Understanding the controls on sediment-P interactions and dynamics along a non-tidal river system in a rural–urban catchment: The River Nene

International Nuclear Information System (INIS)

Tye, A.M.; Rawlins, B.G.; Rushton, J.C.; Price, R.

2016-01-01

The release of Phosphorus (P) from river sediments has been identified as a contributing factor to waters failing the criteria for ‘Good Ecological Status’ under the EU Water Framework Directive (WFD). To identify the contribution of sediment-P to river systems, an understanding of the factors that influence its distribution within the entire non-tidal system is required. Thus the aims of this work were to examine the (i) total (P_T_o_t_a_l) and labile (P_L_a_b_i_l_e) concentrations in sediment, (ii) the sequestration processes and (iii) the interactions between sediment P and the river water in the six non-tidal water bodies of the River Nene, U.K. Collection of sediments followed a long period of flooding and high stream flow. In each water body, five cores were extracted and homogenised for analysis with an additional core being taken and sampled by depth increments. Comparing the distribution of sediment particle size and P_T_o_t_a_l data with soil catchment geochemical survey data, large increases in P_T_o_t_a_l were identified in sediments from water body 4–6, where median concentrations of P_T_o_t_a_l in the sediment (3603 mg kg"−"1) were up to double those of the catchment soils. A large proportion of this increase may be related to in-stream sorption of P, particularly from sewage treatment facilities where the catchment becomes more urbanised after water body 3. A linear correlation (r = 0.8) between soluble reactive phosphate (SRP) and Boron in the sampled river waters was found suggesting increased STW input in water bodies 4–6. P_L_a_b_i_l_e concentrations in homogenised cores were up to 100 mg kg"−"1 PO_4–P (generally < 2% of P_T_o_t_a_l) and showed a general increase with distance from the headwaters. A general increase in Equilibrium Phosphate Concentrations (EPC_0) from an average of 0.9–∼1.7 μm L"−"1 was found between water bodies 1–3 and 4–6. Fixation within oxalate extractable phases (Al, Fe and Mn) accounted

Diatom-driven recolonization of microbial mat-dominated siliciclastic tidal flat sediments.

Science.gov (United States)

Pan, Jerónimo; Cuadrado, Diana G; Bournod, Constanza N

2017-10-01

Modern microbial mats and biofilms play a paramount role in sediment biostabilization. When sporadic storms affect tidal flats of Bahía Blanca Estuary, the underlying siliciclastic sediment is exposed by physical disruption of the mat, and in a few weeks' lapse, a microbial community re-establishes. With the objective of studying colonization patterns and the ecological succession of microorganisms at the scale of these erosional structures, these were experimentally made and their biological recolonization followed for 8 weeks, with replication in winter and spring. Motile pennate diatoms led the initial colonization following two distinct patterns: a dominance by Cylindrotheca closterium in winter and by naviculoid and nitzschioid diatoms in spring. During the first 7 days, cell numbers increased 2- to 17-fold. Cell densities further increased exhibiting sigmoidal community growth, reaching 2.9-8.9 × 106 cells cm-3 maxima around day 30; centric diatoms maintained low densities throughout. In 56 days after removal of the original mat, filamentous cyanobacteria that dominate mature mats did not establish a significant biomass, leading to the rejection of the hypothesis that cyanobacteria would drive the colonization. The observed dominance of pennate diatoms is attributed to extrinsic factors determined by tidal flooding, and intrinsic ones, e.g. motility, nutrient affinity and high growth rate. © FEMS 2017. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Inferring tidal wetland stability from channel sediment fluxes: Observations and a conceptual model

Science.gov (United States)

Ganju, Neil K.; Nidzieko, Nicholas J.; Kirwan, Matthew L.

2013-12-01

and climatic forces have modified the geomorphology of tidal wetlands over a range of timescales. Changes in land use, sediment supply, river flow, storminess, and sea level alter the layout of tidal channels, intertidal flats, and marsh plains; these elements define wetland complexes. Diagnostically, measurements of net sediment fluxes through tidal channels are high-temporal resolution, spatially integrated quantities that indicate (1) whether a complex is stable over seasonal timescales and (2) what mechanisms are leading to that state. We estimated sediment fluxes through tidal channels draining wetland complexes on the Blackwater and Transquaking Rivers, Maryland, USA. While the Blackwater complex has experienced decades of degradation and been largely converted to open water, the Transquaking complex has persisted as an expansive, vegetated marsh. The measured net export at the Blackwater complex (1.0 kg/s or 0.56 kg/m2/yr over the landward marsh area) was caused by northwesterly winds, which exported water and sediment on the subtidal timescale; tidally forced net fluxes were weak and precluded landward transport of suspended sediment from potential seaward sources. Though wind forcing also exported sediment at the Transquaking complex, strong tidal forcing and proximity to a turbidity maximum led to an import of sediment (0.031 kg/s or 0.70 kg/m2/yr). This resulted in a spatially averaged accretion of 3.9 mm/yr, equaling the regional relative sea level rise. Our results suggest that in areas where seaward sediment supply is dominant, seaward wetlands may be more capable of withstanding sea level rise over the short term than landward wetlands. We propose a conceptual model to determine a complex's tendency toward stability or instability based on sediment source, wetland channel location, and transport mechanisms. Wetlands with a reliable portfolio of sources and transport mechanisms appear better suited to offset natural and anthropogenic loss.

Seasonal variations in suspended-sediment dynamics in the tidal reach of an estuarine tributary

Science.gov (United States)

Downing-Kunz, Maureen A.; Schoellhamer, David H.

2013-01-01

Quantifying sediment supply from estuarine tributaries is an important component of developing a sediment budget, and common techniques for estimating supply are based on gages located above tidal influence. However, tidal interactions near tributary mouths can affect the magnitude and direction of sediment supply to the open waters of the estuary. We investigated suspended-sediment dynamics in the tidal reach of Corte Madera Creek, an estuarine tributary of San Francisco Bay, using moored acoustic and optical instruments. Flux of both water and suspended-sediment were calculated from observed water velocity and turbidity for two periods in each of wet and dry seasons during 2010. During wet periods, net suspended-sediment flux was seaward; tidally filtered flux was dominated by the advective component. In contrast, during dry periods, net flux was landward; tidally filtered flux was dominated by the dispersive component. The mechanisms generating this landward flux varied; during summer we attributed wind–wave resuspension in the estuary and subsequent transport on flood tides, whereas during autumn we attributed increased spring tide flood velocity magnitude leading to local resuspension. A quadrant analysis similar to that employed in turbulence studies was developed to summarize flux time series by quantifying the relative importance of sediment transport events. These events are categorized by the direction of velocity (flood vs. ebb) and the magnitude of concentration relative to tidally averaged conditions (relatively turbid vs. relatively clear). During wet periods, suspended-sediment flux was greatest in magnitude during relatively turbid ebbs, whereas during dry periods it was greatest in magnitude during relatively turbid floods. A conceptual model was developed to generalize seasonal differences in suspended-sediment dynamics; model application to this study demonstrated the importance of few, relatively large events on net suspended-sediment flux

Geometry of tidal inlet systems : A key factor for the net sediment transport in tidal inlets

NARCIS (Netherlands)

Ridderinkhof, W.; de Swart, H. E.; van der Vegt, M.; Alebregtse, N. C.; Hoekstra, P.

2014-01-01

The net transport of sediment between the back-barrier basin and the sea is an important process for determining the stability of tidal inlet systems. Earlier studies showed that in a short basin, tidal flats favor peak ebb-currents stronger than peak flood currents, implying export of coarse

Effect of environmental conditions on variation in the sediment-water interface created by complex macrofaunal burrows on a tidal flat

Science.gov (United States)

Koo, Bon Joo; Kwon, Kae Kyoung; Hyun, Jung-Ho

2007-11-01

We quantified the increase in the sediment-water interface created by the burrowing activities of the resident macrofaunal community and its variation with respect to the physical conditions of the habitat on a tidal fat. We investigated environmental factors and dimensions of macrofaunal burrows with respect to tidal height and vegetation during spring and summer at three sites. A resin-casting method was used to quantify the dimensions of all burrows at each site. The dimensions of macrofaunal burrows varied both temporally and spatially and the increase in the sediment-water interface reached a maximum of 311%, ranging from 20 to 255% under different habitat conditions. The sediment-water interface depended on the duration of exposure resulting from tidal height, increased temperatures resulting from seasonality, and marsh plant density. Burrows were deeper and more expansive at both higher tidal levels and higher temperatures in summer. Burrow dimensions were sharply reduced with the disappearance of adult macrofauna in areas where the roots of the marsh plant Suaeda japonica were dense. The significance of this study lies in quantifying the burrow dimensions of the entire macrofaunal community, rather than just a single population, and confirming their spatial and temporal variation with respect to physical conditions of the habitat. Environmental factors responsible for variation in burrow dimensions are discussed.

Flow paths of water and sediment in a tidal marsh: relations with marsh developmental stage and tidal inundation height

NARCIS (Netherlands)

Temmerman, S.; Bouma, T.J.; Govers, G.; Lauwaet, D.

2005-01-01

This study provides new insights in the relative role of tidal creeks and the marsh edge in supplying water and sediments to and from tidal marshes for a wide range of tidal inundation cycles with different high water levels and for marsh zones of different developmental stage. Net import or export

Inferring tidal wetland stability from channel sediment fluxes: observations and a conceptual model

Science.gov (United States)

Ganju, Neil K.; Nidzieko, Nicholas J.; Kirwan, Matthew L.

2013-01-01

Anthropogenic and climatic forces have modified the geomorphology of tidal wetlands over a range of timescales. Changes in land use, sediment supply, river flow, storminess, and sea level alter the layout of tidal channels, intertidal flats, and marsh plains; these elements define wetland complexes. Diagnostically, measurements of net sediment fluxes through tidal channels are high-temporal resolution, spatially integrated quantities that indicate (1) whether a complex is stable over seasonal timescales and (2) what mechanisms are leading to that state. We estimated sediment fluxes through tidal channels draining wetland complexes on the Blackwater and Transquaking Rivers, Maryland, USA. While the Blackwater complex has experienced decades of degradation and been largely converted to open water, the Transquaking complex has persisted as an expansive, vegetated marsh. The measured net export at the Blackwater complex (1.0 kg/s or 0.56 kg/m2/yr over the landward marsh area) was caused by northwesterly winds, which exported water and sediment on the subtidal timescale; tidally forced net fluxes were weak and precluded landward transport of suspended sediment from potential seaward sources. Though wind forcing also exported sediment at the Transquaking complex, strong tidal forcing and proximity to a turbidity maximum led to an import of sediment (0.031 kg/s or 0.70 kg/m2/yr). This resulted in a spatially averaged accretion of 3.9 mm/yr, equaling the regional relative sea level rise. Our results suggest that in areas where seaward sediment supply is dominant, seaward wetlands may be more capable of withstanding sea level rise over the short term than landward wetlands. We propose a conceptual model to determine a complex's tendency toward stability or instability based on sediment source, wetland channel location, and transport mechanisms. Wetlands with a reliable portfolio of sources and transport mechanisms appear better suited to offset natural and

Implications of tidally-varying bed stress and intermittent estuarine stratification on fine-sediment dynamics through the Mekong's tidal river to estuarine reach

Science.gov (United States)

McLachlan, R. L.; Ogston, A. S.; Allison, M. A.

2017-09-01

River gauging stations are often located upriver of tidal propagation where sediment transport processes and storage are impacted by widely varying ratios of marine to freshwater influence. These impacts are not yet thoroughly understood. Therefore, sediment fluxes measured at these stations may not be suitable for predicting changes to coastal morphology. To characterize sediment transport dynamics in this understudied zone, flow velocity, salinity, and suspended-sediment properties (concentration, size, and settling velocity) were measured within the tidal Sông Hậu distributary of the lower Mekong River, Vietnam. Fine-sediment aggregation, settling, and trapping rates were promoted by seasonal and tidal fluctuations in near-bed shear stress as well as the intermittent presence of a salt wedge and estuary turbidity maximum. Beginning in the tidal river, fine-grained particles were aggregated in freshwater. Then, in the interface zone between the tidal river and estuary, impeded near-bed shear stress and particle flux convergence promoted settling and trapping. Finally, in the estuary, sediment retention was further encouraged by stratification and estuarine circulation which protected the bed against particle resuspension and enhanced particle aggregation. These patterns promote mud export ( 1.7 t s-1) from the entire study area in the high-discharge season when fluvial processes dominate and mud import ( 0.25 t s-1) into the estuary and interface zone in the low-discharge season when estuarine processes dominate. Within the lower region of the distributaries, morphological change in the form of channel abandonment was found to be promoted within minor distributaries by feedbacks between channel depth, vertical mixing, and aggregate trapping. In effect, this field study sheds light on the sediment trapping capabilities of the tidal river - estuary interface zone, a relatively understudied region upstream of where traditional concepts place sites of deposition

Biodiversity and community composition of sediment macrofauna associated with deep-sea Lophelia pertusa habitats in the Gulf of Mexico

Science.gov (United States)

Demopoulos, Amanda W.J.; Bourque, Jill R.; Frometa, Janessy

2014-01-01

Scleractinian corals create three-dimensional reefs that provide sheltered refuges, facilitate sediment accumulation, and enhance colonization of encrusting fauna. While heterogeneous coral habitats can harbor high levels of biodiversity, their effect on the community composition within nearby sediments remains unclear, particularly in the deep sea. Sediment macrofauna from deep-sea coral habitats (Lophelia pertusa) and non-coral, background sediments were examined at three sites in the northern Gulf of Mexico (VK826, VK906, MC751, 350–500 m depth) to determine whether macrofaunal abundance, diversity, and community composition near corals differed from background soft-sediments. Macrofaunal densities ranged from 26 to 125 individuals 32 cm−2 and were significantly greater near coral versus background sediments only at VK826. Of the 86 benthic invertebrate taxa identified, 16 were exclusive to near-coral habitats, while 14 were found only in background sediments. Diversity (Fisher’s α) and evenness were significantly higher within near-coral sediments only at MC751 while taxon richness was similar among all habitats. Community composition was significantly different both between near-coral and background sediments and among the three primary sites. Polychaetes numerically dominated all samples, accounting for up to 70% of the total individuals near coral, whereas peracarid crustaceans were proportionally more abundant in background sediments (18%) than in those near coral (10%). The reef effect differed among sites, with community patterns potentially influenced by the size of reef habitat. Taxon turnover occurred with distance from the reef, suggesting that reef extent may represent an important factor in structuring sediment communities near L. pertusa. Polychaete communities in both habitats differed from other Gulf of Mexico (GOM) soft sediments based on data from previous studies, and we hypothesize that local environmental conditions found near L

Biodiversity and community composition of sediment macrofauna associated with deep-sea Lophelia pertusa habitats in the Gulf of Mexico

Science.gov (United States)

Demopoulos, Amanda W. J.; Bourque, Jill R.; Frometa, Janessy

2014-11-01

Scleractinian corals create three-dimensional reefs that provide sheltered refuges, facilitate sediment accumulation, and enhance colonization of encrusting fauna. While heterogeneous coral habitats can harbor high levels of biodiversity, their effect on the community composition within nearby sediments remains unclear, particularly in the deep sea. Sediment macrofauna from deep-sea coral habitats (Lophelia pertusa) and non-coral, background sediments were examined at three sites in the northern Gulf of Mexico (VK826, VK906, MC751, 350-500 m depth) to determine whether macrofaunal abundance, diversity, and community composition near corals differed from background soft-sediments. Macrofaunal densities ranged from 26 to 125 individuals 32 cm-2 and were significantly greater near coral versus background sediments only at VK826. Of the 86 benthic invertebrate taxa identified, 16 were exclusive to near-coral habitats, while 14 were found only in background sediments. Diversity (Fisher's α) and evenness were significantly higher within near-coral sediments only at MC751 while taxon richness was similar among all habitats. Community composition was significantly different both between near-coral and background sediments and among the three primary sites. Polychaetes numerically dominated all samples, accounting for up to 70% of the total individuals near coral, whereas peracarid crustaceans were proportionally more abundant in background sediments (18%) than in those near coral (10%). The reef effect differed among sites, with community patterns potentially influenced by the size of reef habitat. Taxon turnover occurred with distance from the reef, suggesting that reef extent may represent an important factor in structuring sediment communities near L. pertusa. Polychaete communities in both habitats differed from other Gulf of Mexico (GOM) soft sediments based on data from previous studies, and we hypothesize that local environmental conditions found near L. pertusa

Sediment transport and fluid mud layer formation in the macro-tidal Chikugo river estuary during a fortnightly tidal cycle

Science.gov (United States)

Azhikodan, Gubash; Yokoyama, Katsuhide

2018-03-01

The erosion and deposition dynamics of fine sediment in a highly turbid estuarine channel were successfully surveyed during the period from August 29 to September 12, 2009 using an echo sounder in combination with a high-resolution acoustic Doppler current profiler. Field measurements were conducted focusing on the tide driven dynamics of suspended sediment concentration (SSC), and fluid mud at the upstream of the macrotidal Chikugo river estuary during semidiurnal and fortnightly tidal cycles. Morphological evolution was observed especially during the spring tide over a period of two weeks. The elevation of the channel bed was stable during neap tide, but it underwent fluctuations when the spring tide occurred owing to the increase in the velocity and shear stress. Two days of time lag were observed between the maximum SSC and peak tidal flow, which resulted in the asymmetry between neap-to-spring and spring-to-neap transitions. During the spring tide, a hysteresis loop was observed between shear stress and SSC, and its direction was different during flood and ebb tides. Although both fine sediments and flocs were dominant during flood tides, only fine sediments were noticed during ebb tides. Hence, the net elevation change in the bed was positive, and sedimentation took place during the semilunar tidal cycle. Finally, a bed of consolidated mud was deposited on the initial bed, and the height of the channel bed increased by 0.9 m during the two-week period. The observed hysteretic effect between shear stress and SSC during the spring tides, and the asymmetrical neap-spring-neap tidal cycle influenced the near-bed sediment dynamics of the channel, and led to the formation of a fluid mud layer at the bottom of the river.

Tidal wetland fluxes of dissolved organic carbon and sediment at Browns Island, California: initial evaluation

Science.gov (United States)

Ganju, N.K.; Bergamaschi, B.; Schoellhamer, D.H.

2003-01-01

Carbon and sediment fluxes from tidal wetlands are of increasing concern in the Sacramento-San Joaquin River Delta (Delta), because of drinking water issues and habitat restoration efforts. Certain forms of dissolved organic carbon (DOC) react with disinfecting chemicals used to treat drinking water, to form disinfection byproducts (DBPs), some of which are potential carcinogens. The contribution of DBP precursors by tidal wetlands is unknown. Sediment transport to and from tidal wetlands determines the potential for marsh accretion, thereby affecting habitat formation.Water, carbon, and sediment flux were measured in the main channel of Browns Island, a tidal wetland located at the confluence of Suisun Bay and the Delta. In-situ instrumentation were deployed between May 3 and May 21, 2002. Water flux was measured using acoustic Doppler current profilers and the index-velocity method. DOC concentrations were measured using calibrated ultraviolet absorbance and fluorescence instruments. Suspended-sediment concentrations were measured using a calibrated nephelometric turbidity sensor. Tidally averaged water flux through the channel was dependent on water surface elevations in Suisun Bay. Strong westerly winds resulted in higher water surface elevations in the area east of Browns Island, causing seaward flow, while subsiding winds reversed this effect. Peak ebb flow transported 36% more water than peak flood flow, indicating an ebb-dominant system. DOC concentrations were affected strongly by porewater drainage from the banks of the channel. Peak DOC concentrations were observed during slack after ebb, when the most porewater drained into the channel. Suspended-sediment concentrations were controlled by tidal currents that mobilized sediment from the channel bed, and stronger tides mobilized more sediment than the weaker tides. Sediment was transported mainly to the island during the 2-week monitoring period, though short periods of export occurred during the spring

Effects of discharge, wind, and tide on sedimentation in a recently restored tidal freshwater wetland

NARCIS (Netherlands)

Verschelling, Eelco; van der Deijl, Eveline; van der Perk, Marcel; Sloff, Kees; Middelkoop, Hans

2017-01-01

Sediment deposition is one of the key mechanisms to counteract the impact of sea level rise in tidal freshwater wetlands (TFWs). However, information about sediment deposition rates in TFWs is limited, especially for those located in the transition zone between the fluvially dominated and tidally

Effects of discharge, wind, and tide on sedimentation in a recently restored tidal freshwater wetland

NARCIS (Netherlands)

Verschelling, Eelco; van der Deijl, Eveline; van der Perk, Marcel; Sloff, C.J.; Middelkoop, Hans

2017-01-01

Sediment deposition is one of the key mechanisms to counteract the impact of sea level rise in tidal freshwater wetlands (TFWs). However, information about sediment deposition rates in TFWs is limited, especially for those located in the transition zone between the fluvially dominated and tidally

Spatial and temporal variability of sediment accumulation rates on two tidal flats in Lister Dyb tidal basin, Wadden Sea, Denmark

DEFF Research Database (Denmark)

Madsen, Anni Tindahl; Murray, Andrew S.; Andersen, Thorbjørn Joest

2010-01-01

Depositional processes in intertidal areas are determined both by changes in sea-level and sediment supply. It is known on a millennial timescale that sedimentation normally keeps pace with sea-level rise in a subsiding tidal basin. However, little is known about whether the sedimentation can kee...

Suspended-sediment flux and retention in a backwater tidal slough complex near the landward boundary of an estuary

Science.gov (United States)

Morgan-King, Tara L.; Schoellhamer, David H.

2013-01-01

Backwater tidal sloughs are commonly found at the landward boundary of estuaries. The Cache Slough complex is a backwater tidal region within the Upper Sacramento–San Joaquin Delta that includes two features that are relevant for resource managers: (1) relatively high abundance of the endangered fish, delta smelt (Hypomesus transpacificus), which prefers turbid water and (2) a recently flooded shallow island, Liberty Island, that is a prototype for habitat restoration. We characterized the turbidity around Liberty Island by measuring suspended-sediment flux at four locations from July 2008 through December 2010. An estuarine turbidity maximum in the backwater Cache Slough complex is created by tidal asymmetry, a limited tidal excursion, and wind-wave resuspension. During the study, there was a net export of sediment, though sediment accumulates within the region from landward tidal transport during the dry season. Sediment is continually resuspended by both wind waves and flood tide currents. The suspended-sediment mass oscillates within the region until winter freshwater flow pulses flush it seaward. The hydrodynamic characteristics within the backwater region such as low freshwater flow during the dry season, flood tide dominance, and a limited tidal excursion favor sediment retention.

Sediment transport and deposition on a river-dominated tidal flat: An idealized model study

Science.gov (United States)

Sherwood, Christopher R.; Chen, Shih-Nan; Geyer, W. Rockwell; Ralston, David K.

2010-01-01

A 3-D hydrodynamic model is used to investigate how different size classes of river-derived sediment are transported, exported and trapped on an idealized, river-dominated tidal flat. The model is composed of a river channel flanked by sloping tidal flats, a configuration motivated by the intertidal region of the Skagit River mouth in Washington State, United States. It is forced by mixed tides and a pulse of freshwater and sediment with various settling velocities. In this system, the river not only influences stratification but also contributes a significant cross-shore transport. As a result, the bottom stress is strongly ebb-dominated in the channel because of the seaward advance of strong river flow as the tidal flats drain during ebbs. Sediment deposition patterns and mass budgets are sensitive to settling velocity. The lateral sediment spreading scales with an advective distance (settling time multiplied by lateral flow speed), thereby confining the fast settling sediment classes in the channel. Residual sediment transport is landward on the flats, because of settling lag, but is strongly seaward in the channel. The seaward transport mainly occurs during big ebbs and is controlled by a length scale ratio Ld/XWL, where Ld is a cross-shore advective distance (settling time multiplied by river outlet velocity), and XWL is the immersed cross-shore length of the intertidal zone. Sediment trapping requires Ld/XWL stratification and reducing tidal range both favor sediment trapping, whereas varying channel geometries and asymmetry of tides has relatively small impacts. Implications of the modeling results on the south Skagit intertidal region are discussed.

Quantifying tidally driven benthic oxygen exchange across permeable sediments

DEFF Research Database (Denmark)

McGinnis, Daniel F.; Sommer, Stefan; Lorke, Andreas

2014-01-01

Continental shelves are predominately (approximate to 70%) covered with permeable, sandy sediments. While identified as critical sites for intense oxygen, carbon, and nutrient turnover, constituent exchange across permeable sediments remains poorly quantified. The central North Sea largely consists...... of permeable sediments and has been identified as increasingly at risk for developing hypoxia. Therefore, we investigate the benthic O-2 exchange across the permeable North Sea sediments using a combination of in situ microprofiles, a benthic chamber, and aquatic eddy correlation. Tidal bottom currents drive...... the variable sediment O-2 penetration depth (from approximate to 3 to 8 mm) and the concurrent turbulence-driven 25-fold variation in the benthic sediment O-2 uptake. The O-2 flux and variability were reproduced using a simple 1-D model linking the benthic turbulence to the sediment pore water exchange...

Sediment discharge division at two tidally influenced river bifurcations

NARCIS (Netherlands)

Sassi, M.G.; Hoitink, A.J.F.; Vermeulen, B.; Hidayat, H.

2013-01-01

[1] We characterize and quantify the sediment discharge division at two tidally influenced river bifurcations in response to mean flow and secondary circulation by employing a boat-mounted acoustic Doppler current profiler (ADCP), to survey transects at bifurcating branches during a semidiurnal

On the Sediment Dynamics in a Tidally Energetic Channel: The Inner Sound, Northern Scotland

Directory of Open Access Journals (Sweden)

Jason McIlvenny

2016-04-01

Full Text Available Sediment banks within a fast-flowing tidal channel, the Inner Sound in the Pentland Firth, were mapped using multi-frequency side-scan sonar. This novel technique provides a new tool for seabed sediment and benthic habitat mapping. The sonar data are supplemented by sediment grab and ROV videos. The combined data provide detailed maps of persistent sand and shell banks present in the Sound despite the high energy environment. Acoustic Doppler Current Profiler (ADCP data and numerical model predictions were used to understand the hydrodynamics of the system. By combining the hydrodynamics and sediment distribution data, we explain the sediment dynamics in the area. Sediment particle shape and density, coupled with persistent features of the hydrodynamics, are the key factors in the distribution of sediment within the channel. Implications for tidal energy development planned for the Sound are discussed.

A novel method for sampling the suspended sediment load in the tidal environment using bi-directional time-integrated mass-flux sediment (TIMS) samplers

Science.gov (United States)

Elliott, Emily A.; Monbureau, Elaine; Walters, Glenn W.; Elliott, Mark A.; McKee, Brent A.; Rodriguez, Antonio B.

2017-12-01

Identifying the source and abundance of sediment transported within tidal creeks is essential for studying the connectivity between coastal watersheds and estuaries. The fine-grained suspended sediment load (SSL) makes up a substantial portion of the total sediment load carried within an estuarine system and efficient sampling of the SSL is critical to our understanding of nutrient and contaminant transport, anthropogenic influence, and the effects of climate. Unfortunately, traditional methods of sampling the SSL, including instantaneous measurements and automatic samplers, can be labor intensive, expensive and often yield insufficient mass for comprehensive geochemical analysis. In estuaries this issue is even more pronounced due to bi-directional tidal flow. This study tests the efficacy of a time-integrated mass sediment sampler (TIMS) design, originally developed for uni-directional flow within the fluvial environment, modified in this work for implementation the tidal environment under bi-directional flow conditions. Our new TIMS design utilizes an 'L' shaped outflow tube to prevent backflow, and when deployed in mirrored pairs, each sampler collects sediment uniquely in one direction of tidal flow. Laboratory flume experiments using dye and particle image velocimetry (PIV) were used to characterize the flow within the sampler, specifically, to quantify the settling velocities and identify stagnation points. Further laboratory tests of sediment indicate that bidirectional TIMS capture up to 96% of incoming SSL across a range of flow velocities (0.3-0.6 m s-1). The modified TIMS design was tested in the field at two distinct sampling locations within the tidal zone. Single-time point suspended sediment samples were collected at high and low tide and compared to time-integrated suspended sediment samples collected by the bi-directional TIMS over the same four-day period. Particle-size composition from the bi-directional TIMS were representative of the array of

Flow and sediment transport in an Indonesian tidal network

NARCIS (Netherlands)

Buschman, F.A.

2011-01-01

The Berau river, situated in east Kalimantan (Indonesia), drains a relatively small catchment area and splits into several interconnected tidal channels. This tidal network connects to the sea. The sea is host to extremely diverse coral reef communities. Also the land side of the region is

Effects of causeway construction on vegetation and sedimentation in North Carolina tidal marshes

Science.gov (United States)

Knowlton, A.; Leonard, L.; Pricope, N. G.; Eulie, D.

2017-12-01

Causeways, especially those constructed to facilitate transportation across low lying tidal marshes, are known to affect tidal exchanges and thereby potentially influence geological and biological processes in these ecosystems. While these impacts have been documented in several expansive marsh systems with large tidal ranges, the extent of these impacts in smaller tidal creek watersheds is less understood. This study examined how the presence, absence, and removal of small causeways affected sedimentological processes and vegetation characteristics in two small tidal creek watersheds in Wilmington, NC. Surficial deposition rates, determined using petri-dish sediment traps, indicate that mean deposition landward of a small causeway (1.64 mg cm-2day-1) is significantly lower (pchanges adjacent to the causeway. Partial causeway removal in one of these systems in 2006 also provided the opportunity to evaluate how the marsh canopy responded to causeway removal. Using Juncus roemerianus and Spartina alterniflora as a proxy for changes in tidal exchange, spectroradiometer data and aerial imagery available in 2006 and 2016 will be used to quantify changes in canopy coverage subsequent to causeway removal. Although this study is ongoing, the preliminary results indicate that small causeways, similar to their larger counterparts, significantly affect the rate and characteristics of sediment delivered to landward marshes and also affect tidal exchanges that lead to changes in vegetation characteristics.

Has phytodetritus processing by an abyssal soft-sediment community recovered 26 years after an experimental disturbance?

NARCIS (Netherlands)

Stratmann, T.; Mevenkamp, L.; Sweetman, A.K.; Vanreusel, A.; van Oevelen, D.

2018-01-01

The potential harvest of polymetallic nodules will heavily impact the abyssal, soft sediment ecosystem by removing sediment, hard substrate, and associated fauna inside mined areas. It is therefore important to know whether the ecosystem can recover from this disturbance and if so at which rate. The

Punctuated sediment record resulting from channel migration in a shallow sand-dominated micro-tidal lagoon, Northern Wadden Sea, Denmark

DEFF Research Database (Denmark)

Fruergaard, M.; Andersen, T.J.; Nielsen, L.H.

2011-01-01

depositional environment, but tidal channel sediments dominate in the five sediment cores, making up 56% of the 15 mof sediment core. Sedimentation in the lagoon alternated between slow vertical aggradation of sand flats (1.5–2 mm yr-1) and very fast lateral progradation of point bars in tidal channels, which...... caused the formation of a punctuated lagoonal fill. Frequent and comprehensive reworking of the sand flat sediments by tidal channel migration entails loss of sedimentary structures and bioturbation related to sand flat deposits, and old sand flat sediments are only very sparsely preserved. We further...... conclude that long-term (millennial timescale) sediment accumulation in the lagoon was controlled by rising sea-level, whereas short-term (centurial timescale) sediment accumulation was controlled by local erosion and depositional events caused by lateral migration of channels. Records of short-term sea...

Suspended-sediment dynamics in the tidal reach of a San Francisco Bay tributary

Science.gov (United States)

Shellenbarger, Gregory; Downing-Kunz, Maureen; Schoellhamer, David H.

2015-01-01

To better understand suspended-sediment transport in a tidal slough adjacent to a large wetland restoration project, we deployed continuously measuring temperature, salinity, depth, turbidity, and velocity sensors in 2010 at a near-bottom location in Alviso Slough (Alviso, California, USA). Alviso Slough is the downstream reach of the Guadalupe River and flows into the far southern end of San Francisco Bay. River flow is influenced by the Mediterranean climate, with high flows (∼90 m3 s−1) correlated to episodic winter storms and low base flow (∼0.85 m3 s−1) during the summer. Storms and associated runoff have a large influence on sediment flux for brief periods, but the annual peak sediment concentrations in the slough, which occur in April and May, are similar to the rest of this part of the bay and are not directly related to peak discharge events. Strong spring tides promote a large upstream sediment flux as a front associated with the passage of a salt wedge during flood tide. Neap tides do not have flood-directed fronts, but a front seen sometimes during ebb tide appears to be associated with the breakdown of stratification in the slough. During neap tides, stratification likely suppresses sediment transport during weaker flood and ebb tides. The slough is flood dominant during spring tides, and ebb dominant during neap tides. Extreme events in landward (salt wedge) and bayward (rainfall events) suspended-sediment flux account for 5.0 % of the total sediment flux in the slough and only 0.55 % of the samples. The remaining 95 % of the total sediment flux is due to tidal transport, with an imbalance in the daily tidal transport producing net landward flux. Overall, net sediment transport during this study was landward indicating that sediment in the sloughs may not be flushed to the bay and are available for sedimentation in the adjacent marshes and ponds.

The use of modeling and suspended sediment concentration measurements for quantifying net suspended sediment transport through a large tidally dominated inlet

Science.gov (United States)

Erikson, Li H.; Wright, Scott A.; Elias, Edwin; Hanes, Daniel M.; Schoellhamer, David H.; Largier, John; Barnard, P.L.; Jaffee, B.E.; Schoellhamer, D.H.

2013-01-01

Sediment exchange at large energetic inlets is often difficult to quantify due complex flows, massive amounts of water and sediment exchange, and environmental conditions limiting long-term data collection. In an effort to better quantify such exchange this study investigated the use of suspended sediment concentrations (SSC) measured at an offsite location as a surrogate for sediment exchange at the tidally dominated Golden Gate inlet in San Francisco, CA. A numerical model was calibrated and validated against water and suspended sediment flux measured during a spring–neap tide cycle across the Golden Gate. The model was then run for five months and net exchange was calculated on a tidal time-scale and compared to SSC measurements at the Alcatraz monitoring site located in Central San Francisco Bay ~ 5 km from the Golden Gate. Numerically modeled tide averaged flux across the Golden Gate compared well (r2 = 0.86, p-value

Major changes in the ecology of the Wadden Sea: human impacts, ecosystem engineering and sediment dynamics

NARCIS (Netherlands)

Eriksson, B.K.; van der Heide, T.; Van de Koppel, J.; Piersma, T.; Van der Veer, H.W.; Olff, H.

2010-01-01

Shallow soft-sediment systems are mostly dominated by species that, by strongly affecting sediment dynamics, modify their local environment. Such ecosystem engineering species can have either sediment-stabilizing or sediment-destabilizing effects on tidal flats. They interplay with abiotic forcing

Time to stop mucking around? Impacts of underwater photography on cryptobenthic fauna found in soft sediment habitats.

Science.gov (United States)

De Brauwer, Maarten; Saunders, Benjamin J; Ambo-Rappe, Rohani; Jompa, Jamaluddin; McIlwain, Jennifer L; Harvey, Euan S

2018-07-15

Scuba diving tourism is a sustainable source of income for many coastal communities, but can have negative environmental impacts if not managed effectively. Diving on soft sediment habitats, typically referred to as 'muck diving', is a growing multi-million dollar industry with a strong focus on photographing cryptobenthic fauna. We assessed how the environmental impacts of scuba divers are affected by the activity they are engaged in while diving and the habitat they dive in. To do this, we observed 66 divers on coral reefs and soft sediment habitats in Indonesia and the Philippines. We found diver activity, specifically interacting with and photographing fauna, causes greater environmental disturbances than effects caused by certification level, gender, dive experience or age. Divers touched the substrate more often while diving on soft sediment habitats than on coral reefs, but this did not result in greater environmental damage on soft sediment sites. Divers had a higher impact on the substrate and touch animals more frequently when observing or photographing cryptobenthic fauna. When using dSLR-cameras, divers spent up to five times longer interacting with fauna. With the unknown, long-term impacts on cryptobenthic fauna or soft sediment habitats, and the increasing popularity of underwater photography, we argue for the introduction of a muck diving code of conduct. Copyright © 2018 Elsevier Ltd. All rights reserved.

Tidal and longshore sediment transport associated to a coastal structure

Science.gov (United States)

Cuadrado, Diana G.; Gómez, Eduardo A.; Ginsberg, S. Susana

2005-01-01

In order to understand the subtidal marine dynamics relative to the coastal engineering works in the Bahía Blanca Estuary (Argentina), the balance of sediment transport caused by tidal currents was estimated in the Puerto Rosales area and compared with the predicted potential littoral transport. The breaking wave height used in the littoral drift calculation was estimated after applying different wave transforming procedures over the deepwater wave which was predicted by the occurrence of predominant wind, blowing long enough in an essentially constant direction over a fetch. The effect of a breakwater on currents and circulation was studied by bathymetric and side-scan sonar records, sedimentology, and tidal current measurements. Different modes of transport occur on either sides of the breakwater. On the east side, longshore transport is the principal mode, and on the west side, tidal transport is predominant.

Measurements of gaseous mercury exchanges at the sediment-water, water-atmosphere and sediment-atmosphere interfaces of a tidal environment (Arcachon Bay, France).

Science.gov (United States)

Bouchet, Sylvain; Tessier, Emmanuel; Monperrus, Mathilde; Bridou, Romain; Clavier, Jacques; Thouzeau, Gerard; Amouroux, David

2011-05-01

The elemental mercury evasion from non-impacted natural areas is of significant importance in the global Hg cycle due to their large spatial coverage. Intertidal areas represent a dynamic environment promoting the transformations of Hg species and their subsequent redistribution. A major challenge remains in providing reliable data on Hg species variability and fluxes under typical transient tidal conditions found in such environment. Field experiments were thus carried out to allow the assessment and comparison of the magnitude of the gaseous Hg fluxes at the three interfaces, sediment-water, sediment-atmosphere and water-atmosphere of a mesotidal temperate lagoon (Arcachon Bay, Aquitaine, France) over three distinct seasonal conditions. The fluxes between the sediment-water and the sediment-atmosphere interfaces were directly evaluated with field flux chambers, respectively static or dynamic. Water-atmosphere fluxes were evaluated from ambient concentrations using a gas exchange model. The fluxes at the sediment-water interface ranged from -5.0 to 5.1 ng m(-2) h(-1) and appeared mainly controlled by diffusion. The occurrence of macrophytic covers (i.e.Zostera noltii sp.) enhanced the fluxes under light radiations. The first direct measurements of sediment-atmosphere fluxes are reported here. The exchanges were more intense and variable than the two other interfaces, ranging between -78 and 40 ng m(-2) h(-1) and were mostly driven by the overlying atmospheric Hg concentrations and superficial sediment temperature. The exchanges between the water column and the atmosphere, computed as a function of wind speed and gaseous mercury saturation ranged from 0.4 to 14.5 ng m(-2) h(-1). The flux intensities recorded over the intertidal sediments periodically exposed to the atmosphere were roughly 2 to 3 times higher than the fluxes of the other interfaces. The evasion of elemental mercury from emerged intertidal sediments is probably a significant pathway for Hg evasion in

The role of seasonal sediment storage in tidal channels on a mesotidal delta

Science.gov (United States)

Hale, R. P.; Wilson, C.; Bomer, J.; Goodbred, S. L., Jr.; Bain, R. L.

2017-12-01

The Sundarbans National Forest (SNF), located on the modern topset of the Ganges-Brahmaputra-Meghna (GBM) Delta, is the world's largest mangrove stand ( 10,000 km2), and provides a wide range of cultural, environmental, and economic benefits to the nation of Bangladesh. At present, sediment accretion in the SNF occurs at a rate comparable to that of the locally accelerated sea-level rise ( 1.1 cm/yr), despite substantial modification of the regional hydrodynamics via the construction of channel embankments to prevent inundation of agricultural areas. Approximately 50% of the sediment deposited in the SNF each year is recently delivered (water diversions associated with India's National River Linking Project raises serious concerns over the SNF's continued sustainability. Here, we examine: 1) the capacity for short-term sediment storage within tidal channels of varying dimensions, and 2) the hydrodynamic conditions responsible for resuspending this material and delivering it to the mangrove platform. We compare textural and radiochemical characteristics from short cores (<50 cm) collected along the intertidal channel banks, with those from the mangrove platform, to assess seasonal storage of GBM sediment within tidal channels, and the timeframe of its delivery to the SNF platform. We also present instrument data from multiple locations within a confined basin of the SNF, using an upward-looking acoustic Doppler current profiler, pressure sensors, and optical backscatter sensors, to document how transport conditions vary with distance away from the primary tidal inlet, and across the platform. This collection of physical and instrumental observations is then compared to an existing dataset of platform inundation hydroperiods and deposition rates, allowing us to address the threat of a reduced sediment supply to this region, as well as the capacity for this system to self-supply sediment to the platform.

Long-term organic carbon sequestration in tidal marsh sediments is dominated by old-aged allochthonous inputs in a macrotidal estuary.

Science.gov (United States)

Van de Broek, Marijn; Vandendriessche, Caroline; Poppelmonde, Dries; Merckx, Roel; Temmerman, Stijn; Govers, Gerard

2018-02-12

Tidal marshes are vegetated coastal ecosystems that are often considered as hotspots of atmospheric CO 2 sequestration. Although large amounts of organic carbon (OC) are indeed being deposited on tidal marshes, there is no direct link between high OC deposition rates and high OC sequestration rates due to two main reasons. First, the deposited OC may become rapidly decomposed once it is buried and, second, a significant part of preserved OC may be allochthonous OC that has been sequestered elsewhere. In this study we aimed to identify the mechanisms controlling long-term OC sequestration in tidal marsh sediments along an estuarine salinity gradient (Scheldt estuary, Belgium and the Netherlands). Analyses of deposited sediments have shown that OC deposited during tidal inundations is up to millennia old. This allochthonous OC is the main component of OC that is effectively preserved in these sediments, as indicated by the low radiocarbon content of buried OC. Furthermore, OC fractionation showed that autochthonous OC is decomposed on a decadal timescale in saltmarsh sediments, while in freshwater marsh sediments locally produced biomass is more efficiently preserved after burial. Our results show that long-term OC sequestration is decoupled from local biomass production in the studied tidal marsh sediments. This implies that OC sequestration rates are greatly overestimated when they are calculated based on short-term OC deposition rates, which are controlled by labile autochthonous OC inputs. Moreover, as allochthonous OC is not sequestered in-situ, it does not contribute to active atmospheric CO 2 sequestration in these ecosystems. A correct assessment of the contribution of allochthonous OC to the total sedimentary OC stock in tidal marsh sediments as well as a correct understanding of the long-term fate of locally produced OC are both necessary to avoid overestimations of the rate of in-situ atmospheric CO 2 sequestration in tidal marsh sediments. © 2018 John

Tidal-scale flow routing and sedimentation in mangrove forests: combining field data and numerical modelling

NARCIS (Netherlands)

Horstman, Erik; Dohmen-Janssen, Catarine M.; Bouma, T.J.; Hulscher, Suzanne J.M.H.

2015-01-01

Tidal-scale biophysical interactions establish particular flow routing and sedimentation patterns in coastal mangroves. Sluggish water flows through the mangrove vegetation and enhanced sediment deposition are essential to maintain these valuable ecosystems, thereby enabling their contribution to

Transverse structure of tidal flow, residual flow and sediment concentration in estuaries: sensitivity to tidal forcing and water depth

NARCIS (Netherlands)

Huijts, K.M.H.|info:eu-repo/dai/nl/304831867; de Swart, H.E.|info:eu-repo/dai/nl/073449725; Schramkowski, G.P.; Schuttelaars, H.M.

2011-01-01

An analytical and a numerical model are used to understand the response of velocity and sediment distributions over Gaussian-shaped estuarine cross-sections to changes in tidal forcing and water depth. The estuaries considered here are characterized by strong mixing and a relatively weak

Biogenic silica in tidal freshwater marsh sediments and vegetation (Schelde estuary, Belgium)

NARCIS (Netherlands)

Struyf, E.; van Damme, S.; Gribsholt, B.; Middelburg, J.J.; Meire, P.

2005-01-01

To date, estuarine ecosystem research has mostly neglected silica cycling in freshwater intertidal marshes. However, tidal marshes can store large amounts of biogenic silica (BSi) in vegetation and sediment. BSi content of the typical freshwater marsh plants Phragmites australis, Impatiens

Kinetics of trace metal removal from tidal water by mangrove sediments under different redox conditions

International Nuclear Information System (INIS)

Suzuki, K.N.; Machado, E.C.; Machado, W.; Bellido, A.V.B.; Bellido, L.F.; Osso, J.A.; Lopes, R.T.

2014-01-01

The extent in which redox conditions can affect the removal kinetics of 58 Co and 65 Zn from tidal water by mangrove sediments was evaluated in microcosm experiments, simulating a tidal flooding period of 6 h. The average half-removal time (t 1/2 ) of 58 Co from overlaying water was slightly higher (7.3 h) under an N 2 -purged water column than under an aerated water column (5.4 h). A lower difference was found for 65 Zn (1.9 h vs. 1.5 h, respectively). Average removals of 58 Co activities from water were 54.6% (N 2 treatment) and 43.5% (aeration treatment), whereas these values were 88.0% and 92.7% for 65 Zn, respectively. Very contrasting sorption kinetics of different radiotracers occurred, while more oxidising conditions favoured only a slightly higher removal. Average 58 Co and 65 Zn inventories within sediments were 30.4% and 18.8% higher in the aeration treatment, respectively. A stronger particle-reactive behaviour was found for 65 Zn that was less redox-sensitive and more efficiently removed by sediments than 58 Co. - Highlights: ► Radiotracer experiments evidenced the role of mangrove sediments in trapping trace metals. ► Very contrasting removal kinetics from tidal water were observed for 65 Zn and 58 Co. ► Nearly 40%–50% of 58 Co activities and nearly 90% of 65 Zn activities in overlying water were removed. ► 65 Zn showed a stronger particle-reactive behaviour than observed for 58 Co. ► 58 Co was more sensitive to redox conditions in tidal water than observed for 65 Zn

Phytoremediation as a management option for contaminated sediments in tidal marshes, flood control areas and dredged sediment landfill sites.

Science.gov (United States)

Bert, Valérie; Seuntjens, Piet; Dejonghe, Winnie; Lacherez, Sophie; Thuy, Hoang Thi Thanh; Vandecasteele, Bart

2009-11-01

Polluted sediments in rivers may be transported by the river to the sea, spread over river banks and tidal marshes or managed, i.e. actively dredged and disposed of on land. Once sedimented on tidal marshes, alluvial areas or control flood areas, the polluted sediments enter semi-terrestrial ecosystems or agro-ecosystems and may pose a risk. Disposal of polluted dredged sediments on land may also lead to certain risks. Up to a few years ago, contaminated dredged sediments were placed in confined disposal facilities. The European policy encourages sediment valorisation and this will be a technological challenge for the near future. Currently, contaminated dredged sediments are often not valorisable due to their high content of contaminants and their consequent hazardous properties. In addition, it is generally admitted that treatment and re-use of heavily contaminated dredged sediments is not a cost-effective alternative to confined disposal. For contaminated sediments and associated disposal facilities used in the past, a realistic, low cost, safe, ecologically sound and sustainable management option is required. In this context, phytoremediation is proposed in the literature as a management option. The aim of this paper is to review the current knowledge on management, (phyto)remediation and associated risks in the particular case of sediments contaminated with organic and inorganic pollutants. This paper deals with the following features: (1) management and remediation of contaminated sediments and associated risk assessment; (2) management options for ecosystems on polluted sediments, based on phytoremediation of contaminated sediments with focus on phytoextraction, phytostabilisation and phytoremediation of organic pollutants and (3) microbial and mycorrhizal processes occurring in contaminated sediments during phytoremediation. In this review, an overview is given of phytoremediation as a management option for semi-terrestrial and terrestrial ecosystems

Polycyclic aromatic hydrocarbon (PAH) contamination of surface sediments and oysters from the inter-tidal areas of Dar es Salaam, Tanzania

International Nuclear Information System (INIS)

Gaspare, Lydia; Machiwa, John F.; Mdachi, S.J.M.; Streck, Georg; Brack, Werner

2009-01-01

Surface sediment and oyster samples from the inter-tidal areas of Dar es Salaam were analyzed for 23 polycyclic aromatic hydrocarbons (PAHs) including the 16 compounds prioritized by US-EPA using GC/MS. The total concentration of PAHs in the sediment ranged from 78 to 25,000 ng/g dry weight, while oyster concentrations ranged from 170 to 650 ng/g dry weight. Hazards due to sediment contamination were assessed using Equilibrium Partitioning Sediment Benchmarks and Threshold Effect Levels. Diagnostic indices and principle component analysis were used to identify possible sources. Interestingly, no correlation between sediment and oyster concentrations at the same sites was found. This is supported by completely different contamination patterns, suggesting different sources for both matrices. Hazard assessment revealed possible effects at six out of eight sites on the benthic communities and oyster populations. The contribution of PAH intake via oyster consumption to carcinogenic risks in humans seems to be low. - PAH contamination may pose hazards to benthos but limited risks to humans

Polycyclic aromatic hydrocarbon (PAH) contamination of surface sediments and oysters from the inter-tidal areas of Dar es Salaam, Tanzania

Energy Technology Data Exchange (ETDEWEB)

Gaspare, Lydia; Machiwa, John F. [Department of Aquatic Environment and Conservation, University of Dar es Salaam, P.O. Box 60091, Dar es Salaam (Tanzania, United Republic of); Mdachi, S.J.M. [Department of Chemistry, University of Dar es Salaam, P.O. Box 35062, Dar es Salaam (Tanzania, United Republic of); Streck, Georg [UFZ Helmholtz Centre for Environmental Research Leipzig-Halle, Department of Effect-Directed Analysis, Permoserstrasse 15, 04318 Leipzig (Germany); Brack, Werner [UFZ Helmholtz Centre for Environmental Research Leipzig-Halle, Department of Effect-Directed Analysis, Permoserstrasse 15, 04318 Leipzig (Germany)], E-mail: werner.brack@ufz.de

2009-01-15

Surface sediment and oyster samples from the inter-tidal areas of Dar es Salaam were analyzed for 23 polycyclic aromatic hydrocarbons (PAHs) including the 16 compounds prioritized by US-EPA using GC/MS. The total concentration of PAHs in the sediment ranged from 78 to 25,000 ng/g dry weight, while oyster concentrations ranged from 170 to 650 ng/g dry weight. Hazards due to sediment contamination were assessed using Equilibrium Partitioning Sediment Benchmarks and Threshold Effect Levels. Diagnostic indices and principle component analysis were used to identify possible sources. Interestingly, no correlation between sediment and oyster concentrations at the same sites was found. This is supported by completely different contamination patterns, suggesting different sources for both matrices. Hazard assessment revealed possible effects at six out of eight sites on the benthic communities and oyster populations. The contribution of PAH intake via oyster consumption to carcinogenic risks in humans seems to be low. - PAH contamination may pose hazards to benthos but limited risks to humans.

Soft-sediment deformation structures interpreted as seismites in the uppermost Aptian to lowermost Albian transgressive deposits of the Chihuahua basin (Mexico)

Science.gov (United States)

Blanc, E.J.-P.; Blanc-Aletru, M. -C.; Mojon, P.-O.

1998-01-01

Several levels of soft-sediment deformation structures (s.-s.d.s.) cut by synsedimentary normal faults have been observed in the transition beds between the "Las Vigas" and "La Virgen" formations (Cretaceous) in the northeastern part of the Chihuahua basin in Mexico. These structures consisted of four kinds of motifs (floating breccias, flame-like structures, large pillow structures, and wavy structures). They are restricted to five "stratigraphie" levels (Z1-Z5) and surrounded by undeformed beds in fluvio-lacustrine and tidal deposits and can be traced over a distance of several hundred meters. This deformation is interpreted to have resulted from the combined effects of liquidization and shear stress in soft-sediments due to local earthquakes in the area which could have been generated during the rifting stage of the Chihuahua basin. New constraints placed on the age of the "Las Vigas" Formation (bracketed by Late Aptian charophytes at the bottom and colomiellids of late Aptian to earliest Albian age at the top) suggest that this synrift tectonism lasted at least until the end of the Aptian. ?? Springer-Verlag 1998.

Seasonal variability of tidal and non-tidal currents off Beypore, SW coast of India

Digital Repository Service at National Institute of Oceanography (India)

DineshKumar, P.K.; Srinivas, K.; AnilKumar, N.

and summer monsoon seasons of year 2000. Information on tidal signals contained in the currents were extracted using harmonic analysis - Least Squares Method and non-tidal component were analyzed using the Chi sub(o) filter. The study established...

Dynamics of tidal and non-tidal currents along the southwest continental shelf of India

Digital Repository Service at National Institute of Oceanography (India)

Aruna, C.; Ravichandran, C.; Srinivas, K.; Rasheed, P.A.A.; Lekshmi, S.

are predominantly mixed, semidiurnal in nature. Motion over any continental shelf is governed by the tide-driven oscillatory flow. In this paper, tidal and non-tidal characteristics of the waters of Southwest continental shelf of India are assessed using...

impact of vegetation on flow routing and sedimentation patterns : three-dimensional modeling for a tidal marsh

NARCIS (Netherlands)

Temmerman, S.; Bouma, T.J.; De Vries, M.B.; Wang, Z.B.; Govers, G.; Herman, P.M.J.

2005-01-01

A three-dimensional hydrodynamic and sediment transport model was used to study the relative impact of (1) vegetation, (2) micro-topography, and (3) water level fluctuations on the spatial flow and sedimentation patterns in a tidal marsh landscape during single inundation events. The model

Impact of vegetation on flow routing and sedimentation patterns : three-dimensional modeling for a tidal marsh

NARCIS (Netherlands)

Temmerman, S.; Bouma, T.J.; Govers, G.; Wang, Z.B.; de Vries, M.B.; Herman, P.M.J.

2005-01-01

A three-dimensional hydrodynamic and sediment transport model was used to study the relative impact of (1) vegetation, (2) micro-topography, and (3) water level fluctuations on the spatial flow and sedimentation patterns in a tidal marsh landscape during single inundation events. The model

Variability of residual fluxes of suspended sediment in a multiple tidal-inlet system : the Dutch Wadden Sea

NARCIS (Netherlands)

Sassi, M.; Duran-Matute, M.; van Kessel, Th.; Gerkema, Th.

2015-01-01

In multiple tidal-inlet systems such as the Dutch Wadden Sea, the exchange of sediments between the coastal lagoon and the adjacent sea is controlled by the combined effect of the tides, wind-driven flows, and density-driven flows. We investigate the variability of residual (tidally averaged) fluxes

Facies architecture of heterolithic tidal deposits : The Holocene Holland Tidal Basin

NARCIS (Netherlands)

Donselaar, M.E.; Geel, C.R.

2007-01-01

The size, shape and spatial position of lithofacies types (or facies architecture) in a tidal estuarine basin are complex and therefore difficult to model. The tidal currents in the basin concentrate sand-sized sediment in a branching pattern of tidal channels and fringing tidal flats. Away from the

Lagoon Sediment Dynamics: A Coupled Model to Study a Medium-Term Silting of Tidal Channels

Directory of Open Access Journals (Sweden)

Marco Petti

2018-04-01

Full Text Available The silting of tidal channels is a natural process that affects several shallow lagoons and makes it difficult to navigate, requiring regular maintenance interventions. This phenomenon is the result of the complex non-linear interaction between tidal currents and wave motion. In this work, the morphodynamic evolution of the Marano and Grado lagoon is investigated by means of a two-dimensional horizontal (2DH morphological-hydrodynamic and a spectral coupled model. An innovative procedure to reproduce the overall bathymetric changes in the medium term and, in particular, the volumes deposited inside channels, is presented. An average year with a sequence of winds and tides acting over that time was reconstructed, carrying out cross correlation techniques and spectral analyses of measured data. The predicted morphological evolution matches the annual dredged volumes in the lagoon critical branches and shows the distribution of erosion and deposition of cohesive sediments according to spatially variable values of critical shear stress.

SOFT X-RAY TEMPERATURE TIDAL DISRUPTION EVENTS FROM STARS ON DEEP PLUNGING ORBITS

Energy Technology Data Exchange (ETDEWEB)

Dai, Lixin; McKinney, Jonathan C.; Miller, M. Coleman, E-mail: cosimo@umd.edu [Department of Astronomy and Joint Space-Science Institute, University of Maryland, College Park, MD 20742 (United States)

2015-10-20

One of the puzzles associated with tidal disruption event candidates (TDEs) is that there is a dichotomy between the color temperatures of a few × 10{sup 4} K for TDEs discovered with optical and UV telescopes and the color temperatures of a few × 10{sup 5}–10{sup 6} K for TDEs discovered with X-ray satellites. Here, we propose that high-temperature TDEs are produced when the tidal debris of a disrupted star self-intersects relatively close to the supermassive black hole, in contrast to the more distant self-intersection that leads to lower color temperatures. In particular, we note from simple ballistic considerations that greater apsidal precession in an orbit is the key to closer self-intersection. Thus, larger values of β, the ratio of the tidal radius to the pericenter distance of the initial orbit, are more likely to lead to higher temperatures of more compact disks that are super-Eddington and geometrically and optically thick. For a given star and β, apsidal precession also increases for larger black hole masses, but larger black hole masses imply a lower temperature at the Eddington luminosity. Thus, the expected dependence of the temperature on the mass of the black hole is non-monotonic. We find that in order to produce a soft X-ray temperature TDE, a deep plunging stellar orbit with β > 3 is needed and a black hole mass of ≲5 × 10{sup 6}M{sub ⊙} is favored. Although observations of TDEs are comparatively scarce and are likely dominated by selection effects, it is encouraging that both expectations are consistent with current data.

Changes in Alaskan soft-bottom prey communities along a gradient in sea otter predation

Science.gov (United States)

Kvitek, R.G.; Oliver, J.S.; DeGange, A.R.; Anderson, B.S.

1992-01-01

Sea Otter (Enhydra lutris), well documented as "keystone" predators in rocky marine communities, were found to exert a strong influence on infaunal prey communities in soft-sediment habitats. Direct and indirect effects of sea otter predation on subtidal soft-bottom prey communities were evaluated along a temporal gradient of sea otter occupancy around the Kodiak Archipelago. The results indicate that Kodiak otters forage primarily on bivalve prey and dramatically reduce infaunal bivalve and green sea urchin (Strongylocentrotus droebachiensis) prey populations. Bivalve prey abundance, biomass, and size were inversely related to duration of sea otter occupancy. The relative conditions of shells discarded by otters in shallow ( 20 m) water at the same sites indicate that otters first exploited Saxidomus in shallow-water feeding areas, and later switched to Macoma spp. in deeper water. Otter-cracked shells of the deep-burrowing clam Tresus capax were rarely found, even at otter foraging sites where the clam accounted for the majority of available prey biomass, suggesting that it has a partial depth refuge from otter predation. The indirect effects of otter predation included substratum disturbance and the facilitation of sea star predation on infaunal prey. Sea stars, Pycnopodia helianthoides, were attracted to experimentally dug excavations as well as natural sea otter foraging pits, where the sea stars foraged on smaller size classes of infaunal bivalves than those eaten by otters. Otters also discard clam shells on the sediment surface and expose old, buried shells during excavation. Surface shells were found to provide attachment sites for large anemones and kelp. Our study shows that sea otters can affect soft-sediment communities, not only through predation, as in rocky habitats, but also through disturbance, and thus retain a high degree of influence in two very different habitat types.

