity of multi-ring structures with more centralized para-diones varied considerably. 9,10-PHEQ, BEZO, 7,12-B[a]AQ, and XAN exposures increased expression of several oxidative stress related genes and decreased oxygen consumption rate (OCR), a measurement of mitochondrial respiration. Comprehensive in vivo characterization of 38 structurally diverse OPAHs indicated differential AHR dependency and a prominent role for oxidative stress in the toxicity mechanisms. - Highlights: • OPAHs are byproducts of combustion present in the environment. • OPAHs pose a largely

  9. Short Communication: Emission of Oxygenated Polycyclic Aromatic Hydrocarbons from Biomass Pellet Burning in a Modern Burner for Cooking in China.

    Science.gov (United States)

    Shen, Guofeng; Wei, Siye; Zhang, Yanyan; Wang, Rong; Wang, Bin; Li, Wei; Shen, Huizhong; Huang, Ye; Chen, Yuanchen; Chen, Han; Wei, Wen; Tao, Shu

    2012-12-01

    Biomass pellets are undergoing fast deployment widely in the world, including China. To this stage, there were limited studies on the emissions of various organic pollutants from the burning of those pellets. In addition to parent polycyclic aromatic hydrocarbons, oxygenated PAHs (oPAHs) have been received increased concerns. In this study, emission factors of oPAHs (EF oPAHs ) were measured for two types of pellets made from corn straw and pine wood, respectively. Two combustion modes with (mode II) and without (mode I) secondary side air supply in a modern pellet burner were investigated. For the purpose of comparison, EF oPAHs for raw fuels combusted in a traditional cooking stove were also measured. EF oPAHs were 348±305 and 396±387 µg/kg in the combustion mode II for pine wood and corn straw pellets, respectively. In mode I, measured EF oPAHs were 77.7±49.4 and 189±118 µg/kg, respectively. EFs in mode II were higher (2-5 times) than those in mode I mainly due to the decreased combustion temperature under more excess air. Compared to EF oPAHs for raw corn straw and pine wood burned in a traditional cooking stove, total EF oPAHs for the pellets in mode I were significantly lower ( p < 0.05 ), likely due to increased combustion efficiencies and change in fuel properties. However, the difference between raw biomass fuels and the pellets burned in mode II was not statistically significant. Taking both the increased thermal efficiencies and decreased EFs into consideration, substantial reduction in oPAH emission can be expected if the biomass pellets can be extensively used by rural residents.

  10. PARR LEGACY - EOP Pop-up Archival Transmission data

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — These data contain vertical dive depth and temperature data from numerous pelagic species including bigeye tuna, opah, swordfish and whale sharks

  11. Attachment study of Agrobacterium tumefaciens to yam spp

    African Journals Online (AJOL)

    Charles S.Wortmann

    guttatus (Scrophulariaceae). Amer. J. Bot. 77:1505–1507. 13. Dole, J.A. (1992). Reproductive assurance mechanisms in three taxa of the Mimulus guttatus complex (Scrophulariaceae). Amer. J. Bot. 79:650–659. 14. Ellstrand, N.C. and Foster, K.W. (1983). Impact of population structure on the apparent out-crossing rate of ...

  12. Household air pollution and personal exposure to nitrated and oxygenated polycyclic aromatics (PAHs) in rural households: Influence of household cooking energies.

    Science.gov (United States)

    Chen, Y; Du, W; Shen, G; Zhuo, S; Zhu, X; Shen, H; Huang, Y; Su, S; Lin, N; Pei, L; Zheng, X; Wu, J; Duan, Y; Wang, X; Liu, W; Wong, M; Tao, S

    2017-01-01

    Residential solid fuels are widely consumed in rural China, contributing to severe household air pollution for many products of incomplete combustion, such as polycyclic aromatic hydrocarbons (PAHs) and their polar derivatives. In this study, concentrations of nitrated and oxygenated PAH derivatives (nPAHs and oPAHs) for household and personal air were measured and analyzed for influencing factors like smoking and cooking energy type. Concentrations of nPAHs and oPAHs in kitchens were higher than those in living rooms and in outdoor air. Exposure levels measured by personal samplers were lower than levels in indoor air, but higher than outdoor air levels. With increasing molecular weight, individual compounds tended to be more commonly partitioned to particulate matter (PM); moreover, higher molecular weight nPAHs and oPAHs were preferentially found in finer particles, suggesting a potential for increased health risks. Smoking behavior raised the concentrations of nPAHs and oPAHs in personal air significantly. People who cooked food also had higher personal exposures. Cooking and smoking have a significant interaction effect on personal exposure. Concentrations in kitchens and personal exposure to nPAHs and oPAHs for households using wood and peat were significantly higher than for those using electricity and liquid petroleum gas (LPG). © 2016 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

  13. Natural variation for a hybrid incompatibility between two species of Mimulus.

    Science.gov (United States)

    Sweigart, Andrea L; Mason, Amanda R; Willis, John H

    2007-01-01

    Understanding the process by which hybrid incompatibility alleles become established in natural populations remains a major challenge to evolutionary biology. Previously, we discovered a two-locus Dobzhansky-Muller incompatibility that causes severe hybrid male sterility between two inbred lines of the incompletely isolated wildflower species, Mimulus guttatus and M. nasutus. An interspecific cross between these two inbred lines revealed that the M. guttatus (IM62) allele at hybrid male sterility 1 (hms1) acts dominantly in combination with recessive M. nasutus (SF5) alleles at hybrid male sterility 2 (hms2) to cause nearly complete hybrid male sterility. In this report, we extend these genetic analyses to investigate intraspecific variation for the hms1-hms2 incompatibility in natural populations of M. nasutus and M. guttatus, performing a series of interspecific crosses between individuals collected from a variety of geographic locales. Our results suggest that hms2 incompatibility alleles are common and geographically widespread within M. nasutus, but absent or rare in M. guttatus. In contrast, the hms1 locus is polymorphic within M. guttatus and the incompatibility allele appears to be extremely geographically restricted. We found evidence for the presence of the hms1 incompatibility allele in only two M. guttatus populations that exist within a few kilometers of each other. The restricted distribution of the hms1 incompatibility allele might currently limit the potential for the hms1-hms2 incompatibility to act as a species barrier between sympatric populations of M. guttatus and M. nasutus. Extensive sampling within a single M. guttatus population revealed that the hms1 locus is polymorphic and that the incompatibility allele appears to segregate at intermediate frequency, a pattern that is consistent with either genetic drift or natural selection.

  14. Occurrence and exposure to polycyclic aromatic hydrocarbons and their derivatives in a rural Chinese home through biomass fuelled cooking

    International Nuclear Information System (INIS)

    Ding Junnan; Zhong Junjun; Yang Yifeng; Li Bengang; Shen Guofeng; Su Yuhong; Wang Chen; Li Wei; Shen Huizhong; Wang Bin; Wang Rong; Huang Ye; Zhang Yanyan; Cao Hongying; Zhu Ying; Simonich, Staci L.M.; Tao Shu

    2012-01-01

    The concentration and composition of PAHs emitted from biomass cooking fuel were characterized in a rural non-smoking household in northern China. Twenty-two parent PAHs (pPAHs), 12 nitro-PAHs (nPAHs), and 4 oxy-PAHs (oPAHs) were measured in the kitchen, bedroom, and outdoors during both summer and winter. The most severe contamination occurred in the kitchen in the winter, where the daily mean concentrations of pPAHs, nPAHs, and oPAHs were 7500 ± 4100, 38 ± 29, and 8400 ± 9200 ng/m 3 , respectively. Our results suggest that the nPAHs were largely from secondary formation in ambient air while oPAHs were either from primary emission of biomass burning or secondary formation from pPAHs in the kitchen. The daily mean benzo(a)pyrene equivalent exposure concentration was as high as 200 ± 160 ng/m 3 in the winter for the housewife who did the cooking compared to 59 ± 37 ng/m 3 for the control group that did not cook. - Highlights: ► Very high levels of parent PAHs, nitro-PAHs, and oxy-PAHs were detected in a rural non-smoking household in northern China. ► The PAHs measured in the bedroom air were primarily from the kitchen in the winter and from ambient air in the summer. ► The nPAHs were largely from secondary formation in ambient air, while oPAHs were either from primary emission of biomass burning or secondary formation. ► The daily mean benzo(a)pyrene equivalent exposure concentration was as high as 200 ± 160 ng/m 3 in the winter for the cooking housewife. - Rural residents, particularly housewives that cook, are exposed to very high PAH, including nitro and oxygenated-PAH, concentrations in indoor air.

  15. Concentrations, sources and health effects of parent, oxygenated- and nitrated- polycyclic aromatic hydrocarbons (PAHs) in middle-school air in Xi'an, China

    Science.gov (United States)

    Wang, Jingzhi; Xu, Hongmei; Guinot, Benjamin; Li, Lijuan; Ho, Steven Sai Hang; Liu, Suixin; Li, Xiaoping; Cao, Junji

    2017-08-01

    Indoor and outdoor concentrations of polycyclic aromatic hydrocarbons (PAHs), oxygenated-PAHs (OPAHs), and nitro-PAHs (NPAHs) associated with PM2.5 particles were monitored in a middle-school classroom from 8 to 22 March 2012 in Xi'an, China. The total PAHs ranged from 49.6 to 140.0 ng/m3 in outdoors and 50.3 to 111.6 ng/m3 in indoors, while OPAHs and NPAHs showed averages of 19.1 and 16.4 ng/m3, 0.1039 and 0.0785 ng/m3 for outdoor and indoor air, respectively. Strong correlations were found between indoor (I) and outdoor (O), and the I/O ratios were school in Xi'an. Indoor pollutants were mostly influenced by outdoor air. Biomass burning, coal combustion, and vehicle emission were main sources for PAHs. Secondary formation was the main source for OPAHs and NPAHs. Inhalation cancer risks assessment of PAHs showed there were potential health risks for students during sampling time.

  16. Influence of conspecific and heterospecific aggregation cues and alarm odors on shelter choice by syntopic spiny lobsters.

    Science.gov (United States)

    Briones-Fourzán, Patricia; Ramírez-Zaldívar, Eunice; Lozano-Alvarez, Enrique

    2008-10-01

    In spiny lobsters, conspecific scents ("aggregation cues") may mediate gregarious diurnal sheltering, but scents from injured conspecifics ("alarm odors") may elicit avoidance behavior. In laboratory experiments, individuals of two coexisting species, Panulirus guttatus (a reef-obligate) and P. argus (a temporary reef-dweller), significantly chose shelters emanating conspecific aggregation cues and responded randomly to shelters emanating heterospecific aggregation cues. However, despite evidence that the two species perceived each other's alarm odors to a similar extent, P. guttatus responded randomly to shelters emanating either conspecific or heterospecific alarm odors, whereas P. argus significantly avoided both. This differential influence of alarm odors likely reflects interspecific differences in life history, sociality, and behavior. The less social, reef-obligate P. guttatus lobsters forage close to their reef dens, into which they retract deeply upon perception of risk. This cryptic behavior may offset the need to avoid conspecific (and heterospecific) alarm odors. In contrast, avoidance of conspecific alarm odors by P. argus is consistent with its ontogenetic habitat shifts and greater sociality. Furthermore, because reef-dwelling P. argus lobsters forage across open areas away from the reef, an ability to avoid alarm odors from P. guttatus upon returning to their reef dens may increase their fitness.

  17. Differential adaptation to a harsh granite outcrop habitat between sympatric Mimulus species.

    Science.gov (United States)

    Ferris, Kathleen G; Willis, John H

    2018-03-31

    Understanding which environmental variables and traits underlie adaptation to harsh environments is difficult because many traits evolve simultaneously as populations or species diverge. Here, we investigate the ecological variables and traits that underlie Mimulus laciniatus' adaptation to granite outcrops compared to its sympatric, mesic-adapted progenitor, Mimulus guttatus. We use fine-scale measurements of soil moisture and herbivory to examine differences in selective forces between the species' habitats, and measure selection on flowering time, flower size, plant height, and leaf shape in a reciprocal transplant using M. laciniatus × M. guttatus F 4 hybrids. We find that differences in drought and herbivory drive survival differences between habitats, that M. laciniatus and M. guttatus are each better adapted to their native habitat, and differential habitat selection on flowering time, plant stature, and leaf shape. Although early flowering time, small stature, and lobed leaf shape underlie plant fitness in M. laciniatus' seasonally dry environment, increased plant size is advantageous in a competitive mesic environment replete with herbivores like M. guttatus'. Given that we observed divergent selection between habitats in the direction of species differences, we conclude that adaptation to different microhabitats is an important component of reproductive isolation in this sympatric species pair. © 2018 The Author(s). Evolution © 2018 The Society for the Study of Evolution.

  18. Comparative toxicity and endocrine disruption potential of urban and rural atmospheric organic PM1 in JEG-3 human placental cells

    International Nuclear Information System (INIS)

    Drooge, Barend L. van; Marqueño, Anna; Grimalt, Joan O.; Fernández, Pilar; Porte, Cinta

    2017-01-01

    Outdoor ambient air particulate matter and air pollution are related to adverse effects on human health. The present study assesses the cytotoxicity and ability to disrupt aromatase activity of organic PM 1 extracts from rural and urban areas at equivalent air volumes from 2 to 30 m 3 , in human placental JEG-3 cells. Samples were chemically analyzed for particle bounded organic compounds with endocrine disrupting potential, i.e. PAH, O-PAH, phthalate esters, but also for organic molecular tracer compounds for the emission source identification. Rural samples collected in winter were cytotoxic at the highest concentration tested and strongly inhibited aromatase activity in JEG-3 cells. No cytotoxicity was detected in summer samples from the rural site and the urban samples, while aromatase activity was moderately inhibited in these samples. In the urban area, the street site samples, collected close to intensive traffic, showed stronger inhibition of aromatase activity than the samples simultaneously collected at a roof site, 50 m above ground level. The cytotoxicity and endocrine disruption potential of the samples were linked to combustion products, i.e. PAH and O-PAH, especially from biomass burning in the rural site in winter. - Highlights: • Organic extracts of outdoor ambient air PM1 showed aromatase activity inhibition in exposed human placental JEG-3 cells. • Cytotoxicity and strongest endocrine disruption was observed in rural winter samples, while lowest inhibition was observed in urban background site 50 m above a busy street. • Cytotoxicity and aromatase activity inhibition in the samples were linked to combustion products, i.e. PAH and O-PAH, especially from biomass burning. - Organic extracts from ambient air PM 1 related to biomass burning are more cytotoxic and have stronger endocrine disruption potential than urban PM 1 .

  19. Emission of oxygenated polycyclic aromatic hydrocarbons from biomass pellet burning in a modern burner for cooking in China

    Science.gov (United States)

    Shen, Guofeng; Wei, Siye; Zhang, Yanyan; Wang, Rong; Wang, Bin; Li, Wei; Shen, Huizhong; Huang, Ye; Chen, Yuanchen; Chen, Han; Wei, Wen; Tao, Shu

    2012-12-01

    Biomass pellets are undergoing fast deployment widely in the world, including China. To this stage, there were limited studies on the emissions of various organic pollutants from the burning of those pellets. In addition to parent polycyclic aromatic hydrocarbons, oxygenated PAHs (oPAHs) have been received increased concerns. In this study, emission factors of oPAHs (EFoPAHs) were measured for two types of pellets made from corn straw and pine wood, respectively. Two combustion modes with (mode II) and without (mode I) secondary side air supply in a modern pellet burner were investigated. For the purpose of comparison, EFoPAHs for raw fuels combusted in a traditional cooking stove were also measured. EFoPAHs were 348 ± 305 and 396 ± 387 μg kg-1 in the combustion mode II for pine wood and corn straw pellets, respectively. In mode I, measured EFoPAHs were 77.7 ± 49.4 and 189 ± 118 μg kg-1, respectively. EFs in mode II were higher (2-5 times) than those in mode I mainly due to the decreased combustion temperature under more excess air. Compared to EFoPAHs for raw corn straw and pine wood burned in a traditional cooking stove, total EFoPAHs for the pellets in mode I were significantly lower (p pellets burned in mode II was not statistically significant. Taking both the increased thermal efficiencies and decreased EFs into consideration, substantial reduction in oPAH emission can be expected if the biomass pellets can be extensively used by rural residents.

  20. [Occurrence and Removal of Polycyclic Aromatic Hydrocarbons and Their Derivatives in Typical Wastewater Treatment Plants in Beijing].

    Science.gov (United States)

    Qiao, Meng; Qi, Wei-xiao; Zhao, Xu; Liu, Hui-juan; Qu, Jiu-hui

    2016-04-15

    Substituted polycyclic aromatic hydrocarbons (SPAHs) can be emitted to the environment not only through the incomplete combustion, but also through the transformation from parent polycyclic aromatic hydrocarbons (PAHs) by photo chemical and biological processes. The toxicities of some SPAHs are higher than their corresponding PAHs. Samples were collected from the wastewater treatment plants in Beijing. Three types of SPAHs, including oxy-PAHs (OPAHs), methyl-PAHs (MPAHs) and nitro-PAHs (NPAHs), as well as 16 PAHs were analyzed, in order to study the occurrence and behavior of these compounds during the wastewater biological treatment process. MPAHs, OPAHs and PAHs were detected in the influent and effluent, but no NPAHs. The concentrations of PAHs in the influent in both the aquatic and particulate phases ranged from 1.94 to 4.34 µg · L⁻¹, and SPAHs from 1.16 to 2.20 µg · L⁻¹. The concentrations of PAHs in the effluent were between 0.77 and 0.98 µg · L⁻¹, and SPAHs from 0.39 to 0.45 µg · L⁻¹. The concentrations of the MPAHs were lower than their corresponding PAHs, while OPAHs were higher. The removal efficiencies of all the compounds ranged from 53% to 83%. PAHs and SPAHs were mainly removed by adsorption and biodegradation during the activated sludge treatment processes. Some OPAHs could be transformed from PAHs, and could be accumulated. The PAHs were mainly originated from incomplete combustion of wood and coal, and some from combustion of petroleum, while only a little from the discharge of petroleum. The concentrations of PAHs and SPAHs in the effluent were higher in autumn than summer and winter. Most of the SPAHs and PAHs were discharged to the agriculture area through the river-water irrigation, which might pose potential risk to the humans. As a result, it is necessary to upgrade the wastewater treatment process to improve the removal efficiency of PAHs and SPAHs.

  1. Dicty_cDB: Contig-U00318-1 [Dicty_cDB

    Lifescience Database Archive (English)

    Full Text Available 2 Mim... 48 0.90 1 ( CV517394 ) 0089P0002Z_H11_T7 Mimulus guttatus library 2 Mimu... 48 0.90 1 ( CT863034 ) Oryza sati...069 CHORI-252 Vervet Mo... 48 0.90 1 ( CV517459 ) 0089P0002Z_H11_SP6 Mimulus guttatus library...va Indica Group EST sequence:OSIGCRA212... 48 0.90 1 ( EW966883 ) LS_11_C22_T7 Headlice composite library...2( CP000609 |pid:none) Methanococcus maripaludis C5, c... 112 2e-23 EU016596_13( EU016596 |pid:none) Uncultured marine mic...roorganism H... 112 2e-23 EU016609_22( EU016609 |pid:none) Uncultured marine microorganism H..

  2. Does reef architectural complexity influence resource availability for a large reef-dwelling invertebrate?

    Science.gov (United States)

    Lozano-Álvarez, Enrique; Luviano-Aparicio, Nelia; Negrete-Soto, Fernando; Barradas-Ortiz, Cecilia; Aguíñiga-García, Sergio; Morillo-Velarde, Piedad S.; Álvarez-Filip, Lorenzo; Briones-Fourzán, Patricia

    2017-10-01

    In coral reefs, loss of architectural complexity and its associated habitat degradation is expected to affect reef specialists in particular due to changes in resource availability. We explored whether these features could potentially affect populations of a large invertebrate, the spotted spiny lobster Panulirus guttatus, which is an obligate Caribbean coral reef-dweller with a limited home range. We selected two separate large coral reef patches in Puerto Morelos (Mexico) that differed significantly in structural complexity and level of degradation, as assessed via the rugosity index, habitat assessment score, and percent cover of various benthic components. On each reef, we estimated density of P. guttatus and sampled lobsters to analyze their stomach contents, three different condition indices, and stable isotopes (δ15N and δ13C) in muscle. Lobster density did not vary with reef, suggesting that available crevices in the less complex patch still provided adequate refuge to these lobsters. Lobsters consumed many food types, dominated by mollusks and crustaceans, but proportionally more crustaceans (herbivore crabs) in the less complex patch, which had more calcareous macroalgae and algal turf. Lobsters from both reefs had a similar condition (all three indices) and mean δ15N, suggesting a similar quality of diet between reefs related to their opportunistic feeding, but differed in mean δ13C values, reflecting the different carbon sources between reefs and providing indirect evidence of individuals of P. guttatus foraging exclusively over their home reef. Overall, we found no apparent effects of architectural complexity, at least to the degree observed in our less complex patch, on density, condition, or trophic level of P. guttatus.

  3. Population connectivity among geographic variants within the Lutjanidae (Pisces of the Mexican Pacific coast through fish scale shape recognition

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    Ana L. Ibáñez

    2012-11-01

    Full Text Available Fish scale shape was used to identify geographic variants among Lutjanidae (Lutjanus argentiventris, L. guttatus and L. peru. Specimens were collected from three different geographic areas, north to south of the tropical Pacific coast of Mexico: Puerto Vallarta (PV, Manzanillo (MA and Caleta de Campos (CC. Configuration of landmark coordinates of fish scales were scaled, translated and rotated using generalized procrustes analysis, followed by principal components analysis of resulting shape coordinates. Principal component scores were submitted to cross-validated discriminant analysis to determine the efficacy of scale landmarks for discrimination by geographic variants. This was done with shape and form (shape plus size. PV and MA were recognized as one population different from the CC sampling area. Using only shape (without size, identification rates predicted geographic variant membership much better than chance (91.3%, 70.6% and 85.4% for L. argentiventris, L. guttatus and L. peru, respectively, and taking size into account, classification is somewhat improved (90.6%, 80.1% and 87.5% for L. argentiventris, L. guttatus and L. peru, respectively. Consistency of the two populations for the three species shows non-fortuitous events. Population discrimination confirmed previous genetic studies that show a zoogeographic barrier between the North Equatorial Current and the California Current. The method is non-destructive, fast and less expensive than genetic analysis, thus allowing screening of many individuals for traceability of fish.

  4. Mimulus peregrinus (Phrymaceae: A new British allopolyploid species

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    Mario Vallejo-Marin

    2012-07-01

    Full Text Available Polyploidization plays an important role in species formation as chromosome doubling results in strong reproductive isolation between derivative and parental taxa. In this note I describe a new species, Mimulus peregrinus (Phrymaceae, which represents the first recorded instance of a new British polyploid species of Mimulus (2n = 6x = 92 that has arisen since the introduction of this genus into the United Kingdom in the 1800’s. M. peregrinus presents floral and vegetative characteristics intermediate between M. guttatus and M. luteus, but can be distinguished from all naturalized British Mimulus species and hybrids based on a combination of reproductive and vegetative traits. M. peregrinus displays high pollen and seed fertility as well as traits usually associated with genome doubling such as increased pollen and stomata size. The intermediate characteristics of M. peregrinus between M. guttatus (2n = 2x = 28 and M. luteus (2n = 4x = 60-62, and its close affinity with the highly sterile, triploid (2n = 3x = 44-45 hybrid taxon M. × robertsii (M. guttatus × M. luteus, suggests that M. peregrinus may constitute an example of recent allopolyploid speciation.

  5. Hybrid male sterility in Mimulus (Phrymaceae) is associated with a geographically restricted mitochondrial rearrangement.

    Science.gov (United States)

    Case, Andrea L; Willis, John H

    2008-05-01

    Cytoplasmic male sterility (CMS) and nuclear fertility restoration (Rf) involves intergenomic coevolution. Although male-sterile phenotypes are rarely expressed in natural populations of angiosperms, CMS genes are thought to be common. The evolutionary dynamics of CMS/Rf systems are poorly understood, leaving gaps in our understanding of mechanisms and consequences of cytonuclear interactions. We characterized the molecular basis and geographic distribution of a CMS gene in Mimulus guttatus. We used outcrossing M. guttatus (with CMS and Rf) to self-fertilizing M. nasutus (lacking CMS and Rf) to generate hybrids segregating for CMS. Mitochondrial transcripts containing an essential gene (nad6) were perfectly associated with male sterility. The CMS mitotype was completely absent in M. nasutus, present in all genotypes collected from the original collection site, but in only two individuals from 34 other M. guttatus populations. This pattern suggests that the CMS likely originated at a single locality, spread to fixation within the population, but has not spread to other populations, indicating possible ecological or genetic constraints on dispersal of this CMS mitotype between populations. Extreme localization may be characteristic of CMS in hermaphroditic species, in contrast to geographically widespread mitotypes commonly found in gynodioecious species, and could directly contribute to hybrid incompatibilities in nature.

  6. Comparative toxicity and endocrine disruption potential of urban and rural atmospheric organic PM1 in JEG-3 human placental cells.

    Science.gov (United States)

    van Drooge, Barend L; Marqueño, Anna; Grimalt, Joan O; Fernández, Pilar; Porte, Cinta

    2017-11-01

    Outdoor ambient air particulate matter and air pollution are related to adverse effects on human health. The present study assesses the cytotoxicity and ability to disrupt aromatase activity of organic PM 1 extracts from rural and urban areas at equivalent air volumes from 2 to 30 m 3 , in human placental JEG-3 cells. Samples were chemically analyzed for particle bounded organic compounds with endocrine disrupting potential, i.e. PAH, O-PAH, phthalate esters, but also for organic molecular tracer compounds for the emission source identification. Rural samples collected in winter were cytotoxic at the highest concentration tested and strongly inhibited aromatase activity in JEG-3 cells. No cytotoxicity was detected in summer samples from the rural site and the urban samples, while aromatase activity was moderately inhibited in these samples. In the urban area, the street site samples, collected close to intensive traffic, showed stronger inhibition of aromatase activity than the samples simultaneously collected at a roof site, 50 m above ground level. The cytotoxicity and endocrine disruption potential of the samples were linked to combustion products, i.e. PAH and O-PAH, especially from biomass burning in the rural site in winter. Copyright © 2017 Elsevier Ltd. All rights reserved.

  7. Mechanisms of Transmission Ratio Distortion at Hybrid Sterility Loci Within and Between Mimulus Species

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    Rachel E. Kerwin

    2017-11-01

    Full Text Available Hybrid incompatibilities are a common correlate of genomic divergence and a potentially important contributor to reproductive isolation. However, we do not yet have a detailed understanding of how hybrid incompatibility loci function and evolve within their native species, or why they are dysfunctional in hybrids. Here, we explore these issues for a well-studied, two-locus hybrid incompatibility between hybrid male sterility 1 (hms1 and hybrid male sterility 2 (hms2 in the closely related yellow monkeyflower species Mimulus guttatus and M. nasutus. By performing reciprocal backcrosses with introgression lines (ILs, we find evidence for gametic expression of the hms1-hms2 incompatibility. Surprisingly, however, hybrid transmission ratios at hms1 do not reflect this incompatibility, suggesting that additional mechanisms counteract the effects of gametic sterility. Indeed, our backcross experiment shows hybrid transmission bias toward M. guttatus through both pollen and ovules, an effect that is particularly strong when hms2 is homozygous for M. nasutus alleles. In contrast, we find little evidence for hms1 transmission bias in crosses within M. guttatus, providing no indication of selfish evolution at this locus. Although we do not yet have sufficient genetic resolution to determine if hybrid sterility and transmission ratio distortion (TRD map to the same loci, our preliminary fine-mapping uncovers a genetically independent hybrid lethality system involving at least two loci linked to hms1. This fine-scale dissection of TRD at hms1 and hms2 provides insight into genomic differentiation between closely related Mimulus species and reveals multiple mechanisms of hybrid dysfunction.

  8. Mechanisms of Transmission Ratio Distortion at Hybrid Sterility Loci Within and Between Mimulus Species.

    Science.gov (United States)

    Kerwin, Rachel E; Sweigart, Andrea L

    2017-11-06

    Hybrid incompatibilities are a common correlate of genomic divergence and a potentially important contributor to reproductive isolation. However, we do not yet have a detailed understanding of how hybrid incompatibility loci function and evolve within their native species, or why they are dysfunctional in hybrids. Here, we explore these issues for a well-studied, two-locus hybrid incompatibility between hybrid male sterility 1 ( hms1 ) and hybrid male sterility 2 ( hms2 ) in the closely related yellow monkeyflower species Mimulus guttatus and M. nasutus By performing reciprocal backcrosses with introgression lines (ILs), we find evidence for gametic expression of the hms1-hms2 incompatibility. Surprisingly, however, hybrid transmission ratios at hms1 do not reflect this incompatibility, suggesting that additional mechanisms counteract the effects of gametic sterility. Indeed, our backcross experiment shows hybrid transmission bias toward M. guttatus through both pollen and ovules, an effect that is particularly strong when hms2 is homozygous for M. nasutus alleles. In contrast, we find little evidence for hms1 transmission bias in crosses within M. guttatus , providing no indication of selfish evolution at this locus. Although we do not yet have sufficient genetic resolution to determine if hybrid sterility and transmission ratio distortion (TRD) map to the same loci, our preliminary fine-mapping uncovers a genetically independent hybrid lethality system involving at least two loci linked to hms1 This fine-scale dissection of TRD at hms1 and hms2 provides insight into genomic differentiation between closely related Mimulus species and reveals multiple mechanisms of hybrid dysfunction. Copyright © 2017 Kerwin and Sweigart.

  9. Phenotypic and genetic differentiation among yellow monkeyflower populations from thermal and non-thermal soils in Yellowstone National Park.

    Science.gov (United States)

    Lekberg, Ylva; Roskilly, Beth; Hendrick, Margaret F; Zabinski, Catherine A; Barr, Camille M; Fishman, Lila

    2012-09-01

    In flowering plants, soil heterogeneity can generate divergent natural selection over fine spatial scales, and thus promote local adaptation in the absence of geographic barriers to gene flow. Here, we investigate phenotypic and genetic differentiation in one of the few flowering plants that thrives in both geothermal and non-thermal soils in Yellowstone National Park (YNP). Yellow monkeyflowers (Mimulus guttatus) growing at two geothermal ("thermal") sites in YNP were distinct in growth form and phenology from paired populations growing nearby ( 0.34), which were only weakly differentiated from each other (all F (ST) geothermal gradient in Yellowstone.