Heterogeneous distribution of prokaryotes and viruses at the microscale in a tidal sediment

DEFF Research Database (Denmark)

Carreira, Cátia; Larsen, Morten; Glud, Ronnie

2013-01-01

In this study we show for the first time the microscale (mm) 2- and 3-dimensional spatial distribution and abundance of prokaryotes, viruses, and oxygen in a tidal sediment. Prokaryotes and viruses were highly heterogeneously distributed with patches of elevated abundances surrounded by areas of ...

Tidal Creek Morphology and Sediment Type Influence Spatial Trends in Salt Marsh Vegetation

DEFF Research Database (Denmark)

Kim, Daehyun; Cairns, David M.; Bartholdy, Jesper

2013-01-01

that by shaping major geomorphic features and providing sediments to the adjacent sites, fluvial-geomorphic processes of tidal creeks exert fundamental controls on the cross-channel distribution of abiotic and biotic factors. These results point to a need for biogeomorphic and landscape ecological perspectives...

Tidal controls on river delta morphology

Science.gov (United States)

Hoitink, A. J. F.; Wang, Z. B.; Vermeulen, B.; Huismans, Y.; Kästner, K.

2017-09-01

River delta degradation has been caused by extraction of natural resources, sediment retention by reservoirs, and sea-level rise. Despite global concerns about these issues, human activity in the world’s largest deltas intensifies. Harbour development, construction of flood defences, sand mining and land reclamation emerge as key contemporary factors that exert an impact on delta morphology. Tides interacting with river discharge can play a crucial role in the morphodynamic development of deltas under pressure. Emerging insights into tidal controls on river delta morphology suggest that--despite the active morphodynamics in tidal channels and mouth bar regions--tidal motion acts to stabilize delta morphology at the landscape scale under the condition that sediment import during low flows largely balances sediment export during high flows. Distributary channels subject to tides show lower migration rates and are less easily flooded by the river because of opposing non-linear interactions between river discharge and the tide. These interactions lead to flow changes within channels, and a more uniform distribution of discharge across channels. Sediment depletion and rigorous human interventions in deltas, including storm surge defence works, disrupt the dynamic morphological equilibrium and can lead to erosion and severe scour at the channel bed, even decades after an intervention.

Recognising triggers for soft-sediment deformation: Current understanding and future directions

Science.gov (United States)

Owen, Geraint; Moretti, Massimo; Alfaro, Pedro

2011-04-01

Most of the 16 papers in this special issue were presented at a session entitled "The recognition of trigger mechanisms for soft-sediment deformation" at the 27th IAS Meeting of Sedimentology in Alghero, Sardinia, Italy, which took place from 20th-23rd September 2009. They describe soft-sediment deformation structures that range widely in morphology, age, depositional environment and tectonic setting. In their interpretations, the authors have been asked to focus on identifying the agent that triggered deformation. Our aims in this introductory overview are to: (1) review the definition and scope of soft-sediment deformation; (2) clarify the significance and role of the trigger; (3) set the contributions in context and summarise their findings; and (4) discuss strategies for reliably identifying triggers and make recommendations for future study of this widespread and significant category of sedimentary structures. We recommend a three-stage approach to trigger recognition, combining the assessment of facies, potential triggers, and available criteria. This focus on the trigger for deformation distinguishes this collection of papers on soft-sediment deformation from other important collections, notably those edited by Jones and Preston (1987), Maltman (1994), Maltman et al. (2000), Shiki et al. (2000), Ettensohn et al. (2002b), Van Rensbergen et al. (2003) and Storti and Vannucchi (2007).

Observations of transitional tidal boundary layers and their impact on sediment transport in the Great Bay, NH

Science.gov (United States)

Koetje, K. M.; Foster, D. L.; Lippmann, T. C.

2017-12-01

Observations of the vertical structure of tidal flows obtained in 2016 and 2017 in the Great Bay Estuary, NH show evidence of transitional tidal boundary layers at deployment locations on shallow mudflats. High-resolution bottom boundary layer currents, hydrography, turbidity, and bed characteristics were observed with an acoustic Doppler current profiler (ADCP), an acoustic Doppler velocimeter (ADV), conductivity-depth-temperature (CTD) sensors, optical backscatter sensors, multibeam bathymetric surveys, and sediment grab samples and cores. Over the 2.5 m tidal range and at water depths ranging from 0.3 m to 1.5 m at mean lower low water, peak flows ranged from 10 cm/s to 30 cm/s and were primarily driven by the tides. A downward-looking ADCP captured the velocity profile over the lowest 1 m of the water column. Results consistently show a dual-log layer system, with evidence of a lower layer within 15 cm of the bed, another layer above approximately 30 cm from the bed, and a transitional region where the flow field rotates between that the two layers that can be as much as 180 degrees out of phase. CTD casts collected over a complete tidal cycle suggest that the weak thermohaline stratification is not responsible for development of the two layers. On the other hand, acoustic and optical backscatter measurements show spatial and temporal variability in suspended sediments that are dependant on tidal phase. Current work includes an examination of the relationship between sediment concentrations in the water column and velocity profile characteristics, along with an effort to quantify the impact of rotation and dual-log layers on bed stress.

Sediment Accretion, Carbon Sequestration, and Resilience to Sea Level Rise in Natural and Recently Restored Tidal Marshes

Science.gov (United States)

Poppe, K.; Rybczyk, J.; Parr, L.; Merrill, A.

2017-12-01

Tidal marshes are typically productive and depositional environments potentially conducive to high rates of carbon sequestration. Though they have been recognized globally for their ability to store "blue carbon", there is a paucity of comprehensive site-scale data from the Pacific Northwest U.S. Here we report carbon stocks and sequestration rates for an existing and a recently restored brackish marsh in the Stillaguamish River Estuary, in Puget Sound, Washington. The Stillaguamish River discharges into the Port Susan Bay Preserve which contains a 150-acre tidal marsh restoration site that was reintroduced to the tidal regime in 2012 from its previous use as diked and drained farmland. We hypothesized that the restoration would not only maximize carbon storage in former tidal wetlands but also, through the accumulation of organic and mineral matter, enhance these systems' resilience to rising sea levels. We collected sediment cores from 13 sites across the estuary, within and outside of the restoration area, to determine bulk density, organic and carbon content with depth, long-term accretion rates, and belowground biomass. We also measured aboveground net primary productivity. Carbon stocks at each site were partitioned into three components as recommended by the IPCC: aboveground biomass, belowground biomass, and sediment carbon. We additionally measured elevation change with surface elevation tables (SETs). Mean sediment carbon stocks in the upper 30 cm of sediment within the restoration area (6.45 kg C/m2) were similar to those measured in the adjacent natural marsh (6.82 kg C/m2). However, mean elevation change, as measured by SETs, were substantially higher in the restoration area (3.10 cm/yr) than in the natural marsh sites (0.79 cm/yr). As a result, carbon accumulation rates were also higher in the restoration area (821 g C/m2/yr) compared to the natural marsh sites (195 g C/m2/yr).

Environmentally associated spatial changes of a macrozoobenthic community in the Saemangeum tidal flat, Korea

Science.gov (United States)

Ryu, Jongseong; Khim, Jong Seong; Choi, Jin-Woo; Shin, Hyun Chool; An, Soonmo; Park, Jinsoon; Kang, Daeseok; Lee, Chang-Hee; Koh, Chul-Hwan

2011-05-01

Estuarine tidal flats are both ecologically and economically important, hence developing methods to reliably measure ecosystem health is essential. Because benthic fauna play a central role in the food web of tidal flats, in this study we set out to quantitatively describe the intertidal zonation of macro-invertebrates and their associations with specific environmental parameters along three transects in the Saemangeum tidal flat, Korea. The abundance and biomass of intertidal fauna with respect to five environmental parameters (i.e., shore level, mud content, coarse sand content, water content, and organic content) were measured, to identify environmental factors that influence macrofaunal distribution in intertidal soft bottom habitats. A total of 75 species were identified, with dominant species showing distinct zones of distribution along all transects. The number of species recorded in each transect was found to be dependent on sediment characteristics and salinity. Cluster analysis classified the entire study area into three faunal assemblages (i.e., location groups), which were delineated by characteristic species, including (A) ' Periserrula-Macrophthalmus', (B) ' Umbonium-Meretrix', and (C) ' Prionospio-Potamocorbula'. Four environmental variables (i.e., shore level, water content, mud content, and organic content) appeared to determine factors that distinguished the three faunal assemblages, based on the discriminant analysis. The faunal assemblage types of the sampled locations were accurately predicted from environmental variables in two discriminant functions, with a prediction accuracy of 98%. It should be noted that the zonation of benthos in the lower section (C) of Sandong had been affected by the construction of a nearby dike, while this parameter had remained essentially unchanged at the other two location groups (A-B). Overall, the zonation of benthos from the Saemangeum tidal flat was explained adequately by the measured environmental variables

Salt Marsh Ecosystem Responses to Restored Tidal Connectivity across a 14y Chronosequence

Science.gov (United States)

Capooci, M.; Spivak, A. C.; Gosselin, K.

2016-02-01

Salt marshes support valuable ecosystem services. Yet, human activities negatively impact salt marsh function and contribute to their loss at a global scale. On Cape Cod, MA, culverts and impoundments under roads and railways restricted tidal exchange and resulted in salt marsh conversion to freshwater wetlands. Over the past 14 y, these structures have been removed or replaced, restoring tidal connectivity between marshes and a saltwater bay. We evaluated differences in plant community composition, sediment properties, and pore water chemistry in marshes where tidal connectivity was restored using a space-for-time, or chronosequence approach. Each restored marsh was paired with a nearby, natural salt marsh to control for variability between marshes. In each restored and natural salt marsh we evaluated the plant community by measuring species-specific percent cover and biomass and collected sediment cores for bulk density and pore water analyses. Plant communities responded rapidly: salt-tolerant species, such as Spartina alterniflora, became established while freshwater species, including Phragmites australis, were less abundant within 3 y of restoration. The number of plant species was generally greater in marshes restored within 10 y, compared to older and natural marshes. Sediment bulk density varied with depth and across sites. This likely reflects differences in site history and local conditions. Deeper horizons (24-30cm) generally had higher values in restored sites while surface values (0-3cm) were similar in restored and natural marshes. Porewater pH and sulfide were similar in restored and natural marshes, suggesting rapid microbial responses to seawater reintroduction. Overall, marsh properties and processes reflecting biological communities responded rapidly to tidal restoration. However, variability between study locations underscores the potential importance of site history, local hydrology, and geomorphology in shaping marsh biogeochemistry.

Impact of Oil on Bacterial Community Structure in Bioturbated Sediments

Science.gov (United States)

Stauffert, Magalie; Cravo-Laureau, Cristiana; Jézéquel, Ronan; Barantal, Sandra; Cuny, Philippe; Gilbert, Franck; Cagnon, Christine; Militon, Cécile; Amouroux, David; Mahdaoui, Fatima; Bouyssiere, Brice; Stora, Georges; Merlin, François-Xavier; Duran, Robert

2013-01-01

Oil spills threaten coastlines where biological processes supply essential ecosystem services. Therefore, it is crucial to understand how oil influences the microbial communities in sediments that play key roles in ecosystem functioning. Ecosystems such as sediments are characterized by intensive bioturbation due to burrowing macrofauna that may modify the microbial metabolisms. It is thus essential to consider the bioturbation when determining the impact of oil on microbial communities. In this study, an experimental laboratory device maintaining pristine collected mudflat sediments in microcosms closer to true environmental conditions – with tidal cycles and natural seawater – was used to simulate an oil spill under bioturbation conditions. Different conditions were applied to the microcosms including an addition of: standardized oil (Blend Arabian Light crude oil, 25.6 mg.g−1 wet sediment), the common burrowing organism Hediste (Nereis) diversicolor and both the oil and H. diversicolor. The addition of H. diversicolor and its associated bioturbation did not affect the removal of petroleum hydrocarbons. After 270 days, 60% of hydrocarbons had been removed in all microcosms irrespective of the H. diversicolor addition. However, 16S-rRNA gene and 16S-cDNA T-RFLP and RT-PCR-amplicon libraries analysis showed an effect of the condition on the bacterial community structure, composition, and dynamics, supported by PerMANOVA analysis. The 16S-cDNA libraries from microcosms where H. diversicolor was added (oiled and un-oiled) showed a marked dominance of sequences related to Gammaproteobacteria. However, in the oiled-library sequences associated to Deltaproteobacteria and Bacteroidetes were also highly represented. The 16S-cDNA libraries from oiled-microcosms (with and without H. diversicolor addition) revealed two distinct microbial communities characterized by different phylotypes associated to known hydrocarbonoclastic bacteria and dominated by

Impact of oil on bacterial community structure in bioturbated sediments.

Directory of Open Access Journals (Sweden)

Magalie Stauffert

Full Text Available Oil spills threaten coastlines where biological processes supply essential ecosystem services. Therefore, it is crucial to understand how oil influences the microbial communities in sediments that play key roles in ecosystem functioning. Ecosystems such as sediments are characterized by intensive bioturbation due to burrowing macrofauna that may modify the microbial metabolisms. It is thus essential to consider the bioturbation when determining the impact of oil on microbial communities. In this study, an experimental laboratory device maintaining pristine collected mudflat sediments in microcosms closer to true environmental conditions--with tidal cycles and natural seawater--was used to simulate an oil spill under bioturbation conditions. Different conditions were applied to the microcosms including an addition of: standardized oil (Blend Arabian Light crude oil, 25.6 mg.g⁻¹ wet sediment, the common burrowing organism Hediste (Nereis diversicolor and both the oil and H. diversicolor. The addition of H. diversicolor and its associated bioturbation did not affect the removal of petroleum hydrocarbons. After 270 days, 60% of hydrocarbons had been removed in all microcosms irrespective of the H. diversicolor addition. However, 16S-rRNA gene and 16S-cDNA T-RFLP and RT-PCR-amplicon libraries analysis showed an effect of the condition on the bacterial community structure, composition, and dynamics, supported by PerMANOVA analysis. The 16S-cDNA libraries from microcosms where H. diversicolor was added (oiled and un-oiled showed a marked dominance of sequences related to Gammaproteobacteria. However, in the oiled-library sequences associated to Deltaproteobacteria and Bacteroidetes were also highly represented. The 16S-cDNA libraries from oiled-microcosms (with and without H. diversicolor addition revealed two distinct microbial communities characterized by different phylotypes associated to known hydrocarbonoclastic bacteria and dominated by

Low-angle dunes in the Changjiang (Yangtze) Estuary: Flow and sediment dynamics under tidal influence

Science.gov (United States)

Hu, Hao; Wei, Taoyuan; Yang, Zhongyong; Hackney, Christopher R.; Parsons, Daniel R.

2018-05-01

It has long been highlighted that important feedbacks exist between river bed morphology, sediment transport and the turbulent flow field and that these feedbacks change in response to forcing mechanisms. However, our current understanding of bedform dynamics is largely based on studies of steady flow environments and cohesionless bed conditions. Few investigations have been made under rapidly changing flows. Here, we examine flow and sediment dynamics over low-angle dunes in unsteady flows in the Changjiang (Yangtze) Estuary, China. Topography, flow and sediment data were collected over a reach ca 1.8 km long through a semi-diurnal tidal cycle in a moderate tide of flood season. The results show that: (1) roughness length derived from the upper flow changes little with the flow reversing and displays the same value on both the ebb and flood tide. Moreover, the variability of individual bedform features plays an important role in roughness length variation. (2) Shear stress over the crest of low-angle dunes roughly represents the total spatially averaged stress over dunes in this study area, which has significant implications for advancing numerical models. (3) Changes in morphology, flow and sediment dynamics over dunes through time reveal how low-angle dunes evolve within a tidal cycle. (4) The clockwise hysteresis loops between flow dynamics and bedform features (height and aspect ratio) are also observed. The combination of suspended sediment transport and bedload transport on dune transformation and migration attributes to the clockwise hysteresis. The specific sediment composition of the riverbed, in some extent, affects the mechanism of sediment transport related to the exchange between suspended sediment and riverbed, but further investigation is needed to figure out the mechanism behind this for extended series of tides, such as spring/neap tide and tides in flooding and dry season.

Modelling lateral entrapment of suspended sediment in estuaries : The role of spatial lags in settling and M4 tidal flow

NARCIS (Netherlands)

Yang, Zhongyong; de Swart, Huib E.; Cheng, Heqin; Jiang, Chenjuan; Valle-Levinson, Arnoldo

2014-01-01

The effect of the joint action of M2 and M4 tidal flow, residual flow and spatial settling lag on the lateral entrapment of sediment is examined in tidally dominated estuaries with an idealized model that assumes along-estuary uniform conditions. Approximate solutions are obtained for arbitrary

Nekton community structure varies in response to coastal urbanization near mangrove tidal tributaries

Science.gov (United States)

Krebs, Justin M.; McIvor, Carole C.; Bell, Susan S.

2014-01-01

To assess the potential influence of coastal development on estuarine-habitat quality, we characterized land use and the intensity of land development surrounding small tidal tributaries in Tampa Bay. Based on this characterization, we classified tributaries as undeveloped, industrial, urban, or man-made (i.e., mosquito-control ditches). Over one third (37 %) of the tributaries have been heavily developed based on landscape development intensity (LDI) index values >5.0, while fewer than one third (28 %) remain relatively undeveloped (LDI < 3.0). We then examined the nekton community from 11 tributaries in watersheds representing the four defined land-use classes. Whereas mean nekton density was independent of land use, species richness and nekton-community structure were significantly different between urban and non-urban (i.e., undeveloped, industrial, man-made) tributaries. In urban creeks, the community was species-poor and dominated by high densities of poeciliid fishes, Poecilia latipinna and Gambusia holbrooki, while typically dominant estuarine taxa including Menidia spp., Fundulus grandis, and Adinia xenica were in low abundance and palaemonid grass shrimp were nearly absent. Densities of economically important taxa in urban creeks were only half that observed in five of the six undeveloped or industrial creeks, but were similar to those observed in mosquito ditches suggesting that habitat quality in urban and mosquito-ditch tributaries is suboptimal compared to undeveloped tidal creeks. Furthermore, five of nine common taxa were rarely collected in urban creeks. Our results suggest that urban development in coastal areas has the potential to alter the quality of habitat for nekton in small tidal tributaries as reflected by variation in the nekton community.

Annual sediment flux estimates in a tidal strait using surrogate measurements

Science.gov (United States)

Ganju, N.K.; Schoellhamer, D.H.

2006-01-01

Annual suspended-sediment flux estimates through Carquinez Strait (the seaward boundary of Suisun Bay, California) are provided based on surrogate measurements for advective, dispersive, and Stokes drift flux. The surrogates are landward watershed discharge, suspended-sediment concentration at one location in the Strait, and the longitudinal salinity gradient. The first two surrogates substitute for tidally averaged discharge and velocity-weighted suspended-sediment concentration in the Strait, thereby providing advective flux estimates, while Stokes drift is estimated with suspended-sediment concentration alone. Dispersive flux is estimated using the product of longitudinal salinity gradient and the root-mean-square value of velocity-weighted suspended-sediment concentration as an added surrogate variable. Cross-sectional measurements validated the use of surrogates during the monitoring period. During high freshwater flow advective and dispersive flux were in the seaward direction, while landward dispersive flux dominated and advective flux approached zero during low freshwater flow. Stokes drift flux was consistently in the landward direction. Wetter than average years led to net export from Suisun Bay, while dry years led to net sediment import. Relatively low watershed sediment fluxes to Suisun Bay contribute to net export during the wet season, while gravitational circulation in Carquinez Strait and higher suspended-sediment concentrations in San Pablo Bay (seaward end of Carquinez Strait) are responsible for the net import of sediment during the dry season. Annual predictions of suspended-sediment fluxes, using these methods, will allow for a sediment budget for Suisun Bay, which has implications for marsh restoration and nutrient/contaminant transport. These methods also provide a general framework for estimating sediment fluxes in estuarine environments, where temporal and spatial variability of transport are large. ?? 2006 Elsevier Ltd. All rights

Linking geology and microbiology: inactive pockmarks affect sediment microbial community structure.

Science.gov (United States)

Haverkamp, Thomas H A; Hammer, Øyvind; Jakobsen, Kjetill S

2014-01-01

Pockmarks are geological features that are found on the bottom of lakes and oceans all over the globe. Some are active, seeping oil or methane, while others are inactive. Active pockmarks are well studied since they harbor specialized microbial communities that proliferate on the seeping compounds. Such communities are not found in inactive pockmarks. Interestingly, inactive pockmarks are known to have different macrofaunal communities compared to the surrounding sediments. It is undetermined what the microbial composition of inactive pockmarks is and if it shows a similar pattern as the macrofauna. The Norwegian Oslofjord contains many inactive pockmarks and they are well suited to study the influence of these geological features on the microbial community in the sediment. Here we present a detailed analysis of the microbial communities found in three inactive pockmarks and two control samples at two core depth intervals. The communities were analyzed using high-throughput amplicon sequencing of the 16S rRNA V3 region. Microbial communities of surface pockmark sediments were indistinguishable from communities found in the surrounding seabed. In contrast, pockmark communities at 40 cm sediment depth had a significantly different community structure from normal sediments at the same depth. Statistical analysis of chemical variables indicated significant differences in the concentrations of total carbon and non-particulate organic carbon between 40 cm pockmarks and reference sample sediments. We discuss these results in comparison with the taxonomic classification of the OTUs identified in our samples. Our results indicate that microbial communities at the sediment surface are affected by the water column, while the deeper (40 cm) sediment communities are affected by local conditions within the sediment.

Linking geology and microbiology: inactive pockmarks affect sediment microbial community structure.

Directory of Open Access Journals (Sweden)

Thomas H A Haverkamp

Full Text Available Pockmarks are geological features that are found on the bottom of lakes and oceans all over the globe. Some are active, seeping oil or methane, while others are inactive. Active pockmarks are well studied since they harbor specialized microbial communities that proliferate on the seeping compounds. Such communities are not found in inactive pockmarks. Interestingly, inactive pockmarks are known to have different macrofaunal communities compared to the surrounding sediments. It is undetermined what the microbial composition of inactive pockmarks is and if it shows a similar pattern as the macrofauna. The Norwegian Oslofjord contains many inactive pockmarks and they are well suited to study the influence of these geological features on the microbial community in the sediment. Here we present a detailed analysis of the microbial communities found in three inactive pockmarks and two control samples at two core depth intervals. The communities were analyzed using high-throughput amplicon sequencing of the 16S rRNA V3 region. Microbial communities of surface pockmark sediments were indistinguishable from communities found in the surrounding seabed. In contrast, pockmark communities at 40 cm sediment depth had a significantly different community structure from normal sediments at the same depth. Statistical analysis of chemical variables indicated significant differences in the concentrations of total carbon and non-particulate organic carbon between 40 cm pockmarks and reference sample sediments. We discuss these results in comparison with the taxonomic classification of the OTUs identified in our samples. Our results indicate that microbial communities at the sediment surface are affected by the water column, while the deeper (40 cm sediment communities are affected by local conditions within the sediment.

Sediment transport and development of banner banks and sandwaves in an extreme tidal system: Upper Bay of Fundy, Canada

Science.gov (United States)

Li, Michael Z.; Shaw, John; Todd, Brian J.; Kostylev, Vladimir E.; Wu, Yongsheng

2014-07-01

Multibeam sonar mapping and geophysical and geological groundtruth surveys were coupled with tidal current and sediment transport model calculations to investigate the sediment transport and formation processes of the complex seabed features off the Cape Split headland in the upper Bay of Fundy. The Cape Split banner bank, composed of coarse to very coarse sand, is a southwest-northeast oriented, large tear-drop shaped sand body with superimposed sand waves that show wavelengths from 15 to 525 m and heights from 0.5 to 19 m. Isolated and chains of barchan dunes occur on top of a shadow bank to the southeast of the banner bank. The barchan dunes are composed of well-sorted medium sand and are oriented northwest-southeast. Their mean height and width are 1.5 and 55 m, respectively. A gravel bank, with an elongated elliptical shape and west-east orientation, lies in the Minas Passage erosional trough east of the headland to form the counterpart to the sandy Cape Split banner bank. The southern face is featureless but the northern face is covered by gravel megaripples. Tidal model predictions and sediment transport calculations show that the formation of the banner bank and the gravel bank are due to the development of the transient counter-clockwise and clockwise tidal eddies respectively to the west and east of the headland. The formation of barchan dunes is controlled by the nearly unidirectional flow regime in outer Scots Bay. Sand waves on the flanks of the Cape Split banner bank show opposite asymmetry and the barchan dunes are asymmetric to the northeast. The tidal current and sediment transport predictions corroborate bedform asymmetry to show that sand wave migration and net sediment transport is to southwest on the northern flank of the banner bank but to northeast on the southern bank. Long-term migration of the Scots Bay barchan dunes is to the northeast. Spring-condition tidal currents can cause frequent mobilization and high-stage transport over the

A one-dimensional biomorphodynamic model of tidal flats: Sediment sorting, marsh distribution, and carbon accumulation under sea level rise

Science.gov (United States)

Zhou, Zeng; Ye, Qinghua; Coco, Giovanni

2016-07-01

We develop a biomorphodynamic model to investigate sediment and vegetation dynamics on a schematic intertidal flat characterized by an initially well-mixed sand-mud mixture. Major interactions between tides, wind waves, salt marshes, sediment transport and sea level rise (SLR) are taken into account. For a bare flat under only tidal action, the model predicts a convex cross-shore profile with the surficial distribution of mud and sand on the upper and lower part of the intertidal flat, respectively. When wind waves are strong, the intertidal flat is highly eroded resulting in a concave profile near the high water mark. This behavior is pronouncedly altered when the intertidal flat is vegetated with the presence of salt marshes. Numerical results suggest that a considerable amount of mud can still remain in the vegetated region even when wave action is strong. A steeper transition zone forms at the boundary between salt marshes and bare flats because of the differential sediment deposition in the two neighboring regions. The inclusion of wind waves is found to considerably enhance the size of the marsh-edge transition zone. For the numerical experiments designed in this study, the profile shape and sediment sorting behavior of tidal flats are not significantly modified by a gradual rising sea level. However, the impacts of SLR on vegetated tidal flats are still manifold: (a) driving the landward migration of intertidal zone and salt marshes; (b) enhancing sediment erosion on intertidal flats; and (c) drowning salt marshes under limited sediment supply with the constrain of seawalls. Finally, model results suggest that organic carbon accumulation on marshlands may be enhanced with an increasing SLR rate provided that salt marshes are not drowned.

Tidal salt marshes of the southeast Atlantic Coast: A community profile

Energy Technology Data Exchange (ETDEWEB)

Wiegert, R.G.; Freeman, B.J.

1990-09-01

This report is part of a series of community profiles on the ecology of wetland and marine communities. This particular profile considers tidal marshes of the southeastern Atlantic coast, from North Carolina south to northern Florida. Alone among the earth's ecosystems, coastal communities are subjected to a bidirectional flooding sometimes occurring twice each day; this flooding affects successional development, species composition, stability, and productivity. In the tidally influenced salt marsh, salinity ranges from less than 1 ppt to that of seawater. Dominant plant species include cordgrasses (Spartina alterniflora and S. cynosuroides), black needlerush (Juncus romerianus), and salt marsh bulrush (Scirpus robustus). Both terrestrail and aquatic animals occur in salt marshes and include herons, egrets ospreys (Pandion haliaetus), bald eagles (Haliaeetus leucocephalus), alligators (Alligator Mississippiensis), manatees (Trichecus manatus), oysters, mussels, and fiddler crabs. Currently, the only significant direct commercial use of the tidal salt marshes is by crabbers seeking the blue crab Callinectes sapidus, but the marshes are quite important recreationally, aesthetically, and educationally. 151 refs., 45 figs., 6 tabs.

Sediment budgets, transport, and depositional trends in a large tidal delta

Science.gov (United States)

Morgan, Tara; Wright, Scott A.

2016-01-01

The Sacramento-San Joaquin Delta is the largest delta on the west coast of the United States. It is formed where the confluence of California’s two largest rivers (the Sacramento and San Joaquin) meet the ocean tides and has a significant physical gradient from fluvial to tidal. It is a semidiurnal system (two high and two low tides per day). Today, the Delta is one of the most manipulated in the United States. Once composed of many shallow, meandering and braided dendritic channels and dead-end sloughs and wetlands, it is now a network of leveed canals moving clear water around subsided islands. It historically has supported a biologically diverse tidal wetland complex, of which only 3% remains today (Whipple et al., 2012). It has also witnessed a collapse in the native fish populations. The Delta provides critical habitat for native species, however the hydrology and water quality are complicated by manipulations and diversions to satisfy multiple statewide objectives. Today water managers face co-equal goals of water supply to Californians and maintenance of ecosystem health and function. The Delta is a hub for both a multi-hundred-million dollar agricultural industry and a massive north-to-south water delivery system, supplying the primary source of freshwater to Central Valley farmers and drinking water for two-thirds of California’s population. Large pump facilities support the water demand and draw water from the Delta, further altering circulation patterns and redirecting the net flow toward the export facilities (Monsen et al., 2007). Fluvial sedimentation, along with organic accumulation, creates and sustains the Delta landscape. Hydraulic mining for gold in the watershed during the late 1800s delivered an especially large sediment pulse to the Delta. More recently, from 1955 to the present, a significant sediment decline has been observed that is thought to have been caused mostly by the construction of water storage reservoirs that trap the upstream

Sediment Transport and Infilling of a Borrow Pit on an Energetic Sandy Ebb Tidal Delta Offshore of Hilton Head Island, South Carolina

Science.gov (United States)

Wren, A.; Xu, K.; Ma, Y.; Sanger, D.; Van Dolah, R.

2014-12-01

Bottom-mounted instrumentation was deployed at two sites on an ebb tidal delta to measure hydrodynamics, sediment transport, and seabed elevation. One site ('borrow site') was 2 km offshore and used as a dredging site for beach nourishment of nearby Hilton Head Island in South Carolina, and the other site ('reference site') was 10 km offshore and not directly impacted by the dredging. In-situ time-series data were collected during two periods after the dredging: March 15 - June 12, 2012('spring') and August 18 - November 18, 2012 ('fall'). At the reference site directional wave spectra and upper water column current velocities were measured, as well as high-resolution current velocity profiles and suspended sediment concentration profiles in the Bottom Boundary Layer (BBL). Seabed elevation and small-scale seabed changes were also measured. At the borrow site seabed elevation and near-bed wave and current velocities were collected using an Acoustic Doppler Velocimeter. Throughout both deployments bottom wave orbital velocities ranged from 0 - 110 m/s at the reference site. Wave orbital velocities were much lower at the borrow site ranging from 10-20 cm/s, as wave energy was dissipated on the extensive and rough sand banks before reaching the borrow site. Suspended sediment concentrations increased throughout the BBL when orbital velocities increased to approximately 20 cm/s. Sediment grain size and critical shear stresses were similar at both sites, therefore, re-suspension due to waves was less frequent at the borrow site. However, sediment concentrations were highly correlated with the tidal cycle at both sites. Semidiurnal tidal currents were similar at the two sites, typically ranging from 0 - 50 cm/s in the BBL. Maximum currents exceeded the critical shear stress and measured suspended sediment concentrations increased during the first hours of the tidal cycle when the tide switched to flood tide. Results indicate waves contributed more to sediment mobility at

Environmental consequences of tidal power in a hyper-tidal muddy regime: the Severn estuary

International Nuclear Information System (INIS)

Kirby, R.

1997-01-01

Muddy hyper-tidal regimes, such as the Severn Estuary in the UK, are especially difficult for plants and animals. The difficulties stem from the semi-diurnal and semi-lunar energy fluctuations. On spring tides entrained fine sediment induces elevated suspended sediment concentrations such that photosynthesis is inhibited. On neap tides much of the entrained fine sediment is deposited on the sub-tidal bed over periods of several days to form ephemeral dense layers, which reach in excess of 100 G/l and rapidly become anaerobic on stagnation. Such occasional bed faunas as develop are characterised by very large numbers of immature individuals of a few species. One of the few organisms able to cope with the extreme conditions is the siliceous reef-building worn Sabellaria. Arising from the long term suppression in its calcareous fauna, erosion and winnowing of these Holocene clays fails to give rise to lag shell deposits, called chenier ridges, found elsewhere in eroding muddy inter-tidal systems. A tidal power barrage would shift the regime from hyper-tidal to macro-tidal decrease in turbidity would permit photosynthesis and phytoplankton growth, so stimulating the higher food chain. Ironically, perhaps, cleaning up the sewage discharges in the estuary, in the absence of barrage construction would lead to a wading bird crash whereas barrage construction would lead to an improved carrying capacity. (author)

Sedimentation rate and lateral migration of tidal channels in the Lagoon of Venice (Northern Italy)

Science.gov (United States)

Donnici, Sandra; Madricardo, Fantina; Serandrei-Barbero, Rossana

2017-11-01

Tidal channels are crucial for the functioning of highly valuable coastal environments, such as estuaries and lagoons. Their properties, however, are currently less understood than those of river systems. To elucidate their past behaviour, an extensive geophysical investigation was performed to reconstruct the evolution of channels and tidal surfaces in the central part of the Lagoon of Venice (Italy) over the past 5000 years. Comparing high-spatial-resolution acoustic data and sedimentary facies analyses of 41 cores, 29 of which were radiocarbon dated, revealed the sedimentation rates in different lagoonal environments and allowed the migration of two large meanders to be reconstructed. The average sedimentation rate of the study succession in the different sedimentary environments was 1.27 mm yr-1. The lateral migration rates were 13-23 m/century. This estimate is consistent with the lateral migration rates determined by comparing aerial photographs of recent channels. Comparing the buried channels with historical and current maps showed that, in general, the number of active channels is now reduced. Their morphology was sometimes simplified by artificial interventions. An understanding of the impact of the artificial interventions over time is useful for the management and conservation of tidal environments, particularly for the Lagoon of Venice, where management authorities are currently debating the possible deepening and rectification of large navigation channels.

Suspended sediment load in the tidal zone of an Indonesian river

Directory of Open Access Journals (Sweden)

F. A. Buschman

2012-11-01

Full Text Available Forest clearing for reasons of timber production, open pit mining and the establishment of oil palm plantations generally results in excessively high sediment loads in tropical rivers. The increasing sediment loads pose a threat to coastal marine ecosystems, such as coral reefs. This study presents observations of suspended sediment loads in the Berau River (Kalimantan, Indonesia, which debouches into a coastal ocean that is a preeminent center of coral diversity. The Berau River is relatively small and drains a mountainous, still relatively pristine basin that receives abundant rainfall. In the tidal zone of the Berau River, flow velocity was measured over a large part of the river width using a horizontal acoustic Doppler current profiler (HADCP. Surrogate measurements of suspended sediment concentration were taken with an optical backscatter sensor (OBS. Averaged over the 6.5 weeks covered by the benchmark survey period, the suspended sediment load was estimated at 2 Mt yr⁻¹. Based on rainfall-runoff modeling though, the river discharge peak during the survey was supposed to be moderate and the yearly averaged suspended sediment load is most likely somewhat higher than 2 Mt yr⁻¹. The consequences of ongoing clearing of rainforest were explored using a plot-scale erosion model. When rainforest, which still covered 50–60% of the basin in 2007, is converted to production land, soil loss is expected to increase with a factor between 10 and 100. If this soil loss is transported seaward as suspended sediment, the increase in suspended sediment load in the Berau River would impose a severe stress on this global hotspot of coral reef diversity.

Soft sediment deformation structures in the Maastrichtian Ajali Formation Western Flank of Anambra Basin, Southern Nigeria

Science.gov (United States)

Olabode, Solomon Ojo

2014-01-01

Soft sediment deformation structures were recognized in the Maastrichtian shallow marine wave to tide influenced regressive sediments of Ajali Formation in the western flank of Anambra basin, southern Nigerian. The soft sediment deformation structures were in association with cross bedded sands, clay and silt and show different morphological types. Two main types recognised are plastic deformations represented by different types of recumbent folds and injection structure represented by clastic dykes. Other structures in association with the plastic deformation structures include distorted convolute lamination, subsidence lobes, pillars, cusps and sand balls. These structures are interpreted to have been formed by liquefaction and fluidization mechanisms. The driving forces inferred include gravitational instabilities and hydraulic processes. Facies analysis, detailed morphologic study of the soft sediment deformation structures and previous tectonic history of the basin indicate that the main trigger agent for deformation is earthquake shock. The soft sediment deformation structures recognised in the western part of Anambra basin provide a continuous record of the tectonic processes that acted on the regressive Ajali Formation during the Maastrichtian.

The coupling of bay hydrodynamics with sediment supply and micro-tidal wetland stability under high rates of relative sea level rise

Science.gov (United States)

Wang, J.; Xu, K.; Restreppo, G. A.; Bentley, S. J.; Meng, X.; Zhang, X.

2017-12-01

Due to global sea level rise, local subsidence and sediment deficit, the Mississippi River (MR) deltaic plain has lost a total of 25% of coastal Louisiana's wetlands during the last century, leading to huge losses of ecological services, economic and social crises. Ecosystem-based restoration strategies which rely on coastal system processes and feedbacks are urgently needed. Understanding linkages between estuarine and coastal systems and the adjacent marshlands will help the designing strategies. To investigate bay hydrodynamics and its impacts on the adjacent micro-tidal wetland stability, hourly measurements of wave, tidal current, and benthic sediment concentration in summer, winter, and spring of 2015-2016 were conducted in Fourleague Bay, Louisiana, USA. The bay-marsh system has been stable for almost 80 years under high relative sea level rising rate, which is 11 km southeast of the Atchafalaya River mouth, with a water depth of 1-3 m. High-temporal resolution data indicate that benthic sediment resuspension is mainly caused by wind-driven waves with a dominant periodicity of 4.8 d. The sediment flux reaches 28 g·m-1·s-1 per unit depth in cm during the events. Net sediment transport is northwestward in summer, and southeastward in winter and spring. Sediment flux available for surrounding marsh varies from 0-500 g·m-1·s-1. An optimal inundation depth of 50 cm is estimated by the equilibrium wetland elevation change model under high relative sea level rising rate of 1.57 cm·yr-1. Seasonal variations of river discharge and wind direction (particularly speeds >3 m·s-1) greatly impact potential sediment contribution from bay to the surrounding wetlands. Three sediment transport regimes are concluded based on the seasonal variations of river discharge and wind direction: the `bypassing' season, the resuspension-accumulation season, and the combined `bypassing' and resuspension-accumulation season. The bay hydrodynamic processes and their impacts on the

Coupled penetrometer, MBES and ADCP assessments of tidal variations of the surface sediment layer along active subaqueous dunes, Danish Wadden Sea

DEFF Research Database (Denmark)

Stark, Nina; Hanff, Henrik; Svenson, Christian

2011-01-01

In-situ geotechnical measurements of surface sediments were carried out along large subaqueous dunes in the Knudedyb tidal inlet channel in the DanishWadden Sea using a small free-falling penetrometer. Vertical profiles showed a typical stratification pattern with a resolution of ~1 cm depicting...... a thin surface layer of low sediment strength and a stiffer substratum below (quasi-static bearing capacity equivalent: 1–3 kPa in the top layer, 20–140 kPa in the underlying sediment; thickness of the top layer ca. 5–8 cm). Observed variations in the thickness and strength of the surface layer during...... a tidal cycle were compared to mean current velocities (measured using an acoustic Doppler current profiler, ADCP), high-resolution bathymetry (based on multibeam echo sounding, MBES) and qualitative estimates of suspended sediment distributions in the water column (estimated from ADCP backscatter...

A new method for measuring bioturbation rates in sandy tidal flat sediments based on luminescence dating

DEFF Research Database (Denmark)

Madsen, Anni T.; Murray, Andrew S.; Jain, Mayank

2011-01-01

The rates of post-depositional mixing by bioturbation have been investigated using Optically Stimulated Luminescence (OSL) dating in two sediment cores (BAL2 and BAL5), retrieved from a sandy tidal flat in the Danish part of the Wadden Sea. A high-resolution chronology, consisting of thirty-six OSL...

Improving Sediment Transport Prediction by Assimilating Satellite Images in a Tidal Bay Model of Hong Kong

Directory of Open Access Journals (Sweden)

Peng Zhang

2014-03-01

Full Text Available Numerical models being one of the major tools for sediment dynamic studies in complex coastal waters are now benefitting from remote sensing images that are easily available for model inputs. The present study explored various methods of integrating remote sensing ocean color data into a numerical model to improve sediment transport prediction in a tide-dominated bay in Hong Kong, Deep Bay. Two sea surface sediment datasets delineated from satellite images from the Moderate Resolution Imaging Spectra-radiometer (MODIS were assimilated into a coastal ocean model of the bay for one tidal cycle. It was found that remote sensing sediment information enhanced the sediment transport model ability by validating the model results with in situ measurements. Model results showed that root mean square errors of forecast sediment both at the surface layer and the vertical layers from the model with satellite sediment assimilation are reduced by at least 36% over the model without assimilation.

Response of suspended sediment concentration to tidal dynamics at a site inside the mouth of an inlet: Jiaozhou Bay (China

Directory of Open Access Journals (Sweden)

S. L. Yang

2004-01-01

Full Text Available Observations of fair weather currents and suspended sediment concentrations (SSC were made using an acoustic Doppler current profiler and two YSI turbidity sensors over a neap to spring time cycle at a site near the inner mouth of a semi-enclosed mesotidal-macrotidal embayment (Jiaozhou Bay to examine the influence of tidal dynamics on concentration and transport of suspended sediment. During the investigation, SSC varied from about 3 to 16 mg L–1 at the surface and about 6 to 40 mg L–1 close to the bed, while the current velocity reached 79 cm s–1 at the surface and 61 cm s–1 near the bed. SSC was tidally cyclic. The near-bed instantaneous SSC was closely related to current velocity with almost no time lag, indicating that the variability of SSC was governed by current-induced settling/resuspension. At the surface, however, instantaneous SSC was poorly related to instantaneous current velocity because the peak SSC tended to occur around ebb slack water. This suggests that the surface SSC was controlled by horizontal advection from landward higher concentration areas. Both at the surface and near the bed, on the other hand, tidally-averaged SSC was well correlated to tidal range and current speed. Current velocity and SSC were flood-dominated for all the tides investigated, which resulted in significant landward residual suspended sediment transport at the study site. The observed flood dominance was mainly attributed to the location of the study site on the landward side of the bay’s inlet where flow separation is favoured during flood tide. It was concluded that tides are the dominant hydrodynamic component controlling the variability of SSC during fair weather at the study area. Keywords: sediment, concentration, suspension, advection, currents, shoalling effect, Jiaozhou Bay, China

Radiocaesium, plutonium and americium partitioning and solid speciation in sized, inter-tidal sediments from Strangford Lough

International Nuclear Information System (INIS)

Ledgerwood, F.K.; Larmour, R.A.; Mitchell, P.I.; Leon Vintro, L.; Ryan, R.W.

1999-01-01

Fine-grained surface (0-2 cm) sediment was collected at an inter-tidal site (Mahee Island) in Strangford Lough, on the NE coast of Ireland in September 1997. The sediment was wet-sieved into standard sized fractions using Endecott test sieves and the fractions assayed for 137 Cs, 239,240 Pu and 241 Am content. Sub-samples of each fraction were measured with a Malvern 2600 laser diffraction analyser, which confirmed that >90% of the particles in each fraction was in the defined size range

Widespread infilling of tidal channels and navigable waterways in human-modified tidal deltaplain of southwest Bangladesh

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Carol Wilson

2017-12-01

Full Text Available Since the 1960s, ~5000 km2 of tidal deltaplain in southwest Bangladesh has been embanked and converted to densely inhabited, agricultural islands (i.e., polders. This landscape is juxtaposed to the adjacent Sundarbans, a pristine mangrove forest, both well connected by a dense network of tidal channels that effectively convey water and sediment throughout the region. The extensive embanking in poldered areas, however, has greatly reduced the tidal prism (i.e., volume of water transported through local channels. We reveal that >600 km of these major waterways have infilled in recent decades, converting to land through enhanced sedimentation and the direct blocking of waterways by embankments and sluice gates. Nearly all of the observed closures (~98% have occurred along the embanked polder systems, with no comparable changes occurring in channels of the Sundarbans (<2% change. We attribute most of the channel infilling to the local reduction of tidal prism in poldered areas and the associated decline in current velocities. The infilled channels account for ~90 km2 of new land in the last 40–50 years, the rate of which, ~2 km2/yr, offsets the 4 km2/yr that is eroded at the coast, and is equivalent to ~20% of the new land produced naturally at the Ganges-Brahmaputra tidal rivermouth. Most of this new land, called ‘khas’ in Bengali, has been reclaimed for agriculture or aquaculture, contributing to the local economy. However, benefits are tempered by the loss of navigable waterways for commerce, transportation, and fishing, as well as the forced rerouting of tidal waters and sediments necessary to sustain this low-lying landscape against rising sea level. A more sustainable delta will require detailed knowledge of the consequences of these hydrodynamic changes to support more scientifically-grounded management of water, sediment, and tidal energy distribution.

Den ecology of Octopus vulgaris Cuvier, 1797, on soft sediment: availability and types of shelter

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Stelios Katsanevakis

2004-03-01

Full Text Available To avoid predation, octopuses select and actively modify shelters (also called dens in the substratum, where they remain most of the time, especially during daylight hours. The main questions that this study deals with are: Is den availability a significant constraint for the distribution of Octopus vulgaris on soft sediment? What kind of dens does O. vulgaris use on soft sediment and what factors affect the selection of one type instead of another? With population density measurements by SCUBA diving and enrichment experiments with artificial dens, we concluded that the availability of solid materials necessary for den construction is a limiting factor for the distribution of O. vulgaris on soft sediment. O. vulgaris used four different types of den on soft sediment: well (a vertical hole in the sediment, rock/stone (the octopus uses a rock or a large stone to dig a cavity under it, shell (an empty shell is used, human origin (a solid material of human origin is used. The relative proportion of the four types of den in the areas studied was: 38.7% human origin, 29.7% well, 21.5% rock/stone, 2.9% shell. Also, 7.3% of the octopuses were found outside their den. The main types of den were found in different relative proportions in relation to the depth, the distance from shore, the octopus size and the granulometry of the sediment.

Evaluation of soft sediment deformation structures along the Fethiye ...

Indian Academy of Sciences (India)

Burdur city is located on lacustrine sedimentary deposits at the northeastern end of the Fethiye–Burdur Fault Zone (FBFZ) in SW Turkey. Fault steps were formed in response to vertical displacement along normal fault zones in these deposits. Soft sediment deformation structures were identified at five sitesin lacustrine ...

On the sedimentation problems in water abstraction channels at power plant sites at tidal estuaries

International Nuclear Information System (INIS)

Jensen, J.; Arns, A.; Frank, T.; Meiswinkel, R.; Richei, A.

2010-01-01

The required cooling water supply of a nuclear power plant the required flow deepness in the water abstraction channels has to be provided. Since the abstraction channels are usually in main stream orientation of the river periodic sedimentation occur, that have to be removed by dredging techniques. Especially in tidal estuaries the complex flow situation induces transport mechanisms that have to be studied in order to develop cost saving and effective measures and procedures to reduce the sedimentation and pollutants deposition. The authors recommend experimental determinations of the sold material transport and numerical hydrodynamic transport modeling to identify the transport pathways.

Storm surges and climate change implications for tidal marshes: Insight from the San Francisco Bay Estuary, California, USA

Science.gov (United States)

Thorne, Karen M.; Buffington, Kevin J.; Swanson, Kathleen; Takekawa, John Y.

2013-01-01

Tidal marshes are dynamic ecosystems, which are influenced by oceanic and freshwater processes and daily changes in sea level. Projected sea-level rise and changes in storm frequency and intensity will affect tidal marshes by altering suspended sediment supply, plant communities, and the inundation duration and depth of the marsh platform. The objective of this research was to evaluate if regional weather conditions resulting in low-pressure storms changed tidal conditions locally within three tidal marshes. We hypothesized that regional storms will increase sea level heights locally, resulting in increased inundation of the tidal marsh platform and plant communities. Using site-level measurements of elevation, plant communities, and water levels, we present results from two storm events in 2010 and 2011 from the San Francisco Bay Estuary (SFBE), California, USA. The January 2010 storm had the lowest recorded sea level pressure in the last 30 years for this region. During the storm episodes, the duration of tidal marsh inundation was 1.8 and 3.1 times greater than average for that time of year, respectively. At peak storm surges, over 65% in 2010 and 93% in 2011 of the plant community was under water. We also discuss the implications of these types of storms and projected sea-level rise on the structure and function of the tidal marshes and how that will impact the hydro-geomorphic processes and marsh biotic communities.

Enceladus's crust as a non-uniform thin shell: I tidal deformations

Science.gov (United States)

Beuthe, Mikael

2018-03-01

The geologic activity at Enceladus's south pole remains unexplained, though tidal deformations are probably the ultimate cause. Recent gravity and libration data indicate that Enceladus's icy crust floats on a global ocean, is rather thin, and has a strongly non-uniform thickness. Tidal effects are enhanced by crustal thinning at the south pole, so that realistic models of tidal tectonics and dissipation should take into account the lateral variations of shell structure. I construct here the theory of non-uniform viscoelastic thin shells, allowing for depth-dependent rheology and large lateral variations of shell thickness and rheology. Coupling to tides yields two 2D linear partial differential equations of the fourth order on the sphere which take into account self-gravity, density stratification below the shell, and core viscoelasticity. If the shell is laterally uniform, the solution agrees with analytical formulas for tidal Love numbers; errors on displacements and stresses are less than 5% and 15%, respectively, if the thickness is less than 10% of the radius. If the shell is non-uniform, the tidal thin shell equations are solved as a system of coupled linear equations in a spherical harmonic basis. Compared to finite element models, thin shell predictions are similar for the deformations due to Enceladus's pressurized ocean, but differ for the tides of Ganymede. If Enceladus's shell is conductive with isostatic thickness variations, surface stresses are approximately inversely proportional to the local shell thickness. The radial tide is only moderately enhanced at the south pole. The combination of crustal thinning and convection below the poles can amplify south polar stresses by a factor of 10, but it cannot explain the apparent time lag between the maximum plume brightness and the opening of tiger stripes. In a second paper, I will study the impact of a non-uniform crust on tidal dissipation.

Early invasion population structure of quagga mussel and associated benthic invertebrate community composition on soft sediment in a large reservoir

Science.gov (United States)

Wittmann, Marion E.; Chandra, Sudeep; Caires, Andrea; Denton, Marianne; Rosen, Michael R.; Wong, Wai Hing; Teitjen, Todd; Turner, Kent; Roefer, Peggy; Holdren, G. Chris

2010-01-01

In 2007 an invasive dreissenid mussel species, Dreissena bugensis (quagga mussel), was discovered in Lake Mead reservoir (AZ–NV). Within 2 years, adult populations have spread throughout the lake and are not only colonizing hard substrates, but also establishing in soft sediments at depths ranging from 1 to >100 m. Dreissena bugensis size class and population density distribution differs between basins; cluster analysis revealed 5 adult cohorts within Boulder Basin and Overton Arm but low densities and low cohort survival in the Las Vegas Basin. Regression analysis suggests depth and temperature are not primary controllers of D. bugensis density in Lake Mead, indicating other factors such as sediment type, food availability or other resource competition may be important. Monthly veliger tows showed at least 2 major spawning events per year, with continuous presence of veligers in the water column. Adult mussels have been found in spawn or post-spawn condition in soft sediments in shallow to deep waters (>80 m) indicating the potential for reproduction at multiple depths. Comparisons to a 1986 benthic survey suggest there have been shifts in nondreissenid macroinvertebrate composition; however, it is unclear if this is due to D. bugensis presence. Current distribution of nondreissenid macroinvertebrates is heterogeneous in all 3 basins, and their biodiversity decreased when D. bugensis density was 2500/m2 or greater.

The effects of tidal range on saltmarsh morphology

Science.gov (United States)

Goodwin, Guillaume; Mudd, Simon

2017-04-01

Saltmarshes are highly productive coastal ecosystems that act simultaneously as flood barriers, carbon storage, pollutant filters and nurseries. As halophytic plants trap suspended sediment and decay in the settled strata, innervated platforms emerge from the neighbouring tidal flats, forming sub-vertical scarps on their eroding borders and sub-horizontal pioneer zones in areas of seasonal expansion. These evolutions are subject to two contrasting influences: stochastically generated waves erode scarps and scour tidal flats, whereas tidally-generated currents transport sediment to and from the marsh through the channel network. Hence, the relative power of waves and tidal currents strongly influences saltmarsh evolution, and regional variations in tidal range yield marshes of differing morphologies. We analyse several sheltered saltmarshes to determine how their morphology reflects variations in tidal forcing. Using tidal, topographic and spectral data, we implement an algorithm based on the open-source software LSDTopoTools to automatically identify features such as marsh platforms, tidal flats, erosion scarps, pioneer zones and tidal channels on local Digital Elevation Models. Normalised geometric properties are then computed and compared throughout the spectrum of tidal range, highlighting a notable effect on channel networks, platform geometry and wave exposure. We observe that micro-tidal marshes typically display jagged outlines and multiple islands along with wide, shallow channels. As tidal range increases, we note the progressive disappearance of marsh islands and linearization of scarps, both indicative of higher hydrodynamic stress, along with a structuration of channel networks and the increase of levee volume, suggesting higher sediment input on the platform. Future research will lead to observing and modelling the evolution of saltmarshes under various tidal forcing in order to assess their resilience to environmental change.

Source and dispersal of suspended sediment in the macro-tidal Gulf of Kachchh

Digital Repository Service at National Institute of Oceanography (India)

Ramaswamy, V.; Nath, B.N.; Vethamony, P.; Ilangovan, D.

and transport of carbon, minerals and pollutants to the oceans (Eisma, 1981; McKee, 2003). Macro-tidal areas are usually associated with high SSC because of higher energy conditions with sediments getting resuspended and transported depending on the harmonics... International 104, 69–86. Chandrasekharam, D., Mahoney, J.J., Sheth, H.C., Duncan, R.A., 1999. Elemental and Nd–Sr–Pb isotope geochemistry of flows and dikes from the Tapi rift, Deccan flood basalt province. India Journal of Volcanology and Geothermal Research...

Seismically-triggered soft-sediment deformation structures close to a major strike-slip fault system in the Eastern Alps (Hirlatz cave, Austria)

Science.gov (United States)

Salomon, Martina Lan; Grasemann, Bernhard; Plan, Lukas; Gier, Susanne; Schöpfer, Martin P. J.

2018-05-01

We investigate episodic soft-sediment deformation structures cross-cut by normal faults preserved in unlithified finely laminated calcite rich sediments in the Hirlatz cave in the Northern Calcareous Alps (Austria). These sediments comprise varve-like alternations of brighter carbonate/quartz rich layers, and darker clay mineral rich layers. The deformed sediments contain abundant millimeter to centimeter-scale soft-sediment structures (load casts, ball-and-pillow structures), sheet slumps (thrust faults and folds), erosive channels filled with slides and chaotic slumps. After deposition and soft-sediment deformation normal faults developed within the entire sedimentary succession, an event that probably correlates with an offset of c. 10 cm of the passage wall above the outcrop. Our major conclusions are: (i) The sediments have a glacial origin and were deposited in the Hirlatz cave under phreatic fluvio-lacustrine conditions. The deposition and the soft-sediment deformation occurred most likely during the last glaciation (i.e. around 25 ka ago); (ii) The liquefaction and formation of the soft-sediment structures in water-saturated stratified layers was triggered by episodic seismic events; (iii) The internally deformed sediments were later displaced by normal faults; (iv) A possible source for the seismic events is the active sinistral Salzach-Ennstal-Mariazeller-Puchberger (SEMP) strike-slip fault which is located about 10 km south of the outcrop and plays a major role in accommodating the extrusion of the Eastern Alps towards the Pannonian Basin. To our knowledge, the described structures are the first report of liquefaction and seismically induced soft-sediment deformations in Quaternary sediments in the Eastern Alps.

Analysis of gaming community using Soft System Methodology

OpenAIRE

Hurych, Jan

2015-01-01

This diploma thesis aims to analyse virtual gaming community and it's problems in case of community belonging to EU server of the game called World of Tanks. To solve these problems, Soft System Methodology by P. Checkland, is used. The thesis includes analysis of significance of gaming communities for the gaming industry as a whole. Gaming community is then defined as a soft system. There are 3 problems analysed in the practical part of the thesis using newer version of SSM. One iteration of...

Fine sediment transport into the hyperturbid lower Ems River : The role of channel deepening and sediment-induced drag reduction

NARCIS (Netherlands)

Van Maren, D.S.; Winterwerp, J.C.; Vroom, J.

2015-01-01

Deepening of estuarine tidal channels often leads to tidal amplification and increasing fine sediment import. Increasing fine sediment import, in turn, may lower the hydraulic drag (due to a smoother muddy bed and/or sediment-induced damping of turbulence), and therefore, further strengthen tidal

Size structure of marine soft-bottom macrobenthic communities across natural habitat gradients: implications for productivity and ecosystem function.

Directory of Open Access Journals (Sweden)

Tara A Macdonald

Full Text Available Size distributions of biotic assemblages are important modifiers of productivity and function in marine sediments. We investigated the distribution of proportional organic biomass among logarithmic size classes (2(-6J to 2(16J in the soft-bottom macrofaunal communities of the Strait of Georgia, Salish Sea on the west coast of Canada. The study examines how size structure is influenced by 3 fundamental habitat descriptors: depth, sediment percent fines, and organic flux (modified by quality. These habitat variables are uncorrelated in this hydrographically diverse area, thus we examine their effects in combination and separately. Cluster analyses and cumulative biomass size spectra reveal clear and significant responses to each separate habitat variable. When combined, habitat factors result in three distinct assemblages: (1 communities with a high proportion of biomass in small organisms, typical of shallow areas (3 g C/m(2/yr/δ(15N from the Fraser River; and (3 communities with biomass dominated by moderately large organisms, but lacking the smallest and largest size classes, typical of deep, fine sediments experiencing low modified organic flux (<3.0 gC/m(2/yr/δ(15N. The remaining assemblages had intermediate habitat types and size structures. Sediment percent fines and flux appear to elicit threshold responses in size structure, whereas depth has the most linear influence on community size structure. The ecological implications of size structure in the Strait of Georgia relative to environmental conditions, secondary production and sediment bioturbation are discussed.

Population ecology and community structure of sub-tidal soft sediment dwelling macro-invertebrates of Konkan, west coast of India

Digital Repository Service at National Institute of Oceanography (India)

Vizakat, L.; Harkantra, S.N.; Parulekar, A.H.

(Shannon Wiener index) varied from 0.44 to 3.58 (X = 1.94, SD = + or - 0.89). Population and community structure were more stable in premonsoon months. Carnivorous species Glycera alba modified the community structure mainly due to prey...

Massive sediment bypassing on the lower shoreface offshore of a wide tidal inlet: Cat Island Pass, Louisiana

Science.gov (United States)

Jaffe, B.E.; List, J.H.; Sallenger, A.H.

1997-01-01

Analysis of a series of historical bathymetric and shoreline surveys along the Louisiana coast west of the Mississippi River mouth detected a large area of deposition in water depths of 2.0–8.5 m offshore of a 9-km-wide tidal inlet, the Cat Island Pass/Wine Island Pass system. A 59.9 · 106 m3 sandy deposit formed from the 1930s–1980s, spanning 27 km in the alongshore direction, delineating the transport pathway for sediment bypassing offshore of the inlet on the shoreface. Bypassing connected the shorefaces of two barrier island systems, the Isles Dernieres and the Bayou Lafourche.The processes responsible for formation of this deposit are not well understood, but sediment-transport modeling suggests that sediment is transported primarily by wind-driven coastal currents during large storms and hurricanes. Deposition appears to be related to changes in shoreline orientation, closing of transport pathways into a large bay to the east and the presence of tidal inlets. This newly documented type of bypassing, an offshore bypassing of the inlet system, naturally nourished the immediate downdrift area, the eastern Isles Dernieres, where shoreface and shoreline erosion rates are about half of pre-bypassing rates. Erosion rates remained the same farther downdrift, where bypassing has not yet reached. As this offshore bypassing continues, the destruction of the Isles Dernieres will be slowed.

Metal-macrofauna interactions determine microbial community structure and function in copper contaminated sediments.

Science.gov (United States)

Mayor, Daniel J; Gray, Nia B; Elver-Evans, Joanna; Midwood, Andrew J; Thornton, Barry

2013-01-01

Copper is essential for healthy cellular functioning, but this heavy metal quickly becomes toxic when supply exceeds demand. Marine sediments receive widespread and increasing levels of copper contamination from antifouling paints owing to the 2008 global ban of organotin-based products. The toxicity of copper will increase in the coming years as seawater pH decreases and temperature increases. We used a factorial mesocosm experiment to investigate how increasing sediment copper concentrations and the presence of a cosmopolitan bioturbating amphipod, Corophium volutator, affected a range of ecosystem functions in a soft sediment microbial community. The effects of copper on benthic nutrient release, bacterial biomass, microbial community structure and the isotopic composition of individual microbial membrane [phospholipid] fatty acids (PLFAs) all differed in the presence of C. volutator. Our data consistently demonstrate that copper contamination of global waterways will have pervasive effects on the metabolic functioning of benthic communities that cannot be predicted from copper concentrations alone; impacts will depend upon the resident macrofauna and their capacity for bioturbation. This finding poses a major challenge for those attempting to manage the impacts of copper contamination on ecosystem services, e.g. carbon and nutrient cycling, across different habitats. Our work also highlights the paucity of information on the processes that result in isotopic fractionation in natural marine microbial communities. We conclude that the assimilative capacity of benthic microbes will become progressively impaired as copper concentrations increase. These effects will, to an extent, be mitigated by the presence of bioturbating animals and possibly other processes that increase the influx of oxygenated seawater into the sediments. Our findings support the move towards an ecosystem approach for environmental management.

Metal-macrofauna interactions determine microbial community structure and function in copper contaminated sediments.

Directory of Open Access Journals (Sweden)

Daniel J Mayor

Full Text Available Copper is essential for healthy cellular functioning, but this heavy metal quickly becomes toxic when supply exceeds demand. Marine sediments receive widespread and increasing levels of copper contamination from antifouling paints owing to the 2008 global ban of organotin-based products. The toxicity of copper will increase in the coming years as seawater pH decreases and temperature increases. We used a factorial mesocosm experiment to investigate how increasing sediment copper concentrations and the presence of a cosmopolitan bioturbating amphipod, Corophium volutator, affected a range of ecosystem functions in a soft sediment microbial community. The effects of copper on benthic nutrient release, bacterial biomass, microbial community structure and the isotopic composition of individual microbial membrane [phospholipid] fatty acids (PLFAs all differed in the presence of C. volutator. Our data consistently demonstrate that copper contamination of global waterways will have pervasive effects on the metabolic functioning of benthic communities that cannot be predicted from copper concentrations alone; impacts will depend upon the resident macrofauna and their capacity for bioturbation. This finding poses a major challenge for those attempting to manage the impacts of copper contamination on ecosystem services, e.g. carbon and nutrient cycling, across different habitats. Our work also highlights the paucity of information on the processes that result in isotopic fractionation in natural marine microbial communities. We conclude that the assimilative capacity of benthic microbes will become progressively impaired as copper concentrations increase. These effects will, to an extent, be mitigated by the presence of bioturbating animals and possibly other processes that increase the influx of oxygenated seawater into the sediments. Our findings support the move towards an ecosystem approach for environmental management.

Modelling the dispersion of non-conservative radionuclides in tidal waters. Pt. 1: Conceptual and mathematical model

International Nuclear Information System (INIS)

Perianez, R.; Abril, J.M.; Garcia-Leon, M.

1996-01-01

A 2D four-phase model to study the dispersion of non-conservative radionuclides in tidal waters, in conditions of disequilibrium for ionic exchanges, has been developed. At disequilibrium conditions, ionic exchanges cannot be formulated using distribution coefficients k d . Thus, kinetic transfer coefficients have been used. The model includes ionic exchanges among water and the solid phases (suspended matter and two grain size fractions of sediments), the deposition and resuspension of suspended matter and advective plus diffusive transport. In the second part of this work, which is presented in a separate paper, the model is applied to simulate 226 Ra dispersion, discharged from a fertilizer processing plant, in an estuarine system in the south-west of Spain. (Author)

Tidal River Management (TRM and Tidal Basin Management (TBM: A case study on Bangladesh

Directory of Open Access Journals (Sweden)

Talchabhadel Rocky

2016-01-01

Full Text Available Bangladesh is the biggest delta of the world. Construction of numbers of polders is one of the flood resilient approach. But the presence of coastal polders de-linked the flood plain. The siltation in river causes riverbeds to become higher than the adjacent crop lands, and vast area under the polders became permanently water logged rendering large tract of land uncultivable. The current practice is temporarily de-poldering by cutting embankment. This is a natural water management process with very little human interventions but it needs strong participation and consensus with a great deal of sacrifice by the stakeholders for a specific period (3 to 5 years or even more[1]. An attempt has been made to study the phenomena of tidal basin management reviewing some secondary data and processes involved in successfully operated tidal basins of Bangladesh. And preliminary laboratory experiments are carried out to precisely look into the suspended sediment transport. With varying outflow discharge and sediment supply, the transport processes are investigated. 3D sediment transport model developed using openFOAM has good agreement with experimental result and can be used to better understand effectiveness of tidal basin management.

Remediation of muddy tidal flat sediments using hot air-dried crushed oyster shells.

Science.gov (United States)

Yamamoto, Tamiji; Kondo, Shunsuke; Kim, Kyung-Hoi; Asaoka, Satoshi; Yamamoto, Hironori; Tokuoka, Makoto; Hibino, Tadashi

2012-11-01

In order to prove that hot air-dried crushed oyster shells (HACOS) are effective in reducing hydrogen sulfide in muddy tidal flat sediments and increasing the biomass, field experiments were carried out. The concentration of hydrogen sulfide in the interstitial water, which was 16 mg SL(-1) before the application of HACOS, decreased sharply and maintained almost zero in the experimental sites (HACOS application sites) for one year, whereas it was remained at ca. 5 mg SL(-1) in the control sites. The number of macrobenthos individuals increased to 2-4.5 times higher than that in the control site. Using a simple numerical model, the effective periods for suppression of hydrogen sulfide were estimated to be 3.2-7.6 and 6.4-15.2 years for the experimental sites with 4 and 8 tons per 10 × 10 × 0.2m area, respectively. From these results, it is concluded that HACOS is an effective material to remediate muddy tidal flats. Copyright © 2012 Elsevier Ltd. All rights reserved.

Estimation of soft sediment thickness in Kuala Lumpur based on microtremor observation data

Science.gov (United States)

Chiew, Chang Chyau; Cheah, Yi Ben; Tan, Chin Guan; Lau, Tze Liang

2017-10-01

Seismic site effect is one of the major concerns in earthquake engineering. Soft ground tends to amplify the seismic wave in surficial geological layers. The determination of soft ground thickness on the surface layers of the earth is an important input for seismic hazard assessment. This paper presents an easy and convenient approach to estimate the soft sediment thickness at the site using microtremor observation technique. A total number of 133 survey points were conducted in selected sites around Kuala Lumpur area using a microtremor measuring instrument, but only 103 survey points contributed to the seismic microzonation and sediment thickness plots. The bedrock of Kuala Lumpur area is formed by Kenny Hill Formation, limestone, granite, and the Hawthornden Schist; however, the thickness of surface soft ground formed by alluvial deposits, mine tailings, and residual soils remains unknown. Hence, the predominant frequency of the ground in each site was determined based on Nakamura method. A total number of 14 sites with known depth to bedrock from the supply of geotechnical reports in the study area were determined. An empirical correlation was developed to relate the ground predominant frequency and soft ground thickness. This correlation may contribute to local soil underlying the subsurface of Kuala Lumpur area. The finding provides an important relationship for engineers to estimate the soft ground thickness in Kuala Lumpur area based on the dynamic characteristics of the ground measured from microtremor observation.

Modeling tidal marsh distribution with sea-level rise: evaluating the role of vegetation, sediment, and upland habitat in marsh resiliency.

Science.gov (United States)

Schile, Lisa M; Callaway, John C; Morris, James T; Stralberg, Diana; Parker, V Thomas; Kelly, Maggi

2014-01-01

Tidal marshes maintain elevation relative to sea level through accumulation of mineral and organic matter, yet this dynamic accumulation feedback mechanism has not been modeled widely in the context of accelerated sea-level rise. Uncertainties exist about tidal marsh resiliency to accelerated sea-level rise, reduced sediment supply, reduced plant productivity under increased inundation, and limited upland habitat for marsh migration. We examined marsh resiliency under these uncertainties using the Marsh Equilibrium Model, a mechanistic, elevation-based soil cohort model, using a rich data set of plant productivity and physical properties from sites across the estuarine salinity gradient. Four tidal marshes were chosen along this gradient: two islands and two with adjacent uplands. Varying century sea-level rise (52, 100, 165, 180 cm) and suspended sediment concentrations (100%, 50%, and 25% of current concentrations), we simulated marsh accretion across vegetated elevations for 100 years, applying the results to high spatial resolution digital elevation models to quantify potential changes in marsh distributions. At low rates of sea-level rise and mid-high sediment concentrations, all marshes maintained vegetated elevations indicative of mid/high marsh habitat. With century sea-level rise at 100 and 165 cm, marshes shifted to low marsh elevations; mid/high marsh elevations were found only in former uplands. At the highest century sea-level rise and lowest sediment concentrations, the island marshes became dominated by mudflat elevations. Under the same sediment concentrations, low salinity brackish marshes containing highly productive vegetation had slower elevation loss compared to more saline sites with lower productivity. A similar trend was documented when comparing against a marsh accretion model that did not model vegetation feedbacks. Elevation predictions using the Marsh Equilibrium Model highlight the importance of including vegetation responses to sea

Sedimentary Facies Mapping Based on Tidal Channel Network and Topographic Features

Science.gov (United States)

Ryu, J. H.; Lee, Y. K.; Kim, K.; Kim, B.

2015-12-01

Tidal flats on the west coast of Korea suffer intensive changes in their surface sedimentary facies as a result of the influence of natural and artificial changes. Spatial relationships between surface sedimentary facies distribution and benthic environments were estimated for the open-type Ganghwa tidal flat and semi closed-type Hwangdo tidal flat, Korea. In this study, we standardized the surface sedimentary facies and tidal channel index of the channel density, distance, thickness and order. To extract tidal channel information, we used remotely sensed data, such as those from the Korea Multi-Purpose Satellite (KOMPSAT)-2, KOMPSAT-3, and aerial photographs. Surface sedimentary facies maps were generated based on field data using an interpolation method.The tidal channels in each sediment facies had relatively constant meandering patterns, but the density and complexity were distinguishable. The second fractal dimension was 1.7-1.8 in the mud flat, about 1.4 in the mixed flat, and about 1.3 in the sand flat. The channel density was 0.03-0.06 m/m2 in the mud flat and less than 0.02 m/m2 in the mixed and sand flat areas of the two test areas. Low values of the tidal channel index, which indicated a simple pattern of tidal channel distribution, were identified at areas having low elevation and coarse-grained sediments. By contrast, high values of the tidal channel index, which indicated a dendritic pattern of tidal channel distribution, were identified at areas having high elevation and fine-grained sediments. Surface sediment classification based on remotely sensed data must circumspectly consider an effective critical grain size, water content, local topography, and intertidal structures.

Sedimentary fabrics of the macrotidal, mud-dominated, inner estuary to fluvio-tidal transition zone, Petitcodiac River estuary, New Brunswick, Canada

Science.gov (United States)

Shchepetkina, Alina; Gingras, Murray K.; Zonneveld, John-Paul; Pemberton, S. George

2016-03-01

The study provides a detailed description of mud-dominated sedimentary fabrics and their application for the rock record within the inner estuary to the fluvial zone of the Petitcodiac River estuary, New Brunswick, Canada. Sedimentological characteristics and facies distributions of the clay- and silt-rich deposits are reported. The inner estuary is characterized by thick accumulations of interbedded silt and silty clay on intertidal banks that flank the tidally influenced channel. The most common sedimentary structures observed are parallel and wavy lamination, small-scale soft-sediment deformation with microfaults, and clay and silt current ripples. The tidal channel contains sandy silt and clayey silt with planar lamination, massive and convolute bedding. The fluvio-tidal transition zone is represented by interbedded trough cross-stratified sand and gravel beds with planar laminated to massive silty mud. The riverine, non-tidal reach of the estuary is characterized by massive, planar tabular and trough cross-stratified gravel-bed deposits. The absence of bioturbation within the inner estuary to the fluvio-tidal transition zone can be explained by the following factors: low water salinities (0-5 ppt), amplified tide and current speeds, and high concentrations of flocculated material in the water body. Notably, downstream in the middle and outer estuary, bioturbation is seasonally pervasive: in those locales the sedimentary conditions are similar, but salinity is higher. In this study, the sedimentological (i.e., grain size, bedding characters, sedimentary structures) differences between the tidal estuary and the fluvial setting are substantial, and those changes occur over only a few hundred meters. This suggests that the widely used concept of an extensive fluvio-tidal transition zone and its depositional character may not be a geographically significant component of fluvial or estuary deposits, which can go unnoticed in the study of the ancient rocks.

Subtidal soft-bottom macroinvertebrate communities of the Canary Islands. An ecological approach

OpenAIRE

Monterroso,Oscar; Riera,Rodrigo; Núñez,Jorge

2012-01-01

The Canarian archipelago is characterized by a mosaic of soft-bottoms such as Cymodocea nodosa meadows, Caulerpa spp. meadows, mäerl bottoms, sabellid fields and bare sandy seabeds, including various macroinfaunal communities. Vegetated habitats (e.g. Cymodocea and Caulerpa) maintain more diverse communities than the non-vegetated seabeds. The results indicated that Caulerpa meadows and, to a lesser extent, Cymodocea nodosa and sabellid fields are the richest and most diverse ecosystems in th...

Nematode communities in contaminated river sediments

International Nuclear Information System (INIS)

Heininger, Peter; Hoess, Sebastian; Claus, Evelyn; Pelzer, Juergen; Traunspurger, Walter

2007-01-01

Nematode communities of eight sites from three river catchments were investigated in terms of the genera composition, feeding types, and life-history strategists. The sampling sites showed a gradient of anthropogenic contamination with heavy metals and organic pollutants being important factors in differentiating the sites. Nematode community structure was related to sediment pollution and the hydro-morphological structure of the sampling sites. Heavily contaminated sites were characterized by communities with high relative abundances of omnivorous and predacious nematodes (Tobrilus, c-p 3; Mononchus, c-p 4), while sites with low to medium contamination were dominated by bacterivorous nematodes (Monhystera, Daptonema; c-p 2) or suction feeders (Dorylaimus, c-p 4). The relatively high Maturity Index values in the heavily polluted sites were surprising. Nematodes turned out to be a suitable organism group for monitoring sediment quality, with generic composition being the most accurate indicator for assessing differences in nematode community structure. - Nematode community structure of river sediments is related to pollution and site structure

Nematode communities in contaminated river sediments

Energy Technology Data Exchange (ETDEWEB)

Heininger, Peter [Federal Institute of Hydrology (BfG), Am Mainzer Tor 1, 56068 Koblenz (Germany); Hoess, Sebastian [Ecossa - Ecological Sediment and Soil Assessment, Thierschstr. 43, 80538 Munich (Germany); Claus, Evelyn [Federal Institute of Hydrology (BfG), Am Mainzer Tor 1, 56068 Koblenz (Germany); Pelzer, Juergen [Federal Institute of Hydrology (BfG), Am Mainzer Tor 1, 56068 Koblenz (Germany); Traunspurger, Walter [University of Bielefeld, Department of Animal Ecology, Morgenbreede 45, 33615 Bielefeld (Germany)]. E-mail: traunspurger@uni-bielefeld.de

2007-03-15

Nematode communities of eight sites from three river catchments were investigated in terms of the genera composition, feeding types, and life-history strategists. The sampling sites showed a gradient of anthropogenic contamination with heavy metals and organic pollutants being important factors in differentiating the sites. Nematode community structure was related to sediment pollution and the hydro-morphological structure of the sampling sites. Heavily contaminated sites were characterized by communities with high relative abundances of omnivorous and predacious nematodes (Tobrilus, c-p 3; Mononchus, c-p 4), while sites with low to medium contamination were dominated by bacterivorous nematodes (Monhystera, Daptonema; c-p 2) or suction feeders (Dorylaimus, c-p 4). The relatively high Maturity Index values in the heavily polluted sites were surprising. Nematodes turned out to be a suitable organism group for monitoring sediment quality, with generic composition being the most accurate indicator for assessing differences in nematode community structure. - Nematode community structure of river sediments is related to pollution and site structure.

Tidal River Elbe - a sediment budget for the grain size fraction of medium sand

Science.gov (United States)

Winterscheid, Axel

2016-04-01

Human interventions have a historic and ongoing impact on estuarine sediment budgets across many estuaries worldwide. An early inference was the construction of embankments resulting in a constant loss of intertidal flats. Additionally, settlement activities and large scale land use changes in the upstream catchment areas had also an effect on sediment inflow rates. Today, the navigation channels in estuaries have been deepened for larger and more efficient vessels to reach a well-developed infrastructure of harbors and industrial areas often located far inland. In the past few years and just within the North-East Atlantic, the total annual amount of dredged sediments dumped at sea varied from 80 to 130 million tons (OSPAR Commission). In most estuaries across Europe the resulting human impact on the sediment fluxes and morphodynamics is significant. A good understanding of estuarine processes is essential for determining useful and meaningful measures to mitigate negative effects and to improve the current situation. Maintenance dredging and its environmental effects are therefore in the focus of public attention. Against this background, it is the aim of the presentation to identify and therefore to separate the particular effect that maintenance dredging has on sediment fluxes and budgets in the estuarine environment. Case study is the Tidal River Elbe in Germany, and here we set the focus on the grain size fraction of medium sand. In the past, river engineering measures forced the natural dynamics to form a concentrated stream flow along a fixed channel, except at a number of locations where side channels still exist. In addition to that, the main channel was deepened several times. The last deepening was in 1999/2000. The most significant deepening, however, took place from 1957 to 1962. Until then, an erosion-stable layer of marine clay (in German called "Klei") formed a flat bottom along most sections of the main channel. After removal of this layer of

Recent scientific advances and their implications for sand management near San Francisco, California: the influences of the ebb tidal delta

Science.gov (United States)

Hanes, Daniel M.; Barnard, Patrick L.; Dallas, Kate; Elias, Edwin; Erikson, Li H.; Eshleman, Jodi; Hansen, Jeff; Hsu, Tian Jian; Shi, Fengyan

2011-01-01

Recent research in the San Francisco, California, U.S.A., coastal region has identified the importance of the ebb tidal delta to coastal processes. A process-based numerical model is found to qualitatively reproduce the equilibrium size and shape of the delta. The ebb tidal delta itself has been contracting over the past century, and the numerical model is applied to investigate the sensitivity of the delta to changes in forcing conditions. The large ebb tidal delta has a strong influence upon regional coastal processes. The prominent bathymetry of the ebb tidal delta protects some of the coast from extreme storm waves, but the delta also focuses wave energy toward the central and southern portions of Ocean Beach. Wave focusing likely contributes to a chronic erosion problem at the southern end of Ocean Beach. The ebb tidal delta in combination with non-linear waves provides a potential cross-shore sediment transport pathway that probably supplies sediment to Ocean Beach.

Modern sedimentary environments in a large tidal estuary, Delaware Bay

Science.gov (United States)

Knebel, H.J.

1989-01-01

Data from an extensive grid of sidescan-sonar records reveal the distribution of sedimentary environments in the large, tidally dominated Delaware Bay estuary. Bathymetric features of the estuary include large tidal channels under the relatively deep (> 10 m water depth) central part of the bay, linear sand shoals (2-8 m relief) that parallel the sides of the tidal channels, and broad, low-relief plains that form the shallow bay margins. The two sedimentary environments that were identified are characterized by either (1) bedload transport and/or erosion or (2) sediment reworking and/or deposition. Sand waves and sand ribbons, composed of medium to coarse sands, define sites of active bedload transport within the tidal channels and in gaps between the linear shoals. The sand waves have spacings that vary from 1 to 70 m, amplitudes of 2 m or less, and crestlines that are usually straight. The orientations of the sand waves and ribbons indicate that bottom sediment movement may be toward either the northwest or southeast along the trends of the tidal channels, although sand-wave asymmetry indicates that the net bottom transport is directed northwestward toward the head of the bay. Gravelly, coarse-grained sediments, which appear as strongly reflective patterns on the sonographs, are also present along the axes and flanks of the tidal channels. These coarse sediments are lag deposits that have developed primarily where older strata were eroded at the bay floor. Conversely, fine sands that compose the linear shoals and muddy sands that cover the shallow bay margins appear mainly on the sonographs either as smooth featureless beds that have uniform light to moderate shading or as mosaics of light and dark patches produced by variations in grain size. These acoustic and textural characteristics are the result of sediment deposition and reworking. Data from this study (1) support the hypothesis that bed configurations under deep tidal flows are functions of current

Mangrove succession enriches the sediment microbial community in South China.

Science.gov (United States)

Chen, Quan; Zhao, Qian; Li, Jing; Jian, Shuguang; Ren, Hai

2016-06-06

Sediment microorganisms help create and maintain mangrove ecosystems. Although the changes in vegetation during mangrove forest succession have been well studied, the changes in the sediment microbial community during mangrove succession are poorly understood. To investigate the changes in the sediment microbial community during succession of mangroves at Zhanjiang, South China, we used phospholipid fatty acid (PLFA) analysis and the following chronosequence from primary to climax community: unvegetated shoal; Avicennia marina community; Aegiceras corniculatum community; and Bruguiera gymnorrhiza + Rhizophora stylosa community. The PLFA concentrations of all sediment microbial groups (total microorganisms, fungi, gram-positive bacteria, gram-negative bacteria, and actinomycetes) increased significantly with each stage of mangrove succession. Microbial PLFA concentrations in the sediment were significantly lower in the wet season than in the dry season. Regression and ordination analyses indicated that the changes in the microbial community with mangrove succession were mainly associated with properties of the aboveground vegetation (mainly plant height) and the sediment (mainly sediment organic matter and total nitrogen). The changes in the sediment microbial community can probably be explained by increases in nutrients and microhabitat heterogeneity during mangrove succession.

Phase lag control of tidally reversing mega-ripple geometry and bed stress in tidal inlets

Science.gov (United States)

Traykovski, P.

2016-02-01

Recent observations in the Columbia River Mouth, New River Inlet, and Wasque Shoals have shown that tidally reversing mega-ripples are an ubiquitous bedform morphology in energetic tidal inlets. As the name implies, these bedforms reverse asymmetry and migration direction in each half tidal cycle. With wavelengths of 2 to 5 m and heights of 0.2 to 0.5 m, these bedforms are larger than current formed ripples, but smaller than dunes. Unlike dunes which have a depth dependent geometry, observations indicate the tidally reversing mega-ripples geometry is related to the time dependent tidal flow and independent of depth. Previous empirical relations for predicting the geometry of ripples or dunes do not successfully predict the geometry of these features. A time dependent geometric model was developed that accounts for the reversal of migration and asymmetry to successfully predict bedform geometry. The model requires sufficient sediment transport in each half tidal cycle to reverse the asymmetry before the bedforms begin to grow. Both the observations and model indicate that the complete reversal of asymmetry and development of a steep lee face occurs near or after maximum flow in each half tidal cycle. This phase lag in bedform response to tidal forcing also has important implications for bed stress in tidal inlets. Observations of frictional drag in the Columbia River mouth based on a tidal momentum balance of surface slope over 10 km regressed against quadratic near bed velocity show drag coefficients that fall off as CD U-1.4. Reynolds stress measurements performed using the dual ADV differencing technique show similar relations. The Reynolds stress measurements also show a dramatic asymmetry between accelerating flows and decelerating flows with a factor of 5 increase during deceleration. Pulse coherent Doppler profiles of near bed turbulence indicate that the turbulence is dominated by energetic fluctuations in separation zones downstream of steep lee faces. The

Climate Variability Structures Plant Community Dynamics in Mediterranean Restored and Reference Tidal Wetlands

Directory of Open Access Journals (Sweden)

Dylan E. Chapple

2017-03-01

Full Text Available In Mediterranean regions and other areas with variable climates, interannual weather variability may impact ecosystem dynamics, and by extension ecological restoration projects. Conditions at reference sites, which are often used to evaluate restoration projects, may also be influenced by weather variability, confounding interpretations of restoration outcomes. To better understand the influence of weather variability on plant community dynamics, we explore change in a vegetation dataset collected between 1990 and 2005 at a historic tidal wetland reference site and a nearby tidal wetland restoration project initiated in 1976 in California’s San Francisco (SF Bay. To determine the factors influencing reference and restoration trajectories, we examine changes in plant community identity in relation to annual salinity levels in the SF Bay, annual rainfall, and tidal channel structure. Over the entire study period, both sites experienced significant directional change away from the 1990 community. Community change was accelerated following low salinity conditions that resulted from strong El Niño events in 1994–1995 and 1997–1998. Overall rates of change were greater at the restoration site and driven by a combination of dominant and sub-dominant species, whereas change at the reference site was driven by sub-dominant species. Sub-dominant species first appeared at the restoration site in 1996 and incrementally increased during each subsequent year, whereas sub-dominant species cover at the reference site peaked in 1999 and subsequently declined. Our results show that frequent, long-term monitoring is needed to adequately capture plant community dynamics in variable Mediterranean ecosystems and demonstrate the need for expanding restoration monitoring and timing restoration actions to match weather conditions.

A Biogeotechnical approach to Stabilize Soft Marine Soil with a Microbial Organic Material called Biopolymer

Science.gov (United States)

Chang, I.; Cho, G. C.; Kwon, Y. M.; Im, J.

2017-12-01

The importance and demands of offshore and coastal area development are increasing due to shortage of usable land and to have access to valuable marine resources. However, most coastal soils are soft sediments, mainly composed with fines (silt and clay) and having high water and organic contents, which induce complicated mechanical- and geochemical- behaviors and even be insufficient in Geotechnical engineering aspects. At least, soil stabilization procedures are required for those soft sediments, regardless of the purpose of usage on the site. One of the most common soft soil stabilization method is using ordinary cement as a soil strengthening binder. However, the use of cement in marine environments is reported to occur environmental concerns such as pH increase and accompanying marine ecosystem disturbance. Therefore, a new environmentally-friendly treatment material for coastal and offshore soils. In this study, a biopolymer material produced by microbes is introduced to enhance the physical behavior of a soft tidal flat sediment by considering the biopolymer rheology, soil mineralogy, and chemical properties of marine water. Biopolymer material used in this study forms inter-particle bonds between particles which is promoted through cation-bridges where the cations are provided from marine water. Moreover, biopolymer treatment renders unique stress-strain relationship of soft soils. The mechanical stiffness (M) instantly increase with the presence of biopolymer, while time-dependent settlement behavior (consolidation) shows a big delay due to the viscous biopolymer hydrogels in pore spaces.

Soft sediment dwelling macro-invertebrates of Rajapur Bay, central west coast of India

Digital Repository Service at National Institute of Oceanography (India)

Harkantra, S.N.; Parulekar, A.H.

Thirtyfour species of soft sediment dwelling macro-invertebrates were recorded in Rajapur Bay at the proposed effluent discharge location of nuclear power plant. The fauna mainly composed of polychaetes (42.52%), molluscs (39.03%), crustaceans (7...

Use of an ADCP to compute suspended-sediment discharge in the tidal Hudson River, New York

Science.gov (United States)

Wall, Gary R.; Nystrom, Elizabeth A.; Litten, Simon

2006-01-01

Acoustic Doppler current profilers (ADCPs) can provide data needed for computation of suspended-sediment discharge in complex river systems, such as tidal rivers, in which conventional methods of collecting time-series data on suspended-sediment concentration (SSC) and water discharge are not feasible. Although ADCPs are not designed to measure SSC, ADCP data can be used as a surrogate under certain environmental conditions. However, the software for such computation is limited, and considerable post-processing is needed to correct and normalize ADCP data for this use. This report documents the sampling design and computational procedure used to calibrate ADCP measures of echo intensity to SSC and water velocity to discharge in the computation of suspended-sediment discharge at the study site on the Hudson River near Poughkeepsie, New York. The methods and procedures described may prove useful to others doing similar work in different locations; however, they are specific to this study site and may have limited applicability elsewhere.

Do Changes in Current Flow as a Result of Arrays of Tidal Turbines Have an Effect on Benthic Communities?

Science.gov (United States)

Kregting, Louise; Elsaesser, Bjoern; Kennedy, Robert; Smyth, David; O'Carroll, Jack; Savidge, Graham

2016-01-01

Arrays of tidal energy converters have the potential to provide clean renewable energy for future generations. Benthic communities may, however, be affected by changes in current speeds resulting from arrays of tidal converters located in areas characterised by strong currents. Current speed, together with bottom type and depth, strongly influence benthic community distributions; however the interaction of these factors in controlling benthic dynamics in high energy environments is poorly understood. The Strangford Lough Narrows, the location of SeaGen, the world's first single full-scale, grid-compliant tidal energy extractor, is characterised by spatially heterogenous high current flows. A hydrodynamic model was used to select a range of benthic community study sites that had median flow velocities between 1.5-2.4 m/s in a depth range of 25-30 m. 25 sites were sampled for macrobenthic community structure using drop down video survey to test the sensitivity of the distribution of benthic communities to changes in the flow field. A diverse range of species were recorded which were consistent with those for high current flow environments and corresponding to very tide-swept faunal communities in the EUNIS classification. However, over the velocity range investigated, no changes in benthic communities were observed. This suggested that the high physical disturbance associated with the high current flows in the Strangford Narrows reflected the opportunistic nature of the benthic species present with individuals being continuously and randomly affected by turbulent forces and physical damage. It is concluded that during operation, the removal of energy by marine tidal energy arrays in the far-field is unlikely to have a significant effect on benthic communities in high flow environments. The results are of major significance to developers and regulators in the tidal energy industry when considering the environmental impacts for site licences.

Tidal pumping facilitates dissimilatory nitrate reduction in intertidal marshes

Science.gov (United States)

Zheng, Yanling; Hou, Lijun; Liu, Min; Liu, Zhanfei; Li, Xiaofei; Lin, Xianbiao; Yin, Guoyu; Gao, Juan; Yu, Chendi; Wang, Rong; Jiang, Xiaofen

2016-01-01

Intertidal marshes are alternately exposed and submerged due to periodic ebb and flood tides. The tidal cycle is important in controlling the biogeochemical processes of these ecosystems. Intertidal sediments are important hotspots of dissimilatory nitrate reduction and interacting nitrogen cycling microorganisms, but the effect of tides on dissimilatory nitrate reduction, including denitrification, anaerobic ammonium oxidation and dissimilatory nitrate reduction to ammonium, remains unexplored in these habitats. Here, we use isotope-tracing and molecular approaches simultaneously to show that both nitrate-reduction activities and associated functional bacterial abundances are enhanced at the sediment-tidal water interface and at the tide-induced groundwater fluctuating layer. This pattern suggests that tidal pumping may sustain dissimilatory nitrate reduction in intertidal zones. The tidal effect is supported further by nutrient profiles, fluctuations in nitrogen components over flood-ebb tidal cycles, and tidal simulation experiments. This study demonstrates the importance of tides in regulating the dynamics of dissimilatory nitrate-reducing pathways and thus provides new insights into the biogeochemical cycles of nitrogen and other elements in intertidal marshes. PMID:26883983

Long-term divergent tidal flat benthic community recovery following hypoxia-induced mortality

NARCIS (Netherlands)

Colen, van C.; Montserrat, F.; Vincx, M.; Herman, P.M.J.; Ysebaert, T.; Degraer, S.

2010-01-01

Macrobenthos recovery after hypoxia-induced mass mortality was assessed in an estuarine tidal mudflat during 3 years. During the first 2 years, a Pearson-Rosenberg type of community recovery took place along with the improving bottom water oxygen conditions. After 3 months, spionid polychaetes

Gold-bearing fluvial and associated tidal marine sediments of Proterozoic age in the Mporokoso Basin, northern Zambia

Science.gov (United States)

Andrews-Speed, C. P.

1986-07-01

The structurally defined Mporokoso Basin contains up to 5000 m of continental and marine clastic sediments and minor silicic volcanics which together form the Mporokoso Group. These rocks overlie unconformably a basement of silicic-intermediate igneous rocks and accumulated within the interval 1830-1130 Ma. This sedimentological study was restricted to the eastern end of the basin and was part of an assessment of the potential for palaeoplacer gold in the Mporokoso Group. At the base of the Mporokoso Group, the Mbala Formation consists of 1000-1500 m of purple sandstones and conglomerates deposited in a braided-stream system overlain by 500-1000 m of mature quartz arenites deposited in a tidal marine setting. A general coarsening-upward trend exists within the fluvial sediments. Sandy, distal braided-stream facies passes upwards into more proximal conglomeratic facies. In proximal sections, poorly sorted conglomerates form the top of the coarsening-up sequence which is 500-700 m thick. The overlying fluvial sediments fine upwards. The tidal marine sandstones at the top of the Mbala Formation resulted from reworking of fluvial sediments during a marine transgression. Well-exposed sections with fluvial conglomerates were studied in detail. Individual conglomerate bodies form sheets extending for hundreds of metres downstream and at least one hundred metres across stream, with little sign of deep scouring or channelling. They are generally matrix-supported. The whole fluvial sequence is characterised by a paucity of mud or silt. These conglomerates were deposited by large velocity, sheet flows of water which transported a bed-load of pebbles and sand. Most fine material settling out from suspension was eroded by the next flow. The great lateral and vertical extent and the uniformity of the fluvial sediments suggest that the sediments accumulated over an unconfined alluvial plain and that the tectonic evolution of the source area was relatively continuous and not

Classification of tidal inlets along the Central east coast of India

Digital Repository Service at National Institute of Oceanography (India)

Reddy, N.A.; Vikas, M.; Rao, S.; JayaKumar S.

) as long as the alongshore sediment bypasses the tidal inlet. Classification of coastal systems in a broader view is necessary for the management of tidal inlets. There are several methods to classify tidal inlets based on different perspectives namely geo...

Energy Gradients Structure Microbial Communities Across Sediment Horizons in Deep Marine Sediments of the South China Sea

Science.gov (United States)

Graw, Michael F.; D'Angelo, Grace; Borchers, Matthew; Thurber, Andrew R.; Johnson, Joel E.; Zhang, Chuanlun; Liu, Haodong; Colwell, Frederick S.

2018-01-01

The deep marine subsurface is a heterogeneous environment in which the assembly of microbial communities is thought to be controlled by a combination of organic matter deposition, electron acceptor availability, and sedimentology. However, the relative importance of these factors in structuring microbial communities in marine sediments remains unclear. The South China Sea (SCS) experiences significant variability in sedimentation across the basin and features discrete changes in sedimentology as a result of episodic deposition of turbidites and volcanic ashes within lithogenic clays and siliceous or calcareous ooze deposits throughout the basin's history. Deep subsurface microbial communities were recently sampled by the International Ocean Discovery Program (IODP) at three locations in the SCS with sedimentation rates of 5, 12, and 20 cm per thousand years. Here, we used Illumina sequencing of the 16S ribosomal RNA gene to characterize deep subsurface microbial communities from distinct sediment types at these sites. Communities across all sites were dominated by several poorly characterized taxa implicated in organic matter degradation, including Atribacteria, Dehalococcoidia, and Aerophobetes. Sulfate-reducing bacteria comprised only 4% of the community across sulfate-bearing sediments from multiple cores and did not change in abundance in sediments from the methanogenic zone at the site with the lowest sedimentation rate. Microbial communities were significantly structured by sediment age and the availability of sulfate as an electron acceptor in pore waters. However, microbial communities demonstrated no partitioning based on the sediment type they inhabited. These results indicate that microbial communities in the SCS are structured by the availability of electron donors and acceptors rather than sedimentological characteristics. PMID:29696012

Seasonal sediment dynamics shape temperate bedrock reef communities

Science.gov (United States)

Figurski, Jared D.; Freiwald, Jan; Lonhart, Steve I.; Storlazzi, Curt

2016-01-01

Mobilized seafloor sediment can impact benthic reef communities through burial, scour, and turbidity. These processes are ubiquitous in coastal oceans and, through their influence on the survival, fitness, and interactions of species, can alter the structure and function of benthic communities. In northern Monterey Bay, California, USA, as much as 30% of the seafloor is buried or exposed seasonally, making this an ideal location to test how subtidal temperate rocky reef communities vary in the presence and absence of chronic sediment-based disturbances. Designated dynamic plots were naturally inundated by sediment in summer (50 to 100% cover) and swept clean in winter, whereas designated stable plots remained free of sediment during our study. Multivariate analyses indicated significant differences in the structure of sessile and mobile communities between dynamic and stable reef habitats. For sessile species, community structure in disturbed plots was less variable in space and time than in stable plots due to the maintenance of an early successional state. In contrast, community structure of mobile species varied more in disturbed plots than in stable plots, reflecting how mobile species distribute in response to sediment dynamics. Some species were found only in these disturbed areas, suggesting that the spatial mosaic of disturbance could increase regional diversity. We discuss how the relative ability of species to tolerate disturbance at different life history stages and their ability to colonize habitat translate into community-level differences among habitats, and how this response varies between mobile and sessile communities.

Coupled Landscape and Channel Dynamics in the Ganges-Brahmaputra Tidal Deltaplain, Southwest Bangladesh

Science.gov (United States)

Bomer, J.; Wilson, C.; Hale, R. P.

2017-12-01

In the Ganges-Brahmaputra Delta (GBD) and other tide-dominated systems, periodic flooding of the land surface during the tidal cycle promotes sediment accretion and surface elevation gain over time. However, over the past several decades, anthropogenic modification of the GBD tidal deltaplain through embankment construction has precluded sediment delivery to catchment areas, leading to widespread channel siltation and subsidence in poldered landscapes. Amongst the current discussion on GBD sustainability, the relationship between tidal inundation period and resultant sedimentation in natural and embanked settings remains unclear. Moreover, an evaluation of how riparian sedimentology and stratigraphic architecture changes across the GBD tidal-fluvial spectrum is notably absent, despite its critical importance in assessing geomorphic change in human-impacted transitional environments. To provide local-scale, longitudinal trends of coupled landscape-channel dynamics, an array of surface elevation tables, groundwater piezometers, and sediment traps deployed in natural and embanked settings have been monitored seasonally over a time span of 4 years. This knowledge base will be extended across the GBD tidal-fluvial transition by collecting sediment cores from carefully selected point bars along the Gorai River. Sediments will be analyzed for lithologic, biostratigraphic, and geochemical properties to provide an integrated framework for discerning depositional zones and associated facies assemblages across this complex transitional environment. Preliminary comparisons of accretion and hydroperiod data suggest that inundation duration strongly governs mass accumulation on the intertidal platform, though other factors such as mass extraction from sediment source and vegetation density may play secondary roles.

Bedload transport in an inlet channel during a tidal cycle

DEFF Research Database (Denmark)

Ernstsen, V. B.; Becker, M.; Winter, C.

2007-01-01

  Based on high-resolution swath bathymetry measurements at centimetre-scale precision conducted during a tidal cycle in a dune field in the Grådyb tidal inlet channel in the DanishWadden Sea, a simple tool to calculate bedload transport is presented. Bedload transport was related to simultaneous...... variations in grain-size composition of the mobilised sediment should be taken into account by sediment transport formulae....

Loads of suspended sediment and nutrients from local nonpoint sources to the tidal Potomac River and Estuary, Maryland and Virginia, 1979-81 water years

Science.gov (United States)

Hickman, R. Edward

1987-01-01

Loads of suspended sediment, phosphorus, nitrogen, biochemical oxygen demand, and dissolved silica discharged to the tidal Potomac River and Estuary during the !979-81 water years from three local nonpoint sources have been calculated. The loads in rain falling directly upon the tidal water surface and from overflows of the combined sewer system of the District of Columbia were determined from available information. Loads of materials in the streamflow from local watersheds draining directly to the tidal Potomac River and Estuary downstream from Chain Bridge in Washington, D.C., were calculated from samples of streamflow leaving five monitored watersheds. Average annual yields of substances leaving three urban watersheds (Rock Creek and the Northwest and Northeast Branches of the Anacostia River) and the rural Saint Clements Creek watershed were calculated either by developing relationships between concentration and streamflow or by using the mean of measured concentrations. Yields calculated for the 1979-81 water years are up to 2.3 times period-of-record yields because of greater than average streamflow and stormflow during this 3-year period. Period-of-record yields of suspended sediment from the three urban watersheds and the Saint Clements Creek watershed do not agree with yields reported by other studies. The yields from the urban watersheds are 17 to 51 percent of yields calculated using sediment-concentration data collected during the 1960-62 water years. Previous studies suggest that this decrease is at least partly due to the imposition of effective sediment controls at construction sites and to the construction of two multipurpose reservoirs. The yield calculated for the rural Saint Clements Creek watershed is at least twice the yields calculated for other rural watersheds, a result that may be due to most of the samples of this stream being taken during the summer of the 1981 water year, a very dry period. Loads discharged from all local tributary

Energy Gradients Structure Microbial Communities Across Sediment Horizons in Deep Marine Sediments of the South China Sea

Directory of Open Access Journals (Sweden)

Michael F. Graw

2018-04-01

Full Text Available The deep marine subsurface is a heterogeneous environment in which the assembly of microbial communities is thought to be controlled by a combination of organic matter deposition, electron acceptor availability, and sedimentology. However, the relative importance of these factors in structuring microbial communities in marine sediments remains unclear. The South China Sea (SCS experiences significant variability in sedimentation across the basin and features discrete changes in sedimentology as a result of episodic deposition of turbidites and volcanic ashes within lithogenic clays and siliceous or calcareous ooze deposits throughout the basin's history. Deep subsurface microbial communities were recently sampled by the International Ocean Discovery Program (IODP at three locations in the SCS with sedimentation rates of 5, 12, and 20 cm per thousand years. Here, we used Illumina sequencing of the 16S ribosomal RNA gene to characterize deep subsurface microbial communities from distinct sediment types at these sites. Communities across all sites were dominated by several poorly characterized taxa implicated in organic matter degradation, including Atribacteria, Dehalococcoidia, and Aerophobetes. Sulfate-reducing bacteria comprised only 4% of the community across sulfate-bearing sediments from multiple cores and did not change in abundance in sediments from the methanogenic zone at the site with the lowest sedimentation rate. Microbial communities were significantly structured by sediment age and the availability of sulfate as an electron acceptor in pore waters. However, microbial communities demonstrated no partitioning based on the sediment type they inhabited. These results indicate that microbial communities in the SCS are structured by the availability of electron donors and acceptors rather than sedimentological characteristics.

Selected contributions from the 9th International Conference on Tidal Sedimentology, November 2015, Puerto Madryn, Patagonia, Argentina: an introduction

Science.gov (United States)

Scasso, Roberto A.; Cuitiño, José I.

2017-08-01

This special issue of Geo-Marine Letters presents selected contributions from the 9th International Conference on Tidal Sedimentology held on 17-19 November 2015 in Puerto Madryn, Chubut Province, Patagonia, Argentina. The guest editors are the conference organizers Roberto A. Scasso and José I. Cuitiño. Gerardo M. Perillo was the head of the Scientific Committee. The conferences on tidal sedimentology have been traditionally held every 4 years. However, only 3 years separated the last conference held in Caen (France, 2012) from this conference. Increasing numbers of contributions and the growing interest in tidal sedimentation have been the reasons for shortening the inter-conference period. The 2015 conference served as a discussion forum focusing on advances in modern and ancient tidal sedimentation at different locations worldwide. The papers presented in this Special Issue provide a selective view of the latest research results, the main topics dealing with tidal hydrodynamics and sediment transport, tidal coastal morphodynamics, modern and ancient tidal sedimentation, geotechnical processes in tidal environments, and tidal basins, facies and reservoirs.

The fish community of East Cape tidal pools and an assessment of ...

African Journals Online (AJOL)

Fish occurring in tidal pools in the lower balanoid zone near Port Elizabeth were examined by visual census and rotenone collections. Numerically, Clinidae constituted 28% of the community, Sparidae 23%, Gobiidae 17% and the Cheilodactylidae 12%, while eleven other families contributed to the remaining 20%. The 44 ...

Organic geochemistry in Pennsylvanian tidally influenced sediments from SW Indiana

Science.gov (United States)

Mastalerz, Maria; Kvale, E.P.; Stankiewicz, B.A.; Portle, K.

1999-01-01

Tidal rhythmites are vertically stacked small-scale sedimentary structures that record daily variations in tidal current energy and are known to overlie some low-sulfur coals in the Illinois Basin. Tidal rhythmites from the Pennsylvanian Brazil Formation in Indiana have been analyzed sedimentologically, petrographically, and geochemically in order to understand the character and distribution of organic matter (OM) preserved in an environment of daily interactions between marine and fresh waters. The concentration of organic matter (TOC) ranges from traces to 6.9% and sulfur rarely exceeds 0.1% in individual laminae. Angular vitrinite is the major organic matter type, accounting for 50-90% of total OM. The C/S ratio decreases as the verfical distance from the underlying coal increases. A decreasing C/S ratio coupled with decreases in Pr/Ph, Pr/n-C17, Ph/n-C18 ratios and a shift of carbon isotopic composition towards less negative values suggest an increase in salinity from freshwater in the mudflat tidal rhythmite facies close to the coal to brackish/marine in the sandflat tidal rhythmite facies further above from the coal. Within an interval spanning one year of deposition, TOC and S values show monthly variability. On a daily scale, TOC and S oscillations are still detectable but they are of lower magnitude than on a monthly scale. These small-scale variations are believed to reflect oscillations in water salinity related to tidal cycles.Tidal rhythmites are vertically stacked small-scale sedimentary structures that record daily variations in tidal current energy and are known to overlie some low-sulfur coals in the Illinois Basin. Tidal rhythmites from the Pennsylvanian Brazil Formation in Indiana have been analyzed sedimentologically, petrographically, and geochemically in order to understand the character and distribution of organic matter (OM) preserved in an environment of daily interactions between marine and fresh waters. The concentration of organic matter

Physical processes affecting turbidity in a tidal marsh across a range of time scales

Science.gov (United States)

Arnold, W.; Poindexter, C.

2016-12-01

The direction of net suspended sediment flux, whether into or out of a tidal marsh, can determine whether a marsh is aggrading or eroding. Measuring net suspended sediment fluxes or attributing trends in these fluxes to a particular physical processes is challenging because suspended sediment concentrations are highly variable in time. We used singular spectrum analysis for time series with missing data (SSAM) to observe the relative effects on turbidity of physical processes occurring on different time scales at the Rush Ranch Open Space Preserve. This Preserve covers the largest contiguous area of full-tidal marsh remaining within Suisun Bay, the eastern most subembayment of San Francisco Bay. A long-term monitoring station at First Mallard Slough within the Preserve measures turbidity. Our analysis of of this turbidity record isolated the contribution to total variance from different tides and from annual cycles of San Francisco Bay freshwater inflow, sediment deposition and wind-driven sediment resuspension. Surprisingly, the contribution from diurnal and semidiurnal tidal constituents (30%) was smaller than the contribution from annual cycles of freshwater inflow, sediment deposition and resuspension (38%). This result contrasts with the original implementation of SSAM to suspended sediment concentration, which was conducted in the central San Francisco Bay. This previous work indicated a significant yet smaller contribution (13%) to total suspended sediment concentration variance from annual cycles (Schoellhamer, D. H., 2002, Continental Shelf Research., 22, 1857-1866). The reason for the contrast relates in part to the location of the First Mallard Slough more than 10 km along the tidal channel network from Suisun Bay. At this location, the lowest frequency variation in suspended sediment is accentuated. Annual peaks in turbidity at First Mallard depend not only on spring and summer wind-driven resuspension of sediment in San Pablo Bay but also its co

A life-cycle model for wave-dominated tidal inlets along passive margin coasts of North America

Science.gov (United States)

Seminack, Christopher T.; McBride, Randolph A.

2018-03-01

A regional overview of 107 wave-dominated tidal inlets along the U.S. Atlantic coast, U.S. Gulf of Mexico coast, and Canadian Gulf of St. Lawrence coast yielded a generalized wave-dominated tidal inlet life-cycle model that recognized the rotational nature of tidal inlets. Tidal inlets are influenced by concurrently acting processes transpiring over two timescales: short-term, event-driven processes and long-term, evolutionary processes. Wave-dominated tidal inlets are classified into three rotational categories based on net longshore sediment transport direction and rotation direction along the landward (back-barrier) portion of the inlet channel: downdrift channel rotation, updrift channel rotation, or little-to-no channel rotation. Lateral shifting of the flood-tidal delta depocenter in response to available estuarine accommodation space appears to control inlet channel rotation. Flood-tidal delta deposits fill accommodation space locally within the estuary (i.e., creating bathymetric highs), causing the tidal-inlet channel to rotate. External influences, such as fluvial discharge, pre-existing back-barrier channels, and impeding salt marsh will also influence inlet-channel rotation. Storm events may rejuvenate the tidal inlet by scouring sediment within the flood-tidal delta, increasing local accommodation space. Wave-dominated tidal inlets are generally unstable and tend to open, concurrently migrate laterally and rotate, infill, and close. Channel rotation is a primary reason for wave-dominated tidal inlet closure. During rotation, the inlet channel lengthens and hydraulic efficiency decreases, thus causing tidal prism to decrease. Tidal prism, estuarine accommodation space, and sediment supply to the flood-tidal delta are the primary variables responsible for tidal inlet rotation. Stability of wave-dominated tidal inlets is further explained by: stability (S) = tidal prism (Ω) + estuarine accommodation space (V) - volume of annual sediment supply (Mt

A preliminary investigation of the distribution of heavy metals in surface sediments of the Cona tidal marsh (Venice Lagoon)

International Nuclear Information System (INIS)

Bernardi, S.; Costa, F.; Vazzoler, S.; Zonta, R.

1988-01-01

Data are from the two series of surface sediment sampling in an interface area between the Venice Lagoon and the mainland. The distribution of heavy metals gives a correlation with polluted sourcesites-identified in the channel systems with a highly polluted input-and allows us to identify the localities of accumulation. Restricted to the estuary of the river tributary transporting a high concentration of pollutants into a tidal marsh area of the lagoon, the study shows the effect of the fresh water forcing to distribute heavy metals on surface sediments. Within the scope of this preliminary investigation, indications from sampling identify a sector of the 'palude of Cona' in this estuary, which is highly suitable for detailed studies on precesses affecting heavy-metal distributions in bottom surface sediments of shallow-water areas

A Summary of the San Francisco Tidal Wetlands Restoration Series

Directory of Open Access Journals (Sweden)

Larry R. Brown

2003-10-01

Full Text Available The four topical articles of the Tidal Wetlands Restoration Series summarized and synthesized much of what is known about tidal wetlands and tidal wetland restoration in the San Francisco Estuary (hereafter “Estuary”. Despite a substantial amount of available information, major uncertainties remain. A major uncertainty with regard to fishes is the net benefit of restored tidal wetlands relative to other habitats for native fishes in different regions of the Estuary given the presence of numerous invasive alien species. With regard to organic carbon, a major uncertainty is the net benefit of land use change given uncertainty about the quantity and quality of different forms of organic carbon resulting from different land uses. A major challenge is determining the flux of organic carbon from open systems like tidal wetlands. Converting present land uses to tidal wetlands will almost certainly result in increased methylation of mercury at the local scale with associated accumulation of mercury within local food webs. However, it is unclear if such local accumulation is of concern for fish, wildlife or humans at the local scale or if cumulative effects at the regional scale will emerge. Based on available information it is expected that restored tidal wetlands will remain stable once constructed; however, there is uncertainty associated with the available data regarding the balance of sediment accretion, sea-level rise, and sediment erosion. There is also uncertainty regarding the cumulative effect of many tidal restoration projects on sediment supply. The conclusions of the articles highlight the need to adopt a regional and multidisciplinary approach to tidal wetland restoration in the Estuary. The Science Program of the CALFED effort provides an appropriate venue for addressing these issues.

Maine Tidal Power Initiative: Environmental Impact Protocols For Tidal Power

Energy Technology Data Exchange (ETDEWEB)

Peterson, Michael Leroy [Univ. of Maine, Orono, ME; Zydlewski, Gayle Barbin [Univ. of Maine, Orono, ME; Xue, Huijie [Univ. of Maine, Orono, ME; Johnson, Teresa R. [Univ. of Maine, Orono, ME

2014-02-02

The Maine Tidal Power Initiative (MTPI), an interdisciplinary group of engineers, biologists, oceanographers, and social scientists, has been conducting research to evaluate tidal energy resources and better understand the potential effects and impacts of marine hydro-kinetic (MHK) development on the environment and local community. Project efforts include: 1) resource assessment, 2) development of initial device design parameters using scale model tests, 3) baseline environmental studies and monitoring, and 4) human and community responses. This work included in-situ measurement of the environmental and social response to the pre-commercial Turbine Generator Unit (TGU®) developed by Ocean Renewable Power Company (ORPC) as well as considering the path forward for smaller community scale projects.

Modeling Interactions between Backbarrier Marshes, Tidal Inlets, Ebb-deltas, and Adjacent Barriers Exposed to Rising Sea Levels

Science.gov (United States)

Hanegan, K.; Georgiou, I. Y.; FitzGerald, D.

2016-02-01

Along barrier island chains, tidal exchange between the backbarrier and the coastal ocean supports unique saltwater and brackish ecosystems and is responsible for exporting sediment and nutrients to the surrounding coast. Tidal prism, basement controls, and wave and tidal energy dictate the size and number of tidal inlets and the volume of sand sequestered in ebb-tidal deltas. The inlet tidal prism is a function of bay area, tidal range, and secondary controls, including flow inertia, basinal hypsometry, and frictional factors. Sea- level rise (SLR) is threatening coastal environments, causing mainland flooding, changes in sediment supply, and conversion of wetlands and tidal flats to open water. These factors are impacting basinal hypsometry and increasing open water area, resulting in enlarging tidal prisms, increased dimensions of tidal inlets and ebb-tidal deltas, and erosion along adjacent barrier shorelines. Although the effects of SLR on coastal morphology are difficult to study by field observations alone, physics-based numerical models provide a sophisticated means of analyzing coastal processes over decadal time-scales and linking process causation to long term development. Here, we use a numerical model that includes relevant features in the barrier/tidal basin system, linking back-barrier marsh degradation, inlet expansion, and ebb-delta growth to barrier erosion through long-term hydrodynamic and morphology simulations. Sediment exchange and process interactions are investigated using an idealized domain resembling backbarrier basins of mixed energy coasts so that the sensitivity to varying SLR rates, interior marsh loss, sediment supply, and hydrodynamic controls can be more easily analyzed. Model runs explore these processes over geologic time scales, demonstrating the vulnerability of backbarrier systems to projected SLR and marsh loss. Results demonstrate the links between changing basin morphology and shoreface sedimentation patterns that initiate

Has Phytodetritus Processing by an Abyssal Soft-Sediment Community Recovered 26 Years after an Experimental Disturbance?

Directory of Open Access Journals (Sweden)

Tanja Stratmann

2018-02-01

Full Text Available The potential harvest of polymetallic nodules will heavily impact the abyssal, soft sediment ecosystem by removing sediment, hard substrate, and associated fauna inside mined areas. It is therefore important to know whether the ecosystem can recover from this disturbance and if so at which rate. The first objective of this study was to measure recovery of phytodetritus processing by the benthic food web from a sediment disturbance experiment in 1989. The second objective was to determine the role of holothurians in the uptake of fresh phytodetritus by the benthic food web. To meet both objectives, large benthic incubation chambers (CUBEs; 50 × 50 × 50 cm were deployed inside plow tracks (with and without holothurian presence and at a reference site (holothurian presence, only at 4100 m water depth. Shortly after deployment, 13C- and 15N-labeled phytodetritus was injected in the incubation chambers and during the subsequent 3-day incubation period, water samples were taken five times to measure the production of 13C-dissolved inorganic carbon over time. At the end of the incubation, holothurians and sediment samples were taken to determine biomass, densities and incorporation of 13C and 15N into bacteria, nematodes, macrofauna, and holothurians. For the first objective, the results showed that biomass of bacteria, nematodes and macrofauna did not differ between reference sites and plow track sites when holothurians were present. Additionally, meiofauna and macrofauna taxonomic composition was not significantly different between the sites. In contrast, total 13C uptake by bacteria, nematodes and holothurians was significantly lower at plow track sites compared to reference sites, though the number of replicates was low. This result suggests that important ecosystem functions such as organic matter processing have not fully recovered from the disturbance that occurred 26 years prior to our study. For the second objective, the analysis indicated

Can barrier islands survive sea level rise? Tidal inlets versus storm overwash

Science.gov (United States)

Nienhuis, J.; Lorenzo-Trueba, J.