  10. Field measurement on the emissions of PM, OC, EC and PAHs from indoor crop straw burning in rural China

    International Nuclear Information System (INIS)

    Wei, Siye; Shen, Guofeng; Zhang, Yanyan; Xue, Miao; Xie, Han; Lin, Pengchuan; Chen, Yuanchen; Wang, Xilong; Tao, Shu

    2014-01-01

    Field measurements were conducted to measure emission factors of particulate matter (EF PM ), organic carbon (EF OC ), elemental carbon (EF EC ), 28 parent polycyclic aromatic hydrocarbons (EF 28pPAHs ), and 4 oxygenated PAHs (EF 4oPAHs ) for four types of crop straws burned in two stoves with similar structure but different ages. The average EF PM , EF OC , EF EC , EF 28pPAHs , and EF 4oPAHs were 9.1 ± 5.7 (1.8–22 as range), 2.6 ± 2.9 (0.30–12), 1.1 ± 1.2 (0.086–5.5), 0.26 ± 0.19 (0.076–0.96), 0.011 ± 0.14 (1.3 × 10 −4 – 0.063) g/kg, respectively. Much high EF 28pPAHs was observed in field compared with the laboratory derived EFs and significant difference in EF 28pPAHs was identified among different crop residues, indicating considerable underestimation when laboratory derived EFs were used in the inventory. The field measured EF PM , EF OC , and EF EC were significantly affected by stove age and the EFs of carbonaceous particles for the 15-year old stove were approximately 2.5 times of those for the 1-year old stove. Highlights: • Field measurements provided more reliable data for the inventory. • Emissions from indoor crop residue burning were measured in field. • Much high PAHs emissions were found in field measurement in comparison with laboratory derived results. • Emissions of carbonaceous particulate matter increased by 2.5 times in the old stove compared that in a new stove. -- Emissions of incomplete combustion pollutants strongly affected by the fuel type and stove usage

  11. Differential SPL gene expression patterns reveal candidate genes underlying flowering time and architectural differences in Mimulus and Arabidopsis.

    Science.gov (United States)

    Jorgensen, Stacy A; Preston, Jill C

    2014-04-01

    Evolutionary transitions in growth habit and flowering time responses to variable environmental signals have occurred multiple times independently across angiosperms and have major impacts on plant fitness. Proteins in the SPL family of transcription factors collectively regulate flowering time genes that have been implicated in interspecific shifts in annuality/perenniality. However, their potential importance in the evolution of angiosperm growth habit has not been extensively investigated. Here we identify orthologs representative of the major SPL gene clades in annual Arabidopsis thaliana and Mimulus guttatus IM767, and perennial A. lyrata and M. guttatus PR, and characterize their expression. Spatio-temporal expression patterns are complex across both diverse tissues of the same taxa and comparable tissues of different taxa, consistent with genic sub- or neo-functionalization. However, our data are consistent with a general role for several SPL genes in the promotion of juvenile to adult phase change and/or flowering time in Mimulus and Arabidopsis. Furthermore, several candidate genes were identified for future study whose differential expression correlates with growth habit and architectural variation in annual versus perennial taxa. Copyright © 2014 Elsevier Inc. All rights reserved.

  12. A study on the relationship of arsenic accumulation with protein, lipid, ash and moisture contents in muscle of eight species of fish in Iran

    Directory of Open Access Journals (Sweden)

    A Askary Sary

    2012-11-01

    Full Text Available A comparative study was conducted to investigate a relationship between concentration of arsenic with protein, lipid, ash and moisture content in Cyprinus carpio, Oncorhynchus mykiss, Aristichthys nobilis, Hypophthalmichthys molitrix, Ctenopharyngodon idella, Scomberomorus commerson, Scomberomorus guttatus and Otolithes ruber. A total of 72 sample of common carp, Bighead carp, silver carp and grass carp fishing from Azadegan fish farming center, Ahvaz; Rainbow trout from Cheshme Dimeh and Scomberomorus commerson, Scomberomorus guttatus and Otolithes ruber caught with gill netfrom Hendijan. Wet-digestion method was performed prior to arsenic determination in the samples. The level of arsenic was measured by atomic absorption spectrophotometer. The results showed that concentration of arsenic in the muscle of fishes was 269.87 ± 20.96 µg/Kg. Moreover, levels of protein, lipid, ash and moisture in the samples were estimated at 19.67±0.78 g/100, 2.45±0.45 g/100, 1.49±0.23 g/100, 78±1.89 g/100, respectively. Results also showed a positive correlation between the accumulation of arsenic in muscle of fishes with levels of protein, lipid, ash and moisture (p

  13. Speciation on a local geographic scale: the evolution of a rare rock outcrop specialist in Mimulus.

    Science.gov (United States)

    Ferris, Kathleen G; Sexton, Jason P; Willis, John H

    2014-08-05

    Speciation can occur on both large and small geographical scales. In plants, local speciation, where small populations split off from a large-ranged progenitor species, is thought to be the dominant mode, yet there are still few examples to verify speciation has occurred in this manner. A recently described morphological species in the yellow monkey flowers, Mimulus filicifolius, is an excellent candidate for local speciation because of its highly restricted geographical range. Mimulus filicifolius was formerly identified as a population of M. laciniatus due to similar lobed leaf morphology and rocky outcrop habitat. To investigate whether M. filicifolius is genetically divergent and reproductively isolated from M. laciniatus, we examined patterns of genetic diversity in ten nuclear and eight microsatellite loci, and hybrid fertility in M. filicifolius and its purported close relatives: M. laciniatus, M. guttatus and M. nasutus. We found that M. filicifolius is genetically divergent from the other species and strongly reproductively isolated from M. laciniatus. We conclude that M. filicifolius is an independent rock outcrop specialist despite being morphologically and ecologically similar to M. laciniatus, and that its small geographical range nested within other wide-ranging members of the M. guttatus species complex is consistent with local speciation. © 2014 The Author(s) Published by the Royal Society. All rights reserved.

  14. Assessment of predation risk through conspecific alarm odors by spiny lobsters

    Science.gov (United States)

    2009-01-01

    Strong “alarm odors” emanating from lethally injured conspecifics may indicate an imminent risk of predation to spiny lobsters. In laboratory trials,1 strong conspecific alarm odors elicited avoidance in Panulirus argus, a highly gregarious species that displays collective defense behavior, but not in Panulirus guttatus, a species that tends to aggregate when reproductive activity is high (spring) but not when it is low (late summer) and does not display collective defensive behavior. To reduce predation risk, however, lobsters may autotomize limbs, thus sustaining nonlethal injuries. I tested the response of these lobsters to scents emanating from intact, lethally-injured and non-lethally injured conspecifics. In P. argus, these scents elicited, respectively, attraction, avoidance and a random response, suggesting that, in P. argus, avoidance of conspecific alarm odors depends on their strength. In contrast, P. guttatus lobsters responded at random to scents of lethally injured conspecifics and showed a similar response to scents of intact and non-lethally injured conspecifics in the spring (attraction) and in the summer (random), reflecting the more cryptic defensive behavior of this species. Therefore, both species use conspecific alarm odors for risk-assessment, but each responds to these cues in the most effective way to reduce its risk of predation. PMID:19721871

  15. Assessment of predation risk through conspecific alarm odors by spiny lobsters: How much is too much?

    Science.gov (United States)

    Briones-Fourzán, Patricia

    2009-07-01

    Strong "alarm odors" emanating from lethally injured conspecifics may indicate an imminent risk of predation to spiny lobsters. In laboratory trials,1 strong conspecific alarm odors elicited avoidance in Panulirus argus, a highly gregarious species that displays collective defense behavior, but not in Panulirus guttatus, a species that tends to aggregate when reproductive activity is high (spring) but not when it is low (late summer) and does not display collective defensive behavior. To reduce predation risk, however, lobsters may autotomize limbs, thus sustaining nonlethal injuries. I tested the response of these lobsters to scents emanating from intact, lethally-injured and non-lethally injured conspecifics. In P. argus, these scents elicited, respectively, attraction, avoidance and a random response, suggesting that, in P. argus, avoidance of conspecific alarm odors depends on their strength. In contrast, P. guttatus lobsters responded at random to scents of lethally injured conspecifics and showed a similar response to scents of intact and non-lethally injured conspecifics in the spring (attraction) and in the summer (random), reflecting the more cryptic defensive behavior of this species. Therefore, both species use conspecific alarm odors for risk-assessment, but each responds to these cues in the most effective way to reduce its risk of predation.

  16. Moonlight controls lunar-phase-dependency and regular oscillation of clock gene expressions in a lunar-synchronized spawner fish, Goldlined spinefoot.

    Science.gov (United States)

    Takeuchi, Yuki; Kabutomori, Ryo; Yamauchi, Chihiro; Miyagi, Hitomi; Takemura, Akihiro; Okano, Keiko; Okano, Toshiyuki

    2018-04-18

    Goldlined spinefoot, Siganus guttatus, inhabits tropical and subtropical waters and synchronizes its spawning around the first quarter moon likely using an hourglass-like lunar timer. In previous studies, we have found that clock genes (Cryptochrome3 and Period1) could play the role of state variable in the diencephalon when determining the lunar phase for spawning. Here, we identified three Cry, two Per, two Clock, and two Bmal genes in S. guttatus and investigated their expression patterns in the diencephalon and pituitary gland. We further evaluated the effect on their expression patterns by daily interruptions of moonlight stimuli for 1 lunar cycle beginning at the new moon. It significantly modified the expression patterns in many of the examined clock(-related) genes including Cry3 in the diencephalon and/or pituitary gland. Acute interruptions of moonlight around the waxing gibbous moon upregulated nocturnal expressions of Cry1b and Cry2 in the diencephalon and pituitary gland, respectively, but did not affect expression levels of the other clock genes. These results highlighted the importance of repetitive moonlight illumination for stable or lunar-phase-specific daily expression of clock genes in the next lunar cycle that may be important for the lunar-phase-synchronized spawning on the next first quarter moon.

  17. Dicty_cDB: Contig-U16187-1 [Dicty_cDB

    Lifescience Database Archive (English)

    Full Text Available CI 5 ALP Hydra magnipapill... 62 2e-14 2 ( AW719233 ) LjNEST1e12r Lotus japonicus nodule library, matur... 5... 17ACDHMS_UP_015_C09_27OCT2004_075 Brassica napus ... 50 2e-09 3 ( EX123282 ) BR107112 mature green leaf cDNA library...a rapa sub... 50 2e-09 3 ( EX125217 ) BR109047 mature green leaf cDNA library KHLM Bras... 50 2e-09 3 ( EV161608 ) 0085470 Brassic...ETGS6H_UP_013_E04_15NOV2004_024 Brassica napus 6... 50 3e-08 3 ( CV515629 ) 0048P0010Z_H11_T7 Mimulus guttatus library 1 Mimu...E543256 ) 9RDBNGA_UP_037_C07_03DEC2003_059 Brassica napus -... 50 3e-08 3 ( CV515401 ) 0048P0009Z_D01_T7 Mimulus guttatus library

  18. Novos táxons de Hemilophini (Coleoptera, Cerambycidae da Região Neotropical New taxa of Hemilophini (Coleoptera, Cerambycidae from the Neotropical Region

    Directory of Open Access Journals (Sweden)

    Maria Helena M. Galileo

    2005-09-01

    Full Text Available Novos táxons descritos da Costa Rica: Erana cretaria sp. nov., Itumbiara denudata sp. nov., Hilaroleopsis coloratus sp. nov., Alampyris flavicollis sp. nov., Cotycuara viridis sp. nov., Adesmus stellatus sp. nov., A. pilatus sp. nov. (também do Panamá; do Panamá: Eulachnesia amoena sp. nov., Cotycuara crinita sp. nov.; da Venezuela: Abanycha fasciata sp. nov.; do Equador: Mariliana hovorei sp. nov., Adesmus ocellatus sp. nov.; do Peru: Susuanycha gen. nov., espécie-tipo, S. susua sp. nov., Malacoscylus elegantulus sp. nov., Adesmus guttatus sp. nov., A. calca sp. nov.; do Brasil (Minas Gerais: Sybaguasu cornutum sp. nov. Acrescenta-se chave para as espécies de Cotycuara.New taxa described from Costa Rica: Erana cretaria sp. nov., Itumbiara denudata sp. nov., Hilaroleopsis coloratus sp. nov., Alampyris flavicollis sp. nov., Cotycuara viridis sp. nov., Adesmus stellatus sp. nov., A. pilatus sp. nov. (also from Panama; from Panama: Eulachnesia amoena sp. nov., Cotycuara crinita sp. nov.; from Venezuela: Abanycha fasciata sp. nov.; from Ecuador: Mariliana hovorei sp. nov., Adesmus ocellatus sp. nov.; from Peru: Susuanycha gen. nov., type species, S. susua sp. nov., Malacoscylus elegantulus sp. nov., Adesmus guttatus sp. nov., A. calca sp. nov.; from Brazil (Minas Gerais: Sybaguasu cornutum sp. nov. A key to the species of Cotycuara is added.

  19. Screening three Finfish Species for their Potential in Removing Organic Matter from the Effluent of White Leg Shrimps (Litopenaeus vannamei Farming

    Directory of Open Access Journals (Sweden)

    Nguyen, LQ.

    2016-01-01

    Full Text Available White leg shrimp (Litopenaeus vannamei farming effluent contains pollutants that include high levels of organic matter (OM nutrients and growth-promoting substances. This study investigated the effects of varied concentrations of white leg shrimp (Litopenaeus vannamei farm wastewater 0, 50, 75 and 100%, on the survival rate (SR of three finfish species: tilapia (Oreochromis niloticus, grey mullet (Mugil cephalus and rabbit fish (Siganus guttatus as part of screening their potential in removing organic matter from the effluent of white leg shrimp farming. The different initial levels of shrimp wastewater from 50% to 100% had no significant effect on the survival rate of tilapia and mullet; but the survival rate of S. guttatus significantly decreased with increasing shrimp wastewater (P<0.05. The results showed that the removal of BOD, COD and TSS occurred in the range of 66-83, 68-81 and 30-54%; respectively and the removal efficiency of OM by mullet was higher than Tilapia in all treatments. The study also indicated that the reduction highest removal of BOD, COD and TSS was achieved being 83.1%, 80.7and 53,7% respectively, at the medium stocking density (25 fish/m2 of mullet.