2017-12-01

Barrier island response to sea level rise depends on their ability to transgress and move sediment to the back barrier, either through flood-tidal delta deposition or via storm overwash. Our understanding of these processes over decadal to centennial timescales, however, is limited and poorly constrained. We have developed a new barrier inlet environment (BRIE) model to better understand the interplay between tidal dynamics, overwash fluxes, and sea-level rise on barrier evolution. The BRIE model combines existing overwash and shoreface formulations [Lorenzo-Trueba and Ashton, 2014] with alongshore sediment transport, inlet stability [Escoffier, 1940], inlet migration and flood-tidal delta deposition [Nienhuis and Ashton, 2016]. Within BRIE, inlets can open, close, migrate, merge with other inlets, and build flood-tidal delta deposits. The model accounts for feedbacks between overwash and inlets through their mutual dependence on barrier geometry. Model results suggest that when flood-tidal delta deposition is sufficiently large, barriers require less storm overwash to transgress and aggrade during sea level rise. In particular in micro-tidal environments with asymmetric wave climates and high alongshore sediment transport, tidal inlets are effective in depositing flood-tidal deltas and constitute the majority of the transgressive sediment flux. Additionally, we show that artificial inlet stabilization (via jetty construction or maintenance dredging) can make barrier islands more vulnerable to sea level rise. Escoffier, F. F. (1940), The Stability of Tidal Inlets, Shore and Beach, 8(4), 114-115. Lorenzo-Trueba, J., and A. D. Ashton (2014), Rollover, drowning, and discontinuous retreat: Distinct modes of barrier response to sea-level rise arising from a simple morphodynamic model, J. Geophys. Res. Earth Surf., 119(4), 779-801, doi:10.1002/2013JF002941. Nienhuis, J. H., and A. D. Ashton (2016), Mechanics and rates of tidal inlet migration: Modeling and application to

Soft-sediment deformation in New Zealand: Structures resulting from the 2010/11 Christchurch earthquakes and comparison with Pleistocene sediments of the Taupo Volcanic Zone (TVZ)

Science.gov (United States)

Scholz, C.; Downs, D. T.; Gravley, D.; Quigley, M.; Rowland, J. V.

2011-12-01

The distinction between seismites and other event-related soft-sediment deformation is a challenging problem. Recognition and interpretation is aided by comparison of recent examples produced during known seismic events and those generated experimentally. Seismites are important features, once recognized in a rock, for interpretations of paleotectonic environment, tectonic relationships of sediments in basins, sedimentary facies analysis, evaluation of earthquake frequency and hazard and consequent land managment. Two examples of soft-sediment deformation, potentially generated through ground shaking and associated liquefaction, are described from within the TVZ: 1) Near Matata on the western margin of the Whakatane Graben. This location has a complicated en-echelon fault history and large earthquakes occur from time to time (e.g., 1987 ML6.3 Edgecumbe event). The structures occur in ~550 ka volcanic sediments, and represent soft-sediment deformation within stratigraphically-bounded layers. Based on paleoenvironment, appearance, and diagnostic criteria described by other authors (Sims 1975; Hempton and Dewey 1983), we interpret these features to have formed by ground shaking related to an earthquake and/or possibly accompanying large volcanic eruptions, rather than by slope failure. 2) Near Taupo, 3 km from the active Kaiapo fault. Lakeward dipping, nearly horizontal lacustrine sediments overlay Taupo Ignimbrite (1.8 ka). At one outcrop the lake beds have subsided into the underlying substrate resulting in kidney-shaped features. These structures formed as a result of liquefaction of the underlying substrate, which may have been caused by ground shaking related to either seismic or volcanic activity. However, inferred time relationships are more consistent with seismic-induced ground shaking. We compare and contrast the form and geometry of the above structures with seismites generated during the recent Christchurch earthquakes (Sep. 2010 and Feb. 2011). Hempton, M

Sediment Microbial Communities Influenced by Cool Hydrothermal Fluid Migration

Directory of Open Access Journals (Sweden)

Laura A. Zinke

2018-06-01

Full Text Available Cool hydrothermal systems (CHSs are prevalent across the seafloor and discharge fluid volumes that rival oceanic input from rivers, yet the microbial ecology of these systems are poorly constrained. The Dorado Outcrop on the ridge flank of the Cocos Plate in the northeastern tropical Pacific Ocean is the first confirmed CHS, discharging minimally altered <15°C fluid from the shallow lithosphere through diffuse venting and seepage. In this paper, we characterize the resident sediment microbial communities influenced by cool hydrothermal advection, which is evident from nitrate and oxygen concentrations. 16S rRNA gene sequencing revealed that Thaumarchaea, Proteobacteria, and Planctomycetes were the most abundant phyla in all sediments across the system regardless of influence from seepage. Members of the Thaumarchaeota (Marine Group I, Alphaproteobacteria (Rhodospirillales, Nitrospirae, Nitrospina, Acidobacteria, and Gemmatimonadetes were enriched in the sediments influenced by CHS advection. Of the various geochemical parameters investigated, nitrate concentrations correlated best with microbial community structure, indicating structuring based on seepage of nitrate-rich fluids. A comparison of microbial communities from hydrothermal sediments, seafloor basalts, and local seawater at Dorado Outcrop showed differences that highlight the distinct niche space in CHS. Sediment microbial communities from Dorado Outcrop differ from those at previously characterized, warmer CHS sediment, but are similar to deep-sea sediment habitats with surficial ferromanganese nodules, such as the Clarion Clipperton Zone. We conclude that cool hydrothermal venting at seafloor outcrops can alter the local sedimentary oxidation–reduction pathways, which in turn influences the microbial communities within the fluid discharge affected sediment.

Earthquake-induced soft-sediment deformations and seismically amplified erosion rates recorded in varved sediments of Köyceğiz Lake (SW Turkey)

KAUST Repository

Avsar, Ulas

2016-06-06

Earthquake-triggered landslides amplify erosion rates in catchments, i.e. catchment response to seismic shocks (CR). In addition to historical eyewitness accounts of muddy rivers implying CRs after large earthquakes, several studies have quantitatively reported increased sediment concentrations in rivers after earthquakes. However, only a few paleolimnological studies could detect CRs within lacustrine sedimentary sequences as siliciclastic-enriched intercalations within background sedimentation. Since siliciclastic-enriched intercalations can easily be of non-seismic origin, their temporal correlation with nearby earthquakes is crucial to assign a seismic triggering mechanism. In most cases, either uncertainties in dating methods or the lack of recent seismic activity has prevented reliable temporal correlations, making the seismic origin of observed sedimentary events questionable. Here, we attempt to remove this question mark by presenting sedimentary traces of CRs in the 370-year-long varved sequence of Köyceğiz Lake (SW Turkey) that we compare with estimated peak ground acceleration (PGA) values of several nearby earthquakes. We find that earthquakes exceeding estimated PGA values of ca. 20 cm/s2 can induce soft-sediment deformations (SSD), while CRs seem only to be triggered by PGA levels higher than 70 cm/s2. In Köyceğiz Lake, CRs produce Cr- and Ni-enriched sedimentation due to the seismically mobilized soils derived from ultramafic rocks in the catchment. Given the varve chronology, the residence time of the seismically mobilized material in the catchment is determined to be 5 to 10 years.

Cesium, manganese and cobalt water-sediment transfer kinetics and diffusion into mangrove sediments inferred by radiotracer experiments

International Nuclear Information System (INIS)

Machado, E.C.; Machado, W.; Patchineelam, S.R.

2012-01-01

A study on the trace elements transfer from tidal water to mangrove sediments from Guanabara Bay (southeastern Brazil) was performed in laboratory microcosms. Sediment cores were covered with tidal water spiked with 137 Cs, 54 Mn and 57 Co during 5-h experiments, and water samples were taken at regular intervals to measure uptake kinetics at the sediment-water interface. At the end of the experiments, the uptake and diffusional penetration into the sediments was evaluated. Half-removal times from water to sediments were slightly higher for 137 Cs (3.4 ± 1.7 h) than observed for 54 Mn (2.3 ± 0.2 h) and 57 Co (2.6 ± 1.1 h). After these experiments, all radioisotopes presented decreasing activities with increasing sediment depth, being the distribution of 137 Cs indicative of higher diffusion within the upper 2 cm. This study on the removal of 137 Cs, 54 Mn and 57 Co from tidal water by mangrove sediments suggests that while 57 Co and 54 Mn presented closer behaviors, there was a slightly higher mobility of 137 Cs. (author)

Site condition, structure, and growth of baldcypress along tidal/non-tidal salinity gradients

Science.gov (United States)

Krauss, K.W.; Duberstein, J.A.; Doyle, T.W.; Conner, W.H.; Day, Richard H.; Inabinette, L.W.; Whitbeck, J.L.

2009-01-01

This report documents changes in forest structure and growth potential of dominant trees in salt-impacted tidal and non-tidal baldcypress wetlands of the southeastern United States. We inventoried basal area and tree height, and monitored incremental growth (in basal area) of codominant baldcypress (Taxodium distichum) trees monthly, for over four years, to examine the inter-relationships among growth, site fertility, and soil physico-chemical characteristics. We found that salinity, soil total nitrogen (TN), flood duration, and flood frequency affected forest structure and growth the greatest. While mean annual site salinity ranged from 0.1 to 3.4 ppt, sites with salinity concentrations of 1.3 ppt or greater supported a basal area of less than 40 m2/ha. Where salinity was < 0.7 ppt, basal area was as high as 87 m2/ha. Stand height was also negatively affected by higher salinity. However, salinity related only to soil TN concentrations or to the relative balance between soil TN and total phosphorus (TP), which reached a maximum concentration between 1.2 and 2.0 ppt salinity. As estuarine influence shifts inland with sea-level rise, forest growth may become more strongly linked to salinity, not only due to salt effects but also as a consequence of site nitrogen imbalance.

Earthquake-induced soft-sediment deformations and seismically amplified erosion rates recorded in varved sediments of Köyceğiz Lake (SW Turkey)

KAUST Repository

Avsar, Ulas; Jonsson, Sigurjon; Avşar, Ö zgü r; Schmidt, Sabine

2016-01-01

sequence of Köyceğiz Lake (SW Turkey) that we compare with estimated peak ground acceleration (PGA) values of several nearby earthquakes. We find that earthquakes exceeding estimated PGA values of ca. 20 cm/s2 can induce soft-sediment deformations (SSD

Marine meiofauna, carbon and nitrogen mineralization in sandy and soft sediments of Disko Bay, West Greenland

DEFF Research Database (Denmark)

Rysgaard, S.; Christensen, P.B.; Sørensen, Martin Vinther

2000-01-01

Organic carbon mineralization was studied in a shallow-water (4 m), sandy sediment and 2 comparatively deep-water (150 and 300 m), soft sediments in Disko Bay, West Greenland. Benthic microalgae inhabiting the shallow-water locality significantly affected diurnal O-2 conditions within the surface...... is regulated primarily by the availability of organic matter and not by temperature. The shallow-water sediment contained a larger meiofauna population than the deep-water muddy sediments. Crustacean nauplia dominated the upper 9 mm while nematodes dominated below. A typical interstitial fauna of species...... layers of the sediment. Algal photosynthetic activity and nitrogen uptake reduced nitrogen effluxes and denitrification rates. Sulfate reduction was the most important pathway for carbon mineralization in the sediments of the shallow-water station. In contrast, high bottom-water NO3- concentrations...

Understanding the Influence of Retention Basin on Tidal Dynamics in Tidal Estuaries

Science.gov (United States)

Kumar, Mohit; Schuttelaars, Henk; Roos, Pieter

2014-05-01

Both the tidal motion and suspended sediment concentration (SSC) in tidal embayments and estuaries are influenced by anthropogenic (e.g. deepening ) and natural changes. An example of such an estuary is the Ems estuary, situated on the border of the Netherlands and Germany. The mean tidal range towards the end of the Ems estuary has increased from 1.5m in the 1950s to more than 3m in the 1990s while the suspended concentration has increased by a factor 10. To possibly reduce these negative effects, the construction of retention basin(s) (RB) is considered. In this contribution, the influence of location and geometry of RBs on tidal dynamics and SSC is investigated. For this purpose, a three-dimensional semi-analytic idealized model is developed. This model is an extension of the model proposed by Winant (2007) to arbitrary domain and realistic bathymetry with partial slip boundary condition at the bottom. The sea surface elevation (SSE) is calculated numerically using a finite element method. Next, the three-dimensional velocities are calculated by combining the analytically calculated vertical profiles and the gradients of the SSE which are obtained numerically. Firstly, the influence of a RB on the tidal dynamics in an infinitely long, rectangular, frictionless estuary is considered. The SSE decreases when the RB is located between a node and a landward antinode, consistent with the work of Alebregtse et al. (2013). Secondly, an estuary of finite length is connected to a sea. By varying the width of the sea, not only the effect of the distance of the RB to the landward end plays a role, but also the distance to the open sea becomes important. Finally, we discuss the influence of a RB on the tidal motion and initial sediment transport, considering the Ems estuary with realistic bathymetry. Results show that the SSE at the landward end of the Ems estuary decreases for all locations of the RBs. This decrease is most pronounced for the RB which is closest to the end

Colonies of Gyrosigma eximium: a new phenomenon in Arctic tidal flats

Directory of Open Access Journals (Sweden)

Józef Wiktor

2016-10-01

Full Text Available For the first time at Svalbard, a colonial form of the tube-dwelling diatom Gyrosigma eximium was found in summer 2010 in the tidal flats on Spitsbergen at 78°N. The colonies take the form of conical, green structures that are 1–2 cm high and are associated with other diatom taxa and cyanobacteria (Oscillatoriaceae. The diatom colonies were associated with rich meiofauna and apparently act as cohesive factors for the fine sediment. In the Arctic tidal flats, this represents the first observation of long-term sediment stabilization and biological enrichment. Since this first observation, this species has apparently colonized broader areas in Advenentelva's tidal flat.

River suspended sediment estimation by climatic variables implication: Comparative study among soft computing techniques

Science.gov (United States)

Kisi, Ozgur; Shiri, Jalal

2012-06-01

Estimating sediment volume carried by a river is an important issue in water resources engineering. This paper compares the accuracy of three different soft computing methods, Artificial Neural Networks (ANNs), Adaptive Neuro-Fuzzy Inference System (ANFIS), and Gene Expression Programming (GEP), in estimating daily suspended sediment concentration on rivers by using hydro-meteorological data. The daily rainfall, streamflow and suspended sediment concentration data from Eel River near Dos Rios, at California, USA are used as a case study. The comparison results indicate that the GEP model performs better than the other models in daily suspended sediment concentration estimation for the particular data sets used in this study. Levenberg-Marquardt, conjugate gradient and gradient descent training algorithms were used for the ANN models. Out of three algorithms, the Conjugate gradient algorithm was found to be better than the others.

Land claim and loss of tidal flats in the Yangtze Estuary.

Science.gov (United States)

Chen, Ying; Dong, Jinwei; Xiao, Xiangming; Zhang, Min; Tian, Bo; Zhou, Yunxuan; Li, Bo; Ma, Zhijun

2016-04-01

Tidal flats play a critical role in supporting biodiversity and in providing ecosystem services but are rapidly disappearing because of human activities. The Yangtze Estuary is one of the world's largest alluvial estuaries and is adjacent to the most developed economic zone in China. Using the Yangtze Estuary as a study region, we developed an automatic algorithm to estimate tidal flat areas based on the Land Surface Water Index and the Normalized Difference Vegetation Index. The total area of tidal flats in the Yangtze Estuary has decreased by 36% over the past three decades, including a 38% reduction in saltmarshes and a 31% reduction in barren mudflats. Meanwhile, land claim has accumulated to 1077 km(2), a value that exceeds the area of the remaining tidal flats. We divided the Yangtze Estuary into Shanghai and Jiangsu areas, which differ in riverine sediment supply and tidal flat management patterns. Although land claim has accelerated in both areas, the decline in tidal flat area has been much greater in Jiangsu than in Shanghai because of abundant supplies of sediment and artificial siltation in the latter area. The results highlight the need for better coastal planning and management based on tidal flat dynamics.

Opportunistic Pathogens and Microbial Communities and Their Associations with Sediment Physical Parameters in Drinking Water Storage Tank Sediments

Science.gov (United States)

Qin, Ke; Struewing, Ian; Domingo, Jorge Santo; Lytle, Darren

2017-01-01

The occurrence and densities of opportunistic pathogens (OPs), the microbial community structure, and their associations with sediment elements from eight water storage tanks in Ohio, West Virginia, and Texas were investigated. The elemental composition of sediments was measured through X-ray fluorescence (XRF) spectra. The occurrence and densities of OPs and amoeba hosts (i.e., Legionella spp. and L. pneumophila, Mycobacterium spp., P. aeruginosa, V. vermiformis, Acanthamoeba spp.) were determined using genus- or species-specific qPCR assays. Microbial community analysis was performed using next generation sequencing on the Illumina Miseq platform. Mycobacterium spp. were most frequently detected in the sediments and water samples (88% and 88%), followed by Legionella spp. (50% and 50%), Acanthamoeba spp. (63% and 13%), V. vermiformis (50% and 25%), and P. aeruginosa (0 and 50%) by qPCR method. Comamonadaceae (22.8%), Sphingomonadaceae (10.3%), and Oxalobacteraceae (10.1%) were the most dominant families by sequencing method. Microbial communities in water samples were mostly separated with those in sediment samples, suggesting differences of communities between two matrices even in the same location. There were associations of OPs with microbial communities. Both OPs and microbial community structures were positively associated with some elements (Al and K) in sediments mainly from pipe material corrosions. Opportunistic pathogens presented in both water and sediments, and the latter could act as a reservoir of microbial contamination. There appears to be an association between potential opportunistic pathogens and microbial community structures. These microbial communities may be influenced by constituents within storage tank sediments. The results imply that compositions of microbial community and elements may influence and indicate microbial water quality and pipeline corrosion, and that these constituents may be important for optimal storage tank management

Tidal power

International Nuclear Information System (INIS)

Baker, A.C.

1991-01-01

This book describes how large tides develop in particular places and how the energy could be extracted by building suitable barrages. The principal features of a barrage and possible methods of operation are described in detail. Although a tidal power barrage would be non-polluting, the resulting changes in the tidal regime would have important environmental effects. These are discussed together with the economics of tidal power. Methods of assessing the likely cost of electricity from any site are set out and applied to possible sites around the world. (author)

Recolonization of macrozoobenthos on defaunated sediments in a hypertrophic brackish lagoon: effects of sulfide removal and sediment grain size.

Science.gov (United States)

Kanaya, Gen

2014-04-01

Influences of sediment types on recolonization of estuarine macrozoobenthos were tested using enclosures in a hypertrophic lagoon. Three types of azoic sediment, sand (S), sulfide-rich mud (M), and mud removed of sulfide through iron addition (MFe), were set in field for 35 days during a hypoxic period. A total of 14 taxa including opportunistic polychaetes and amphipods occurred. Infaunal community in S treatment was characterized by highest diversity, total density and biomass, and population density of five dominant taxa, while those parameters were lowest in M treatment. Sulfide removal in MFe treatment achieved much higher density, biomass, and population densities of several taxa in the sediment. Multivariate analyses demonstrated that the established community structure was unique to each treatment. These imply that dissolved sulfide level as well as sediment grain size is a key determinant for the community composition and recolonization speed of early colonists in estuarine soft-bottom habitats. Copyright © 2014 Elsevier Ltd. All rights reserved.

Non-linearities in Holocene floodplain sediment storage

Science.gov (United States)

Notebaert, Bastiaan; Nils, Broothaerts; Jean-François, Berger; Gert, Verstraeten

2013-04-01

Floodplain sediment storage is an important part of the sediment cascade model, buffering sediment delivery between hillslopes and oceans, which is hitherto not fully quantified in contrast to other global sediment budget components. Quantification and dating of floodplain sediment storage is data and financially demanding, limiting contemporary estimates for larger spatial units to simple linear extrapolations from a number of smaller catchments. In this paper we will present non-linearities in both space and time for floodplain sediment budgets in three different catchments. Holocene floodplain sediments of the Dijle catchment in the Belgian loess region, show a clear distinction between morphological stages: early Holocene peat accumulation, followed by mineral floodplain aggradation from the start of the agricultural period on. Contrary to previous assumptions, detailed dating of this morphological change at different shows an important non-linearity in geomorphologic changes of the floodplain, both between and within cross sections. A second example comes from the Pre-Alpine French Valdaine region, where non-linearities and complex system behavior exists between (temporal) patterns of soil erosion and floodplain sediment deposition. In this region Holocene floodplain deposition is characterized by different cut-and-fill phases. The quantification of these different phases shows a complicated image of increasing and decreasing floodplain sediment storage, which hampers the image of increasing sediment accumulation over time. Although fill stages may correspond with large quantities of deposited sediment and traditionally calculated sedimentation rates for such stages are high, they do not necessary correspond with a long-term net increase in floodplain deposition. A third example is based on the floodplain sediment storage in the Amblève catchment, located in the Belgian Ardennes uplands. Detailed floodplain sediment quantification for this catchments shows

On the possibility of high-velocity tidal sterams as dynamic barriers to longshore sediment transport: evidence from the continental shelf off the Gulf of Kutch, India

Digital Repository Service at National Institute of Oceanography (India)

Nair, R.R.; Hashimi, N.H.; Rao, V.P

and clay minerals. The distinct differences have resulted because the high-velocity (2 to 2.5 knots) tidal stream at the gulf mouth acts as a dynamic barrier inhibiting sediment transport across the month. Differences in the distribution of sand size...

Influence of tidal regime on the distribution of trace metals in a contaminated tidal freshwater marsh soil colonized with common reed (Phragmites australis)

International Nuclear Information System (INIS)

Teuchies, J.; Deckere, E. de; Bervoets, L.; Meynendonckx, J.; Regenmortel, S. van; Blust, R.; Meire, P.

2008-01-01

A historical input of trace metals into tidal marshes fringing the river Scheldt may be a cause for concern. Nevertheless, the specific physicochemical form, rather than the total concentration, determines the ecotoxicological risk of metals in the soil. In this study the effect of tidal regime on the distribution of trace metals in different compartments of the soil was investigated. As, Cd, Cu and Zn concentrations in sediment, pore water and in roots were determined along a depth profile. Total sediment metal concentrations were similar at different sites, reflecting pollution history. Pore water metal concentrations were generally higher under less flooded conditions (mean is (2.32 ± 0.08) x 10 -3 mg Cd L -1 and (1.53 ± 0.03) x 10 -3 mg Cd L -1 ). Metal concentrations associated with roots (mean is 202.47 ± 2.83 mg Cd kg -1 and 69.39 ± 0.99 mg Cd kg -1 ) were up to 10 times higher than sediment (mean is 20.48 ± 0.19 mg Cd kg -1 and 20.42 ± 0.21 mg Cd kg -1 ) metal concentrations and higher under dryer conditions. Despite high metal concentrations associated with roots, the major part of the metals in the marsh soil is still associated with the sediment as the overall biomass of roots is small compared to the sediment. - Pore water metal concentrations and metal root plaque concentration are influenced by the tidal regime

Properties of active tidal bedforms

DEFF Research Database (Denmark)

Winter, Christian; Lefebvre, Alice; Becker, Marius

2016-01-01

Bedforms of various shapes and sizes are ubiquitous in tidal channels, inlets and estuaries. They constitute a form roughness which has a large scale effect on the hydrodynamics and sediment transport of coastal environments. It has been shown that this form roughness can be expressed in terms...

Effects of freshwater leaching on potential bioavailability of heavy metals in tidal flat soils.

Science.gov (United States)

Li, Hui; Lu, Jun; Li, Qu-Sheng; He, Bao-Yan; Mei, Xiu-Qin; Yu, Dan-Ping; Xu, Zhi-Min; Guo, Shi-Hong; Chen, Hui-Jun

2016-02-01

Leaching experiments were conducted to investigate the effects of desalination levels and sediment depths on potential bioavailability of heavy metal (Cd, Cr, Cu, Fe, Mn, Ni, Pb, and Zn) in tidal flat soils. The data showed that both the desalination levels (p soil depths (p toxicity to benthic organisms than high desalination treatment. Since these reclaimed tidal flats with low desalinisation are suitable for saline water aquaculture, transforming the present land use of reclaimed tidal flats from fresh water aquaculture into saline water aquaculture may reduce health risk of heavy metals remained in sediments. These results will also contribute to our understanding of the dynamic behavior of heavy metals in the reclamation of tidal flats during leaching and the role of the ratio of SEM/AVS predictions on assessing the ecological risks of reclaimed tidal flats.

Longitudinal variation in lateral trapping of fine sediment in tidal estuaries: observations and a 3D exploratory model

Science.gov (United States)

Chen, Wei; de Swart, Huib E.

2018-03-01

This study investigates the longitudinal variation of lateral entrapment of suspended sediment, as is observed in some tidal estuaries. In particular, field data from the Yangtze Estuary are analysed, which reveal that in one cross-section, two maxima of suspended sediment concentration (SSC) occur close to the south and north sides, while in a cross-section 2 km down-estuary, only one SSC maximum on the south side is present. This pattern is found during both spring tide and neap tide, which are characterised by different intensities of turbulence. To understand longitudinal variation in lateral trapping of sediment, results of a new three-dimensional exploratory model are analysed. The hydrodynamic part contains residual flow due to fresh water input, density gradients and Coriolis force and due to channel curvature-induced leakage. Moreover, the model includes a spatially varying eddy viscosity that accounts for variation of intensity of turbulence over the spring-neap cycle. By imposing morphodynamic equilibrium, the two-dimensional distribution of sediment in the domain is obtained analytically by a novel procedure. Results reveal that the occurrence of the SSC maxima near the south side of both cross-sections is due to sediment entrapment by lateral density gradients, while the second SSC maximum near the north side of the first cross-section is by sediment transport due to curvature-induced leakage. Coriolis deflection of longitudinal flow also contributes the trapping of sediment near the north side. This mechanism is important in the upper estuary, where the flow due to lateral density gradients is weak.

In situ erosion of cohesive sediment

International Nuclear Information System (INIS)

Williamson, H.J.; Ockenden, M.C.

1993-01-01

There has been increasing interest in tidal power schemes and the effect of a tidal energy barrage on the environment. A large man-made environmental change, such as a barrage, would be expected to have significant effects on the sediment distribution and stability of an estuary and these effects need to be assessed when considering a tidal barrage project. This report describes the development of apparatus for in-situ measurements of cohesive sediment erosion on inter-tidal mudflats. Development of the prototype field erosion bell and field testing was commissioned on behalf of the Department of Trade and Industry by the Energy Technology Support Unit (ETSU). This later work commenced in August 1991 and was completed in September 1992. (Author)

Hydrocarbon pollutants shape bacterial community assembly of harbor sediments

KAUST Repository

Barbato, Marta

2016-02-02

Petroleum pollution results in co-contamination by different classes of molecules, entailing the occurrence of marine sediments difficult to remediate, as in the case of the Ancona harbor (Mediterranean Sea, Italy). Autochthonous bioaugmentation (ABA), by exploiting the indigenous microbes of the environment to be treated, could represent a successful bioremediation strategy. In this perspective we aimed to i) identify the main drivers of the bacterial communities\\' richness in the sediments, ii) establish enrichment cultures with different hydrocarbon pollutants evaluating their effects on the bacterial communities\\' composition, and iii) obtain a collection of hydrocarbon degrading bacteria potentially exploitable in ABA. The correlation between the selection of different specialized bacterial populations and the type of pollutants was demonstrated by culture-independent analyses, and by establishing a collection of bacteria with different hydrocarbon degradation traits. Our observations indicate that pollution dictates the diversity of sediment bacterial communities and shapes the ABA potential in harbor sediments.

Seismically-induced soft-sediment deformation structures associated with the Magallanes-Fagnano Fault System (Isla Grande de Tierra del Fuego, Argentina)

Science.gov (United States)

Onorato, M. Romina; Perucca, Laura; Coronato, Andrea; Rabassa, Jorge; López, Ramiro

2016-10-01

In this paper, evidence of paleoearthquake-induced soft-sediment deformation structures associated with the Magallanes-Fagnano Fault System in the Isla Grande de Tierra del Fuego, southern Argentina, has been identified. Well-preserved soft-sediment deformation structures were found in a Holocene sequence of the Udaeta pond. These structures were analyzed in terms of their geometrical characteristics, deformation mechanism, driving force system and possible trigger agent. They were also grouped in different morphological types: sand dykes, convolute lamination, load structures and faulted soft-sediment deformation features. Udaeta, a small pond in Argentina Tierra del Fuego, is considered a Quaternary pull-apart basin related to the Magallanes-Fagnano Fault System. The recognition of these seismically-induced features is an essential tool for paleoseismic studies. Since the three main urban centers in the Tierra del Fuego province of Argentina (Ushuaia, Río Grande and Tolhuin) have undergone an explosive growth in recent years, the results of this study will hopefully contribute to future analyses of the seismic risk of the region.

Tidal regimes and salt marshes - the River Hamble analogue

International Nuclear Information System (INIS)

Gray, A.J.; Moy, I.L.; Warman, E.A.; Dawson, F.H.; Henville, P.

1993-01-01

Construction of estuarine tidal-energy barrages has a potentially major effect on the tidal regime of the estuary, particularly upstream of a barrage. Because tidal regime largely controls the distribution and species composition of intertidal plant and animal communities, it is important to understand how barrages may affect such communities. The main objectives of the research described in this report were to relate recent changes in tidal regime within an embanked area of salt marsh and mudflat to changes in the distribution of plant species. This was to test predictions about tidal control of species' range and to assess the site's suitability as an analogue of post-barrage conditions. (author)

Habitat modification drives benthic trophic diversity in an intertidal soft-bottom ecosystem

NARCIS (Netherlands)

van der Zee, E.M.; Tielens, E.; Holthuijsen, S.; Donadi, S.; Eriksson, B.K.; van der Veer, H.W.; Piersma, T.; Olff, H.; van der Heide, T.

2015-01-01

In intertidal soft-bottom ecosystems, ecosystem engineers such as reef-building bivalves, can strongly affect the associated benthic community by providing structure and stabilizing the sediment. Although several engineering species have declined dramatically in the past centuries, the consequences

Recent sediment dynamics in hadal trenches: Evidence for the influence of higher-frequency (tidal, near-inertial) fluid dynamics

Science.gov (United States)

Turnewitsch, Robert; Falahat, Saeed; Stehlikova, Jirina; Oguri, Kazumasa; Glud, Ronnie N.; Middelboe, Mathias; Kitazato, Hiroshi; Wenzhöfer, Frank; Ando, Kojiro; Fujio, Shinzou; Yanagimoto, Daigo

2014-08-01

In addition to high hydrostatic pressure, scarcity of food is viewed as a factor that limits the abundance and activity of heterotrophic organisms at great ocean depths, including hadal trenches. Supply of nutritious food largely relies on the flux of organic-rich particulate matter from the surface ocean. It has been speculated that the shape of hadal trenches helps to ‘funnel' particulate matter into the deeper parts of the trench, leading to sediment ‘focussing' and improved benthic food supply. Here we investigate for five Northwest Pacific trenches the efficiency of sediment focussing by evaluating ratios of measured (sediment-derived) and expected (water-column-derived) sedimentary inventories of the naturally occurring and radioactive particulate-matter tracer 210Pbxs. The sites comprise a broad range of surface-ocean productivity and physical-oceanographic regimes. Across the five trench-axis settings the inventory ratio varies between 0.5 and 4.1, with four trench-axis settings having ratios>1 (sediment focussing) and one trench-axis setting a ratiowinnowing). Although the fluid- and sediment-dynamical forcing behind sediment focussing remains unclear, this study finds evidence for another mechanism that is superimposed on, and counteracts, the focussing mechanism. This superimposed mechanism is related to higher-frequency (tidal, near-inertial) fluid dynamics. In particular, there is evidence for a strong and negative relation between the intensity of propagating internal tides and the extent of sediment focussing in the trench-axis. The relation can be approximated by a power function and the most intense drop in sediment focussing already occurs at moderate internal-tide intensities. This suggests that propagating internal tides may have a subtle but significant influence on particulate-matter dynamics and food supply in hadal trenches in particular, but possibly also in the deep seas in general. A mechanism for the influence of internal tides on

Review of sediment stabilisation techniques

International Nuclear Information System (INIS)

1992-01-01

The best sites for tidal power schemes are found in estuaries with high tidal ranges which have complex ecosystems and include a wide and diverse range of habitats. If the tidal power is to be developed, therefore, it is important to determine the likely effect on the environment and any ameliorative measures which may be necessary. One possible change is likely to be the erosion of material from the bed or shoreline of the estuary, and possibly the adjacent coast. This is of particular concern if intertidal sandflats, mudflats and saltmarsh are affected, as these are important wildlife habitats. Moreover, largescale movement of sediments would be undesirable. Results of a desk study of methods of preventing the erosion of sediment deposits in or near an estuary in the conditions that may occur following the construction of a tidal power barrage are presented. (author)

Bacterial community dynamic associated with autochthonous bioaugmentation for enhanced Cu phytoremediation of salt-marsh sediments.

Science.gov (United States)

Almeida, C Marisa R; Oliveira, Tânia; Reis, Izabela; Gomes, Carlos R; Mucha, Ana P

2017-12-01

Autochthonous bioaugmentation for metal phytoremediation is still little explored, particularly its application to estuarine salt marshes, but results obtained so far are promising. Nevertheless, understanding the behaviour of the microbial communities in the process of bioaugmentation and their role in improving metal phytoremediation is very important to fully validate the application of this biological technology. This study aimed to characterize the bacterial community dynamic associated with the application of autochthonous bioaugmentation in an experimentation which showed that Phragmites australis rhizosphere microorganisms could increase this salt marsh plant potential to phytoremediate Cu contaminated sediments. Bacterial communities present in the autochthonous microbial consortium resistant to Cu added to the medium and in the sediment at the beginning and at the end of the experiment were characterized by ARISA. Complementarily, the consortium and the sediment used for its production were characterized by next generation sequencing using the pyrosequencing platform 454. The microbial consortium resistant to Cu obtained from non-vegetated sediment was dominated by the genus Lactococcus (46%), Raoultella (25%), Bacillus (12%) and Acinetobacter (11%), whereas the one obtained form rhizosediment was dominated by the genus Gluconacetobacter (77%), Bacillus (17%) and Dyella (3%). Results clearly showed that, after two months of experiment, Cu caused a shift in the bacterial community structure of sediments, an effect that was observed either with or without addition of the metal resistant microbial consortium. Therefore, bioaugmentation application improved the process of phytoremediation (metal translocation by the plant was increased) without inducing long term changes in the bacterial community structure of the sediments. So, phytoremediation combined with autochthonous bioaugmentation can be a suitable technology for the recovery of estuarine areas

Initial formation of channels and shoals in a short tidal embayment

NARCIS (Netherlands)

Schuttelaars, H.M.; Swart, H.E. de

1997-01-01

It is demonstrated by using a simple model that bedforms in a short tidal embayment can develop due to a positive feedback between tidal currents sediment transport and bedforms The system is forced by a prescribed free surface elevations at the entrance of the embayment The water motions are

Algal stabilisation of estuarine sediments

International Nuclear Information System (INIS)

1992-01-01

The presence of benthic microalgae can increase the stability of intertidal sediments and influence sediment fluxes within an estuarine environment. Therefore the relative importance of algal stabilisation needs to be understood to help predict the effects of a tidal barrage. The objectives of this study are: to assess the significance of stabilisation of sediments by algae, in relation to the changes in hydrodynamic and sedimentological regimes arising from the construction of tidal power barrages; to identify a reliable and meaningful method of measuring the effectiveness, including duration, of algal binding on sediment stability, and to relate this method to other methods of measuring critical erosion velocity and sediment shear strength; to undertake a series of field experiments investigating the effect of algae on binding sediments and the parameters which could potentially influence such binding and to develop a predictive method for the assessment of sediment stabilisation by algal binding. This report contains plates, figures and tables. (author)

Historical Transition of Eco-Structure in a Tidal Flat Caused by Expansion of Sewerage Treatment Area

Directory of Open Access Journals (Sweden)

Hideki Tatsumoto

2004-01-01

Full Text Available An artificial tidal flat was prepared for the mitigation tool on coastal environment. However, it is considered that most of the flat was not restored to the sufficient amenities for aquatic living things, migratory birds, etc. because none of the ecological mechanisms were understood or planned for. It is therefore investigated in this paper that historical transition factors in ecosystem structure are selected and traced with the diffusion of a public sewerage system, and with environmental factors such as water quality, sediment condition, and aquatic producers in the Yatsu Tidal Flat. As a result, it can be defined that the tidal flat, just like a lagoon, was formed artificially with reclamation and development of its circumference at the first step of transition; the water quality and sediment condition gradually became brackish water and muddy sediment conditions, interactively. The ecosystem pyramid forming orderly layers according to trophic level appeared as a high-bio-production potential in its tidal flat. In the second step, i.e., in recent years, the characteristics of water quality and sediment conditions evolved into a foreshore tidal flat, namely, conditions in the flat observed were that the progression of water included a high concentration of chloride ion as seawater and sediment conditions became sandy. Because of that, the inflowing fresh water and organic mater from the land area decreased with the improvement of the public sewerage system. The ecosystem pyramid was distorted into a chaos pyramid, with inversion of Ulva spp.

Historical transition of eco-structure in a tidal flat caused by expansion of sewerage treatment area.

Science.gov (United States)

Tatsumoto, Hideki; Ishii, Yuichi; Machida, Motoi; Taki, Kazuo

2004-05-11

An artificial tidal flat was prepared for the mitigation tool on coastal environment. However, it is considered that most of the flat was not restored to the sufficient amenities for aquatic living things, migratory birds, etc. because none of the ecological mechanisms were understood or planned for. It is therefore investigated in this paper that historical transition factors in ecosystem structure are selected and traced with the diffusion of a public sewerage system, and with environmental factors such as water quality, sediment condition, and aquatic producers in the Yatsu Tidal Flat. As a result, it can be defined that the tidal flat, just like a lagoon, was formed artificially with reclamation and development of its circumference at the first step of transition; the water quality and sediment condition gradually became brackish water and muddy sediment conditions, interactively. The ecosystem pyramid forming orderly layers according to trophic level appeared as a high-bio-production potential in its tidal flat. In the second step, i.e., in recent years, the characteristics of water quality and sediment conditions evolved into a foreshore tidal flat, namely, conditions in the flat observed were that the progression of water included a high concentration of chloride ion as seawater and sediment conditions became sandy. Because of that, the inflowing fresh water and organic mater from the land area decreased with the improvement of the public sewerage system. The ecosystem pyramid was distorted into a chaos pyramid, with inversion of Ulva spp.

Observations of ebb flows on tidal flats: Evidence of dewatering?

Science.gov (United States)

Rinehimer, J. P.; Thomson, J. M.; Chickadel, C.

2010-12-01

Incised channels are a common morphological feature of tidal flats. When the flats are inundated, flows are generally forced by the tidally varying sea surface height. During low tide, however, these channels continue to drain throughout flat exposure even without an upstream source of water. While the role of porewater is generally overlooked due to the low permeability of marine muds, it remains the only potential source of flows through the channels during low tide. In situ and remotely sensed observations (Figure 1) at an incised channel on a tidal flat in Willapa Bay from Spring 2010 indicate that dewatering of the flats may be driving these low tide flows. High resolution Aquadopp ADCP velocity profiles are combined with observations from tower-based infrared (IR) video to produce a complete time series of surface velocity measurements throughout low tide. The IR video observations provide a measurement of surface currents even when the channel depth is below the blanking distance of the ADCP (10 cm). As the depth within the channel drops from 50 cm to 10 cm surface velocities increase from 10 cm/s to 60 cm/s even as the tide level drops below the channel flanks and the flats are dry. As the drainage continues, the temperature of the flow rises throughout low tide, mirroring temperatures within the sediment bed on the tidal flat. Drainage salinity falls despite the lack of any freshwater input to the flat indicating that less saline porewater may be the source. The likely source of the drainage water is from the channel flanks where time-lapse video shows slumping and compaction of channel sediments. Velocity profiles, in situ temperatures, and IR observations also are consistent with the presence of fluid muds and a hyperpycnal, density driven outflow at the channel mouth highlighting a possible pathway for sediment delivery from the flats to the main distributary channels of the bay. Figure 1: Time series of tidal flat channel velocities and temperatures

Mechanisms of Sediment Transport to an Abandoned Distributary Channel on the Huanghe (Yellow River) Delta, China

Science.gov (United States)

Kumpf, L. L.; Kineke, G. C.; Carlson, B.; Mullane, M.

2017-12-01

Avulsions on the fine-grained Huanghe delta have left it scarred with traces of abandoned distributary channels that become intertidal systems, open to water and sediment exchange with the sea. In 1996, an engineered avulsion of the Huanghe left a 30 km long abandoned channel to the south of the modern active river channel. Though all fluvial input was cut off, present-day sedimentation on the new tidal flats has been observed at rates around 2 cm/yr. The source must be suspended-sediment from the Bohai Sea conveyed by the tidal channel network, but the mechanisms promoting sediment import are unknown. Possible mechanisms include (A) import sourced from the sediment-rich buoyant coastal plume, (B) wave resuspension on the shallow shelf, (C) reverse-estuarine residual circulation in the tidal channel, and (D) tidal asymmetry in the channel. Over three summers, in situ measurements of current velocity, suspended-sediment concentration (SSC), and wave climate were made on the delta front, and measurements of velocity, SSC, and salinity were made within the tidal channel. Results suggest that the buoyant plume from the active Huanghe channel can transport sediment south toward the tidal channel mouth (A). Additionally, wave resuspension (B) takes place on the subaqueous topset beds when the significant wave height exceeds 1 m, providing potential sources of suspended-sediment to the tidal channel. Within the abandoned channel, the tidal channel can become hypersaline and exhibit reverse-estuarine circulation (C), which would promote import of turbid coastal water near the surface. Time-series of velocity in the tidal channel indicate that ebb currents are consistently higher than flood currents through the spring-neap cycle (D), with maximum velocities exceeding 1 m/s and corresponding maximum SSC reaching 2 g/L during spring tide. While ebb dominance would typically tend to flush the system of its sediment over time, sediment supplied to the tidal flats may not be

Removal efficiency of 75Se, 51Cr and 60Co from tidal water by mangrove sediments from Sepetiba Bay (SE Brazil)

International Nuclear Information System (INIS)

Suzuki, K.N.; Lopes, R.T.; Machado, E.C.; Machado, W.; Osso, J.A.Jr.

2014-01-01

Mangrove sediment cores sampled from Sepetiba Bay (SE Brazil) were covered with tidal water spiked with 75 Se, 51 Cr and 60 Co to evaluate the removal efficiency of these radiotracers by underlying sediments. Variable time-evolution trends were observed along 115 h experiments, with significant differences between removal efficiencies of all radiotracers observed only after 70 h ( 51 Cr > 60 Co > 75 Se). After an event of 60 Co release back to overlying water, there was a general trend of lower 60 Co removal than observed for other radiotracers during the period from 20 to 54 h. After this event, alternated periods of higher 60 Co and higher 75 Se removal trends were observed, attributed to behavioural differences expected for such anionic and cationic radiotracers. While 75 Se and 51 Cr showed uniform time-evolution curves, as typically found in the literature for most radiotracers, 60 Co removal rates presented oscillations, probably due to sensitivity to changes in redox conditions within underlying sediments. Results evidenced the role of mangrove sediments as trace element sinks, which have implications for coastal water quality and for possible uses of such sediments in wastewater treatment systems. (author)

Suspended sediment and sediment-associated contaminants in San Francisco Bay

Science.gov (United States)

Schoellhamer, D.H.; Mumley, T.E.; Leatherbarrow, J.E.

2007-01-01

Water-quality managers desire information on the temporal and spatial variability of contaminant concentrations and the magnitudes of watershed and bed-sediment loads in San Francisco Bay. To help provide this information, the Regional Monitoring Program for Trace Substances in the San Francisco Estuary (RMP) takes advantage of the association of many contaminants with sediment particles by continuously measuring suspended-sediment concentration (SSC), which is an accurate, less costly, and more easily measured surrogate for several trace metals and organic contaminants. Continuous time series of SSC are collected at several sites in the Bay. Although semidiurnal and diurnal tidal fluctuations are present, most of the variability of SSC occurs at fortnightly, monthly, and semiannual tidal time scales. A seasonal cycle of sediment inflow, wind-wave resuspension, and winnowing of fine sediment also is observed. SSC and, thus, sediment-associated contaminants tend to be greater in shallower water, at the landward ends of the Bay, and in several localized estuarine turbidity maxima. Although understanding of sediment transport has improved in the first 10 years of the RMP, determining a simple mass budget of sediment or associated contaminants is confounded by uncertainties regarding sediment flux at boundaries, change in bed-sediment storage, and appropriate modeling techniques. Nevertheless, management of sediment-associated contaminants has improved greatly. Better understanding of sediment and sediment-associated contaminants in the Bay is of great interest to evaluate the value of control actions taken and the need for additional controls. ?? 2007 Elsevier Inc. All rights reserved.

A coupled geomorphic and ecological model of tidal marsh evolution.

Science.gov (United States)

Kirwan, Matthew L; Murray, A Brad

2007-04-10

The evolution of tidal marsh platforms and interwoven channel networks cannot be addressed without treating the two-way interactions that link biological and physical processes. We have developed a 3D model of tidal marsh accretion and channel network development that couples physical sediment transport processes with vegetation biomass productivity. Tidal flow tends to cause erosion, whereas vegetation biomass, a function of bed surface depth below high tide, influences the rate of sediment deposition and slope-driven transport processes such as creek bank slumping. With a steady, moderate rise in sea level, the model builds a marsh platform and channel network with accretion rates everywhere equal to the rate of sea-level rise, meaning water depths and biological productivity remain temporally constant. An increase in the rate of sea-level rise, or a reduction in sediment supply, causes marsh-surface depths, biomass productivity, and deposition rates to increase while simultaneously causing the channel network to expand. Vegetation on the marsh platform can promote a metastable equilibrium where the platform maintains elevation relative to a rapidly rising sea level, although disturbance to vegetation could cause irreversible loss of marsh habitat.

The impacts of land reclamation on suspended-sediment dynamics in Jiaozhou Bay, Qingdao, China

Science.gov (United States)

Gao, Guan Dong; Wang, Xiao Hua; Bao, Xian Wen; Song, Dehai; Lin, Xiao Pei; Qiao, Lu Lu

2018-06-01

A three-dimensional, high-resolution tidal model coupled with the UNSW sediment model (UNSW-Sed) based on Finite Volume Coastal Ocean Model (FVCOM) was set up to study the suspended-sediment dynamics and its change in Jiaozhou Bay (JZB) due to land reclamation over the period 1935 to 2008. During the past decades, a large amount of tidal flats were lost due to land reclamation. Other than modulating the tides, the tidal flats are a primary source for sediment resuspensions, leading to turbidity maxima nearshore. The tidal dynamics are dominant in controlling the suspended-sediment dynamics in JZB and have experienced significant changes with the loss of tidal flats due to the land reclamation. The sediment model coupled with the tide model was used to investigate the changes in suspended-sediment dynamics due to the land reclamation from 1935 to 2008, including suspended-sediment concentrations (SSC) and the horizontal suspended-sediment fluxes. This model can predict the general patterns of the spatial and temporal variation of SSC. The model was applied to investigate how the net transport of suspended sediments between JZB and its adjacent sea areas changed with land reclamation: in 1935 the net movement of suspended sediments was from JZB to the adjacent sea (erosion for JZB), primarily caused by horizontal advection associated with a horizontal gradient in the SSC; This seaward transport (erosion for JZB) had gradually declined from 1935 to 2008. If land reclamation on a large scale is continued in future, the net transport between JZB and the adjacent sea would turn landward and JZB would switch from erosion to siltation due to the impact of land reclamation on the horizontal advection of suspended sediments. We also evaluate the primary physical mechanisms including advection of suspended sediments, settling lag and tidal asymmetry, which control the suspended-sediment dynamics with the process of land reclamation.

Investigation of microbial community structure in constructed mangrove microcosms receiving wastewater-borne polycyclic aromatic hydrocarbons (PAHs) and polybrominated diphenyl ethers (PBDEs)

International Nuclear Information System (INIS)

Wang, Ya-fen; Wu, Yan; Pi, Na; Tam, Nora Fung-yee

2014-01-01

The study aims to examine relationships between microbial community structure and mixed pollutants of polycyclic aromatic hydrocarbons (PAHs) and polybrominated diphenyl ethers (PBDEs) in constructed wetland microcosms, planted with Excoecaria agallocha or Kandelia obovata, two common mangrove plant species, and under two tidal regimes, everyday tidal (Te) and no tidal flooding (Tn). Results showed both microbial community structure and the retained amounts of pollutants were significantly determined by tidal regime, while the effect of plant species was small. Higher amounts of PAHs but lower amounts of PBDEs were always retained in sediments under Te than Tn regimes. Accordingly, temporal and vertical distributions of microbial community structure differed greatly between the two tidal regimes. Redundancy analysis further revealed significant correlation between a subgroup of the mixed PAHs and PBDEs with variation in microbial community structure. The findings will help to propose specific strategies to improve the bioremediation efficiency of constructed wetland. - Highlights: • We found synchronous degradation of PAHs and PBDEs in constructed mangrove microcosms. • Retained amounts of PAHs and PBDEs were determined mainly by tidal regime. • Tidal regime in turn significantly determined microbial community structure. • Variations of microbial EL-FAME profiles were more affected by PBDEs than PAHs. • Bap and BDE-154 were two most influential pollutants on microbial community structure. - Sedimentary microbial community structure was significantly determined by tidal regime, which in turn determined retained amounts of PAHs and PBDEs in constructed mangrove microcosms

Biodiversity of Trichoderma Community in the Tidal Flats and Wetland of Southeastern China.

Science.gov (United States)

Saravanakumar, Kandasamy; Yu, Chuanjin; Dou, Kai; Wang, Meng; Li, Yaqian; Chen, Jie

2016-01-01

To investigate the biodiversity of Trichoderma (Hypocreaceae) and their relation to sediment physical and chemical properties, we collected a total of 491 sediment samples from coastal wetlands (tidal flat and wetland) in Southeast China. Further, we applied two types of molecular approaches such as culture dependent and independent methods for identification of Trichoderma spp. A total of 254 isolates were obtained and identified to 13 species such as T. aureoviride, T. asperellum, T. harzianum, T. atroviride, T. koningiopsis, T. longibrachiatum, T. koningii. T. tawa, T. viridescens, T. virens, T. hamatum, T. viride, and T. velutinum by the culture-dependent (CD) method of these, T. tawa was newly described in China. Subsequently, the culture indepented method of 454 pyrosequencing analysis revealed a total of six species such as T. citrinoviride, T. virens, T. polysporum, T. harzianum/Hypocrea lixii and two unknown species. Notably, T. citrinoviride and T. polysporum were not found by the CD method. Therefore, this work revealed that the combination of these two methods could show the higher biodiversity of Trichoderma spp., than either of this method alone. Among the sampling sites, Hangzhou, Zhejiang Province, exhibited rich biodiversity and low in Fengxian. Correlation and Redundancy discriminant analysis (RDA) revealed that sediment properties of temperature, redox potential (Eh) and pH significantly influenced the biodiversity of Trichoderma spp.

Biodiversity of Trichoderma Community in the Tidal Flats and Wetland of Southeastern China

Science.gov (United States)

Saravanakumar, Kandasamy; Yu, Chuanjin; Dou, Kai; Wang, Meng; Li, Yaqian; Chen, Jie

2016-01-01

To investigate the biodiversity of Trichoderma (Hypocreaceae) and their relation to sediment physical and chemical properties, we collected a total of 491 sediment samples from coastal wetlands (tidal flat and wetland) in Southeast China. Further, we applied two types of molecular approaches such as culture dependent and independent methods for identification of Trichoderma spp. A total of 254 isolates were obtained and identified to 13 species such as T. aureoviride, T. asperellum, T. harzianum, T. atroviride, T. koningiopsis, T. longibrachiatum, T. koningii. T. tawa, T. viridescens, T. virens, T. hamatum, T. viride, and T. velutinum by the culture-dependent (CD) method of these, T. tawa was newly described in China. Subsequently, the culture indepented method of 454 pyrosequencing analysis revealed a total of six species such as T. citrinoviride, T. virens, T. polysporum, T. harzianum/Hypocrea lixii and two unknown species. Notably, T. citrinoviride and T. polysporum were not found by the CD method. Therefore, this work revealed that the combination of these two methods could show the higher biodiversity of Trichoderma spp., than either of this method alone. Among the sampling sites, Hangzhou, Zhejiang Province, exhibited rich biodiversity and low in Fengxian. Correlation and Redundancy discriminant analysis (RDA) revealed that sediment properties of temperature, redox potential (Eh) and pH significantly influenced the biodiversity of Trichoderma spp. PMID:28002436

Biodiversity of Trichoderma Community in the Tidal Flats and Wetland of Southeastern China.

Directory of Open Access Journals (Sweden)

Kandasamy Saravanakumar

Full Text Available To investigate the biodiversity of Trichoderma (Hypocreaceae and their relation to sediment physical and chemical properties, we collected a total of 491 sediment samples from coastal wetlands (tidal flat and wetland in Southeast China. Further, we applied two types of molecular approaches such as culture dependent and independent methods for identification of Trichoderma spp. A total of 254 isolates were obtained and identified to 13 species such as T. aureoviride, T. asperellum, T. harzianum, T. atroviride, T. koningiopsis, T. longibrachiatum, T. koningii. T. tawa, T. viridescens, T. virens, T. hamatum, T. viride, and T. velutinum by the culture-dependent (CD method of these, T. tawa was newly described in China. Subsequently, the culture indepented method of 454 pyrosequencing analysis revealed a total of six species such as T. citrinoviride, T. virens, T. polysporum, T. harzianum/Hypocrea lixii and two unknown species. Notably, T. citrinoviride and T. polysporum were not found by the CD method. Therefore, this work revealed that the combination of these two methods could show the higher biodiversity of Trichoderma spp., than either of this method alone. Among the sampling sites, Hangzhou, Zhejiang Province, exhibited rich biodiversity and low in Fengxian. Correlation and Redundancy discriminant analysis (RDA revealed that sediment properties of temperature, redox potential (Eh and pH significantly influenced the biodiversity of Trichoderma spp.

Understanding processes controlling sediment transports at the mouth of a highly energetic inlet system (San Francisco Bay, CA)

Science.gov (United States)

Elias, Edwin P.L.; Hansen, Jeff E.; Barnard, P.L.; Jaffee, B.E.; Schoellhamer, D.H.

2013-01-01

San Francisco Bay is one of the largest estuaries along the U.S. West Coast and is linked to the Pacific Ocean through the Golden Gate, a 100 m deep bedrock inlet. A coupled wave, flow and sediment transport model is used to quantify the sediment linkages between San Francisco Bay, the Golden Gate, and the adjacent open coast. Flow and sediment transport processes are investigated using an ensemble average of 24 climatologically derived wave cases and a 24.8 h representative tidal cycle. The model simulations show that within the inlet, flow and sediment transport is tidally dominated and driven by asymmetry of the ebb and flood tides. Peak ebb velocities exceed the peak flood velocities in the narrow Golden Gate channel as a result of flow convergence and acceleration. Persistent flow and sediment gyres at the headland tips are formed that limit sediment transfer from the ebb-tidal delta to the inlet and into the bay. The residual transport pattern in the inlet is dominated by a lateral segregation with a large ebb-dominant sediment transport (and flow) prevailing along the deeper north side of the Golden Gate channel, and smaller flood dominant transports along the shallow southern margin. The seaward edge of the ebb-tidal delta largely corresponds to the seaward extent of strong tidal flows. On the ebb-tidal delta, both waves and tidal forcing govern flow and sediment transport. Wave focusing by the ebb-tidal delta leads to strong patterns of sediment convergence and divergence along the adjacent Ocean Beach.

Effect of biostimulation on the microbial community in PCB-contaminated sediments through periodic amendment of sediment with iron.

Science.gov (United States)

Srinivasa Varadhan, A; Khodadoust, Amid P; Brenner, Richard C

2011-10-01

Reductive dehalogenation of polychlorinated biphenyls (PCBs) by indigenous dehalorespiring microorganisms in contaminated sediments may be enhanced via biostimulation by supplying hydrogen generated through the anaerobic corrosion of elemental iron added to the sediment. In this study, the effect of periodic amendment of sediment with various dosages of iron on the microbial community present in sediment was investigated using phospholipid fatty acid analysis (PLFA) over a period of 18 months. Three PCB-contaminated sediments (two freshwater lake sediments and one marine sediment) were used. Signature biomarker analysis of the microbial community present in all three sediments revealed the enrichment of Dehalococcoides species, the population of which was sustained for a longer period of time when the sediment microcosms were amended with the lower dosage of iron (0.01 g iron per g dry sediment) every 6 months as compared to the blank system (without iron). Lower microbial stress levels were reported for the system periodically amended with 0.01 g of iron per g dry sediment every 6 months, thus reducing the competition from other hydrogen-utilizing microorganisms like methanogens, iron reducers, and sulfate reducers. The concentration of hydrogen in the system was found to be an important factor influencing the shift in microbial communities in all sediments with time. Periodic amendment of sediment with larger dosages of iron every 3 months resulted in the early prevalence of Geobacteraceae and sulfate-reducing bacteria followed by methanogens. An average pH of 8.4 (range of 8.2-8.6) and an average hydrogen concentration of 0.75% (range of 0.3-1.2%) observed between 6 and 15 months of the study were found to be conducive to sustaining the population of Dehalococcoides species in the three sediments amended with 0.01 g iron per g dry sediment. Biostimulation of indigenous PCB dechlorinators by the periodic amendment of contaminated sediments with low dosages of

Estuaries as filters: the role of tidal marshes in trace metal removal.

Directory of Open Access Journals (Sweden)

Johannes Teuchies

Full Text Available Flux calculations demonstrate that many estuaries are natural filters for trace metals. Yet, the underlying processes are poorly investigated. In the present study, it was hypothesized that intertidal marshes contribute significantly to the contaminant filter function of estuaries. Trace metal concentrations and sediment characteristics were measured along a transect from the subtidal, over an intertidal flat and marsh to a restored marsh with controlled reduced tide. Metal concentrations in the intertidal and restored marsh were found to be a factor two to five higher than values in the subtidal and intertidal flat sediments. High metal concentrations and high accretion rates indicate a high metal accumulation capacity of the intertidal marshes. Overbank sedimentation in the tidal marshes of the entire estuary was calculated to remove 25% to 50% of the riverine metal influx, even though marshes comprise less than 8% of the total surface of the estuary. In addition, the large-scale implementation of planned tidal marsh restoration projects was estimated to almost double the trace metal storage capacity of the present natural tidal marshes in the estuary.

Estuaries as Filters: The Role of Tidal Marshes in Trace Metal Removal

Science.gov (United States)

Teuchies, Johannes; Vandenbruwaene, Wouter; Carpentier, Roos; Bervoets, Lieven; Temmerman, Stijn; Wang, Chen; Maris, Tom; Cox, Tom J. S.; Van Braeckel, Alexander; Meire, Patrick

2013-01-01

Flux calculations demonstrate that many estuaries are natural filters for trace metals. Yet, the underlying processes are poorly investigated. In the present study, it was hypothesized that intertidal marshes contribute significantly to the contaminant filter function of estuaries. Trace metal concentrations and sediment characteristics were measured along a transect from the subtidal, over an intertidal flat and marsh to a restored marsh with controlled reduced tide. Metal concentrations in the intertidal and restored marsh were found to be a factor two to five higher than values in the subtidal and intertidal flat sediments. High metal concentrations and high accretion rates indicate a high metal accumulation capacity of the intertidal marshes. Overbank sedimentation in the tidal marshes of the entire estuary was calculated to remove 25% to 50% of the riverine metal influx, even though marshes comprise less than 8% of the total surface of the estuary. In addition, the large-scale implementation of planned tidal marsh restoration projects was estimated to almost double the trace metal storage capacity of the present natural tidal marshes in the estuary. PMID:23950927

Soft-sediment deformation structures in cores from lacustrine slurry deposits of the Late Triassic Yanchang Fm. (central China

Directory of Open Access Journals (Sweden)

Yang Renchao

2016-09-01

Full Text Available The fine-grained autochthonous sedimentation in the deep part of a Late Triassic lake was frequently interrupted by gravity-induced mass flows. Some of these mass flows were so rich in water that they must have represented slurries. This can be deduced from the soft-sediment deformation structures that abound in cores from these lacustrine deposits which constitute the Yanchang Fm., which is present in the Ordos Basin (central China.

Flow Convergence Caused by a Salinity Minimum in a Tidal Channel

Directory of Open Access Journals (Sweden)

John C. Warner

2006-12-01

Full Text Available Residence times of dissolved substances and sedimentation rates in tidal channels are affected by residual (tidally averaged circulation patterns. One influence on these circulation patterns is the longitudinal density gradient. In most estuaries the longitudinal density gradient typically maintains a constant direction. However, a junction of tidal channels can create a local reversal (change in sign of the density gradient. This can occur due to a difference in the phase of tidal currents in each channel. In San Francisco Bay, the phasing of the currents at the junction of Mare Island Strait and Carquinez Strait produces a local salinity minimum in Mare Island Strait. At the location of a local salinity minimum the longitudinal density gradient reverses direction. This paper presents four numerical models that were used to investigate the circulation caused by the salinity minimum: (1 A simple one-dimensional (1D finite difference model demonstrates that a local salinity minimum is advected into Mare Island Strait from the junction with Carquinez Strait during flood tide. (2 A three-dimensional (3D hydrodynamic finite element model is used to compute the tidally averaged circulation in a channel that contains a salinity minimum (a change in the sign of the longitudinal density gradient and compares that to a channel that contains a longitudinal density gradient in a constant direction. The tidally averaged circulation produced by the salinity minimum is characterized by converging flow at the bed and diverging flow at the surface, whereas the circulation produced by the constant direction gradient is characterized by converging flow at the bed and downstream surface currents. These velocity fields are used to drive both a particle tracking and a sediment transport model. (3 A particle tracking model demonstrates a 30 percent increase in the residence time of neutrally buoyant particles transported through the salinity minimum, as compared to

Marine Subsurface Microbial Communities Across a Hydrothermal Gradient in Okinawa Trough Sediments

Science.gov (United States)

Brandt, L. D.; Hser Wah Saw, J.; Ettema, T.; House, C. H.

2015-12-01

IODP Expedition 331 to the Okinawa backarc basin provided an opportunity to study the microbial stratigraphy within the sediments surrounding a hydrothermal vent. The Okinawa backarc basin is a sedimented region of the seafloor located on a continental margin, and also hosts a hydrothermal network within the subsurface. Site C0014 within the Iheya North hydrothermal field is located 450 m east of the active vent and has a surface temperature of 5°C with no evidence of hydrothermal alteration within the top 10 meters below sea floor (mbsf). Temperature increases with depth at an estimated rate of 3°C/m and transitions from non-hydrothermal margin sediments to a hydrothermally altered regime below 10 mbsf. In this study, we utilized deep 16S rRNA sequencing of DNA from IODP Expedition 331 Site C0014 sediment horizons in order to assess diversity throughout the sediment column as well as determine the potential limits of the biosphere. Analysis of the amplicon data shows a shift over 15 mbsf from a heterogeneous community of cosmopolitan marine subsurface taxa toward an archaeal-dominated community in the deepest horizons of the predicted biosphere. Notably, the phylum Chloroflexi represents a substantial taxon through most horizons, where it appears to be replaced below 10 mbsf by punctuations of thermophilic and methanotrophic Archaea and Miscellaneous Crenarchaeotic Group abundances. DNA from the aforementioned transition horizons was further analyzed using metagenomic sequencing. Preliminary taxonomic analysis of the metagenomic data agrees well with amplicon data in capturing the shift in relative abundance of Archaea increasing with depth. Additionally, reverse gyrase, a gene found exclusively in hyperthermophilic microorganisms, was recovered only in the metagenome of the deepest horizon. A BLAST search of this protein sequence against the GenBank non-redudnant protein database produced top hits with reverse gyrase from Thermococcus and Pyrococcus, which are

Impact of vegetation die-off on spatial flow patterns over a tidal marsh

NARCIS (Netherlands)

Temmerman, S.; Moonen, P.; Schoelynck, J.; Govers, G.; Bouma, T.J.

2012-01-01

Large-scale die-off of tidal marsh vegetation, caused by global change, is expected to change flow patterns over tidal wetlands, and hence to affect valuable wetland functions such as reduction of shoreline erosion, attenuation of storm surges, and sedimentation in response to sea level rise. This

Planning for a National Community Sediment Transport Model

Science.gov (United States)

2002-01-01

modeling project. The workshop did not develop a NOPP proposal because NOPP had not yet announced funding opportunities for a coastal community modeling...2002, titled “NOPP / USGS Coastal Community Sediment-Transport Model”. Dr. Sherwood presented status reports at the NOPP Nearshore Annual meeting in

Benthic O-2 uptake of two cold-water coral communities estimated with the non-invasive eddy correlation technique

DEFF Research Database (Denmark)

Rovelli, Lorenzo; Attard, Karl M.; Bryant, Lee D.

2015-01-01

, was a channel-like sound in Northern Norway at a depth of 220 m. Both sites were characterized by the presence of live mounds of the reef framework-forming scleractinian Lophelia pertusa and reef-associated fauna such as sponges, crustaceans and other corals. The measured O-2 uptake at the 2 sites varied...... times higher than the global mean for soft sediment communities at comparable depths. The measurements document the importance of CWC communities for local and regional carbon cycling and demonstrate that the EC technique is a valuable tool for assessing rates of benthic O2 uptake in such complex...

PREFACE: International Symposium on Non-Equilibrium Soft Matter 2010 International Symposium on Non-Equilibrium Soft Matter 2010

Science.gov (United States)

Kawakatsu, T.; Matsuyama, A.; Ohta, T.; Tanaka, H.; Tanaka, S.

2011-07-01

Soft matter is a rapidly growing interdisciplinary research field covering a range of subject areas including physics, chemistry, biology, mathematics and engineering. Some of the important universal features of these materials are their mesoscopic structures and their dynamics. Due to the existence of such large-scale structures, which nevertheless exhibit interactions of the order of the thermal energy, soft matter can readily be taken out of equilibrium by imposing a weak external field such as an electric field, a mechanical stress or a shear flow. The importance of the coexistence of microscopic molecular dynamics and the mesoscopic/macroscopic structures and flows requires us to develop hierarchical approaches to understand the nonlinear and nonequilibrium phenomena, which is one of the central issues of current soft matter research. This special section presents selected contributions from the 'International Symposium on Non-Equilibrium Soft Matter 2010' held from 17-20 August 2010 in Nara, Japan, which aimed to describe recent advances in soft matter research focusing especially on its nonequilibrium aspects. The topics discussed cover statics and dynamics of a wide variety of materials ranging from traditional soft matter like polymers, gels, emulsions, liquid crystals and colloids to biomaterials such as biopolymers and biomembranes. Among these studies, we highlighted the physics of biomembranes and vesicles, which has attracted great attention during the last decade; we organized a special session for this active field. The work presented in this issue deals with (1) structure formation in biomembranes and vesicles, (2) rheology of polymers and gels, (3) mesophases in block copolymers, (4) mesoscopic structures in liquid crystals and ionic liquids, and (5) nonequilibrium dynamics. This symposium was organized as part of a research project supported by the Grant-in-Aid for the priority area 'Soft Matter Physics' (2006-2010) from the Ministry of Education

Short-term tidal asymmetry inversion in a macrotidal estuary (Beira, Mozambique)

Science.gov (United States)

Nzualo, Teodósio N. M.; Gallo, Marcos N.; Vinzon, Susana B.

2018-05-01

The distortion of the tide in estuaries, bays and coastal areas is the result of the generation of overtides due to the non-linear effects associated with friction, advection, and the finite effects of the tidal amplitude in shallow waters. The Beira estuary is classified as macrotidal, with a large ratio of S2/M2. Typical tides ranges from 6 m and 0.8 m, during springs and neaps tides, respectively. As a consequence of this large fortnightly tidal amplitude difference and the estuarine morphology, asymmetry inversions occur. Two types of tidal asymmetries were investigated in this paper, one considering tidal duration asymmetry (time difference between rising and falling tide) and the other, related to tidal velocity asymmetry (unequal magnitudes of flood and ebb peaks currents). In the Beira estuary when we examine the tidal duration asymmetry, flood dominance is observed during spring tide periods (negative time difference between rising and falling tide), while ebb dominance appears during neap tides (positive time difference between rising and falling tide). A 2DH hydrodynamic model was implemented to analyze this asymmetry inversion. The model was calibrated with water-level data measured at the Port of Beira and current data measured along the estuary. The model was run for different scenarios considering tidal constituents at the ocean boundary, river discharge and the morphology of the estuary. River discharge did not show significant effects on the tidal duration asymmetry. Through comparison of the scenarios, it was shown that the incoming ocean tide at the boundary has an ebb-dominant asymmetry, changing to flood-dominant only during spring tides due to the effect of shoaling and friction within the estuary. During neap tides, the propagation occurs mainly in the channels, and ebb dominance remains. The interplay between the estuary morphodynamics was thus identified and the relation between tidal duration asymmetry and tidal velocity asymmetry was

Coarse sediment oil persistence laboratory studies and model

International Nuclear Information System (INIS)

Humphrey, B.; Harper, J.R.

1993-01-01

To gain understanding of the factors which affect the fate of stranded oil on coarse sediment beaches, a series of oil penetration and tidal flushing experiments was conducted in columns containing sediments of two grain sizes: granules and pebbles. The experiments included changing oil properties by weathering and by emulsification. Factors examined included permeability, effective porosity, and residual capacity of the sediment for oil. The laboratory data provided input to an oil persistence model for coarse sediment beaches, and the model was modified on the basis of the new data. The permeability measurements suggest that the permeability of pebble/granule mixtures is close to that of the smaller component. For low viscosity oils, the permeability in coarse sediments is rapid enough to match the fall and rise of tidal water. Effective porosity of the pebbles was ca 90% of the measured porosity, but for both the granules and a 50-50 pebble/granule mixture, the effective porosity was ca 75% of measured porosity. Results of tidal flushing simulation imply that flushing may be rapid but not efficient. The emulsion completely entered the sediment in the case of pebbles only. 2 refs., 6 figs., 3 tabs

Evaluation of metals and hydrocarbons in sediments from a tropical tidal flat estuary of Southern Brazil

International Nuclear Information System (INIS)

Costa, Eduardo S.; Grilo, Caroline F.; Wolff, George A.; Thompson, Anu; Figueira, Rubens Cesar Lopes; Neto, Renato Rodrigues

2015-01-01

Highlights: • Metals and hydrocarbons in estuary mouth showed indication of anthropogenic input. • Metals in estuary mouth were associated with petroleum-derivative hydrocarbons. • Metals were possibly associated with activities that use oil and its derivatives. • Copper was associated with domestic sewage. - Abstract: Although the Passagem Channel estuary, Espírito Santo State, Brazil, is located in an urbanized and industrialized region, it has a large mangrove system. Here we examined natural and anthropogenic inputs that may influence trace metal (Cd, Cr, Cu, Ni, Sc, Pb and Zn) and hydrocarbon (n-alkane and terpane) deposition in three sediment cores collected in the tidal flat zone of the estuary. The cores were also analyzed for carbonate, grain size and stable isotopic composition (δ 13 C org. and δ 15 N total ). Metal enrichment and its association to petroleum hydrocarbons in the surficial sediments of one of the cores, indicate crude oil and derivative inputs, possibly from small vessels and road run-off from local heavy automobile traffic. At the landward sites, the major contributions for metals and hydrocarbons are from natural sources, but in one case, Cu may have been enriched by domestic effluent inputs

Hydrologically mediated iron reduction/oxidation fluctuations and dissolved organic carbon exports in tidal wetlands

Science.gov (United States)

Guimond, J. A.; Seyfferth, A.; Michael, H. A.

2017-12-01

Salt marshes are biogeochemical hotspots where large quantities of carbon are processed and stored. High primary productivity and deposition of carbon-laden sediment enable salt marsh soils to accumulate and store organic carbon. Conversely, salt marshes can laterally export carbon from the marsh platform to the tidal channel and eventually the ocean via tidal pumping. However, carbon export studies largely focus on tidal channels, missing key physical and biogeochemical mechanisms driving the mobilization of dissolved organic carbon (DOC) within the marsh platform and limiting our understanding of and ability to predict coastal carbon dynamics. We hypothesize that iron redox dynamics mediate the mobilization/immobilization of DOC in the top 30 cm of salt marsh sediment near tidal channels. The mobilized DOC can then diffuse into the flooded surface water or be advected to tidal channels. To elucidate DOC dynamics driven by iron redox cycles, we measured porewater DOC, Fe(II), total iron, total sulfate, pH, redox potential, and electrical conductivity (EC) beside the creek, at the marsh levee, and in the marsh interior in a mid-latitude tidal salt marsh in Dover, Delaware. Samples were collected at multiple tide stages during a spring and neap tide at depths of 5-75cm. Samples were also collected from the tidal channel. Continuous Eh measurements were made using in-situ electrodes. A prior study shows that DOC and Fe(II) concentrations vary spatially across the marsh. Redox conditions near the creek are affected by tidal oscillations. High tides saturate the soil and decrease redox potential, whereas at low tide, oxygen enters the sediment and increases the Eh. This pattern is always seen in the top 7-10cm of sediment, with more constant low Eh at depth. However, during neap tides, this signal penetrates deeper. Thus, between the creek and marsh levee, hydrology mediates redox conditions. Based on porewater chemistry, if DOC mobilization can be linked to redox

Turning the tide : tidal power in the UK

OpenAIRE

Sustainable Development Commission

2007-01-01

Contents: Turning the tide : tidal power in the UK -- Executive summary -- Tidal power in the UK : research report 1 : UK tidal resource assessment -- Tidal power in the UK : research report 2 : tidal technologies overview -- Tidal power in the UK : research report 3 : Severn barrage proposals -- Tidal power in the UK : research report 4 : Severn non-barrage options -- Tidal power in the UK : research report 5 : UK case studies. Summarised in the Welsh language version of the executive ...

Soft-sediment deformations (convolute lamination and load structures) in turbidites as indicators of flow reflections against bounding slopes

Science.gov (United States)

Tinterri, Roberto; Muzzi Magalhaes, Pierre; Tagliaferri, Alessio; Cunha, Rogerio S.; Laporta, Michele

2015-04-01

Soft-sediment deformations, such as convolute laminations, load structures and water escapes are very rapid deformations that occur in unconsolidated sediments near the depositional surface during or shortly after deposition and before significant diagenesis. These types of deformations develop when primary stratifications are deformed by a system of driving forces, while the sediment is temporarily in a weakened state due to the action of a deformation mechanism know as liquidization. This deformation occurs if the applied stress exceeds the sediment strength, either through an increase in the applied stress or through a temporary reduction in sediment strength. Liquidization mechanisms can be triggered by several agents, such as seismic shaking, rapid sedimentation with high-fallout rates or cyclic-pressure variations associated with storm waves or breaking waves. Consequently, soft-sediment deformations can be produced by different processes and form ubiquitous sedimentary structures characterizing many sedimentary environments. However, even though these types of structures are relatively well-known in terms of geometry and sedimentary characteristics, many doubts arise when the understanding of deformation and trigger mechanisms is attempted. As stressed also by the recent literature, the main problem lies in the fact that the existing approaches for the identification of triggering agents rely on criteria that are not diagnostic or not applicable to outcrop-based studies, because they are not always based on detailed facies analysis related to a paleoenvironmental-context approach. For this reason, this work discusses the significance of particular types of soft-sediment deformations that are very common in turbidite deposits, namely convolute laminations and load structures, especially on the basis of a deep knowledge of the stratigraphic framework and geological setting in which these structures are inserted. More precisely, detailed facies analyses of the

Environmental impact assessment of Kachchh tidal power project

International Nuclear Information System (INIS)

Yadav, Ramanand; Lal, B.B.

1995-01-01

The Kachchh tidal power development project is a single-basin, single -effect and ebb generation development by construction of a tidal power barrage of about 3.25 km length across Hansthal creek. The project may disturb the ecosystem of the region. The paper deals in detail the environmental impacts of the project on climate, water velocity, flow and sedimentation pattern, water quality, flora and fauna, fishery, tourism and recreation, wild life, public health and socio-economic conditions. (author). 4 refs., 1 fig., 2 tabs

Review of sediment stabilisation techniques. Final report

Energy Technology Data Exchange (ETDEWEB)

1992-12-31

The best sites for tidal power schemes are found in estuaries with high tidal ranges which have complex ecosystems and include a wide and diverse range of habitats. If the tidal power is to be developed, therefore, it is important to determine the likely effect on the environment and any ameliorative measures which may be necessary. One possible change is likely to be the erosion of material from the bed or shoreline of the estuary, and possibly the adjacent coast. This is of particular concern if intertidal sandflats, mudflats and saltmarsh are affected, as these are important wildlife habitats. Moreover, largescale movement of sediments would be undesirable. Results of a desk study of methods of preventing the erosion of sediment deposits in or near an estuary in the conditions that may occur following the construction of a tidal power barrage are presented. (author).

Predicting long-term and short-term tidal flat morphodynamics using a dynamic equilibrium theory

NARCIS (Netherlands)

Hu, Z.; Wang, Z.B.; Zitman, T.J.; Stive, M.J.F.; Bouma, T.J.

2015-01-01

Dynamic equilibrium theory is a fruitful concept, which we use to systematically explain the tidal flat morphodynamic response to tidal currents, wind waves, sediment supply, and other sedimentological drivers. This theory stems from a simple analytical model that derives the tide- or wave-dominated

Sediment sorting along tidal sand waves: A comparison between field observations and theoretical predictions

Science.gov (United States)

Van Oyen, Tomas; Blondeaux, Paolo; Van den Eynde, Dries

2013-07-01

A site-by-site comparison between field observations and theoretical predictions of sediment sorting patterns along tidal sand waves is performed for ten locations in the North Sea. At each site, the observed grain size distribution along the bottom topography and the geometry of the bed forms is described in detail and the procedure used to obtain the model parameters is summarized. The model appears to accurately describe the wavelength of the observed sand waves for the majority of the locations; still providing a reliable estimate for the other sites. In addition, it is found that for seven out of the ten locations, the qualitative sorting process provided by the model agrees with the observed grain size distribution. A discussion of the site-by-site comparison is provided which, taking into account uncertainties in the field data, indicates that the model grasps the major part of the key processes controlling the phenomenon.

Multifractal Analysis of Seismically Induced Soft-Sediment Deformation Structures Imaged by X-Ray Computed Tomography

Science.gov (United States)

Nakashima, Yoshito; Komatsubara, Junko

Unconsolidated soft sediments deform and mix complexly by seismically induced fluidization. Such geological soft-sediment deformation structures (SSDSs) recorded in boring cores were imaged by X-ray computed tomography (CT), which enables visualization of the inhomogeneous spatial distribution of iron-bearing mineral grains as strong X-ray absorbers in the deformed strata. Multifractal analysis was applied to the two-dimensional (2D) CT images with various degrees of deformation and mixing. The results show that the distribution of the iron-bearing mineral grains is multifractal for less deformed/mixed strata and almost monofractal for fully mixed (i.e. almost homogenized) strata. Computer simulations of deformation of real and synthetic digital images were performed using the egg-beater flow model. The simulations successfully reproduced the transformation from the multifractal spectra into almost monofractal spectra (i.e. almost convergence on a single point) with an increase in deformation/mixing intensity. The present study demonstrates that multifractal analysis coupled with X-ray CT and the mixing flow model is useful to quantify the complexity of seismically induced SSDSs, standing as a novel method for the evaluation of cores for seismic risk assessment.

Predominant Nearshore Sediment Dispersal Patterns in Manila Bay

Directory of Open Access Journals (Sweden)

Fernando Siringan

1997-12-01

Full Text Available Net nearshore sediment drift patterns in Manila Bay were determined by combining the coastal geomorphology depicted in 1 : 50,000scale topographic maps and Synthetic Aperture Radar (SAR images, with changes in shoreline position and predominant longshore current directions derived from the interaction of locally generated waves and bay morphology.Manila Bay is fringed by a variety of coastal subenvironments that reflect changing balances of fluvial, wave, and tidal processes. Along the northern coast, a broad tidal-river delta plain stretching from Bataan to Bulacan indicates the importance of tides, where the lateral extent of tidal influences is amplified by the very gentle coastal gradients. In contrast, along the Cavite coast sandy strandplains, spits, and wave-dominated deltas attest to the geomorphic importance of waves that enter the bay from the South China Sea.The estimates of net sediment drift derived from geomorphological, shoreline-change, and meteorological information are generally in good agreement. Sediment drift directions are predominantly to the northeast along Cavite, to the northwest along Manila and Bulacan, and to the north along Bataan. Wave refraction and eddy formation at the tip of the Cavite Spit cause southwestward sediment drift along the coast from Zapote to Kawit. Geomorphology indicates that onshore-offshore sediment transport is probably more important than alongshore transport along the coast fronting the tidal delta plain of northern Manila Bay. Disagreements between the geomorphic-derived and predicted net sediment drift directions may be due to interactions of wave-generated longshore currents with wind- and tide-generated currents.

Gulf of Mexico Integrated Science - Tampa Bay Study - Characterization of Tidal Wetlands

Science.gov (United States)

McIvor, Carole

2005-01-01

Tidal wetlands in Tampa Bay, Florida, consist of mangrove forests and salt marshes. Wetlands buffer storm surges, provide fish and wildlife habitat, and enhance water quality through the removal of water-borne nutrients and contaminants. Substantial areas of both mangroves and salt marshes have been lost to agricultural, residential, and industrial development in this urban estuary. Wetlands researchers are characterizing the biological components of tidal wetlands and examining the physical factors such as salinity, tidal flushing, and sediment deposition that control the composition of tidal wetland habitats. Wetlands restoration is a priority of resource managers in Tampa Bay. Baseline studies such as these are needed for successful restoration planning and evaluation.

Sequential development of tidal ravinement surfaces in macro- to hypertidal estuaries with high volcaniclastic input: the Miocene Puerto Madryn Formation (Patagonia, Argentina)

Science.gov (United States)

Scasso, Roberto A.; Cuitiño, José I.

2017-08-01

The late Miocene beds of the Puerto Madryn Formation (Provincia del Chubut, Argentina) are formed by shallow marine and estuarine sediments. The latter include several tidal-channel infills well exposed on the cliffy coast of the Peninsula Valdés. The Bahía Punta Fósil and Cerro Olazábal paleochannels are end members of these tidal channels and show a fining-upward infilling starting with intraformational channel lag conglomerates above deeply erosional surfaces interpreted as fluvial ravinement surfaces (the erosion surface formed in the purely fluvial or the fluvially dominated part of the estuary, where erosion is driven by fluvial processes). These are overlain and eventually truncated (and suppressed) by the tidal ravinement surface (TRS), in turn covered with high-energy, bioclastic conglomerates mostly formed in the "tidally dominated/fluvially influenced" part of an estuary. Above, large straight or arcuate point bars with alternatively sandy/muddy seasonal beds and varying trace and body fossil contents were deposited from the freshwater fluvially dominated to saline-water tidally dominated part of the estuary. The upper channel infill is formed by cross-bedded sands with mud drapes and seaward-directed paleocurrents, together with barren, volcaniclastic sandy to muddy heterolithic seasonal rhythmites, both deposited in the fluvially dominated part of the estuary. Volcanic ash driven by the rivers after large explosive volcanic eruptions on land resulted in sedimentation rates as high as 0.9 m per year, preserving (through burial) the morphology of tidal channels and TRSs. The channel deposits were formed in a tide-dominated, macrotidal to hypertidal open estuary with well-developed TRSs resulting from strong tidal currents deeply scouring into the transgressive filling of the channels and eventually cutting the fluvial ravinement surface. The TRSs extended upstream to the inner part of the estuary during long periods of low sedimentation rates

Sedimentation and response to sea-level rise of a restored marsh with reduced tidal exchange: Comparison with a natural tidal marsh

Science.gov (United States)

Vandenbruwaene, W.; Maris, T.; Cahoon, D.R.; Meire, P.; Temmerman, S.

2011-01-01

Along coasts and estuaries, formerly embanked land is increasingly restored into tidal marshes in order to re-establish valuable ecosystem services, such as buffering against flooding. Along the Scheldt estuary (Belgium), tidal marshes are restored on embanked land by allowing a controlled reduced tide (CRT) into a constructed basin, through a culvert in the embankment. In this way tidal water levels are significantly lowered (ca. 3 m) so that a CRT marsh can develop on formerly embanked land with a ca. 3 m lower elevation than the natural tidal marshes. In this study we compared the long-term change in elevation (ΔE) within a CRT marsh and adjacent natural tidal marsh. Over a period of 4 years, the observed spatio-temporal variations in ΔE rate were related to variations in inundation depth, and this relationship was not significantly different for the CRT marsh and natural tidal marsh. A model was developed to simulate the ΔE over the next century. (1) Under a scenario without mean high water level (MHWL) rise in the estuary, the model shows that the marsh elevation-ΔE feedback that is typical for a natural tidal marsh (i.e. rising marsh elevation results in decreasing inundation depth and therefore a decreasing increase in elevation) is absent in the basin of the CRT marsh. This is because tidal exchange of water volumes between the estuary and CRT marsh are independent from the CRT marsh elevation but dependent on the culvert dimensions. Thus the volume of water entering the CRT remains constant regardless of the marsh elevation. Consequently the CRT MHWL follows the increase in CRT surface elevation, resulting after 75 years in a 2–2.5 times larger elevation gain in the CRT marsh, and a faster reduction of spatial elevation differences. (2) Under a scenario of constant MHWL rise (historical rate of 1.5 cm a-1), the equilibrium elevation (relative to MHWL) is 0.13 m lower in the CRT marsh and is reached almost 2 times faster. (3) Under a scenario of

Demographic variation in community-based MRSA skin and soft tissue infection in Auckland, New Zealand.

Science.gov (United States)

Ritchie, Stephen R; Fraser, John D; Libby, Eric; Morris, Arthur J; Rainey, Paul B; Thomas, Mark G

2011-04-15

To estimate the burden of skin and soft tissue infection caused by Staphylococcus aureus (S. aureus), and to determine the effects of ethnicity and age on the rate of skin and soft tissue due to MRSA in the Auckland community. We reviewed the culture and susceptibility results of all wound swabs processed by Auckland's only community microbiology laboratory in 2007. Demographic data for a random sample of 1000 people who had a wound swab collected and for all people from whom a methicillin-resistant S. aureus (MRSA) strain was isolated were obtained and compared to demographic data for the total population of Auckland. S. aureus was isolated from 23853/47047 (51%) wound swab cultures performed in 2007; the estimated annual incidence of S. aureus isolation from a wound swab was 1847/100,000 people; and the estimated annual incidence of MRSA isolation from a wound swab was 145/100,000 people. Maori and Pacific people had higher rates of non-multiresistant MRSA infection compared with New Zealand European and Asian people; elderly New Zealand European people had much higher rates of multiresistant MRSA infections compared with people from other ethnic groups. S. aureus is a very common cause of disease in the community and the incidence of infection with MRSA subtypes varies with ethnicity.

Soft system methodology and decision making in community planning system

OpenAIRE

Křupka, Jiří; Kašparová, Miloslava; Jirava, Pavel; Mandys, Jan; Ferynová, Lenka; Duplinský, Josef

2013-01-01

A model of community planning was defined in this paper. The model was designed for the city of Pardubice and works with real questionnaire research data sets in its evaluation phase. Questionnaires were submitted to fill users, providers and sponsors of social services. When creating the model was used Checkland’s soft system methodology. Also soft computing methods and decision trees were used to create the model. The model was implemented in the data mining tool IBM SPSS Modeler 14.

Organism-Sediment Interactions Govern Post-Hypoxia Recovery of Ecosystem Functioning

Science.gov (United States)

Van Colen, Carl; Rossi, Francesca; Montserrat, Francesc; Andersson, Maria G. I.; Gribsholt, Britta; Herman, Peter M. J.; Degraer, Steven; Vincx, Magda; Ysebaert, Tom; Middelburg, Jack J.

2012-01-01

Hypoxia represents one of the major causes of biodiversity and ecosystem functioning loss for coastal waters. Since eutrophication-induced hypoxic events are becoming increasingly frequent and intense, understanding the response of ecosystems to hypoxia is of primary importance to understand and predict the stability of ecosystem functioning. Such ecological stability may greatly depend on the recovery patterns of communities and the return time of the system properties associated to these patterns. Here, we have examined how the reassembly of a benthic community contributed to the recovery of ecosystem functioning following experimentally-induced hypoxia in a tidal flat. We demonstrate that organism-sediment interactions that depend on organism size and relate to mobility traits and sediment reworking capacities are generally more important than recovering species richness to set the return time of the measured sediment processes and properties. Specifically, increasing macrofauna bioturbation potential during community reassembly significantly contributed to the recovery of sediment processes and properties such as denitrification, bedload sediment transport, primary production and deep pore water ammonium concentration. Such bioturbation potential was due to the replacement of the small-sized organisms that recolonised at early stages by large-sized bioturbating organisms, which had a disproportionately stronger influence on sediment. This study suggests that the complete recovery of organism-sediment interactions is a necessary condition for ecosystem functioning recovery, and that such process requires long periods after disturbance due to the slow growth of juveniles into adult stages involved in these interactions. Consequently, repeated episodes of disturbance at intervals smaller than the time needed for the system to fully recover organism-sediment interactions may greatly impair the resilience of ecosystem functioning. PMID:23185440

Bacterial communities in sediment of a Mediterranean marine protected area.

Science.gov (United States)

Catania, Valentina; Sarà, Gianluca; Settanni, Luca; Quatrini, Paola

2017-04-01

Biodiversity is crucial in preservation of ecosystems, and bacterial communities play an indispensable role for the functioning of marine ecosystems. The Mediterranean marine protected area (MPA) "Capo Gallo-Isola delle Femmine" was instituted to preserve marine biodiversity. The bacterial diversity associated with MPA sediment was compared with that from sediment of an adjacent harbour exposed to intense nautical traffic. The MPA sediment showed higher diversity with respect to the impacted site. A 16S rDNA clone library of the MPA sediment allowed the identification of 7 phyla: Proteobacteria (78%), Firmicutes (11%), Acidobacteria (3%), Actinobacteria (3%), Bacteroidetes (2%), Planctomycetes (2%), and Cyanobacteria (1%). Analysis of the hydrocarbon (HC)-degrading bacteria was performed using enrichment cultures. Most of the MPA sediment isolates were affiliated with Gram-positive G+C rich bacteria, whereas the majority of taxa in the harbour sediment clustered with Alpha- and Gammaproteobacteria; no Gram-positive HC degraders were isolated from the harbour sediment. Our results show that protection probably has an influence on bacterial diversity, and suggest the importance of monitoring the effects of protection at microbial level as well. This study creates a baseline of data that can be used to assess changes over time in bacterial communities associated with a Mediterranean MPA.

Hydrocarbon Degradation in Caspian Sea Sediment Cores Subjected to Simulated Petroleum Seepage in a Newly Designed Sediment-Oil-Flow-Through System

Directory of Open Access Journals (Sweden)

Tina Treude

2017-04-01

Full Text Available The microbial community response to petroleum seepage was investigated in a whole round sediment core (16 cm length collected nearby natural hydrocarbon seepage structures in the Caspian Sea, using a newly developed Sediment-Oil-Flow-Through (SOFT system. Distinct redox zones established and migrated vertically in the core during the 190 days-long simulated petroleum seepage. Methanogenic petroleum degradation was indicated by an increase in methane concentration from 8 μM in an untreated core compared to 2300 μM in the lower sulfate-free zone of the SOFT core at the end of the experiment, accompanied by a respective decrease in the δ13C signal of methane from -33.7 to -49.5‰. The involvement of methanogens in petroleum degradation was further confirmed by methane production in enrichment cultures from SOFT sediment after the addition of hexadecane, methylnapthalene, toluene, and ethylbenzene. Petroleum degradation coupled to sulfate reduction was indicated by the increase of integrated sulfate reduction rates from 2.8 SO42-m-2 day-1 in untreated cores to 5.7 mmol SO42-m-2 day-1 in the SOFT core at the end of the experiment, accompanied by a respective accumulation of sulfide from 30 to 447 μM. Volatile hydrocarbons (C2–C6 n-alkanes passed through the methanogenic zone mostly unchanged and were depleted within the sulfate-reducing zone. The amount of heavier n-alkanes (C10–C38 decreased step-wise toward the top of the sediment core and a preferential degradation of shorter (C30 was seen during the seepage. This study illustrates, to the best of our knowledge, for the first time the development of methanogenic petroleum degradation and the succession of benthic microbial processes during petroleum passage in a whole round sediment core.

Hydrocarbon Degradation in Caspian Sea Sediment Cores Subjected to Simulated Petroleum Seepage in a Newly Designed Sediment-Oil-Flow-Through System.

Science.gov (United States)

Mishra, Sonakshi; Wefers, Peggy; Schmidt, Mark; Knittel, Katrin; Krüger, Martin; Stagars, Marion H; Treude, Tina

2017-01-01

The microbial community response to petroleum seepage was investigated in a whole round sediment core (16 cm length) collected nearby natural hydrocarbon seepage structures in the Caspian Sea, using a newly developed Sediment-Oil-Flow-Through (SOFT) system. Distinct redox zones established and migrated vertically in the core during the 190 days-long simulated petroleum seepage. Methanogenic petroleum degradation was indicated by an increase in methane concentration from 8 μM in an untreated core compared to 2300 μM in the lower sulfate-free zone of the SOFT core at the end of the experiment, accompanied by a respective decrease in the δ 13 C signal of methane from -33.7 to -49.5‰. The involvement of methanogens in petroleum degradation was further confirmed by methane production in enrichment cultures from SOFT sediment after the addition of hexadecane, methylnapthalene, toluene, and ethylbenzene. Petroleum degradation coupled to sulfate reduction was indicated by the increase of integrated sulfate reduction rates from 2.8 SO 4 2- m -2 day -1 in untreated cores to 5.7 mmol SO 4 2- m -2 day -1 in the SOFT core at the end of the experiment, accompanied by a respective accumulation of sulfide from 30 to 447 μM. Volatile hydrocarbons (C2-C6 n -alkanes) passed through the methanogenic zone mostly unchanged and were depleted within the sulfate-reducing zone. The amount of heavier n -alkanes (C10-C38) decreased step-wise toward the top of the sediment core and a preferential degradation of shorter (C30) was seen during the seepage. This study illustrates, to the best of our knowledge, for the first time the development of methanogenic petroleum degradation and the succession of benthic microbial processes during petroleum passage in a whole round sediment core.

On effects produced by tidal power plants upon environmental conditions in adjacent sea areas

International Nuclear Information System (INIS)

Nekrasov, A.V.; Romanenkov, D.A.

1997-01-01

Consideration is given to the change in natural (oceanographic) environmental conditions due to the transformation of the tidal oscillations structure resulting from erection and operation of tidal power plants (TPP). The relevant transformation of tidal movements encompasses practically all its main characteristics: amplitudes, phases and spectral composition of sea level oscillations, as well as the similar parameters of tidal currents and also the intensity and positioning of extremes zones. The changes in positioning and width of the inter-tidal zone, the inter-tidal zone regime, mutual arrangement of mixed, stratified and transient frontal zones, transportation of suspended matter and bottom sedimentation, owing to residual tidal currents, sea ice characteristics, air these changes can be estimated on the basis of mathematical predictive modelling of tidal characteristics transformed by a contemplated tidal power plant. Some results are presented for the Russian large-scale TPP projects in the White and Okhotsk seas. (author)

Prokaryotic community composition involved production of nitrogen in sediments of Mejillones Bay

International Nuclear Information System (INIS)

Moraga, Ruben; Galan, Alexander; Rosello-Mora, Ramon; Araya, Ruben; Valdes, Jorge

2014-01-01

Conventional denitrification and anaerobic ammonium oxidation (anammox) contributes to nitrogen loss in oxygen-deficient systems, thereby influencing many aspects of ecosystem function and global biogeochemistry. Mejillones Bay, northern Chile, presents ideal conditions to study nitrogen removal processes, because it is inserted in a coastal upwelling system, its sediments have anoxia and hypoxia conditions and under the influence of the Oxygen Minimum Zone (OMZ), unknown processes that occur there and what are the microbial communities responsible for their removal. Microbial communities associated with coastal sediments of Mejillones Bay were studied by denaturing gel electrophoresis (DGGE) and fluorescence in situ hybridization (FISH), by incubation experiments with 15 N isotope tracers were studied nitrogen loss processes operating in these sediments. DGGE analysis showed high bacterial diversity, certain redundant phylotypes and differences in community structure given by the depth; this reflects the microbial community adaptations to environmental conditions. A large fraction (up to 70%) of DAPI-stained cells hybridized with the bacterial probes. Nearly 52-90% of the cell could be further identified to know phyla. Members of the Cytophaga-Flavobacterium cluster were most abundant in the sediments (13-26%), followed by Proteobacteria. Isotopic tracer experiments for the sediments studied indicated that nitrogen loss processes that predominated were performed by denitrifying communities (43.31-111.20 μMd -1 ) was not possible to detect anammox in the area and not anammox bacteria were detected

Impact of the tidal power dam in the Rance estuary: geomorphological changes, hydrosedimentary processes and reconstructions plans

Science.gov (United States)

Susperregui, A.

2010-12-01

The Rance basin (France) offers potential to make a full-scale assessment of the environmental impact of a tidal power station after 50 years of operation. Consequences on biology, hydrodynamics and sedimentology were observed and nowadays, some of these changes are still acting on the natural system. The tidal dynamic was completely artificialised by the dam construction. The two main consequences are the reduction of exundation area and the extension of slack duration. Sedimentary dynamic depending on hydrodynamics conditions, changes in sediment distribution were also observed. Before the tidal power station construction, sands lined the gravel bed channel, recovered the bottom and formed beaches and banks. Coves and the upstream part of the estuary were dominated by a fine sedimentation, forming mudflats in a classical configuration slikke/schorre. Nowadays, mudflats extended to the center of the basin and all coves are occupied. The important inertia induced by the slack extension caused a slowing down on currents velocities, making easier the fine suspension deposit. The siltation is most important upstream, were the turbidity maximum was shifted, generating problems for navigation and banks access. A solution of sediment management was envisaged from 2001, by the digging of a sediments trap of 91 000 m3, near the Châtelier Lock. Sedimentation monitoring in this trap shows an intense filling over the first two years of functioning, then a slowing down leading to a complete filling from 2005. This trap also showed a beneficial interest on the sedimentation rates of the mudflats closed to it, which decreased. To understand how fine sediment is eroded and transported into this maritime area, an optical backscatter sensor was installed 1.5 km upstream of the tidal power station. During spring tides, the tidal power station functions in a “double-acting” cycle. This particular working leads to an important increase of turbidity during the artificial tidal

Non-equilibrium umbrella sampling applied to force spectroscopy of soft matter.

Science.gov (United States)

Gao, Y X; Wang, G M; Williams, D R M; Williams, Stephen R; Evans, Denis J; Sevick, E M

2012-02-07

Physical systems often respond on a timescale which is longer than that of the measurement. This is particularly true in soft matter where direct experimental measurement, for example in force spectroscopy, drives the soft system out of equilibrium and provides a non-equilibrium measure. Here we demonstrate experimentally for the first time that equilibrium physical quantities (such as the mean square displacement) can be obtained from non-equilibrium measurements via umbrella sampling. Our model experimental system is a bead fluctuating in a time-varying optical trap. We also show this for simulated force spectroscopy on a complex soft molecule--a piston-rotaxane.

The importance of benchmarking habitat structure and composition for understanding the extent of fishing impacts in soft sediment ecosystems

Science.gov (United States)

Handley, Sean J.; Willis, Trevor J.; Cole, Russell G.; Bradley, Anna; Cairney, Daniel J.; Brown, Stephen N.; Carter, Megan E.

2014-02-01

Trawling and dredge fisheries remove vulnerable fauna, homogenise sediments and assemblages, and break down biogenic habitats, but the full extent of these effects can be difficult to quantify in the absence of adequate control sites. Our study utilised rare control sites containing biogenic habitat, the Separation Point exclusion zone, formally protected for 28 years, as the basis for assessing the degree of change experienced by adjacent areas subject to benthic fishing. Sidescan sonar surveys verified that intensive trawling and dredging occurred in areas adjacent to, but not inside, the exclusion area. We compared sediment composition, biogenic cover, macrofaunal assemblages, biomass, and productivity of the benthos, inside and outside the exclusion zone. Disturbed sites were dominated by fine mud, with little or no shell-gravel, reduced number of species, and loss of large bodied animals, with concomitant reductions in biomass and productivity. At protected sites, large, rarer molluscs were more abundant and contributed the most to size-based estimates of productivity and biomass. Functional changes in fished assemblages were consistent with previously reported relative increases in scavengers, predators and deposit feeders at the expense of filter feeders and a grazer. We propose that the colonisation of biogenic species in protected sites was contingent on the presence of shell-gravel atop these soft sediments. The process of sediment homogenisation by bottom fishing and elimination of shell-gravels from surficial sediments appeared to have occurred over decades - a ‘shifting baseline’. Therefore, benchmarking historical sediment structure at control site like the Separation Point exclusion zone is necessary to determine the full extent of physical habitat change wrought by contact gears on sheltered soft sediment habitats to better underpin appropriate conservation, restoration or fisheries management goals.

A Synthesis of Environmental and Plant Community Data for Tidal Wetland Restoration Planning in the Lower Columbia River and Estuary

Energy Technology Data Exchange (ETDEWEB)

Diefenderfer, Heida L.; Borde, Amy B.; Cullinan, Valerie I.

2013-12-01

This report reanalyzes and synthesizes previously existing environmental and plant community data collected by PNNL at 55 tidal wetlands and 3 newly restored sites in the lower Columbia River and estuary (LCRE) between 2005 and 2011. Whereas data were originally collected for various research or monitoring objectives of five studies, the intent of this report is to provide only information that will have direct utility in planning tidal wetland restoration projects. Therefore, for this report, all tidal wetland data on plants and the physical environment, which were originally developed and reported by separate studies, were tabulated and reanalyzed as a whole. The geographic scope of the data collected in this report is from Bonneville Lock and Dam to the mouth of the Columbia River

Literature Review of Unconsolidated Sediment in San Francisco Bay and Nearby Pacific Ocean Coast

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Barry R. Keller

2009-09-01

Full Text Available A review of the geologic literature regarding sedimentation in the San Francisco Bay estuarine system shows that the main part of the bay occupies a structural tectonic depression that developed in Pleistocene time. Eastern parts, including San Pablo Bay and Suisun Bay, have had sedimentation throughout late Mesozoic and Tertiary. Carquinez Strait and the Golden Gate may represent antecedent stream erosion. Sedimentation has included estuarine, alluvial, and eolian deposition. The ages of estuarine deposition includes the modern high sea level stand and earlier Pleistocene interglacial periods. Sediment sources can be generally divided into the Coast Ranges, particularly the Franciscan Complex, and “Sierran.” Much of the estuarine system is floored by very fine sediment, with local areas of sand floor. Near the Golden Gate, sediment size decreases in both directions away from the deep channel. Bedforms include sand waves (submarine dunes, flat beds, and rock and boulders. These are interpreted in terms of dominant transport directions. Near the Golden Gate is an ebb-tidal delta on the outside (including San Francisco bar and a flood-tidal delta on the inside (parts of Central Bay. The large tidal prism causes strong tidal currents, which in the upper part of the estuary are normally much stronger than river currents, except during large floods. Cultural influences have altered conditions, including hydraulic mining debris, blasting of rocks, dredging of navigation channels, filling of the bay, and commercial sand mining. Many of these have served to decrease the tidal prism, correspondingly decreasing the strength of tidal currents.

The origin of neap-spring tidal cycles

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Kvale, E.P.

2006-01-01

The origin of oceanic tides is a basic concept taught in most introductory college-level sedimentology/geology, oceanography, and astronomy courses. Tides are typically explained in the context of the equilibrium tidal theory model. Yet this model does not take into account real tides in many parts of the world. Not only does the equilibrium tidal model fail to explicate amphidromic circulation, it also does not explain diurnal tides in low latitude positions. It likewise fails to explain the existence of tide-dominated areas where neap-spring cycles are synchronized with the 27.32-day orbital cycle of the Moon (tropical month), rather than with the more familiar 29.52-day cycle of lunar phases (synodic month). Both types of neap-spring cycles can be recognized in the rock record. A complete explanation of the origin of tides should include a discussion of dynamic tidal theory. In the dynamic tidal model, tides resulting from the motions of the Moon in its orbit around the Earth and the Earth in its orbit around the Sun are modeled as products of the combined effects of a series of phantom satellites. The movement of each of these satellites, relative to the Earth's equator, creates its own tidal wave that moves around an amphidromic point. Each of these waves is referred to as a tidal constituent. The geometries of the ocean basins determine which of these constituents are amplified. Thus, the tide-raising potential for any locality on Earth can be conceptualized as the result of a series of tidal constituents specific to that region. A better understanding of tidal cycles opens up remarkable opportunities for research on tidal deposits with implications for, among other things, a more complete understanding of the tidal dynamics responsible for sediment transport and deposition, changes in Earth-Moon distance through time, and the possible influences tidal cycles may exert on organisms. ?? 2006 Elsevier B.V. All rights reserved.

Soft-Sediment Deformation Structures Interpreted as Seismites in the Kolankaya Formation, Denizli Basin (SW Turkey)

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Topal, Savaş; Özkul, Mehmet

2014-01-01

The NW-trending Denizli basin of the SW Turkey is one of the neotectonic grabens in the Aegean extensional province. It is bounded by normal faults on both southern and northern margins. The basin is filled by Neogene and Quaternary terrestrial deposits. Late Miocene- Late Pliocene aged Kolankaya formation crops out along the NW trending Karakova uplift in the Denizli basin. It is a typical fluviolacustrine succession that thickens and coarsens upward, comprising poorly consolidated sand, gravelly sand, siltstone and marl. Various soft-sediment deformation structures occur in the formation, especially in fine- to medium grained sands, silts and marls: load structures, flame structures, clastic dikes (sand and gravely-sand dike), disturbed layers, laminated convolute beds, slumps and synsedimentary faulting. The deformation mechanism and driving force for the soft-sediment deformation are related essentially to gravitational instability, dewatering, liquefaction-liquidization, and brittle deformation. Field data and the wide lateral extent of the structures as well as regional geological data show that most of the deformation is related to seismicity and the structures are interpreted as seismites. The existence of seismites in the Kolankaya Formation is evidence for continuing tectonic activity in the study area during the Neogene and is consistent with the occurrence of the paleoearthquakes of magnitude >5. PMID:25152909

Avian communities in tidal salt marshes of San Francisco Bay: a review of functional groups by foraging guild and habitat association

Science.gov (United States)

Takekawa, John Y.; Woo, Isa; Gardiner, Rachel J.; Casazza, Michael L.; Ackerman, Joshua T.; Nur, Nadav; Liu, Leonard; Spautz, Hildie; Palaima, Arnas

2011-01-01

The San Francisco Bay estuary is highly urbanized, but it supports the largest remaining extent of tidal salt marshes on the west coast of North America as well as a diverse native bird community. San Francisco Bay tidal marshes are occupied by more than 113 bird species that represent 31 families, including five subspecies from three families that we denote as tidal-marsh obligates. To better identify the niche of bird species in tidal marshes, we present a review of functional groups based on foraging guilds and habitat associations. Foraging guilds describe the method by which species obtain food from tidal marshes, while habitat associations describe broad areas within the marsh that have similar environmental conditions. For example, the ubiquitous song sparrows (Alameda Melospiza melodia pusillula, Suisun M. m. maxillaris, and San Pablo M. m. samuelis) are surface-feeding generalists that consume prey from vegetation and the ground, and they are found across the entire marsh plain into the upland–marsh transition. In contrast, surface-feeding California black rails (Laterallus jamaicensis coturniculus) are cryptic, and generally restricted in their distribution to the mid- and high-marsh plain. Although in the same family, the endangered California clapper rail (Rallus longirostris obsoletus) has become highly specialized, foraging primarily on benthic fauna within marsh channels when they are exposed at low tide. Shorebirds such as the black-necked stilt (Himantopus mexicanus) typically probe in mud flats to consume macroinvertebrate prey, and are generally restricted to foraging on salt pans within the marsh plain, in ponds, or on mud flats during transitional stages of marsh evolution. The abundance and distribution of birds varies widely with changing water depths and vegetation colonization during different stages of restoration. Thus, tidal-marsh birds represent a rich and diverse community in bay marshes, with niches that may be distinguished by the

Will Restored Tidal Marshes Be Sustainable?

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Michelle Orr

2003-10-01

Full Text Available We assess whether or not restored marshes in the San Francisco Estuary are expected to be sustainable in light of future landscape scale geomorphic processes given typical restored marsh conditions. Our assessment is based on a review of the literature, appraisal of monitoring data for restored marshes, and application of vertical accretion modeling of organic and inorganic sedimentation. Vertical accretion modeling suggests that salt marshes in San Pablo Bay will be sustainable for moderate relative sea level rise (3 to 5 mm yr-1 and average sediment supply (c. 100 mg L-1. Accelerated relative sea level rise (above 6 mm yr-1 and/or reduced sediment supply (50 mg L-1 will cause lowering of the marsh surface relative to the tide range and may cause shifts from high to low marsh vegetation by the year 2100. Widespread conversion of marsh to mudflat-"ecological drowning"-is not expected within this time frame. Marshes restored at lower elevations necessary to aid the natural development of channel systems (c. 0.5 m below mean higher high water are predicted to accrete to high marsh elevations by the year 2100 for moderate relative sea level rise and sediment supply conditions. Existing rates of sediment accretion in restored fresh water tidal marshes of the Delta of greater than 9 mm yr-1 and slightly lower drowning elevations suggest that these marshes will be resilient against relatively high rates of sea level rise. Because of higher rates of organic production, fresh water marshes are expected to be less sensitive to reduced sediment availability than salt marshes. The ultimate long-term threat to the sustainability of tidal marshes is the interruption of coastal rollover-the process by which landward marsh expansion in response to sea level rise compensates for shoreline erosion. Bay front development now prevents most landward marsh expansion, while shoreline erosion is expected to accelerate as sea level rises.

Establishing Functional Relationships between Abiotic Environment, Macrophyte Coverage, Resource Gradients and the Distribution of Mytilus trossulus in a Brackish Non-Tidal Environment.

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Jonne Kotta

Full Text Available Benthic suspension feeding mussels are an important functional guild in coastal and estuarine ecosystems. To date we lack information on how various environmental gradients and biotic interactions separately and interactively shape the distribution patterns of mussels in non-tidal environments. Opposing to tidal environments, mussels inhabit solely subtidal zone in non-tidal waterbodies and, thereby, driving factors for mussel populations are expected to differ from the tidal areas. In the present study, we used the boosted regression tree modelling (BRT, an ensemble method for statistical techniques and machine learning, in order to explain the distribution and biomass of the suspension feeding mussel Mytilus trossulus in the non-tidal Baltic Sea. BRT models suggested that (1 distribution patterns of M. trossulus are largely driven by separate effects of direct environmental gradients and partly by interactive effects of resource gradients with direct environmental gradients. (2 Within its suitable habitat range, however, resource gradients had an important role in shaping the biomass distribution of M. trossulus. (3 Contrary to tidal areas, mussels were not competitively superior over macrophytes with patterns indicating either facilitative interactions between mussels and macrophytes or co-variance due to common stressor. To conclude, direct environmental gradients seem to define the distribution pattern of M. trossulus, and within the favourable distribution range, resource gradients in interaction with direct environmental gradients are expected to set the biomass level of mussels.

The dirt on sediments

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Smith, Loren M.; Euliss, Ned H. "Chip"

2010-01-01

In the wetland science field, sediment deposition is often thought of as being beneficial especially when one thinks of coastal estuarine systems. For example, sediments deposited from streams and rivers are necessary to naturally build and maintain tidal marshes. These sediments come from eroded upland soils in the interior of the continent. When these sediments are diverted from natural coastal deposition areas, such as occurs from river channelization, we lose marshes through subsidence as is happening throughout coastal Louisiana. However, the value of eroded soils is all a matter of hydrogeomorphic perspective.

Observations on the redistribution of plutonium and americium in the Irish Sea sediments, 1978 to 1996: concentrations and inventories

International Nuclear Information System (INIS)

Kershaw, P.J.; Denoon, D.C.; Woodhead, D.S.

1999-01-01

The distribution of plutonium and americium in the sub-tidal sediments of the Irish Sea is described following major surveys in 1978, 1983, 1988 and 1995. Concentrations in surface sediments have declined near the source at Sellafield since 1988. Time-series of inter-tidal surface sediment concentrations are presented from 1977 onwards, revealing the importance of sediment reworking and transport in controlling the evolution of the environmental signal. The surface and near-surface sediments, in the eastern Irish Sea 'mud-patch', are generally well mixed with respect to Pu (α) and 241 Am distributions but show increasing variability with depth - up to 4 orders of magnitude in concentration. The inventories of 239,240 Pu and 241 Am in the sub-tidal sediments have been estimated and compared with the reported decay-corrected discharges. These amounted to 360 and 545 TBq respectively, in 1995, about 60% of the total decay-corrected discharge. Part of the unaccounted fraction may be due to unrepresentative sampling of the seabed. It is speculated that some tens of TBq of plutonium and 241 Am reside undetected in the large volumes of coarse-grained, sub-tidal and inter-tidal sediment which characterise much of the Irish Sea. This has been due to the inability of the available corers to penetrate to the base of contamination in these mobile sediments. Further observations are needed to verify and quantify the missing amount. A budget of plutonium-α and 241 Am has been estimated based on published observations in the three main compartments: water column, sub-tidal and inter-tidal sediments. This amounts to 460-540 TBq and 575-586 TBq respectively, or 64-75% and 60-61%, of the decay-corrected reported discharge. (Copyright (c) 1999 Elsevier Science B.V., Amsterdam. All rights reserved.)

Environmental change on tidal flat induced by anthropogenic effect around west coast of Korean Peninsula

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Lee, Yoon-Kyung; Choi, Jong-Kuk; Ryu, Joo-Hyung; Eom, Jinah

2014-05-01

Tidal flats are valuable ecosystem by a productive flora and fauna which support large populations of birds, form nursery and feeding areas for coastal fisheries, provide intrinsic values such as aesthetics and education (Costanza et al., 1997; Goodwin et al., 2001). The half of the world's coastal wetlands will submerge during this century in response to sea level rise although salt marsh has a capacity to adjust to sea level rise change. However, tidal flats have been changed because of several coastal construction projects that had not been considered sustainable over the last 30 years in Korean Peninsula. The total area of tidal flats decreased from approximately 2,800 km2 in 1990 to 2,393 km2 in 2005 due to the land reclamations and dredging in South Korea. Many researchers investigated topography, sedimentation changes and local hydrodynamics for this area in the early 1990s. However, they are limited to the temporal and spatial scale because field surveys in the tidal flats are restricted due to the difficulties in accessing. The aim of this study was to examine environmental change in tidal flat in a large scale for long-term based on the remotely sensed data as well as in situ measurements. This study focused on the tidal flat that not only had been affected by reclamations on a large scale such as Ganghwa and Saemangeum but also had been indirectly affected by reclamations such as Hwang-do and Gomso-bay. In this study, changes in morphology and sedimentary facies in tidal flats were estimated. Digital elevation models (DEMs) in early 2000 and 2010 were generated based on the Landsat TM/ETM+ images using a waterline method. Morphological change was estimated based on the differences of DEMs and sedimentary facies was investigated based on the calculation of image-derived PCA coefficient. Results of the morphological change in tidal flats interestingly showed that large amount of areas had been deposited whereas the other areas were eroded. Area with

Water and suspended sediment dynamics in the Sungai Selangor estuary

International Nuclear Information System (INIS)

Abdul Kadir Ishak; Kamarudin Samuding; Nazrul Hizam Yusoff

2000-01-01

Observations of salinity, temperature, suspended sediment concentration (SSC) and tidal current velocity were made in the lower and along the longitudinal axis sungai Selangor estuary over near-spring cycles. The variations of these parameters at the measurement stations and along the channel are presented to illustrate the water and sediment dynamics in the estuary. The results shows that the Sungai Selangor estuary changes from a partially-mixed type during neaps to a well-mixed one during springs. promoted by stronger tidal energy during the higher tidal ranges. The strong neap density stratification is also promoted by the high river discharges during the measurement period maximum concentration of suspended sediment 2000 mg,'/) occurs during maximum current velocities both during flood and ebb. The maximum salinity was achieved during high water slack but the salt water was totally flushed out of estuary during low water springs. The longitudinal axis measurement indicates that a partially-developed zone of turbidity maximum with a sediment concentration over 1000 mg/l was observed at the limit of salt water intrusion in salinity range less than 1 ppt. Tidal pumping as oppose to the estuarine circulation is the more dominant factor in the maximum formation as the salt water is totally excluded at low water. (author)

Submerged macrophytes modify bacterial community composition in sediments in a large, shallow, freshwater lake.

Science.gov (United States)

Zhao, Da-Yong; Liu, Peng; Fang, Chao; Sun, Yi-Meng; Zeng, Jin; Wang, Jian-Qun; Ma, Ting; Xiao, Yi-Hong; Wu, Qinglong L

2013-04-01

Submerged aquatic macrophytes are an important part of the lacustrine ecosystem. In this study, the bacterial community compositions in the rhizosphere sediments from three kinds of submerged macrophytes (Ceratophyllum demersum, Potamogeton crispus, and Vallisneria natans) were investigated to determine whether submerged macrophytes could drive the variation of bacterial community in the eutrophic Taihu Lake, China. Molecular techniques, including terminal restriction fragment length polymorphism (T-RFLP) of PCR-amplified 16S rRNA gene and clone libraries, were employed to analyze the bacterial community compositions. Remarkable differences of the T-RFLP patterns were observed among the different samples, and the results of LIBSHUFF analysis also confirmed that the bacterial community compositions in the rhizosphere sediments of three kinds of submerged macrophytes were statistically different from that of the unvegetated sediment. Acidobacteria, Deltaproteobacteria, and Betaproteobacteria were the dominant bacterial groups in the rhizosphere sediments of Ceratophyllum demersum, Potamogeton crispus, and Vallisneria natans, respectively, accounting for 15.38%, 29.03%, and 18.00% of the total bacterial abundances. Our study demonstrated that submerged macrophytes could influence the bacterial community compositions in their rhizosphere sediments, suggesting that macrophytes have an effect on the cycling and transportation of nutrients in the freshwater lake ecosystem.

Tidal effects in twin-degenerate binaries

International Nuclear Information System (INIS)

Campbell, C.G.