  20. A simple genetic incompatibility causes hybrid male sterility in mimulus.

    Science.gov (United States)

    Sweigart, Andrea L; Fishman, Lila; Willis, John H

    2006-04-01

    Much evidence has shown that postzygotic reproductive isolation (hybrid inviability or sterility) evolves by the accumulation of interlocus incompatibilities between diverging populations. Although in theory only a single pair of incompatible loci is needed to isolate species, empirical work in Drosophila has revealed that hybrid fertility problems often are highly polygenic and complex. In this article we investigate the genetic basis of hybrid sterility between two closely related species of monkeyflower, Mimulus guttatus and M. nasutus. In striking contrast to Drosophila systems, we demonstrate that nearly complete hybrid male sterility in Mimulus results from a simple genetic incompatibility between a single pair of heterospecific loci. We have genetically mapped this sterility effect: the M. guttatus allele at the hybrid male sterility 1 (hms1) locus acts dominantly in combination with recessive M. nasutus alleles at the hybrid male sterility 2 (hms2) locus to cause nearly complete hybrid male sterility. In a preliminary screen to find additional small-effect male sterility factors, we identified one additional locus that also contributes to some of the variation in hybrid male fertility. Interestingly, hms1 and hms2 also cause a significant reduction in hybrid female fertility, suggesting that sex-specific hybrid defects might share a common genetic basis. This possibility is supported by our discovery that recombination is reduced dramatically in a cross involving a parent with the hms1-hms2 incompatibility.

  1. Evidence of natural selection acting on a polymorphic hybrid incompatibility locus in Mimulus.

    Science.gov (United States)

    Sweigart, Andrea L; Flagel, Lex E

    2015-02-01

    As a common cause of reproductive isolation in diverse taxa, hybrid incompatibilities are fundamentally important to speciation. A key question is which evolutionary forces drive the initial substitutions within species that lead to hybrid dysfunction. Previously, we discovered a simple genetic incompatibility that causes nearly complete male sterility and partial female sterility in hybrids between the two closely related yellow monkeyflower species Mimulus guttatus and M. nasutus. In this report, we fine map the two major incompatibility loci-hybrid male sterility 1 (hms1) and hybrid male sterility 2 (hms2)-to small nuclear genomic regions (each <70 kb) that include strong candidate genes. With this improved genetic resolution, we also investigate the evolutionary dynamics of hms1 in a natural population of M. guttatus known to be polymorphic at this locus. Using classical genetic crosses and population genomics, we show that a 320-kb region containing the hms1 incompatibility allele has risen to intermediate frequency in this population by strong natural selection. This finding provides direct evidence that natural selection within plant species can lead to hybrid dysfunction between species. Copyright © 2015 by the Genetics Society of America.

  2. Selfish evolution of cytonuclear hybrid incompatibility in Mimulus.

    Science.gov (United States)

    Case, Andrea L; Finseth, Findley R; Barr, Camille M; Fishman, Lila

    2016-09-14

    Intraspecific coevolution between selfish elements and suppressors may promote interspecific hybrid incompatibility, but evidence of this process is rare. Here, we use genomic data to test alternative models for the evolution of cytonuclear hybrid male sterility in Mimulus In hybrids between Iron Mountain (IM) Mimulus guttatus × Mimulus nasutus, two tightly linked M. guttatus alleles (Rf1/Rf2) each restore male fertility by suppressing a local mitochondrial male-sterility gene (IM-CMS). Unlike neutral models for the evolution of hybrid incompatibility loci, selfish evolution predicts that the Rf alleles experienced strong selection in the presence of IM-CMS. Using whole-genome sequences, we compared patterns of population-genetic variation in Rf at IM to a neighbouring population that lacks IM-CMS. Consistent with local selection in the presence of IM-CMS, the Rf region shows elevated FST, high local linkage disequilibrium and a distinct haplotype structure at IM, but not at Cone Peak (CP), suggesting a recent sweep in the presence of IM-CMS. In both populations, Rf2 exhibited lower polymorphism than other regions, but the low-diversity outliers were different between CP and IM. Our results confirm theoretical predictions of ubiquitous cytonuclear conflict in plants and provide a population-genetic mechanism for the evolution of a common form of hybrid incompatibility. © 2016 The Author(s).

  3. Occurrence of nitro- and oxy-PAHs in agricultural soils in eastern China and excess lifetime cancer risks from human exposure through soil ingestion.

    Science.gov (United States)

    Sun, Zhe; Zhu, Ying; Zhuo, Shaojie; Liu, Weiping; Zeng, Eddy Y; Wang, Xilong; Xing, Baoshan; Tao, Shu

    2017-11-01

    The quality of agricultural soil is vital to human health, however soil contamination is a severe problem in China. Polycyclic aromatic hydrocarbons (PAHs) have been found to be among the major soil contaminants in China. PAH derivatives could be more toxic but their measurements in soils are extremely limited. This study reports levels, spatial distributions and compositions of 11 nitrated (nPAHs) and 4 oxygenated PAHs (oPAHs) in agricultural soils covering 26 provinces in eastern China to fill the data gap. The excess lifetime cancer risk (ELCR) from the exposure to them in addition to 21 parent PAHs (pPAHs) via soil ingestion has been estimated. The mean concentration of ∑nPAHs and ∑oPAHs in agricultural soils is 50±45μg/kg and 9±8μg/kg respectively. Both ∑nPAHs and ∑oPAHs follow a similar spatial distribution pattern with elevated concentrations found in Liaoning, Shanxi, Henan and Guizhou. However if taking account of pPAHs, the high ELCR by soil ingestion is estimated for Shanxi, Zhejiang, Liaoning, Jiangsu and Hubei. The maximum ELCR is estimated at ca.10 -5 by both deterministic and probabilistic studies with moderate toxic equivalent factors (TEFs). If maximum TEFs available are applied, there is a 0.2% probability that the ELCR will exceed 10 -4 in the areas covered. There is a great chance to underestimate the ELCR via soil ingestion for some regions if only the 16 priority PAHs in agricultural soils are considered. The early life exposure and burden are considered extremely important to ELCR. Emission sources are qualitatively predicted and for areas with higher ELCR such as Shanxi and Liaoning, new loadings of PAHs and derivatives are identified. This is the first large scale study on nPAHs and oPAHs contamination levels in agricultural soils in China. The risk assessment based on this underpins the policy making and is valuable for both scientists and policy makers. Copyright © 2017 Elsevier Ltd. All rights reserved.

  4. Transgenerational Effects Alter Plant Defense and Resistance in Nature

    Science.gov (United States)

    Colicchio, Jack

    2017-01-01

    Trichomes, or leaf hairs, are epidermal extensions that take a variety of forms and perform many functions in plants, including herbivore defense. In this study, I document genetically determined variation, within-generation plasticity, and a direct role of trichomes in herbivore defense for Mimulus guttatus. After establishing the relationship between trichomes and herbivory, I test for transgenerational effects of wounding on trichome density and herbivore resistance. Patterns of inter-annual variation in herbivore density and the high cost of plant defense makes plant-herbivore interactions a system in which transgenerational phenotypic plasticity (TPP) is apt to evolve. Here, I demonstrate that parental damage alters offspring trichome density and herbivore resistance in nature. Moreover, this response varies between populations. This is among the first studies to demonstrate that TPP contributes to variation in nature, and also suggests that selection can modify TPP in response to local conditions. PMID:28102915

  5. Diversity and Abundance of a Tropical Fishery on the Pacific Shelf of Michoacán, México

    Science.gov (United States)

    Madrid, J.; Sánchez, P.; Ruiz, A.

    1997-10-01

    This study was undertaken on the Pacific coast of Mexico. Some 22 523 individual fish were sampled, representing two classes, 154 genera, 64 families and 257 species in a total area of 50 km 2. The species Lutjanus guttatus, Scomberomorus sierra, Cynoscion reticulatus, Sphyrna lewini, Arius platypogonand Caranx caninuswere the most numerically abundant, amounting to 53·2% of the whole sample. Two models for sample size analysis and richness prediction were used. From these, the forecast for a theoretical doubling of the level of sampling effort (90 days) was 297 and 331. The Shannon diversity indexes in summer (June-August) and winter (December-February) were significantly different (paired t-test, PUPGMA) indicated two climatic periods and three species assemblages. In addition, the nodal fidelity analysis agreed with the importance of the winter season in the study area. Two El Niño/southern oscillation incidences from 1986-87 and 1991-93 occurred during the sampling period.

  6. Dicty_cDB: Contig-U16287-1 [Dicty_cDB

    Lifescience Database Archive (English)

    Full Text Available zed ... 46 0.12 2 ( CK269023 ) EST715101 potato abiotic stress cDNA library Sola... 46 0.12 2 ( U54774 ) Nicotiana tabacu...a... 36 0.26 3 ( DV114899 ) CV03010A1H02.f1 CV03-normalized library Euphorbia... 36 0.26 3 ( BT013106 ) Lycopersicon esculentu...mate decarboxylase isozyme... 58 1e-06 2 ( CK273593 ) EST719671 potato abiotic stress cDNA library Sola... 5... from flowers,8... 62 7e-05 1 ( CV516768 ) 0048P0016Z_H01_SP6 Mimulus guttatus library 1 Mim... 62...e-04 1 ( CK278060 ) EST724138 potato abiotic stress cDNA library Sola... 60 3e-04 1 ( AP009552 ) Microcystis

  7. Dicty_cDB: Contig-U01505-1 [Dicty_cDB

    Lifescience Database Archive (English)

    Full Text Available y1 Gm-c1004 Glycine max cDNA clone GENOME... 32 3.7 2 ( DV211690 ) 0089P0160Z_H09_T7 Mimulus guttatus library 2 Mimu...38TG Tetrahymena thermophila EST library str... 38 2.5 2 ( AC177658 ) Strongylocentrotus purpuratus clone R3...6 1.4 1 ( BG041778 ) saa41a04.y1 Gm-c1059 Glycine soja cDNA clone GENO... 46 1.4 1 ( BF645094 ) NF034E10EC1F1082 Elicited cell cultur...e Medicago t... 46 1.4 1 ( BF644741 ) NF014E01EC1F1005 Elicited cell culture Medica...a oleracea var. alboglabra EST, clone AAF... 44 5.4 1 ( CN828044 ) EL2662R Brassica embryo library (EL) Brassic

  8. Fine-scale variation in meiotic recombination in Mimulus inferred from population shotgun sequencing

    Energy Technology Data Exchange (ETDEWEB)

    Hellsten, Uffe [USDOE Joint Genome Inst., Walnut Creek, CA (United States); Wright, Kevin M. [Harvard Univ., Cambridge, MA (United States); Jenkins, Jerry [USDOE Joint Genome Inst., Walnut Creek, CA (United States); HudsonAlpha Inst. of Biotechnology, Huntsville, AL (United States); Shu, Shengqiang [USDOE Joint Genome Inst., Walnut Creek, CA (United States); Yuan, Yao-Wu [Univ. of Connecticut, Storrs, CT (United States); Wessler, Susan R. [Univ. of California, Riverside, CA (United States); Schmutz, Jeremy [USDOE Joint Genome Inst., Walnut Creek, CA (United States); HudsonAlpha Inst. of Biotechnology, Huntsville, AL (United States); Willis, John H. [Duke Univ., Durham, NC (United States); Rokhsar, Daniel S. [USDOE Joint Genome Inst., Walnut Creek, CA (United States); Univ. of California, Berkeley, CA (United States)

    2013-11-13

    Meiotic recombination rates can vary widely across genomes, with hotspots of intense activity interspersed among cold regions. In yeast, hotspots tend to occur in promoter regions of genes, whereas in humans and mice hotspots are largely defined by binding sites of the PRDM9 protein. To investigate the detailed recombination pattern in a flowering plant we use shotgun resequencing of a wild population of the monkeyflower Mimulus guttatus to precisely locate over 400,000 boundaries of historic crossovers or gene conversion tracts. Their distribution defines some 13,000 hotspots of varying strengths, interspersed with cold regions of undetectably low recombination. Average recombination rates peak near starts of genes and fall off sharply, exhibiting polarity. Within genes, recombination tracts are more likely to terminate in exons than in introns. The general pattern is similar to that observed in yeast, as well as in PRDM9-knockout mice, suggesting that recombination initiation described here in Mimulus may reflect ancient and conserved eukaryotic mechanisms

  9. The role of otolith size in hearing – Insights from cichlid fishes

    Directory of Open Access Journals (Sweden)

    Tanja Schulz-Mirbach

    2015-10-01

    Full Text Available Otolithic end organs in fishes function as accelerometers and are involved in the senses of balance and hearing (e.g. Popper et al. 2005. Otolith mass and shape are likely decisive factors influencing otolith motion, but while it is largely unknown how different shapes affect otolith movement relative to the sensory epithelium (Popper et al. 2005, greater otolith mass is predicted to result in enhanced stimulation of sensory hair cells and improved hearing (Lychakov and Rebane 2005. What few studies exist on this topic, however, yielded contradicting results in that they did or did not find a correlation between increased otolith mass and enhanced hearing (see Kéver et al. 2014. We investigated the relationship between otolith morphology (including 3D-models of otoliths based on high-resolution microCT imaging and otolith weight and hearing abilities in cichlids while comparing three species (Etroplus maculatus, Hemichromis guttatus, Steatocranus tinanti with different swimbladder morphology and hearing abilities (Schulz-Mirbach et al. 2014. We predicted Etroplus maculatus—the species that displays the best hearing sensitivities—to possess larger/heavier otoliths. As swimbladder extensions in this species are connected to the lagena, we further predicted to find heavier lagenar otoliths. Compared to H. guttatus and S. tinanti, E. maculatus showed the heaviest saccular otoliths, while lagenar otoliths were significantly thinner and lighter than in the former two species, apparently contradicting the hypothesis that the lagena and its otolith are primarily involved in improved hearing abilities. Our results support the idea that there is no ‘simple’ relationship between otolith weight, ancilliary auditory structures and hearing abilities. 3D-models of inner ears and otoliths may be ideally suited for future studies modeling complex otolith motion and thus, may provide a better understanding of how otolith morphology contributes to inner

  10. Hypothalamic expression and moonlight-independent changes of Cry3 and Per4 implicate their roles in lunar clock oscillators of the lunar-responsive Goldlined spinefoot.

    Science.gov (United States)

    Toda, Riko; Okano, Keiko; Takeuchi, Yuki; Yamauchi, Chihiro; Fukushiro, Masato; Takemura, Akihiro; Okano, Toshiyuki

    2014-01-01

    Lunar cycle-associated physiology has been found in a wide variety of organisms. Studies suggest the presence of a circalunar clock in some animals, but the location of the lunar clock is unclear. We previously found lunar-associated expression of transcripts for Cryptochrome3 gene (SgCry3) in the brain of a lunar phase-responsive fish, the Goldlined spinefoot (Siganus guttatus). Then we proposed a photoperiodic model for the lunar phase response, in which SgCry3 might function as a phase-specific light response gene and/or an oscillatory factor in unidentified circalunar clock. In this study, we have developed an anti-SgCRY3 antibody to identify SgCRY3-immunoreactive cells in the brain. We found immunoreactions in the subependymal cells located in the mediobasal region of the diencephalon, a crucial site for photoperiodic seasonal responses in birds. For further assessment of the lunar-responding mechanism and the circalunar clock, we investigated mRNA levels of Cry3 as well as those of the other clock(-related) genes, Period (Per2 and Per4), in S. guttatus reared under nocturnal moonlight interruption or natural conditions. Not only SgCry3 but SgPer4 mRNA levels showed lunar phase-dependent variations in the diencephalon without depending on light condition during the night. These results suggest that the expressions of SgCry3 and SgPer4 are not directly regulated by moonlight stimulation but endogenously mediated in the brain, and implicate that circadian clock(-related) genes may be involved in the circalunar clock locating within the mediobasal region of the diencephalon.