1984-01-01

The tidal velocity field is calculated for an initially non-rotating low mass white dwarf secondary in a twin-degenerate binary. These motions are used to find the tidal torque on the secondary, to first order in the orbital frequency, and an expression is derived for the synchronization time. For a lobe-filling secondary the synchronization time has a weak dependence on the mass and luminosity of the star, and for the binary G61-29 is found to be of the same order as the estimated lifetime of the system. It is emphasized, however, that tidal excitation of non-radial oscillatory modes in the secondary may significantly shorten the synchronization time. (author)

Chronic polyaromatic hydrocarbon (PAH contamination is a marginal driver for community diversity and prokaryotic predicted functioning in coastal sediments

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Mathilde Jeanbille

2016-08-01

Full Text Available Benthic microorganisms are key players in the recycling of organic matter and recalcitrant compounds such as polyaromatic hydrocarbons (PAHs in coastal sediments. Despite their ecological importance, the response of microbial communities to chronic PAH pollution, one of the major threats to coastal ecosystems, has received very little attention. In one of the largest surveys performed so far on coastal sediments, the diversity and composition of microbial communities inhabiting both chronically contaminated and non-contaminated coastal sediments were investigated using high-throughput sequencing on the 18S and 16S rRNA genes. Prokaryotic alpha-diversity showed significant association with salinity, temperature, and organic carbon content. The effect of particle size distribution was strong on eukaryotic diversity. Similarly to alpha-diversity, beta-diversity patterns were strongly influenced by the environmental filter, while PAHs had no influence on the prokaryotic community structure and a weak impact on the eukaryotic community structure at the continental scale. However, at the regional scale, PAHs became the main driver shaping the structure of bacterial and eukaryotic communities. These patterns were not found for PICRUSt predicted prokaryotic functions, thus indicating some degree of functional redundancy. Eukaryotes presented a greater potential for their use as PAH contamination biomarkers, owing to their stronger response at both regional and continental scales.

Soft-sediment deformation structures in seismically affected deep-sea Miocene turbidites (Cilento Basin, southern Italy

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Valente Alessio

2014-07-01

Full Text Available Soft-sediment deformation structures (SSDS are widespread in the upper part of the S. Mauro Formation (Cilento Group, Middle-Late Miocene. The succession is represented mainly by thick and very thick, massive, coarse-grained sandstones, deposited by rapid sedimentation of high-density turbidity currents. The most common SSDS are short pillars, dishes, sedimentary sills and convolutions. They occur mostly in the upper parts of sandstone beds. Vertical tubes of 4-5 cm in diameter and up to 50 cm long constitute the most striking structures. They begin in the middle part of sandstone beds, which are basically massive or contain faint dish structures. These tubes can bifurcate upwards and/ or pass into bedding-parallel veins or dikes. The vertical tubes sometimes form sand volcanoes on the then sedimentary surface.

Spatial variability of sediment transport processes over intra‐ and subtidal timescales within a fringing coral reef system

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Pomeroy, Andrew; Lowe, Ryan J.; Ghisalberti, Marco; Winter, Gundula; Storlazzi, Curt D.; Cuttler, Michael V. W.

2018-01-01

Sediment produced on fringing coral reefs that is transported along the bed or in suspension affects ecological reef communities as well as the morphological development of the reef, lagoon, and adjacent shoreline. This study quantified the physical process contribution and relative importance of incident waves, infragravity waves, and mean currents to the spatial and temporal variability of sediment in suspension. Estimates of bed shear stresses demonstrate that incident waves are the key driver of the SSC variability spatially (reef flat, lagoon, and channels) but cannot not fully describe the SSC variability alone. The comparatively small but statistically significant contribution to the bed shear stress by infragravity waves and currents, along with the spatial availability of sediment of a suitable size and volume, is also important. Although intra‐tidal variability in SSC occurs in the different reef zones, the majority of the variability occurs over longer slowly varying (subtidal) time scales, which is related to the arrival of large incident waves at a reef location. The predominant flow pathway, which can transport suspended sediment, consists of cross‐reef flow across the reef flat that diverges in the lagoon and returns offshore through channels. This pathway is primarily due to subtidal variations in wave‐driven flows, but can also be driven alongshore by wind stresses when the incident waves are small. Higher frequency (intra‐tidal) current variability also occur due to both tidal flows, as well as variations in the water depth that influence wave transmission across the reef and wave‐driven currents.

How do mangrove forests induce sedimentation?

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K. Kathiresan

2003-06-01

Full Text Available The mangrove forests play a significant role as sediment traps. They reduce tidal flows and induce sedimentation of soil particles at low tide. However, there are no such processes taking place in the non-mangrove areas. Site of Avicennia-Rhizophora interphase is more efficient than Avicennia and or Rhizophora zones, in trapping the sediment by 30, 25 and 20% respectively at low tide as compared to high tide.Los bosques de manglar juegan un papel significativo como trampas de sedimentos. Ellos reducen los flujos de mareas e inducen las sedimentación de las partículas del suelo en la marea baja. Sin embargo, tal proceso no ocurre en areas sin manglares. Los sitios de interfase Avicennia-Rhizophora son más eficientes que las zonas monoespecíficas de Avicennia o de Rhizophora para atrapar sedimentos, en un 30, 25 and 20% respectivament, durante la marea baja en comparación con la marea alta.

Temporal variation of aerobic methane oxidation over a tidal cycle in a wetland of northern Taiwan.

Science.gov (United States)

Lee, T. Y.; Wang, P. L.; Lin, L. H.

2017-12-01

Aerobic methanotrophy plays an important role in controlling methane emitted from wetlands. However, the activity of aerobic methanotrophy regulated by temporal fluctuation of oxygen and methane supply in tidal wetlands is not well known. This study aims to examine the dynamics of methane fluxes and potential aerobic methane consumption rates in a tidal wetland of northern Taiwan, where the variation of environmental characteristics, such as sulfate and methane concentration in pore water has been demonstrated during a tidal cycle. Two field campaigns were carried out in December of 2016 and March of 2017. Fluxes of methane emission, methane concentrations in surface sediments and oxygen profiles were measured at different tidal phases. Besides, batch incubations were conducted on surface sediments in order to quantify potential microbial methane consumption rates and to derive the kinetic parameters for aerobic methanotrophy. Our results demonstrated temporal changes of the surface methane concentration and the methane emission flux during a tidal cycle, while the oxygen flux into the sediment was kept at a similar magnitude. The methane flux was low when the surface was exposed for both shortest and longest periods of time. The potential aerobic methane oxidation rate was high for sample collected from the surface sediments exposed the longest. No correlation could be found between the potential aerobic methane oxidation rate and either the oxygen downward flux or methane emission flux. The decoupled relationships between these observed rates and fluxes suggest that, rather than aerobic methanotrophy, heterotrophic respirations exert a profound control on oxygen flux, and the methane emission is not only been affected by methane consumption but also methane production at depths. The maximum potential rate and the half saturation concentration determined from the batch incubations were high for the surface sediments collected in low tide, suggesting that aerobic

Profiling bacterial communities associated with sediment-based aquaculture bioremediation systems under contrasting redox regimes

Science.gov (United States)

Robinson, Georgina; Caldwell, Gary S.; Wade, Matthew J.; Free, Andrew; Jones, Clifford L. W.; Stead, Selina M.

2016-12-01

Deposit-feeding invertebrates are proposed bioremediators in microbial-driven sediment-based aquaculture effluent treatment systems. We elucidate the role of the sediment reduction-oxidation (redox) regime in structuring benthic bacterial communities, having direct implications for bioremediation potential and deposit-feeder nutrition. The sea cucumber Holothuria scabra was cultured on sediments under contrasting redox regimes; fully oxygenated (oxic) and redox stratified (oxic-anoxic). Taxonomically, metabolically and functionally distinct bacterial communities developed between the redox treatments with the oxic treatment supporting the greater diversity; redox regime and dissolved oxygen levels were the main environmental drivers. Oxic sediments were colonised by nitrifying bacteria with the potential to remediate nitrogenous wastes. Percolation of oxygenated water prevented the proliferation of anaerobic sulphate-reducing bacteria, which were prevalent in the oxic-anoxic sediments. At the predictive functional level, bacteria within the oxic treatment were enriched with genes associated with xenobiotics metabolism. Oxic sediments showed the greater bioremediation potential; however, the oxic-anoxic sediments supported a greater sea cucumber biomass. Overall, the results indicate that bacterial communities present in fully oxic sediments may enhance the metabolic capacity and bioremediation potential of deposit-feeder microbial systems. This study highlights the benefits of incorporating deposit-feeding invertebrates into effluent treatment systems, particularly when the sediment is oxygenated.

Bacterial and archaeal communities in sediments of the north Chinese marginal seas.

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Liu, Jiwen; Liu, Xiaoshou; Wang, Min; Qiao, Yanlu; Zheng, Yanfen; Zhang, Xiao-Hua

2015-07-01

Microbial communities of the Chinese marginal seas have rarely been reported. Here, bacterial and archaeal community structures and abundance in the surface sediment of four sea areas including the Bohai Sea (BS), North Yellow Sea (NYS), South Yellow Sea (SYS), and the north East China Sea (NECS) were surveyed by 16S ribosomal RNA (rRNA) gene pyrosequencing and quantitative PCR. The results showed that microbial communities of the four geographic areas were distinct from each other at the operational taxonomic unit (OTU) level, whereas the microbial communities of the BS, NYS, and SYS were more similar to each other than to the NECS at higher taxonomic levels. Across all samples, Bacteria were numerically dominant relative to Archaea, and among them, Gammaproteobacteria and Euryarchaeota were predominant in the BS, NYS, and SYS, while Deltaproteobacteria and Thaumarchaeota were prevalent in the NECS. The most abundant bacterial genera were putative sulfur oxidizer and sulfate reducer, suggesting that sulfur cycle processes might prevail in these areas, and the high abundance of dsrB (10(7)-10(8) copies g(-1)) in all sites verified the dominance of sulfate reducer in the north Chinese marginal seas. The differences in sediment sources among the sampling areas were potential explanations for the observed microbial community variations. Furthermore, temperature and dissolved oxygen of bottom water were significant environmental factors in determining both bacterial and archaeal communities, whereas chlorophyll a in sediment was significant only in structuring archaeal community. This study presented an outline of benthic microbial communities and provided insights into understanding the biogeochemical cycles in sediments of the north Chinese marginal seas.

The comparison of heavy metals (Pb and Cd) in the water and sediment during spring and neap tide tidal periods in Popoh Bay, Indonesia

Science.gov (United States)

Yona, D.; Febriana, R.; Handayani, M.

2018-04-01

This study attempted to investigate different concentration of lead (Pb) dan cadmium (Cd) in the water and sediment during spring and neap tidal periods in the Popoh Bay, Indonesia. Water and sediment samples were taken during spring and neap tides from eight sampling stations in the study area. The result shows higher concentration of Pb than the concentration of Cd in both spring and neap tides due to higher input of Pb from the oil pollution by boat and fisheries activities. Pb concentrations were doubled during neap tide in both water and sediments with the value of 0.51 and 0.28 ml/L in the water during neap and spring tide, respectively; and 0.27 ppm and 0.16 mg/kg in the sediment during neap and spring tide, respectively. On the other hand, Cd concentrations in the water were found in almost similar values between spring and neap tide (0.159 and 0.165 ml/L in spring tide and neap tide, respectively), but in the sediment, the concentration was a little higher during spring tide (0.09 and 0.05 mg/kg during spring and neap tide, respectively). This study shows that water movement during spring and neap tides has significant effect on the distribution of heavy metals.

Virus Dynamics Are Influenced by Season, Tides and Advective Transport in Intertidal, Permeable Sediments.

Science.gov (United States)

Vandieken, Verona; Sabelhaus, Lara; Engelhardt, Tim

2017-01-01

Sandy surface sediments of tidal flats exhibit high microbial activity due to the fast and deep-reaching transport of oxygen and nutrients by porewater advection. On the other hand during low tide, limited transport results in nutrient and oxygen depletion concomitant to the accumulation of microbial metabolites. This study represents the first attempt to use flow-through reactors to investigate virus production, virus transport and the impact of tides and season in permeable sediments. The reactors were filled with intertidal sands of two sites (North beach site and backbarrier sand flat of Spiekeroog island in the German Wadden Sea) to best simulate advective porewater transport through the sediments. Virus and cell release along with oxygen consumption were measured in the effluents of reactors during continuous flow of water through the sediments as well as in tidal simulation experiments where alternating cycles with and without water flow (each for 6 h) were operated. The results showed net rates of virus production (0.3-13.2 × 10 6 viruses cm -3 h -1 ) and prokaryotic cell production (0.3-10.0 × 10 5 cells cm -3 h -1 ) as well as oxygen consumption rates (56-737 μmol l -1 h -1 ) to be linearly correlated reflecting differences in activity, season and location of the sediments. Calculations show that total virus turnover was fast with 2 to 4 days, whereas virus-mediated cell turnover was calculated to range between 5-13 or 33-91 days depending on the assumed burst sizes (number of viruses released upon cell lysis) of 14 or 100 viruses, respectively. During the experiments, the homogenized sediments in the reactors became vertically structured with decreasing microbial activities and increasing impact of viruses on prokaryotic mortality with depth. Tidal simulation clearly showed a strong accumulation of viruses and cells in the top sections of the reactors when the flow was halted indicating a consistently high virus production during low tide. In

Siltation rate and main anthropic impacts on sedimentation of the São Luís tidal inlet - State of Maranhão, Brazil

Directory of Open Access Journals (Sweden)

James Werllen de Jesus Azevedo

2016-03-01

Full Text Available Abstract In recent decades, intense human intervention in the coastal zone has given rise to severe siltation and erosion problems. This scenario is located the São Luís tidal inlet, formed by the mouths of the Anil and Bacanga rivers which due to various kinds of interference have been changing their sediment transport and deposition processes. With these changes in mind, this study sought to evaluate the evolution of the siltation and sedimentation rates in this area, as well as the main anthropogenic influences associated with this process. The methodology consisted in verifying the morphological evolution on the basis of the scanning and vectorization of nautical charts of 1947 and 1966, bathymetric surveys conducted in 2006, and aerial photos dating from 2011. The results show a silting up process coincident with interventions that occurred in the Anil and Bacanga river basins, with a volume of silt estimated at 8.5x106 m3, over the period from 1944 to 2011 (64 years, at a rate of 1.6 cm.yr-1. These processes are associated mainly with the construction of the Bacanga dam and land reclamation projects undertaken for the purpose of providing new areas for urban expansion. The evaluation of the results showed intense and advanced silting up of the São Luís tidal inlet, at rates proportionally greater than those of other estuaries, calling for corrective actions and the implementation of coastal management policies for this area.

Seasonal variations in the characteristics of superficial sediments in a macrotidal estuary (the Seine inlet, France)

Science.gov (United States)

Lesourd, S.; Lesueur, P.; Brun-Cottan, J. C.; Garnaud, S.; Poupinet, N.

2003-09-01

Seasonal variations in the sedimentary regime in the mouth of the Seine river, a macrotidal estuary, are described for a 3-year period. The aim of this study is to characterize and to understand the main governing mechanisms, using data from more than a thousand of superficial sediment grab samples or box cores gathered throughout the study period. Analyses of lithofacies and rheological properties were carried out. The distribution of sediments is governed by seasonal meteorological variations. The surface covered by mud reaches a maximum (40% of the total mouth area) during winter. After the winter, the soft mud deposits are progressively redistributed throughout the whole estuary area and onto the shelf. During the lowest freshwater flow at the end of summer, the fine-grained sediments cover less than 20% of the river mouth area. These seasonal variations mainly depend on the river discharge intensity, but are also linked to wave activity. In the study area, the amount of fine-grained deposits after high river flow periods depends on (1) volume of mud erodable within the estuary, (2) the duration of the flood tidal influx, and (3) the duration preceding the particular annual high river flow. During the last decades, filling of the estuary upstream from Honfleur has led to a downstream shift of the fine-grained sediment deposition area; following this, the present-day mud deposition area is in the open part of the estuary, in the subtidal shallow area. Subsequently, fresh mud deposits undergo intense hydrodynamical and meteorological effects, and are partly reworked by waves and tidal currents effects. In this study, it is shown that the behaviour of suspended matter and of superficial sediments is strongly influenced by short but intense events including high river flows and gales.

Distinct bacterial communities in surficial seafloor sediments following the 2010 Deepwater Horizon blowout

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Tingting Yang

2016-09-01

Full Text Available A major fraction of the petroleum hydrocarbons discharged during the 2010 Macondo oil spill became associated with and sank to the seafloor as marine snow flocs. This sedimentation pulse induced the development of distinct bacterial communities. Between May 2010 and July 2011, full-length 16S rRNA gene clone libraries demonstrated bacterial community succession in oil-polluted sediment samples near the wellhead area. Libraries from early May 2010, before the sedimentation event, served as the baseline control. Freshly deposited oil-derived marine snow was collected on the surface of sediment cores in September 2010, and was characterized by abundantly detected members of the marine Roseobacter cluster within the Alphaproteobacteria. Samples collected in mid-October 2010 closest to the wellhead contained members of the sulfate-reducing, anaerobic bacterial families Desulfobacteraceae and Desulfobulbaceae within the Deltaproteobacteria, suggesting that the oil-derived sedimentation pulse triggered bacterial oxygen consumption and created patchy anaerobic microniches that favored sulfate-reducing bacteria. Phylotypes of the polycyclic aromatic hydrocarbon-degrading genus Cycloclasticus, previously found both in surface oil slicks and the deep hydrocarbon plume, were also found in oil-derived marine snow flocs sedimenting on the seafloor in September 2010, and in surficial sediments collected in October and November 2010, but not in any of the control samples. Due to the relative recalcitrance and stability of polycyclic aromatic compounds, Cycloclasticus represents the most persistent microbial marker of seafloor hydrocarbon deposition that we could identify in this dataset. The bacterial imprint of the DWH oil spill had diminished in late November 2010, when the bacterial communities in oil-impacted sediment samples collected near the Macondo wellhead began to resemble their pre-spill counterparts and spatial controls. Samples collected in summer

Effects of fine suspended sediment releases on benthic communities in artificial flumes

International Nuclear Information System (INIS)

Bruno, Maria Cristina; Carolli, Mauro; Zolezzi, Guido; Palmia, Beatrice

2016-01-01

The Italian Alps feed a large number of reservoirs for hydropower production, which are losing storage capacity due to natural inflow of sediment of different origin (alluvial, glacial). Local government and local environmental agencies authorize periodical sediment flushes with a mandatory release regime when such measure is technically feasible. Management of reservoirs often includes fine sediment pulses, which cause several ecological impacts on downstream water bodies. We conducted a set of simulations in five semi artificial flumes naturally fed by an un-impacted Alpine stream (Trentino region, NE Italy), to: i) identify possible thresholds of concentration of fine suspended sediment inducing drift in the benthic community and, ii) assess the dynamics and intensity of the drift responses in the dominant taxa. The results can help to identify the least impacting release management practices. Sediment pulses were simulated by adding fine material of known concentration to the upstream end of the flumes. The benthic organisms drifting from the whole flume were collected by filtering the whole outflow for consecutive short time intervals. We tested four different concentration values, i.e. 10x,100x, 250x, 500x the base concentration of 4 NTU, and we repeated the simulations in two periods: July, when the community is composed mainly of young larval instars and the sediment wave lasted 10 minutes, and October, when later larval stages are dominant and the wave lasted 20 minutes. In July, the maximum concentration induced a significantly higher drift response than the three lower ones. In October, even if the sediment wave was twice as long as July one, drift responses where lower, and only the responses to the highest and lowest concentrations differed significantly. In our simulation, the only possible cause for the observed increase in drift was the sediment in the suspended phase, as the deposition of sediment was negligible, and discharge did not increase

Recent sediment dynamics in hadal trenches: Evidence for the influence of higher-frequency (tidal, near-inertial) fluid dynamics

DEFF Research Database (Denmark)

Turnewitsch, Robert; Falahat, Saeed; Stehlikova, Jirina

2014-01-01

finds evidence for another mechanism that is superimposed on, and counteracts, the focussing mechanism. This superimposed mechanism is related to higher-frequency (tidal, near-inertial) fluid dynamics. In particular, there is evidence for a strong and negative relation between the intensity...... but significant influence on particulate-matter dynamics and food supply in hadal trenches in particular, but possibly also in the deep seas in general. A mechanism for the influence of internal tides on sediment dynamics is proposed. (C) 2014 Elsevier Ltd. All rights reserved.......In addition to high hydrostatic pressure, scarcity of food is viewed as a factor that limits the abundance and activity of heterotrophic organisms at great ocean depths, including hadal trenches. Supply of nutritious food largely relies on the flux of organic-rich particulate matter from...

Three-Dimensional Sediment Dynamics in Well-Mixed Estuaries: Importance of the Internally Generated Overtide, Spatial Settling Lag, and Gravitational Circulation

Science.gov (United States)

Wei, Xiaoyan; Kumar, Mohit; Schuttelaars, Henk M.

2018-02-01

To investigate the dominant sediment transport and trapping mechanisms, a semi-analytical three-dimensional model is developed resolving the dynamic effects of salt intrusion on sediment in well-mixed estuaries in morphodynamic equilibrium. As a study case, a schematized estuary with a converging width and a channel-shoal structure representative for the Delaware estuary is considered. When neglecting Coriolis effects, sediment downstream of the estuarine turbidity maximum (ETM) is imported into the estuary through the deeper channel and exported over the shoals. Within the ETM region, sediment is transported seaward through the deeper channel and transported landward over the shoals. The largest contribution to the cross-sectionally integrated seaward residual sediment transport is attributed to the advection of tidally averaged sediment concentrations by river-induced flow and tidal return flow. This contribution is mainly balanced by the residual landward sediment transport due to temporal correlations between the suspended sediment concentrations and velocities at the M2 tidal frequency. The M2 sediment concentration mainly results from spatial settling lag effects and asymmetric bed shear stresses due to interactions of M2 bottom velocities and the internally generated M4 tidal velocities, as well as the salinity-induced residual currents. Residual advection of tidally averaged sediment concentrations also plays an important role in the landward sediment transport. Including Coriolis effects hardly changes the cross-sectionally integrated sediment balance, but results in a landward (seaward) sediment transport on the right (left) side of the estuary looking seaward, consistent with observations from literature. The sediment transport/trapping mechanisms change significantly when varying the settling velocity and river discharge.

STUDY ON THE EFFECTS OF TIDE ON SEDIMENTATION IN ESTUARIES OF THE NIGER DELTA, NIGERIA

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Charles Chizom Dike

2012-12-01

Full Text Available Niger Delta Estuary Nigeria is influenced by tidal currents due to its proximity to the Atlantic Ocean. Tides in the region are mostly semidiurnal, having two high and low water levels each day, with tidal prism ranging from 0.4 to 1.5m. The effects of tidal current reduces with distance inland and are strongest at the inlets with velocity varying from 2.0 to 5.0m/sec. The depth of the Estuary Rivers is controlled by the strength of the tidal currents; areas very close to ocean with stronger tidal effect are very deep; while shallow rivers predominates the hub of the estuary. Tidal current provides the steady supply of energy that moves sediments in and out of the estuaries from the seashore thus determing river bathymetric shapes through modification of existing morphology by eroding or depositing of sediments along the river course, while further sediment deposition is curtailed at the bottom as the estuary gets shallower due to the increasing stirring by waves. Despite all the sediment coming into the estuaries, many canals in the region have remained as open-water bodies, even after some thousand years. This suggests that, the interaction between the tide and the shape of the canal floor helps to regulate long-term sedimentation. However, the Dredged Canals in the Niger Delta estuaries have suffered high siltation rates because of excessive supply of sediments generated by storm/flood waters from upland and disposal of spoils from dredging activities into the water bodies, which causes some imbalance in the estuarine self-cleaning mechanism. Sediment loads entering the mangrove swamp environment are essentially polycentric; suspended fines enter the system both from the sea and the rivers. A mathematical model was formulated to predict and study the behavior of the sea bed levels, tidal heights and currents, in other to understand how they interact with each other. The model was calibrated using data obtained from local field observations

Haida Gwaii / Queen Charlotte Islands demonstration tidal power plant feasibility study : summary results

Energy Technology Data Exchange (ETDEWEB)

Tu, A. [BC Hydro, Burnaby, BC (Canada)

2008-07-01

Remote communities may benefit from using tidal energy in terms of reduced diesel fuel consumption and the associated greenhouse gas emissions. A study was conducted to assess the feasibility for a tidal demonstration project on the Haida Gwaii, Queen Charlotte Islands. Candidate communities were scanned for resource potential, load profile, infrastructure distribution and community interest. This presentation focused on choosing an appropriate site for a given tidal power technology. Three hotspots in Masset Sound were identified as well as one hotspot at Juskatla Narrows. Technology providers were solicited for information on unit performance, cost, and trials to date. The presentation noted that demonstration or future commercial deployment is limited by resource and by the ability of the grid to accommodate tidal power. The presentation concluded with next steps which include publishing the study. tabs., figs.

Scale-dependency of macroinvertebrate communities: responses to contaminated sediments within run-of-river dams.

Science.gov (United States)

Colas, Fanny; Archaimbault, Virginie; Devin, Simon

2011-03-01

Due to their nutrient recycling function and their importance in food-webs, macroinvertebrates are essential for the functioning of aquatic ecosystems. These organisms also constitute an important component of biodiversity. Sediment evaluation and monitoring is an essential aspect of ecosystem monitoring since sediments represent an important component of aquatic habitats and are also a potential source of contamination. In this study, we focused on macroinvertebrate communities within run-of-river dams, that are prime areas for sediment and pollutant accumulation. Little is known about littoral macroinvertebrate communities within run-of-river dam or their response to sediment levels and pollution. We therefore aimed to evaluate the following aspects: the functional and structural composition of macroinvertebrate communities in run-of-river dams; the impact of pollutant accumulation on such communities, and the most efficient scales and tools needed for the biomonitoring of contaminated sediments in such environments. Two run-of-river dams located in the French alpine area were selected and three spatial scales were examined: transversal (banks and channel), transversal x longitudinal (banks/channel x tail/middle/dam) and patch scale (erosion, sedimentation and vegetation habitats). At the patch scale, we noted that the heterogeneity of littoral habitats provided many available niches that allow for the development of diversified macroinvertebrate communities. This implies highly variable responses to contamination. Once combined on a global 'banks' spatial scale, littoral habitats can highlight the effects of toxic disturbances. Copyright © 2011 Elsevier B.V. All rights reserved.

Ambient Noise in an Urbanized Tidal Channel

Science.gov (United States)

Bassett, Christopher

In coastal environments, when topographic and bathymetric constrictions are combined with large tidal amplitudes, strong currents (> 2 m/s) can occur. Because such environments are relatively rare and difficult to study, until recently, they have received little attention from the scientific community. However, in recent years, interest in developing tidal hydrokinetic power projects in these environments has motivated studies to improve this understanding. In order to support an analysis of the acoustic effects of tidal power generation, a multi-year study was conducted at a proposed project site in Puget Sound (WA) are analyzed at a site where peak currents exceeded 3.5 m/s. From these analyses, three noise sources are shown to dominate the observed variability in ambient noise between 0.02-30 kHz: anthropogenic noise from vessel traffic, sediment-generated noise during periods of strong currents, and flow-noise resulting from turbulence advected over the hydrophones. To assess the contribution of vessel traffic noise, one calendar year of Automatic Identification System (AIS) ship-traffic data was paired with hydrophone recordings. The study region included inland waters of the Salish Sea within a 20 km radius of the hydrophone deployment site in northern Admiralty Inlet. The variability in spectra and hourly, daily, and monthly ambient noise statistics for unweighted broadband and M-weighted sound pressure levels is driven largely by vessel traffic. Within the one-year study period, at least one AIS transmitting vessel is present in the study area 90% of the time and over 1,363 unique vessels are recorded. A noise budget for vessels equipped with AIS transponders identifies cargo ships, tugs, and passenger vessels as the largest contributors to noise levels. A simple model to predict received levels at the site based on an incoherent summation of noise from different vessel types yields a cumulative probability density function of broadband sound pressure

Drivers of abundance and community composition of benthic macroinvertebrates in Ottawa River sediment near Chalk River Laboratories

Energy Technology Data Exchange (ETDEWEB)

Bond, M.J.; Rowan, D.; Silke, R.; Carr, J., E-mail: bondm@aecl.ca [Atomic Energy of Canada Limited, Chalk River, Ontario (Canada)

2013-12-15

The Ottawa River has received effluent from Chalk River Laboratories (CRL) for more than 60 years. Some radionuclides and contaminants released in effluents are bound rapidly to particles and deposited in bottom sediments where they may be biologically available to benthic invertebrates and other aquatic biota. As part of a larger ecological assessment, we assess the potential impact of contaminated sediments in the vicinity of CRL on local benthic community structure. Using bivariate and multivariate approaches, we demonstrate that CRL operations have had little impact on the local benthic community. Despite elevated anthropogenic radionuclide activity concentrations in sediment near CRL's process outfall, the benthic community is no less abundant or diverse than what is observed upstream at background levels. The Ottawa River benthic invertebrate community is structured predominantly by natural physical and biological conditions in the sediment, specifically sediment water content and organic content. These natural habitat conditions have a stronger influence on macroinvertebrate communities than sediment contamination. (author)

Environmental Effects of Sediment Transport Alteration and Impacts on Protected Species: Edgartown Tidal Energy Project

Energy Technology Data Exchange (ETDEWEB)

Barrett, Stephen B; Schlezinger, David, Ph.D; Cowles, Geoff, Ph.D; Hughes, Patricia; Samimy,; Roland, I; and Terray, E, Ph.D.

2012-12-29

potential for biofouling and foundation scouring. Woods Hole Oceanographic Institution, cooperating with SMAST, developed an oceanographic model to predict changes in sediment transport as a result of the proposed tidal energy project. Provincetown Center for Coastal Studies prepared background material on protected species - including whales, seals, and sea turtles - in the project area and implemented an initial tagging program to record location specific information on seals and sea turtles. HMMH communicated research plans and findings with local stakeholder groups, state and federal resource agency staff, and the ocean power industry. The information is being used to prepare environmental permit applications and obtain approvals for project construction.

Rapid evolution of a marsh tidal creek network in response to sea level rise.

Science.gov (United States)

Hughes, Z. J.; Fitzgerald, D. M.; Mahadevan, A.; Wilson, C. A.; Pennings, S. C.

2008-12-01

In the Santee River Delta (SRD), South Carolina, tidal creeks are extending rapidly onto the marsh platform. A time-series of aerial photographs establishes that these channels were initiated in the 1950's and are headward eroding at a rate of 1.9 m /yr. Short-term trends in sea level show an average relative sea level rise (RSLR) of 4.6 mm/yr over a 20-year tide gauge record from nearby Winyah Bay and Charleston Harbor (1975-1995). Longer-term (85-year) records in Charleston suggest a rate of 3.2 mm/yr. RSLR in the SRD is likely even higher as sediment cores reveal that the marsh is predominantly composed of fine-grained sediment, making it highly susceptible to compaction and subsidence. Furthermore, loss in elevation will have been exacerbated by the decrease in sediment supply due to the damming of the Santee River in 1939. The rapid rate of headward erosion indicates that the marsh platform is in disequilibrium; unable to keep pace with RSLR through accretionary processes and responding to an increased volume and frequency of inundation through the extension of the drainage network. The observed tidal creeks show no sinuosity and a distinctive morphology associated with their young age and biological mediation during their evolution. Feedbacks between tidal flow, vegetation and infauna play a strong role in the morphological development of the creeks. The creek heads are characterized by a region denuded of vegetation, the edges of which are densely populated and burrowed by Uca Pugnax (fiddler crab). Crab burrowing destabilizes sediment, destroys rooting and impacts drainage. Measured infiltration rates are three orders of magnitude higher in the burrowed regions than in a control area (1000 ml/min and 0.6 ml/min respectively). Infiltration of oxygenated water enhances decomposition of organic matter and root biomass is reduced within the creek head (marsh=4.3 kg/m3, head=0.6 kg/m3). These processes lead to the removal and collapse of the soils, producing

The secret gardener: vegetation and the emergence of biogeomorphic patterns in tidal environments.

Science.gov (United States)

Da Lio, Cristina; D'Alpaos, Andrea; Marani, Marco

2013-01-01

The presence and continued existence of tidal morphologies, and in particular of salt marshes, is intimately connected with biological activity, especially with the presence of halophytic vegetation. Here, we review recent contributions to tidal biogeomorphology and identify the presence of multiple competing stable states arising from a two-way feedback between biomass productivity and topographic elevation. Hence, through the analysis of previous and new results on spatially extended biogeomorphological systems, we show that multiple stable states constitute a unifying framework explaining emerging patterns in tidal environments from the local to the system scale. Furthermore, in contrast with traditional views we propose that biota in tidal environments is not just passively adapting to morphological features prescribed by sediment transport, but rather it is 'The Secret Gardener', fundamentally constructing the tidal landscape. The proposed framework allows to identify the observable signature of the biogeomorphic feedbacks underlying tidal landscapes and to explore the response and resilience of tidal biogeomorphic patterns to variations in the forcings, such as the rate of relative sea-level rise.

Global case studies of soft-sediment deformation structures (SSDS: Definitions, classifications, advances, origins, and problems

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G. Shanmugam

2017-10-01

Problems that hinder our understanding of SSDS still remain. They are: (1 vague definitions of the phrase “soft-sediment deformation”; (2 complex factors that govern the origin of SSDS; (3 omission of vital empirical data in documenting vertical changes in facies using measured sedimentological logs; (4 difficulties in distinguishing depositional processes from tectonic events; (5 a model-driven interpretation of SSDS (i.e., earthquake being the singular cause; (6 routine application of the genetic term “seismites” to the “SSDS”, thus undermining the basic tenet of process sedimentology (i.e., separation of interpretation from observation; (7 the absence of objective criteria to differentiate 21 triggering mechanisms of liquefaction and related SSDS; (8 application of the process concept “high-density turbidity currents”, a process that has never been documented in modern oceans; (9 application of the process concept “sediment creep” with a velocity connotation that cannot be inferred from the ancient record; (10 classification of pockmarks, which are hollow spaces (i.e., without sediments as SSDS, with their problematic origins by fluid expulsion, sediment degassing, fish activity, etc.; (11 application of the Earth's climate-change model; and most importantly, (12 an arbitrary distinction between depositional process and sediment deformation. Despite a profusion of literature on SSDS, our understanding of their origin remains muddled. A solution to the chronic SSDS problem is to utilize the robust core dataset from scientific drilling at sea (DSDP/ODP/IODP with a constrained definition of SSDS.

Seasonality of community structure and carbon flow in Narragansett Bay sediments

International Nuclear Information System (INIS)

Rudnick, D.T.

1984-01-01

Seasonal patterns of benthic community dynamics and the pathways of detrital decomposition in Narragansett Bay were examined. Benthic meiofauna and macrofauna exhibited a pronounced seasonality, with peak abundances in the late spring and minima in the late summer. This pattern was most pronounced for surface dwelling fauna, particularly harpacticoid copepods. These results were attributed to the seasonality of detrital inputs to the sediment and the fate of these inputs. A six month study in which 14 C-sodium bicarbonate was added to a large (13 m 3 ) microcosm enabled the author to observe pathways of carbon flow. Half of the labeled organic carbon that was deposited on the sediment during the winter and spring was found in the sediment in July. At least 20 gC/m 2 had accumulated since December. Within the sediment, the existence of two discrete food webs was distinguished by measurement of faunal specific activity. Surface fauna, dominated by the meiofauna, exclusively assimilate fresh (labeled) organics, while subsurface fauna (meiofauna and macrofauna) predominantly assimilated older, non-labeled organics for the duration of the study. Only the subsurface food web had access to the storage of buried detritus. While there was a surplus of detritus for both food webs during the winter and spring, the authors expect that benthic respiration rates exceed organic deposition rates during the summer. Detrital storage may be critical for the survival of the fauna through the summer

Strong tidal modulation of net ecosystem exchange in a salt marsh in North Inlet, South Carolina

Science.gov (United States)

O'Halloran, T. L.; Smith, E. M.; Bogoev, I.

2017-12-01

Along the southeastern US, intertidal salt marshes represent a critical habitat at the interface of the terrestrial and marine environments and perform a variety of ecological functions and services that make them of great economic importance for coastal communities They provide essential fish and shellfish habitat, with a majority of all commercially- and recreationally important fish species being dependent on intertidal marsh habitat during some portion of their life cycle. The penaeid shrimp industry, South Carolina's most economically important fishery, would cease to exist without the critical nursery function provided by intertidal salt marshes. Smooth cordgrass (Spartina alterniflora) is a keystone species in the high salinity marshes of the southeastern U.S., and its functioning is essential to the health and survival of salt marshes under rising sea levels. To better quantify and facilitate prediction of future salt marsh productivity, in May of 2017, we established a new integrated eddy covariance tower system to measure the net ecosystem exchange of carbon in a salt marsh in coastal South Carolina. The tower site is co-located with long-term, ongoing measurements as part of the North Inlet-Winyah Bay National Estuarine Research Reserve (NI-WB NERR). Current sampling conducted within the eddy flux footprint includes: annual measures of the vegetation community at the time of peak biomass; bi-monthly measures of sediment elevation at Sediment Elevation Tables (SETs) located at the upper and lower ends of the flux footprint; monthly sediment porewater salinity and nutrient (ammonium, orthophosphate) and sulfide concentrations; and biannual sediment elevation surveys by RTK-GPS. A suite of water quality measurements are made every 15 minutes in the main creek that floods the marsh platform in the flux footprint. Here we present our first six months of observations investigating the abiotic drivers of productivity on daily (intratidal) to monthly timescales

Linking human impacts within an estuary to ebb-tidal delta evolution

Science.gov (United States)

Dallas, Kate L.; Barnard, Patrick L.

2009-01-01

San Francisco Bay, California, USA is among the most anthropogenically altered estuaries in the entire United States, but the impact on sediment transport to the coastal ocean has not been quantified. Analysis of four historic bathymetric surveys has revealed large changes to the morphology of the San Francisco Bar, an ebb-tidal delta at the mouth of the San Francisco Bay. From 1873 to 2005 the bar eroded an average of 80 cm, which equates to a total volume loss of 100 + 65 x 106 m3 of sediment. Comparison of the surveys indicates the entire ebb delta has contracted radially while its crest has moved landward an average of 1 km. Compilation of historic records reveals that 130 x 106 m3 of sediment has been permanently removed from the San Francisco Bay and adjacent coastal ocean. Constriction of the bar is hypothesized to be from a decrease in sediment supply from San Francisco Bay, a reduction in the tidal prism of the estuary, and/or a reduction in the input of hydraulic mining debris. Changes to the morphology of the San Francisco Bar have likely altered wave refraction and focusing patterns on adjacent beaches and may be a factor in persistent beach erosion occurring in the area.

The Integration of Environmental Constraints into Tidal Array Optimisation

Science.gov (United States)

du Feu, Roan; de Trafford, Sebastian; Culley, Dave; Hill, Jon; Funke, Simon W.; Kramer, Stephan C.; Piggott, Matthew D.

2015-04-01

It has been estimated by The Carbon Trust that the marine renewable energy sector, of which tidal stream turbines are projected to play a large part, could produce 20% of the UK's present electricity requirements. This has lead to the important question of how this technology can be deployed in an economically and environmentally friendly manner. Work is currently under way to understand how the tidal turbines that constitute an array can be arranged to maximise the total power generated by that array. The work presented here continues this through the inclusion of environmental constraints. The benefits of the renewable energy sector to our environment at large are not in question. However, the question remains as to the effects this burgeoning sector will have on local environments, and how to mitigate these effects if they are detrimental. For example, the presence of tidal arrays can, through altering current velocity, drastically change the sediment transport into and out of an area along with re-suspending existing sediment. This can have the effects of scouring or submerging habitat, mobilising contaminants within the existing sediment, reducing food supply and altering the turbidity of the water. All of which greatly impact upon any fauna in the affected region. This work pays particular attention to the destruction of habitat of benthic fauna, as this is quantifiable as a direct result of change in the current speed; a primary factor in determining sediment accumulation on the sea floor. OpenTidalFarm is an open source tool that maximises the power generated by an array through repositioning the turbines within it. It currently uses a 2D shallow water model with turbines represented as bump functions of increased friction. The functional of interest, power extracted by the array, is evaluated from the flow field which is calculated at each iteration using a finite element method. A gradient-based local optimisation is then used through solving the

Bacterial community survey of sediments at Naracoorte Caves, Australia

Directory of Open Access Journals (Sweden)

Ball Andrew S.

2012-07-01

Full Text Available Bacterial diversity in sediments at UNESCO World Heritage listed Naracoorte Caves was surveyed as part of an investigation carried out in a larger study on assessing microbial communities in caves. Cave selection was based on tourist accessibility; Stick Tomato and Alexandra Cave (> 15000 annual visits and Strawhaven Cave was used as control (no tourist access. Microbial analysis showed that Bacillus was the most commonly detected microbial genus by culture dependent and independent survey of tourist accessible and inaccessible areas of show (tourist accessible and control caves. Other detected sediment bacterial groups were assigned to the Firmicutes, Actinobacteria and Proteobacteria. The survey also showed differences in bacterial diversity in caves with human access compared to the control cave with the control cave having unique microbial sequences (Acinetobacter, Agromyces, Micrococcus and Streptomyces. The show caves had higher bacterial counts, different 16S rDNA based DGGE cluster patterns and principal component groupings compared to Strawhaven. Different factors such as human access, cave use and configurations could have been responsible for the differences observed in the bacterial community cluster patterns (tourist accessible and inaccessible areas of these caves. Cave sediments can therefore act as reservoirs of microorganisms. This might have some implications on cave conservation activities especially if these sediments harbor rock art degrading microorganisms in caves with rock art.

Geophysical characterization of contaminated muddy sediments

International Nuclear Information System (INIS)

McDermott, I. R.; English, G. E.

1997-01-01

A non-intrusive, seismic subbottom profile survey of pond sediments was conducted on a former U.S.Naval Facility at Argentia, Newfoundland, to characterize the nature and extent of contamination. An IKB Seistec boomer was used in conjunction with C-CORE's HI-DAPT digital data acquisition and processing system and differential GPS system. The survey was successful in locating regions of soft muddy sediments and in determining the thickness of these deposits. Subsurface buried objects, which are potential sources of pollution, were also identified. Intrusive profiling of the sediment was done with a new tool, the Soil Stiffness Probe, which combines two geophysical measurement systems to determine bulk density and shear stiffness. The muddy sediments were found to be highly 'fluidized', indicating that they could be easily removed with a suction dredge. 4 refs., 5 figs

In-Well Sediment Incubators to Evaluate Microbial Community Stability and Dynamics following Bioimmobilization of Uranium

International Nuclear Information System (INIS)

Baldwin, Brett R.; Peacock, Aaron D.; Gan, M.; Resch, Charles T.; Arntzen, Evan V.; Smithgall, A.N.; Pfiffner, S.; Freifeld, Barry M.; White, D.C.; Long, Philip E.

2009-01-01

An in-situ incubation device (ISI) was developed in order to investigate the stability and dynamics of sediment associated microbial communities to prevailing subsurface oxidizing or reducing conditions. Here we describe the use of these devices at the Old Rifle Uranium Mill Tailings Remedial Action (UMTRA) site. During the 7 month deployment oxidized Rifle aquifer background sediments (RABS) were deployed in previously biostimulated wells under iron reducing conditions, cell densities of known iron reducing bacteria including Geobacteraceae increased significantly showing the microbial community response to local subsurface conditions. PLFA profiles of RABS following in situ deployment were strikingly similar to those of adjacent sediment cores suggesting ISI results could be extrapolated to the native material of the test plots. Results for ISI deployed reduced sediments showed only slight changes in community composition and pointed toward the ability of the ISIs to monitor microbial community stability and response to subsurface conditions.

Research on Local Scour at Bridge Pier under Tidal Action

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Wang Jianping

2015-01-01

Full Text Available Through the local scour test at bridge pier under tidal action in a long time series, this paper observes the growing trend of the deepest point of local scour at bridge pier under tidal conditions with different characteristic parameters, analyzes the impact of repeat sediment erosion and deposition in the scouring pit caused by reversing current on the development process of the scouring pit, and clarifies the relation between the tide and local scouring depth at bridge pier under steady flow conditions, so as to provide a scientific basis for bridge design and safe operation of estuary and harbor areas.

Bacterial Communities in Polluted Seabed Sediments: A Molecular Biology Assay in Leghorn Harbor

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Carolina Chiellini

2013-01-01

Full Text Available Seabed sediments of commercial ports are often characterized by high pollution levels. Differences in number and distribution of bacteria in such areas can be related to distribution of pollutants in the port and to sediment conditions. In this study, the bacterial communities of five sites from Leghorn Harbor seabed were characterized, and the main bacterial groups were identified. T-RFLP was used for all samples; two 16S rRNA libraries and in silico digestion of clones were used to identify fingerprint profiles. Library data, phylogenetic analysis, and T-RFLP coupled with in silico digestion of the obtained sequences evidenced the dominance of Proteobacteria and the high percentage of Bacteroidetes in all sites. The approach highlighted similar bacterial communities between samples coming from the five sites, suggesting a modest differentiation among bacterial communities of different harbor seabed sediments and hence the capacity of bacterial communities to adapt to different levels and types of pollution.

Microbial diversity and anaerobic hydrocarbon degradation potential in an oil-contaminated mangrove sediment.

Science.gov (United States)

Andrade, Luiza L; Leite, Deborah C A; Ferreira, Edir M; Ferreira, Lívia Q; Paula, Geraldo R; Maguire, Michael J; Hubert, Casey R J; Peixoto, Raquel S; Domingues, Regina M C P; Rosado, Alexandre S

2012-08-30

Mangrove forests are coastal wetlands that provide vital ecosystem services and serve as barriers against natural disasters like tsunamis, hurricanes and tropical storms. Mangroves harbour a large diversity of organisms, including microorganisms with important roles in nutrient cycling and availability. Due to tidal influence, mangroves are sites where crude oil from spills farther away can accumulate. The relationship between mangrove bacterial diversity and oil degradation in mangrove sediments remains poorly understood. Mangrove sediment was sampled from 0-5, 15-20 and 35-40 cm depth intervals from the Suruí River mangrove (Rio de Janeiro, Brazil), which has a history of oil contamination. DGGE fingerprinting for bamA, dsr and 16S rRNA encoding fragment genes, and qPCR analysis using dsr and 16S rRNA gene fragment revealed differences with sediment depth. Analysis of bacterial 16S rRNA gene diversity revealed changes with depth. DGGE for bamA and dsr genes shows that the anaerobic hydrocarbon-degrading community profile also changed between 5 and 15 cm depth, and is similar in the two deeper sediments, indicating that below 15 cm the anaerobic hydrocarbon-degrading community appears to be well established and homogeneous in this mangrove sediment. qPCR analysis revealed differences with sediment depth, with general bacterial abundance in the top layer (0-5 cm) being greater than in both deeper sediment layers (15-20 and 35-40 cm), which were similar to each other.

Magnetically Assisted Bilayer Composites for Soft Bending Actuators

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Sung-Hwan Jang

2017-06-01

Full Text Available This article presents a soft pneumatic bending actuator using a magnetically assisted bilayer composite composed of silicone polymer and ferromagnetic particles. Bilayer composites were fabricated by mixing ferromagnetic particles to a prepolymer state of silicone in a mold and asymmetrically distributed them by applying a strong non-uniform magnetic field to one side of the mold during the curing process. The biased magnetic field induces sedimentation of the ferromagnetic particles toward one side of the structure. The nonhomogeneous distribution of the particles induces bending of the structure when inflated, as a result of asymmetric stiffness of the composite. The bilayer composites were then characterized with a scanning electron microscopy and thermogravimetric analysis. The bending performance and the axial expansion of the actuator were discussed for manipulation applications in soft robotics and bioengineering. The magnetically assisted manufacturing process for the soft bending actuator is a promising technique for various applications in soft robotics.

Magnetically Assisted Bilayer Composites for Soft Bending Actuators.

Science.gov (United States)

Jang, Sung-Hwan; Na, Seon-Hong; Park, Yong-Lae

2017-06-12

This article presents a soft pneumatic bending actuator using a magnetically assisted bilayer composite composed of silicone polymer and ferromagnetic particles. Bilayer composites were fabricated by mixing ferromagnetic particles to a prepolymer state of silicone in a mold and asymmetrically distributed them by applying a strong non-uniform magnetic field to one side of the mold during the curing process. The biased magnetic field induces sedimentation of the ferromagnetic particles toward one side of the structure. The nonhomogeneous distribution of the particles induces bending of the structure when inflated, as a result of asymmetric stiffness of the composite. The bilayer composites were then characterized with a scanning electron microscopy and thermogravimetric analysis. The bending performance and the axial expansion of the actuator were discussed for manipulation applications in soft robotics and bioengineering. The magnetically assisted manufacturing process for the soft bending actuator is a promising technique for various applications in soft robotics.

Numerical Simulations of the Effects of a Tidal Turbine Array on Near-Bed Velocity and Local Bed Shear Stress

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Philip A. Gillibrand

2016-10-01

Full Text Available We apply a three-dimensional hydrodynamic model to consider the potential effects of energy extraction by an array of tidal turbines on the ambient near-bed velocity field and local bed shear stress in a coastal channel with strong tidal currents. Local bed shear stress plays a key role in local sediment dynamics. The model solves the Reynold-averaged Navier-Stokes (RANS equations on an unstructured mesh using mixed finite element and finite volume techniques. Tidal turbines are represented through an additional form drag in the momentum balance equation, with the thrust imparted and power generated by the turbines being velocity dependent with appropriate cut-in and cut-out velocities. Arrays of 1, 4 and 57 tidal turbines, each of 1.5 MW capacity, were simulated. Effects due to a single turbine and an array of four turbines were negligible. The main effect of the array of 57 turbines was to cause a shift in position of the jet through the tidal channel, as the flow was diverted around the tidal array. The net effect of this shift was to increase near-bed velocities and bed shear stress along the northern perimeter of the array by up to 0.8 m·s−1 and 5 Pa respectively. Within the array and directly downstream, near-bed velocities and bed shear stress were reduced by similar amounts. Changes of this magnitude have the potential to modify the known sand and shell banks in the region. Continued monitoring of the sediment distributions in the region will provide a valuable dataset on the impacts of tidal energy extraction on local sediment dynamics. Finally, the mean power generated per turbine is shown to decrease as the turbine array increased in size.

Field studies of hydrodynamic conditions and fine-sediment suspension in the Kapar coastal region, Malaysia

International Nuclear Information System (INIS)

Abdul Kadir Ishak

2006-01-01

Field studies to determine the hydrodynamics and fine-sediment transport were carried out at the Kapar coastal region, on the west coast of the Malaysian Peninsula. Several observation stations were established to measure near-bed tidal currents, suspended sediment concentration (SSC), water temperature, salinity and tidal elevation. It was found that resuspension (erosion) and deposition of fine sediment occurred during every tidal cycle, with greater transport occurred during the ebb than the flood. This become the major source of fine sediment that contribute to the siltation problem in this region. The high resuspension and entrainment of sediment into the flow column was due to a high near-bed current velocity which was at its peak at 1.3 m/s (during spring tides) and easily-eroded fine particles recently settled during previous tidal cycles. Significant erosion (and deposition) took place during the spring tides but little erosion was observed during the neap. The secondary source of fine sediment is from Sungai Kelang transported to the area by ebb currents in particular during spring tides. The measurement data also showed that the current flows around an industrial construction, the Kapar power station, had been modified and greatly reduced, which had resulted in a significant siltation problem in this region. This study contributes to a better understanding of the influence of hydrodynamics on the physical processes relating to the resuspension, transport and deposition of the fine-sediment in this region. (Author)

Distribution of iron- and sulfate-reducing bacteria across a coastal acid sulfate soil (CASS environment: implications for passive bioremediation by tidal inundation

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Yu-Chen eLing

2015-07-01

Full Text Available Coastal acid sulfate soils (CASS constitute a serious and global environmental problem. Oxidation of iron sulfide minerals exposed to air generates sulfuric acid with consequently negative impacts on coastal and estuarine ecosystems. Tidal inundation represents one current treatment strategy for CASS, with the aim of neutralizing acidity by triggering microbial iron- and sulfate-reduction and inducing the precipitation of iron-sulfides. Although well-known functional guilds of bacteria drive these processes, their distributions within CASS environments, as well as their relationships to tidal cycling and the availability of nutrients and electron acceptors, are poorly understood. These factors will determine the long-term efficacy of passive CASS remediation strategies. Here we studied microbial community structure and functional guild distribution in sediment cores obtained from ten depths ranging from 0-20 cm in three sites located in the supra-, inter- and sub-tidal segments, respectively, of a CASS-affected salt marsh (East Trinity, Cairns, Australia. Whole community 16S rRNA gene diversity within each site was assessed by 454 pyrotag sequencing and bioinformatic analyses in the context of local hydrological, geochemical and lithological factors. The results illustrate spatial overlap, or close association, of iron- and sulfate-reducing bacteria in an environment rich in organic matter and controlled by parameters such as acidity, redox potential, degree of water saturation, and mineralization. The observed spatial distribution implies the need for empirical understanding of the timing, relative to tidal cycling, of various terminal electron-accepting processes that control acid generation and biogeochemical iron and sulfur cycling.

Effect of Elodea nuttallii roots on bacterial communities and MMHg proportion in a Hg polluted sediment.

Science.gov (United States)

Regier, Nicole; Frey, Beat; Converse, Brandon; Roden, Eric; Grosse-Honebrink, Alexander; Bravo, Andrea Garcia; Cosio, Claudia

2012-01-01

The objective of this study was to assess the effect of a rooted macrophyte Elodea nuttallii on rhizosphere bacterial communities in Hg contaminated sediments. Specimens of E. nuttallii were exposed to sediments from the Hg contaminated Babeni reservoir (Olt River, Romania) in our microcosm. Plants were allowed to grow for two months until they occupied the entirety of the sediments. Total Hg and MMHg were analysed in sediments where an increased MMHg percentage of the total Hg in pore water of rhizosphere sediments was found. E. nuttallii roots also significantly changed the bacterial community structure in rhizosphere sediments compared to bulk sediments. Deltaproteobacteria dominated the rhizosphere bacterial community where members of Geobacteraceae within the Desulfuromonadales and Desulfobacteraceae were identified. Two bacterial operational taxonomic units (OTUs) which were phylogenetically related to sulfate-reducing bacteria (SRB) became abundant in the rhizosphere. We suggest that these phylotypes could be potentially methylating bacteria and might be responsible for the higher MMHg percentage of the total Hg in rhizosphere sediments. However, SRB were not significantly favoured in rhizosphere sediments as shown by qPCR. Our findings support the hypothesis that rooted macrophytes created a microenvironment favorable for Hg methylation. The presence of E. nuttallii in Hg contaminated sediments should therefore not be overlooked.

Effect of Elodea nuttallii roots on bacterial communities and MMHg proportion in a Hg polluted sediment.

Directory of Open Access Journals (Sweden)

Nicole Regier

Full Text Available The objective of this study was to assess the effect of a rooted macrophyte Elodea nuttallii on rhizosphere bacterial communities in Hg contaminated sediments. Specimens of E. nuttallii were exposed to sediments from the Hg contaminated Babeni reservoir (Olt River, Romania in our microcosm. Plants were allowed to grow for two months until they occupied the entirety of the sediments. Total Hg and MMHg were analysed in sediments where an increased MMHg percentage of the total Hg in pore water of rhizosphere sediments was found. E. nuttallii roots also significantly changed the bacterial community structure in rhizosphere sediments compared to bulk sediments. Deltaproteobacteria dominated the rhizosphere bacterial community where members of Geobacteraceae within the Desulfuromonadales and Desulfobacteraceae were identified. Two bacterial operational taxonomic units (OTUs which were phylogenetically related to sulfate-reducing bacteria (SRB became abundant in the rhizosphere. We suggest that these phylotypes could be potentially methylating bacteria and might be responsible for the higher MMHg percentage of the total Hg in rhizosphere sediments. However, SRB were not significantly favoured in rhizosphere sediments as shown by qPCR. Our findings support the hypothesis that rooted macrophytes created a microenvironment favorable for Hg methylation. The presence of E. nuttallii in Hg contaminated sediments should therefore not be overlooked.

Distribution of the dominant microbial communities in marine sediments containing high concentrations of gas hydrates

Energy Technology Data Exchange (ETDEWEB)

Briggs, B.; Colwell, F.; Carini, P.; Torres, M. [Oregon State Univ., Corvallis, OR (United States); Hangsterfer, A.; Kastner, M. [California Univ., San Diego, CA (United States). Scripps Inst. of Oceanography; Brodie, E. [Lawrence Berkeley National Laboratory, Berkeley, CA (United States). Center for Environmental Biotechnology; Daly, R. [California Univ., Berkeley, CA (United States); Holland, M. [GeoTek, Daventry, Northants (United Kingdom); Long, P.; Schaef, H. [Pacific Northwest National Laboratory, Richland, WA (United States). Environmental Technology; Delwiche, M. [Idaho National Laboratory, Idaho Falls, ID (United States). Biotechnology; Winters, W. [United States Geological Survey, Woods Hole, MA (United States). Woods Hole Science Center; Riedel, M. [McGill Univ., Montreal, PQ (Canada). Dept. of Earth and Planetary Sciences

2008-07-01

Methane produced by microorganisms represents a large portion of the methane that occurs in marine sediments where gas hydrates are present. The diverse communities that populate these formations have been documented by cultures or through molecular traces. Previous studies have explored the biogeography of hydrate-bearing systems by comparing clone libraries developed from sediments where hydrates are abundant with those developed from sediments that lack hydrates. There is a distinct microbial community present in sediments that have methane hydrates. This paper presented an investigation into finer-scale biogeography, in order to determine how factors such as the presence or absence of hydrates, grain size, and the depositional environment in marine sediments may control the number, type and distribution of microbial communities in sediments. The purpose of the study was to understand the controls on the distribution and activity of all microbes that contribute to the conversion of organic matter to methane. To this aim, DNA was extracted from deep marine sediments cored from continental slope locations including offshore India and the Cascadia Margin. The data from the study was used to refine computational models that require biological rate terms that are consistent with sediment conditions in order to accurately describe the dynamics of this large methane reservoir. The paper discussed the materials and methods used for the study, including the sample site, sample collection and microbiological analysis. Results were presented in terms of DNA extractions; microbial diversity; and biofilm analyses. It was concluded that the findings from the study complemented previously reported studies which indicated the presence of diverse microbial communities in sediments containing methane hydrates. 9 refs., 5 figs.