  11. Variation in reward quality and pollinator attraction: the consumer does not always get it right.

    Science.gov (United States)

    Carr, David E; Haber, Ariela I; LeCroy, Kathryn A; Lee, De'Ashia E; Link, Rosabeth I

    2015-04-09

    Nearly all bees rely on pollen as the sole protein source for the development of their larvae. The central importance of pollen for the bee life cycle should exert strong selection on their ability to locate the most rewarding sources of pollen. Despite this importance, very few studies have examined the influence of intraspecific variation in pollen rewards on the foraging decisions of bees. Previous studies have demonstrated that inbreeding reduces viability and hence protein content in Mimulus guttatus (seep monkeyflower) pollen and that bees strongly discriminate against inbred in favour of outbred plants. We examined whether variation in pollen viability could explain this preference using a series of choice tests with living plants, artificial plants and olfactometer tests using the bumble bee Bombus impatiens. We found that B. impatiens preferred to visit artificial plants provisioned with fertile anthers over those provisioned with sterile anthers. They also preferred fertile anthers when provided only olfactory cues. These bumble bees were unable to discriminate among live plants from subpopulations differing dramatically in pollen viability, however. They preferred outbred plants even when those plants were from subpopulations with pollen viability as low as the inbred populations. Their preference for outbred plants was evident even when only olfactory cues were available. Our data showed that bumble bees are able to differentiate between anthers that provide higher rewards when cues are isolated from the rest of the flower. When confronted with cues from the entire flower, their choices are independent of the quality of the pollen reward, suggesting that they are responding more strongly to cues unassociated with rewards than to those correlated with rewards. If so, this suggests that a sensory bias or some level of deception may be involved with advertisement to pollinators in M. guttatus. Published by Oxford University Press on behalf of the Annals of

  12. Selection on plant male function genes identifies candidates for reproductive isolation of yellow monkeyflowers.

    Directory of Open Access Journals (Sweden)

    Jan E Aagaard

    Full Text Available Understanding the genetic basis of reproductive isolation promises insight into speciation and the origins of biological diversity. While progress has been made in identifying genes underlying barriers to reproduction that function after fertilization (post-zygotic isolation, we know much less about earlier acting pre-zygotic barriers. Of particular interest are barriers involved in mating and fertilization that can evolve extremely rapidly under sexual selection, suggesting they may play a prominent role in the initial stages of reproductive isolation. A significant challenge to the field of speciation genetics is developing new approaches for identification of candidate genes underlying these barriers, particularly among non-traditional model systems. We employ powerful proteomic and genomic strategies to study the genetic basis of conspecific pollen precedence, an important component of pre-zygotic reproductive isolation among yellow monkeyflowers (Mimulus spp. resulting from male pollen competition. We use isotopic labeling in combination with shotgun proteomics to identify more than 2,000 male function (pollen tube proteins within maternal reproductive structures (styles of M. guttatus flowers where pollen competition occurs. We then sequence array-captured pollen tube exomes from a large outcrossing population of M. guttatus, and identify those genes with evidence of selective sweeps or balancing selection consistent with their role in pollen competition. We also test for evidence of positive selection on these genes more broadly across yellow monkeyflowers, because a signal of adaptive divergence is a common feature of genes causing reproductive isolation. Together the molecular evolution studies identify 159 pollen tube proteins that are candidate genes for conspecific pollen precedence. Our work demonstrates how powerful proteomic and genomic tools can be readily adapted to non-traditional model systems, allowing for genome-wide screens

  13. A widespread chromosomal inversion polymorphism contributes to a major life-history transition, local adaptation, and reproductive isolation.

    Directory of Open Access Journals (Sweden)

    David B Lowry

    2010-09-01

    Full Text Available The role of chromosomal inversions in adaptation and speciation is controversial. Historically, inversions were thought to contribute to these processes either by directly causing hybrid sterility or by facilitating the maintenance of co-adapted gene complexes. Because inversions suppress recombination when heterozygous, a recently proposed local adaptation mechanism predicts that they will spread if they capture alleles at multiple loci involved in divergent adaptation to contrasting environments. Many empirical studies have found inversion polymorphisms linked to putatively adaptive phenotypes or distributed along environmental clines. However, direct involvement of an inversion in local adaptation and consequent ecological reproductive isolation has not to our knowledge been demonstrated in nature. In this study, we discovered that a chromosomal inversion polymorphism is geographically widespread, and we test the extent to which it contributes to adaptation and reproductive isolation under natural field conditions. Replicated crosses between the prezygotically reproductively isolated annual and perennial ecotypes of the yellow monkeyflower, Mimulus guttatus, revealed that alternative chromosomal inversion arrangements are associated with life-history divergence over thousands of kilometers across North America. The inversion polymorphism affected adaptive flowering time divergence and other morphological traits in all replicated crosses between four pairs of annual and perennial populations. To determine if the inversion contributes to adaptation and reproductive isolation in natural populations, we conducted a novel reciprocal transplant experiment involving outbred lines, where alternative arrangements of the inversion were reciprocally introgressed into the genetic backgrounds of each ecotype. Our results demonstrate for the first time in nature the contribution of an inversion to adaptation, an annual/perennial life-history shift, and

  14. Hypothalamic expression and moonlight-independent changes of Cry3 and Per4 implicate their roles in lunar clock oscillators of the lunar-responsive Goldlined spinefoot.

    Directory of Open Access Journals (Sweden)

    Riko Toda

    Full Text Available Lunar cycle-associated physiology has been found in a wide variety of organisms. Studies suggest the presence of a circalunar clock in some animals, but the location of the lunar clock is unclear. We previously found lunar-associated expression of transcripts for Cryptochrome3 gene (SgCry3 in the brain of a lunar phase-responsive fish, the Goldlined spinefoot (Siganus guttatus. Then we proposed a photoperiodic model for the lunar phase response, in which SgCry3 might function as a phase-specific light response gene and/or an oscillatory factor in unidentified circalunar clock. In this study, we have developed an anti-SgCRY3 antibody to identify SgCRY3-immunoreactive cells in the brain. We found immunoreactions in the subependymal cells located in the mediobasal region of the diencephalon, a crucial site for photoperiodic seasonal responses in birds. For further assessment of the lunar-responding mechanism and the circalunar clock, we investigated mRNA levels of Cry3 as well as those of the other clock(-related genes, Period (Per2 and Per4, in S. guttatus reared under nocturnal moonlight interruption or natural conditions. Not only SgCry3 but SgPer4 mRNA levels showed lunar phase-dependent variations in the diencephalon without depending on light condition during the night. These results suggest that the expressions of SgCry3 and SgPer4 are not directly regulated by moonlight stimulation but endogenously mediated in the brain, and implicate that circadian clock(-related genes may be involved in the circalunar clock locating within the mediobasal region of the diencephalon.

  15. The intake of water containing a mix of pollutants at environmentally relevant concentrations leads to defensive response deficit in male C57Bl/6J mice.

    Science.gov (United States)

    de Souza, Joyce Moreira; Rabelo, Letícia Martins; de Faria, Denise Braga Gomes; Guimarães, Abraão Tiago Batista; da Silva, Wellington Alves Mizael; Rocha, Thiago Lopes; Estrela, Fernanda Neves; Chagas, Thales Quintão; de Oliveira Mendes, Bruna; Malafaia, Guilherme

    2018-07-01

    Previous studies have individually confirmed the toxic effects from different pollutants on mammals. However, effects resulting from the exposure of these animals to multi-pollutant mixes have not been studied so far. Thus, the aim of the current study is to assess the effect from the chronic exposure (105days) of C57Bl/6J mice to a mix of pollutants on their response to potential predators. In order to do so, the following groups were formed: "control", "Mix 1× [compounds from 15 pollutants identified in surface waters at environmentally relevant concentration (ERC)]", "Mix 10×" and "Mix 25×" (concentrations 10 and 25 times higher than the ERC). From the 100th experimental day on, the animals were subjected to tests in order to investigate whether they showed locomotor, visual, olfactory and auditory changes, since these abilities are essential to their anti-predatory behavior. Next, the animals' behavior towards potential predators (Felis catus and Pantherophis guttatus) was assessed. The herein collected data did not show defensive response from any of the experimental groups to the predatory stimulus provided by P. guttatus. However, the control animals, only, presented anti-predatory behavior when F. catus was introduced in the apparatus, fact that suggests defensive response deficit resulting from the treatments. Thus, the current study is pioneer in showing that the chronic intake of water containing a mix of pollutants (even at low concentrations) leads to behavioral disorders able to affect the survival and population dynamics of mammalian species at ecological level. Copyright © 2018 Elsevier B.V. All rights reserved.

  16. Chemical composition and speciation of particulate organic matter from modern residential small-scale wood combustion appliances.

    Science.gov (United States)

    Czech, Hendryk; Miersch, Toni; Orasche, Jürgen; Abbaszade, Gülcin; Sippula, Olli; Tissari, Jarkko; Michalke, Bernhard; Schnelle-Kreis, Jürgen; Streibel, Thorsten; Jokiniemi, Jorma; Zimmermann, Ralf

    2018-01-15

    Combustion technologies of small-scale wood combustion appliances are continuously developed decrease emissions of various pollutants and increase energy conversion. One strategy to reduce emissions is the implementation of air staging technology in secondary air supply, which became an established technique for modern wood combustion appliances. On that account, emissions from a modern masonry heater fuelled with three types of common logwood (beech, birch and spruce) and a modern pellet boiler fuelled with commercial softwood pellets were investigated, which refer to representative combustion appliances in northern Europe In particular, emphasis was put on the organic constituents of PM2.5, including polycyclic aromatic hydrocarbons (PAHs), oxygenated PAHs (OPAHs) and phenolic species, by targeted and non-targeted mass spectrometric analysis techniques. Compared to conventional wood stoves and pellet boilers, organic emissions from the modern appliances were reduced by at least one order of magnitude, but to a different extent for single species. Hence, characteristic ratios of emission constituents and emission profiles for wood combustion identification and speciation do not hold for this type of advanced combustion technology. Additionally, an overall substantial reduction of typical wood combustion markers, such as phenolic species and anhydrous sugars, were observed. Finally, it was found that slow ignition of log woods changes the distribution of characteristic resin acids and phytosterols as well as their thermal alteration products, which are used as markers for specific wood types. Our results should be considered for wood combustion identification in positive matrix factorisation or chemical mass balance in northern Europe. Copyright © 2017 Elsevier B.V. All rights reserved.

  17. The role of cold cues at different life stages on germination and flowering phenology.

    Science.gov (United States)

    Rubin, Matthew J; Friedman, Jannice

    2018-04-23

    The timing of major phenological transitions is critical to lifetime fitness, and life history theory predicts differences for annual and perennial plants. To correctly time these transitions, many plants rely on environmental cues such as exposure to extended periods of cold, which may occur at different stages throughout their lifetime. We studied the role of cold at different life stages, by jointly exposing seed (stratification) and rosettes (vernalization) to cold. We used 23 populations of Mimulus guttatus, which vary from annuals to perennials, and investigated how cold at one or both stages affected germination, flowering, growth, and biomass. We found that stratification and vernalization interact to affect life cycle transitions, and that cold at either stage could synchronize flowering phenology. For perennials, either stratification or vernalization is necessary for maximum flowering. We also found that germination timing covaried with later traits. Moreover, plants from environments with dissimilar climates displayed different phenological responses to stratification or vernalization. In general, cold is more important for seed germination in annuals and plants from environments with warm temperatures and variable precipitation. In contrast, cold is more important for flowering in perennials: it accelerates flowering in plants from lower precipitation environments, and it increases flowering proportion in plants from cooler, more stable precipitation environments. We discuss our findings in the context of the variable environments plants experience within a population and the variation encountered across the biogeographic native range of the species. © 2018 Botanical Society of America.

  18. Detection of Cryptosporidium species in feces or gastric contents from snakes and lizards as determined by polymerase chain reaction analysis and partial sequencing of the 18S ribosomal RNA gene.

    Science.gov (United States)

    Richter, Barbara; Nedorost, Nora; Maderner, Anton; Weissenböck, Herbert

    2011-05-01

    Cryptosporidiosis is a well-known gastrointestinal disease of snakes and lizards. In the current study, 672 samples (feces and/or gastric contents or regurgitated food items) of various snakes and lizards were examined for the presence of cryptosporidia by polymerase chain reaction (PCR) assay targeting a part of the 18S ribosomal RNA gene. A consecutive sequencing reaction was used to identify the cryptosporidian species present in PCR-positive samples. Cryptosporidium varanii (saurophilum) was detected in 17 out of 106 (16%) samples from corn snakes (Pantherophis guttatus) and in 32 out of 462 (7%) samples from leopard geckos (Eublepharis macularius). Cryptosporidium serpentis was found in 8 out of 462 (2%) leopard gecko samples, but in no other reptile. The Cryptosporidium sp. "lizard genotype" was present in 1 leopard gecko sample, and 1 sample from a corn snake showed a single nucleotide mismatch to this genotype. Pseudoparasitic cryptosporidian species were identified in 5 out of 174 (3%) ophidian samples, but not in lizards. Other sequences did not show complete similarity to previously published Cryptosporidium sequences. The results stress the importance for diagnostic methods to be specific for Cryptosporidium species especially in snakes and show a relatively high prevalence of C. varanii in leopard geckos and corn snakes. © 2011 The Author(s)

  19. Lunar phase-dependent expression of cryptochrome and a photoperiodic mechanism for lunar phase-recognition in a reef fish, goldlined spinefoot.

    Science.gov (United States)

    Fukushiro, Masato; Takeuchi, Takahiro; Takeuchi, Yuki; Hur, Sung-Pyo; Sugama, Nozomi; Takemura, Akihiro; Kubo, Yoko; Okano, Keiko; Okano, Toshiyuki

    2011-01-01

    Lunar cycle-associated physiology has been found in a wide variety of organisms. Recent study has revealed that mRNA levels of Cryptochrome (Cry), one of the circadian clock genes, were significantly higher on a full moon night than on a new moon night in coral, implying the involvement of a photoreception system in the lunar-synchronized spawning. To better establish the generalities surrounding such a mechanism and explore the underlying molecular mechanism, we focused on the relationship between lunar phase, Cry gene expression, and the spawning behavior in a lunar-synchronized spawner, the goldlined spinefoot (Siganus guttatus), and we identified two kinds of Cry genes in this animal. Their mRNA levels showed lunar cycle-dependent expression in the medial part of the brain (mesencephalon and diencephalon) peaking at the first quarter moon. Since this lunar phase coincided with the reproductive phase of the goldlined spinefoot, Cry gene expression was considered a state variable in the lunar phase recognition system. Based on the expression profiles of SgCrys together with the moonlight's pattern of timing and duration during its nightly lunar cycle, we have further speculated on a model of lunar phase recognition for reproductive control in the goldlined spinefoot, which integrates both moonlight and circadian signals in a manner similar to photoperiodic response.

  20. Heavy metals contamination in fish and shrimp from coastal regions of karachi, pakistan

    International Nuclear Information System (INIS)

    Ali, S.S.