Effects of pesticides on community composition and activity of sediment microbes - responses at various levels of microbial community organization

International Nuclear Information System (INIS)

Widenfalk, Anneli; Bertilsson, Stefan; Sundh, Ingvar; Goedkoop, Willem

2008-01-01

A freshwater sediment was exposed to the pesticides captan, glyphosate, isoproturon, and pirimicarb at environmentally relevant and high concentrations. Effects on sediment microorganisms were studied by measuring bacterial activity, fungal and total microbial biomass as community-level endpoints. At the sub-community level, microbial community structure was analysed (PLFA composition and bacterial 16S rRNA genotyping, T-RFLP). Community-level endpoints were not affected by pesticide exposure. At lower levels of microbial community organization, however, molecular methods revealed treatment-induced changes in community composition. Captan and glyphosate exposure caused significant shifts in bacterial community composition (as T-RFLP) at environmentally relevant concentrations. Furthermore, differences in microbial community composition among pesticide treatments were found, indicating that test compounds and exposure concentrations induced multidirectional shifts. Our study showed that community-level end points failed to detect these changes, underpinning the need for application of molecular techniques in aquatic ecotoxicology. - Molecular techniques revealed pesticide-induced changes at lower levels of microbial community organization that were not detected by community-level end points

Effects of pesticides on community composition and activity of sediment microbes - responses at various levels of microbial community organization

Energy Technology Data Exchange (ETDEWEB)

Widenfalk, Anneli [Department of Environmental Assessment, Swedish University of Agricultural Sciences, P.O. Box 7050, SE-750 07 Uppsala (Sweden)], E-mail: anneli.widenfalk@kemi.se; Bertilsson, Stefan [Limnology/Department of Ecology and Evolution, Evolutionary Biology Centre, Uppsala University, Norbyvaegen 20, SE-752 36 Uppsala (Sweden); Sundh, Ingvar [Department of Microbiology, Swedish University of Agricultural Sciences, P.O. Box 7025, SE-750 07 Uppsala (Sweden); Goedkoop, Willem [Department of Environmental Assessment, Swedish University of Agricultural Sciences, P.O. Box 7050, SE-750 07 Uppsala (Sweden)

2008-04-15

A freshwater sediment was exposed to the pesticides captan, glyphosate, isoproturon, and pirimicarb at environmentally relevant and high concentrations. Effects on sediment microorganisms were studied by measuring bacterial activity, fungal and total microbial biomass as community-level endpoints. At the sub-community level, microbial community structure was analysed (PLFA composition and bacterial 16S rRNA genotyping, T-RFLP). Community-level endpoints were not affected by pesticide exposure. At lower levels of microbial community organization, however, molecular methods revealed treatment-induced changes in community composition. Captan and glyphosate exposure caused significant shifts in bacterial community composition (as T-RFLP) at environmentally relevant concentrations. Furthermore, differences in microbial community composition among pesticide treatments were found, indicating that test compounds and exposure concentrations induced multidirectional shifts. Our study showed that community-level end points failed to detect these changes, underpinning the need for application of molecular techniques in aquatic ecotoxicology. - Molecular techniques revealed pesticide-induced changes at lower levels of microbial community organization that were not detected by community-level end points.

Model behavior and sensitivity in an application of the cohesive bed component of the community sediment transport modeling system for the York River estuary, VA, USA

Science.gov (United States)

Fall, Kelsey A.; Harris, Courtney K.; Friedrichs, Carl T.; Rinehimer, J. Paul; Sherwood, Christopher R.

2014-01-01

The Community Sediment Transport Modeling System (CSTMS) cohesive bed sub-model that accounts for erosion, deposition, consolidation, and swelling was implemented in a three-dimensional domain to represent the York River estuary, Virginia. The objectives of this paper are to (1) describe the application of the three-dimensional hydrodynamic York Cohesive Bed Model, (2) compare calculations to observations, and (3) investigate sensitivities of the cohesive bed sub-model to user-defined parameters. Model results for summer 2007 showed good agreement with tidal-phase averaged estimates of sediment concentration, bed stress, and current velocity derived from Acoustic Doppler Velocimeter (ADV) field measurements. An important step in implementing the cohesive bed model was specification of both the initial and equilibrium critical shear stress profiles, in addition to choosing other parameters like the consolidation and swelling timescales. This model promises to be a useful tool for investigating the fundamental controls on bed erodibility and settling velocity in the York River, a classical muddy estuary, provided that appropriate data exists to inform the choice of model parameters.

Factor-cluster analysis and enrichment study of Mangrove sediments - An example from Mengkabong, Sabah

International Nuclear Information System (INIS)

Praveena, S.M.; Ahmed, A.; Radojevic, M.; Mohd Harun Abdullah; Aris, A.Z.

2007-01-01

This paper examines the tidal effects in the sediment of Mengkabong mangrove forest, Sabah. Generally, all the studied parameters showed high value at high tide compared to low tide. Factor-cluster analyses were adopted to allow the identification of controlling factors at high and low tides. Factor analysis extracted six controlling factors at high tide and seven controlling factors at low tide. Cluster analysis extracted two district clusters at high and low tides. The study showed that factor-cluster analysis application is a useful tool to single out the controlling factors at high and low tides. this will provide a basis for describing the tidal effects in the mangrove sediment. The salinity and electrical conductivity clusters as well as component loadings at high and low tide explained the tidal process where there is high contribution of seawater to mangrove sediments that controls the sediment chemistry. The geo accumulation index (T geo ) values suggest the mangrove sediments are having background concentrations for Al, Cu, Fe and Zn and unpolluted for Pb. (author)

Plant community structure in an oligohaline tidal marsh

Science.gov (United States)

Brewer, J.S.; Grace, J.B.

1990-01-01

An oligohaline tidal marsh on the northern shore of Lake Pontchartrain, LA was characterized with respect to the distributions and abundances of plant species over spatial and temporal gradients using Detrended Correspondence Analysis (DCA). In addition, the species distributions were correlated to several physical environmental factors using Detrended Canonical Correspondence Analysis (DCCA). The distributions of species were best correlated with distance from Lake Pontchartrain, and to a lesser extent with elevation and substrate organic matter. They were least correlated with mean soil salinity (referred to here as background salinity). Of the three mid-seasonal dominant species, the perennial grass, Spartina patens, is the most salt tolerant and was found closest to the lake. Further inland the dominant perennial was Sagittaria lancifolia, which has a salt tolerance less than that of Spartina patens. The perennial sedge, Cladium jamaicense, which is the least salt tolerant of the three, was dominant furthest inland. Background salinity levels were generally low (interactions likely also play a role in structuring the plant community. The distributions of several annuals depended on the size and life history of the mid-seasonal dominant perennials. Most of the annuals frequently co-occurred with Sagittaria lancifolia, which was the shortest in stature and had the least persistent canopy of the three mid-seasonal dominant perennials.

A water-quality study of the tidal Potomac River and Estuary: An overview

Science.gov (United States)

Callendar, Edward; Carter, Virginia; Hahl, D.C.; Hitt, Kerie; Schultz, Barbara I.

1984-01-01

The U.S. Geological Survey began a 5-year interdisciplinary study of the tidal Potomac River and Estuary in October of 1977. The objectives of the study are: (1) to provide a basic understanding of physical, chemical, and biological processes; (2) to develop flow and transport models to predict the movement and fate of nutrients and algaes and (3) to develop efficient techniques for the study of tidal rivers and estuaries. The ultimate goal is to aid water-quality decision-making for the tidal Potomac River and Estuary. The study is being conducted by scientists from many disciplines involved in 14 interrelated studies. These scientists are addressing five major problem areas: nutrient enrichment, algal blooms, dissolved oxygen, sedimentation, and effects of water quality on living resources. Preliminary results show that treatment of sewage has reduced the concentration load of organic carbon and phosphorus below that of the 1960's and 1970's, and changed the form of dissolved nitrogen in the tidal river. Concentrations of chlorophyll a during the study period were lower than those experienced during the massive algal blooms of the 1960's. Dissolved oxygen concentrations fluctuate in response to changes in algal populations, but remain above the Environmental Protection Agency limits during the summer low-flow period. Sedimentation rates have accelerated during the past 50-70 years due to urbanization and farming. Asian clams have recently invaded the tidal river; submersed aquatic vegetation has declined since the early 1900's, but conditions may now favor its return.

Soft-sediment deformation structures from an ice-marginal storm-tide interactive system, Permo-Carboniferous Talchir Formation, Talchir Coalbasin, India

Science.gov (United States)

Bhattacharya, H. N.; Bhattacharya, Biplab

2010-01-01

Permo-Carboniferous Talchir Formation, Talchir Coalbasin, India, records sedimentation during a phase of climatic amelioration in an ice-marginal storm-affected shelf. Evidences of subtidal processes are preserved only under thick mud drapes deposited during waning storm phases. Various soft-sediment deformation structures in some sandstone/siltstone-mudstone interbeds, like syn-sedimentary faults, deformed laminations, sand-silt flows, convolute laminations and various flame structures, suggest liquefaction and fluidization of the beds due to passage of syn-depositional seismic shocks. In the Late Paleozoic ice-marginal shelf, such earthquake tremors could be generated by crustal movements in response to glacioisostatic adjustments of the basin floor.

Turning the tide: comparison of tidal flow by periodic sea level fluctuation and by periodic bed tilting in scaled landscape experiments of estuaries

Science.gov (United States)

Kleinhans, Maarten G.; van der Vegt, Maarten; Leuven, Jasper; Braat, Lisanne; Markies, Henk; Simmelink, Arjan; Roosendaal, Chris; van Eijk, Arjan; Vrijbergen, Paul; van Maarseveen, Marcel

2017-11-01

Analogue models or scale experiments of estuaries and short tidal basins are notoriously difficult to create in the laboratory because of the difficulty to obtain currents strong enough to transport sand. Our recently discovered method to drive tidal currents by periodically tilting the entire flume leads to intense sediment transport in both the ebb and flood phase, causing dynamic channel and shoal patterns. However, it remains unclear whether tilting produces periodic flows with characteristic tidal properties that are sufficiently similar to those in nature for the purpose of landscape experiments. Moreover, it is not well understood why the flows driven by periodic sea level fluctuation, as in nature, are not sufficient for morphodynamic experiments. Here we compare for the first time the tidal currents driven by sea level fluctuations and by tilting. Experiments were run in a 20 × 3 m straight flume, the Metronome, for a range of tilting periods and with one or two boundaries open at constant head with free inflow and outflow. Also, experiments were run with flow driven by periodic sea level fluctuations. We recorded surface flow velocity along the flume with particle imaging velocimetry and measured water levels along the flume. We compared the results to a one-dimensional model with shallow flow equations for a rough bed, which was tested on the experiments and applied to a range of length scales bridging small experiments and large estuaries. We found that the Reynolds method results in negligible flows along the flume except for the first few metres, whereas flume tilting results in nearly uniform reversing flow velocities along the entire flume that are strong enough to move sand. Furthermore, tidal excursion length relative to basin length and the dominance of friction over inertia is similar in tidal experiments and reality. The sediment mobility converges between the Reynolds method and tilting for flumes hundreds of metres long, which is impractical

Turning the tide: comparison of tidal flow by periodic sea level fluctuation and by periodic bed tilting in scaled landscape experiments of estuaries

Directory of Open Access Journals (Sweden)

M. G. Kleinhans

2017-11-01

Full Text Available Analogue models or scale experiments of estuaries and short tidal basins are notoriously difficult to create in the laboratory because of the difficulty to obtain currents strong enough to transport sand. Our recently discovered method to drive tidal currents by periodically tilting the entire flume leads to intense sediment transport in both the ebb and flood phase, causing dynamic channel and shoal patterns. However, it remains unclear whether tilting produces periodic flows with characteristic tidal properties that are sufficiently similar to those in nature for the purpose of landscape experiments. Moreover, it is not well understood why the flows driven by periodic sea level fluctuation, as in nature, are not sufficient for morphodynamic experiments. Here we compare for the first time the tidal currents driven by sea level fluctuations and by tilting. Experiments were run in a 20  ×  3 m straight flume, the Metronome, for a range of tilting periods and with one or two boundaries open at constant head with free inflow and outflow. Also, experiments were run with flow driven by periodic sea level fluctuations. We recorded surface flow velocity along the flume with particle imaging velocimetry and measured water levels along the flume. We compared the results to a one-dimensional model with shallow flow equations for a rough bed, which was tested on the experiments and applied to a range of length scales bridging small experiments and large estuaries. We found that the Reynolds method results in negligible flows along the flume except for the first few metres, whereas flume tilting results in nearly uniform reversing flow velocities along the entire flume that are strong enough to move sand. Furthermore, tidal excursion length relative to basin length and the dominance of friction over inertia is similar in tidal experiments and reality. The sediment mobility converges between the Reynolds method and tilting for flumes hundreds of

Modeling Elevation Equilibrium and Human Adaptation in the Ganges-Brahmaputra Delta

Science.gov (United States)

Tasich, C. M.; Gilligan, J. M.; Goodbred, S. L., Jr.; Hale, R. P.; Wilson, C.

2017-12-01

The communities living in the low-lying tidal reaches of the Ganges-Brahmaputra delta rely on a system of polders (earthen-embanked landscapes) to prevent against tidal inundation and storm surge. These communities initially thrived as a result of poldering due to the increase in the total arable land, which presently helps sustain a population of 20 million people. However, poldering led to the unintended consequence of reducing water and sediment exchange between the polders and the tidal network, which has resulted in a significant elevation offset of 1-1.5 m relative to that of the natural landscape. This offset causes significant waterlogging which is problematic for rice cultivation. Engineering solutions, such as Tidal River Management (TRM), have been proposed to help alleviate this offset. Previous work suggests with proper implementation of TRM, polder elevations can successfully be reequilibrated to that of the natural elevation on timescales of 5-20 years. However, TRM implementation requires community commitment to allowing controlled tidal inundation. Here, we expand previous numerical simulations of sediment accumulation through field-based constraints of grain size, compaction, and sea level rise. We then model human decision-making for implementation of TRM practices using an agent-based model. Our sediment model employs a mass balance of sediment accumulation as a function of tidal height, suspended sediment concentration, settling velocity, and dry bulk density. We couple this sediment model to an agent-based model of human decision making. We model a hypothetical 500 x 300 m polder community with the lowest elevations in the middle and the highest elevations adjacent to the tidal channels. Landowners assess their risk and profit for future scenarios with and without TRM. All landowner decisions are aggregated and then a community decision is made on whether to implement TRM. Initial findings suggest that basic voting (majority rule) results in

Deterioration of atlantic soft water macrophyte communities by acidification, eutrophication and alkalinisation

NARCIS (Netherlands)

Arts, G.H.P.

2002-01-01

This review presents an overview of the most important succession patterns and underlying processes associated with the deterioration of soft water macrophyte communities in atlantic and boreo-atlantic regions. As acidification, eutrophication and alkalinisation are the dominant processes, this

Bivalve grazing can shape phytoplankton communities

Science.gov (United States)

Lucas, Lisa; Cloern, James E.; Thompson, Janet K.; Stacey, Mark T.; Koseff, Jeffrey K.

2016-01-01

The ability of bivalve filter feeders to limit phytoplankton biomass in shallow waters is well-documented, but the role of bivalves in shaping phytoplankton communities is not. The coupled effect of bivalve grazing at the sediment-water interface and sinking of phytoplankton cells to that bottom filtration zone could influence the relative biomass of sinking (diatoms) and non-sinking phytoplankton. Simulations with a pseudo-2D numerical model showed that benthic filter feeding can interact with sinking to alter diatom:non-diatom ratios. Cases with the smallest proportion of diatom biomass were those with the fastest sinking speeds and strongest bivalve grazing rates. Hydrodynamics modulated the coupled sinking-grazing influence on phytoplankton communities. For example, in simulations with persistent stratification, the non-sinking forms accumulated in the surface layer away from bottom grazers while the sinking forms dropped out of the surface layer toward bottom grazers. Tidal-scale stratification also influenced vertical gradients of the two groups in opposite ways. The model was applied to Suisun Bay, a low-salinity habitat of the San Francisco Bay system that was transformed by the introduction of the exotic clam Potamocorbula amurensis. Simulation results for this Bay were similar to (but more muted than) those for generic habitats, indicating that P. amurensis grazing could have caused a disproportionate loss of diatoms after its introduction. Our model simulations suggest bivalve grazing affects both phytoplankton biomass and community composition in shallow waters. We view these results as hypotheses to be tested with experiments and more complex modeling approaches.

Modelling of sediment transport at Muria peninsula coastal, Jepara

International Nuclear Information System (INIS)

Heni Susiati; Yarianto SBS; Wahyu Pandoe; Eko Kusratmoko; Aris Poniman

2010-01-01

Modelling of transport sediment modelling at Muria Peninsula have been done. In this study we had been used mathematical model that consist of hydrodynamics and sediment transport . Data input for modelling has been used tidal, monsoon wind, and river debit. Simulation result of sediment transport modelling showed that tides pattern and seasonal variations are the main causes of variations in the suspended sediment distribution in Muria Peninsula. (author)

Magnetically Assisted Bilayer Composites for Soft Bending Actuators

OpenAIRE

Jang, Sung-Hwan; Na, Seon-Hong; Park, Yong-Lae

2017-01-01

This article presents a soft pneumatic bending actuator using a magnetically assisted bilayer composite composed of silicone polymer and ferromagnetic particles. Bilayer composites were fabricated by mixing ferromagnetic particles to a prepolymer state of silicone in a mold and asymmetrically distributed them by applying a strong non-uniform magnetic field to one side of the mold during the curing process. The biased magnetic field induces sedimentation of the ferromagnetic particles toward o...

Teaching Soft Skills Employers Need

Science.gov (United States)

Ellis, Maureen; Kisling, Eric; Hackworth, Robbie G.

2014-01-01

This study identifies the soft skills community colleges teach in an office technology course and determines whether the skills taught are congruent with the soft skills employers require in today's entry-level office work. A qualitative content analysis of a community college office technology soft skills course was performed using 23 soft skills…

Profiling of Sediment Microbial Community in Dongting Lake before and after Impoundment of the Three Gorges Dam

Directory of Open Access Journals (Sweden)

Wei Huang

2016-06-01

Full Text Available The sediment microbial community in downstream-linked lakes can be affected by the operation of large-scale water conservancy projects. The present study determined Illumina reads (16S rRNA gene amplicons to analyze and compare the bacterial communities from sediments in Dongting Lake (China before and after impoundment of the Three Gorges Dam (TGD, the largest hydroelectric project in the world. Bacterial communities in sediment samples in Dongting Lake before impoundment of the TGD (the high water period had a higher diversity than after impoundment of the TGD (the low water period. The most abundant phylum in the sediment samples was Proteobacteria (36.4%–51.5%, and this result was due to the significant abundance of Betaproteobacteria and Deltaproteobacteria in the sediment samples before impoundment of the TGD and the abundance of Gammaproteobacteria in the sediment samples after impoundment of the TGD. In addition, bacterial sequences of the sediment samples are also affiliated with Acidobacteria (11.0% on average, Chloroflexi (10.9% on average, Bacteroidetes (6.7% on average, and Nitrospirae (5.1% on average. Variations in the composition of the bacterial community within some sediment samples from the river estuary into Dongting Lake were related to the pH values. The bacterial community in the samples from the three lake districts of Dongting Lake before and after impoundment of the TGD was linked to the nutrient concentration.

Impact of estuarine gradients on reductive dechlorination of 1,2,3,4-tetrachlorodibenzo-p-dioxin in river sediment enrichment cultures.

Science.gov (United States)

Dam, Hang T; Häggblom, Max M

2017-02-01

Polychlorinated dibenzo-p-dioxins (PCDDs) are among the most persistent organic pollutants. Although the total input of PCDDs into the environment has decreased substantially over the past four decades, their input via non-point sources is still increasing, especially in estuarine metropolitan areas. Here we report on the microbially mediated reductive dechlorination of PCDDs in anaerobic enrichment cultures established from sediments collected from five locations along the Hackensack River, NJ and investigate the impacts of sediment physicochemical characteristics on dechlorination activity. Dechlorination of 1,2,3,4-tetrachlorodibenzo-p-dioxin (1,2,3,4-TeCDD) and abundance of Dehalococcoides spp. negatively correlated with salinity and sulfate concentration in sediments used to establish the cultures. 1,2,3,4-TeCDD was dechlorinated to a lesser extent in cultures established from sediments from the tidally influenced estuarine mouth of the river. In cultures established from low salinity sediments, 1,2,3,4-TeCDD was reductively dechlorinated with the accumulation of 2-monochlorodibenzo-p-dioxin as the major product. Sulfate concentrations above 2 mM inhibited 1,2,3,4-TecDD dechlorination activity. Consecutive lateral- and peri- dechlorination took place in enrichment cultures with a minimal accumulation of 2,3-dichlorodibenzo-p-dioxin in active cultures. A Dehalococcoides spp. community was enriched and accounted for up to 64% of Chloroflexi detected in these sediment cultures. Copyright © 2016 Elsevier Ltd. All rights reserved.

Asymmetric fluxes of water and sediments in a mesotidal mudflat channel

Science.gov (United States)

Mariotti, G.; Fagherazzi, S.

2011-01-01

The hydrodynamics of a small tributary channel and its adjacent mudflat is studied in Willapa Bay, Washington State, USA. Velocity profiles and water levels are simultaneously measured at different locations in the channel and on the mudflat for two weeks. The above tidal flat and channel hydrodynamics differ remarkably during the tidal cycle. When the water surface level is above the tidal flat elevation, the channel is inactive. At this stage, the above tidal flat flow is predominantly aligned along the Bay axis, oscillating with the tide as a standing wave with peak velocities up to 0.3 m/s. When the mudflat becomes emergent, the flow concentrates in the channel. During this stage, current velocities up to 1 m/s are measured during ebb; and up to 0.6 m/s during flood. Standard equations for open-channel flow are utilized to study the channel hydrodynamics. From the continuity equation, a lateral inflow is predicted during ebb, which likely originates from the drainage of the mudflat through the lateral runnels. Both advective acceleration and lateral discharge terms, estimated directly from the velocity profiles, play a significant role in the momentum equation. The computed drag coefficient for bottom friction is small, due to an absence of vegetation and bottom bedforms in the channel. Sediment fluxes are calculated by combining flow and suspended sediment concentration estimated using the acoustic backscatter signal of the instruments. A net export of the sediment from the channel is found during ebb, which is not balanced by the sediment import during flood. When the mudflat is submerged, ebb-flood asymmetries in suspended sediment concentration are present, leading to a net sediment flux toward the inner part of the Willapa Bay. Finally, a residual flow is detected inside the channel at high slack water, probably associated with the thermohaline circulation.

Use of LH-PCR as a DNA fingerprint technique to trace sediment-associated microbial communities from various land uses

Science.gov (United States)

Joe-Strack, J. A.; Petticrew, E. L.

2012-04-01

The search for new techniques to effectively and efficiently trace sediment from its source along catchment pathways continues, with a range of new methods being developed and tested annually. A relatively recent approach marries genetic techniques to sediment analysis in order to characterize and differentiate the bacterial populations associated with soil and/or sediment originating from specific locations. Here we present the preliminary results of DNA fingerprint profiles of soil and sediment-associated bacterial communities in and around two different industrial land uses in the central interior of British Columbia, a feedlot and a copper/gold mining site. We assessed the naturally varying 16S rDNA gene using amplicon length heterogeneity-polymerase chain reaction (LH-PCR). Statistical differences between bacterial community profiles were investigated using a suite of methods of which non-metric multidimensional scaling (NMS) and indicator species analysis (ISA) were the most useful. Stronger statistical results were observed for the feedlot data set with spatial differences observed from the source location and within the adjacent creek. Results from the mine site were more difficult to assess although responses were detected in downstream waterways. While bacterial DNA fingerprinting of soil and sediment appears to be a promising tracing technique issues of scale and transferability may limit its use. Lessons learned from this preliminary study will be presented.

Mastering the soft skills in the implementation of work based learning among community college students

Science.gov (United States)

Ali, Azita Binti; Islamiah Rosli, Doria; Sujadi, Imam; Usodo, Budi; Adie Perdana, Fengky

2017-01-01

Emphasizing the aspects of soft skills among students is an important element to produce graduates who are competitive when facing any situations in the workplace. Various efforts have been taken by the Ministry of Education (MOE) and the Ministry of Higher Education Malaysia (MOHE) to improve the education system in Malaysia. Learning methods were introduced to ensure the education systems achieve the educational goals and to produce individuals who are well-balanced with spiritually, emotionally and physically. However, the issue of unemployment among graduates often being spoken in the community and it was regarded as a failure of educational institutions to produce quality graduates. Thus, the method of Work-Based Learning (WBL) was seen as a way to improve the soft skills among the graduates. The study was conducted using quantitative research survey as the design of the study used a questionnaire that was adapted as an instrument. Data were analysed using Statistical Package of Social Science (SPSS) version 20.0. The respondents were consisted of 97 students who attended WBL programs at the community college. Data were obtained from questionnaires using descriptive statistics for the calculation of the mean and one-way ANOVA test. The findings of the level of soft skills among community colleges were high where the communication skills obtained (mean = 4.1218), critical and problem solving skills (mean = 4.0946), teamwork skills (mean = 4.2297), learning and information management (mean = 4.1219), entrepreneurial skills (mean = 4.0240), professional ethics and moral (mean = 3.9410) and leadership skills (mean = 4.2104). The findings also showed the differences in term of communication skills among the community colleges. This study was significant to the community colleges to identify the level of soft skills among students who performed WBL methods in order to reduce the number of unemployment.

The influence of waves on the tidal kinetic energy resource at a tidal stream energy site

International Nuclear Information System (INIS)

Guillou, Nicolas; Chapalain, Georges; Neill, Simon P.

2016-01-01

Highlights: • We model the influence of waves on tidal kinetic energy in the Fromveur Strait. • Numerical results are compared with field data of waves and currents. • The introduction of waves improve predictions of tidal stream power during storm. • Mean spring tidal stream potential is reduced by 12% during extreme wave conditions. • Potential is reduced by 7.8% with waves forces and 5.3% with enhanced friction. - Abstract: Successful deployment of tidal energy converters relies on access to accurate and high resolution numerical assessments of available tidal stream power. However, since suitable tidal stream sites are located in relatively shallow waters of the continental shelf where tidal currents are enhanced, tidal energy converters may experience effects of wind-generated surface-gravity waves. Waves may thus influence tidal currents, and associated kinetic energy, through two non-linear processes: the interaction of wave and current bottom boundary layers, and the generation of wave-induced currents. Here, we develop a three-dimensional tidal circulation model coupled with a phase-averaged wave model to quantify the impact of the waves on the tidal kinetic energy resource of the Fromveur Strait (western Brittany) - a region that has been identified with strong potential for tidal array development. Numerical results are compared with in situ observations of wave parameters (significant wave height, peak period and mean wave direction) and current amplitude and direction 10 m above the seabed (the assumed technology hub height for this region). The introduction of waves is found to improve predictions of tidal stream power at 10 m above the seabed at the measurement site in the Strait, reducing kinetic energy by up to 9% during storm conditions. Synoptic effects of wave radiation stresses and enhanced bottom friction are more specifically identified at the scale of the Strait. Waves contribute to a slight increase in the spatial gradient of

Salinity shifts in marine sediment: Importance of number of fluctuation rather than their intensities on bacterial denitrifying community.

Science.gov (United States)

Zaghmouri, Imen; Michotey, Valerie D; Armougom, Fabrice; Guasco, Sophie; Bonin, Patricia C

2018-05-01

The sensitivity of denitrifying community to salinity fluctuations was studied in microcosms filled with marine coastal sediments subjected to different salinity disturbances over time (sediment under frequent salinity changes vs sediment with "stable" salinity pattern). Upon short-term salinity shift, denitrification rate and denitrifiers abundance showed high resistance whatever the sediment origin is. Denitrifying community adapted to frequent salinity changes showed high resistance when salinity increases, with a dynamic nosZ relative expression level. Marine sediment denitrifying community, characterized by more stable pattern, was less resistant when salinity decreases. However, after two successive variations of salinity, it shifted toward the characteristic community of fluctuating conditions, with larger proportion of Pseudomonas-nosZ, exhibiting an increase of nosZ relative expression level. The impact of long-term salinity variation upon bacterial community was confirmed at ribosomal level with a higher percentage of Pseudomonas and lower proportion of nosZII clade genera. Copyright © 2018 Elsevier Ltd. All rights reserved.

Macrobenthic assemblage in the soft sediment of Marmugao Harbour, Goa (central west coast of India)

Digital Repository Service at National Institute of Oceanography (India)

Ansari, Z.A.; Sreepada, R.A.; Kanti, A.; Gracias, E.S.

were identified. The communities were not discrete and there was some overlap in the occurrence of the families. Influence of anthropogenic disturbances and environmental factors such as sediment type and availability of food were responsible...

Sediment Trapping in Estuaries

Science.gov (United States)

Burchard, Hans; Schuttelaars, Henk M.; Ralston, David K.

2018-01-01

Estuarine turbidity maxima (ETMs) are generated by a large suite of hydrodynamic and sediment dynamic processes, leading to longitudinal convergence of cross-sectionally integrated and tidally averaged transport of cohesive and noncohesive suspended particulate matter (SPM). The relative importance of these processes for SPM trapping varies substantially among estuaries depending on topography, fluvial and tidal forcing, and SPM composition. The high-frequency dynamics of ETMs are constrained by interactions with the low-frequency dynamics of the bottom pool of easily erodible sediments. Here, we use a transport decomposition to present processes that lead to convergent SPM transport, and review trapping mechanisms that lead to ETMs at the landward limit of the salt intrusion, in the freshwater zone, at topographic transitions, and by lateral processes within the cross section. We use model simulations of example estuaries to demonstrate the complex concurrence of ETM formation mechanisms. We also discuss how changes in SPM trapping mechanisms, often caused by direct human interference, can lead to the generation of hyperturbid estuaries.

On the Non-Uniqueness of Sediment Yield

Science.gov (United States)

Kim, J.; Ivanov, V. Y.; Fatichi, S.

2014-12-01

There has been ample experimental evidence that soil erosion does not necessarily occur at the same rate, given the same amount of rainfall or runoff. Such a non-unique phenomenon has been often referred to in literature as due to 'natural variability'. Our recent study hypothesized that uncertainties in the distribution and properties of a sediment layer can be a potential clue to one of the reasons of the non-unique sediment yield. Specifically, numerical experimentation with a sophisticated two-dimensional model showed that a deposited layer plays two conflicting roles: it can both increase and decrease soil erosion, given the same magnitude of runoff. The difference in erodibilities of the "original, intact soil layer" and the "deposited, loose soil layer" and the composition of soil particles in the underlying layers give rise to the non-uniqueness of the amount of eroded materials. In continuing efforts, we attempt to investigate this phenomenon using a comprehensive the Universal Soil Loss Erosion (USLE) database, that contains data on paired hillslopes that show a high degree of non-uniqueness in the response, even though the hillslopes exhibit the same topography, soil type, rainfall and meteorological forcings, and landuse. An underlying hypothesis of this study is that uncertainties in the distribution of soil substrate prior to a rainfall event lead to low predictability skill, i.e., a stochastically-varying outcome. A large number of simulation cases demonstrating the proposed hypothesis are conducted using a coupled numerical model, tRIBS-VEGGIE-FEaST (Triangulated irregular network - based Real time Integrated Basin Simulator- VEGetation Generator for Interactive Evolution -Flow Erosion and Sediment Transport).

Prevalence of Methicillin Resistant Staphylococcus aureus in pyogenic community and hospital acquired skin and soft tissues infections

International Nuclear Information System (INIS)

Ahmad, M. K.; Asrar, A.

2014-01-01

Objective: To determine the percentage and frequency of Methicillin Resistant Staphylococcus aureus in community and hospital-acquired pyogenic skin and soft tissue infections. Methods: The descriptive cross-sectional study was conducted at the Dermatology Department of Combined Military Hospital, Abbottabad, from June 2009 to March 2010, and comprised 144 community-acquired and 54 hospital-acquired skin and soft tissue infections. Pus swabs from the infected lesions one from each individual were sent to laboratory for culture and sensitivity tests. Methicillin resistance was detected by 1 (mu) g oxacillin disk. Organisms were labelled methicillin-resistant once the inhibition zone for oxocillin was less than 10 mm. Data analysis was done by using SPSS 20. Results: Of the 198 patients in the study, 98(49.5%) were males and 100(50.5%) were females, with an overall mean age of 33.7+-14.8144 years. There were 144(72.72%) community-acquired infections and 54(27.27%) had hospital-acquired infections. Community-acquired Methicillin Resistant Staphylococcus aureus numbered 40(27.8%) and hospital-acquired ones numbered 26(48.1%). Conclusion: Prevalence of Methicillin Resistant Staphylococcus aureus in community and hospital-acquired pyogenic skin and soft tissue infections was high. (author)

Conditions for tidal bore formation in convergent alluvial estuaries

Science.gov (United States)

Bonneton, Philippe; Filippini, Andrea Gilberto; Arpaia, Luca; Bonneton, Natalie; Ricchiuto, Mario

2016-04-01

Over the last decade there has been an increasing interest in tidal bore dynamics. However most studies have been focused on small-scale bore processes. The present paper describes the first quantitative study, at the estuary scale, of the conditions for tidal bore formation in convergent alluvial estuaries. When freshwater discharge and large-scale spatial variations of the estuary water depth can be neglected, tide propagation in such estuaries is controlled by three main dimensionless parameters: the nonlinearity parameter ε0 , the convergence ratio δ0 and the friction parameter ϕ0. In this paper we explore this dimensionless parameter space, in terms of tidal bore occurrence, from a database of 21 estuaries (8 tidal-bore estuaries and 13 non tidal-bore estuaries). The field data point out that tidal bores occur for convergence ratios close to the critical convergence δc. A new proposed definition of the friction parameter highlights a clear separation on the parameter plane (ϕ0,ε0) between tidal-bore estuaries and non tidal-bore estuaries. More specifically, we have established that tidal bores occur in convergent estuaries when the nonlinearity parameter is greater than a critical value, εc , which is an increasing function of the friction parameter ϕ0. This result has been confirmed by numerical simulations of the two-dimensional Saint Venant equations. The real-estuary observations and the numerical simulations also show that, contrary to what is generally assumed, tide amplification is not a necessary condition for tidal bore formation. The effect of freshwater discharge on tidal bore occurrence has been analyzed from the database acquired during three long-term campaigns carried out on the Gironde/Garonne estuary. We have shown that in the upper estuary the tidal bore intensity is mainly governed by the local dimensionless tide amplitude ε. The bore intensity is an increasing function of ε and this relationship does not depend on freshwater

Microbial diversity and anaerobic hydrocarbon degradation potential in an oil-contaminated mangrove sediment

Directory of Open Access Journals (Sweden)

Andrade Luiza L

2012-08-01

Full Text Available Abstract Background Mangrove forests are coastal wetlands that provide vital ecosystem services and serve as barriers against natural disasters like tsunamis, hurricanes and tropical storms. Mangroves harbour a large diversity of organisms, including microorganisms with important roles in nutrient cycling and availability. Due to tidal influence, mangroves are sites where crude oil from spills farther away can accumulate. The relationship between mangrove bacterial diversity and oil degradation in mangrove sediments remains poorly understood. Results Mangrove sediment was sampled from 0–5, 15–20 and 35–40 cm depth intervals from the Suruí River mangrove (Rio de Janeiro, Brazil, which has a history of oil contamination. DGGE fingerprinting for bamA, dsr and 16S rRNA encoding fragment genes, and qPCR analysis using dsr and 16S rRNA gene fragment revealed differences with sediment depth. Conclusions Analysis of bacterial 16S rRNA gene diversity revealed changes with depth. DGGE for bamA and dsr genes shows that the anaerobic hydrocarbon-degrading community profile also changed between 5 and 15 cm depth, and is similar in the two deeper sediments, indicating that below 15 cm the anaerobic hydrocarbon-degrading community appears to be well established and homogeneous in this mangrove sediment. qPCR analysis revealed differences with sediment depth, with general bacterial abundance in the top layer (0–5 cm being greater than in both deeper sediment layers (15–20 and 35–40 cm, which were similar to each other.

Dynamic surface water-groundwater exchange and nitrogen transport in the riparian aquifer of a tidal river

Science.gov (United States)

Sawyer, A. H.; Barnes, R.; Wallace, C.; Knights, D.; Tight, D.; Bayer, M.

2017-12-01

Tides in coastal rivers can propagate tens to hundreds of kilometers inland and drive large daily changes in water and nitrogen exchange across the sediment-water interface. We use field observations and numerical models to illuminate hydrodynamic controls on nitrogen export from the riparian aquifer to a fresh, tidal reach of White Clay Creek (Delaware, USA). In the banks, an aerobic zone with high groundwater nitrate concentrations occurs near the fluctuating water table. Continuous depth-resolved measurements of redox potential suggest that this zone is relatively stable over tidal timescales but moves up or down in response to storms. The main source of dissolved oxygen is soil air that is imbibed in the zone of water table fluctuations, and the source of nitrate is likely nitrification of ammonium produced locally from the mineralization of organic matter in floodplain soils. Much of the nitrate is removed by denitrification along oscillating flow paths towards the channel. Within centimeters of the sediment-water interface, denitrification is limited by the mixing of groundwater with oxygen-rich river water. Our models predict that the benthic zones of tidal rivers play an important role in removing new nitrate inputs from discharging groundwater but may be less effective at removing nitrate from river water. Nitrate removal and production rates are expected to vary significantly along tidal rivers as permeability, organic matter content, tidal range vary. It is imperative that we understand nitrogen dynamics along tidal rivers and their role in nitrogen export to the coast.

Tidal asymmetry in a funnel-shaped estuary with mixed semidiurnal tides

Science.gov (United States)

Gong, Wenping; Schuttelaars, Henk; Zhang, Heng

2016-05-01

results show that the FDA exhibits a predominant tendency of shorter duration of low water slack, favoring the landward transport of fine sediment. The FVA demonstrates prevailing ebb dominance in the study period, favoring the seaward transport of coarse sediment. This ebb dominance is primarily induced by the interaction among the residual flow and the tidal constituents. The external TDA in the ocean experiences distinct cyclic variations with positive asymmetry when semidiurnal tides dominate and negative asymmetry during the periods when diurnal tides dominate. The funnel shape of the HE is advantageous for the development of positive tidal asymmetry as the semidiurnal tides are more amplified than the diurnal tides. The effect of river flow can enhance the ebb dominance, while the baroclinic effect is more complex. The existence of channel and shoals favors the development of residual pattern with seaward flow (ebb dominance) in the channel and landward flow (flood dominance) at the shoal when the tides are strong (semidiurnal tides dominate) and the residual pattern with landward flow (flood dominance) in the channel and seaward flow (ebb dominance) at the shoal when the baroclinic effect is dominant (diurnal tides dominate).

Algal stabilisation of estuarine sediments

International Nuclear Information System (INIS)

1992-01-01

The presence of benthic microalgae can increase the stability of intertidal sediments and influence sediment fluxes within an estuarine environment. Therefore the relative importance of algal stabilisation needs to be understood to help predict the effects of a tidal barrage. The biogenic stabilisation of intertidal estuarine sediments by epipelic diatom films and the macrophyte Vaucheria was studied at three sites on the Severn Estuary. The cohesive strength meter (CSM) was developed to measure surface critical shear stress with varied algal density. A number of techniques have been used to determine the general in situ erodibility of cohesive estuarine sediments. The measurements of sediment shear strength and critical erosion velocity were investigated. Field experiments were undertaken to investigate the effect of algae on binding sediments, and a predictive method for the assessment of sediment stabilisation by algal binding was developed. (author)

Analysis of effect of nicotine on microbial community structure in sediment using PCR-DGGE fingerprinting

Directory of Open Access Journals (Sweden)

Ai-dong Ruan

2015-10-01

Full Text Available Solid or liquid waste containing a high concentration of nicotine can pollute sediment in rivers and lakes, and may destroy the ecological balance if it is directly discharged into the environment without any treatment. In this study, the polymerase chain reaction (PCR and denaturing gradient gel electrophoresis (DGGE method was used to analyze the variation of the microbial community structure in the control and nicotine-contaminated sediment samples with nicotine concentration and time of exposure. The results demonstrated that the growth of some bacterial species in the nicotine-contaminated sediment samples was inhibited during the exposure. Some bacteria decreased in species diversity and in quantity with the increase of nicotine concentration or time of exposure, while other bacteria were enriched under the effect of nicotine, and their DGGE bands changed from undertones to deep colors. The microbial community structure, however, showed a wide variation in the nicotine-contaminated sediment samples, especially in the sediment samples treated with high-concentration nicotine. The Jaccard index was only 35.1% between the initial sediment sample and the sediment sample with a nicotine concentration of 0.030 μg/g after 28 d of exposure. Diversity indices showed that the contaminated groups had a similar trend over time. The diversity indices of contaminated groups all decreased in the first 7 d after exposure, then increased until day 42. It has been found that nicotine decreased the diversity of the microbial community in the sediment.

Analysis of effect of nicotine on microbial community structure in sediment using PCR-DGGE fingerprinting

Directory of Open Access Journals (Sweden)

Ai-dong Ruan

2015-10-01

Full Text Available Solid or liquid waste containing a high concentration of nicotine can pollute sediment in rivers and lakes, and may destroy the ecological balance if it is directly discharged into the environment without any treatment. In this study, the polymerase chain reaction (PCR and denaturing gradient gel electrophoresis (DGGE method was used to analyze the variation of the microbial community structure in the control and nicotine-contaminated sediment samples with nicotine concentration and time of exposure. The results demonstrated that the growth of some bacterial species in the nicotine-contaminated sediment samples was inhibited during the exposure. Some bacteria decreased in species diversity and in quantity with the increase of nicotine concentration or time of exposure, while other bacteria were enriched under the effect of nicotine, and their DGGE bands changed from undertones to deep colors. The microbial community structure, however, showed a wide variation in the nicotine-contaminated sediment samples, especially in the sediment samples treated with high-concentration nicotine. The Jaccard index was only 35.1% between the initial sediment sample and the sediment sample with a nicotine concentration of 0.030 μg/g after 28 d of exposure. Diversity indices showed that the contaminated groups had a similar trend over time. The diversity indices of contaminated groups all decreased in the first 7 d after exposure, then increased until day 42. It has been found that nicotine decreased the diversity of the microbial community in the sediment.

The Effect of Source Suspended Sediment Concentration on the Sediment Dynamics of a Macrotidal Creek and Salt Marsh

Science.gov (United States)

Poirier, E.; van Proosdij, D.; Milligan, T. G.

2017-12-01

Seasonal variability in the sediment dynamics of a Bay of Fundy tidal creek and salt marsh system was analyzed to better understand the ecomorphodynamics of a high suspended sediment concentration intertidal habitat. Data were collected over 62 tides for velocity, suspended sediment concentration, deposition, and grain size at four stations from the creek thalweg to the marsh surface. Five topographic surveys were also conducted throughout the 14-month study. Deposition rates per tide varied spatially from 56.4 g·m-2 at the creek thalweg to 15.3 g·m-2 at the marsh surface. Seasonal variations in deposition in the creek and marsh surface were from 38.0 g·m-2 to 97.7 g·m-2 and from 12.2 g·m-2 to 19.6 g·m-2 respectively. Deposition and erosion were greatest in late fall and winter. This seasonal change, led by higher suspended sediment concentrations, was observed in the creek and at the marsh bank but notably absent from the marsh edge and marsh surface. Sediments were predominantly deposited in floc form (76-83%). Because of high floc content, higher suspended sediment concentrations led to more rapid loss of sediment from suspension. With increasing sediment concentration, deposition increased in the tidal creek and at the marsh bank but not at the marsh edge or marsh surface. This suggests that in highly flocculated environments the water column clears fast enough that very little sediment remains in suspension when the water reaches the marsh and that the sediment concentration during marsh inundation is independent of the initial concentration in the creek.

Tidal day organic and inorganic material flux of ponds in the Liberty Island freshwater tidal wetland.

Science.gov (United States)

Lehman, Peggy W; Mayr, Shawn; Liu, Leji; Tang, Alison

2015-01-01

The loss of inorganic and organic material export and habitat produced by freshwater tidal wetlands is hypothesized to be an important contributing factor to the long-term decline in fishery production in San Francisco Estuary. However, due to the absence of freshwater tidal wetlands in the estuary, there is little information on the export of inorganic and organic carbon, nutrient or phytoplankton community biomass and the associated mechanisms. A single-day study was conducted to assess the potential contribution of two small vegetated ponds and one large open-water pond to the inorganic and organic material flux within the freshwater tidal wetland Liberty Island in San Francisco Estuary. The study consisted of an intensive tidal day (25.5 h) sampling program that measured the flux of inorganic and organic material at three ponds using continuous monitoring of flow, chlorophyll a, turbidity and salt combined with discrete measurements of phytoplankton community carbon, total and dissolved organic carbon and nutrient concentration at 1.5 h intervals. Vegetated ponds had greater material concentrations than the open water pond and, despite their small area, contributed up to 81% of the organic and 61% of the inorganic material flux of the wetland. Exchange between ponds was important to wetland flux. The small vegetated pond in the interior of the wetland contributed as much as 72-87% of the total organic carbon and chlorophyll a and 10% of the diatom flux of the wetland. Export of inorganic and organic material from the small vegetated ponds was facilitated by small-scale topography and tidal asymmetry that produced a 40% greater material export on ebb tide. The small vegetated ponds contrasted with the large open water pond, which imported 29-96% of the inorganic and 4-81% of the organic material into the wetland from the adjacent river. This study identified small vegetated ponds as an important source of inorganic and organic material to the wetland and the

Shallow stratigraphy of the Skagit River Delta, Washington, derived from sediment cores

Science.gov (United States)

Grossman, Eric E.; George, Douglas A.; Lam, Angela

2011-01-01

Sedimentologic analyses of 21 sediment cores, ranging from 0.4 to 9.6 m in length, reveal that the shallow geologic framework of the Skagit River Delta, western Washington, United States, has changed significantly since 1850. The cores collected from elevations of 3.94 to -2.41 m (relative to mean lower low water) along four cross-shore transects between the emergent marsh and delta front show relatively similar environmental changes across an area spanning ~75 km2. Offshore of the present North Fork Skagit River and South Fork Skagit River mouths where river discharge is focused by diked channels through the delta, the entire 5–7-km-wide tidal flats are covered with 1–2 m of cross-bedded medium-to-coarse sands. The bottoms of cores, collected in these areas are composed of mud. A sharp transition from mud to a cross-bedded sand unit indicates that the tidal flats changed abruptly from a calm environment to an energetic one. This is in stark contrast to the Martha's Bay tidal flats north of the Skagit Bay jetty that was completed in the 1940s to protect the newly constructed Swinomish Channel from flooding and sedimentation. North of the jetty, mud ranging from 1 to 2 m thick drapes a previously silt- and sand-rich tidal flat. The silty sand is a sediment facies that would be expected there where North Fork Skagit River sedimentation occurred prior to jetty emplacement. This report describes the compositional and textural properties of the sediment cores by using geophysical, photographic, x-radiography, and standard sediment grain-size and carbon-analytical methods. The findings help to characterize benthic habitat structure and sediment transport processes and the environmental changes that have occurred across the nearshore of the Skagit River Delta. The findings will be useful for quantifying changes to nearshore marine resources, including impacts resulting from diking, river-delta channelization, shoreline development, and natural variations in fluvial-sediment

Community Composition of Nitrous Oxide-Related Genes in Salt Marsh Sediments Exposed to Nitrogen Enrichment.

Science.gov (United States)

Angell, John H; Peng, Xuefeng; Ji, Qixing; Craick, Ian; Jayakumar, Amal; Kearns, Patrick J; Ward, Bess B; Bowen, Jennifer L

2018-01-01

Salt marshes provide many key ecosystem services that have tremendous ecological and economic value. One critical service is the removal of fixed nitrogen from coastal waters, which limits the negative effects of eutrophication resulting from increased nutrient supply. Nutrient enrichment of salt marsh sediments results in higher rates of nitrogen cycling and, commonly, a concurrent increase in the flux of nitrous oxide, an important greenhouse gas. Little is known, however, regarding controls on the microbial communities that contribute to nitrous oxide fluxes in marsh sediments. To address this disconnect, we generated profiles of microbial communities and communities of micro-organisms containing specific nitrogen cycling genes that encode several enzymes ( amoA, norB, nosZ) related to nitrous oxide flux from salt marsh sediments. We hypothesized that communities of microbes responsible for nitrogen transformations will be structured by nitrogen availability. Taxa that respond positively to high nitrogen inputs may be responsible for the elevated rates of nitrogen cycling processes measured in fertilized sediments. Our data show that, with the exception of ammonia-oxidizing archaea, the community composition of organisms involved in the production and consumption of nitrous oxide was altered under nutrient enrichment. These results suggest that previously measured rates of nitrous oxide production and consumption are likely the result of changes in community structure, not simply changes in microbial activity.

Three-dimensional semi-idealized model for estuarine turbidity maxima in tidally dominated estuaries

NARCIS (Netherlands)

Kumar, Mohit; Schuttelaars, Henk M.; Roos, Pieter C.

2017-01-01

We develop a three-dimensional idealized model that is specifically aimed at gaining insight in the physical mechanisms resulting in the formation of estuarine turbidity maxima in tidally dominated estuaries. First, the three-dimensional equations for water motion and suspended sediment

Modelling the impacts of sea level rise on tidal basin ecomorphodynamics and mangrove habitat evolution

Science.gov (United States)

van Maanen, Barend; Coco, Giovanni; Bryan, Karin

2016-04-01

The evolution of tidal basins and estuaries in tropical and subtropical regions is often influenced by the presence of mangrove forests. These forests are amongst the most productive environments in the world and provide important ecosystem services. However, these intertidal habitats are also extremely vulnerable and are threatened by climate change impacts such as sea level rise. It is therefore of key importance to improve our understanding of how tidal systems occupied by mangrove vegetation respond to rising water levels. An ecomorphodynamic model was developed that simulates morphological change and mangrove forest evolution as a result of mutual feedbacks between physical and biological processes. The model accounts for the effects of mangrove trees on tidal flow patterns and sediment dynamics. Mangrove growth is in turn controlled by hydrodynamic conditions. Under stable water levels, model results indicate that mangrove trees enhance the initiation and branching of tidal channels, partly because the extra flow resistance in mangrove forests favours flow concentration, and thus sediment erosion in between vegetated areas. The landward expansion of the channels, on the other hand, is reduced. Model simulations including sea level rise suggest that mangroves can potentially enhance the ability of the soil surface to maintain an elevation within the upper portion of the intertidal zone. While the sea level is rising, mangroves are migrating landward and the channel network tends to expand landward too. The presence of mangrove trees, however, was found to hinder both the branching and headward erosion of the landward expanding channels. Simulations are performed according to different sea level rise scenarios and with different tidal range conditions to assess which tidal environments are most vulnerable. Changes in the properties of the tidal channel networks are being examined as well. Overall, model results highlight the role of mangroves in driving the

Temporal record of Pu isotopes in inter-tidal sediments from the northeastern Irish Sea

Energy Technology Data Exchange (ETDEWEB)

Lindahl, Patric, E-mail: patriclindahl@yahoo.com [School of Geography, Earth and Environmental Sciences, University of Plymouth, Drake Circus, Plymouth PL4 8AA (United Kingdom); Worsfold, Paul; Keith-Roach, Miranda [School of Geography, Earth and Environmental Sciences, University of Plymouth, Drake Circus, Plymouth PL4 8AA (United Kingdom); Andersen, Morten B. [Bristol Isotope Group, School of Earth Sciences, University of Bristol, Wills Memorial Building, Bristol BS8 1RJ (United Kingdom); Kershaw, Peter; Leonard, Kins [The Centre for Environment, Fisheries and Aquaculture Science, Lowestoft Laboratory, Pakefield Road, Suffolk NR33 0HT (United Kingdom); Choi, Min-Seok [Division of Earth and Environmental Science, Korea Basic Science Institute, 113 Gwahangno, Yusung-gu, Daejon 305-333 (Korea, Republic of); Boust, Dominique [Laboratoire de Radioecologie, Institut de Radioprotection et de Surete Nucleaire, BP 10, 50130 Cherbourg-Octeville (France); Lesueur, Patrick [University of Caen Basse Normandie, M2C UMR CNRS 6143, 14000 Caen (France)

2011-11-01

A depth profile of {sup 239}Pu and {sup 240}Pu specific activities and isotope ratios was determined in an inter-tidal sediment core from the Esk Estuary in the northeastern Irish Sea. The study site has been impacted with plutonium through routine radionuclide discharges from the Sellafield nuclear reprocessing plant in Cumbria, NW England. A pronounced sub-surface maximum of {approx} 10 kBq kg{sup -1} was observed for {sup 239+240}Pu, corresponding to the peak in Pu discharge from Sellafield in 1973, with a decreasing trend with depth down to {approx} 0.04 kBq kg{sup -1} in the deeper layers. The depth profile of {sup 239+240}Pu specific activities together with results from gamma-ray spectrometry for {sup 137}Cs and {sup 241}Am was compared with reported releases from the Sellafield plant in order to estimate a reliable sediment chronology. The upper layers (1992 onwards) showed higher {sup 239+240}Pu specific activities than would be expected from the direct input of annual Sellafield discharges, indicating that the main input of Pu is from the time-integrated contaminated mud patch of the northeastern Irish Sea. The {sup 240}Pu/{sup 239}Pu atom ratios ranged from {approx} 0.03 in the deepest layers to > 0.20 in the sub-surface layers with an activity-weighted average of 0.181. The decreasing {sup 240}Pu/{sup 239}Pu atom ratio with depth reflects the changing nature of operations at the Sellafield plant from weapons-grade Pu production to reprocessing spent nuclear fuel with higher burn-up times in the late 1950s. In addition, recent annual {sup 240}Pu/{sup 239}Pu atom ratios in winkles collected during 2003-2008 from three stations along the Cumbrian coastline showed no significant spatial or temporal differences with an overall average of 0.204, which supports the hypothesis of diluted Pu input from the contaminated mud patch. - Highlights: {yields} Depth profiles of {sup 239}Pu and {sup 240}Pu determined in a northeastern Irish Sea sediment. {yields

Spatial distribution of planktonic bacterial and archaeal communities in the upper section of the tidal reach in Yangtze River

Science.gov (United States)

Fan, Limin; Song, Chao; Meng, Shunlong; Qiu, Liping; Zheng, Yao; Wu, Wei; Qu, Jianhong; Li, Dandan; Zhang, Cong; Hu, Gengdong; Chen, Jiazhang

2016-01-01

Bacterioplankton and archaeaplankton communities play key roles in the biogeochemical processes of water, and they may be affected by many factors. In this study, we used high-throughput 16S rRNA gene sequencing to profile planktonic bacterial and archaeal community compositions in the upper section of the tidal reach in Yangtze River. We found that the predominant bacterial phyla in this river section were Proteobacteria, Firmicutes, and Actinobacteria, whereas the predominant archaeal classes were Halobacteria, Methanomicrobia, and unclassified Euryarchaeota. Additionally, the bacterial and archaeal community compositions, richnesses, functional profiles, and ordinations were affected by the spatial heterogeneity related to the concentration changes of sulphate or nitrate. Notably, the bacterial community was more sensitive than the archaeal community to changes in the spatial characteristics of this river section. These findings provide important insights into the distributions of bacterial and archaeal communities in natural water habitats. PMID:27966673

Holocene depocenter migration and sediment accumulation in Delaware Bay: A submerging marginal marine sedimentary basin

Science.gov (United States)

Fletcher, C. H.; Knebel, H.J.; Kraft, J.C.

1992-01-01

The Holocene transgression of the Delaware Bay estuary and adjacent Atlantic coast results from the combined effect of regional crustal subsidence and eustasy. Together, the estuary and ocean coast constitute a small sedimentary basin whose principal depocenter has migrated with the transgression. A millenial time series of isopach and paleogeographic reconstructions for the migrating depocenter outlines the basin-wide pattern of sediment distribution and accumulation. Upland sediments entering the basin through the estuarine turbidity maximum accumulate in tidal wetland or open water sedimentary environments. Wind-wave activity at the edge of the tidal wetlands erodes the aggraded Holocene section and builds migrating washover barriers. Along the Atlantic and estuary coasts of Delaware, the area of the upland environment decreases from 2.0 billion m2 to 730 million m2 during the transgression. The area of the tidal wetland environment increases from 140 million to 270 million m2, and due to the widening of the estuary the area of open water increases from 190 million to 1.21 billion m2. Gross uncorrected rates of sediment accumulation for the tidal wetlands decrease from 0.64 mm/yr at 6 ka to 0.48 mm/yr at 1 ka. In the open water environments uncorrected rates decrease from 0.50 mm/yr to 0.04 mm/yr over the same period. We also present data on total sediment volumes within the tidal wetland and open water environments at specific intervals during the Holocene. 

Sulphur-oxidizing and sulphate-reducing communities in Brazilian mangrove sediments.

Science.gov (United States)

Varon-Lopez, Maryeimy; Dias, Armando Cavalcante Franco; Fasanella, Cristiane Cipolla; Durrer, Ademir; Melo, Itamar Soares; Kuramae, Eiko Eurya; Andreote, Fernando Dini

2014-03-01

Mangrove soils are anaerobic environments rich in sulphate and organic matter. Although the sulphur cycle is one of the major actors in this ecosystem, little is known regarding the sulphur bacteria communities in mangrove soils. We investigated the abundance, composition and diversity of sulphur-oxidizing (SOB) and sulphate-reducing (SRB) bacteria in sediments from three Brazilian mangrove communities: two contaminated, one with oil (OilMgv) and one with urban waste and sludge (AntMgv), and one pristine (PrsMgv). The community structures were assessed using quantitative real-time polymerase chain reaction (qPCR), polymerase chain reaction-denaturing gradient gel electrophoresis (PCR-DGGE) and clone libraries, using genes for the enzymes adenosine-5'-phosphosulphate reductase (aprA) and sulphite reductase (Dsr) (dsrB). The abundance for qPCR showed the ratio dsrB/aprA to be variable among mangroves and higher according to the gradient observed for oil contamination in the OilMgv. The PCR-DGGE patterns analysed by Nonmetric Multidimensional Scaling revealed differences among the structures of the three mangrove communities. The clone libraries showed that Betaproteobacteria, Gammaproteobacteria and Deltaproteobacteria were the most abundant groups associated with sulphur cycling in mangrove sediments. We conclude that the microbial SOB and SRB communities in mangrove soils are different in each mangrove forest and that such microbial communities could possibly be used as a proxy for contamination in mangrove forests. © 2013 John Wiley & Sons Ltd and Society for Applied Microbiology.

Sociocultural Adaptation of Caboclos Communities to Extreme Tidal ...

International Development Research Centre (IDRC) Digital Library (Canada)

Over the past 30 years, the Caboclos peoples of the Amazon region have noticed changes in the tidal floods, known locally as lançantes, on the floodplains of the Amazon Estuary, Brazil. These changes have had an adverse effect on traditional crop production, as well as some positive effects on traditional agroforestry, ...