    2013-01-01

    in the present study, the heavy metals (Pb, Cu, Cd, Fe, Zn) concentration was determined by using atomic absorption spectrophotometer (AAS) in 5 species of fish and 3 species of shrimp commonly taken by locals at the coastal regions of Karachi, Pakistan Concentrations of Cd and Pb studied in tissues of Mushka (Otolithes ruber; 0.120 and 1.018 micro g/ wet weight) and palaemon longirostris shrimp (2.457 and 0.480 micro g/g wet weight) were found near to safe level for human consumption. Mullet, Tarli, Surmai, Dohtar fishes and Blacktiger shrimp were found contaminated by Cd and Pb but still within the limits fit for and human consumption. the distribution of trace metals detected in all fish and shrimp species followed the order of Zn >Pb> Fe>Cu> Cd and Cd> Fe > Zn> Cu>Ph, respectively. Metal concentration exhibited significant species variation and followed the order In fishes as otolithes ruber> Liza vaigiensis>sardinella albella>Scomberomorus guttatus>pomadasys olivaecum and in shrimp as palaemon longirostris>penaeus monodon> penaeus penicillatu. (author)

  1. Novel parvoviruses in reptiles and genome sequence of a lizard parvovirus shed light on Dependoparvovirus genus evolution.

    Science.gov (United States)

    Pénzes, Judit J; Pham, Hanh T; Benkö, Mária; Tijssen, Peter

    2015-09-01

    Here, we report the detection and partial genome characterization of two novel reptilian parvoviruses derived from a short-tailed pygmy chameleon (Rampholeon brevicaudatus) and a corn snake (Pantherophis guttatus) along with the complete genome analysis of the first lizard parvovirus, obtained from four bearded dragons (Pogona vitticeps). Both homology searches and phylogenetic tree reconstructions demonstrated that all are members of the genus Dependoparvovirus. Even though most dependoparvoviruses replicate efficiently only in co-infections with large DNA viruses, no such agents could be detected in one of the bearded dragon samples, hence the possibility of autonomous replication was explored. The alternative ORF encoding the full assembly activating protein (AAP), typical for the genus, could be obtained from reptilian parvoviruses for the first time, with a structure that appears to be more ancient than that of avian and mammalian parvoviruses. All three viruses were found to harbour short introns as previously observed for snake adeno-associated virus, shorter than that of any non-reptilian dependoparvovirus. According to the phylogenetic calculations based on full non-structural protein (Rep) and AAP sequences, the monophyletic cluster of reptilian parvoviruses seems to be the most basal out of all lineages of genus Dependoparvovirus. The suspected ability for autonomous replication, results of phylogenetic tree reconstruction, intron lengths and the structure of the AAP suggested that a single Squamata origin instead of the earlier assumed diapsid (common avian-reptilian) origin is more likely for the genus Dependoparvovirus of the family Parvoviridae.

  2. Activity evaluation from different native or irradiated with {sup 60} Co gamma rays snake venoms and their inhibitory effect on Leishmania (Leishmania) amazonensis; Avaliacao da atividade de diferentes venenos de serpentes, nativos ou irradiados, com radiacao gama de {sup 60} Co, quanto ao poder inibitorio do crescimento de Leishmania (Leishmania) amazonensis

    Energy Technology Data Exchange (ETDEWEB)

    Lourenco, Cecilia de Oliveira

    2000-07-01

    Cutaneous leishmaniasis is a disease, caused by Leishmania parasites, that occurs frequently in tropical and sub-tropical regions of the world. Skin lesions that could results in disfiguring aspect characterize it. The treatment is based on few drugs as antimony salts or pentamidine that are toxic with increasing resistance by the parasite. Alternative forms of disease treatment are in constant search, including natural components as snake venoms. Previous studies demonstrate that some components of snake venoms have an inhibitory effect against those parasites, including Leishmania species. Although snake venoms presented high toxicity, several methods have been described to detoxify most or some of their toxic components, with favorable results by the use of gamma irradiation. In this report we tested several native and irradiated snake venoms for inhibitory effect against Leishmania (Leishmania) amazonensis parasite and LLCMK{sub 2} mammalian cells, with enzymatic tests and electrophoresis. There are significant activity in Acanthophis antarcticus, Agkistrodon bilineatus, Bothrops moojeni, Bothrops jararaca, Hoplocephalus stephensi, Naja melanoleuca, Naja mossambica, Pseudechis australis, Pseudechis colletti, Pseudechis guttatus and Pseudechis porphyriacus, venom being inactive Pseudonaja textilis, Notechis ater niger, Notechis scutatus. Oxyuranus microlepidotus and Oxyuranus scutellatus venoms. After 2 KGy of {sup 60}Co irradiation most venom loses significantly their activity. Venoms with antileishmanial activity presented L-amino acid oxidase (L-AO) activity and showed common protein with a molecular weight about 60kDa in SDS-PAGE. These results indicate that L-AO activity in those venoms are probably related with antileishmanial effect. (author)

  3. Overtone-based pitch selection in hermit thrush song: unexpected convergence with scale construction in human music.

    Science.gov (United States)

    Doolittle, Emily L; Gingras, Bruno; Endres, Dominik M; Fitch, W Tecumseh

    2014-11-18

    Many human musical scales, including the diatonic major scale prevalent in Western music, are built partially or entirely from intervals (ratios between adjacent frequencies) corresponding to small-integer proportions drawn from the harmonic series. Scientists have long debated the extent to which principles of scale generation in human music are biologically or culturally determined. Data from animal "song" may provide new insights into this discussion. Here, by examining pitch relationships using both a simple linear regression model and a Bayesian generative model, we show that most songs of the hermit thrush (Catharus guttatus) favor simple frequency ratios derived from the harmonic (or overtone) series. Furthermore, we show that this frequency selection results not from physical constraints governing peripheral production mechanisms but from active selection at a central level. These data provide the most rigorous empirical evidence to date of a bird song that makes use of the same mathematical principles that underlie Western and many non-Western musical scales, demonstrating surprising convergence between human and animal "song cultures." Although there is no evidence that the songs of most bird species follow the overtone series, our findings add to a small but growing body of research showing that a preference for small-integer frequency ratios is not unique to humans. These findings thus have important implications for current debates about the origins of human musical systems and may call for a reevaluation of existing theories of musical consonance based on specific human vocal characteristics.

  4. Activity evaluation from different native or irradiated with 60 Co gamma rays snake venoms and their inhibitory effect on Leishmania (Leishmania) amazonensis

    International Nuclear Information System (INIS)

    Lourenco, Cecilia de Oliveira

    2000-01-01

    Cutaneous leishmaniasis is a disease, caused by Leishmania parasites, that occurs frequently in tropical and sub-tropical regions of the world. Skin lesions that could results in disfiguring aspect characterize it. The treatment is based on few drugs as antimony salts or pentamidine that are toxic with increasing resistance by the parasite. Alternative forms of disease treatment are in constant search, including natural components as snake venoms. Previous studies demonstrate that some components of snake venoms have an inhibitory effect against those parasites, including Leishmania species. Although snake venoms presented high toxicity, several methods have been described to detoxify most or some of their toxic components, with favorable results by the use of gamma irradiation. In this report we tested several native and irradiated snake venoms for inhibitory effect against Leishmania (Leishmania) amazonensis parasite and LLCMK 2 mammalian cells, with enzymatic tests and electrophoresis. There are significant activity in Acanthophis antarcticus, Agkistrodon bilineatus, Bothrops moojeni, Bothrops jararaca, Hoplocephalus stephensi, Naja melanoleuca, Naja mossambica, Pseudechis australis, Pseudechis colletti, Pseudechis guttatus and Pseudechis porphyriacus, venom being inactive Pseudonaja textilis, Notechis ater niger, Notechis scutatus. Oxyuranus microlepidotus and Oxyuranus scutellatus venoms. After 2 KGy of 60 Co irradiation most venom loses significantly their activity. Venoms with antileishmanial activity presented L-amino acid oxidase (L-AO) activity and showed common protein with a molecular weight about 60kDa in SDS-PAGE. These results indicate that L-AO activity in those venoms are probably related with antileishmanial effect. (author)

  5. Hitchhiking to speciation.

    Directory of Open Access Journals (Sweden)

    Daven C Presgraves

    Full Text Available The modern evolutionary synthesis codified the idea that species exist as distinct entities because intrinsic reproductive barriers prevent them from merging together. Understanding the origin of species therefore requires understanding the evolution and genetics of reproductive barriers between species. In most cases, speciation is an accident that happens as different populations adapt to different environments and, incidentally, come to differ in ways that render them reproductively incompatible. As with other reproductive barriers, the evolution and genetics of interspecific hybrid sterility and lethality were once also thought to evolve as pleiotripic side effects of adaptation. Recent work on the molecular genetics of speciation has raised an altogether different possibility-the genes that cause hybrid sterility and lethality often come to differ between species not because of adaptation to the external ecological environment but because of internal evolutionary arms races between selfish genetic elements and the genes of the host genome. Arguably one of the best examples supporting a role of ecological adaptation comes from a population of yellow monkey flowers, Mimulus guttatus, in Copperopolis, California, which recently evolved tolerance to soil contaminants from copper mines and simultaneously, as an incidental by-product, hybrid lethality in crosses with some off-mine populations. However, in new work, Wright and colleagues show that hybrid lethality is not a pleiotropic consequence of copper tolerance. Rather, the genetic factor causing hybrid lethality is tightly linked to copper tolerance and spread to fixation in Copperopolis by genetic hitchhiking.

  6. Transgenerational effects alter plant defence and resistance in nature.

    Science.gov (United States)

    Colicchio, J

    2017-04-01

    Trichomes, or leaf hairs, are epidermal extensions that take a variety of forms and perform many functions in plants, including herbivore defence. In this study, I document genetically determined variation, within-generation plasticity, and a direct role of trichomes in herbivore defence for Mimulus guttatus. After establishing the relationship between trichomes and herbivory, I test for transgenerational effects of wounding on trichome density and herbivore resistance. Patterns of interannual variation in herbivore density and the high cost of plant defence makes plant-herbivore interactions a system in which transgenerational phenotypic plasticity (TPP) is apt to evolve. Here, I demonstrate that parental damage alters offspring trichome density and herbivore resistance in nature. Moreover, this response varies between populations. This is among the first studies to demonstrate that TPP contributes to variation in nature, and also suggests that selection can modify TPP in response to local conditions. © 2017 European Society For Evolutionary Biology. Journal of Evolutionary Biology © 2017 European Society For Evolutionary Biology.

  7. IMPACT OF CLIMATE ANOMALY ON CATCH COMPOSITION OF NERITIC TUNA IN SUNDA STRAIT

    Directory of Open Access Journals (Sweden)

    Khairul Amri

    2013-12-01

    Full Text Available Tongkol komo/kawakawa (Euthynnus affinis and tenggiri (Scomberomerus guttatus are commonly caught by mini purseiners operated in Sunda Straits and landed in Labuan, West Java. This species inhabits coastal water and has preference staying in relatively warm water. Oceanography parameters commonly influencing the distribution of Euthynnus affinis are temperature, current, and salinity. The oceanography of Sunda Strait is influenced by water masses coming from the north that mainly originated from the Java Sea and water masses from the south mainly originated from Indian Ocean. The internal oceanography of Sunda Strait is also influenced by upwelling and monsoon as regional climate anomaly (ENSO and Indian Ocean Dipole Mode. This paper describes the influence of Dipole Mode (positive and negative event and ENSO (El- Nino/La-Nina to the catch dynamics of neritic tuna particularly in Sunda Straits waters. The results shown that regional climate anomaly influenced neritic tuna catch and its composition. The catches Euthynnus affinis in phase negative dipole mode or La-Nina were higher and dominated the catch composition of pelagic fishes of Sunda Strait. Similar situation also is showen by Scomberomorus commerson.

  8. The Role and Mechanism of Erythrocyte Invasion by Francisella tularensis

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    Deanna M. Schmitt

    2017-05-01

    Full Text Available Francisella tularensis is an extremely virulent bacterium that can be transmitted naturally by blood sucking arthropods. During mammalian infection, F. tularensis infects numerous types of host cells, including erythrocytes. As erythrocytes do not undergo phagocytosis or endocytosis, it remains unknown how F. tularensis invades these cells. Furthermore, the consequence of inhabiting the intracellular space of red blood cells (RBCs has not been determined. Here, we provide evidence indicating that residing within an erythrocyte enhances the ability of F. tularensis to colonize ticks following a blood meal. Erythrocyte residence protected F. tularensis from a low pH environment similar to that of gut cells of a feeding tick. Mechanistic studies revealed that the F. tularensis type VI secretion system (T6SS was required for erythrocyte invasion as mutation of mglA (a transcriptional regulator of T6SS genes, dotU, or iglC (two genes encoding T6SS machinery severely diminished bacterial entry into RBCs. Invasion was also inhibited upon treatment of erythrocytes with venom from the Blue-bellied black snake (Pseudechis guttatus, which aggregates spectrin in the cytoskeleton, but not inhibitors of actin polymerization and depolymerization. These data suggest that erythrocyte invasion by F. tularensis is dependent on spectrin utilization which is likely mediated by effectors delivered through the T6SS. Our results begin to elucidate the mechanism of a unique biological process facilitated by F. tularensis to invade erythrocytes, allowing for enhanced colonization of ticks.

  9. Morphology, development, and evolution of fetal membranes and placentation in squamate reptiles.

    Science.gov (United States)

    Blackburn, Daniel G; Flemming, Alexander F

    2009-09-15

    Current studies on fetal membranes of reptiles are providing insight into three major historical transformations: evolution of the amniote egg, evolution of viviparity, and evolution of placentotrophy. Squamates (lizards and snakes) are ideal for such studies because their fetal membranes sustain embryos in oviparous species and contribute to placentas in viviparous species. Ultrastructure of the fetal membranes in oviparous corn snakes (Pituophis guttatus) shows that the chorioallantois is specialized for gas exchange and the omphalopleure, for water absorption. Transmission and scanning electron microscopic studies of viviparous thamnophine snakes (Thamnophis, Storeria) have revealed morphological specializations for gas exchange and absorption in the intra-uterine environment that represent modifications of features found in oviparous species. Thus, fetal membranes in oviparous species show morphological differentiation for distinct functions that have been recruited and enhanced under viviparous conditions. The ultimate in specialization of fetal membranes is found in viviparous skinks of South America (Mabuya) and Africa (Trachylepis, Eumecia), in which placentotrophy accounts for nearly all of the nutrients for development. Ongoing research on these lizards has revealed morphological specializations of the chorioallantoic placenta through which nutrient transfer is accomplished. In addition, African Trachylepis show an invasive form of implantation, in which uterine epithelium is replaced by invading chorionic cells. Ongoing analysis of these lizards shows how integration of multiple lines of evidence can provide insight into the evolution of developmental and reproductive specializations once thought to be confined to eutherian mammals.

  10. When can stress facilitate divergence by altering time to flowering?

    Science.gov (United States)

    Jordan, Crispin Y; Ally, Dilara; Hodgins, Kathryn A

    2015-12-01

    Stressors and heterogeneity are ubiquitous features of natural environments, and theory suggests that when environmental qualities alter flowering schedules through phenotypic plasticity, assortative mating can result that promotes evolutionary divergence. Therefore, it is important to determine whether common ecological stressors induce similar changes in flowering time. We review previous studies to determine whether two important stressors, water restriction and herbivory, induce consistent flowering time responses among species; for example, how often do water restriction and herbivory both delay flowering? We focus on the direction of change in flowering time, which affects the potential for divergence in heterogeneous environments. We also tested whether these stressors influenced time to flowering and nonphenology traits using Mimulus guttatus. The literature review suggests that water restriction has variable effects on flowering time, whereas herbivory delays flowering with exceptional consistency. In the Mimulus experiment, low water and herbivory advanced and delayed flowering, respectively. Overall, our results temper theoretical predictions for evolutionary divergence due to habitat-induced changes in flowering time; in particular, we discuss how accounting for variation in the direction of change in flowering time can either increase or decrease the potential for divergence. In addition, we caution against adaptive interpretations of stress-induced phenology shifts.

  11. Paralogous SQUAMOSA PROMOTER BINDING PROTEIN-LIKE (SPL) genes differentially regulate leaf initiation and reproductive phase change in petunia.

    Science.gov (United States)

    Preston, Jill C; Jorgensen, Stacy A; Orozco, Rebecca; Hileman, Lena C

    2016-02-01

    Duplicated petunia clade-VI SPL genes differentially promote the timing of inflorescence and flower development, and leaf initiation rate. The timing of plant reproduction relative to favorable environmental conditions is a critical component of plant fitness, and is often associated with variation in plant architecture and habit. Recent studies have shown that overexpression of the microRNA miR156 in distantly related annual species results in plants with perennial characteristics, including late flowering, weak apical dominance, and abundant leaf production. These phenotypes are largely mediated through the negative regulation of a subset of genes belonging to the SQUAMOSA PROMOTER BINDING PROTEIN-LIKE (SPL) family of transcription factors. In order to determine how and to what extent paralogous SPL genes have partitioned their roles in plant growth and development, we functionally characterized petunia clade-VI SPL genes under different environmental conditions. Our results demonstrate that PhSBP1and PhSBP2 differentially promote discrete stages of the reproductive transition, and that PhSBP1, and possibly PhCNR, accelerates leaf initiation rate. In contrast to the closest homologs in annual Arabidopsis thaliana and Mimulus guttatus, PhSBP1 and PhSBP2 transcription is not mediated by the gibberellic acid pathway, but is positively correlated with photoperiod and developmental age. The developmental functions of clade-VI SPL genes have, thus, evolved following both gene duplication and speciation within the core eudicots, likely through differential regulation and incomplete sub-functionalization.

  12. Interacciones tróficas de las seis especies de peces más abundantes en la pesquería artesanal en dos bahías del Pacífico Central Mexicano

    Directory of Open Access Journals (Sweden)

    J.R Flores Ortega

    2010-03-01

    Full Text Available Se analizaron los componentes tróficos de las seis especies de peces más importantes en la captura de la pesquería artesanal en las Bahía de Navidad y Chamela, ubicadas en la costa de Jalisco, México. Las especies estudiadas fueron Microlepidotus brevipinnis, Caranx caballus, Haemulon flaviguttatum, Lutjanus guttatus, Lutjanus argentiventris y Mulloidichthys dentatus. Se consideraron dos periodos de estudio de acuerdo a las pautas hidroclimáticas y los patrones de producción biológica en la zona: periodo de influencia de la Contracorriente Norecuatorial (T1, y periodo de influencia de la Corriente de California (T2. En Bahía de Navidad se identificaron 78 presas en total para las seis especies. En el periodo comprendido entre julio y diciembre (T1 se identificaron 64 presas y 45 de enero a junio (T2. En Bahía de Chamela se identificaron 93 presas, encontrando 74 presas en el periodo T1 y 60 presas para el periodo T2. El mayor número de presas se encontró en M. dentatus con 34 presas en el periodo T1 de Bahía de Chamela y el menor número fue en H. flaviguttatum en T1 de Bahía de Navidad con solo 7 presas. Los crustáceos fueron las presas de mayor presencia en la dieta, seguidos por peces, moluscos, poliquetos y equinodermos, en ambos periodos y sitios de muestreo. Las seis especies analizadas se consideran como especialistas, dados los bajos valores del índice de amplitud de nicho en ambos periodos y sitios de muestreo.Trophic interactions of the six most abundant fish species in the artisanal fishery in two bays, central Mexican Pacific. We surveyed the trophic components in six species of Bahía de Navidad and Bahía de Chamela: Microlepidotus brevipinnis, Caranx caballus, Haemulon flaviguttatum, Lutjanus guttatus, L. argentiventris and Mulloidichthys dentatus. Two main seasonal periods were considered: 1 North Equatorial Counter Current NECC period influence (T1 and 2 California Current CC period influence (T2. In Bahía de

  13. FLUKTUASI DAN KOMPOSISI HASIL TANGKAPAN TUNA NERITIK TERTANGKAP JARING INSANG DI PERAIRAN LAUT CINA SELATAN

    Directory of Open Access Journals (Sweden)

    Arief Wujdi

    2016-03-01

    Full Text Available Saat ini tuna neritik merupakan komoditas penting perikanan di Indonesia, namun ketersediaan data dan informasi hasil tangkapan jenis tuna ini masih tergolong kurang. Penelitian ini bertujuan untuk memperoleh informasi mengenai sebaran daerah penangkapan, fluktuasi hasil tangkapan tuna neritik yang tertangkap jaring insang yang beroperasi di Laut Cina Selatan. Pengumpulan data dilakukan melalui program enumerasi monitoring hasil tangkapan harian di Pemangkat pada tahun 2011-2012. Hasil menunjukkan daerah penangkapan tersebar di perairan Laut Cina Selatan pada koordinat 01°03’ LS-04°57’ LU; dan 104°65’-110°00’ BT. Hasil tangkapan jenis tuna neritik menunjukan variasi yang cenderung sama dimana puncak hasil tangkapan terjadi pada bulan Oktober dan November. Pola CPUE berfluktuasi dan cenderung mengalami peningkatan dan puncaknya terjadi pada bulan November 2011 dan 2012, yaitu 402,85 dan 444,57 kg/hari/trip. Secara statistik hasil tangkapan pada periode 2011-2012 tidak berbeda nyata (p<0,05. Komposisi hasil tangkapan bulanan jenis tuna neritik bervariasi berdasarkan atas spesies yang didominasi oleh Euthynnus affinis (49,7% diikuti dengan Thunnus tonggol (33,4%; Scomberomorus commerson (15,9%; dan Scomberomorus guttatus (1%. Kelimpahan Euthynnus affinis terjadi pada musim timur hingga musim peralihan 2 (Juni- November, sedangkan kelimpahan Thunnus tonggol terjadi pada musim barat (Januari-Februari. Nowadays, neritic tuna just become an important commodity Indonesia. However, the information about catch of tuna neritic species in Indonesia still quite lacks. This This study aims to obtain information about catch fluctuation, monthly catch per unit of effort, and catch composition of neritic tuna species caught by gill net operated in the South China Sea. Data was collected by daily catch monitoring program by enumerator in Pemangkat during period 2011-2012. The result showed that gillnetter fishing ground is scattered between 01°03

  14. The king of snakes: performance and morphology of intraguild predators (Lampropeltis) and their prey (Pantherophis).

    Science.gov (United States)

    Penning, David A; Moon, Brad R

    2017-03-15

    Across ecosystems and trophic levels, predators are usually larger than their prey, and when trophic morphology converges, predators typically avoid predation on intraguild competitors unless the prey is notably smaller in size. However, a currently unexplained exception occurs in kingsnakes in the genus Lampropeltis Kingsnakes are able to capture, constrict and consume other snakes that are not only larger than themselves but that are also powerful constrictors (such as ratsnakes in the genus Pantherophis ). Their mechanisms of success as intraguild predators on other constrictors remain unknown. To begin addressing these mechanisms, we studied the scaling of muscle cross-sectional area, pulling force and constriction pressure across the ontogeny of six species of snakes ( Lampropeltis californiae , L. getula , L. holbrooki , Pantherophis alleghaniensis , P. guttatus and P. obsoletus ). Muscle cross-sectional area is an indicator of potential force production, pulling force is an indicator of escape performance, and constriction pressure is a measure of prey-handling performance. Muscle cross-sectional area scaled similarly for all snakes, and there was no significant difference in maximum pulling force among species. However, kingsnakes exerted significantly higher pressures on their prey than ratsnakes. The similar escape performance among species indicates that kingsnakes win in predatory encounters because of their superior constriction performance, not because ratsnakes have inferior escape performance. The superior constriction performance by kingsnakes results from their consistent and distinctive coil posture and perhaps from additional aspects of muscle structure and function that need to be tested in future research. © 2017. Published by The Company of Biologists Ltd.

  15. Development of the hearts of lizards and snakes and perspectives to cardiac evolution.

    Directory of Open Access Journals (Sweden)

    Bjarke Jensen

    Full Text Available Birds and mammals both developed high performance hearts from a heart that must have been reptile-like and the hearts of extant reptiles have an unmatched variability in design. Yet, studies on cardiac development in reptiles are largely old and further studies are much needed as reptiles are starting to become used in molecular studies. We studied the growth of cardiac compartments and changes in morphology principally in the model organism corn snake (Pantherophis guttatus, but also in the genotyped anole (Anolis carolinenis and A. sagrei and the Philippine sailfin lizard (Hydrosaurus pustulatus. Structures and chambers of the formed heart were traced back in development and annotated in interactive 3D pdfs. In the corn snake, we found that the ventricle and atria grow exponentially, whereas the myocardial volumes of the atrioventricular canal and the muscular outflow tract are stable. Ventricular development occurs, as in other amniotes, by an early growth at the outer curvature and later, and in parallel, by incorporation of the muscular outflow tract. With the exception of the late completion of the atrial septum, the adult design of the squamate heart is essentially reached halfway through development. This design strongly resembles the developing hearts of human, mouse and chicken around the time of initial ventricular septation. Subsequent to this stage, and in contrast to the squamates, hearts of endothermic vertebrates completely septate their ventricles, develop an insulating atrioventricular plane, shift and expand their atrioventricular canal toward the right and incorporate the systemic and pulmonary venous myocardium into the atria.

  16. Impacts of moonlight on fish reproduction.

    Science.gov (United States)

    Ikegami, Taro; Takeuchi, Yuki; Hur, Sung-Pyo; Takemura, Akihiro

    2014-04-01

    The waxing and waning cycle of the moon is repeated at approximately 1-month intervals, and concomitant changes occur in the levels of moonlight and cueing signals detected by organisms on the earth. In the goldlined spinefoot Siganus guttatus, a spawner lunar-synchronized around the first quarter moon, periodic changes in moonlight are used to cue gonadal development and gamete release. Rearing of mature fish under artificial constant full moon and new moon conditions during the spawning season leads to disruption or delay of synchronous spawning around the predicted moon phase. Melatonin, an endogenous transducer of the environmental light/dark cycle, increases in the blood and in the pineal gland around the new moon period and decreases around the full moon period. In synchrony with melatonin fluctuation, melatonin receptor(s) mRNA abundance is higher during the new moon period than during the full moon. The melatonin/melatonin receptor system is likely affected by moonlight. Measurements of the expression patterns of clock genes in neural tissues demonstrate that Cryptochrome (Cry1 and Cry3) and Period (Per2) fluctuate with lunar periodicity, the former peaking in the medial part of the brain around the first quarter moon period, and the latter peaking in the pineal gland around the full moon. Some clock genes may respond to periodic changes in moon phase and appear to be involved in the generation of lunar-related rhythmicity in lunar spawners. Thus, some fish use moonlight-related periodicities as reliable information for synchronizing the timing of reproductive events. Copyright © 2013 Elsevier B.V. All rights reserved.

  17. A Novel Pattern of Yolk Processing in Developing Snake Eggs (Colubridae: Lampropeltini) and its Functional and Evolutionary Implications.

    Science.gov (United States)

    Powers, Kathryn G; Blackburn, Daniel G

    2017-07-01

    Early amniotic vertebrates evolved large-yolked eggs that permitted production of well-developed, terrestrial hatchlings. This reproductive pattern required new mechanisms for cellularizing the yolk and mobilizing it for embryonic use. In birds, cells that line the yolk sac cavity phagocytose and digest the yolk material, a pattern that is commonly assumed to be universal among oviparous amniotes. However, recent evidence challenges the assumption that all squamate reptiles conform to the avian developmental pattern. In this paper, scanning electron microscopy and histology were used to study mechanisms of yolk processing in two colubrid snakes, the kingsnake Lampropeltis getula and the milksnake L. triangulum. Endodermal cells from the yolk sac splanchnopleure proliferate massively as they invade the yolk sac cavity, forming elaborate chains of interlinked cells. These cells grow in size as they phagocytose yolk material. Subsequently, vitelline capillaries invade the masses of yolk-laden cells and become coated with the endodermal cells, forming an elaborate meshwork of cell-coated strands. The close association of cells, yolk, and blood vessels allows yolk material to be cellularized, digested, and transported for embryonic use. The overall pattern is like that of the corn snake Pantherophis guttatus, but contrasts markedly with that of birds. Given recent evidence that this developmental pattern may also occur in certain lizards, we postulate that it is ancestral for squamates. Studies of lizards, crocodilians, and turtles are needed to clarify the evolutionary history of this pattern and its implications for the evolution of the amniotic (terrestrial) vertebrate egg. © 2017 Wiley Periodicals, Inc.

  18. Spatio-temporal segregation of calling behavior at a multispecies fish spawning site in Little Cayman

    Science.gov (United States)

    Cameron, K. C.; Sirovic, A.; Jaffe, J. S.; Semmens, B.; Pattengill-Semmens, C.; Gibb, J.

    2016-02-01

    Fish spawning aggregation (FSA) sites are extremely vulnerable to over-exploitation. Accurate understanding of the spatial and temporal use of such sites is necessary for effective species management. The size of FSAs can be on the order of kilometers and peak spawning often occurs at night, posing challenges to visual observation. Passive acoustics are an alternative method for dealing with these challenges. An array of passive acoustic recorders and GoPro cameras were deployed during Nassau grouper (Epinephelus striatus) spawning from February 7th to 12th, 2015 at a multispecies spawning aggregation site in Little Cayman, Cayman Islands. In addition to Nassau grouper, at least 10 other species are known to spawn at this location including tiger grouper (Mycteroperca tigris), red hind (Epinephelus guttatus), black grouper (Mycteroperca bonaci), and yellowfin grouper (Mycteroperca venenosa). During 5 days of continuous recordings, over 21,000 fish calls were detected. These calls were classified into 15 common types. Species identification and behavioral context of unknown common call types were determined by coupling video recordings collected during this time with call localizations. There are distinct temporal patterns in call production of different species. For example, red hind and yellowfin grouper call predominately at night with yellowfin call rates increasing after midnight, and black grouper call primarily during dusk and dawn. In addition, localization methods were used to reveal how the FSA area was divided among species. These findings facilitate a better understanding of the behavior of these important reef fish species allowing policymakers to more effectively manage and protect them.

  19. Experimental infection of snakes with Ophidiomyces ophiodiicola causes pathological changes that typify snake fungal disease

    Science.gov (United States)

    Lorch, Jeffrey M.; Lankton, Julia S.; Werner, Katrien; Falendysz, Elizabeth A.; McCurley, Kevin; Blehert, David S.