Sediment Sources and Transport Pathway Identification Based on Grain-Size Distributions on the SW Coast of Portugal

Directory of Open Access Journals (Sweden)

Xiaoqin Du

2015-01-01

Full Text Available Espichel-Sines is an embayed coast in SW Portugal, consisting of two capes at both extremities, a tidal inlet and associated ebb tidal delta, a barrier spit, sandy beaches, sea cliffs, and a submarine canyon. Beach berm, backshore, near shore and inner shelf sediment samples were taken. Samples were analyzed for their grain-size compositions. This study ranks the hypothetical sediment sources influences on the sediment distributions in the study area using the multivariate Empirical Orthogonal Function (EOF techniques. Transport pathways in this study were independently identified using the grain size trend analysis (GSTA technique to verify the EOF findings. The results show that the cliff-erosion sediment is composed of pebbles and sand and is the most important sediment source for the entire embayment. The sediment at the inlet mouth is a mixture of pebbles, sand, silt, and clay, which is a minor sediment source that only has local influence. The overall grain-size distributions on the shelf are dominated by the sand except for the high mud content around the tidal delta front in the northern embayment. Sediment transport patterns on the inner shelf at the landward and north sides of the canyon head are landward and northward along the barrier spit, respectively. On the south side of the canyon head, the prevailing sediment transport is seaward. Sediment transport occurs in both directions along the shore.

Nitrogen cycling processes and microbial community composition in bed sediments in the Yukon River at Pilot Station

Science.gov (United States)

Repert, Deborah A.; Underwood, Jennifer C.; Smith, Richard L.; Song, Bongkeun

2014-01-01

Information on the contribution of nitrogen (N)-cycling processes in bed sediments to river nutrient fluxes in large northern latitude river systems is limited. This study examined the relationship between N-cycling processes in bed sediments and N speciation and loading in the Yukon River near its mouth at the Bering Sea. We conducted laboratory bioassays to measure N-cycling processes in sediment samples collected over distinct water cycle seasons. In conjunction, the microbial community composition in the bed sediments using genes involved in N-cycling (narG, napA, nosZ, and amoA) and 16S rRNA gene pyrosequences was examined. Temporal variation was observed in net N mineralization, nitrate uptake, and denitrification rate potentials and correlated strongly with sediment carbon (C) and extractable N content and microbial community composition rather than with river water nutrient concentrations. The C content of the bed sediment was notably impacted by the spring flood, ranging from 1.1% in the midst of an ice-jam to 0.1% immediately after ice-out, suggesting a buildup of organic material (OM) prior to scouring of the bed sediments during ice break up. The dominant members of the microbial community that explained differences in N-processing rates belonged to the genera Crenothrix,Flavobacterium, and the family of Comamonadaceae. Our results suggest that biogeochemical processing rates in the bed sediments appear to be more coupled to hydrology, nutrient availability in the sediments, and microbial community composition rather than river nutrient concentrations at Pilot Station.

On the ecogeomorphological feedbacks that control tidal channel network evolution in a sandy mangrove setting

Science.gov (United States)

van Maanen, B.; Coco, G.; Bryan, K. R.

2015-01-01

An ecomorphodynamic model was developed to study how Avicennia marina mangroves influence channel network evolution in sandy tidal embayments. The model accounts for the effects of mangrove trees on tidal flow patterns and sediment dynamics. Mangrove growth is in turn controlled by hydrodynamic conditions. The presence of mangroves was found to enhance the initiation and branching of tidal channels, partly because the extra flow resistance in mangrove forests favours flow concentration, and thus sediment erosion in between vegetated areas. The enhanced branching of channels is also the result of a vegetation-induced increase in erosion threshold. On the other hand, this reduction in bed erodibility, together with the soil expansion driven by organic matter production, reduces the landward expansion of channels. The ongoing accretion in mangrove forests ultimately drives a reduction in tidal prism and an overall retreat of the channel network. During sea-level rise, mangroves can potentially enhance the ability of the soil surface to maintain an elevation within the upper portion of the intertidal zone, while hindering both the branching and headward erosion of the landward expanding channels. The modelling results presented here indicate the critical control exerted by ecogeomorphological interactions in driving landscape evolution. PMID:26339195

Nitrogen dynamics in the tidal freshwater Potomac River, Maryland and Virginia, water years 1979-81: A water-quality study of the tidal Potomac River and estuary

International Nuclear Information System (INIS)

Shutz, D.J.

1989-01-01

On an annual basis, river supplied nitrate is the predominant form of N supplied to the tidal Potomac River from external sources. Much of the nitrate is associated with high flows that have rapid transit times through the tidal river. After the fall of 1980, initiation of advanced wastewater treatment at the Blue Plains Sewage Treatment Plant (STPP) reduced ammonia loading to the river by 90% and increased nitrate loading by a similar percentage. As a result, concentrations of ammonia during the 1981 low flow period were 1.50 mg/L as N. Despite the reduced availability of ammonia, 15-N uptake studies showed that phytoplankton preferred ammonia to nitrate unless ammonia concentrations were < 0.10 mg/L as N. Nitrification studies during 1981 using a 14-C uptake technique indicate that rates did not vary with sample location, except for one sample from the head of the tidal river, where the rates were much higher. Process models were used in conjunction with mass-balance determinations and individual process studies to estimate rates of processes that were not directly measured. It is estimated that denitrification removed 10 times as much nitrate from the water column during the summer of 1981 as during the summer of 1980. Sedimentation of particulate N is estimated to be the largest sink for N from the water column and was approximately equal to the external annual loading of all N constituents on a daily basis. In summer, when river flows usually are low, the tidal Potomac River appears to be a partially closed system rather than one dominated by transport. Nitrogen constituents, primarily from point sources, are taken up by phytoplankton converted to organic matter, and sedimented from the water column. Some of this N eventually becomes available again by means of benthic exchange. Removal, by transport, out of the tidal river is significant only during winter. 70 refs., 20 figs., 10 tabs

A comparison of microbial communities in deep-sea polymetallic nodules and the surrounding sediments in the Pacific Ocean

Science.gov (United States)

Wu, Yue-Hong; Liao, Li; Wang, Chun-Sheng; Ma, Wei-Lin; Meng, Fan-Xu; Wu, Min; Xu, Xue-Wei

2013-09-01

Deep-sea polymetallic nodules, rich in metals such as Fe, Mn, and Ni, are potential resources for future exploitation. Early culturing and microscopy studies suggest that polymetallic nodules are at least partially biogenic. To understand the microbial communities in this environment, we compared microbial community composition and diversity inside nodules and in the surrounding sediments. Three sampling sites in the Pacific Ocean containing polymetallic nodules were used for culture-independent investigations of microbial diversity. A total of 1013 near full-length bacterial 16S rRNA gene sequences and 640 archaeal 16S rRNA gene sequences with ~650 bp from nodules and the surrounding sediments were analyzed. Bacteria showed higher diversity than archaea. Interestingly, sediments contained more diverse bacterial communities than nodules, while the opposite was detected for archaea. Bacterial communities tend to be mostly unique to sediments or nodules, with only 13.3% of sequences shared. The most abundant bacterial groups detected only in nodules were Pseudoalteromonas and Alteromonas, which were predicted to play a role in building matrix outside cells to induce or control mineralization. However, archaeal communities were mostly shared between sediments and nodules, including the most abundant OTU containing 290 sequences from marine group I Thaumarchaeota. PcoA analysis indicated that microhabitat (i.e., nodule or sediment) seemed to be a major factor influencing microbial community composition, rather than sampling locations or distances between locations.

Finite Element Barotropic Model for the Indian and Western Pacific OceanBasin: Tidal Model Data Comparisons and Sensitivities

Science.gov (United States)

2018-01-11

sediments (oozes and clays) CJ is set to 2.5x10- 3 as a default roughness. Relative sediment density s = 1.722 (dry bulk density by mass of sand , Rijn...dso and relative density s for each sediment type used in the calculation of CJ Sediment Type Gravel and coarser Sand Silt Ash and volcanic sand ...FUGAWI navigational charts allowed the tidal elevation to reach close to the measured M2 amplitude. Clearly, greater availability and quality of

Holocene soft-sediment deformation of the Santa Fe-Sopetrán Basin, northern Colombian Andes: Evidence for pre-Hispanic seismic activity?

Science.gov (United States)

Suter, F.; Martínez, J. I.; Vélez, M. I.

2011-04-01

The detailed study of four deformed intervals from the Holocene fluvio-lacustrine deposits of the Santa Fe-Sopetrán Basin in northern Colombia shows 17 types of soft-sediment deformation (SSD) structures. Evidence indicates that seismic activity was responsible for the SSD structures, a conclusion reached after considering the environmental conditions at the time of sediment deposition and shortly after, and the detailed analysis of the driving force systems. Other triggers (i.e. overloading and rapid sedimentation), however, are not discarded. Intervals showing SSD structures occurred at centennial frequencies and apparently resulted from Mw 6-7 earthquakes. The Holocene age of these major shaking events should be seriously considered when evaluating the seismic hazard and risk for the middle Cauca Valley and the nearby city of Medellín with 3 million inhabitants.

Sedimentary structures of tidal flats: A journey from coast to inner ...

Indian Academy of Sciences (India)

defined by the time available to move water masses. This, in turn, affects the development of sedi- mentary structures as well as the distribution of organisms in the intertidal zone and therefore, the animal-sediment relationship. Ever since the systematic study for the identi- fication of tidal flat environment in rock records.

A new CT scan methodology to characterize a small aggregation gravel clast contained in a soft sediment matrix

Science.gov (United States)

Fouinat, Laurent; Sabatier, Pierre; Poulenard, Jérôme; Reyss, Jean-Louis; Montet, Xavier; Arnaud, Fabien

2017-03-01

Over the past decades, X-ray computed tomography (CT) has been increasingly applied in the geosciences community. CT scanning is a rapid, non-destructive method allowing the assessment of relative density of clasts in natural archives samples. This study focuses on the use of this method to explore instantaneous deposits as major contributors to sedimentation of high-elevation lakes in the Alps, such as the Lake Lauvitel system (western French Alps). This lake is located within a very steep valley prone to episodic flooding and features gullies ending in the lake. This variety of erosion processes leads to deposition of sedimentary layers with distinct clastic properties. We identified 18 turbidites and 15 layers of poorly sorted fine sediment associated with the presence of gravels since AD 1880. These deposits are respectively interpreted as being induced by flood and wet avalanche. This constitutes a valuable record from a region where few historical records exist. This CT scan approach is suitable for instantaneous deposit identification to reconstruct past evolution and may be applicable to a wider variety of sedimentary archives alongside existing approaches.

Modified niche optima and breadths explain the historical contingency of bacterial community responses to eutrophication in coastal sediments

KAUST Repository

Fodelianakis, Stylianos

2016-09-23

Previous studies have shown that the response of bacterial communities to disturbances depends on their environmental history. Historically fluctuating habitats host communities that respond better to disturbance than communities of historically stable habitats. However, the exact ecological mechanism that drives this dependency remains unknown. Here, we experimentally demonstrate that modifications of niche optima and niche breadths of the community members are driving this dependency of bacterial responses to past environmental conditions. First, we develop a novel, simple method to calculate the niche optima and breadths of bacterial taxa regarding single environmental gradients. Then, we test this method on sediment bacterial communities of three habitats, one historically stable and less loaded and two historically more variable and more loaded habitats in terms of historical chlorophyll-α water concentration, that we subject to hypoxia via organic matter addition ex situ. We find that communities containing bacterial taxa differently adapted to hypoxia show different structural and functional responses, depending on the sediment\\'s environmental history. Specifically, in the historically less fluctuating and loaded sediments where we find more taxa poorly adapted to hypoxic conditions, communities change a lot over time and organic matter is not degraded efficiently. The opposite is true for the historically more fluctuating and loaded sediments where we find more taxa well adapted to hypoxia. Based on the community responses observed here, we also propose an alternative calculation of community resistance that takes into account how rapidly the communities respond to disturbances and not just the initial and final states of the community.

Molluscs of an intertidal soft-sediment area in China: Does overfishing explain a high density but low diversity community that benefits staging shorebirds?

Science.gov (United States)

Yang, Hong-Yan; Chen, Bing; Piersma, Theunis; Zhang, Zhengwang; Ding, Changqing

2016-03-01

The Yellow Sea is a key staging ground for shorebirds that migrate from Australasia to the Arctic each spring. A lot of attention has been paid to the impact of habitat loss due to land reclamation on shorebird survival, but any effects of overfishing of coastal resources are unclear. In this study, the abundance of molluscs in the intertidal mudflats of northern Bohai Bay on the Chinese Yellow Sea was investigated in 2008-2014 from the perspective of their importance as food for northward migrating shorebirds, especially Red Knots Calidris canutus. Numerically contributing 96% to the numbers of 17 species found in spring 2008, the bivalve Potamocorbula laevis (the staple food of Red Knots and other shorebirds) dominated the intertidal mollusc community. In the spring of 2008-2014, the densities of P. laevis were surprisingly high, varying between 3900 and 41,000 individuals/m2 at distinctly small sizes (average shell lengths of 1.1 to 4.8 mm), and thus reaching some of the highest densities of marine bivalves recorded worldwide and providing good food for shorebirds. The distribution of P. laevis was associated with relatively soft sediments in close proximity to the recently built seawalls. A monthly sampling programme showed steep seasonal changes in abundance and size. P. laevis were nearly absent in winter, each year settling on the intertidal mudflats anew. Peak densities were reached in spring, when 0-age P. laevis were 1-3 mm long. The findings point to a highly unusual demographic structure of the species, suggesting that some interfering factors are at play. We hypothesise that the current dominance of young P. laevis in Bohai Bay reflects the combined pressures of a nearly complete active removal of adult populations from mid-summer to autumn for shrimp farming (this clearing of adults may offer space for recruitment during the next spring) and low numbers of epibenthic predators of bivalves, such as shrimps and crabs, due to persistent overfishing in

Coastal marsh degradation: modeling the influence of vegetation die-off patterns on flow and sedimentation

Science.gov (United States)

Schepers, Lennert; Wang, Chen; Kirwan, Matthew; Belluco, Enrica; D'Alpaos, Andrea; Temmerman, Stijn

2014-05-01

Coastal marshes are vulnerable ecosystems that provide ecosystem functions such as storm protection and carbon sequestration. However, degradation of vegetated marshes into bare tidal flats or open water has been reported as a worldwide phenomenon, threatening their valuable wetland functions. Moreover, tidal marshes and bare flats are considered as alternative stable ecosystem states, which implies that, once vegetated marshes have degraded to bare flats, the (re)conversion from bare flats to marsh vegetation may be very difficult. Recent aerial photo analysis has demonstrated that the degradation or die-off of a marsh area is a spatial process, whereby vegetation is typically replaced by non-vegetated areas in the form of interior marsh pools, also known as ponds or marsh basins. On a small scale, these pools have similar characteristics among different marshes worldwide: pools that are located further away from tidal channels and with broad channel connections to the tidal channel system appear to have low surface elevations and a low probability for marsh recovery (this is re-establishment of vegetation on the surface). Interior pools located closer to, but that are not connected to channels on the other hand, are positioned on higher elevations and are more likely to recover. These findings may have important implications for the restoration potential of degraded marshes and their functions. We hypothesize that bio-geomorphologic interactions are the main mechanisms causing these differences in elevation and recovery potential of interior marsh pools: pools that are not connected to the channel system, are separated from the channel by vegetation, which reduces the flow velocity, increases sedimentation and may explain our observation of higher surface elevation of this type of pools. In contrast, pools that are connected with the channel system are not protected by vegetation and will experience higher flow velocities and lower sedimentation rates or even

Vertical distribution and community composition of anammox bacteria in sediments of a eutrophic shallow lake.

Science.gov (United States)

Qin, H; Han, C; Jin, Z; Wu, L; Deng, H; Zhu, G; Zhong, W

2018-07-01

The aim of this study was to explore the vertical distribution traits of anaerobic ammonium-oxidizing (anammox) bacterial relative abundance and community composition along the oxic/anoxic sediment profiles in a shallow lake. The Illumina Miseq-based sequencing and quantitative polymerase chain reactions were utilized to analyse relative abundance of anammox hydrazine synthase (hzsB) gene in comparison with bacterial 16S rRNA genes, anammox bacterial relative abundance (the number of anammox sequences divided by total number of sequences), community composition and diversity in sediments. The relative abundance of hzsB gene at the low-nitrogen (LN) site in the lake sediments showed that the vertical distribution of anammox bacteria increased to a peak, then decreased with increasing depth. Moreover, the relative abundance of hzsB gene at the high-nitrogen site was significantly lower than that at the LN site. Additionally, the community composition results showed that Candidatus Brocadia sp. was the dominant genus. In addition, the anammox bacterial diversity was also site specific. Redundancy analysis showed that the total N and the NH 4 + -N content might be the most important factors affecting anammox bacterial community composition in the studied sites. The results revealed the specific vertical variance of anammox bacterial distribution and community composition in oxic/anoxic sediments of a eutrophic shallow lake. This is the first study to demonstrate that anammox bacteria displayed the particular distribution in freshwater sediments, which implied a strong response to the anthropogenic eutrophication. © 2018 The Society for Applied Microbiology.

Turning the tide: effects of river inflow and tidal amplitude on sandy estuaries in laboratory landscape experiments

Science.gov (United States)

Kleinhans, Maarten; Braat, Lisanne; Leuven, Jasper; Baar, Anne; van der Vegt, Maarten; van Maarseveen, Marcel; Markies, Henk; Roosendaal, Chris; van Eijk, Arjan

2016-04-01

Many estuaries formed over the Holocene through a combination of fluvial and coastal influxes, but how estuary planform shape and size depend on tides, wave climate and river influxes remains unclear. Here we use a novel tidal flume setup of 20 m length by 3 m width, the Metronome (http://www.uu.nl/metronome), to create estuaries and explore a parameter space for the simple initial condition of a straight river in sandy substrate. Tidal currents capable of transporting sediment in both the ebb and flood phase because they are caused by periodic tilting of the flume rather than the classic method of water level fluctuation. Particle imaging velocimetry and a 1D shallow flow model demonstrate that this principle leads to similar sediment mobility as in nature. Ten landscape experiments recorded by timelapse overhead imaging and AGIsoft DEMs of the final bed elevation show that absence of river inflow leads to short tidal basins whereas even a minor discharge leads to long convergent estuaries. Estuary width and length as well as morphological time scale over thousands of tidal cycles strongly depend on tidal current amplitude. Paddle-generated waves subdue the ebb delta causing stronger tidal currents in the basin. Bar length-width ratios in estuaries are slightly larger to those in braided rivers in experiments and nature. Mutually evasive ebb- and flood-dominated channels are ubiquitous and appear to be formed by an instability mechanism with growing bar and bifurcation asymmetry. Future experiments will include mud flats and live vegetation.

Carbon, metals and grain size correlate with bacterial community composition in sediments of a high arsenic aquifer

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Teresa eLegg

2012-03-01

Full Text Available Bacterial communities can exert significant influence on the biogeochemical cycling of arsenic (As. This has globally important implications since As toxicity in drinking water affects the health of millions of people worldwide, including in the Ganges-Brahmaputra Delta region of Bangladesh where geogenic groundwater arsenic concentrations can be more than 10 times the World Health Organization’s limit. Thus, the goal of this research was to investigate patterns in bacterial community composition across environmental gradients in an aquifer with elevated groundwater As concentrations in Araihazar, Bangladesh. We characterized the bacterial community by pyrosequencing 16S rRNA genes from aquifer sediment samples collected at three locations along a groundwater flowpath, at a range of depths between 1.5 and 15 m. We identified significant shifts in bacterial community composition along the groundwater flowpath in the aquifer. In addition, we found that bacterial community structure was significantly related to sediment grain size, and sediment carbon (C, manganese (Mn, and iron (Fe concentrations. Deltaproteobacteria and Chloroflexi were more abundant in silty sediments with higher concentrations of C, Fe, and Mn. By contrast, Alphaproteobacteria and Betaproteobacteria were more abundant in sediments with higher concentrations of sand and Si, and lower concentrations of C and metals. Based on the phylogenetic affiliations of these taxa, these results may indicate a shift to more Fe-, Mn-, and humic substance- reducers in the high C and metal sediments. It is well-documented that C, Mn and Fe may influence the mobility of groundwater arsenic, and it is intriguing that these constituents may also structure the bacterial community.

Application of Distributed Temperature Sensing for coupled mapping of sedimentation processes and spatio-temporal variability of groundwater discharge in soft-bedded streams

DEFF Research Database (Denmark)

Sebok, Eva; Duque, C; Engesgaard, Peter

2015-01-01

, maximum and mean streambed temperatures as well as the daily amplitude and standard deviation of temperatures. The identified potential high-discharge areas were mostly located near the channel banks, also showing temporal variability because of the scouring and redistribution of streambed sediments......The delineation of groundwater discharge areas based on Distributed Temperature Sensing (DTS) data of the streambed can be difficult in soft-bedded streams where sedimentation and scouring processes constantly change the position of the fibre optic cable relative to the streambed. Deposition...... variability in streambed temperatures between October 2011 and January 2012. Detailed monthly streambed elevation surveys were carried out to monitor the position of the fibre optic cable relative to the streambed and to quantify the effect of sedimentation processes on streambed temperatures. Based...

Which future for the tidal sector in France? Towards a new model of territorial development

International Nuclear Information System (INIS)

Aelbrecht, Denis; Deroo, Luc; Le Visage, Christophe; Rabain, Antoine

2017-01-01

This document proposes a brief overview of works by a French national work-group of the SHF (French Hydro-technical Society) on the new tidal sector. It indicates recent and current development in the renewable marine energy sector: offshore wind farms along the French coasts, floating wind energy demonstrators, several tidal stream demonstrators, and other projects. British projects are also evoked. Then various aspects which could be success factors, are briefly discussed: the tidal potential, project configuration types (dams in estuary, coastal lagoons, offshore lagoons), interactions with the environment (sea and coastal ecosystems, sediments), opportunities of technological innovation (belt of the tidal basin, machine technology, exploitation mode), the concept of tidal garden, economic performance and viability (orientations for cost reduction and income increase). The issue of feasibility with respect with the NIMBY syndrome is finally addressed, and orientations and principles are briefly defined to evolve towards a YINBY (Yes in my back yard) syndrome

An Introduction to the San Francisco Estuary Tidal Wetlands Restoration Series

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Larry R. Brown

2003-10-01

Full Text Available Restoration of tidal wetlands may provide an important tool for improving ecological health and water management for beneficial uses of the San Francisco Estuary (hereafter “Estuary”. Given the large losses of tidal wetlands from San Francisco Bay and the Sacramento-San Joaquin Delta in the last 150 years, it seems logical to assume that restoring tidal wetlands will have benefits for a variety of aquatic and terrestrial native species that have declined during the same time period. However, many other changes have also occurred in the Estuary concurrent with the declines of native species. Other factors that might be important in species declines include the effects of construction of upstream dams, large and small water diversions within the Sacramento-San Joaquin Delta, agricultural pesticides, trace elements from industrial and agricultural activities, and invasions of alien species. Discussions among researchers, managers, and stakeholders have identified a number of uncertainties regarding the potential benefits of tidal wetland restoration. The articles of the Tidal Wetlands Restoration Series address four major issues of concern. Stated as questions, these are: 1. Will tidal wetland restoration enhance populations of native fishes? 2. Will wetland restoration increase rates of methylation of mercury? 3. Will primary production and other ecological processes in restored tidal wetlands result in net export of organic carbon to adjacent habitats, resulting in enhancement of the food web? Will the carbon produced contribute to the formation of disinfection byproducts when disinfected for use as drinking water? 4. Will restored tidal wetlands provide long-term ecosystem benefits that can be sustained in response to ongoing physical processes, including sedimentation and hydrodynamics? Reducing the uncertainty surrounding these issues is of critical importance because tidal wetland restoration is assumed to be a critical tool for

Lead pollution in a large, prairie-pothole lake (Rush Lake, WI, USA): Effects on abundance and community structure of indigenous sediment bacteria

International Nuclear Information System (INIS)

Grandlic, Christopher J.; Geib, Ian; Pilon, Renee; Sandrin, Todd R.

2006-01-01

Rush Lake (WI, USA), the largest prairie-pothole lake east of the Mississippi River, has been contaminated with lead pollution as a result of over 140 years of waterfowl hunting. We examined: (1) the extent of lead pollution in Rush Lake sediments and (2) whether lead pollution in Rush Lake is affecting the abundance and community structure of indigenous sediment bacteria. Sediment lead concentrations did not exceed 59 mg Pb kg -1 dry sediment. No relationship was observed between sediment lead concentration and the abundance of aerobic (P = 0.498) or anaerobic (P = 0.416) heterotrophic bacteria. Similarly, lead did not appear to affect bacterial community structure when considering both culturable and nonculturable community members. In contrast, the culturable fraction of sediment bacteria in samples containing 59 mg Pb kg -1 exhibited a unique community structure. While factors other than lead content likely play roles in determining bacterial community structure in the sediments of Rush Lake, these data suggest that the culturable fraction of sediment bacterial communities is affected by elevated lead levels. - Low levels of lead pollution in Rush Lake are not impinging upon the abundance of indigenous sediment bacteria, but may be affecting the community structure of the culturable fraction of these bacteria

Increased sediment load during a large-scale dam removal changes nearshore subtidal communities.

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Stephen P Rubin

Full Text Available The coastal marine ecosystem near the Elwha River was altered by a massive sediment influx-over 10 million tonnes-during the staged three-year removal of two hydropower dams. We used time series of bathymetry, substrate grain size, remotely sensed turbidity, scuba dive surveys, and towed video observations collected before and during dam removal to assess responses of the nearshore subtidal community (3 m to 17 m depth. Biological changes were primarily driven by sediment deposition and elevated suspended sediment concentrations. Macroalgae, predominantly kelp and foliose red algae, were abundant before dam removal with combined cover levels greater than 50%. Where persistent sediment deposits formed, macroalgae decreased greatly or were eliminated. In areas lacking deposition, macroalgae cover decreased inversely to suspended sediment concentration, suggesting impacts from light reduction or scour. Densities of most invertebrate and fish taxa decreased in areas with persistent sediment deposition; however, bivalve densities increased where mud deposited over sand, and flatfish and Pacific sand lance densities increased where sand deposited over gravel. In areas without sediment deposition, most invertebrate and fish taxa were unaffected by increased suspended sediment or the loss of algae cover associated with it; however, densities of tubeworms and flatfish, and primary cover of sessile invertebrates increased suggesting benefits of increased particulate matter or relaxed competition with macroalgae for space. As dam removal neared completion, we saw evidence of macroalgal recovery that likely owed to water column clearing, indicating that long-term recovery from dam removal effects may be starting. Our results are relevant to future dam removal projects in coastal areas and more generally to understanding effects of increased sedimentation on nearshore subtidal benthic communities.

Increased sediment load during a large-scale dam removal changes nearshore subtidal communities

Science.gov (United States)

Rubin, Stephen P.; Miller, Ian M.; Foley, Melissa M.; Berry, Helen D.; Duda, Jeffrey J.; Hudson, Benjamin; Elder, Nancy E.; Beirne, Matthew M.; Warrick, Jonathan; McHenry, Michael L.; Stevens, Andrew; Eidam, Emily; Ogston, Andrea; Gelfenbaum, Guy R.; Pedersen, Rob

2017-01-01

The coastal marine ecosystem near the Elwha River was altered by a massive sediment influx—over 10 million tonnes—during the staged three-year removal of two hydropower dams. We used time series of bathymetry, substrate grain size, remotely sensed turbidity, scuba dive surveys, and towed video observations collected before and during dam removal to assess responses of the nearshore subtidal community (3 m to 17 m depth). Biological changes were primarily driven by sediment deposition and elevated suspended sediment concentrations. Macroalgae, predominantly kelp and foliose red algae, were abundant before dam removal with combined cover levels greater than 50%. Where persistent sediment deposits formed, macroalgae decreased greatly or were eliminated. In areas lacking deposition, macroalgae cover decreased inversely to suspended sediment concentration, suggesting impacts from light reduction or scour. Densities of most invertebrate and fish taxa decreased in areas with persistent sediment deposition; however, bivalve densities increased where mud deposited over sand, and flatfish and Pacific sand lance densities increased where sand deposited over gravel. In areas without sediment deposition, most invertebrate and fish taxa were unaffected by increased suspended sediment or the loss of algae cover associated with it; however, densities of tubeworms and flatfish, and primary cover of sessile invertebrates increased suggesting benefits of increased particulate matter or relaxed competition with macroalgae for space. As dam removal neared completion, we saw evidence of macroalgal recovery that likely owed to water column clearing, indicating that long-term recovery from dam removal effects may be starting. Our results are relevant to future dam removal projects in coastal areas and more generally to understanding effects of increased sedimentation on nearshore subtidal benthic communities.

Prompt emission from tidal disruptions of white dwarfs by intermediate mass black holes

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Laguna P.

2012-12-01

Full Text Available We present a qualitative picture of prompt emission from tidal disruptions of white dwarfs (WD by intermediate mass black holes (IMBH. The smaller size of an IMBH compared to a supermassive black hole and a smaller tidal radius of a WD disruption lead to a very fast event with high peak luminosity. Magnetic field is generated in situ following the tidal disruption, which leads to effective accretion. Since large-scale magnetic field is also produced, geometrically thick super-Eddington inflow leads to a relativistic jet. The dense jet possesses a photosphere, which emits quasi-thermal radiation in soft X-rays. The source can be classified as a long low-luminosity gamma-ray burst (ll-GRB. Tidal compression of a WD causes nuclear ignition, which is observable as an accompanying supernova. We suggest that GRB060218 and SN2006aj is such a pair of ll-GRB and supernova. We argue that in a flux-limited sample the disruptions of WDs by IMBHs are more frequent then the disruptions of other stars by IMBHs.

A Dissociation between Recognition and Hedonic Value in Caloric and Non-caloric Carbonated Soft Drinks

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Franco eDelogu

2016-01-01

Full Text Available Consumption of sugar-sweetened beverages (SSBs is considered to be a contributor to diabetes and the epidemic of obesity in many countries. The popularity of non-caloric carbonated soft drinks as an alternative to SSBs may be a factor in reducing the health risks associated with SSBs consumption. This study focuses on the perceptual discrimination of SSBs from artificially sweetened beverages (ASBs. 55 college students rated 14 commercially available carbonated soft drinks in terms of sweetness and likeability. They were also asked to recognize if the drinks contained sugar or a non-caloric artificial sweetener. Overall, participants showed poor accuracy in discriminating drinks’ sweeteners, with significantly lower accuracy for SSBs than ASBs. Interestingly, we found a dissociation between sweetener recognition and drink pleasantness. In fact, in spite of a chance-level discrimination accuracy of SSBs, their taste was systematically preferred to the taste of non-caloric beverages. Our findings support the idea that hedonic value of carbonated soft drinks is dissociable from its identification and that the activation of the pleasure system seems not to require explicit recognition of the sweetener contained in the soft drink. We hypothesize that preference for carbonated soft drinks containing sugar over non-caloric alternatives might be modulated by metabolic factors that are independent from conscious and rational consumers’ choices.

Non-neoplastic conditions presenting as soft-tissue tumours

International Nuclear Information System (INIS)

Crundwell, N.; O'Donnell, P.; Saifuddin, A.

2007-01-01

Review of referrals to our unit over the last 7 years showed that of approximately 750 cases referred as soft-tissue tumours, 132 were subsequently diagnosed as non-neoplastic lesions. The imaging characteristics of these lesions are presented to differentiate them from neoplasms. The most common diagnoses were myositis ossificans, ganglion cyst, abscess/infection, bursitis and synovitis. The imaging features of other rarer conditions will also be discussed

Non-neoplastic conditions presenting as soft-tissue tumours

Energy Technology Data Exchange (ETDEWEB)

Crundwell, N. [Royal National Orthopaedic Hospital, Stanmore, Middlesex (United Kingdom); O' Donnell, P. [Royal National Orthopaedic Hospital, Stanmore, Middlesex (United Kingdom); Saifuddin, A. [Royal National Orthopaedic Hospital, Stanmore, Middlesex (United Kingdom)]. E-mail: asif.saifuddin@rnoh.nhs.uk

2007-01-15

Review of referrals to our unit over the last 7 years showed that of approximately 750 cases referred as soft-tissue tumours, 132 were subsequently diagnosed as non-neoplastic lesions. The imaging characteristics of these lesions are presented to differentiate them from neoplasms. The most common diagnoses were myositis ossificans, ganglion cyst, abscess/infection, bursitis and synovitis. The imaging features of other rarer conditions will also be discussed.

Three-dimensional modelling for assessment of far-field impact of tidal stream turbine: A case study at the Anglesey Coast, Wales, UK

Science.gov (United States)

Li, Xiaorong; Li, Ming; Wolf, Judith

2017-04-01

As a response to worldwide climate change, clean non-carbon renewable energy resources have been gaining significant attention. Among a range of renewable alternatives, tidal stream energy is considered very promising; due to its consistent predictability and availability. To investigate impacts of tidal stream devices on their surroundings, prototype experiments involving small scale laboratory studies have been implemented. Computational Flow Dynamics (CFD) modelling is also commonly applied to study turbine behaviours. However, these studies focus on impacts of the turbine in the near-field scale. As a result, in order to study and predict the far-field impacts caused by the operation of turbines, large scale 2D and 3D numerical oceanography models have been used, with routines added to reflect the impacts of turbines. In comparison to 2D models, 3D models are advantageous in providing complete prediction of vertical flow structures and hence mixing in the wake of a turbine. This research aims to deliver a thorough 3D tidal stream turbine simulation system, by considering major coastal processes, i.e. current, waves and sediment transport, based on a 3D wave-current-sediment fully coupled numerical oceanography model — the Unstructured Grid Finite Volume Community Ocean Model (FVCOM). The energy extraction of turbines is simulated by adding a body force to the momentum equations. Across the water depth, the coefficient related to the additional body force is given different values according to the turbine configuration and operation to reflect the vertical variation of the turbine's impacts on the passing flow. Three turbulence perturbation terms are added to the turbulence closure to simulate the turbine-induced turbulence generation, dissipation and interference for the turbulence length-scale. Impacts of turbine operation on surface waves are also considered by modification of wave energy flux across the device. A thorough validation study is carried out in

Evidence of tidal processes from the lower part of the Witwatersrand Supergroup, South Africa

Science.gov (United States)

Eriksson, Kenneth A.; Turner, Brian R.; Vos, Richard G.

1981-08-01

A 1600-m succession of quartz arenites and associated shaley deposits comprising the Hospital Hill Subgroup at the base of the Witwatersrand Supergroup is considered to have been deposited largely under the influence of tidal processes. Facies analysis indicates that deposition occurred in the following environments: (1) marine shalf; (2) shallow subtidal to intertidal; (3) intertidal flat; and (4) tidal inlet. The presence of strong tidal currents implies that the Witwatersrand Basin was open to an ocean basin, at least during the early stages of its evolution. Palaeocurrent trends and isopach data suggest that this probably lay to the southwest, an area now occupied by the high grade Natal—Namaqua metamorphic belt. The contrast between the supermature quartz arenites of the Hospital Hill Subgroup and the overlying gold-bearing immature subgreywackes, feldspathic quartzites and conglomerates of fluvial origin is believed to be a function of tidal reworking of sediments.

Characterization of Oily and Non-Oily Natural Sediments in Palm Oil Mill Effluent

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Reem A. Alrawi

2013-01-01

Full Text Available Palm oil is one of the many vegetable oils widely consumed around the world. The production of palm oil requires voluminous amount of water with the concurrent generation of large amount of wastewater known as palm oil mill effluent (POME. POME is a mixture of water, oil, and natural sediments (solid particles and fibres.There is a dearth of information on the physical properties of these POME sediments. This study intends to distinguish the physical properties of oily and non-oily POME sediments which include sediment size, particle size distribution (PSD, sediment shape, sediment surface morphology, and sediment density. These characterizations are important for future researches because these properties have significant effects on the settling process that occurs either under natural gravity or by coagulations. It was found that the oily and non-oily POME sediments have different sizes with nonspherical irregular shapes, and because of that, the aspect ratio (AR and circularity shape factors were adopted to describe the shapes of these sediments. The results also indicate that the density of oily POME sediment decreases as the sediment size increases.

North American coastal carbon stocks and exchanges among the coupled ecosystems of tidal wetlands and estuaries

Science.gov (United States)

Windham-Myers, L.; Cai, W. J.

2017-12-01

The development of the 2nd State of the Carbon Cycle Report (SOCCR-2) has recognized a significant role of aquatic ecosystems, including coastal zones, in reconciling some of the gaps associated with the North American carbon (C) budget. Along with a large community of coauthors, we report major C stocks and fluxes for tidal wetlands and estuaries of Canada, Mexico and the United States. We find divergent patterns between these coupled ecosystems, with tidal wetlands largely serving as CO2 sinks (net autotrophic), and open-water estuaries largely serving as CO2 sources (net heterotrophic). We summarized measurements across 4 continental regions - East Coast, Gulf of Mexico, West Coast, and High Latitudes - to assess spatial variability and datagaps in our understanding of coastal C cycling. Subtracting estuarine outgassing of 10 ± 10 Tg C yr-1 from the tidal wetland uptake of 23 ± 10 Tg C yr-1 leaves a net uptake of the combined system of 13 ± 14 Tg C yr-1. High uncertainty for net atmospheric C exchange in this combined coastal system is further complicated by spatially and temporally dynamic boundaries, as well as terrestrial C sources. Tidal wetlands are among the most productive ecosystems on earth and are capable of continuously accumulating organic C in their sediments as a result of environmental conditions that inhibit organic matter decomposition. Estuaries have more interannual variability in C dynamics than those of tidal wetlands, reflecting the estuarine balance of exchanges with terrestrial watersheds, tidal wetlands, and the continental shelf. Whereas tidal, subtidal and estuarine maps are of limited accuracy at larger scales, North America likely represents less than 1/10 of global distributions of coastal wetland habitats. Coupled land-ocean C flux models are increasingly robust but lacking much of the data needed for parameterization and validation. Accurate boundary maps and synoptic monitoring data on air-water CO2 exchange may be developed

Organic matter accumulation and degradation in subsurface coastal sediments: a model-based comparison of rapid sedimentation and aquifer transport

Directory of Open Access Journals (Sweden)

J. M. Holstein

2010-11-01

Full Text Available The redox succession in shallow marine sediments generally exhibits a predictable pattern. Pore water profiles from a back barrier tidal flat in the German Wadden Sea depart from the expected redox zoning. Instead, a sulfate minimum zone associated with a sulfate-methane-sulfate double interface and a distinct ammonium peak at 1.5 m below sea floor (mbsf is displayed. Such evidence for significant degradation of organic matter (OM in subsurface layers is challenging our understanding of tidal flat biogeochemistry as little is known about processes that relocate reactive OM into layers far distant from the sediment-water interface. The objectives of our model study were to identify possible mechanisms for the rapid transport of organic matter to subsurface layers that cause the reversed redox succession and to constrain several important biogeochemical control parameters. We compared two scenarios for OM transfer: rapid sedimentation and burial of OM as well as lateral advection of suspended POM. Using a diagenetic model, uncertain process parameters, in particular those connected to OM degradation and (vertical or lateral transport, are systematically calibrated using field data.

We found that both scenarios, advection and sedimentation, had solutions consistent with the observed pore water profiles. For this specific site, however, advective transport of particulate material had to be rejected since the reconstructed boundary conditions were rather improbable. In the alternative deposition set-up, model simulations suggested the deposition of the source OM about 60 yrs before cores were taken. A mean sedimentation rate of approximately 2 cm yr⁻¹ indicates substantial changes in near coast tidal flat morphology, since sea level rise is at a much lower pace. High sedimentation rates most probably reflect the progradation of flats within the study area. These or similar morphodynamic features also occur in other coastal areas

Tidal Venuses: triggering a climate catastrophe via tidal heating.

Science.gov (United States)

Barnes, Rory; Mullins, Kristina; Goldblatt, Colin; Meadows, Victoria S; Kasting, James F; Heller, René

2013-03-01

Traditionally, stellar radiation has been the only heat source considered capable of determining global climate on long timescales. Here, we show that terrestrial exoplanets orbiting low-mass stars may be tidally heated at high-enough levels to induce a runaway greenhouse for a long-enough duration for all the hydrogen to escape. Without hydrogen, the planet no longer has water and cannot support life. We call these planets "Tidal Venuses" and the phenomenon a "tidal greenhouse." Tidal effects also circularize the orbit, which decreases tidal heating. Hence, some planets may form with large eccentricity, with its accompanying large tidal heating, and lose their water, but eventually settle into nearly circular orbits (i.e., with negligible tidal heating) in the habitable zone (HZ). However, these planets are not habitable, as past tidal heating desiccated them, and hence should not be ranked highly for detailed follow-up observations aimed at detecting biosignatures. We simulated the evolution of hypothetical planetary systems in a quasi-continuous parameter distribution and found that we could constrain the history of the system by statistical arguments. Planets orbiting stars with massesplanet orbiting a 0.3 MSun star at 0.12 AU. We found that it probably did not lose its water via tidal heating, as orbital stability is unlikely for the high eccentricities required for the tidal greenhouse. As the inner edge of the HZ is defined by the onset of a runaway or moist greenhouse powered by radiation, our results represent a fundamental revision to the HZ for noncircular orbits. In the appendices we review (a) the moist and runaway greenhouses, (b) hydrogen escape, (c) stellar mass-radius and mass-luminosity relations, (d) terrestrial planet mass-radius relations, and (e) linear tidal theories.

Conceptual Site Model for Newark Bay—Hydrodynamics and Sediment Transport

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Parmeshwar L. Shrestha

2014-02-01

Full Text Available A conceptual site model (CSM has been developed for the Newark Bay Study Area (NBSA as part of the Remedial Investigation/Feasibility Study (RI/FS for this New Jersey site. The CSM is an evolving document that describes the influence of physical, chemical and biological processes on contaminant fate and transport. The CSM is initiated at the start of a project, updated during site activities, and used to inform sampling and remediation planning. This paper describes the hydrodynamic and sediment transport components of the CSM for the NBSA. Hydrodynamic processes are influenced by freshwater inflows, astronomical forcing through two tidal straits, meteorological conditions, and anthropogenic activities such as navigational dredging. Sediment dynamics are driven by hydrodynamics, waves, sediment loading from freshwater sources and the tidal straits, sediment size gradation, sediment bed properties, and particle-to-particle interactions. Cohesive sediment transport is governed by advection, dispersion, aggregation, settling, consolidation, and erosion. Noncohesive sediment transport is governed by advection, dispersion, settling, armoring, and transport in suspension and along the bed. The CSM will inform the development and application of a numerical model that accounts for all key variables to adequately describe the NBSA’s historical, current, and future physical conditions.

Sediment characteristics at intertidal regions across Yarada beach, East coast of India

Digital Repository Service at National Institute of Oceanography (India)

Yadhunath, E.M.; Raju, N.S.N.; Ganesan, P.; Gowthaman, R.; JayaKumar, S.

Sediment samples were collected once a month at five different inter-tidal zones across Yarada beach during May-2009 to May-2010 These sediments are characterized by bimodal and unimodal behaviour and most of them are sorted as moderately as well...

Significance of Soft Zone Sediments at the SRS

Energy Technology Data Exchange (ETDEWEB)

Aadland, R.K.

2000-02-03

The purpose of this report is to provide information on the origin, extent and stability of ''soft zones'' in the carbonate bearing strata at the Savannah River Site (SRS). As part of this study, a comprehensive historical compendium of how soft zones have been addressed during the past 47 years at SRS is reviewed.

Short-term variability on mesozooplankton community in a shallow mixed estuary (Bahía Blanca, Argentina): Influence of tidal cycles and local winds

Science.gov (United States)

Menéndez, María C.; Piccolo, María C.; Hoffmeyer, Mónica S.

2012-10-01

The short-term dynamics of zooplankton in coastal ecosystems are strongly influenced by physical processes such as tides, riverine runoff and winds. In this study, we investigated the short-term changes of the representative taxa within mesozooplankton in relation to the semidiurnal tidal cycles. Also, we evaluated the influence of local winds on this short-term variability. Sampling was carried out bimonthly from December 2004 to April 2006 in a fixed point located in the inner zone of the Bahía Blanca Estuary, Argentina. Mesozooplankton samples were taken by pumps during 14-h tidal cycles at 3-h intervals, from surface and bottom. Vertical profiles of temperature and salinity as well as water samples to determine suspended particulate matter were acquired at each sampling date. All data concerning winds were obtained from a meteorological station and water level was recorded with a tide gauge. Holoplankton dominated numerically on meroplankton and adventitious fraction. Concerning holoplanktonic abundance, the highest values were attained by the calanoid copepods Acartia tonsa and Eurytemora americana. Meroplankton occurred mainly as barnacle larvae while benthic harpacticoids and Corophium sp. dominated the adventitious component. Semidiurnal tide was the main influence on the A. tonsa variability. However, noticeable differences in the abundance pattern as function of wind intensity were detected. Meroplankton abundance did not show a clear variation along the tidal cycle. Distributional pattern of harpacticoids seemed to be mainly modulated by velocity asymmetries in the tidal currents, in the same way as suspended particulate matter. However, the Corophium sp. distribution indicated probable behavioural responses associated with tides. The obtained results show how variable the mesozooplankton community structure can be over short-term time scales in mesotidal temperate estuaries. This variability should be taken into account for any zooplankton monitoring

Community Composition and Abundance of Anammox Bacteria in Cattail Rhizosphere Sediments at Three Phenological Stages.

Science.gov (United States)

Zhou, Xiaohong; Zhang, Jinping; Wen, Chunzi

2017-11-01

The distribution of anammox bacteria in rhizosphere sediments of cattail (Typha orientalis) at different phenological stages was investigated. Results showed that the number of 16S rRNA gene copies of the anammox bacteria was considerably higher in the rhizosphere sediment than in the nonrhizosphere sediment and control sediment. The abundances of the anammox bacteria exhibited striking temporal variations in the three different cattail phenological stages. In addition, the Chao1 and Shannon H indexes of the anammox bacteria in cattail rhizosphere sediments had evident spatial and temporal variations at different phenological stages. Four anammox genera (Brocadia, Kuenenia, Jettenia, and a new cluster) were detected and had proportions of 34.18, 45.57, 0.63, and 19.62%, respectively. The CCA analysis results indicated that Cu, TN, Pb, and Zn were pivotal factors that affect anammox bacteria composition. The PCoA analysis results indicated that the community structure at the rhizosphere and nonrhizosphere sediments collected on July was relatively specific and was different from sediments collected on other months, suggesting that cattail can influence the community structures of the anammox bacteria at the maturity stage.

Marine Microbial Gene Abundance and Community Composition in Response to Ocean Acidification and Elevated Temperature in Two Contrasting Coastal Marine Sediments

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Ashleigh R. Currie

2017-08-01

Full Text Available Marine ecosystems are exposed to a range of human-induced climate stressors, in particular changing carbonate chemistry and elevated sea surface temperatures as a consequence of climate change. More research effort is needed to reduce uncertainties about the effects of global-scale warming and acidification for benthic microbial communities, which drive sedimentary biogeochemical cycles. In this research, mesocosm experiments were set up using muddy and sandy coastal sediments to investigate the independent and interactive effects of elevated carbon dioxide concentrations (750 ppm CO2 and elevated temperature (ambient +4°C on the abundance of taxonomic and functional microbial genes. Specific quantitative PCR primers were used to target archaeal, bacterial, and cyanobacterial/chloroplast 16S rRNA in both sediment types. Nitrogen cycling genes archaeal and bacterial ammonia monooxygenase (amoA and bacterial nitrite reductase (nirS were specifically targeted to identify changes in microbial gene abundance and potential impacts on nitrogen cycling. In muddy sediment, microbial gene abundance, including amoA and nirS genes, increased under elevated temperature and reduced under elevated CO2 after 28 days, accompanied by shifts in community composition. In contrast, the combined stressor treatment showed a non-additive effect with lower microbial gene abundance throughout the experiment. The response of microbial communities in the sandy sediment was less pronounced, with the most noticeable response seen in the archaeal gene abundances in response to environmental stressors over time. 16S rRNA genes (amoA and nirS were lower in abundance in the combined stressor treatments in sandy sediments. Our results indicated that marine benthic microorganisms, especially in muddy sediments, are susceptible to changes in ocean carbonate chemistry and seawater temperature, which ultimately may have an impact upon key benthic biogeochemical cycles.

Emergent macrophytes modify the abundance and community composition of ammonia oxidizers in their rhizosphere sediments.

Science.gov (United States)

Zhao, Dayong; He, Xiaowei; Huang, Rui; Yan, Wenming; Yu, Zhongbo

2017-07-01

Ammonia oxidation is a crucial process in global nitrogen cycling, which is catalyzed by the ammonia oxidizers. Emergent plants play important roles in the freshwater ecosystem. Therefore, it is meaningful to investigate the effects of emergent macrophytes on the abundance and community composition of ammonia oxidizers. In the present study, two commonly found emergent macrophytes (Zizania caduciflora and Phragmitas communis) were obtained from freshwater lakes and the abundance and community composition of the ammonia-oxidizing prokaryotes in the rhizosphere sediments of these emergent macrophytes were investigated. The abundance of the bacterial amoA gene was higher in the rhizosphere sediments of the emergent macrophytes than those of bulk sediments. Significant positive correlation was found between the potential nitrification rates (PNRs) and the abundance of bacterial amoA gene, suggesting that ammonia-oxidizing bacteria (AOB) might play an important role in the nitrification process of the rhizosphere sediments of emergent macrophytes. The Nitrosotalea cluster is the dominant ammonia-oxidizing archaea (AOA) group in all the sediment samples. Analysis of AOB group showed that the N. europaeal cluster dominated the rhizosphere sediments of Z. caduciflora and the bulk sediments, whereas the Nitrosospira cluster was the dominant AOB group in the rhizosphere sediments of P. communis. © 2017 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Macrobenthic community in the Douro estuary: relations with trace metals and natural sediment characteristics

International Nuclear Information System (INIS)

Mucha, A.P.; Vasconcelos, M.T.S.D.; Bordalo, A.A.

2003-01-01

This study used a novel approach to detect a clear signature of metal contamination and biological impacts in an estuary. - The relationship between macrobenthic community structure and natural characteristics of sediment and trace metal contamination were studied in the lower Douro estuary (Portugal, NW, Iberian Peninsula), using an innovative threefold approach (SQG, Sediment Quality Guidelines), metal normalization to Fe, and macrobenthic community structure. This study allowed detection of a clear signature of anthropogenic contamination, in terms of Zn, Cu, Pb, and Cr in the north bank of the estuary, which experiences high urban pressure. Using the SQG approach, metal concentrations above ERM (effects range--median) were observed only at one sampling station, but several stations had levels above ERL (effects range-low). The macrobenthic community had a low diversity, with only 19 species found in the entire estuarine area, dominated by opportunistic species. The granulometric distribution of the sediments (estimated from the combination of organic matter, Fe and Al) seemed to be the major structuring factor for the communities, establishing the natural macrobenthic distribution pattern. The metals (Zn, Cu, Pb, and Cr) seemed to act as a disturbing factor over the natural distribution, with deleterious consequences for the macrobenthic communities

Atypical Thermonuclear Supernovae from Tidally Crushed White Dwarfs

International Nuclear Information System (INIS)

Rosswog, S.; Ramirez-Ruiz, E.; Hix, William Raphael

2008-01-01

Suggestive evidence has accumulated that intermediate mass black holes (IMBHs) exist in some globular clusters. Some stars will inevitably wander sufficiently close to the hole to suffer a tidal disruption. IMBHs can disrupt not only solar-type stars but also compact white dwarf stars. We investigate the fate of white dwarfs that approach the hole close enough to be disrupted and compressed to such an extent that explosive nuclear burning is triggered. Based on a precise modeling of the gas dynamics together with the nuclear reactions, it is argued that thermonuclear ignition is a natural outcome for white dwarfs of all masses passing well within the tidal radius. A good fraction of the star is accreted, yielding high luminosities that persist for up to a year. A peculiar, underluminous thermonuclear explosion accompanied by a soft X-ray transient signal would, if detected, be a compelling testimony for the presence of an IMBH

IMPROVING THE HARD SKILLS AND SOFT SKILLS OF MADRASAH TEACHERS FOR DEALING ASEAN ECONOMIC COMMUNITY (AEC

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Laely Mahmudah

2016-11-01

Full Text Available ASEAN Economic Community (AEC has been started rolling. Market competition, industry, and skilled workers, especially in the field of education are becoming increasingly stringent. Madrasah teachers as the front liners in the education process should improve the quality of human resources. Hard skills and soft skills of madrasah teachers must be improved to deal with the Asean Economic Community (AEC. Hard skills are academic skills that include pedagogic competence and professional competence. How to improve the hard skills is to meet the pedagogic competence (ability to manage learning students and professional competence (the ability to master the learning material is broad and deep. Soft skills is the ability to organize themselves (intrapersonal skills, such as creativity, motivation, and self-contained and the ability to interact with others (interpersonal skills, such as communication, team building and adaptation to maximize performance. Soft skills include personal competence and social competence. Madrasah teachers should be able to change the mindset of a passenger became good driver. Professional madrasah teachers are teachers who have the balanced hard skills and soft skills, which can compete healthily in AEC era.

Impacts of the Deepwater Horizon oil spill on deep-sea coral-associated sediment communities

Science.gov (United States)

Demopoulos, Amanda W.J.; Bourque, Jill R.; Cordes, Erik E.; Stamler, Katherine

2016-01-01

Cold-water corals support distinct populations of infauna within surrounding sediments that provide vital ecosystem functions and services in the deep sea. Yet due to their sedentary existence, infauna are vulnerable to perturbation and contaminant exposure because they are unable to escape disturbance events. While multiple deep-sea coral habitats were injured by the 2010 Deepwater Horizon (DWH) oil spill, the extent of adverse effects on coral-associated sediment communities is unknown. In 2011, sediments were collected adjacent to several coral habitats located 6 to 183 km from the wellhead in order to quantify the extent of impact of the DWH spill on infaunal communities. Higher variance in macrofaunal abundance and diversity, and different community structure (higher multivariate dispersion) were associated with elevated hydrocarbon concentrations and contaminants at sites closest to the wellhead (MC294, MC297, and MC344), consistent with impacts from the spill. In contrast, variance in meiofaunal diversity was not significantly related to distance from the wellhead and no other community metric (e.g. density or multivariate dispersion) was correlated with contaminants or hydrocarbon concentrations. Concentrations of polycyclic aromatic hydrocarbons (PAH) provided the best statistical explanation for observed macrofaunal community structure, while depth and presence of fine-grained mud best explained meiofaunal community patterns. Impacts associated with contaminants from the DWH spill resulted in a patchwork pattern of infaunal community composition, diversity, and abundance, highlighting the role of variability as an indicator of disturbance. These data represent a useful baseline for tracking post-spill recovery of these deep-sea communities.

Air-coupled acoustic radiation force for non-contact generation of broadband mechanical waves in soft media

Energy Technology Data Exchange (ETDEWEB)

Ambroziński, Łukasz [Department of Bioengineering, University of Washington, Seattle, Washington 98195 (United States); AGH University of Science and Technology, Krakow 30059 (Poland); Pelivanov, Ivan, E-mail: ivanp3@uw.edu [Department of Bioengineering, University of Washington, Seattle, Washington 98195 (United States); Faculty of Physics, Moscow State University, Moscow 119991 (Russian Federation); Song, Shaozhen; Yoon, Soon Joon; Gao, Liang; O' Donnell, Matthew [Department of Bioengineering, University of Washington, Seattle, Washington 98195 (United States); Li, David [Department of Bioengineering, University of Washington, Seattle, Washington 98195 (United States); Department of Chemical Engineering, University of Washington Seattle, Washington 98195 (United States); Shen, Tueng T.; Wang, Ruikang K. [Department of Bioengineering, University of Washington, Seattle, Washington 98195 (United States); Department of Ophthalmology, University of Washington, Seattle, Washington 98104 (United States)

2016-07-25

A non-contact method for efficient, non-invasive excitation of mechanical waves in soft media is proposed, in which we focus an ultrasound (US) signal through air onto the surface of a medium under study. The US wave reflected from the air/medium interface provides radiation force to the medium surface that launches a transient mechanical wave in the transverse (lateral) direction. The type of mechanical wave is determined by boundary conditions. To prove this concept, a home-made 1 MHz piezo-ceramic transducer with a matching layer to air sends a chirped US signal centered at 1 MHz to a 1.6 mm thick gelatin phantom mimicking soft biological tissue. A phase-sensitive (PhS)-optical coherence tomography system is used to track/image the mechanical wave. The reconstructed transient displacement of the mechanical wave in space and time demonstrates highly efficient generation, thus offering great promise for non-contact, non-invasive characterization of soft media, in general, and for elasticity measurements in delicate soft tissues and organs in bio-medicine, in particular.

Microbial community analysis of anaerobic reactors treating soft drink wastewater.

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Takashi Narihiro

Full Text Available The anaerobic packed-bed (AP and hybrid packed-bed (HP reactors containing methanogenic microbial consortia were applied to treat synthetic soft drink wastewater, which contains polyethylene glycol (PEG and fructose as the primary constituents. The AP and HP reactors achieved high COD removal efficiency (>95% after 80 and 33 days of the operation, respectively, and operated stably over 2 years. 16S rRNA gene pyrotag analyses on a total of 25 biofilm samples generated 98,057 reads, which were clustered into 2,882 operational taxonomic units (OTUs. Both AP and HP communities were predominated by Bacteroidetes, Chloroflexi, Firmicutes, and candidate phylum KSB3 that may degrade organic compound in wastewater treatment processes. Other OTUs related to uncharacterized Geobacter and Spirochaetes clades and candidate phylum GN04 were also detected at high abundance; however, their relationship to wastewater treatment has remained unclear. In particular, KSB3, GN04, Bacteroidetes, and Chloroflexi are consistently associated with the organic loading rate (OLR increase to 1.5 g COD/L-d. Interestingly, KSB3 and GN04 dramatically decrease in both reactors after further OLR increase to 2.0 g COD/L-d. These results indicate that OLR strongly influences microbial community composition. This suggests that specific uncultivated taxa may take central roles in COD removal from soft drink wastewater depending on OLR.

Seasonal Changes in Microbial Community Structure in Freshwater Stream Sediment in a North Carolina River Basin

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John P. Bucci

2014-01-01

Full Text Available This study examined seasonal differences in microbial community structure in the sediment of three streams in North Carolina’s Neuse River Basin. Microbes that reside in sediment are at the base of the food chain and have a profound influence on the health of freshwater stream environments. Terminal-Restriction Fragment Length Polymorphism (T-RFLP, molecular fingerprint analysis of 16S rRNA genes was used to examine the diversity of bacterial species in stream sediment. Sediment was sampled in both wet and dry seasons from an agricultural (Bear, mixed urban (Crabtree and forested (Marks Creek, and the microbiota examined. Gamma, Alpha and Beta proteobacteria were prevalent species of microbial taxa represented among all sites. Actinobacteria was the next most prevalent species observed, with greater occurrence in dry compared to the wet season. Discernable clustering was observed of Marks and Bear Creek samples collected during the wetter period (September–April, which corresponded with a period of higher precipitation and cooler surface water temperatures. Although not statistically significant, microbial community structure appeared different between season (ANOSIM, R = 0.60; p < 0.10. Principal components analysis confirmed this pattern and showed that the bacterial groups were separated by wet and dry seasonal periods. These results suggest seasonal differences among the microbial community structure in sediment of freshwater streams and that these communities may respond to changes in precipitation during wetter periods.

Planning for a soft landing : non-renewable resource development and community infrastructure in the Northwest Territories

International Nuclear Information System (INIS)