    2015-01-01

    Snake fungal disease (SFD) is an emerging skin infection of wild snakes in eastern North America. The fungus Ophidiomyces ophiodiicola is frequently associated with the skin lesions that are characteristic of SFD, but a causal relationship between the fungus and the disease has not been established. We experimentally infected captive-bred corn snakes (Pantherophis guttatus) in the laboratory with pure cultures of O. ophiodiicola. All snakes in the infected group (n = 8) developed gross and microscopic lesions identical to those observed in wild snakes with SFD; snakes in the control group (n = 7) did not develop skin infections. Furthermore, the same strain of O. ophiodiicola used to inoculate snakes was recovered from lesions of all animals in the infected group, but no fungi were isolated from individuals in the control group. Monitoring progression of lesions throughout the experiment captured a range of presentations of SFD that have been described in wild snakes. The host response to the infection included marked recruitment of granulocytes to sites of fungal invasion, increased frequency of molting, and abnormal behaviors, such as anorexia and resting in conspicuous areas of enclosures. While these responses may help snakes to fight infection, they could also impact host fitness and may contribute to mortality in wild snakes with chronic O. ophiodiicola infection. This work provides a basis for understanding the pathogenicity of O. ophiodiicola and the ecology of SFD by using a model system that incorporates a host species that is easy to procure and maintain in the laboratory.

  20. Isolation and Characterization of Lactic Acid Bacteria from Inasua

    Directory of Open Access Journals (Sweden)

    Ferymon Mahulette

    2017-04-01

    Full Text Available Inasua is a traditionally product of wet salt fish fermentation produced by Teon, Nila and Serua (TNS Communities in Central Maluku, Indonesia. The community made this fermented fish to anticipate the lean time when fisherman could not go to sea.  The  fish that used as inasua raw material is demersal fishes that live around coral reefs, such as Samandar fish (Siganatus guttatus, Gala-gala fish (Lutjanus sp. and Sikuda fish (Lethrinus ornatus. The objective of the research was to isolate and characterize of bacterial indigenous in  Inasua from three producers in Seram Island. The measurement of pH from inasua samples were 5.9, 5.0 and 5.8, respectively. The highest number of lactic acid bacteria was found from  Gala – gala inasua was 2,5x107 cfu/g sample. Isolation of all isolates bacteria from inasua showed that a total of 7 isolates of bacteria was obtained  from Samadar inasua, 9 isolates from  Gala-gala inasua, and 7 isolates from  Sikuda inasua.  From a total of 23 isolates, only 6 isolates had characteristic as lactic acid bacteria that were Gram  positive, negative catalase, and cocci shape. The microscopic characteristics  of the isolates are coccid in pairs or uniforms which combine to form tetrads. Carbohydrate utilization test  of selected isolate by using API 50 CHB kit indicated that 13 carbohydrates are fermented by these isolates  after incubation for 48 hours. The research  was concluded that the dominant bacteria in inasua sample  is  cocci-lactic acid bacteria. Keywords : fermented fish, inasua, lactic acid bacteria, MRSA medium

  1. Parvalbumin--the major tropical fish allergen.

    Science.gov (United States)

    Lim, Dawn Li-Chern; Neo, Keng Hwee; Yi, Fong Cheng; Chua, Kaw Yan; Goh, Denise Li-Meng; Shek, Lynette Pei-Chi; Giam, Yoke Chin; Van Bever, Hugo P S; Lee, Bee Wah

    2008-08-01

    Fish allergy is common in countries where consumption is high. Asian nations are amongst the world's largest consumers of fish but the allergen profiles of tropical fish are unknown. This study sought to evaluate the allergenicity of four commonly consumed tropical fish, the threadfin (Polynemus indicus), Indian anchovy (Stolephorus indicus), pomfret (Pampus chinensis) and tengirri (Scomberomorus guttatus). Immunoglobulin E (IgE) cross-reactivity with parvalbumin of cod fish (Gad c 1), the major fish allergen, was also studied. Detection of tropical fish and cod specific-IgE was performed by UniCap assay, and skin prick tests were also carried out. The IgE-binding components of tropical fish were identified using IgE immunoblot techniques, and cross-reactivity with Gad c 1 was assessed by ELISA inhibition and IgE immunoblot inhibition. Clinically, nine of 10 patients studied were allergic to multiple fish. All patients exhibited detectable specific-IgE to cod fish (10 of 10 skin prick test positive, eight of 10 UniCap assay positive) despite lack of previous exposure. The major allergen of the four tropical fish was the 12-kDa parvalbumin. IgE cross-reactivity of these allergens to Gad c 1 was observed to be moderate to high in the tropical fish studied. Parvalbumins are the major allergens in commonly consumed tropical fish. They are cross-reactive with each other as well as with Gad c 1. Commercial tests for cod fish appear to be sufficient for the detection of tropical fish specific-IgE.

  2. Phytoaccumulation of trace elements by wetland plants: 3. Uptake and accumulation of ten trace elements by twelve plant species

    Energy Technology Data Exchange (ETDEWEB)

    Qian, J.H.; Zayed, A.; Zhu, Y.L.; Yu, M.; Terry, N.

    1999-10-01

    Interest is increasing in using wetland plants in constructed wetlands to remove toxic elements from polluted wastewater. To identify those wetland plants that hyperaccumulate trace elements, 12 plant species were tested for their efficiency to bioconcentrate 10 potentially toxic trace elements including As, b, Cd, Cr, Cu, Pb, Mn, Hg, Ni, and Se. Individual plants were grown under carefully controlled conditions and supplied with 1 mg L{sup {minus}1} of each trace element individually for 10 d. Except B, all elements accumulated to much higher concentrations in roots than in shoots. Highest shoot tissue concentrations (mg kg{sup {minus}1} DW) of the various trace elements were attained by the following species: umbrella plant (Cyperus alternifolius L.) for Mn (198) and Cr (44); water zinnia (Wedelia trilobata Hitchc.) for Cd (148) and Ni (80); smartweed (Polygonum hydropiperoides Michx.) for Cu (95) and Pb (64); water lettuce (Pistia stratiotes L.) for Hg (92), As (34), and Se (39); and mare's tail (hippuris vulgaris L.) for B (1132). Whereas, the following species attained the highest root tissue concentrations (mg kg{sup {minus}1} DW); stripped rush (Baumia rubiginosa) for Mn (1683); parrot's feather (Myriophyllum brasiliense Camb.) for Cd (1426) and Ni (1077); water lettuce for Cu (1038), Hg (1217), and As (177); smartweed for Cr (2980) and Pb (1882); mare's tail for B (1277); and monkey flower (Mimulus guttatus Fisch.) for Se (384). From a phytoremediation perspective, smartweed was probably the best plant species for trace element removal from wastewater due to its faster growth and higher plant density.

  3. Four additional hepatozoon species (Apicomplexa: Hepatozoidae) from north Florida ratsnakes, genus Pantherophis.

    Science.gov (United States)

    Telford, Sam R; Moler, Paul E; Butler, Jerry F

    2012-09-01

    Records from a colubrid host are reported for Hepatozoon horridus, described originally from a viperid snake. Hepatozoon horridus in Pantherophis guttatus (Colubridae) has gamonts 14-18.0 by 4.0-5.5 microm, with length by width (LW) 60-99 microm2, and L/W ratio 2.5-3.9. Spherical to elongate, usually ovoid oocysts with L/W ratio 1.0-3.7 contain 16-160 spherical to usually ovoid sporocysts 15-31 by 14-26 microm, with L/W ratio 1.0-1.4, that contain 5-24 sporozoites. Two additional Hepatozoon species are described from ratsnakes in north Florida. Hepatozoon quadrivittata n. sp. from Pantherophis obsoletus quadrivittatus has gamonts 12-17 by 4-6 microm, LW 56-102 microm2, and L/W ratio 2.6-3.8. Nearly spherical oocysts with L/W 1.0-1.1 contain 5-227 spherical to slightly ovoid sporocysts 20-48 by 19-45 microm, with L/W ratio 1.0-1.4, that contain 13-48 sporozoites. Hepatozoon spiloides n. sp. from Pantherophis obsoletus spiloides forms gamonts 12-15 by 4-5 microm with LW 48-75 microm2 and L/W ratio 2.6-3.5. Occasionally rounded but usually elongate oocysts, with L/W ratio 1.0-2.7, contain 5-21 spherical to elongate sporocysts 28-43 by 18-35 microm, L/W ratio 2.5-3.9. In the distinctive Hepatozoon sp. present in Pantherophis obsoletus spiloides, gamonts are 13-17 by 5-10 microm, with LW 75-140 microm2 and L/W ratio 1.4-3.0. Infected erythrocytes are always distorted and enlarged on average 2.5 times the size of uninfected cells, with nuclei enlarged by one-third and broadly elongated. Gamonts often stained deep blue, and cytoplasm of erythrocytes infected with mature gamonts was always dehemoglobinized. Sporogony could not be obtained in three feedings by hundreds of Aedes aegypti, which usually died within the first 24-48 hr.

  4. Experimental Infection of Snakes with Ophidiomyces ophiodiicola Causes Pathological Changes That Typify Snake Fungal Disease.

    Science.gov (United States)

    Lorch, Jeffrey M; Lankton, Julia; Werner, Katrien; Falendysz, Elizabeth A; McCurley, Kevin; Blehert, David S

    2015-11-17

    Snake fungal disease (SFD) is an emerging skin infection of wild snakes in eastern North America. The fungus Ophidiomyces ophiodiicola is frequently associated with the skin lesions that are characteristic of SFD, but a causal relationship between the fungus and the disease has not been established. We experimentally infected captive-bred corn snakes (Pantherophis guttatus) in the laboratory with pure cultures of O. ophiodiicola. All snakes in the infected group (n = 8) developed gross and microscopic lesions identical to those observed in wild snakes with SFD; snakes in the control group (n = 7) did not develop skin infections. Furthermore, the same strain of O. ophiodiicola used to inoculate snakes was recovered from lesions of all animals in the infected group, but no fungi were isolated from individuals in the control group. Monitoring progression of lesions throughout the experiment captured a range of presentations of SFD that have been described in wild snakes. The host response to the infection included marked recruitment of granulocytes to sites of fungal invasion, increased frequency of molting, and abnormal behaviors, such as anorexia and resting in conspicuous areas of enclosures. While these responses may help snakes to fight infection, they could also impact host fitness and may contribute to mortality in wild snakes with chronic O. ophiodiicola infection. This work provides a basis for understanding the pathogenicity of O. ophiodiicola and the ecology of SFD by using a model system that incorporates a host species that is easy to procure and maintain in the laboratory. Skin infections in snakes, referred to as snake fungal disease (SFD), have been reported with increasing frequency in wild snakes in the eastern United States. While most of these infections are associated with the fungus Ophidiomyces ophiodiicola, there has been no conclusive evidence to implicate this fungus as a primary pathogen. Furthermore, it is not understood why the

  5. Gönen Çayı (Balıkesir, Çanakkale-Türkiye'nda yaşayan sucul Coleoptera ve sucul ve yarısucul Heteroptera faunası üzerine bir çalışma.

    Directory of Open Access Journals (Sweden)

    Esat Tarık Topkara

    2015-12-01

    Full Text Available Gönen Çayı’nın sucul Coleoptera ve sucul-yarısucul Heteroptera faunasını belirlemek amacıyla gerçekleştirilen bu çalışmada, Gönen çayı ve kollarına 2010-2012 yılları arasında 8 arazi çalışması düzenlenmiştir. Bu arazi çalışmalarında 15 istasyonda örnekleme çalışması yürütülmüştür. Sucul böcek örnekleri 500 µm göz açıklığındaki el kepçesi ile toplanmıştır. Laboratuvarda yapılan incelemeler sonucunda Coleoptera ordosuna ait Gyrinidae familyasından 3 takson, Noteridae familyasından 1 tür, Dytiscidae familyasından 11 tür 1 alttür, Hydrophilidae familyasından 13 tür 1 alttür, Spercheidae familyasından 1 tür, Hydraenidae familyasından 4 tür tespit edilmiştir. Heteroptera ordosuna ait Gerridae familyasından 1 tür, Corixidae familyasından 3 tür 3 alttür, Notonectidae familyasından 2 tür tespit edilmiştir. Bu taksonlardan Gyrinus caspius, Gyrinus distinctus, Gyrinus substriatus, Agabus bipustulatus, Agabus guttatus, Hydaticus leander, Hydroporus pubescens, Laccophilus hyalinus, Laccophilus poecilus, Platambus lunulatus, Ranthus suturalis, Scarodytes halensis halensis, Boreonectes griseostriatus, Anacaena rufipes, Berosus byzantinus, Helochares lividus, Notonecta viridis, Notonecta maculata, Sigara striata, Sigara nigrolineata nigrolineata, Sigara lateralis Gönen Çayı’nın Balıkesir ili sınırları içerisindeki istasyonlardan; Laccophilus minutus, Spercheus emarginatus, Sigara limitata limitata Gönen Çayı’nın Çanakkale ili sınırları içerisindeki istasyonlardan; Enochrus bicolor, Micronecta scholtzi, Micronecta anatolica anatolica, Gerris thorasicus Çanakkale ve Balıkesir il sınırları içerisindeki istasyonlarından ilk kez tespit edilmiştir

  6. Formation and toxicological effect of secondary organic aerosols%二次有机气溶胶的形成及其毒理效应

    Institute of Scientific and Technical Information of China (English)

    曹军骥; 李建军

    2016-01-01

    photo-oxidation or nitration reaction with gas oxidants in the air to form oxygenated-PAHs (OPAHs) or nitrated-PAHs (NPAHs), and thus the toxicity and health hazard are enhanced. Parent PAHs and their derivatives can absorb light energy to reach the photo-excited states, and then react with molecular oxygen, medium, and coexisting chemicals to produce reactive oxygen species (ROS) and other reactive intermediates, which can induce lipid peroxidation and DNA damage. (2) Amine: Organic amines are derivatives of ammonia in which one or more of the hydrogen atoms replaced by an alkyl or aryl group. They are strong alkaline compounds and play a very important role on secondary aerosols formation. The gaseous aliphatic amines can undergo rapid acid-base reactions to form salt particles in the presence of atmospheric acids (such as HCl, HNO3, H2SO4). Other multiphase reactions of amines include carbonyl-amine interaction and particle-phase oxidation reactions. Particulate alkyl amine can also react with nitrite to form carcinogenic nitrosamine. All these secondary products have signiifcantly adverse effects on human health, such as skin allergy, respiratory diseases, and cancers etc., and thus would alter the biological effect of aerosols in the atmosphere in return. (3) Terpenes: Terpenes is one of the most important biogenic volatile organic compounds (BVOCs) in the atmosphere. In indoor environment, terpenes can be easily emitted from many consumer products such as furnitures or clothes. On the other hand, some gaseous oxidants like ozone and NOx can also present in the indoor air because of the inifltration from outdoor environment or emission by some ofifce and consumer equipment. Thus, the indoor health effect of secondary organic aerosol formation of terpenes with other gaseous oxidants is a popular issue in recent researches. Some of the gaseous products formed are irritating to biological tissues, while the condensed-phase products have received attention due to their